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1 -rw-r--r--···0········0········0········4·2025-08-30·20:26:24.000000·debian-binary1 -rw-r--r--···0········0········0········4·2025-08-30·20:26:24.000000·debian-binary
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1 Package:·gromacs-data1 Package:·gromacs-data
2 Source:·gromacs2 Source:·gromacs
3 Version:·2025.3-13 Version:·2025.3-1
4 Architecture:·all4 Architecture:·all
5 Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org>5 Maintainer:·Debichem·Team·<debichem-devel@lists.alioth.debian.org>
6 Installed-Size:·3291366 Installed-Size:·329143
7 Depends:·libjs-mathjax7 Depends:·libjs-mathjax
8 Recommends:·gromacs8 Recommends:·gromacs
9 Section:·science9 Section:·science
10 Priority:·optional10 Priority:·optional
11 Multi-Arch:·foreign11 Multi-Arch:·foreign
12 Homepage:·https://www.gromacs.org/12 Homepage:·https://www.gromacs.org/
13 Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation13 Description:·GROMACS·molecular·dynamics·sim,·data·and·documentation
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74 </div><!--·top·-->74 </div><!--·top·-->
75 <div><div·class="header">75 <div><div·class="header">
76 ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div>76 ··<div·class="headertitle"><div·class="title">Module·dependency·graph</div></div>
77 </div><!--header-->77 </div><!--header-->
78 <div·class="contents">78 <div·class="contents">
79 <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p>79 <div·class="textblock"><p>The·graph·below·shows·the·dependencies·between·the·source·code·modules,·computed·from·include·statements·in·the·code.·For·documented·modules·(those·that·do·not·have·a·gray·background),·clicking·on·the·module·takes·you·to·the·module·documentation.·Legend·for·the·graph·can·be·found·below·the·graph.</p>
80 <div·class="dotgraph">80 <div·class="dotgraph">
81 <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3752"·height="1712"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>81 <iframe·scrolling="no"·frameborder="0"·src="dot_module-deps.svg"·width="3855"·height="1712"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>
82 ·<h1><a·class="anchor"·id="autotoc_md49"></a>82 ·<h1><a·class="anchor"·id="autotoc_md49"></a>
83 Legend</h1>83 Legend</h1>
84 <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p>84 <p>The·graph·below·annotates·the·colors·and·line·styles·used·in·the·module·dependency·graph·above.·More·detailed·textual·annotation·is·below·the·graph.</p>
85 <div·class="dotgraph">85 <div·class="dotgraph">
86 <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>86 <iframe·scrolling="no"·frameborder="0"·src="dot_inline_dotgraph_2.svg"·width="440"·height="407"><p><b>This·browser·is·not·able·to·show·SVG:·try·Firefox,·Chrome,·Safari,·or·Opera·instead.</b></p></iframe></div>
87 <p>Node·colors:·</p><dl>87 <p>Node·colors:·</p><dl>
88 <dt>gray·background·</dt>88 <dt>gray·background·</dt>
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150 ····['management_20commandline_109',·['Command·Line·Program·Management·(commandline)',·['../group__module__commandline.xhtml',·1,·'']]],150 ····['management_20commandline_109',·['Command·Line·Program·Management·(commandline)',·['../group__module__commandline.xhtml',·1,·'']]],
151 ····['manager_110',·['manager',·['../page_wrapperbinary.xhtml#section_wrapperbinary_manager',·1,·'Command·line·manager'],151 ····['manager_110',·['manager',·['../page_wrapperbinary.xhtml#section_wrapperbinary_manager',·1,·'Command·line·manager'],
152 ········['../classgmx_1_1test_1_1CommandLineModuleManagerTestBase.xhtml#a4b476b8e0f4a76c7ceeed026734ea8dd',·1,·'gmx::test::CommandLineModuleManagerTestBase::manager()'],152 ········['../classgmx_1_1test_1_1CommandLineModuleManagerTestBase.xhtml#a4b476b8e0f4a76c7ceeed026734ea8dd',·1,·'gmx::test::CommandLineModuleManagerTestBase::manager()'],
153 ········['../page_modularsimulator.xhtml#autotoc_md48',·1,·'Reference·temperature·manager']153 ········['../page_modularsimulator.xhtml#autotoc_md48',·1,·'Reference·temperature·manager']
154 ····]],154 ····]],
155 ····['manager_2ecpp_111',·['manager.cpp',·['../manager_8cpp.xhtml',·1,·'']]],155 ····['manager_2ecpp_111',·['manager.cpp',·['../manager_8cpp.xhtml',·1,·'']]],
156 ····['manager_2eh_112',·['manager.h',·['../manager_8h.xhtml',·1,·'']]],156 ····['manager_2eh_112',·['manager.h',·['../manager_8h.xhtml',·1,·'']]],
157 ····['managers_5f_113',·['managers_',·['../classgmx_1_1internal_1_1OptionsImpl.xhtml#ac6b12c0ab7bd35f3223562488836479f',·1,·'gmx::internal::OptionsImpl::managers_'], 
158 ········['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#a83daffc3bbc78602b537d5968aa89fb2',·1,·'gmx::internal::OptionSectionImpl::managers_']157 ····['managers_5f_113',·['managers_',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#a83daffc3bbc78602b537d5968aa89fb2',·1,·'gmx::internal::OptionSectionImpl::managers_'],
 158 ········['../classgmx_1_1internal_1_1OptionsImpl.xhtml#ac6b12c0ab7bd35f3223562488836479f',·1,·'gmx::internal::OptionsImpl::managers_']
159 ····]],159 ····]],
160 ····['managesyncwithppcoordinatesendergpu_114',·['manageSyncWithPpCoordinateSenderGpu',·['../pme__gpu__internal_8cpp.xhtml#a34f7471640b60d9b19ed1fba0a0e6934',·1,·'pme_gpu_internal.cpp']]],160 ····['managesyncwithppcoordinatesendergpu_114',·['manageSyncWithPpCoordinateSenderGpu',·['../pme__gpu__internal_8cpp.xhtml#a34f7471640b60d9b19ed1fba0a0e6934',·1,·'pme_gpu_internal.cpp']]],
161 ····['manualoutputfile_115',·['ManualOutputFile',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}']]],161 ····['manualoutputfile_115',·['ManualOutputFile',·['../structgmx_1_1test_1_1anonymous__namespace_02extract__cluster_8cpp_03_1_1ManualOutputFile.xhtml',·1,·'gmx::test::anonymous_namespace{extract_cluster.cpp}']]],
162 ····['many_5fauto_5fcorrel_116',·['many_auto_correl',·['../manyautocorrelation_8cpp.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector&lt;·std::vector&lt;·real·&gt;·&gt;·*c):&#160;manyautocorrelation.cpp'],162 ····['many_5fauto_5fcorrel_116',·['many_auto_correl',·['../manyautocorrelation_8h.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector&lt;·std::vector&lt;·real·&gt;·&gt;·*c):&#160;manyautocorrelation.cpp'],
163 ········['../manyautocorrelation_8h.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector&lt;·std::vector&lt;·real·&gt;·&gt;·*c):&#160;manyautocorrelation.cpp']163 ········['../manyautocorrelation_8cpp.xhtml#ad3b9966ff6279f6316c3c898e31f0dee',·1,·'many_auto_correl(std::vector&lt;·std::vector&lt;·real·&gt;·&gt;·*c):&#160;manyautocorrelation.cpp']
164 ····]],164 ····]],
165 ····['many_5fcross_5fcorr_117',·['many_cross_corr',·['../crosscorr_8cpp.xhtml#a953d512f8171310c10a4d0f4121d1a33',·1,·'many_cross_corr(int·nFunc,·int·*nData,·real·**f,·real·**g,·real·**corr):&#160;crosscorr.cpp'],165 ····['many_5fcross_5fcorr_117',·['many_cross_corr',·['../crosscorr_8cpp.xhtml#a953d512f8171310c10a4d0f4121d1a33',·1,·'many_cross_corr(int·nFunc,·int·*nData,·real·**f,·real·**g,·real·**corr):&#160;crosscorr.cpp'],
166 ········['../crosscorr_8h.xhtml#a953d512f8171310c10a4d0f4121d1a33',·1,·'many_cross_corr(int·nFunc,·int·*nData,·real·**f,·real·**g,·real·**corr):&#160;crosscorr.cpp']166 ········['../crosscorr_8h.xhtml#a953d512f8171310c10a4d0f4121d1a33',·1,·'many_cross_corr(int·nFunc,·int·*nData,·real·**f,·real·**g,·real·**corr):&#160;crosscorr.cpp']
167 ····]],167 ····]],
168 ····['manyautocorrelation_2ecpp_118',·['manyautocorrelation.cpp',·['../manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)'],168 ····['manyautocorrelation_2ecpp_118',·['manyautocorrelation.cpp',·['../tests_2manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)'],
169 ········['../tests_2manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)']169 ········['../manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)']
170 ····]],170 ····]],
171 ····['manyautocorrelation_2eh_119',·['manyautocorrelation.h',·['../manyautocorrelation_8h.xhtml',·1,·'']]],171 ····['manyautocorrelation_2eh_119',·['manyautocorrelation.h',·['../manyautocorrelation_8h.xhtml',·1,·'']]],
172 ····['map_120',·['map',·['../structt__matrix.xhtml#a4cfcb489019e79bf56990ce36cefe00f',·1,·'t_matrix']]],172 ····['map_120',·['map',·['../structt__matrix.xhtml#a4cfcb489019e79bf56990ce36cefe00f',·1,·'t_matrix']]],
173 ····['mapb_121',·['mapb',·['../structgmx__ana__indexmap__t.xhtml#aabf74268915bc1a13aaaa95c236d5e08',·1,·'gmx_ana_indexmap_t']]],173 ····['mapb_121',·['mapb',·['../structgmx__ana__indexmap__t.xhtml#aabf74268915bc1a13aaaa95c236d5e08',·1,·'gmx_ana_indexmap_t']]],
174 ····['mapconstiterator_122',·['MapConstIterator',·['../classgmx_1_1EnergyFrame.xhtml#a5b3ca67a8497cc2cf77f3c0da771fa95',·1,·'gmx::EnergyFrame']]],174 ····['mapconstiterator_122',·['MapConstIterator',·['../classgmx_1_1EnergyFrame.xhtml#a5b3ca67a8497cc2cf77f3c0da771fa95',·1,·'gmx::EnergyFrame']]],
175 ····['mapgridtodatagrid_123',·['mapGridToDataGrid',·['../namespacegmx.xhtml#ad49aba237e75034450c40885fccde22c',·1,·'gmx']]],175 ····['mapgridtodatagrid_123',·['mapGridToDataGrid',·['../namespacegmx.xhtml#ad49aba237e75034450c40885fccde22c',·1,·'gmx']]],
176 ····['mapid_124',·['mapid',·['../structgmx__ana__indexmap__t.xhtml#a2675a18d204f864f94da0d616c115884',·1,·'gmx_ana_indexmap_t']]],176 ····['mapid_124',·['mapid',·['../structgmx__ana__indexmap__t.xhtml#a2675a18d204f864f94da0d616c115884',·1,·'gmx_ana_indexmap_t']]],
177 ····['mapnameformatterstoparameters_125',·['mapNameFormattersToParameters',·['../naming_8h.xhtml#a8152d9167617d92ebbc1c23f7af65108',·1,·'gmx::test::detail']]],177 ····['mapnameformatterstoparameters_125',·['mapNameFormattersToParameters',·['../naming_8h.xhtml#a8152d9167617d92ebbc1c23f7af65108',·1,·'gmx::test::detail']]],
178 ····['mappedid_126',·['mappedId',·['../classgmx_1_1SelectionPosition.xhtml#a9b2a183cd94c03a9aabe10c89e73648b',·1,·'gmx::SelectionPosition']]],178 ····['mappedid_126',·['mappedId',·['../classgmx_1_1SelectionPosition.xhtml#a9b2a183cd94c03a9aabe10c89e73648b',·1,·'gmx::SelectionPosition']]],
179 ····['mappedids_127',·['mappedIds',·['../classgmx_1_1Selection.xhtml#a44d2c2cd4db4eade34cac95f5916a2a0',·1,·'gmx::Selection']]],179 ····['mappedids_127',·['mappedIds',·['../classgmx_1_1Selection.xhtml#a44d2c2cd4db4eade34cac95f5916a2a0',·1,·'gmx::Selection']]],
180 ····['mappedunionfinder_128',·['MappedUnionFinder',·['../classgmx_1_1MappedUnionFinder.xhtml',·1,·'gmx']]],180 ····['mappedunionfinder_128',·['MappedUnionFinder',·['../classgmx_1_1MappedUnionFinder.xhtml',·1,·'gmx']]],
181 ····['mapping_129',·['mapping',·['../classgmx_1_1basic__mdspan.xhtml#a02c710cacde0166f1c5f4c67b9971cee',·1,·'gmx::basic_mdspan::mapping()'],181 ····['mapping_129',·['mapping',·['../classgmx_1_1layout__right_1_1mapping.xhtml#a80905ecdaf35273d7f7c303e7d2ff909',·1,·'gmx::layout_right::mapping::mapping()'],
182 ········['../classgmx_1_1layout__right_1_1mapping.xhtml',·1,·'gmx::layout_right::mapping&lt;·Extents·&gt;'],182 ········['../classgmx_1_1layout__right_1_1mapping.xhtml',·1,·'gmx::layout_right::mapping&lt;·Extents·&gt;'],
183 ········['../classgmx_1_1layout__right_1_1mapping.xhtml#a7aa3312a770a6a3946d60a7e23cb2002',·1,·'gmx::layout_right::mapping::mapping(const·Extents·&amp;ext)·noexcept'],183 ········['../classgmx_1_1layout__right_1_1mapping.xhtml#a7aa3312a770a6a3946d60a7e23cb2002',·1,·'gmx::layout_right::mapping::mapping()'],
184 ········['../classgmx_1_1layout__right_1_1mapping.xhtml#ad632683c77288c28df614ea7915917ce',·1,·'gmx::layout_right::mapping::mapping(const·mapping·&amp;)·noexcept=default'],184 ········['../classgmx_1_1basic__mdspan.xhtml#a02c710cacde0166f1c5f4c67b9971cee',·1,·'gmx::basic_mdspan::mapping()'],
185 ········['../classgmx_1_1layout__right_1_1mapping.xhtml#afc7b2299be673f6d37d0a570e061da72',·1,·'gmx::layout_right::mapping::mapping(mapping·&amp;&amp;)·noexcept=default'],185 ········['../classgmx_1_1layout__right_1_1mapping.xhtml#afc7b2299be673f6d37d0a570e061da72',·1,·'gmx::layout_right::mapping::mapping(mapping·&amp;&amp;)·noexcept=default'],
186 ········['../classgmx_1_1layout__right_1_1mapping.xhtml#a80905ecdaf35273d7f7c303e7d2ff909',·1,·'gmx::layout_right::mapping::mapping()·noexcept=default']186 ········['../classgmx_1_1layout__right_1_1mapping.xhtml#ad632683c77288c28df614ea7915917ce',·1,·'gmx::layout_right::mapping::mapping(const·mapping·&amp;)·noexcept=default']
187 ····]],187 ····]],
188 ····['mapping_5ftype_130',·['mapping_type',·['../classgmx_1_1basic__mdspan.xhtml#a41c0126e07c9b922b4b838b578af7888',·1,·'gmx::basic_mdspan']]],188 ····['mapping_5ftype_130',·['mapping_type',·['../classgmx_1_1basic__mdspan.xhtml#a41c0126e07c9b922b4b838b578af7888',·1,·'gmx::basic_mdspan']]],
189 ····['maptoframeatoms_5f_131',·['mapToFrameAtoms_',·['../classgmx_1_1PositionCalculationCollection_1_1Impl.xhtml#a028b638ac6bf4c5c76f4c78819d94cff',·1,·'gmx::PositionCalculationCollection::Impl']]],189 ····['maptoframeatoms_5f_131',·['mapToFrameAtoms_',·['../classgmx_1_1PositionCalculationCollection_1_1Impl.xhtml#a028b638ac6bf4c5c76f4c78819d94cff',·1,·'gmx::PositionCalculationCollection::Impl']]],
190 ····['maptype_132',·['MapType',·['../classgmx_1_1EnergyFrame.xhtml#ae7cbc6aabfeacd2447563d8f137045f4',·1,·'gmx::EnergyFrame']]],190 ····['maptype_132',·['MapType',·['../classgmx_1_1EnergyFrame.xhtml#ae7cbc6aabfeacd2447563d8f137045f4',·1,·'gmx::EnergyFrame']]],
191 ····['mark_5fsubexpr_5fdynamic_133',·['mark_subexpr_dynamic',·['../compiler_8cpp.xhtml#a2ce676e6caff3877910cd9cfc27cb955',·1,·'compiler.cpp']]],191 ····['mark_5fsubexpr_5fdynamic_133',·['mark_subexpr_dynamic',·['../compiler_8cpp.xhtml#a2ce676e6caff3877910cd9cfc27cb955',·1,·'compiler.cpp']]],
192 ····['mark_5fsurface_5fcovered_134',·['mark_surface_covered',·['../sm__insolidangle_8cpp.xhtml#ad016ba6ae3e4a77948222f08f4004e4f',·1,·'sm_insolidangle.cpp']]],192 ····['mark_5fsurface_5fcovered_134',·['mark_surface_covered',·['../sm__insolidangle_8cpp.xhtml#ad016ba6ae3e4a77948222f08f4004e4f',·1,·'sm_insolidangle.cpp']]],
193 ····['markasreadytoreduce_135',·['markAsReadyToReduce',·['../classgmx_1_1ObservablesReducer.xhtml#aa76fb912aca1c30275e567685626f515',·1,·'gmx::ObservablesReducer']]],193 ····['markasreadytoreduce_135',·['markAsReadyToReduce',·['../classgmx_1_1ObservablesReducer.xhtml#aa76fb912aca1c30275e567685626f515',·1,·'gmx::ObservablesReducer']]],
194 ····['markasset_136',·['markAsSet',·['../classgmx_1_1AbstractOptionStorage.xhtml#af02f972186bba8ff52f0e789e7d6fedc',·1,·'gmx::AbstractOptionStorage']]],194 ····['markasset_136',·['markAsSet',·['../classgmx_1_1AbstractOptionStorage.xhtml#af02f972186bba8ff52f0e789e7d6fedc',·1,·'gmx::AbstractOptionStorage']]],
195 ····['marknotified_137',·['markNotified',·['../classgmx_1_1internal_1_1AnalysisDataStorageFrameData.xhtml#a2e4ff0da40c2d126b1dd4539cc1d8d99',·1,·'gmx::internal::AnalysisDataStorageFrameData']]],195 ····['marknotified_137',·['markNotified',·['../classgmx_1_1internal_1_1AnalysisDataStorageFrameData.xhtml#a2e4ff0da40c2d126b1dd4539cc1d8d99',·1,·'gmx::internal::AnalysisDataStorageFrameData']]],
196 ····['markup_138',·['markup',·['../page_onlinehelp.xhtml#autotoc_md91',·1,·'Formatting·markup'],196 ····['markup_138',·['markup',·['../page_onlinehelp.xhtml#autotoc_md91',·1,·'Formatting·markup'],
197 ········['../page_onlinehelp.xhtml#autotoc_md93',·1,·'GROMACS-specific·markup']197 ········['../page_onlinehelp.xhtml#autotoc_md93',·1,·'GROMACS-specific·markup']
198 ····]],198 ····]],
199 ····['mask_139',·['mask',·['../classgmx_1_1test_1_1AllocatorTest.xhtml#a3b860b1af26fe4dce4d932a100a1d1ab',·1,·'gmx::test::AllocatorTest']]],199 ····['mask_139',·['mask',·['../classgmx_1_1test_1_1AllocatorTest.xhtml#a3b860b1af26fe4dce4d932a100a1d1ab',·1,·'gmx::test::AllocatorTest']]],
200 ····['maskadd_140',·['maskadd',·['../namespacegmx.xhtml#a0178a127dde331652ab015323ae622f2',·1,·'gmx::maskAdd(float·a,·float·b,·float·m)'], 
201 ········['../group__module__simd.xhtml#ga766a313a4a158cfcb0eed0373dd82dfc',·1,·'gmx::maskAdd(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'],200 ····['maskadd_140',·['maskadd',·['../group__module__simd.xhtml#ga766a313a4a158cfcb0eed0373dd82dfc',·1,·'gmx::maskAdd(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'],
 201 ········['../namespacegmx.xhtml#a0178a127dde331652ab015323ae622f2',·1,·'gmx::maskAdd(float·a,·float·b,·float·m)'],
 202 ········['../namespacegmx.xhtml#a68b090d0e3ab5695c508453406ee43c8',·1,·'gmx::maskAdd(double·a,·double·b,·double·m)'],
202 ········['../group__module__simd.xhtml#gadab86e04bd62248ab68039d8983a9206',·1,·'gmx::maskAdd(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)'],203 ········['../group__module__simd.xhtml#gadab86e04bd62248ab68039d8983a9206',·1,·'gmx::maskAdd(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)']
203 ········['../namespacegmx.xhtml#a68b090d0e3ab5695c508453406ee43c8',·1,·'gmx::maskAdd(double·a,·double·b,·double·m)'] 
204 ····]],204 ····]],
205 ····['maskarray_141',·['maskarray',·['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsHalfISize_01_4.xhtml#aa09948a382ac9009e878a3bf5081abd5',·1,·'gmx::DiagonalMasker&lt;·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsHalfISize·&gt;::maskArray()'],205 ····['maskarray_141',·['maskarray',·['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsHalfISize_01_4.xhtml#aa09948a382ac9009e878a3bf5081abd5',·1,·'gmx::DiagonalMasker&lt;·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsHalfISize·&gt;::maskArray()'],
206 ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeEqualsISize_01_4.xhtml#a42fcf1ef011c98c6dca2d5fb14a4ff53',·1,·'gmx::DiagonalMasker&lt;·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeEqualsISize·&gt;::maskArray()'], 
207 ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsDoubleISize_01_4.xhtml#a45e2188c94bad5c65ddfbf1802dd7a81',·1,·'gmx::DiagonalMasker&lt;·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsDoubleISize·&gt;::maskArray()']206 ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeIsDoubleISize_01_4.xhtml#a45e2188c94bad5c65ddfbf1802dd7a81',·1,·'gmx::DiagonalMasker&lt;·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeIsDoubleISize·&gt;::maskArray()'],
 207 ········['../classgmx_1_1DiagonalMasker_3_01nR_00_01kernelLayout_00_01KernelLayoutClusterRatio_1_1JSizeEqualsISize_01_4.xhtml#a42fcf1ef011c98c6dca2d5fb14a4ff53',·1,·'gmx::DiagonalMasker&lt;·nR,·kernelLayout,·KernelLayoutClusterRatio::JSizeEqualsISize·&gt;::maskArray()']
208 ····]],208 ····]],
209 ····['maskzfma_142',·['maskzfma',·['../namespacegmx.xhtml#a8151e61ef06e30e360c03bba6fb5e2ab',·1,·'gmx::maskzFma(float·a,·float·b,·float·c,·float·m)'],209 ····['maskzfma_142',·['maskzfma',·['../group__module__simd.xhtml#gaaa689a6c17b1d60d62b6fcd51daa7639',·1,·'gmx::maskzFma(SimdDouble·a,·SimdDouble·b,·SimdDouble·c,·SimdDBool·m)'],
210 ········['../group__module__simd.xhtml#gac21c886b9883657fd67d8b48e784af2d',·1,·'gmx::maskzFma(SimdFloat·a,·SimdFloat·b,·SimdFloat·c,·SimdFBool·m)'],210 ········['../group__module__simd.xhtml#gac21c886b9883657fd67d8b48e784af2d',·1,·'gmx::maskzFma(SimdFloat·a,·SimdFloat·b,·SimdFloat·c,·SimdFBool·m)'],
 211 ········['../namespacegmx.xhtml#a8151e61ef06e30e360c03bba6fb5e2ab',·1,·'gmx::maskzFma(float·a,·float·b,·float·c,·float·m)'],
211 ········['../namespacegmx.xhtml#aa3cf4eaad108887d2462f5beecd4db62',·1,·'gmx::maskzFma(double·a,·double·b,·double·c,·double·m)'],212 ········['../namespacegmx.xhtml#aa3cf4eaad108887d2462f5beecd4db62',·1,·'gmx::maskzFma(double·a,·double·b,·double·c,·double·m)']
212 ········['../group__module__simd.xhtml#gaaa689a6c17b1d60d62b6fcd51daa7639',·1,·'gmx::maskzFma(SimdDouble·a,·SimdDouble·b,·SimdDouble·c,·SimdDBool·m)'] 
213 ····]],213 ····]],
 214 ····['maskzinv_143',·['maskzinv',·['../namespacegmx.xhtml#a582d71ff8e7d51cbd2386e29935e89ef',·1,·'gmx::maskzInv(float·x,·bool·m)'],
214 ····['maskzinv_143',·['maskzinv',·['../namespacegmx.xhtml#af5cc89f64ab845f88816a9cbb16d467c',·1,·'gmx::maskzInv(double·x,·bool·m)'],215 ········['../namespacegmx.xhtml#af5cc89f64ab845f88816a9cbb16d467c',·1,·'gmx::maskzInv(double·x,·bool·m)']
215 ········['../namespacegmx.xhtml#a582d71ff8e7d51cbd2386e29935e89ef',·1,·'gmx::maskzInv(float·x,·bool·m)'] 
216 ····]],216 ····]],
217 ····['maskzinvsingleaccuracy_144',·['maskzInvSingleAccuracy',·['../namespacegmx.xhtml#a2433c82892495a73bf41de15f5e8908f',·1,·'gmx']]],217 ····['maskzinvsingleaccuracy_144',·['maskzInvSingleAccuracy',·['../namespacegmx.xhtml#a2433c82892495a73bf41de15f5e8908f',·1,·'gmx']]],
 218 ····['maskzinvsqrt_145',·['maskzinvsqrt',·['../namespacegmx.xhtml#aa182f9ceead92b3055e6ae5903994651',·1,·'gmx::maskzInvsqrt(float·x,·bool·m)'],
218 ····['maskzinvsqrt_145',·['maskzinvsqrt',·['../namespacegmx.xhtml#aa5b5a9766964a2b854f493fd783bb63d',·1,·'gmx::maskzInvsqrt(double·x,·bool·m)'],219 ········['../namespacegmx.xhtml#aa5b5a9766964a2b854f493fd783bb63d',·1,·'gmx::maskzInvsqrt(double·x,·bool·m)']
219 ········['../namespacegmx.xhtml#aa182f9ceead92b3055e6ae5903994651',·1,·'gmx::maskzInvsqrt(float·x,·bool·m)'] 
220 ····]],220 ····]],
221 ····['maskzinvsqrtsingleaccuracy_146',·['maskzInvsqrtSingleAccuracy',·['../namespacegmx.xhtml#a1fdaf91102db0bfbc6fd440524b15199',·1,·'gmx']]],221 ····['maskzinvsqrtsingleaccuracy_146',·['maskzInvsqrtSingleAccuracy',·['../namespacegmx.xhtml#a1fdaf91102db0bfbc6fd440524b15199',·1,·'gmx']]],
222 ····['maskzmul_147',·['maskzmul',·['../namespacegmx.xhtml#a7e4ab8b1ab046ff242d32ab93366bfde',·1,·'gmx::maskzMul(double·a,·double·b,·double·m)'], 
223 ········['../namespacegmx.xhtml#a1e3c4084e25d298f95003df8e9aeffa1',·1,·'gmx::maskzMul(float·a,·float·b,·float·m)'],222 ····['maskzmul_147',·['maskzmul',·['../namespacegmx.xhtml#a1e3c4084e25d298f95003df8e9aeffa1',·1,·'gmx::maskzMul(float·a,·float·b,·float·m)'],
 223 ········['../group__module__simd.xhtml#gafb416d879be4463f38af9b670583fd65',·1,·'gmx::maskzMul(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)'],
224 ········['../group__module__simd.xhtml#gaa732ce9ab59cca63f834923a8cb4c775',·1,·'gmx::maskzMul(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'],224 ········['../group__module__simd.xhtml#gaa732ce9ab59cca63f834923a8cb4c775',·1,·'gmx::maskzMul(SimdFloat·a,·SimdFloat·b,·SimdFBool·m)'],
225 ········['../group__module__simd.xhtml#gafb416d879be4463f38af9b670583fd65',·1,·'gmx::maskzMul(SimdDouble·a,·SimdDouble·b,·SimdDBool·m)']225 ········['../namespacegmx.xhtml#a7e4ab8b1ab046ff242d32ab93366bfde',·1,·'gmx::maskzMul(double·a,·double·b,·double·m)']
226 ····]],226 ····]],
227 ····['maskzrcp_148',·['maskzrcp',·['../namespacegmx.xhtml#a46aa2887b65705f41a4f99028391e06d',·1,·'gmx::maskzRcp(double·x,·double·m)'],227 ····['maskzrcp_148',·['maskzrcp',·['../namespacegmx.xhtml#a46aa2887b65705f41a4f99028391e06d',·1,·'gmx::maskzRcp(double·x,·double·m)'],
228 ········['../namespacegmx.xhtml#a5e2078ca9735b86c8414dc80273c330f',·1,·'gmx::maskzRcp(float·x,·float·m)'],228 ········['../namespacegmx.xhtml#a5e2078ca9735b86c8414dc80273c330f',·1,·'gmx::maskzRcp(float·x,·float·m)'],
229 ········['../group__module__simd.xhtml#gabda785f716b1445f709fc7aa028c0589',·1,·'gmx::maskzRcp(SimdFloat·x,·SimdFBool·m)'],229 ········['../group__module__simd.xhtml#gabda785f716b1445f709fc7aa028c0589',·1,·'gmx::maskzRcp(SimdFloat·x,·SimdFBool·m)'],
230 ········['../group__module__simd.xhtml#ga0f425368efd0895189b0e11d4b5d4ccc',·1,·'gmx::maskzRcp(SimdDouble·x,·SimdDBool·m)']230 ········['../group__module__simd.xhtml#ga0f425368efd0895189b0e11d4b5d4ccc',·1,·'gmx::maskzRcp(SimdDouble·x,·SimdDBool·m)']
231 ····]],231 ····]],
232 ····['maskzrsqrt_149',·['maskzrsqrt',·['../group__module__simd.xhtml#ga6eb1ba8851b08ceea1c160b6b255ee9b',·1,·'gmx::maskzRsqrt(SimdFloat·x,·SimdFBool·m)'],232 ····['maskzrsqrt_149',·['maskzrsqrt',·['../group__module__simd.xhtml#ga6eb1ba8851b08ceea1c160b6b255ee9b',·1,·'gmx::maskzRsqrt(SimdFloat·x,·SimdFBool·m)'],
Offset 263, 29 lines modifiedOffset 263, 29 lines modified
263 ····]],263 ····]],
264 ····['matrix3x3constspan_165',·['Matrix3x3ConstSpan',·['../namespacegmx.xhtml#a589179a4042893247bfe78e630ee381f',·1,·'gmx']]],264 ····['matrix3x3constspan_165',·['Matrix3x3ConstSpan',·['../namespacegmx.xhtml#a589179a4042893247bfe78e630ee381f',·1,·'gmx']]],
265 ····['matrix3x3span_166',·['Matrix3x3Span',·['../namespacegmx.xhtml#a42b7945e249b8dd5a00cd733e679c2a9',·1,·'gmx']]],265 ····['matrix3x3span_166',·['Matrix3x3Span',·['../namespacegmx.xhtml#a42b7945e249b8dd5a00cd733e679c2a9',·1,·'gmx']]],
266 ····['matrix3x3tostring_167',·['Matrix3x3ToString',·['../structgmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03_1_1Matrix3x3ToString.xhtml',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],266 ····['matrix3x3tostring_167',·['Matrix3x3ToString',·['../structgmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03_1_1Matrix3x3ToString.xhtml',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],
267 ····['matrix_5f_168',·['matrix_',·['../structgmx_1_1MrcDensitySkewData.xhtml#a8341d52116450b5e201979b68356df03',·1,·'gmx::MrcDensitySkewData']]],267 ····['matrix_5f_168',·['matrix_',·['../structgmx_1_1MrcDensitySkewData.xhtml#a8341d52116450b5e201979b68356df03',·1,·'gmx::MrcDensitySkewData']]],
268 ····['matrix_5fconvert_169',·['matrix_convert',·['../pbc_8cpp.xhtml#aec6c71950b4b9e1c90429eff68ea4168',·1,·'pbc.cpp']]],268 ····['matrix_5fconvert_169',·['matrix_convert',·['../pbc_8cpp.xhtml#aec6c71950b4b9e1c90429eff68ea4168',·1,·'pbc.cpp']]],
269 ····['matrixvectormultiply_170',·['matrixVectorMultiply',·['../namespacegmx.xhtml#a2f6cbfad1dad185c82ec9bee081833c5',·1,·'gmx']]],269 ····['matrixvectormultiply_170',·['matrixVectorMultiply',·['../namespacegmx.xhtml#a2f6cbfad1dad185c82ec9bee081833c5',·1,·'gmx']]],
270 ····['max_171',·['max',·['../group__module__simd.xhtml#ga4edeef3c458f5c77cf3ceb80532a57ff',·1,·'gmx::max()'], 
271 ········['../classgmx_1_1UniformRealDistribution.xhtml#abf888030231e57e8c412cecd63f70f78',·1,·'gmx::UniformRealDistribution::max()'], 
272 ········['../classgmx_1_1UniformIntDistribution.xhtml#af3bf0caf1c448e8f298a0d2b60b34733',·1,·'gmx::UniformIntDistribution::max()'], 
273 ········['../classgmx_1_1ThreeFry2x64General.xhtml#a747866a072cff89a20b8f58621ae4bc5',·1,·'gmx::ThreeFry2x64General::max()'],270 ····['max_171',·['max',·['../classgmx_1_1ThreeFry2x64General.xhtml#a747866a072cff89a20b8f58621ae4bc5',·1,·'gmx::ThreeFry2x64General::max()'],
274 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#a445e2fab20c2f008fd972f5e96cd8b68',·1,·'gmx::TabulatedNormalDistribution::max()'],271 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#a445e2fab20c2f008fd972f5e96cd8b68',·1,·'gmx::TabulatedNormalDistribution::max()'],
275 ········['../classgmx_1_1NormalDistribution.xhtml#aba294339d0eec4d12a1019d24848f0b9',·1,·'gmx::NormalDistribution::max()'],272 ········['../classgmx_1_1NormalDistribution.xhtml#aba294339d0eec4d12a1019d24848f0b9',·1,·'gmx::NormalDistribution::max()'],
276 ········['../classgmx_1_1GammaDistribution.xhtml#af043df37641bf3c31adc4b46164ef94c',·1,·'gmx::GammaDistribution::max()'],273 ········['../classgmx_1_1GammaDistribution.xhtml#af043df37641bf3c31adc4b46164ef94c',·1,·'gmx::GammaDistribution::max()'],
277 ········['../classgmx_1_1ExponentialDistribution.xhtml#a5db77b73c9d84977cd6a1e93427abb6b',·1,·'gmx::ExponentialDistribution::max()'],274 ········['../classgmx_1_1ExponentialDistribution.xhtml#a5db77b73c9d84977cd6a1e93427abb6b',·1,·'gmx::ExponentialDistribution::max()'],
278 ········['../structgmx_1_1BoundingBox_1_1Corner.xhtml#a41d9f565256e2af79951232a328ce054',·1,·'gmx::BoundingBox::Corner::max()'],275 ········['../structgmx_1_1BoundingBox_1_1Corner.xhtml#a41d9f565256e2af79951232a328ce054',·1,·'gmx::BoundingBox::Corner::max()'],
279 ········['../group__module__simd.xhtml#ga3c66081dde9666200461f364725a4085',·1,·'gmx::max(Simd4Float·a,·Simd4Float·b)'],276 ········['../classgmx_1_1UniformIntDistribution.xhtml#af3bf0caf1c448e8f298a0d2b60b34733',·1,·'gmx::UniformIntDistribution::max()'],
 277 ········['../classgmx_1_1UniformRealDistribution.xhtml#abf888030231e57e8c412cecd63f70f78',·1,·'gmx::UniformRealDistribution::max()'],
280 ········['../namespacegmx.xhtml#a16f6bf4a20b14262f28168596d5bb8b9',·1,·'gmx::max(double·a,·double·b)'],278 ········['../namespacegmx.xhtml#a16f6bf4a20b14262f28168596d5bb8b9',·1,·'gmx::max(double·a,·double·b)'],
281 ········['../namespacegmx.xhtml#aa8475501c67be44a07c58f4aa43eed23',·1,·'gmx::max(const·gmx::BasicVector&lt;·float·&gt;·&amp;v1,·const·gmx::BasicVector&lt;·float·&gt;·&amp;v2)'], 
282 ········['../group__module__simd.xhtml#ga68bbfb58d0ab7d2362d0efde15c14ca3',·1,·'gmx::max(Simd4Double·a,·Simd4Double·b)'], 
283 ········['../group__module__simd.xhtml#gaceb279f0a831efc0d8e6be7d96c9e6d2',·1,·'gmx::max(SimdDouble·a,·SimdDouble·b)'],279 ········['../group__module__simd.xhtml#gaceb279f0a831efc0d8e6be7d96c9e6d2',·1,·'gmx::max(SimdDouble·a,·SimdDouble·b)'],
 280 ········['../group__module__simd.xhtml#ga4edeef3c458f5c77cf3ceb80532a57ff',·1,·'gmx::max(SimdFloat·a,·SimdFloat·b)'],
284 ········['../namespacegmx.xhtml#a35c7b010fbd32f5424afa0de0c70db6f',·1,·'gmx::max(float·a,·float·b)']281 ········['../namespacegmx.xhtml#a35c7b010fbd32f5424afa0de0c70db6f',·1,·'gmx::max(float·a,·float·b)'],
 282 ········['../namespacegmx.xhtml#aa8475501c67be44a07c58f4aa43eed23',·1,·'gmx::max(const·gmx::BasicVector&lt;·float·&gt;·&amp;v1,·const·gmx::BasicVector&lt;·float·&gt;·&amp;v2)'],
 283 ········['../group__module__simd.xhtml#ga3c66081dde9666200461f364725a4085',·1,·'gmx::max(Simd4Float·a,·Simd4Float·b)'],
 284 ········['../group__module__simd.xhtml#ga68bbfb58d0ab7d2362d0efde15c14ca3',·1,·'gmx::max(Simd4Double·a,·Simd4Double·b)']
285 ····]],285 ····]],
286 ····['max_5f_172',·['max_',·['../structgmx_1_1MrcDataStatistics.xhtml#a3d4ebb4aee6f51e4383349225d3dee83',·1,·'gmx::MrcDataStatistics']]],286 ····['max_5f_172',·['max_',·['../structgmx_1_1MrcDataStatistics.xhtml#a3d4ebb4aee6f51e4383349225d3dee83',·1,·'gmx::MrcDataStatistics']]],
287 ····['max_5fbeta_173',·['max_beta',·['../structgmx__enfrotgrp.xhtml#ac3907c78cd20eccc0e427c288bec058d',·1,·'gmx_enfrotgrp']]],287 ····['max_5fbeta_173',·['max_beta',·['../structgmx__enfrotgrp.xhtml#ac3907c78cd20eccc0e427c288bec058d',·1,·'gmx_enfrotgrp']]],
288 ····['max_5fconnect_174',·['max_connect',·['../classgmx_1_1Lincs.xhtml#a7c26cd85abd23d06de22e27ee68af042',·1,·'gmx::Lincs']]],288 ····['max_5fconnect_174',·['max_connect',·['../classgmx_1_1Lincs.xhtml#a7c26cd85abd23d06de22e27ee68af042',·1,·'gmx::Lincs']]],
289 ····['max_5fcutoff2_175',·['max_cutoff2',·['../pbc_8cpp.xhtml#aa14c05a2e7b891ca9ce15895e75ff6db',·1,·'max_cutoff2():&#160;pbc.cpp'],289 ····['max_5fcutoff2_175',·['max_cutoff2',·['../pbc_8cpp.xhtml#aa14c05a2e7b891ca9ce15895e75ff6db',·1,·'max_cutoff2():&#160;pbc.cpp'],
290 ········['../structt__pbc.xhtml#a0648f104170187ab2a5656e7c16323d6',·1,·'t_pbc::max_cutoff2']290 ········['../structt__pbc.xhtml#a0648f104170187ab2a5656e7c16323d6',·1,·'t_pbc::max_cutoff2']
291 ····]],291 ····]],
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Offset 388, 44 lines modifiedOffset 388, 44 lines modified
388 ····['nhydrogens_258',·['nHydrogens',·['../structVirtualSiteConfiguration.xhtml#a1bb9b56fb2933b0895d9e5c836434fe4',·1,·'VirtualSiteConfiguration']]],388 ····['nhydrogens_258',·['nHydrogens',·['../structVirtualSiteConfiguration.xhtml#a1bb9b56fb2933b0895d9e5c836434fe4',·1,·'VirtualSiteConfiguration']]],
389 ····['niceheader_259',·['niceHeader',·['../namespacegmx.xhtml#a7ffeb99198d2e37e902971b17a673a47',·1,·'gmx']]],389 ····['niceheader_259',·['niceHeader',·['../namespacegmx.xhtml#a7ffeb99198d2e37e902971b17a673a47',·1,·'gmx']]],
390 ····['niceheader_2ecpp_260',·['niceheader.cpp',·['../niceheader_8cpp.xhtml',·1,·'']]],390 ····['niceheader_2ecpp_260',·['niceheader.cpp',·['../niceheader_8cpp.xhtml',·1,·'']]],
391 ····['niceheader_2eh_261',·['niceheader.h',·['../niceheader_8h.xhtml',·1,·'']]],391 ····['niceheader_2eh_261',·['niceheader.h',·['../niceheader_8h.xhtml',·1,·'']]],
392 ····['nicelevel_262',·['niceLevel',·['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#ae401a78d576830753b20012c99eee3af',·1,·'gmx::CommandLineCommonOptionsHolder']]],392 ····['nicelevel_262',·['niceLevel',·['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#ae401a78d576830753b20012c99eee3af',·1,·'gmx::CommandLineCommonOptionsHolder']]],
393 ····['niter_263',·['nIter',·['../classgmx_1_1Lincs.xhtml#a824b37b2ef7e60c47c602b99401253cb',·1,·'gmx::Lincs']]],393 ····['niter_263',·['nIter',·['../classgmx_1_1Lincs.xhtml#a824b37b2ef7e60c47c602b99401253cb',·1,·'gmx::Lincs']]],
394 ····['nk_264',·['nk',·['../structPmeShared.xhtml#ad46bca92a6c9fcfab1703a4a543c08ad',·1,·'PmeShared']]],394 ····['nk_264',·['nk',·['../structPmeShared.xhtml#ad46bca92a6c9fcfab1703a4a543c08ad',·1,·'PmeShared']]],
395 ····['nlambda_265',·['nlambda',·['../structdf__history__t.xhtml#a4eb78866873d889cb92ac4c8ae4a9fc5',·1,·'df_history_t::nlambda'],395 ····['nlambda_265',·['nlambda',·['../structgmx_1_1test_1_1anonymous__namespace_02freeenergyparameters_8cpp_03_1_1FreeEnergyParameterTestParameters.xhtml#aa38e81dff96e60ddd2840caf586a25f8',·1,·'gmx::test::anonymous_namespace{freeenergyparameters.cpp}::FreeEnergyParameterTestParameters::nLambda'],
396 ········['../structCheckpointHeaderContents.xhtml#ab66bef502f8f4264009a232ccb2784f2',·1,·'CheckpointHeaderContents::nlambda'],396 ········['../structCheckpointHeaderContents.xhtml#ab66bef502f8f4264009a232ccb2784f2',·1,·'CheckpointHeaderContents::nlambda'],
397 ········['../structgmx_1_1test_1_1anonymous__namespace_02freeenergyparameters_8cpp_03_1_1FreeEnergyParameterTestParameters.xhtml#aa38e81dff96e60ddd2840caf586a25f8',·1,·'gmx::test::anonymous_namespace{freeenergyparameters.cpp}::FreeEnergyParameterTestParameters::nLambda']397 ········['../structdf__history__t.xhtml#a4eb78866873d889cb92ac4c8ae4a9fc5',·1,·'df_history_t::nlambda']
398 ····]],398 ····]],
399 ····['nlhelp_266',·['nlhelp',·['../structgmx__ana__selmethod__help__t.xhtml#a6c9953d18124d498c25625b5bbe93ca2',·1,·'gmx_ana_selmethod_help_t']]],399 ····['nlhelp_266',·['nlhelp',·['../structgmx__ana__selmethod__help__t.xhtml#a6c9953d18124d498c25625b5bbe93ca2',·1,·'gmx_ana_selmethod_help_t']]],
400 ····['nlocat_267',·['nlocat',·['../classgmx_1_1Lincs.xhtml#a680bd23340caa32d1487edebe29d9d73',·1,·'gmx::Lincs']]],400 ····['nlocat_267',·['nlocat',·['../classgmx_1_1Lincs.xhtml#a680bd23340caa32d1487edebe29d9d73',·1,·'gmx::Lincs']]],
401 ····['nmax_268',·['nmax',·['../classgmx_1_1AnalysisDataDisplacementModule_1_1Impl.xhtml#a8e5b2f9059d6f17693094a6a4b5128d2',·1,·'gmx::AnalysisDataDisplacementModule::Impl']]],401 ····['nmax_268',·['nmax',·['../classgmx_1_1AnalysisDataDisplacementModule_1_1Impl.xhtml#a8e5b2f9059d6f17693094a6a4b5128d2',·1,·'gmx::AnalysisDataDisplacementModule::Impl']]],
 402 ····['nmol_269',·['nmol',·['../structswap__compartment.xhtml#a2e94233e596a0f850f243f40ed3065ad',·1,·'swap_compartment::nMol'],
402 ····['nmol_269',·['nmol',·['../classIListProxy.xhtml#af03684eb1f6214d450b0eafe27f6656e',·1,·'IListProxy::nmol()'],403 ········['../classIListProxy.xhtml#af03684eb1f6214d450b0eafe27f6656e',·1,·'IListProxy::nmol()'],
403 ········['../structgmx__molblock__t.xhtml#ad66167c805c7e81d2b03230107f6988e',·1,·'gmx_molblock_t::nmol'],404 ········['../structgmx__molblock__t.xhtml#ad66167c805c7e81d2b03230107f6988e',·1,·'gmx_molblock_t::nmol']
404 ········['../structswap__compartment.xhtml#a2e94233e596a0f850f243f40ed3065ad',·1,·'swap_compartment::nMol'] 
405 ····]],405 ····]],
406 ····['nmolav_270',·['nMolAv',·['../structswap__compartment.xhtml#a1c5cf1b43aad0e72e026192e463ef86d',·1,·'swap_compartment']]],406 ····['nmolav_270',·['nMolAv',·['../structswap__compartment.xhtml#a1c5cf1b43aad0e72e026192e463ef86d',·1,·'swap_compartment']]],
407 ····['nmolbefore_271',·['nMolBefore',·['../structswap__compartment.xhtml#a292f4fa2500a441010023c9153bbddbd',·1,·'swap_compartment']]],407 ····['nmolbefore_271',·['nMolBefore',·['../structswap__compartment.xhtml#a292f4fa2500a441010023c9153bbddbd',·1,·'swap_compartment']]],
408 ····['nmolpast_272',·['nMolPast',·['../structswap__compartment.xhtml#ae7d83b4eb0caa3600d29b02c66018c75',·1,·'swap_compartment']]],408 ····['nmolpast_272',·['nMolPast',·['../structswap__compartment.xhtml#ae7d83b4eb0caa3600d29b02c66018c75',·1,·'swap_compartment']]],
409 ····['nmolreq_273',·['nMolReq',·['../structswap__compartment.xhtml#a7a969f28baf7c47c1a1c585efb67d042',·1,·'swap_compartment']]],409 ····['nmolreq_273',·['nMolReq',·['../structswap__compartment.xhtml#a7a969f28baf7c47c1a1c585efb67d042',·1,·'swap_compartment']]],
410 ····['nmoves_274',·['nmoves',·['../structgmx__repl__ex.xhtml#ac8dd9c7860121f300cbe0e223a6be35c',·1,·'gmx_repl_ex']]],410 ····['nmoves_274',·['nmoves',·['../structgmx__repl__ex.xhtml#ac8dd9c7860121f300cbe0e223a6be35c',·1,·'gmx_repl_ex']]],
411 ····['nmtomrcunits_275',·['nmToMrcUnits',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a526bc78791409ce07ebfe4efc7623802',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],411 ····['nmtomrcunits_275',·['nmToMrcUnits',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a526bc78791409ce07ebfe4efc7623802',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],
412 ····['nn_276',·['nn',·['../structPmeShared.xhtml#af90553b49f49f598835c9681c8746a8d',·1,·'PmeShared']]],412 ····['nn_276',·['nn',·['../structPmeShared.xhtml#af90553b49f49f598835c9681c8746a8d',·1,·'PmeShared']]],
413 ····['nname_277',·['nname',·['../structMoleculePatch.xhtml#a242596f9e718d07894ab32198720544d',·1,·'MoleculePatch']]],413 ····['nname_277',·['nname',·['../structMoleculePatch.xhtml#a242596f9e718d07894ab32198720544d',·1,·'MoleculePatch']]],
414 ····['nnext_278',·['Nnext',·['../structt__bb.xhtml#ad223cd6a59d5e077cc565766f6f237f5',·1,·'t_bb']]],414 ····['nnext_278',·['Nnext',·['../structt__bb.xhtml#ad223cd6a59d5e077cc565766f6f237f5',·1,·'t_bb']]],
415 ····['nnhpres_279',·['nnhpres',·['../classt__state.xhtml#a554d8189a9b63e016efb91957509e623',·1,·'t_state::nnhpres'], 
416 ········['../structCheckpointHeaderContents.xhtml#adc4e78ec35c4403710adac94141a33fa',·1,·'CheckpointHeaderContents::nnhpres']415 ····['nnhpres_279',·['nnhpres',·['../structCheckpointHeaderContents.xhtml#adc4e78ec35c4403710adac94141a33fa',·1,·'CheckpointHeaderContents::nnhpres'],
 416 ········['../classt__state.xhtml#a554d8189a9b63e016efb91957509e623',·1,·'t_state::nnhpres']
417 ····]],417 ····]],
418 ····['nnodes_280',·['nnodes',·['../structCheckpointHeaderContents.xhtml#a6b8fa08267c339a937cb223d6b59f22f',·1,·'CheckpointHeaderContents::nnodes'],418 ····['nnodes_280',·['nnodes',·['../structCheckpointHeaderContents.xhtml#a6b8fa08267c339a937cb223d6b59f22f',·1,·'CheckpointHeaderContents::nnodes'],
419 ········['../structPmeShared.xhtml#a9a07e823867d654212cdf520e2538121',·1,·'PmeShared::nnodes']419 ········['../structPmeShared.xhtml#a9a07e823867d654212cdf520e2538121',·1,·'PmeShared::nnodes']
420 ····]],420 ····]],
421 ····['nnodesx_281',·['nnodesX',·['../structPmeShared.xhtml#a8452479239784ced7afff1e051830952',·1,·'PmeShared']]],421 ····['nnodesx_281',·['nnodesX',·['../structPmeShared.xhtml#a8452479239784ced7afff1e051830952',·1,·'PmeShared']]],
422 ····['nnodesy_282',·['nnodesY',·['../structPmeShared.xhtml#a37add1a0f09eb17756daf2c246a87cb8',·1,·'PmeShared']]],422 ····['nnodesy_282',·['nnodesY',·['../structPmeShared.xhtml#a37add1a0f09eb17756daf2c246a87cb8',·1,·'PmeShared']]],
423 ····['nnpot_2ecpp_283',·['nnpot.cpp',·['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],423 ····['nnpot_2ecpp_283',·['nnpot.cpp',·['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],
424 ········['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']424 ········['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']
425 ····]],425 ····]],
426 ····['nnpot_2eh_284',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],426 ····['nnpot_2eh_284',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],
427 ····['nnpotforceprovider_285',·['NNPotForceProvider',·['../classgmx_1_1NNPotForceProvider.xhtml',·1,·'gmx']]],427 ····['nnpotforceprovider_285',·['NNPotForceProvider',·['../classgmx_1_1NNPotForceProvider.xhtml',·1,·'gmx']]],
428 ····['nnpotforceprovider_2ecpp_286',·['nnpotforceprovider.cpp',·['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],428 ····['nnpotforceprovider_2ecpp_286',·['nnpotforceprovider.cpp',·['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
429 ········['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']429 ········['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
430 ····]],430 ····]],
431 ····['nnpotforceprovider_2eh_287',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],431 ····['nnpotforceprovider_2eh_287',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],
Offset 438, 34 lines modifiedOffset 438, 34 lines modified
438 ········['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']438 ········['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
439 ····]],439 ····]],
440 ····['nnpotoptions_2eh_294',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],440 ····['nnpotoptions_2eh_294',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],
441 ····['nnpotparameters_295',·['NNPotParameters',·['../structgmx_1_1NNPotParameters.xhtml',·1,·'gmx']]],441 ····['nnpotparameters_295',·['NNPotParameters',·['../structgmx_1_1NNPotParameters.xhtml',·1,·'gmx']]],
442 ····['nnpottopologypreprocessor_296',·['nnpottopologypreprocessor',·['../classgmx_1_1NNPotTopologyPreprocessor.xhtml#afb131c39ea21535f2f145444d8dbfc5e',·1,·'gmx::NNPotTopologyPreprocessor::NNPotTopologyPreprocessor()'],442 ····['nnpottopologypreprocessor_296',·['nnpottopologypreprocessor',·['../classgmx_1_1NNPotTopologyPreprocessor.xhtml#afb131c39ea21535f2f145444d8dbfc5e',·1,·'gmx::NNPotTopologyPreprocessor::NNPotTopologyPreprocessor()'],
443 ········['../classgmx_1_1NNPotTopologyPreprocessor.xhtml',·1,·'gmx::NNPotTopologyPreprocessor']443 ········['../classgmx_1_1NNPotTopologyPreprocessor.xhtml',·1,·'gmx::NNPotTopologyPreprocessor']
444 ····]],444 ····]],
445 ····['nnpottopologypreprocessor_2ecpp_297',·['nnpottopologypreprocessor.cpp',·['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],445 ····['nnpottopologypreprocessor_2ecpp_297',·['nnpottopologypreprocessor.cpp',·['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],
446 ········['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']446 ········['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']
447 ····]],447 ····]],
448 ····['nnpottopologypreprocessor_2eh_298',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],448 ····['nnpottopologypreprocessor_2eh_298',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],
449 ····['nnpottopologypreprocessortest_299',·['NNPotTopologyPreprocessorTest',·['../classgmx_1_1test_1_1NNPotTopologyPreprocessorTest.xhtml',·1,·'gmx::test']]],449 ····['nnpottopologypreprocessortest_299',·['NNPotTopologyPreprocessorTest',·['../classgmx_1_1test_1_1NNPotTopologyPreprocessorTest.xhtml',·1,·'gmx::test']]],
450 ····['nnstl_300',·['NNSTL',·['../pairlist__tuning_8cpp.xhtml#aa7bb25f96f0e989b4b7c45d407a1b63c',·1,·'pairlist_tuning.cpp']]],450 ····['nnstl_300',·['NNSTL',·['../pairlist__tuning_8cpp.xhtml#aa7bb25f96f0e989b4b7c45d407a1b63c',·1,·'pairlist_tuning.cpp']]],
451 ····['no_301',·['no',·['../md__enums_8h.xhtml#a07be3f2d86a9b6337ff8c4853a0fb8b8abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],451 ····['no_301',·['no',·['../md__enums_8h.xhtml#a07be3f2d86a9b6337ff8c4853a0fb8b8abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
452 ········['../md__enums_8h.xhtml#a7f23540ff5222f8735be151f3cbd1b2fabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'], 
453 ········['../md__enums_8h.xhtml#a4434e158af47f6a5cbc228465ade1511abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'], 
454 ········['../md__enums_8h.xhtml#ab1fce6aba35ca024e1ac818bdf1d5d15abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'], 
455 ········['../namespacegmx.xhtml#abb4f062823c006fc233c4b4bcb0119ecabafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
456 ········['../namespacegmx.xhtml#ab1684f724061fbe3bfdd1efde3e715e7abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
457 ········['../group__module__modularsimulator.xhtml#gga5c5a9708579f420d64688aaea88c2885abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
458 ········['../namespacegmx.xhtml#a65a4da1c9de2e9bed752f8b8a3f9f536abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'], 
459 ········['../namespacegmx.xhtml#af2ca01657023e02580baaaf0c011a60ca7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::no'], 
460 ········['../dlbtiming_8h.xhtml#a187697058dfa34f355e4ee2e8fcf1dc1a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'], 
461 ········['../dlbtiming_8h.xhtml#a4c394e83d3a1d89ac14e90553e54dff4a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'],452 ········['../dlbtiming_8h.xhtml#a4c394e83d3a1d89ac14e90553e54dff4a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'],
462 ········['../classgmx_1_1Bias.xhtml#aa82610508a501aa57b8b5be5054920f2abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::Bias::No'],453 ········['../dlbtiming_8h.xhtml#a187697058dfa34f355e4ee2e8fcf1dc1a7fa3b767c460b54a2be4d49030b349c7',·1,·'no:&#160;dlbtiming.h'],
 454 ········['../namespacegmx.xhtml#af2ca01657023e02580baaaf0c011a60ca7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::no'],
 455 ········['../namespacegmx.xhtml#a65a4da1c9de2e9bed752f8b8a3f9f536abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 456 ········['../group__module__modularsimulator.xhtml#gga5c5a9708579f420d64688aaea88c2885abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 457 ········['../namespacegmx.xhtml#ab1684f724061fbe3bfdd1efde3e715e7abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 458 ········['../namespacegmx.xhtml#abb4f062823c006fc233c4b4bcb0119ecabafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::No'],
 459 ········['../md__enums_8h.xhtml#ab1fce6aba35ca024e1ac818bdf1d5d15abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
 460 ········['../md__enums_8h.xhtml#a4434e158af47f6a5cbc228465ade1511abafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
 461 ········['../md__enums_8h.xhtml#a7f23540ff5222f8735be151f3cbd1b2fabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
463 ········['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],462 ········['../md__enums_8h.xhtml#a1df3eedfba9424ae3e518284a453d95cabafd7322c6e97d25b6299b5d6fe8920b',·1,·'No:&#160;md_enums.h'],
464 ········['../classgmx_1_1BiasParams.xhtml#a6e4efe51c269090a20241639f64bcb03a7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::BiasParams::no']463 ········['../classgmx_1_1BiasParams.xhtml#a6e4efe51c269090a20241639f64bcb03a7fa3b767c460b54a2be4d49030b349c7',·1,·'gmx::BiasParams::no'],
 464 ········['../classgmx_1_1Bias.xhtml#aa82610508a501aa57b8b5be5054920f2abafd7322c6e97d25b6299b5d6fe8920b',·1,·'gmx::Bias::No']
465 ····]],465 ····]],
466 ····['no_5fdelete_302',·['no_delete',·['../structgmx_1_1no__delete.xhtml',·1,·'gmx']]],466 ····['no_5fdelete_302',·['no_delete',·['../structgmx_1_1no__delete.xhtml',·1,·'gmx']]],
467 ····['no_5fvalue_303',·['NO_VALUE',·['../selvalue_8h.xhtml#a70b42b87d434580bf1493591857b8beca4d694119ce83b62d74ff06b5e017dca8',·1,·'selvalue.h']]],467 ····['no_5fvalue_303',·['NO_VALUE',·['../selvalue_8h.xhtml#a70b42b87d434580bf1493591857b8beca4d694119ce83b62d74ff06b5e017dca8',·1,·'selvalue.h']]],
468 ····['noappending_304',·['NoAppending',·['../namespacegmx.xhtml#afd6f3326407d61e4364f4bfeeebe5f03a95924eff082d0bc6529c77794edce7c8',·1,·'gmx']]],468 ····['noappending_304',·['NoAppending',·['../namespacegmx.xhtml#afd6f3326407d61e4364f4bfeeebe5f03a95924eff082d0bc6529c77794edce7c8',·1,·'gmx']]],
469 ····['nocallparameter_305',·['NoCallParameter',·['../classgmx_1_1BuildMDModulesNotifier_3_4_1_1NoCallParameter.xhtml',·1,·'gmx::BuildMDModulesNotifier&lt;&gt;']]],469 ····['nocallparameter_305',·['NoCallParameter',·['../classgmx_1_1BuildMDModulesNotifier_3_4_1_1NoCallParameter.xhtml',·1,·'gmx::BuildMDModulesNotifier&lt;&gt;']]],
470 ····['nocontentsmatch_306',·['NoContentsMatch',·['../classgmx_1_1test_1_1NoContentsMatch.xhtml',·1,·'gmx::test']]],470 ····['nocontentsmatch_306',·['NoContentsMatch',·['../classgmx_1_1test_1_1NoContentsMatch.xhtml',·1,·'gmx::test']]],
471 ····['nodeid_307',·['nodeid',·['../structPmeShared.xhtml#a3cb7f7f195edc383281687d9eb107973',·1,·'PmeShared']]],471 ····['nodeid_307',·['nodeid',·['../structPmeShared.xhtml#a3cb7f7f195edc383281687d9eb107973',·1,·'PmeShared']]],
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414 ········['../structgmx_1_1nbnxn__excl__t.xhtml#acedfd5c8e267cbe17c0f44a0c09b7f33',·1,·'gmx::nbnxn_excl_t::operator==()'],414 ········['../structgmx_1_1nbnxn__excl__t.xhtml#acedfd5c8e267cbe17c0f44a0c09b7f33',·1,·'gmx::nbnxn_excl_t::operator==()'],
415 ········['../classgmx_1_1ExponentialDistribution_1_1param__type.xhtml#aa8c58085db22f33906ea7610d629bc1e',·1,·'gmx::ExponentialDistribution::param_type::operator==()'],415 ········['../classgmx_1_1ExponentialDistribution_1_1param__type.xhtml#aa8c58085db22f33906ea7610d629bc1e',·1,·'gmx::ExponentialDistribution::param_type::operator==()'],
416 ········['../classgmx_1_1ExponentialDistribution.xhtml#a861d380456f3de070590091bcfa9c450',·1,·'gmx::ExponentialDistribution::operator==()'],416 ········['../classgmx_1_1ExponentialDistribution.xhtml#a861d380456f3de070590091bcfa9c450',·1,·'gmx::ExponentialDistribution::operator==()'],
417 ········['../classAtomIterator.xhtml#a131019b7785b19c5441332d1db5b53c1',·1,·'AtomIterator::operator==()'],417 ········['../classAtomIterator.xhtml#a131019b7785b19c5441332d1db5b53c1',·1,·'AtomIterator::operator==()'],
418 ········['../classgmx_1_1GammaDistribution.xhtml#a8c16fff1f566e551eed4c120796d1b4d',·1,·'gmx::GammaDistribution::operator==()'],418 ········['../classgmx_1_1GammaDistribution.xhtml#a8c16fff1f566e551eed4c120796d1b4d',·1,·'gmx::GammaDistribution::operator==()'],
419 ········['../classgmx_1_1NormalDistribution_1_1param__type.xhtml#adce250aa91a8e661eeb251cd870bc721',·1,·'gmx::NormalDistribution::param_type::operator==()'],419 ········['../classgmx_1_1NormalDistribution_1_1param__type.xhtml#adce250aa91a8e661eeb251cd870bc721',·1,·'gmx::NormalDistribution::param_type::operator==()'],
420 ········['../classgmx_1_1NormalDistribution.xhtml#aaa3b31154447ead4f82a4f703cbbb72e',·1,·'gmx::NormalDistribution::operator==()'], 
421 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ab4eceef543b7c7870a20aa540c4ee14f',·1,·'gmx::TabulatedNormalDistribution::operator==()'], 
422 ········['../classgmx_1_1ThreeFry2x64General.xhtml#abdd84b4ad2be63bab6281d334a52b8f4',·1,·'gmx::ThreeFry2x64General::operator==()'], 
423 ········['../classgmx_1_1UniformIntDistribution_1_1param__type.xhtml#a9326cd205dd093e9d6fc22aa590348d3',·1,·'gmx::UniformIntDistribution::param_type::operator==()'], 
424 ········['../classgmx_1_1UniformIntDistribution.xhtml#ad4fcfc7ee9414785a066f05c6592d20e',·1,·'gmx::UniformIntDistribution::operator==()'], 
425 ········['../classgmx_1_1UniformRealDistribution_1_1param__type.xhtml#a51e148261d27165d5999d24b1efa7d29',·1,·'gmx::UniformRealDistribution::param_type::operator==()'], 
426 ········['../classgmx_1_1UniformRealDistribution.xhtml#a8e84daaa940cc3848999e435e69a5c25',·1,·'gmx::UniformRealDistribution::operator==()'],420 ········['../classgmx_1_1UniformRealDistribution.xhtml#a8e84daaa940cc3848999e435e69a5c25',·1,·'gmx::UniformRealDistribution::operator==()'],
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427 ········['../classgmx_1_1SelectionParserSymbolIterator.xhtml#a59e459feab609adf418f245fe3306fe3',·1,·'gmx::SelectionParserSymbolIterator::operator==()']427 ········['../classgmx_1_1SelectionParserSymbolIterator.xhtml#a59e459feab609adf418f245fe3306fe3',·1,·'gmx::SelectionParserSymbolIterator::operator==()']
428 ····]],428 ····]],
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429 ····['operator_5b_5d_133',·['operator[]',·['../classgmx_1_1FixedCapacityVector.xhtml#ac695b3695422899aa106a748f2242166',·1,·'gmx::FixedCapacityVector::operator[]()'], 
430 ········['../classgmx_1_1ListOfLists.xhtml#acd74b039aaea684b78fc368d2b0bb289',·1,·'gmx::ListOfLists::operator[]()'], 
431 ········['../structgmx_1_1EnumerationArray.xhtml#a19f0ee284d558c5158a392189af41237',·1,·'gmx::EnumerationArray::operator[]()'],430 ········['../structgmx_1_1EnumerationArray.xhtml#a19f0ee284d558c5158a392189af41237',·1,·'gmx::EnumerationArray::operator[]()'],
432 ········['../classgmx_1_1ArrayRef.xhtml#ae5992e7e6c407d5f8fb0c08dd314b303',·1,·'gmx::ArrayRef::operator[]()'],431 ········['../classgmx_1_1ArrayRef.xhtml#ae5992e7e6c407d5f8fb0c08dd314b303',·1,·'gmx::ArrayRef::operator[]()'],
433 ········['../classStringTable.xhtml#ad323be1b121601515ed9af457ec5ddcc',·1,·'StringTable::operator[]()'],432 ········['../classStringTable.xhtml#ad323be1b121601515ed9af457ec5ddcc',·1,·'StringTable::operator[]()'],
434 ········['../classgmx_1_1BasicVector.xhtml#a1f32a1ba41548841b6696001d14ff278',·1,·'gmx::BasicVector::operator[](int·i)·const'],433 ········['../classgmx_1_1BasicVector.xhtml#a1f32a1ba41548841b6696001d14ff278',·1,·'gmx::BasicVector::operator[](int·i)·const'],
435 ········['../classgmx_1_1BasicVector.xhtml#a1c8a8588a9e93f68dba743c0cb9e18af',·1,·'gmx::BasicVector::operator[](int·i)'],434 ········['../classgmx_1_1BasicVector.xhtml#a1c8a8588a9e93f68dba743c0cb9e18af',·1,·'gmx::BasicVector::operator[](int·i)'],
436 ········['../classgmx_1_1KeyValueTreeObjectBuilder.xhtml#afcfc3b3506eb1e6d13bfb6e689c27ea0',·1,·'gmx::KeyValueTreeObjectBuilder::operator[]()'],435 ········['../classgmx_1_1KeyValueTreeObjectBuilder.xhtml#afcfc3b3506eb1e6d13bfb6e689c27ea0',·1,·'gmx::KeyValueTreeObjectBuilder::operator[]()'],
437 ········['../classgmx_1_1KeyValueTreePath.xhtml#a62cf97a0ac5b6cbc7af9888ed59e0f85',·1,·'gmx::KeyValueTreePath::operator[]()'],436 ········['../classgmx_1_1KeyValueTreePath.xhtml#a62cf97a0ac5b6cbc7af9888ed59e0f85',·1,·'gmx::KeyValueTreePath::operator[]()'],
438 ········['../classgmx_1_1FixedCapacityVector.xhtml#a25ced2077a500cd5614846ad603a52a9',·1,·'gmx::FixedCapacityVector::operator[]()'],437 ········['../classgmx_1_1FixedCapacityVector.xhtml#a25ced2077a500cd5614846ad603a52a9',·1,·'gmx::FixedCapacityVector::operator[](size_type·n)·noexcept'],
439 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02msd_8cpp_03_1_1MsdData.xhtml#ac8c1e5cf4bc31bc59fbe02e1e3e0020f',·1,·'gmx::analysismodules::anonymous_namespace{msd.cpp}::MsdData::operator[]()'],438 ········['../classgmx_1_1FixedCapacityVector.xhtml#ac695b3695422899aa106a748f2242166',·1,·'gmx::FixedCapacityVector::operator[](size_type·n)·const·noexcept'],
440 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#a9d827cc183213269fd50ded567b814c9',·1,·'gmx::internal::SimdArrayRef::operator[]()'],439 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#a9d827cc183213269fd50ded567b814c9',·1,·'gmx::internal::SimdArrayRef::operator[]()'],
441 ········['../classgmx_1_1basic__mdspan.xhtml#abfb92b8c8080a27aa05100195f8cad65',·1,·'gmx::basic_mdspan::operator[](const·IndexType·index)·const·noexcept'],440 ········['../classgmx_1_1basic__mdspan.xhtml#abfb92b8c8080a27aa05100195f8cad65',·1,·'gmx::basic_mdspan::operator[](const·IndexType·index)·const·noexcept'],
442 ········['../classgmx_1_1basic__mdspan.xhtml#adba2c0279184c7c51724dce1b5ba53f8',·1,·'gmx::basic_mdspan::operator[](const·IndexType·&amp;i)·const·noexcept'],441 ········['../classgmx_1_1basic__mdspan.xhtml#adba2c0279184c7c51724dce1b5ba53f8',·1,·'gmx::basic_mdspan::operator[](const·IndexType·&amp;i)·const·noexcept'],
443 ········['../classgmx_1_1PaddedVector.xhtml#aa4af8a957abb5d0c28a321c3b712a2c7',·1,·'gmx::PaddedVector::operator[](int·i)·const'],442 ········['../classgmx_1_1PaddedVector.xhtml#aa4af8a957abb5d0c28a321c3b712a2c7',·1,·'gmx::PaddedVector::operator[](int·i)·const'],
444 ········['../classgmx_1_1PaddedVector.xhtml#afdbd0a9199b2b06faf9039a172b7a76e',·1,·'gmx::PaddedVector::operator[](int·i)']443 ········['../classgmx_1_1PaddedVector.xhtml#afdbd0a9199b2b06faf9039a172b7a76e',·1,·'gmx::PaddedVector::operator[](int·i)'],
 444 ········['../classgmx_1_1ListOfLists.xhtml#acd74b039aaea684b78fc368d2b0bb289',·1,·'gmx::ListOfLists::operator[]()']
445 ····]],445 ····]],
446 ····['operator_5e_134',·['operator^',·['../group__module__simd.xhtml#ga8385ef4b8312eff3f715d2f817604e51',·1,·'gmx::operator^(Simd4Float·a,·Simd4Float·b)'],446 ····['operator_5e_134',·['operator^',·['../group__module__simd.xhtml#ga8385ef4b8312eff3f715d2f817604e51',·1,·'gmx::operator^(Simd4Float·a,·Simd4Float·b)'],
 447 ········['../group__module__simd.xhtml#ga37544015fbce9d2b11dce07e159e878b',·1,·'gmx::operator^(SimdFloat·a,·SimdFloat·b)'],
447 ········['../group__module__simd.xhtml#gad65f7d7aa6d2a6c4b697ac0be0f3a616',·1,·'gmx::operator^(SimdDouble·a,·SimdDouble·b)'],448 ········['../group__module__simd.xhtml#gad65f7d7aa6d2a6c4b697ac0be0f3a616',·1,·'gmx::operator^(SimdDouble·a,·SimdDouble·b)'],
448 ········['../group__module__simd.xhtml#gabb7e81f2ef83cfb9aaae088c8762c2b0',·1,·'gmx::operator^(SimdFInt32·a,·SimdFInt32·b)'], 
449 ········['../group__module__simd.xhtml#gaba7ccd2477ecf6b07f5b7696d9490038',·1,·'gmx::operator^(SimdDInt32·a,·SimdDInt32·b)'],449 ········['../group__module__simd.xhtml#gaba7ccd2477ecf6b07f5b7696d9490038',·1,·'gmx::operator^(SimdDInt32·a,·SimdDInt32·b)'],
450 ········['../group__module__simd.xhtml#ga37544015fbce9d2b11dce07e159e878b',·1,·'gmx::operator^(SimdFloat·a,·SimdFloat·b)'], 
451 ········['../group__module__simd.xhtml#gaad7bb7baf5edd91a8707584c9cdc086e',·1,·'gmx::operator^(Simd4Double·a,·Simd4Double·b)']450 ········['../group__module__simd.xhtml#gaad7bb7baf5edd91a8707584c9cdc086e',·1,·'gmx::operator^(Simd4Double·a,·Simd4Double·b)'],
 451 ········['../group__module__simd.xhtml#gabb7e81f2ef83cfb9aaae088c8762c2b0',·1,·'gmx::operator^(SimdFInt32·a,·SimdFInt32·b)']
452 ····]],452 ····]],
453 ····['operator_7c_135',·['operator|',·['../group__module__simd.xhtml#gabcaa9a287c021ad7e3507311ffe23497',·1,·'gmx::operator|(Simd4Double·a,·Simd4Double·b)'],453 ····['operator_7c_135',·['operator|',·['../group__module__simd.xhtml#ga69973d1808eb0e8e60715d3abf01cd22',·1,·'gmx::operator|(SimdFloat·a,·SimdFloat·b)'],
454 ········['../group__module__simd.xhtml#gad759e852213903c61d6d4b9053e794fc',·1,·'gmx::operator|(Simd4Float·a,·Simd4Float·b)'],454 ········['../group__module__simd.xhtml#gad759e852213903c61d6d4b9053e794fc',·1,·'gmx::operator|(Simd4Float·a,·Simd4Float·b)'],
455 ········['../group__module__simd.xhtml#ga72cbfbcd5395b355e242f2ef4284f5c5',·1,·'gmx::operator|(SimdDouble·a,·SimdDouble·b)'],455 ········['../group__module__simd.xhtml#ga72cbfbcd5395b355e242f2ef4284f5c5',·1,·'gmx::operator|(SimdDouble·a,·SimdDouble·b)'],
456 ········['../group__module__simd.xhtml#ga65d3eb9cd43b33b4665dfe676c0e79d2',·1,·'gmx::operator|(SimdDInt32·a,·SimdDInt32·b)'],456 ········['../group__module__simd.xhtml#ga65d3eb9cd43b33b4665dfe676c0e79d2',·1,·'gmx::operator|(SimdDInt32·a,·SimdDInt32·b)'],
 457 ········['../group__module__simd.xhtml#gabcaa9a287c021ad7e3507311ffe23497',·1,·'gmx::operator|(Simd4Double·a,·Simd4Double·b)'],
457 ········['../classgmx_1_1FlagsTemplate.xhtml#a3320b083043b67b957a2a0f0d7afc331',·1,·'gmx::FlagsTemplate::operator|()'], 
458 ········['../group__module__simd.xhtml#ga69973d1808eb0e8e60715d3abf01cd22',·1,·'gmx::operator|(SimdFloat·a,·SimdFloat·b)'], 
459 ········['../group__module__simd.xhtml#gaf6f2042babc63e1b20b08ed61d859f74',·1,·'gmx::operator|(SimdFInt32·a,·SimdFInt32·b)']458 ········['../group__module__simd.xhtml#gaf6f2042babc63e1b20b08ed61d859f74',·1,·'gmx::operator|(SimdFInt32·a,·SimdFInt32·b)'],
 459 ········['../classgmx_1_1FlagsTemplate.xhtml#a3320b083043b67b957a2a0f0d7afc331',·1,·'gmx::FlagsTemplate::operator|(const·FlagsTemplate&lt;·FlagType·&gt;·&amp;other)·const']
460 ····]],460 ····]],
461 ····['operator_7c_3d_136',·['operator|=',·['../classgmx_1_1FlagsTemplate.xhtml#ae042cf7992ac906cf26a15a08708b779',·1,·'gmx::FlagsTemplate']]],461 ····['operator_7c_3d_136',·['operator|=',·['../classgmx_1_1FlagsTemplate.xhtml#ae042cf7992ac906cf26a15a08708b779',·1,·'gmx::FlagsTemplate']]],
462 ····['operator_7c_7c_137',·['operator||',·['../group__module__simd.xhtml#ga5d5483d15fe15e3c3eaf1e4e90e53f90',·1,·'gmx::operator||(Simd4DBool·a,·Simd4DBool·b)'],462 ····['operator_7c_7c_137',·['operator||',·['../group__module__simd.xhtml#ga5d5483d15fe15e3c3eaf1e4e90e53f90',·1,·'gmx::operator||(Simd4DBool·a,·Simd4DBool·b)'],
463 ········['../group__module__simd.xhtml#gaf2ab4b4f3d3e7f6e9a012df64c1d9f3c',·1,·'gmx::operator||(Simd4FBool·a,·Simd4FBool·b)'],463 ········['../group__module__simd.xhtml#gaf2ab4b4f3d3e7f6e9a012df64c1d9f3c',·1,·'gmx::operator||(Simd4FBool·a,·Simd4FBool·b)'],
464 ········['../group__module__simd.xhtml#gad1da27c5bc4fd40afe78810c7b6e0730',·1,·'gmx::operator||(SimdDBool·a,·SimdDBool·b)'],464 ········['../group__module__simd.xhtml#gad1da27c5bc4fd40afe78810c7b6e0730',·1,·'gmx::operator||(SimdDBool·a,·SimdDBool·b)'],
465 ········['../group__module__simd.xhtml#ga2382ca9a262a0503bb5dcfcec09df671',·1,·'gmx::operator||(SimdDIBool·a,·SimdDIBool·b)'],465 ········['../group__module__simd.xhtml#ga2382ca9a262a0503bb5dcfcec09df671',·1,·'gmx::operator||(SimdDIBool·a,·SimdDIBool·b)'],
466 ········['../group__module__simd.xhtml#ga5595db8a2c813f0ae078285a1b6b8bd3',·1,·'gmx::operator||(SimdFBool·a,·SimdFBool·b)'],466 ········['../group__module__simd.xhtml#ga5595db8a2c813f0ae078285a1b6b8bd3',·1,·'gmx::operator||(SimdFBool·a,·SimdFBool·b)'],
Offset 510, 81 lines modifiedOffset 510, 81 lines modified
510 ········['../tests_2optimization_8cpp.xhtml',·1,·'(Global·Namespace)']510 ········['../tests_2optimization_8cpp.xhtml',·1,·'(Global·Namespace)']
511 ····]],511 ····]],
512 ····['optimization_2eh_155',·['optimization.h',·['../optimization_8h.xhtml',·1,·'']]],512 ····['optimization_2eh_155',·['optimization.h',·['../optimization_8h.xhtml',·1,·'']]],
513 ····['optimize_5farithmetic_5fexpressions_156',·['optimize_arithmetic_expressions',·['../compiler_8cpp.xhtml#aa22e901f96e3edaa72c2e222ed75bd01',·1,·'compiler.cpp']]],513 ····['optimize_5farithmetic_5fexpressions_156',·['optimize_arithmetic_expressions',·['../compiler_8cpp.xhtml#aa22e901f96e3edaa72c2e222ed75bd01',·1,·'compiler.cpp']]],
514 ····['optimize_5fboolean_5fexpressions_157',·['optimize_boolean_expressions',·['../compiler_8cpp.xhtml#aaf983339164e05e4e7319e88683ca6d6',·1,·'compiler.cpp']]],514 ····['optimize_5fboolean_5fexpressions_157',·['optimize_boolean_expressions',·['../compiler_8cpp.xhtml#aaf983339164e05e4e7319e88683ca6d6',·1,·'compiler.cpp']]],
515 ····['optimize_5fsurface_5fpoints_158',·['optimize_surface_points',·['../sm__insolidangle_8cpp.xhtml#aadef1b206fd479d83a526a388faa275e',·1,·'sm_insolidangle.cpp']]],515 ····['optimize_5fsurface_5fpoints_158',·['optimize_surface_points',·['../sm__insolidangle_8cpp.xhtml#aadef1b206fd479d83a526a388faa275e',·1,·'sm_insolidangle.cpp']]],
516 ····['optimizeddcells_159',·['optimizeDDCells',·['../domdec__setup_8cpp.xhtml#a0116fb195a0ff21854f683c3d8676b5a',·1,·'domdec_setup.cpp']]],516 ····['optimizeddcells_159',·['optimizeDDCells',·['../domdec__setup_8cpp.xhtml#a0116fb195a0ff21854f683c3d8676b5a',·1,·'domdec_setup.cpp']]],
517 ····['option_160',·['option',·['../classgmx_1_1OptionInfo.xhtml#adc99ae3c6896ed469ae9a4aff7423cd9',·1,·'gmx::OptionInfo::option()'],517 ····['option_160',·['option',·['../classgmx_1_1OptionInfo.xhtml#adc99ae3c6896ed469ae9a4aff7423cd9',·1,·'gmx::OptionInfo::option()·const'],
518 ········['../structt__pargs.xhtml#a11d53770ae18dbb0a0320c925b4ebc35',·1,·'t_pargs::option'], 
519 ········['../classgmx_1_1OptionInfo.xhtml#a1ec4a05fce3bfa125c320dd8e0cfc604',·1,·'gmx::OptionInfo::option()']518 ········['../classgmx_1_1OptionInfo.xhtml#a1ec4a05fce3bfa125c320dd8e0cfc604',·1,·'gmx::OptionInfo::option()'],
 519 ········['../structt__pargs.xhtml#a11d53770ae18dbb0a0320c925b4ebc35',·1,·'t_pargs::option']
520 ····]],520 ····]],
521 ····['option_20module_20parameters_161',·['Storing·non-mdp·option·module·parameters',·['../page_mdmodules.xhtml#autotoc_md7',·1,·'']]],521 ····['option_20module_20parameters_161',·['Storing·non-mdp·option·module·parameters',·['../page_mdmodules.xhtml#autotoc_md7',·1,·'']]],
522 ····['option_2ecpp_162',·['option.cpp',·['../option_8cpp.xhtml',·1,·'']]],522 ····['option_2ecpp_162',·['option.cpp',·['../option_8cpp.xhtml',·1,·'']]],
523 ····['optionfiletype_163',·['OptionFileType',·['../group__module__options.xhtml#ga322a6d38e527f46b273c08583a31665d',·1,·'gmx']]],523 ····['optionfiletype_163',·['OptionFileType',·['../group__module__options.xhtml#ga322a6d38e527f46b273c08583a31665d',·1,·'gmx']]],
524 ····['optionfiletype_2eh_164',·['optionfiletype.h',·['../optionfiletype_8h.xhtml',·1,·'']]],524 ····['optionfiletype_2eh_164',·['optionfiletype.h',·['../optionfiletype_8h.xhtml',·1,·'']]],
525 ····['optionflag_165',·['OptionFlag',·['../namespacegmx.xhtml#ad86fc7354045be1e1456c019b8f97c25',·1,·'gmx']]],525 ····['optionflag_165',·['OptionFlag',·['../namespacegmx.xhtml#ad86fc7354045be1e1456c019b8f97c25',·1,·'gmx']]],
526 ····['optionflags_166',·['OptionFlags',·['../namespacegmx.xhtml#a0b60cc84dcdf372e00a5084712630993',·1,·'gmx']]],526 ····['optionflags_166',·['OptionFlags',·['../namespacegmx.xhtml#a0b60cc84dcdf372e00a5084712630993',·1,·'gmx']]],
527 ····['optionflags_2eh_167',·['optionflags.h',·['../optionflags_8h.xhtml',·1,·'']]],527 ····['optionflags_2eh_167',·['optionflags.h',·['../optionflags_8h.xhtml',·1,·'']]],
 528 ····['optioninfo_168',·['optioninfo',·['../classgmx_1_1OptionInfo.xhtml',·1,·'gmx::OptionInfo'],
528 ····['optioninfo_168',·['optioninfo',·['../classgmx_1_1test_1_1anonymous__namespace_02abstractoptionstorage_8cpp_03_1_1MockOptionStorage.xhtml#a7d87e123198297afec33a2f9e047afea',·1,·'gmx::test::anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage::optionInfo()'], 
529 ········['../classgmx_1_1StringOptionStorage.xhtml#adfec3df516810853d338d2a19f3082cb',·1,·'gmx::StringOptionStorage::optionInfo()'], 
530 ········['../classgmx_1_1EnumOptionStorage.xhtml#adbdf1a9b814e0e4ce1d33726c51c3527',·1,·'gmx::EnumOptionStorage::optionInfo()'], 
531 ········['../classgmx_1_1FileNameOptionStorage.xhtml#ac565fab34f14163b1e8591c73b13179b',·1,·'gmx::FileNameOptionStorage::optionInfo()'], 
532 ········['../classgmx_1_1OptionInfo.xhtml#a28702d9e5916402f81fe48c541a260bc',·1,·'gmx::OptionInfo::OptionInfo()'],529 ········['../classgmx_1_1OptionInfo.xhtml#a28702d9e5916402f81fe48c541a260bc',·1,·'gmx::OptionInfo::OptionInfo()'],
533 ········['../classgmx_1_1SelectionOptionStorage.xhtml#a92005e65992f933cee89ac8e73364c26',·1,·'gmx::SelectionOptionStorage::optionInfo()'],530 ········['../classgmx_1_1SelectionOptionStorage.xhtml#a92005e65992f933cee89ac8e73364c26',·1,·'gmx::SelectionOptionStorage::optionInfo()'],
534 ········['../classgmx_1_1SelectionFileOptionStorage.xhtml#ae7e23ab9895809f8529112419a0d6868',·1,·'gmx::SelectionFileOptionStorage::optionInfo()'],531 ········['../classgmx_1_1SelectionFileOptionStorage.xhtml#ae7e23ab9895809f8529112419a0d6868',·1,·'gmx::SelectionFileOptionStorage::optionInfo()'],
 532 ········['../classgmx_1_1test_1_1anonymous__namespace_02abstractoptionstorage_8cpp_03_1_1MockOptionStorage.xhtml#a7d87e123198297afec33a2f9e047afea',·1,·'gmx::test::anonymous_namespace{abstractoptionstorage.cpp}::MockOptionStorage::optionInfo()'],
 533 ········['../classgmx_1_1FileNameOptionStorage.xhtml#ac565fab34f14163b1e8591c73b13179b',·1,·'gmx::FileNameOptionStorage::optionInfo()'],
 534 ········['../classgmx_1_1EnumOptionStorage.xhtml#adbdf1a9b814e0e4ce1d33726c51c3527',·1,·'gmx::EnumOptionStorage::optionInfo()'],
 535 ········['../classgmx_1_1StringOptionStorage.xhtml#adfec3df516810853d338d2a19f3082cb',·1,·'gmx::StringOptionStorage::optionInfo()'],
 536 ········['../classgmx_1_1FloatOptionStorage.xhtml#a22c2a72cd49b6566794868f635f363fb',·1,·'gmx::FloatOptionStorage::optionInfo()'],
535 ········['../classgmx_1_1DoubleOptionStorage.xhtml#a6a468029afea3a69795399893e9c9e61',·1,·'gmx::DoubleOptionStorage::optionInfo()'],537 ········['../classgmx_1_1DoubleOptionStorage.xhtml#a6a468029afea3a69795399893e9c9e61',·1,·'gmx::DoubleOptionStorage::optionInfo()'],
536 ········['../classgmx_1_1OptionInfo.xhtml',·1,·'gmx::OptionInfo'], 
537 ········['../classgmx_1_1AbstractOptionStorage.xhtml#a14a9360077f79b7c0f768260fa807796',·1,·'gmx::AbstractOptionStorage::optionInfo()'], 
538 ········['../classgmx_1_1BooleanOptionStorage.xhtml#a6dcd9cecae230e1d8f9551d329fb6fbc',·1,·'gmx::BooleanOptionStorage::optionInfo()'], 
539 ········['../classgmx_1_1IntegerOptionStorage.xhtml#a51929f25babbe05a1b8829acd081702a',·1,·'gmx::IntegerOptionStorage::optionInfo()'], 
540 ········['../classgmx_1_1Int64OptionStorage.xhtml#a3b575c5b59217bd0f94ff8a44aa1c9b5',·1,·'gmx::Int64OptionStorage::optionInfo()'],538 ········['../classgmx_1_1Int64OptionStorage.xhtml#a3b575c5b59217bd0f94ff8a44aa1c9b5',·1,·'gmx::Int64OptionStorage::optionInfo()'],
 539 ········['../classgmx_1_1IntegerOptionStorage.xhtml#a51929f25babbe05a1b8829acd081702a',·1,·'gmx::IntegerOptionStorage::optionInfo()'],
 540 ········['../classgmx_1_1BooleanOptionStorage.xhtml#a6dcd9cecae230e1d8f9551d329fb6fbc',·1,·'gmx::BooleanOptionStorage::optionInfo()'],
541 ········['../classgmx_1_1FloatOptionStorage.xhtml#a22c2a72cd49b6566794868f635f363fb',·1,·'gmx::FloatOptionStorage::optionInfo()']541 ········['../classgmx_1_1AbstractOptionStorage.xhtml#a14a9360077f79b7c0f768260fa807796',·1,·'gmx::AbstractOptionStorage::optionInfo()']
542 ····]],542 ····]],
543 ····['optionlist_169',·['optionlist',·['../classgmx_1_1SelectionOptionManager_1_1Impl.xhtml#a9bcab8534a29f710047bfcccba220da1',·1,·'gmx::SelectionOptionManager::Impl::OptionList'], 
544 ········['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#abd2f04d3b754c9be06639ee28a16e0e7',·1,·'gmx::internal::OptionSectionImpl::Group::OptionList']543 ····['optionlist_169',·['optionlist',·['../classgmx_1_1internal_1_1OptionSectionImpl_1_1Group.xhtml#abd2f04d3b754c9be06639ee28a16e0e7',·1,·'gmx::internal::OptionSectionImpl::Group::OptionList'],
 544 ········['../classgmx_1_1SelectionOptionManager_1_1Impl.xhtml#a9bcab8534a29f710047bfcccba220da1',·1,·'gmx::SelectionOptionManager::Impl::OptionList']
545 ····]],545 ····]],
546 ····['optionmanagercontainer_170',·['OptionManagerContainer',·['../classgmx_1_1OptionManagerContainer.xhtml',·1,·'gmx']]],546 ····['optionmanagercontainer_170',·['OptionManagerContainer',·['../classgmx_1_1OptionManagerContainer.xhtml',·1,·'gmx']]],
547 ····['optionmanagercontainer_2eh_171',·['optionmanagercontainer.h',·['../optionmanagercontainer_8h.xhtml',·1,·'']]],547 ····['optionmanagercontainer_2eh_171',·['optionmanagercontainer.h',·['../optionmanagercontainer_8h.xhtml',·1,·'']]],
548 ····['optionmap_172',·['OptionMap',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aa8de9d9b14647ede508a45dfb7ebbd22',·1,·'gmx::internal::OptionSectionImpl']]],548 ····['optionmap_172',·['OptionMap',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aa8de9d9b14647ede508a45dfb7ebbd22',·1,·'gmx::internal::OptionSectionImpl']]],
549 ····['optionmap_5f_173',·['optionMap_',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aec29c46247eccc69f7ffa3f5c9cebed4',·1,·'gmx::internal::OptionSectionImpl']]],549 ····['optionmap_5f_173',·['optionMap_',·['../classgmx_1_1internal_1_1OptionSectionImpl.xhtml#aec29c46247eccc69f7ffa3f5c9cebed4',·1,·'gmx::internal::OptionSectionImpl']]],
550 ····['options_174',·['options',·['../page_trajectoryanalysisframework.xhtml#section_trajectoryanalysisframework_options',·1,·'Input·options'],550 ····['options_174',·['options',·['../page_trajectoryanalysisframework.xhtml#section_trajectoryanalysisframework_options',·1,·'Input·options'],
551 ········['../page_energyanalysisframework.xhtml#section_energyanalysisframework_options',·1,·'Input·options'],551 ········['../page_energyanalysisframework.xhtml#section_energyanalysisframework_options',·1,·'Input·options'],
552 ········['../page_analysistemplate.xhtml#autotoc_md83',·1,·'Input·options'],552 ········['../page_analysistemplate.xhtml#autotoc_md83',·1,·'Input·options'],
 553 ········['../classgmx__reverse__top__t.xhtml#a1784e4b777f6805ec9e792f04fa2b78a',·1,·'gmx_reverse_top_t::options()'],
553 ········['../classgmx_1_1Options.xhtml#a488515445eb8fd101a43b1903e64bdbf',·1,·'gmx::Options::Options()'], 
554 ········['../classgmx_1_1Options.xhtml',·1,·'gmx::Options'], 
555 ········['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#af6fe6e0a4bd11c13b7f64e60dfe59c2b',·1,·'gmx::CommandLineCommonOptionsHolder::options()'],554 ········['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#af6fe6e0a4bd11c13b7f64e60dfe59c2b',·1,·'gmx::CommandLineCommonOptionsHolder::options()'],
556 ········['../classgmx__reverse__top__t.xhtml#a1784e4b777f6805ec9e792f04fa2b78a',·1,·'gmx_reverse_top_t::options()']555 ········['../classgmx_1_1Options.xhtml#a488515445eb8fd101a43b1903e64bdbf',·1,·'gmx::Options::Options()'],
 556 ········['../classgmx_1_1Options.xhtml',·1,·'gmx::Options']
557 ····]],557 ····]],
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Offset 46, 16 lines modifiedOffset 46, 16 lines modified
46 ····['paddedvectortest_26',·['PaddedVectorTest',·['../classgmx_1_1test_1_1PaddedVectorTest.xhtml',·1,·'gmx::test']]],46 ····['paddedvectortest_26',·['PaddedVectorTest',·['../classgmx_1_1test_1_1PaddedVectorTest.xhtml',·1,·'gmx::test']]],
47 ····['padding_27',·['padding',·['../structgmx_1_1BoundingBox_1_1Corner.xhtml#a74a1c9cb3020fc75e8a7afe9c7047d7b',·1,·'gmx::BoundingBox::Corner']]],47 ····['padding_27',·['padding',·['../structgmx_1_1BoundingBox_1_1Corner.xhtml#a74a1c9cb3020fc75e8a7afe9c7047d7b',·1,·'gmx::BoundingBox::Corner']]],
48 ····['paddingtraits_28',·['PaddingTraits',·['../structgmx_1_1detail_1_1PaddingTraits.xhtml',·1,·'gmx::detail']]],48 ····['paddingtraits_28',·['PaddingTraits',·['../structgmx_1_1detail_1_1PaddingTraits.xhtml',·1,·'gmx::detail']]],
49 ····['pagealignedallocationpolicy_29',·['PageAlignedAllocationPolicy',·['../classgmx_1_1PageAlignedAllocationPolicy.xhtml',·1,·'gmx']]],49 ····['pagealignedallocationpolicy_29',·['PageAlignedAllocationPolicy',·['../classgmx_1_1PageAlignedAllocationPolicy.xhtml',·1,·'gmx']]],
50 ····['pagealignedallocator_30',·['PageAlignedAllocator',·['../namespacegmx.xhtml#af01c69345463ebb433d1fedfd356b74a',·1,·'gmx']]],50 ····['pagealignedallocator_30',·['PageAlignedAllocator',·['../namespacegmx.xhtml#af01c69345463ebb433d1fedfd356b74a',·1,·'gmx']]],
51 ····['pagesize_31',·['pageSize',·['../namespacegmx.xhtml#a41f63c30185ee31c10a30e46b7d53f9d',·1,·'gmx']]],51 ····['pagesize_31',·['pageSize',·['../namespacegmx.xhtml#a41f63c30185ee31c10a30e46b7d53f9d',·1,·'gmx']]],
52 ····['pair_32',·['pair',·['../namespacegmx.xhtml#ad4174b02d2bfb10e8538d4844ecc6f81ad0bd662806a73209a1c6fbe55591fbff',·1,·'gmx::Pair'],52 ····['pair_32',·['pair',·['../namespacegmx.xhtml#ad4174b02d2bfb10e8538d4844ecc6f81ad0bd662806a73209a1c6fbe55591fbff',·1,·'gmx::Pair'],
53 ········['../structgmx_1_1nbnxn__excl__t.xhtml#a6a392653c71a1a8e133e2855d5cab556',·1,·'gmx::nbnxn_excl_t::pair'], 
54 ········['../structgmx_1_1anonymous__namespace_02domainpaircomm_8cpp_03_1_1DistancesSquared.xhtml#af1e781c15cbc8b00f520c621ef583b1a',·1,·'gmx::anonymous_namespace{domainpaircomm.cpp}::DistancesSquared::pair']53 ········['../structgmx_1_1anonymous__namespace_02domainpaircomm_8cpp_03_1_1DistancesSquared.xhtml#af1e781c15cbc8b00f520c621ef583b1a',·1,·'gmx::anonymous_namespace{domainpaircomm.cpp}::DistancesSquared::pair'],
 54 ········['../structgmx_1_1nbnxn__excl__t.xhtml#a6a392653c71a1a8e133e2855d5cab556',·1,·'gmx::nbnxn_excl_t::pair']
55 ····]],55 ····]],
56 ····['pair_20interactions_33',·['Non-bonded·pair·interactions',·['../group__module__nbnxm.xhtml',·1,·'']]],56 ····['pair_20interactions_33',·['Non-bonded·pair·interactions',·['../group__module__nbnxm.xhtml',·1,·'']]],
57 ····['paircountwithincutoff_34',·['pairCountWithinCutoff',·['../namespacegmx.xhtml#a246c6fa4555b021df975ad1b7f7697c2',·1,·'gmx']]],57 ····['paircountwithincutoff_34',·['pairCountWithinCutoff',·['../namespacegmx.xhtml#a246c6fa4555b021df975ad1b7f7697c2',·1,·'gmx']]],
58 ····['pairdist_2ecpp_35',·['pairdist.cpp',·['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'],58 ····['pairdist_2ecpp_35',·['pairdist.cpp',·['../tests_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)'],
59 ········['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)']59 ········['../modules_2pairdist_8cpp.xhtml',·1,·'(Global·Namespace)']
60 ····]],60 ····]],
61 ····['pairdist_2eh_36',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]],61 ····['pairdist_2eh_36',·['pairdist.h',·['../pairdist_8h.xhtml',·1,·'']]],
Offset 68, 16 lines modifiedOffset 68, 16 lines modified
68 ····['pairhash_41',·['pairHash',·['../structgmx_1_1pairHash.xhtml',·1,·'gmx']]],68 ····['pairhash_41',·['pairHash',·['../structgmx_1_1pairHash.xhtml',·1,·'gmx']]],
69 ····['pairlist_2ecpp_42',·['pairlist.cpp',·['../tests_2pairlist_8cpp.xhtml',·1,·'']]],69 ····['pairlist_2ecpp_42',·['pairlist.cpp',·['../tests_2pairlist_8cpp.xhtml',·1,·'']]],
70 ····['pairlist_5fimask_2eh_43',·['pairlist_imask.h',·['../pairlist__imask_8h.xhtml',·1,·'']]],70 ····['pairlist_5fimask_2eh_43',·['pairlist_imask.h',·['../pairlist__imask_8h.xhtml',·1,·'']]],
71 ····['pairlist_5fsimd_5fkernel_2ecpp_44',·['pairlist_simd_kernel.cpp',·['../pairlist__simd__kernel_8cpp.xhtml',·1,·'']]],71 ····['pairlist_5fsimd_5fkernel_2ecpp_44',·['pairlist_simd_kernel.cpp',·['../pairlist__simd__kernel_8cpp.xhtml',·1,·'']]],
72 ····['pairlist_5fsimd_5fkernel_2eh_45',·['pairlist_simd_kernel.h',·['../pairlist__simd__kernel_8h.xhtml',·1,·'']]],72 ····['pairlist_5fsimd_5fkernel_2eh_45',·['pairlist_simd_kernel.h',·['../pairlist__simd__kernel_8h.xhtml',·1,·'']]],
73 ····['pairlist_5ftuning_2ecpp_46',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]],73 ····['pairlist_5ftuning_2ecpp_46',·['pairlist_tuning.cpp',·['../pairlist__tuning_8cpp.xhtml',·1,·'']]],
74 ····['pairlist_5ftuning_2eh_47',·['pairlist_tuning.h',·['../pairlist__tuning_8h.xhtml',·1,·'']]],74 ····['pairlist_5ftuning_2eh_47',·['pairlist_tuning.h',·['../pairlist__tuning_8h.xhtml',·1,·'']]],
75 ····['pairlistcutoff_48',·['pairlistcutoff',·['../structgmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03_1_1KernelOptions.xhtml#a99a1005d4246403b05b8dee487944485',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::KernelOptions::pairlistCutoff'], 
76 ········['../structgmx_1_1NbnxmKernelBenchOptions.xhtml#a2023ee62d6b1a45f5cc8bce187330699',·1,·'gmx::NbnxmKernelBenchOptions::pairlistCutoff']75 ····['pairlistcutoff_48',·['pairlistcutoff',·['../structgmx_1_1NbnxmKernelBenchOptions.xhtml#a2023ee62d6b1a45f5cc8bce187330699',·1,·'gmx::NbnxmKernelBenchOptions::pairlistCutoff'],
 76 ········['../structgmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03_1_1KernelOptions.xhtml#a99a1005d4246403b05b8dee487944485',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::KernelOptions::pairlistCutoff']
77 ····]],77 ····]],
78 ····['pairlistinnerradius_49',·['pairlistInnerRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a51c4a118964f4b5213facfd765f76243',·1,·'gmx::nonbonded_verlet_t']]],78 ····['pairlistinnerradius_49',·['pairlistInnerRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a51c4a118964f4b5213facfd765f76243',·1,·'gmx::nonbonded_verlet_t']]],
79 ····['pairlistissimple_50',·['pairlistIsSimple',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a26c1965627a134ffaf8dc77448ae7f43',·1,·'gmx::nonbonded_verlet_t']]],79 ····['pairlistissimple_50',·['pairlistIsSimple',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a26c1965627a134ffaf8dc77448ae7f43',·1,·'gmx::nonbonded_verlet_t']]],
80 ····['pairlistouterradius_51',·['pairlistOuterRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a6d5f189da301555a408b19e4b782eb15',·1,·'gmx::nonbonded_verlet_t']]],80 ····['pairlistouterradius_51',·['pairlistOuterRadius',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a6d5f189da301555a408b19e4b782eb15',·1,·'gmx::nonbonded_verlet_t']]],
81 ····['pairlistparams_52',·['pairlistparams',·['../structgmx_1_1PairlistParams.xhtml',·1,·'gmx::PairlistParams'],81 ····['pairlistparams_52',·['pairlistparams',·['../structgmx_1_1PairlistParams.xhtml',·1,·'gmx::PairlistParams'],
82 ········['../structgmx_1_1PairlistParams.xhtml#a5e50f9cb2a367fff511bb6fceb102545',·1,·'gmx::PairlistParams::PairlistParams()']82 ········['../structgmx_1_1PairlistParams.xhtml#a5e50f9cb2a367fff511bb6fceb102545',·1,·'gmx::PairlistParams::PairlistParams()']
83 ····]],83 ····]],
Offset 85, 57 lines modifiedOffset 85, 57 lines modified
85 ····['pairlistparams_2eh_54',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],85 ····['pairlistparams_2eh_54',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],
86 ····['pairlistset_55',·['pairlistset',·['../classgmx_1_1PairlistSets.xhtml#a0f73ad8dba4b6b59d20f9488611e1efc',·1,·'gmx::PairlistSets::pairlistSet()'],86 ····['pairlistset_55',·['pairlistset',·['../classgmx_1_1PairlistSets.xhtml#a0f73ad8dba4b6b59d20f9488611e1efc',·1,·'gmx::PairlistSets::pairlistSet()'],
87 ········['../classgmx_1_1PairlistSet.xhtml#ae43d2e1d2818c66c47426aa57f40c09b',·1,·'gmx::PairlistSet::PairlistSet()'],87 ········['../classgmx_1_1PairlistSet.xhtml#ae43d2e1d2818c66c47426aa57f40c09b',·1,·'gmx::PairlistSet::PairlistSet()'],
88 ········['../classgmx_1_1PairlistSet.xhtml',·1,·'gmx::PairlistSet']88 ········['../classgmx_1_1PairlistSet.xhtml',·1,·'gmx::PairlistSet']
89 ····]],89 ····]],
90 ····['pairlistset_2ecpp_56',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],90 ····['pairlistset_2ecpp_56',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],
91 ····['pairlistset_2eh_57',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],91 ····['pairlistset_2eh_57',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],
 92 ····['pairlistsets_58',·['pairlistsets',·['../classgmx_1_1PairlistSets.xhtml',·1,·'gmx::PairlistSets'],
92 ····['pairlistsets_58',·['pairlistsets',·['../structgmx_1_1nonbonded__verlet__t.xhtml#aeb0b1a81cdebaac68841abd89635e084',·1,·'gmx::nonbonded_verlet_t::pairlistSets()'],93 ········['../structgmx_1_1nonbonded__verlet__t.xhtml#aeb0b1a81cdebaac68841abd89635e084',·1,·'gmx::nonbonded_verlet_t::pairlistSets()'],
93 ········['../classgmx_1_1PairlistSets.xhtml',·1,·'gmx::PairlistSets'], 
94 ········['../classgmx_1_1PairlistSets.xhtml#a9375364a83138eae955b23cd199fd891',·1,·'gmx::PairlistSets::PairlistSets()']94 ········['../classgmx_1_1PairlistSets.xhtml#a9375364a83138eae955b23cd199fd891',·1,·'gmx::PairlistSets::PairlistSets()']
95 ····]],95 ····]],
96 ····['pairlistsets_2eh_59',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],96 ····['pairlistsets_2eh_59',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],
97 ····['pairlisttype_60',·['pairlisttype',·['../namespacegmx.xhtml#a988b986d35cacb4d435767ea6c57a0b5',·1,·'gmx::PairlistType'],97 ····['pairlisttype_60',·['pairlisttype',·['../namespacegmx.xhtml#a988b986d35cacb4d435767ea6c57a0b5',·1,·'gmx::PairlistType'],
98 ········['../structgmx_1_1PairlistParams.xhtml#a2c83e42e8b3694d16f22bf12c5d9f7e2',·1,·'gmx::PairlistParams::pairlistType']98 ········['../structgmx_1_1PairlistParams.xhtml#a2c83e42e8b3694d16f22bf12c5d9f7e2',·1,·'gmx::PairlistParams::pairlistType']
99 ····]],99 ····]],
100 ····['pairlisttype_5f_61',·['pairlistType_',·['../structgmx_1_1Grid_1_1Geometry.xhtml#a8ded14d0f33cf006304ac9a707cbef4a',·1,·'gmx::Grid::Geometry']]],100 ····['pairlisttype_5f_61',·['pairlistType_',·['../structgmx_1_1Grid_1_1Geometry.xhtml#a8ded14d0f33cf006304ac9a707cbef4a',·1,·'gmx::Grid::Geometry']]],
101 ····['pairlistwork_2ecpp_62',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],101 ····['pairlistwork_2ecpp_62',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],
102 ····['pairlistwork_2eh_63',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],102 ····['pairlistwork_2eh_63',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],
103 ····['pairs_64',·['Pairs',·['../classListedForces.xhtml#a73e4fa54dfd332da42036d5ae893da47aa07a589a90362b3346324844a3ad87ff',·1,·'ListedForces']]],103 ····['pairs_64',·['Pairs',·['../classListedForces.xhtml#a73e4fa54dfd332da42036d5ae893da47aa07a589a90362b3346324844a3ad87ff',·1,·'ListedForces']]],
104 ····['pairs_2ecpp_65',·['pairs.cpp',·['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],104 ····['pairs_2ecpp_65',·['pairs.cpp',·['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],
105 ········['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)']105 ········['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)']
106 ····]],106 ····]],
107 ····['pairs_2eh_66',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],107 ····['pairs_2eh_66',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],
 108 ····['pairsearch_67',·['pairsearch',·['../classgmx_1_1PairSearch.xhtml',·1,·'gmx::PairSearch'],
108 ····['pairsearch_67',·['pairsearch',·['../classgmx_1_1PairSearch.xhtml#ac9f08e8fa6d40c6761e97e8b2839e23e',·1,·'gmx::PairSearch::PairSearch()'],109 ········['../classgmx_1_1PairSearch.xhtml#ac9f08e8fa6d40c6761e97e8b2839e23e',·1,·'gmx::PairSearch::PairSearch()']
109 ········['../classgmx_1_1PairSearch.xhtml',·1,·'gmx::PairSearch'] 
110 ····]],110 ····]],
111 ····['pairsearch_2ecpp_68',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],111 ····['pairsearch_2ecpp_68',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],
112 ····['pairsearch_2eh_69',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],112 ····['pairsearch_2eh_69',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],
113 ····['pairsearchcoordinates_70',·['pairSearchCoordinates',·['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#af18643a5c0d8729b32e688d45fd7f8ca',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator']]],113 ····['pairsearchcoordinates_70',·['pairSearchCoordinates',·['../classanonymous__namespace_02minimize_8cpp_03_1_1EnergyEvaluator.xhtml#af18643a5c0d8729b32e688d45fd7f8ca',·1,·'anonymous_namespace{minimize.cpp}::EnergyEvaluator']]],
114 ····['pairsearchwork_71',·['PairsearchWork',·['../structgmx_1_1PairsearchWork.xhtml',·1,·'gmx']]],114 ····['pairsearchwork_71',·['PairsearchWork',·['../structgmx_1_1PairsearchWork.xhtml',·1,·'gmx']]],
115 ····['paragraphbreak_72',·['paragraphBreak',·['../classgmx_1_1HelpWriterContext.xhtml#a6c24ca1470b3addda69ae236a6ea66b2',·1,·'gmx::HelpWriterContext']]],115 ····['paragraphbreak_72',·['paragraphBreak',·['../classgmx_1_1HelpWriterContext.xhtml#a6c24ca1470b3addda69ae236a6ea66b2',·1,·'gmx::HelpWriterContext']]],
116 ····['parallel_5f3dfft_5fexecute_5fgpu_5fwrapper_73',·['parallel_3dfft_execute_gpu_wrapper',·['../pme__gpu_8cpp.xhtml#a13b15b5d3a7003ff0dfdba02aadbc97e',·1,·'pme_gpu.cpp']]],116 ····['parallel_5f3dfft_5fexecute_5fgpu_5fwrapper_73',·['parallel_3dfft_execute_gpu_wrapper',·['../pme__gpu_8cpp.xhtml#a13b15b5d3a7003ff0dfdba02aadbc97e',·1,·'pme_gpu.cpp']]],
117 ····['parallelconsistencyerror_74',·['parallelconsistencyerror',·['../classgmx_1_1ParallelConsistencyError.xhtml',·1,·'gmx::ParallelConsistencyError'],117 ····['parallelconsistencyerror_74',·['parallelconsistencyerror',·['../classgmx_1_1ParallelConsistencyError.xhtml#a30850fa25d3059fa861607dd0eb20bd2',·1,·'gmx::ParallelConsistencyError::ParallelConsistencyError()'],
118 ········['../classgmx_1_1ParallelConsistencyError.xhtml#a30850fa25d3059fa861607dd0eb20bd2',·1,·'gmx::ParallelConsistencyError::ParallelConsistencyError()']118 ········['../classgmx_1_1ParallelConsistencyError.xhtml',·1,·'gmx::ParallelConsistencyError']
119 ····]],119 ····]],
120 ····['paralleldatastarted_75',·['paralleldatastarted',·['../classgmx_1_1IAnalysisDataModule.xhtml#aeca0c095b7f31aec0f58643bed0e0895',·1,·'gmx::IAnalysisDataModule::parallelDataStarted()'],120 ····['paralleldatastarted_75',·['paralleldatastarted',·['../classgmx_1_1IAnalysisDataModule.xhtml#aeca0c095b7f31aec0f58643bed0e0895',·1,·'gmx::IAnalysisDataModule::parallelDataStarted()'],
121 ········['../classgmx_1_1AnalysisDataModuleParallel.xhtml#ae58dd25d11bc02bd4af8b7f36df62edf',·1,·'gmx::AnalysisDataModuleParallel::parallelDataStarted()'],121 ········['../classgmx_1_1AnalysisDataModuleParallel.xhtml#ae58dd25d11bc02bd4af8b7f36df62edf',·1,·'gmx::AnalysisDataModuleParallel::parallelDataStarted()'],
122 ········['../classgmx_1_1AnalysisDataSimpleHistogramModule.xhtml#a3d06d76f51b9e41e945a997b21efd392',·1,·'gmx::AnalysisDataSimpleHistogramModule::parallelDataStarted()'],122 ········['../classgmx_1_1AnalysisDataSimpleHistogramModule.xhtml#a3d06d76f51b9e41e945a997b21efd392',·1,·'gmx::AnalysisDataSimpleHistogramModule::parallelDataStarted()'],
123 ········['../classgmx_1_1AnalysisDataWeightedHistogramModule.xhtml#aef9b177d826d8afe625be7056ef2c607',·1,·'gmx::AnalysisDataWeightedHistogramModule::parallelDataStarted()'],123 ········['../classgmx_1_1AnalysisDataWeightedHistogramModule.xhtml#aef9b177d826d8afe625be7056ef2c607',·1,·'gmx::AnalysisDataWeightedHistogramModule::parallelDataStarted()'],
124 ········['../classgmx_1_1AnalysisDataProxy.xhtml#af4720264b81a508876c8e21731585ab0',·1,·'gmx::AnalysisDataProxy::parallelDataStarted()']124 ········['../classgmx_1_1AnalysisDataProxy.xhtml#af4720264b81a508876c8e21731585ab0',·1,·'gmx::AnalysisDataProxy::parallelDataStarted()']
125 ····]],125 ····]],
126 ····['parallelizable_20handling_20of_20output_20data_20analysisdata_76',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]],126 ····['parallelizable_20handling_20of_20output_20data_20analysisdata_76',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]],
127 ····['parallelization_77',·['Parallelization',·['../page_analysisdata.xhtml#section_analysisdata_parallelization',·1,·'']]],127 ····['parallelization_77',·['Parallelization',·['../page_analysisdata.xhtml#section_analysisdata_parallelization',·1,·'']]],
128 ····['parallelization_20over_20mpi_78',·['Spatial·domain·decomposition·(for·parallelization·over·MPI)',·['../group__module__domdec.xhtml',·1,·'']]],128 ····['parallelization_20over_20mpi_78',·['Spatial·domain·decomposition·(for·parallelization·over·MPI)',·['../group__module__domdec.xhtml',·1,·'']]],
129 ····['parallelizationfactor_79',·['parallelizationFactor',·['../classgmx_1_1AnalysisDataParallelOptions.xhtml#ad581353e29513839c7ab04f429f50b61',·1,·'gmx::AnalysisDataParallelOptions']]],129 ····['parallelizationfactor_79',·['parallelizationFactor',·['../classgmx_1_1AnalysisDataParallelOptions.xhtml#ad581353e29513839c7ab04f429f50b61',·1,·'gmx::AnalysisDataParallelOptions']]],
130 ····['paralleloptions_2eh_80',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],130 ····['paralleloptions_2eh_80',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],
131 ····['parallelselection_81',·['parallelSelection',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4e23dbf4cfd2554ac011664b49c1c7e0',·1,·'gmx::TrajectoryAnalysisModuleData']]],131 ····['parallelselection_81',·['parallelSelection',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4e23dbf4cfd2554ac011664b49c1c7e0',·1,·'gmx::TrajectoryAnalysisModuleData']]],
132 ····['parallelselections_82',·['parallelSelections',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4ffe3dec6ef34ae7e6af7a46b9fc7d0b',·1,·'gmx::TrajectoryAnalysisModuleData']]],132 ····['parallelselections_82',·['parallelSelections',·['../classgmx_1_1TrajectoryAnalysisModuleData.xhtml#a4ffe3dec6ef34ae7e6af7a46b9fc7d0b',·1,·'gmx::TrajectoryAnalysisModuleData']]],
133 ····['param_83',·['param',·['../classgmx_1_1UniformRealDistribution.xhtml#a267faab6d4cd2e017603fe0f73500c38',·1,·'gmx::UniformRealDistribution::param()'], 
134 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ace6c727298fe514a14a114f41d00e206',·1,·'gmx::TabulatedNormalDistribution::param()'],133 ····['param_83',·['param',·['../classgmx_1_1TabulatedNormalDistribution.xhtml#ace6c727298fe514a14a114f41d00e206',·1,·'gmx::TabulatedNormalDistribution::param()'],
 134 ········['../classgmx_1_1UniformRealDistribution.xhtml#a267faab6d4cd2e017603fe0f73500c38',·1,·'gmx::UniformRealDistribution::param()'],
135 ········['../classgmx_1_1NormalDistribution.xhtml#adaa8c7d5f4803f33e80d1811aa0af1f8',·1,·'gmx::NormalDistribution::param()'],135 ········['../classgmx_1_1NormalDistribution.xhtml#adaa8c7d5f4803f33e80d1811aa0af1f8',·1,·'gmx::NormalDistribution::param()'],
136 ········['../classgmx_1_1SelectionTreeElement.xhtml#a0b4956164b6ed61094a550099fa90d3b',·1,·'gmx::SelectionTreeElement::param'],136 ········['../classgmx_1_1SelectionTreeElement.xhtml#a0b4956164b6ed61094a550099fa90d3b',·1,·'gmx::SelectionTreeElement::param'],
137 ········['../structgmx__ana__selmethod__t.xhtml#afd48ccc940b2c37d46c65bbeb5fb7ff3',·1,·'gmx_ana_selmethod_t::param'],137 ········['../structgmx__ana__selmethod__t.xhtml#afd48ccc940b2c37d46c65bbeb5fb7ff3',·1,·'gmx_ana_selmethod_t::param'],
138 ········['../classgmx_1_1ExponentialDistribution.xhtml#ac5071065401d78716721b2d8512b9f75',·1,·'gmx::ExponentialDistribution::param()'],138 ········['../classgmx_1_1ExponentialDistribution.xhtml#ac5071065401d78716721b2d8512b9f75',·1,·'gmx::ExponentialDistribution::param()'],
139 ········['../classgmx_1_1GammaDistribution.xhtml#a35f0e16a9da71056786953c5095ae334',·1,·'gmx::GammaDistribution::param()'],139 ········['../classgmx_1_1GammaDistribution.xhtml#a35f0e16a9da71056786953c5095ae334',·1,·'gmx::GammaDistribution::param()'],
140 ········['../classgmx_1_1UniformIntDistribution.xhtml#a843c35d5997b5075c35125a57cd6b937',·1,·'gmx::UniformIntDistribution::param()']140 ········['../classgmx_1_1UniformIntDistribution.xhtml#a843c35d5997b5075c35125a57cd6b937',·1,·'gmx::UniformIntDistribution::param()']
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239 ····['particles_144',·['Interactions·between·lists·of·particles',·['../group__module__listed__forces.xhtml',·1,·'']]],239 ····['particles_144',·['Interactions·between·lists·of·particles',·['../group__module__listed__forces.xhtml',·1,·'']]],
240 ····['particletypenamea_145',·['particleTypeNameA',·['../classSimulationParticle.xhtml#a496a7fbd86890361e14206c021119b06',·1,·'SimulationParticle']]],240 ····['particletypenamea_145',·['particleTypeNameA',·['../classSimulationParticle.xhtml#a496a7fbd86890361e14206c021119b06',·1,·'SimulationParticle']]],
241 ····['particletypenameb_146',·['particleTypeNameB',·['../classSimulationParticle.xhtml#af0b80a3f5d5a292d6a6eca327b34b2cc',·1,·'SimulationParticle']]],241 ····['particletypenameb_146',·['particleTypeNameB',·['../classSimulationParticle.xhtml#af0b80a3f5d5a292d6a6eca327b34b2cc',·1,·'SimulationParticle']]],
242 ····['partition_147',·['partition',·['../structpartition.xhtml',·1,·'']]],242 ····['partition_147',·['partition',·['../structpartition.xhtml',·1,·'']]],
243 ····['partition_2ecpp_148',·['partition.cpp',·['../partition_8cpp.xhtml',·1,·'']]],243 ····['partition_2ecpp_148',·['partition.cpp',·['../partition_8cpp.xhtml',·1,·'']]],
244 ····['partition_2eh_149',·['partition.h',·['../partition_8h.xhtml',·1,·'']]],244 ····['partition_2eh_149',·['partition.h',·['../partition_8h.xhtml',·1,·'']]],
245 ····['partlyuniformdiagonal_150',·['PartlyUniformDiagonal',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a776ec8348aff2ffd8b62d32d6c54bbeaa38d3d821130dde2b2f53b5301598da2e',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],245 ····['partlyuniformdiagonal_150',·['PartlyUniformDiagonal',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a776ec8348aff2ffd8b62d32d6c54bbeaa38d3d821130dde2b2f53b5301598da2e',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],
246 ····['path_2ecpp_151',·['path.cpp',·['../path_8cpp.xhtml',·1,·'(Global·Namespace)'],246 ····['path_2ecpp_151',·['path.cpp',·['../tests_2path_8cpp.xhtml',·1,·'(Global·Namespace)'],
247 ········['../tests_2path_8cpp.xhtml',·1,·'(Global·Namespace)']247 ········['../path_8cpp.xhtml',·1,·'(Global·Namespace)']
248 ····]],248 ····]],
249 ····['path_2eh_152',·['path.h',·['../path_8h.xhtml',·1,·'']]],249 ····['path_2eh_152',·['path.h',·['../path_8h.xhtml',·1,·'']]],
 250 ····['path_5f_153',·['path_',·['../structgmx_1_1InstallationPrefixInfo.xhtml#a6c5de6c41408d0cf40a07deb808d47fb',·1,·'gmx::InstallationPrefixInfo::path_'],
250 ····['path_5f_153',·['path_',·['../classgmx_1_1test_1_1TestReferenceChecker_1_1Impl.xhtml#ae864c01ce9412c5674de823de8c0effb',·1,·'gmx::test::TestReferenceChecker::Impl::path_'],251 ········['../classgmx_1_1test_1_1TestReferenceChecker_1_1Impl.xhtml#ae864c01ce9412c5674de823de8c0effb',·1,·'gmx::test::TestReferenceChecker::Impl::path_']
251 ········['../structgmx_1_1InstallationPrefixInfo.xhtml#a6c5de6c41408d0cf40a07deb808d47fb',·1,·'gmx::InstallationPrefixInfo::path_'] 
252 ····]],252 ····]],
253 ····['pause_154',·['Pause',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a105b296a83f9c105355403f3332af50f',·1,·'gmx']]],253 ····['pause_154',·['Pause',·['../namespacegmx.xhtml#aa72f45c17038ea5aae00ba6b17cab901a105b296a83f9c105355403f3332af50f',·1,·'gmx']]],
254 ····['pbc_155',·['pbc',·['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::Pbc'], 
255 ········['../classgmx_1_1VirtualSitesHandler.xhtml#a9bc9f8f9c0f9558d09bf4b5ed0273e3ba0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::VirtualSitesHandler::Pbc'],254 ····['pbc_155',·['pbc',·['../classgmx_1_1VirtualSitesHandler.xhtml#a9bc9f8f9c0f9558d09bf4b5ed0273e3ba0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::VirtualSitesHandler::Pbc'],
256 ········['../classgmx_1_1TrajectoryFrame.xhtml#a582f593e420137d31acaf230d0b0f4c3',·1,·'gmx::TrajectoryFrame::pbc()'],255 ········['../classgmx_1_1TrajectoryFrame.xhtml#a582f593e420137d31acaf230d0b0f4c3',·1,·'gmx::TrajectoryFrame::pbc()'],
257 ········['../structt__swap.xhtml#aa56af1174023261f045e7846a7736772',·1,·'t_swap::pbc'],256 ········['../structt__swap.xhtml#aa56af1174023261f045e7846a7736772',·1,·'t_swap::pbc'],
258 ········['../structgmx__sel__evaluate__t.xhtml#ad45dbdc326186b045973ef3ba68bf677',·1,·'gmx_sel_evaluate_t::pbc']257 ········['../structgmx__sel__evaluate__t.xhtml#ad45dbdc326186b045973ef3ba68bf677',·1,·'gmx_sel_evaluate_t::pbc'],
 258 ········['../namespacegmx.xhtml#a63cf11bdf7c50436e7a754d50689f362a0fa76fc9cd273da2983f32b5f228e490',·1,·'gmx::Pbc']
259 ····]],259 ····]],
260 ····['pbc_2ecpp_156',·['pbc.cpp',·['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],260 ····['pbc_2ecpp_156',·['pbc.cpp',·['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],
261 ········['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)']261 ········['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)']
262 ····]],262 ····]],
263 ····['pbc_5f_157',·['pbc_',·['../structgmx_1_1SelMethodEvalContext.xhtml#ab12ab95ec24bd1ca9d76d39ed729005b',·1,·'gmx::SelMethodEvalContext']]],263 ····['pbc_5f_157',·['pbc_',·['../structgmx_1_1SelMethodEvalContext.xhtml#ab12ab95ec24bd1ca9d76d39ed729005b',·1,·'gmx::SelMethodEvalContext']]],
264 ····['pbc_5faiuc_2eh_158',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],264 ····['pbc_5faiuc_2eh_158',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],
265 ····['pbc_5faiuc_5fsycl_2eh_159',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],265 ····['pbc_5faiuc_5fsycl_2eh_159',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],
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14 ····['qminput_5f_8',·['qmInput_',·['../structgmx_1_1QMMMParameters.xhtml#a7674a3c259e4898d8aa6318e84bc6e30',·1,·'gmx::QMMMParameters']]],14 ····['qminput_5f_8',·['qmInput_',·['../structgmx_1_1QMMMParameters.xhtml#a7674a3c259e4898d8aa6318e84bc6e30',·1,·'gmx::QMMMParameters']]],
15 ····['qminputfilename_9',·['QMInputFileName',·['../structgmx_1_1QMInputFileName.xhtml',·1,·'gmx']]],15 ····['qminputfilename_9',·['QMInputFileName',·['../structgmx_1_1QMInputFileName.xhtml',·1,·'gmx']]],
16 ····['qminputfilename_5f_10',·['qmInputFileName_',·['../structgmx_1_1QMInputFileName.xhtml#a9ac3efe1c20d50610639261468b53431',·1,·'gmx::QMInputFileName']]],16 ····['qminputfilename_5f_10',·['qmInputFileName_',·['../structgmx_1_1QMInputFileName.xhtml#a9ac3efe1c20d50610639261468b53431',·1,·'gmx::QMInputFileName']]],
17 ····['qmmethod_5f_11',·['qmMethod_',·['../structgmx_1_1QMMMParameters.xhtml#a7fda0bb8e38552a5c15354eadf9c23ac',·1,·'gmx::QMMMParameters']]],17 ····['qmmethod_5f_11',·['qmMethod_',·['../structgmx_1_1QMMMParameters.xhtml#a7fda0bb8e38552a5c15354eadf9c23ac',·1,·'gmx::QMMMParameters']]],
18 ····['qmmm_12',·['qmmm',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM'],18 ····['qmmm_12',·['qmmm',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM'],
19 ········['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml#ac2fa5d36187e29b84a608477b6f2777c',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM::QMMM()']19 ········['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMM.xhtml#ac2fa5d36187e29b84a608477b6f2777c',·1,·'gmx::anonymous_namespace{qmmm.cpp}::QMMM::QMMM()']
20 ····]],20 ····]],
21 ····['qmmm_2ecpp_13',·['qmmm.cpp',·['../tests_2qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'],21 ····['qmmm_2ecpp_13',·['qmmm.cpp',·['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)'],
22 ········['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)']22 ········['../tests_2qmmm_8cpp.xhtml',·1,·'(Global·Namespace)']
23 ····]],23 ····]],
24 ····['qmmm_2eh_14',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]],24 ····['qmmm_2eh_14',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]],
25 ····['qmmmforceprovider_15',·['QMMMForceProvider',·['../classgmx_1_1QMMMForceProvider.xhtml',·1,·'gmx']]],25 ····['qmmmforceprovider_15',·['QMMMForceProvider',·['../classgmx_1_1QMMMForceProvider.xhtml',·1,·'gmx']]],
26 ····['qmmmforceprovider_2ecpp_16',·['qmmmforceprovider.cpp',·['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],26 ····['qmmmforceprovider_2ecpp_16',·['qmmmforceprovider.cpp',·['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
27 ········['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']27 ········['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
28 ····]],28 ····]],
29 ····['qmmmforceprovider_2eh_17',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],29 ····['qmmmforceprovider_2eh_17',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],
30 ····['qmmmforceprovider_5fstub_2ecpp_18',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],30 ····['qmmmforceprovider_5fstub_2ecpp_18',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],
 31 ····['qmmminputgenerator_19',·['qmmminputgenerator',·['../classgmx_1_1QMMMInputGenerator.xhtml',·1,·'gmx::QMMMInputGenerator'],
31 ····['qmmminputgenerator_19',·['qmmminputgenerator',·['../classgmx_1_1QMMMInputGenerator.xhtml#aa0847e6ee608ea7444b36c9db6e0bdd6',·1,·'gmx::QMMMInputGenerator::QMMMInputGenerator()'],32 ········['../classgmx_1_1QMMMInputGenerator.xhtml#aa0847e6ee608ea7444b36c9db6e0bdd6',·1,·'gmx::QMMMInputGenerator::QMMMInputGenerator()']
32 ········['../classgmx_1_1QMMMInputGenerator.xhtml',·1,·'gmx::QMMMInputGenerator'] 
33 ····]],33 ····]],
34 ····['qmmminputgenerator_2ecpp_20',·['qmmminputgenerator.cpp',·['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],34 ····['qmmminputgenerator_2ecpp_20',·['qmmminputgenerator.cpp',·['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],
35 ········['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']35 ········['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']
36 ····]],36 ····]],
37 ····['qmmminputgenerator_2eh_21',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],37 ····['qmmminputgenerator_2eh_21',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],
38 ····['qmmmmdptransformfromstring_22',·['QMMMMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02qmmmoptions_8cpp_03.xhtml#a704afcf71de3ae29cf3c3a260c8e8e0c',·1,·'gmx::anonymous_namespace{qmmmoptions.cpp}']]],38 ····['qmmmmdptransformfromstring_22',·['QMMMMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02qmmmoptions_8cpp_03.xhtml#a704afcf71de3ae29cf3c3a260c8e8e0c',·1,·'gmx::anonymous_namespace{qmmmoptions.cpp}']]],
39 ····['qmmmmoduleinfo_23',·['QMMMModuleInfo',·['../structgmx_1_1QMMMModuleInfo.xhtml',·1,·'gmx']]],39 ····['qmmmmoduleinfo_23',·['QMMMModuleInfo',·['../structgmx_1_1QMMMModuleInfo.xhtml',·1,·'gmx']]],
40 ····['qmmmoptions_24',·['QMMMOptions',·['../classgmx_1_1QMMMOptions.xhtml',·1,·'gmx']]],40 ····['qmmmoptions_24',·['QMMMOptions',·['../classgmx_1_1QMMMOptions.xhtml',·1,·'gmx']]],
41 ····['qmmmoptions_2ecpp_25',·['qmmmoptions.cpp',·['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],41 ····['qmmmoptions_2ecpp_25',·['qmmmoptions.cpp',·['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
42 ········['../tests_2qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']42 ········['../qmmmoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
43 ····]],43 ····]],
44 ····['qmmmoptions_2eh_26',·['qmmmoptions.h',·['../qmmmoptions_8h.xhtml',·1,·'']]],44 ····['qmmmoptions_2eh_26',·['qmmmoptions.h',·['../qmmmoptions_8h.xhtml',·1,·'']]],
45 ····['qmmmoutputprovider_27',·['QMMMOutputProvider',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMMOutputProvider.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}']]],45 ····['qmmmoutputprovider_27',·['QMMMOutputProvider',·['../classgmx_1_1anonymous__namespace_02qmmm_8cpp_03_1_1QMMMOutputProvider.xhtml',·1,·'gmx::anonymous_namespace{qmmm.cpp}']]],
46 ····['qmmmparameters_28',·['qmmmparameters',·['../structgmx_1_1QMMMParameters.xhtml#a275f36e517da6e79cc9b029dca05e559',·1,·'gmx::QMMMParameters::QMMMParameters()'],46 ····['qmmmparameters_28',·['qmmmparameters',·['../structgmx_1_1QMMMParameters.xhtml#a275f36e517da6e79cc9b029dca05e559',·1,·'gmx::QMMMParameters::QMMMParameters()'],
47 ········['../structgmx_1_1QMMMParameters.xhtml',·1,·'gmx::QMMMParameters']47 ········['../structgmx_1_1QMMMParameters.xhtml',·1,·'gmx::QMMMParameters']
48 ····]],48 ····]],
49 ····['qmmmqmmethod_29',·['QMMMQMMethod',·['../namespacegmx.xhtml#ae35b2c8b377f35030a2b9dfb697e2ea3',·1,·'gmx']]],49 ····['qmmmqmmethod_29',·['QMMMQMMethod',·['../namespacegmx.xhtml#ae35b2c8b377f35030a2b9dfb697e2ea3',·1,·'gmx']]],
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Offset 86, 20 lines modifiedOffset 86, 20 lines modified
86 ········['../structgmx_1_1NBParamGpu.xhtml#a95f083fe552f034c73ef2ad874502bbb',·1,·'gmx::NBParamGpu::rcoulomb_sq']86 ········['../structgmx_1_1NBParamGpu.xhtml#a95f083fe552f034c73ef2ad874502bbb',·1,·'gmx::NBParamGpu::rcoulomb_sq']
87 ····]],87 ····]],
88 ····['rcp_50',·['rcp',·['../group__module__simd.xhtml#ga4c2c3eae5c42d898373ec6e90dd99064',·1,·'gmx::rcp(SimdDouble·x)'],88 ····['rcp_50',·['rcp',·['../group__module__simd.xhtml#ga4c2c3eae5c42d898373ec6e90dd99064',·1,·'gmx::rcp(SimdDouble·x)'],
89 ········['../group__module__simd.xhtml#ga48cb29271cf7ac44a06cfe20e5c29dc2',·1,·'gmx::rcp(SimdFloat·x)']89 ········['../group__module__simd.xhtml#ga48cb29271cf7ac44a06cfe20e5c29dc2',·1,·'gmx::rcp(SimdFloat·x)']
90 ····]],90 ····]],
91 ····['rcut_5fcoulomb_51',·['rcut_coulomb',·['../structpme__setup__t.xhtml#a10b26bc4762a645db835d9e55df7324c',·1,·'pme_setup_t']]],91 ····['rcut_5fcoulomb_51',·['rcut_coulomb',·['../structpme__setup__t.xhtml#a10b26bc4762a645db835d9e55df7324c',·1,·'pme_setup_t']]],
92 ····['rdf_52',·['Rdf',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1Rdf.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]],92 ····['rdf_52',·['Rdf',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1Rdf.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]],
93 ····['rdf_2ecpp_53',·['rdf.cpp',·['../tests_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)'],93 ····['rdf_2ecpp_53',·['rdf.cpp',·['../modules_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)'],
94 ········['../modules_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)']94 ········['../tests_2rdf_8cpp.xhtml',·1,·'(Global·Namespace)']
95 ····]],95 ····]],
96 ····['rdf_2eh_54',·['rdf.h',·['../rdf_8h.xhtml',·1,·'']]],96 ····['rdf_2eh_54',·['rdf.h',·['../rdf_8h.xhtml',·1,·'']]],
 97 ····['rdfmoduledata_55',·['rdfmoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData'],
97 ····['rdfmoduledata_55',·['rdfmoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml#a1aaa209e9ec17919e6ed89cd2ba508d6',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData::RdfModuleData()'[·...·truncated·by·diffoscope;·len:·2,·SHA:·39d4b54e0416be65f3fcb26963ff2c5c40153a3b4044179d7d7c8a6ca2f2bf87·...·]98 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml#a1aaa209e9ec17919e6ed89cd2ba508d6',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData::RdfModuleData()']
98 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02rdf_8cpp_03_1_1RdfModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}::RdfModuleData'] 
99 ····]],99 ····]],
100 ····['rdfmoduletest_56',·['RdfModuleTest',·['../namespacegmx_1_1test_1_1anonymous__namespace_02rdf_8cpp_03.xhtml#a985b877a009ae52e74963658758768f4',·1,·'gmx::test::anonymous_namespace{rdf.cpp}']]],100 ····['rdfmoduletest_56',·['RdfModuleTest',·['../namespacegmx_1_1test_1_1anonymous__namespace_02rdf_8cpp_03.xhtml#a985b877a009ae52e74963658758768f4',·1,·'gmx::test::anonymous_namespace{rdf.cpp}']]],
101 ····['reactionfieldexclusioncorrection_57',·['reactionFieldExclusionCorrection',·['../namespacegmx.xhtml#a43575bc1288fed7c33e5ff7cb9e93f1d',·1,·'gmx']]],101 ····['reactionfieldexclusioncorrection_57',·['reactionFieldExclusionCorrection',·['../namespacegmx.xhtml#a43575bc1288fed7c33e5ff7cb9e93f1d',·1,·'gmx']]],
102 ····['read_5fatype_58',·['read_atype',·['../resall_8h.xhtml#af588ee5713ff8f37bcf2357f531f7b09',·1,·'resall.cpp']]],102 ····['read_5fatype_58',·['read_atype',·['../resall_8h.xhtml#af588ee5713ff8f37bcf2357f531f7b09',·1,·'resall.cpp']]],
103 ····['read_5fedi_59',·['read_edi',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a2cbcc925e9a35783deee0b265aa47833',·1,·'anonymous_namespace{edsam.cpp}']]],103 ····['read_5fedi_59',·['read_edi',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a2cbcc925e9a35783deee0b265aa47833',·1,·'anonymous_namespace{edsam.cpp}']]],
104 ····['read_5fedi_5ffile_60',·['read_edi_file',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a555d9bb4317e61e30b190cef73648f46',·1,·'anonymous_namespace{edsam.cpp}']]],104 ····['read_5fedi_5ffile_60',·['read_edi_file',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a555d9bb4317e61e30b190cef73648f46',·1,·'anonymous_namespace{edsam.cpp}']]],
105 ····['read_5fedvec_61',·['read_edvec',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a07611fa77decbecebabdff242b923c51',·1,·'anonymous_namespace{edsam.cpp}']]],105 ····['read_5fedvec_61',·['read_edvec',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#a07611fa77decbecebabdff242b923c51',·1,·'anonymous_namespace{edsam.cpp}']]],
Offset 107, 18 lines modifiedOffset 107, 18 lines modified
107 ····['read_5fpull_5fxf_63',·['read_pull_xf',·['../gmx__wham_8cpp.xhtml#a3b6881c8a81744c8faa70b8a461a5cd1',·1,·'gmx_wham.cpp']]],107 ····['read_5fpull_5fxf_63',·['read_pull_xf',·['../gmx__wham_8cpp.xhtml#a3b6881c8a81744c8faa70b8a461a5cd1',·1,·'gmx_wham.cpp']]],
108 ····['read_5ftpr_5fheader_64',·['read_tpr_header',·['../gmx__wham_8cpp.xhtml#a7722683aae4a7fbeca3de229f7efedab',·1,·'gmx_wham.cpp']]],108 ····['read_5ftpr_5fheader_64',·['read_tpr_header',·['../gmx__wham_8cpp.xhtml#a7722683aae4a7fbeca3de229f7efedab',·1,·'gmx_wham.cpp']]],
109 ····['read_5ftpr_5fpullxf_5ffiles_65',·['read_tpr_pullxf_files',·['../gmx__wham_8cpp.xhtml#a9adfb4b234ea6645e67a85f6b1503fc5',·1,·'gmx_wham.cpp']]],109 ····['read_5ftpr_5fpullxf_5ffiles_65',·['read_tpr_pullxf_files',·['../gmx__wham_8cpp.xhtml#a9adfb4b234ea6645e67a85f6b1503fc5',·1,·'gmx_wham.cpp']]],
110 ····['read_5fwham_5fin_66',·['read_wham_in',·['../gmx__wham_8cpp.xhtml#a2b227e67bccc413b5352a9011f9dd2ce',·1,·'gmx_wham.cpp']]],110 ····['read_5fwham_5fin_66',·['read_wham_in',·['../gmx__wham_8cpp.xhtml#a2b227e67bccc413b5352a9011f9dd2ce',·1,·'gmx_wham.cpp']]],
111 ····['readall_67',·['readAll',·['../classgmx_1_1TextReader.xhtml#a0fe2f628d9f57041bd5c14a712e5c0b1',·1,·'gmx::TextReader']]],111 ····['readall_67',·['readAll',·['../classgmx_1_1TextReader.xhtml#a0fe2f628d9f57041bd5c14a712e5c0b1',·1,·'gmx::TextReader']]],
112 ····['readatomicstructurefactors_68',·['readAtomicStructureFactors',·['../namespacegmx.xhtml#a2a8d393afe70146222257f8bb955b627',·1,·'gmx']]],112 ····['readatomicstructurefactors_68',·['readAtomicStructureFactors',·['../namespacegmx.xhtml#a2a8d393afe70146222257f8bb955b627',·1,·'gmx']]],
113 ····['readcharbufferfromfile_69',·['readCharBufferFromFile',·['../namespacegmx_1_1anonymous__namespace_02mrcdensitymap_8cpp_03.xhtml#a251ae26a44272d5cd9fcf0f78898d0aa',·1,·'gmx::anonymous_namespace{mrcdensitymap.cpp}']]],113 ····['readcharbufferfromfile_69',·['readCharBufferFromFile',·['../namespacegmx_1_1anonymous__namespace_02mrcdensitymap_8cpp_03.xhtml#a251ae26a44272d5cd9fcf0f78898d0aa',·1,·'gmx::anonymous_namespace{mrcdensitymap.cpp}']]],
114 ····['readcheckpoint_70',·['readcheckpoint',·['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#ad15e911e803e015e6473f7c1eb7f281c',·1,·'gmx::NoseHooverTemperatureCoupling::readCheckpoint()'],114 ····['readcheckpoint_70',·['readcheckpoint',·['../classgmx_1_1ITemperatureCouplingImpl.xhtml#a94f280e3751b37b4b109a5ff63054b74',·1,·'gmx::ITemperatureCouplingImpl::readCheckpoint()'],
115 ········['../classgmx_1_1BerendsenTemperatureCoupling.xhtml#aa01f54a2056e9aa0a6fa87d52c4d027f',·1,·'gmx::BerendsenTemperatureCoupling::readCheckpoint()'], 
116 ········['../classgmx_1_1VRescaleTemperatureCoupling.xhtml#a90f8b87a5b2b0416bab500aebe63a996',·1,·'gmx::VRescaleTemperatureCoupling::readCheckpoint()'],115 ········['../classgmx_1_1VRescaleTemperatureCoupling.xhtml#a90f8b87a5b2b0416bab500aebe63a996',·1,·'gmx::VRescaleTemperatureCoupling::readCheckpoint()'],
117 ········['../classgmx_1_1ITemperatureCouplingImpl.xhtml#a94f280e3751b37b4b109a5ff63054b74',·1,·'gmx::ITemperatureCouplingImpl::readCheckpoint()']116 ········['../classgmx_1_1BerendsenTemperatureCoupling.xhtml#aa01f54a2056e9aa0a6fa87d52c4d027f',·1,·'gmx::BerendsenTemperatureCoupling::readCheckpoint()'],
 117 ········['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#ad15e911e803e015e6473f7c1eb7f281c',·1,·'gmx::NoseHooverTemperatureCoupling::readCheckpoint()']
118 ····]],118 ····]],
119 ····['readcheckpointdata_71',·['ReadCheckpointData',·['../namespacegmx.xhtml#abd9cf155c3e31c8c699051ad1dea3d3b',·1,·'gmx']]],119 ····['readcheckpointdata_71',·['ReadCheckpointData',·['../namespacegmx.xhtml#abd9cf155c3e31c8c699051ad1dea3d3b',·1,·'gmx']]],
120 ····['readcheckpointdataholder_72',·['ReadCheckpointDataHolder',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml',·1,·'gmx']]],120 ····['readcheckpointdataholder_72',·['ReadCheckpointDataHolder',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml',·1,·'gmx']]],
121 ····['readcheckpointtotrxframe_73',·['readcheckpointtotrxframe',·['../classgmx_1_1FreeEnergyPerturbationData.xhtml#a7dd83b0ad9158a757e111837bc404731',·1,·'gmx::FreeEnergyPerturbationData::readCheckpointToTrxFrame()'],121 ····['readcheckpointtotrxframe_73',·['readcheckpointtotrxframe',·['../classgmx_1_1FreeEnergyPerturbationData.xhtml#a7dd83b0ad9158a757e111837bc404731',·1,·'gmx::FreeEnergyPerturbationData::readCheckpointToTrxFrame()'],
122 ········['../classgmx_1_1ModularSimulator.xhtml#a14f99d57fa6ff26d83990460b8e0e097',·1,·'gmx::ModularSimulator::readCheckpointToTrxFrame()'],122 ········['../classgmx_1_1ModularSimulator.xhtml#a14f99d57fa6ff26d83990460b8e0e097',·1,·'gmx::ModularSimulator::readCheckpointToTrxFrame()'],
123 ········['../classgmx_1_1StatePropagatorData.xhtml#a333328298283d95aa84be76408da4a7f',·1,·'gmx::StatePropagatorData::readCheckpointToTrxFrame()']123 ········['../classgmx_1_1StatePropagatorData.xhtml#a333328298283d95aa84be76408da4a7f',·1,·'gmx::StatePropagatorData::readCheckpointToTrxFrame()']
124 ····]],124 ····]],
Offset 129, 16 lines modifiedOffset 129, 16 lines modified
129 ····['readentry_78',·['readEntry',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata__xml_8cpp_03.xhtml#aff99e1e654b284a758c0a54737bb2171',·1,·'gmx::test::anonymous_namespace{refdata_xml.cpp}']]],129 ····['readentry_78',·['readEntry',·['../namespacegmx_1_1test_1_1anonymous__namespace_02refdata__xml_8cpp_03.xhtml#aff99e1e654b284a758c0a54737bb2171',·1,·'gmx::test::anonymous_namespace{refdata_xml.cpp}']]],
130 ····['readfiletostring_79',·['readfiletostring',·['../classgmx_1_1TextReader.xhtml#a335a497245704967c1431f364ea0ca00',·1,·'gmx::TextReader::readFileToString(const·std::string·&amp;filename)'],130 ····['readfiletostring_79',·['readfiletostring',·['../classgmx_1_1TextReader.xhtml#a335a497245704967c1431f364ea0ca00',·1,·'gmx::TextReader::readFileToString(const·std::string·&amp;filename)'],
131 ········['../classgmx_1_1TextReader.xhtml#ab60a4095bedb4918dda1e2071bf36454',·1,·'gmx::TextReader::readFileToString(const·std::filesystem::path·&amp;filename)']131 ········['../classgmx_1_1TextReader.xhtml#ab60a4095bedb4918dda1e2071bf36454',·1,·'gmx::TextReader::readFileToString(const·std::filesystem::path·&amp;filename)']
132 ····]],132 ····]],
133 ····['readfloat_80',·['readFloat',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a0d317c9ca0387d6e6a7bbab7eab5533f',·1,·'gmx::test::TestReferenceChecker']]],133 ····['readfloat_80',·['readFloat',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a0d317c9ca0387d6e6a7bbab7eab5533f',·1,·'gmx::test::TestReferenceChecker']]],
134 ····['readgridsize_81',·['readGridSize',·['../pme__gather__sycl_8cpp.xhtml#afe2d46ad54be09003ac706146d2c82c1',·1,·'pme_gather_sycl.cpp']]],134 ····['readgridsize_81',·['readGridSize',·['../pme__gather__sycl_8cpp.xhtml#afe2d46ad54be09003ac706146d2c82c1',·1,·'pme_gather_sycl.cpp']]],
135 ····['readindexfromserializer_82',·['readIndexFromSerializer',·['../namespacegmx_1_1test.xhtml#aea28757b483109810d993d9d1684ad10',·1,·'gmx::test']]],135 ····['readindexfromserializer_82',·['readIndexFromSerializer',·['../namespacegmx_1_1test.xhtml#aea28757b483109810d993d9d1684ad10',·1,·'gmx::test']]],
136 ····['reading_83',·['reading',·['../classgmx_1_1ISerializer.xhtml#aa5f04de61828ef7af2c1585e3e91a277',·1,·'gmx::ISerializer::reading()'], 
137 ········['../classgmx_1_1FileIOXdrSerializer.xhtml#a7eca6d67ea8bea5006e111762492ca16',·1,·'gmx::FileIOXdrSerializer::reading()']136 ····['reading_83',·['reading',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a7eca6d67ea8bea5006e111762492ca16',·1,·'gmx::FileIOXdrSerializer::reading()'],
 137 ········['../classgmx_1_1ISerializer.xhtml#aa5f04de61828ef7af2c1585e3e91a277',·1,·'gmx::ISerializer::reading()']
138 ····]],138 ····]],
139 ····['readinp_2ecpp_84',·['readinp.cpp',·['../tests_2readinp_8cpp.xhtml',·1,·'']]],139 ····['readinp_2ecpp_84',·['readinp.cpp',·['../tests_2readinp_8cpp.xhtml',·1,·'']]],
140 ····['readint32_85',·['readInt32',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#afee39969b1f4ed1ce509bbd6bd8e9bd9',·1,·'gmx::test::TestReferenceChecker']]],140 ····['readint32_85',·['readInt32',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#afee39969b1f4ed1ce509bbd6bd8e9bd9',·1,·'gmx::test::TestReferenceChecker']]],
141 ····['readint64_86',·['readInt64',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a596176a0591133ef4331185c29cdf9c9',·1,·'gmx::test::TestReferenceChecker']]],141 ····['readint64_86',·['readInt64',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a596176a0591133ef4331185c29cdf9c9',·1,·'gmx::test::TestReferenceChecker']]],
142 ····['readinteger_87',·['readInteger',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a0202a4ac0d2c52d64122f2f9165341fe',·1,·'gmx::test::TestReferenceChecker']]],142 ····['readinteger_87',·['readInteger',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a0202a4ac0d2c52d64122f2f9165341fe',·1,·'gmx::test::TestReferenceChecker']]],
143 ····['readintegratedautocorrelationtimes_88',·['readIntegratedAutocorrelationTimes',·['../gmx__wham_8cpp.xhtml#a8ddf5450efbad4686970059912aa32d7',·1,·'gmx_wham.cpp']]],143 ····['readintegratedautocorrelationtimes_88',·['readIntegratedAutocorrelationTimes',·['../gmx__wham_8cpp.xhtml#a8ddf5450efbad4686970059912aa32d7',·1,·'gmx_wham.cpp']]],
144 ····['readinternalparametersfromkvt_89',·['readinternalparametersfromkvt',·['../classgmx_1_1ColvarsOptions.xhtml#a70d2e05f69165b9126d74813f98f23fd',·1,·'gmx::ColvarsOptions::readInternalParametersFromKvt()'],144 ····['readinternalparametersfromkvt_89',·['readinternalparametersfromkvt',·['../classgmx_1_1ColvarsOptions.xhtml#a70d2e05f69165b9126d74813f98f23fd',·1,·'gmx::ColvarsOptions::readInternalParametersFromKvt()'],
Offset 146, 36 lines modifiedOffset 146, 36 lines modified
146 ········['../classgmx_1_1QMMMOptions.xhtml#a7001a33f3f283c4912a3ab3cfdd5b0f9',·1,·'gmx::QMMMOptions::readInternalParametersFromKvt()']146 ········['../classgmx_1_1QMMMOptions.xhtml#a7001a33f3f283c4912a3ab3cfdd5b0f9',·1,·'gmx::QMMMOptions::readInternalParametersFromKvt()']
147 ····]],147 ····]],
148 ····['readir_2ecpp_90',·['readir.cpp',·['../tests_2readir_8cpp.xhtml',·1,·'']]],148 ····['readir_2ecpp_90',·['readir.cpp',·['../tests_2readir_8cpp.xhtml',·1,·'']]],
149 ····['readkvtcheckpointvalue_91',·['readkvtcheckpointvalue',·['../namespacegmx.xhtml#a05084482777d678a18da8a32b7410fba',·1,·'gmx::readKvtCheckpointValue(compat::not_null&lt;·real·*·&gt;·value,·const·std::string·&amp;name,·const·std::string·&amp;identifier,·const·KeyValueTreeObject·&amp;kvt)'],149 ····['readkvtcheckpointvalue_91',·['readkvtcheckpointvalue',·['../namespacegmx.xhtml#a05084482777d678a18da8a32b7410fba',·1,·'gmx::readKvtCheckpointValue(compat::not_null&lt;·real·*·&gt;·value,·const·std::string·&amp;name,·const·std::string·&amp;identifier,·const·KeyValueTreeObject·&amp;kvt)'],
150 ········['../namespacegmx.xhtml#acf49b322c7346edb9b5d2e5cbbff100c',·1,·'gmx::readKvtCheckpointValue(compat::not_null&lt;·std::int64_t·*·&gt;·value,·const·std::string·&amp;name,·const·std::string·&amp;identifier,·const·KeyValueTreeObject·&amp;kvt)'],150 ········['../namespacegmx.xhtml#acf49b322c7346edb9b5d2e5cbbff100c',·1,·'gmx::readKvtCheckpointValue(compat::not_null&lt;·std::int64_t·*·&gt;·value,·const·std::string·&amp;name,·const·std::string·&amp;identifier,·const·KeyValueTreeObject·&amp;kvt)'],
151 ········['../namespacegmx.xhtml#a868475d2fdb19a816c1170bd8a7e923f',·1,·'gmx::readKvtCheckpointValue(compat::not_null&lt;·ValueType·*·&gt;·value,·const·std::string·&amp;name,·const·std::string·&amp;identifier,·const·KeyValueTreeObject·&amp;kvt)']151 ········['../namespacegmx.xhtml#a868475d2fdb19a816c1170bd8a7e923f',·1,·'gmx::readKvtCheckpointValue(compat::not_null&lt;·ValueType·*·&gt;·value,·const·std::string·&amp;name,·const·std::string·&amp;identifier,·const·KeyValueTreeObject·&amp;kvt)']
152 ····]],152 ····]],
153 ····['readline_92',·['readline',·['../classgmx_1_1TextInputFile.xhtml#a22384d24f47f270203e74d1b8f765234',·1,·'gmx::TextInputFile::readLine()'], 
154 ········['../classgmx_1_1StandardInputStream.xhtml#a1c31a636987618552b18e9ec72c77400',·1,·'gmx::StandardInputStream::readLine()'],153 ····['readline_92',·['readline',·['../classgmx_1_1StandardInputStream.xhtml#a1c31a636987618552b18e9ec72c77400',·1,·'gmx::StandardInputStream::readLine()'],
 154 ········['../classgmx_1_1TextInputFile.xhtml#a22384d24f47f270203e74d1b8f765234',·1,·'gmx::TextInputFile::readLine()'],
155 ········['../classgmx_1_1StringInputStream.xhtml#a5312438a2d0d1ff527c027a4d7b5181d',·1,·'gmx::StringInputStream::readLine()'],155 ········['../classgmx_1_1StringInputStream.xhtml#a5312438a2d0d1ff527c027a4d7b5181d',·1,·'gmx::StringInputStream::readLine()'],
156 ········['../classgmx_1_1TextReader.xhtml#a8a4578260ea39592894870109d92e723',·1,·'gmx::TextReader::readLine()'],156 ········['../classgmx_1_1TextReader.xhtml#a8a4578260ea39592894870109d92e723',·1,·'gmx::TextReader::readLine()'],
157 ········['../classgmx_1_1TextInputStream.xhtml#addd5947a5b6f6065db02467d8f3c5137',·1,·'gmx::TextInputStream::readLine()']157 ········['../classgmx_1_1TextInputStream.xhtml#addd5947a5b6f6065db02467d8f3c5137',·1,·'gmx::TextInputStream::readLine()']
158 ····]],158 ····]],
159 ····['readlineimpl_93',·['readLineImpl',·['../namespacegmx_1_1anonymous__namespace_02filestream_8cpp_03.xhtml#a790ebb9ff1c047f07a40d8e253abc7e5',·1,·'gmx::anonymous_namespace{filestream.cpp}']]],159 ····['readlineimpl_93',·['readLineImpl',·['../namespacegmx_1_1anonymous__namespace_02filestream_8cpp_03.xhtml#a790ebb9ff1c047f07a40d8e253abc7e5',·1,·'gmx::anonymous_namespace{filestream.cpp}']]],
160 ····['readnextframe_94',·['readnextframe',·['../classgmx_1_1test_1_1EnergyFrameReader.xhtml#a518629ed972ceaf34296efab0fa3876e',·1,·'gmx::test::EnergyFrameReader::readNextFrame()'], 
161 ········['../classgmx_1_1test_1_1TrajectoryFrameReader.xhtml#a63117177e0d578d9a15c12db7bb9f680',·1,·'gmx::test::TrajectoryFrameReader::readNextFrame()'],160 ····['readnextframe_94',·['readnextframe',·['../classgmx_1_1test_1_1TrajectoryFrameReader.xhtml#a63117177e0d578d9a15c12db7bb9f680',·1,·'gmx::test::TrajectoryFrameReader::readNextFrame()'],
 161 ········['../classgmx_1_1test_1_1EnergyFrameReader.xhtml#a518629ed972ceaf34296efab0fa3876e',·1,·'gmx::test::EnergyFrameReader::readNextFrame()'],
162 ········['../classgmx_1_1TrajectoryAnalysisRunnerCommon.xhtml#a42ea08dac69a6d50fa38b84ec3ce513e',·1,·'gmx::TrajectoryAnalysisRunnerCommon::readNextFrame()']162 ········['../classgmx_1_1TrajectoryAnalysisRunnerCommon.xhtml#a42ea08dac69a6d50fa38b84ec3ce513e',·1,·'gmx::TrajectoryAnalysisRunnerCommon::readNextFrame()']
163 ····]],163 ····]],
164 ····['readpullcoordselection_95',·['readPullCoordSelection',·['../gmx__wham_8cpp.xhtml#aa2af34b5c91653320b8332bbf308d772',·1,·'gmx_wham.cpp']]],164 ····['readpullcoordselection_95',·['readPullCoordSelection',·['../gmx__wham_8cpp.xhtml#aa2af34b5c91653320b8332bbf308d772',·1,·'gmx_wham.cpp']]],
165 ····['readreferencedatafile_96',·['readReferenceDataFile',·['../group__module__testutils.xhtml#gaca906b8c921bc54965ffa4750d6bfbc9',·1,·'gmx::test']]],165 ····['readreferencedatafile_96',·['readReferenceDataFile',·['../group__module__testutils.xhtml#gaca906b8c921bc54965ffa4750d6bfbc9',·1,·'gmx::test']]],
166 ····['readreferencedensityfromfile_97',·['readReferenceDensityFromFile',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml#ad4e222142529fd47f5bef11ea129fc7f',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFittingSimulationParameterSetup']]],166 ····['readreferencedensityfromfile_97',·['readReferenceDensityFromFile',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml#ad4e222142529fd47f5bef11ea129fc7f',·1,·'gmx::anonymous_namespace{densityfitting.cpp}::DensityFittingSimulationParameterSetup']]],
167 ····['readresiduedatabase_98',·['readResidueDatabase',·['../resall_8h.xhtml#a50a12a882cf1a437fca36c47ce6d23d1',·1,·'resall.cpp']]],167 ····['readresiduedatabase_98',·['readResidueDatabase',·['../resall_8h.xhtml#a50a12a882cf1a437fca36c47ce6d23d1',·1,·'resall.cpp']]],
168 ····['readstate_99',·['readstate',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a14e15e0a9533b3a6d71508a927f0e5bd',·1,·'gmx::ColvarsForceProviderState::readState()'],168 ····['readstate_99',·['readstate',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a14e15e0a9533b3a6d71508a927f0e5bd',·1,·'gmx::ColvarsForceProviderState::readState()'],
169 ········['../structgmx_1_1DensityFittingForceProviderState.xhtml#a2911de3619c7d463438ddd52813ffde5',·1,·'gmx::DensityFittingForceProviderState::readState()']169 ········['../structgmx_1_1DensityFittingForceProviderState.xhtml#a2911de3619c7d463438ddd52813ffde5',·1,·'gmx::DensityFittingForceProviderState::readState()']
170 ····]],170 ····]],
171 ····['readstring_100',·['readString',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a38fcda0cfed63c609eeffe629101ce42',·1,·'gmx::test::TestReferenceChecker']]],171 ····['readstring_100',·['readString',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a38fcda0cfed63c609eeffe629101ce42',·1,·'gmx::test::TestReferenceChecker']]],
172 ····['readstringtableentry_101',·['readstringtableentry',·['../classStringTableEntry.xhtml#a14c793043038dfc8081c875bcce99bb4',·1,·'StringTableEntry::readStringTableEntry'],172 ····['readstringtableentry_101',·['readstringtableentry',·['../classStringTableEntry.xhtml#a14c793043038dfc8081c875bcce99bb4',·1,·'StringTableEntry::readStringTableEntry'],
173 ········['../symtab_8h.xhtml#a14c793043038dfc8081c875bcce99bb4',·1,·'readStringTableEntry(gmx::ISerializer·*serializer,·const·StringTable·&amp;table):&#160;symtab.cpp'], 
174 ········['../symtab_8cpp.xhtml#a14c793043038dfc8081c875bcce99bb4',·1,·'readStringTableEntry(gmx::ISerializer·*serializer,·const·StringTable·&amp;table):&#160;symtab.cpp']173 ········['../symtab_8cpp.xhtml#a14c793043038dfc8081c875bcce99bb4',·1,·'readStringTableEntry(gmx::ISerializer·*serializer,·const·StringTable·&amp;table):&#160;symtab.cpp'],
 174 ········['../symtab_8h.xhtml#a14c793043038dfc8081c875bcce99bb4',·1,·'readStringTableEntry(gmx::ISerializer·*serializer,·const·StringTable·&amp;table):&#160;symtab.cpp']
175 ····]],175 ····]],
176 ····['readtprinput_102',·['readTprInput',·['../namespacegmx_1_1test.xhtml#ad13e4bee2ef08b08bb7cbe99b5046f64',·1,·'gmx::test']]],176 ····['readtprinput_102',·['readTprInput',·['../namespacegmx_1_1test.xhtml#ad13e4bee2ef08b08bb7cbe99b5046f64',·1,·'gmx::test']]],
177 ····['readuchar_103',·['readUChar',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a74807c9db3ebc891f38a20494d2223eb',·1,·'gmx::test::TestReferenceChecker']]],177 ····['readuchar_103',·['readUChar',·['../classgmx_1_1test_1_1TestReferenceChecker.xhtml#a74807c9db3ebc891f38a20494d2223eb',·1,·'gmx::test::TestReferenceChecker']]],
178 ····['readuserpmfandtargetdistribution_104',·['readUserPmfAndTargetDistribution',·['../namespacegmx.xhtml#a4cf14b3e4d45a42254ed8d42c1d7685c',·1,·'gmx']]],178 ····['readuserpmfandtargetdistribution_104',·['readUserPmfAndTargetDistribution',·['../namespacegmx.xhtml#a4cf14b3e4d45a42254ed8d42c1d7685c',·1,·'gmx']]],
179 ····['readvmdforces_105',·['readVmdForces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a8727e2dcdf140c43313d7bc1d35a24df',·1,·'gmx::ImdSession::Impl']]],179 ····['readvmdforces_105',·['readVmdForces',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#a8727e2dcdf140c43313d7bc1d35a24df',·1,·'gmx::ImdSession::Impl']]],
180 ····['readwriteflags_106',·['readWriteFlags',·['../classgmx_1_1FileNameOption.xhtml#ae5dac2a5fb815fb82f3671a4276ff127',·1,·'gmx::FileNameOption']]],180 ····['readwriteflags_106',·['readWriteFlags',·['../classgmx_1_1FileNameOption.xhtml#ae5dac2a5fb815fb82f3671a4276ff127',·1,·'gmx::FileNameOption']]],
181 ····['readxvgdatainternal_107',·['readXvgDataInternal',·['../namespaceanonymous__namespace_02xvgr_8cpp_03.xhtml#a7eaa192880e876ce77c90f5d9621ed49',·1,·'anonymous_namespace{xvgr.cpp}']]],181 ····['readxvgdatainternal_107',·['readXvgDataInternal',·['../namespaceanonymous__namespace_02xvgr_8cpp_03.xhtml#a7eaa192880e876ce77c90f5d9621ed49',·1,·'anonymous_namespace{xvgr.cpp}']]],
Offset 222, 47 lines modifiedOffset 222, 47 lines modified
222 ····['recorded_139',·['Recorded',·['../namespacegmx.xhtml#a936952a1a6d4f2d24c06259e1b03647ba5b6352d4af330defb41d0bba3929b885',·1,·'gmx']]],222 ····['recorded_139',·['Recorded',·['../namespacegmx.xhtml#a936952a1a6d4f2d24c06259e1b03647ba5b6352d4af330defb41d0bba3929b885',·1,·'gmx']]],
223 ····['recording_140',·['Recording',·['../namespacegmx.xhtml#a936952a1a6d4f2d24c06259e1b03647bac5564d2e8b8e0ae08bf4363f2b947166',·1,·'gmx']]],223 ····['recording_140',·['Recording',·['../namespacegmx.xhtml#a936952a1a6d4f2d24c06259e1b03647bac5564d2e8b8e0ae08bf4363f2b947166',·1,·'gmx']]],
224 ····['recordtostring_141',·['recordToString',·['../namespacegmx.xhtml#a0958e8470ac61787d0329f347479255b',·1,·'gmx']]],224 ····['recordtostring_141',·['recordToString',·['../namespacegmx.xhtml#a0958e8470ac61787d0329f347479255b',·1,·'gmx']]],
225 ····['recvffrompme_142',·['recvFFromPme',·['../pme__pp_8cpp.xhtml#a049575e0b3d700a685b6cd141b140990',·1,·'pme_pp.cpp']]],225 ····['recvffrompme_142',·['recvFFromPme',·['../pme__pp_8cpp.xhtml#a049575e0b3d700a685b6cd141b140990',·1,·'pme_pp.cpp']]],
226 ····['redirector_5f_143',·['redirector_',·['../classgmx_1_1FileNameOptionManager_1_1Impl.xhtml#afc06e7b47940374cf61927782ad79efc',·1,·'gmx::FileNameOptionManager::Impl']]],226 ····['redirector_5f_143',·['redirector_',·['../classgmx_1_1FileNameOptionManager_1_1Impl.xhtml#afc06e7b47940374cf61927782ad79efc',·1,·'gmx::FileNameOptionManager::Impl']]],
227 ····['redirectstringtostdin_144',·['redirectStringToStdin',·['../classgmx_1_1test_1_1StdioTestHelper.xhtml#a584c8b801f18cd4fdc924d54d7b347fb',·1,·'gmx::test::StdioTestHelper']]],227 ····['redirectstringtostdin_144',·['redirectStringToStdin',·['../classgmx_1_1test_1_1StdioTestHelper.xhtml#a584c8b801f18cd4fdc924d54d7b347fb',·1,·'gmx::test::StdioTestHelper']]],
228 ····['redistribute_2eh_145',·['redistribute.h',·['../redistribute_8h.xhtml',·1,·'']]],228 ····['redistribute_2eh_145',·['redistribute.h',·['../redistribute_8h.xhtml',·1,·'']]],
229 ····['reduce_146',·['reduce',·['../group__module__simd.xhtml#ga55d2bf9090a7a9aed6e4b1f6391ef844',·1,·'gmx::reduce(SimdFloat·a)'],229 ····['reduce_146',·['reduce',·['../group__module__simd.xhtml#ga5ee526de5755cc7bb8d7c46c532483e4',·1,·'gmx::reduce(Simd4Double·a)'],
230 ········['../namespacegmx.xhtml#aa4a37558328ab029203170ad4c6c4d01',·1,·'gmx::reduce(float·a)'], 
231 ········['../namespacegmx.xhtml#a157983d90620412d404e8a77d1ddbd0f',·1,·'gmx::reduce(double·a)'], 
232 ········['../group__module__simd.xhtml#ga62d67c8b5c817dab3ee4acdd5779c14b',·1,·'gmx::reduce(SimdDouble·a)'], 
233 ········['../group__module__simd.xhtml#ga072c4a40acda5dbbd28687df84331335',·1,·'gmx::reduce(Simd4Float·a)'],230 ········['../group__module__simd.xhtml#ga072c4a40acda5dbbd28687df84331335',·1,·'gmx::reduce(Simd4Float·a)'],
234 ········['../group__module__simd.xhtml#ga5ee526de5755cc7bb8d7c46c532483e4',·1,·'gmx::reduce(Simd4Double·a)'],231 ········['../group__module__simd.xhtml#ga62d67c8b5c817dab3ee4acdd5779c14b',·1,·'gmx::reduce(SimdDouble·a)'],
 232 ········['../group__module__simd.xhtml#ga55d2bf9090a7a9aed6e4b1f6391ef844',·1,·'gmx::reduce(SimdFloat·a)'],
 233 ········['../classgmx_1_1ThreadedForceBuffer.xhtml#a7774c66a2b407ff1cce0e6bea9ec5ca3',·1,·'gmx::ThreadedForceBuffer::reduce(gmx::ForceWithShiftForces·*forceWithShiftForces,·real·*ener,·gmx_grppairener_t·*grpp,·gmx::ArrayRef&lt;·real·&gt;·dvdl,·const·gmx::StepWorkload·&amp;stepWork,·int·reductionBeginIndex)'],
235 ········['../classgmx_1_1ThreadedForceBuffer.xhtml#a55aa2bcd64727def69370209a8e4d1bc',·1,·'gmx::ThreadedForceBuffer::reduce(gmx::ForceWithVirial·*forceWithVirial,·real·*ener,·gmx_grppairener_t·*grpp,·gmx::ArrayRef&lt;·real·&gt;·dvdl,·const·gmx::StepWorkload·&amp;stepWork,·int·reductionBeginIndex)'],234 ········['../classgmx_1_1ThreadedForceBuffer.xhtml#a55aa2bcd64727def69370209a8e4d1bc',·1,·'gmx::ThreadedForceBuffer::reduce(gmx::ForceWithVirial·*forceWithVirial,·real·*ener,·gmx_grppairener_t·*grpp,·gmx::ArrayRef&lt;·real·&gt;·dvdl,·const·gmx::StepWorkload·&amp;stepWork,·int·reductionBeginIndex)'],
236 ········['../classgmx_1_1ThreadedForceBuffer.xhtml#a7774c66a2b407ff1cce0e6bea9ec5ca3',·1,·'gmx::ThreadedForceBuffer::reduce(gmx::ForceWithShiftForces·*forceWithShiftForces,·real·*ener,·gmx_grppairener_t·*grpp,·gmx::ArrayRef&lt;·real·&gt;·dvdl,·const·gmx::StepWorkload·&[·...·truncated·by·diffoscope;·len:·40,·SHA:·b38a4cf20de38e74aeeaa42840c1090fa928eedc0936bc56cbbb89d641c8f2c5·...·]235 ········['../namespacegmx.xhtml#aa4a37558328ab029203170ad4c6c4d01',·1,·'gmx::reduce(float·a)'],
 236 ········['../namespacegmx.xhtml#a157983d90620412d404e8a77d1ddbd0f',·1,·'gmx::reduce(double·a)']
237 ····]],237 ····]],
238 ····['reduce_5fenergies_5fover_5flists_147',·['reduce_energies_over_lists',·['../namespacegmx.xhtml#a9a6140c185acf41158fecb86654d099e',·1,·'gmx']]],238 ····['reduce_5fenergies_5fover_5flists_147',·['reduce_energies_over_lists',·['../namespacegmx.xhtml#a9a6140c185acf41158fecb86654d099e',·1,·'gmx']]],
239 ····['reduceatomforces_148',·['reduceAtomForces',·['../pme__gather__sycl_8cpp.xhtml#a80583d62a57d33aa6273af17077c6824',·1,·'pme_gather_sycl.cpp']]],239 ····['reduceatomforces_148',·['reduceAtomForces',·['../pme__gather__sycl_8cpp.xhtml#a80583d62a57d33aa6273af17077c6824',·1,·'pme_gather_sycl.cpp']]],
240 ····['reduceenergiesanddvdl_149',·['reduceEnergiesAndDvdl',·['../classgmx_1_1ThreadedForceBuffer.xhtml#a1cea1fc1587955e216487f105ff730b5',·1,·'gmx::ThreadedForceBuffer']]],240 ····['reduceenergiesanddvdl_149',·['reduceEnergiesAndDvdl',·['../classgmx_1_1ThreadedForceBuffer.xhtml#a1cea1fc1587955e216487f105ff730b5',·1,·'gmx::ThreadedForceBuffer']]],
241 ····['reduceenergywarpshuffle_150',·['reduceEnergyWarpShuffle',·['../namespacegmx.xhtml#a3da842b9a19f6597f9362c5ce45cb234',·1,·'gmx']]],241 ····['reduceenergywarpshuffle_150',·['reduceEnergyWarpShuffle',·['../namespacegmx.xhtml#a3da842b9a19f6597f9362c5ce45cb234',·1,·'gmx']]],
242 ····['reduceforcei_151',·['reduceForceI',·['../namespacegmx.xhtml#a5aa31b7d8b3fbf5596365f7c52d9f75a',·1,·'gmx']]],242 ····['reduceforcei_151',·['reduceForceI',·['../namespacegmx.xhtml#a5aa31b7d8b3fbf5596365f7c52d9f75a',·1,·'gmx']]],
243 ····['reduceforceiandfshift_152',·['reduceForceIAndFShift',·['../namespacegmx.xhtml#a43a4233e627ec67a4f7082a15294ca27',·1,·'gmx']]],243 ····['reduceforceiandfshift_152',·['reduceForceIAndFShift',·['../namespacegmx.xhtml#a43a4233e627ec67a4f7082a15294ca27',·1,·'gmx']]],
244 ····['reduceforceiandfshiftgeneric_153',·['reduceForceIAndFShiftGeneric',·['../namespacegmx.xhtml#a5f7ff281f1f88cb014ba42e0200e6aa0',·1,·'gmx']]],244 ····['reduceforceiandfshiftgeneric_153',·['reduceForceIAndFShiftGeneric',·['../namespacegmx.xhtml#a5f7ff281f1f88cb014ba42e0200e6aa0',·1,·'gmx']]],
245 ····['reduceforceiandfshiftshuffles_154',·['reduceforceiandfshiftshuffles',·['../namespacegmx.xhtml#a84a0ae80b5a2eb8ce9b33980e39fac7c',·1,·'gmx::reduceForceIAndFShiftShuffles(const·FCiBufferWrapperX·&amp;fCiBufX,·const·FCiBufferWrapperY·&amp;fCiBufY,·const·FCiBufferWrapperZ·&amp;fCiBufZ,·const·bool·calcFShift,·const·sycl::nd_item&lt;·3·&gt;·itemIdx,·const·int·tidxi,·const·int·tidxj,·const·int·sci,·const·int·shift,·sycl::global_ptr&lt;·Float3·&gt;·a_f,·sycl::global_ptr&lt;·Float3·&gt;·a_fShift)'],245 ····['reduceforceiandfshiftshuffles_154',·['reduceforceiandfshiftshuffles',·['../namespacegmx.xhtml#ae004a6bfac4b3016d2d63efdcd369ada',·1,·'gmx::reduceForceIAndFShiftShuffles(const·FCiBufferWrapperX·&amp;fCiBufX,·const·FCiBufferWrapperY·&amp;fCiBufY,·const·FCiBufferWrapperZ·&amp;fCiBufZ,·const·bool·calcFShift,·const·sycl::nd_item&lt;·3·&gt;·itemIdx,·const·int·tidxi,·const·int·tidxj,·const·int·sci,·const·int·shift,·sycl::global_ptr&lt;·Float3·&gt;·a_f,·sycl::global_ptr&lt;·Float3·&gt;·a_fShift)'],
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Offset 58, 40 lines modifiedOffset 58, 40 lines modified
58 ····['sandrtty_39',·['sandrTty',·['../group__module__onlinehelp.xhtml#gae3530d298597983b6376c48e09c63816',·1,·'gmx::anonymous_namespace{helpwritercontext.cpp}']]],58 ····['sandrtty_39',·['sandrTty',·['../group__module__onlinehelp.xhtml#gae3530d298597983b6376c48e09c63816',·1,·'gmx::anonymous_namespace{helpwritercontext.cpp}']]],
59 ····['sanegridsize_40',·['saneGridSize',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmebsplinetest_8cpp_03.xhtml#ac12a9dbfe8934c0c457c4af83bde4b03',·1,·'gmx::test::anonymous_namespace{pmebsplinetest.cpp}']]],59 ····['sanegridsize_40',·['saneGridSize',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmebsplinetest_8cpp_03.xhtml#ac12a9dbfe8934c0c457c4af83bde4b03',·1,·'gmx::test::anonymous_namespace{pmebsplinetest.cpp}']]],
60 ····['sanepmeorder_41',·['sanePmeOrder',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmebsplinetest_8cpp_03.xhtml#a047f81edad8ec7a240a3152c46618198',·1,·'gmx::test::anonymous_namespace{pmebsplinetest.cpp}']]],60 ····['sanepmeorder_41',·['sanePmeOrder',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmebsplinetest_8cpp_03.xhtml#a047f81edad8ec7a240a3152c46618198',·1,·'gmx::test::anonymous_namespace{pmebsplinetest.cpp}']]],
61 ····['sansdebye_42',·['sansdebye',·['../classgmx_1_1SansDebye.xhtml#a0bb2e9276239b93f79d72cdf773e8fa0',·1,·'gmx::SansDebye::SansDebye()'],61 ····['sansdebye_42',·['sansdebye',·['../classgmx_1_1SansDebye.xhtml#a0bb2e9276239b93f79d72cdf773e8fa0',·1,·'gmx::SansDebye::SansDebye()'],
62 ········['../classgmx_1_1SansDebye.xhtml',·1,·'gmx::SansDebye']62 ········['../classgmx_1_1SansDebye.xhtml',·1,·'gmx::SansDebye']
63 ····]],63 ····]],
64 ····['sasa_43',·['Sasa',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1Sasa.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}']]],64 ····['sasa_43',·['Sasa',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1Sasa.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}']]],
65 ····['sasa_2ecpp_44',·['sasa.cpp',·['../modules_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)'],65 ····['sasa_2ecpp_44',·['sasa.cpp',·['../tests_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)'],
66 ········['../tests_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)']66 ········['../modules_2sasa_8cpp.xhtml',·1,·'(Global·Namespace)']
67 ····]],67 ····]],
68 ····['sasa_2eh_45',·['sasa.h',·['../sasa_8h.xhtml',·1,·'']]],68 ····['sasa_2eh_45',·['sasa.h',·['../sasa_8h.xhtml',·1,·'']]],
69 ····['sasamoduledata_46',·['sasamoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1SasaModuleData.xhtml#a2edf401c89ecb50a5154e2b5e1c8a1f9',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData::SasaModuleData()'],69 ····['sasamoduledata_46',·['sasamoduledata',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1SasaModuleData.xhtml#a2edf401c89ecb50a5154e2b5e1c8a1f9',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData::SasaModuleData()'],
70 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1SasaModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData']70 ········['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1SasaModuleData.xhtml',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData']
71 ····]],71 ····]],
72 ····['sasamoduletest_47',·['SasaModuleTest',·['../namespacegmx_1_1test_1_1anonymous__namespace_02sasa_8cpp_03.xhtml#a6ab13a9087286dbfd65219d20022e6e1',·1,·'gmx::test::anonymous_namespace{sasa.cpp}']]],72 ····['sasamoduletest_47',·['SasaModuleTest',·['../namespacegmx_1_1test_1_1anonymous__namespace_02sasa_8cpp_03.xhtml#a6ab13a9087286dbfd65219d20022e6e1',·1,·'gmx::test::anonymous_namespace{sasa.cpp}']]],
73 ····['save_5fcalloc_48',·['save_calloc',·['../smalloc_8h.xhtml#af6d73f5ac19d401287ec06c2bbe8b73b',·1,·'smalloc.cpp']]],73 ····['save_5fcalloc_48',·['save_calloc',·['../smalloc_8h.xhtml#af6d73f5ac19d401287ec06c2bbe8b73b',·1,·'smalloc.cpp']]],
74 ····['save_5fcalloc_5faligned_49',·['save_calloc_aligned',·['../smalloc_8h.xhtml#a8d03915277e0b152e4d383811d8872e1',·1,·'smalloc.cpp']]],74 ····['save_5fcalloc_5faligned_49',·['save_calloc_aligned',·['../smalloc_8h.xhtml#a8d03915277e0b152e4d383811d8872e1',·1,·'smalloc.cpp']]],
75 ····['save_5ffree_50',·['save_free',·['../smalloc_8h.xhtml#a1a8ebd96b293ca1f67b3dd41ff1eb43a',·1,·'smalloc.h']]],75 ····['save_5ffree_50',·['save_free',·['../smalloc_8h.xhtml#a1a8ebd96b293ca1f67b3dd41ff1eb43a',·1,·'smalloc.h']]],
76 ····['save_5ffree_5faligned_51',·['save_free_aligned',·['../smalloc_8h.xhtml#ae35d52a2d595ae960055674b4a0d566a',·1,·'smalloc.h']]],76 ····['save_5ffree_5faligned_51',·['save_free_aligned',·['../smalloc_8h.xhtml#ae35d52a2d595ae960055674b4a0d566a',·1,·'smalloc.h']]],
77 ····['save_5fmalloc_52',·['save_malloc',·['../smalloc_8h.xhtml#a4aa36d45cbe79ee551ea9d2e032be5c7',·1,·'smalloc.cpp']]],77 ····['save_5fmalloc_52',·['save_malloc',·['../smalloc_8h.xhtml#a4aa36d45cbe79ee551ea9d2e032be5c7',·1,·'smalloc.cpp']]],
78 ····['save_5fmalloc_5faligned_53',·['save_malloc_aligned',·['../smalloc_8h.xhtml#ac9f21a1f7ef12e856e74372d8cb9d233',·1,·'smalloc.cpp']]],78 ····['save_5fmalloc_5faligned_53',·['save_malloc_aligned',·['../smalloc_8h.xhtml#ac9f21a1f7ef12e856e74372d8cb9d233',·1,·'smalloc.cpp']]],
79 ····['save_5frealloc_54',·['save_realloc',·['../smalloc_8h.xhtml#af31ca8a44667bdd81e548e75a7b0a31d',·1,·'smalloc.cpp']]],79 ····['save_5frealloc_54',·['save_realloc',·['../smalloc_8h.xhtml#af31ca8a44667bdd81e548e75a7b0a31d',·1,·'smalloc.cpp']]],
 80 ····['savecheckpointstate_55',·['savecheckpointstate',·['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#aa845e4a2a85e58b53f868a3bfe74311a',·1,·'gmx::FreeEnergyPerturbationData::Element::saveCheckpointState()'],
80 ····['savecheckpointstate_55',·['savecheckpointstate',·['../classgmx_1_1MttkData.xhtml#acf983f5ad30b4b8792883b4a69799566',·1,·'gmx::MttkData::saveCheckpointState()'], 
81 ········['../classgmx_1_1NoseHooverChainsData.xhtml#af201f4dac2c01518d6a465a1e395d693',·1,·'gmx::NoseHooverChainsData::saveCheckpointState()'], 
82 ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#a0613305c51cd85f761021905a7cc6000',·1,·'gmx::VelocityScalingTemperatureCoupling::saveCheckpointState()'], 
83 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#aed73d86e0139c581fb13f5a64c3ac591',·1,·'gmx::StatePropagatorData::Element::saveCheckpointState()'], 
84 ········['../classgmx_1_1PullElement.xhtml#acb46bbfd7f683624c4e04585d7151fae',·1,·'gmx::PullElement::saveCheckpointState()'], 
85 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a6c4ff548b028800659e1e5b01b050cf3',·1,·'gmx::ParrinelloRahmanBarostat::saveCheckpointState()'], 
86 ········['../classgmx_1_1EnergyData_1_1Element.xhtml#a955025d3dc2badd068819b0366263f21',·1,·'gmx::EnergyData::Element::saveCheckpointState()'],81 ········['../classgmx_1_1EnergyData_1_1Element.xhtml#a955025d3dc2badd068819b0366263f21',·1,·'gmx::EnergyData::Element::saveCheckpointState()'],
87 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#aa81f8ca220fe300d1c4ea3aa561c7d4d',·1,·'gmx::ExpandedEnsembleElement::saveCheckpointState()'],82 ········['../classgmx_1_1ExpandedEnsembleElement.xhtml#aa81f8ca220fe300d1c4ea3aa561c7d4d',·1,·'gmx::ExpandedEnsembleElement::saveCheckpointState()'],
88 ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#a7215fd9b674948475b7a7394a34cf3e9',·1,·'gmx::FirstOrderPressureCoupling::saveCheckpointState()'],83 ········['../classgmx_1_1FirstOrderPressureCoupling.xhtml#a7215fd9b674948475b7a7394a34cf3e9',·1,·'gmx::FirstOrderPressureCoupling::saveCheckpointState()'],
89 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#aa845e4a2a85e58b53f868a3bfe74311a',·1,·'gmx::FreeEnergyPerturbationData::Element::saveCheckpointState()'],84 ········['../classgmx_1_1VelocityScalingTemperatureCoupling.xhtml#a0613305c51cd85f761021905a7cc6000',·1,·'gmx::VelocityScalingTemperatureCoupling::saveCheckpointState()'],
 85 ········['../classgmx_1_1StatePropagatorData_1_1Element.xhtml#aed73d86e0139c581fb13f5a64c3ac591',·1,·'gmx::StatePropagatorData::Element::saveCheckpointState()'],
 86 ········['../classgmx_1_1PullElement.xhtml#acb46bbfd7f683624c4e04585d7151fae',·1,·'gmx::PullElement::saveCheckpointState()'],
90 ········['../group__module__modularsimulator.xhtml#gaa70e5868cd4b8559099c8b687810f8df',·1,·'gmx::ICheckpointHelperClient::saveCheckpointState()']87 ········['../group__module__modularsimulator.xhtml#gaa70e5868cd4b8559099c8b687810f8df',·1,·'gmx::ICheckpointHelperClient::saveCheckpointState()'],
 88 ········['../classgmx_1_1MttkData.xhtml#acf983f5ad30b4b8792883b4a69799566',·1,·'gmx::MttkData::saveCheckpointState()'],
 89 ········['../classgmx_1_1NoseHooverChainsData.xhtml#af201f4dac2c01518d6a465a1e395d693',·1,·'gmx::NoseHooverChainsData::saveCheckpointState()'],
 90 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a6c4ff548b028800659e1e5b01b050cf3',·1,·'gmx::ParrinelloRahmanBarostat::saveCheckpointState()']
91 ····]],91 ····]],
92 ····['saveedsampointer_56',·['saveEdsamPointer',·['../classgmx_1_1Constraints.xhtml#aa20d0b058932c4e3ff6725444de6499f',·1,·'gmx::Constraints']]],92 ····['saveedsampointer_56',·['saveEdsamPointer',·['../classgmx_1_1Constraints.xhtml#aa20d0b058932c4e3ff6725444de6499f',·1,·'gmx::Constraints']]],
93 ····['saxsdebye_57',·['saxsdebye',·['../classgmx_1_1SaxsDebye.xhtml#a678e01fbb38f9e7d22bb5bd2efa414b6',·1,·'gmx::SaxsDebye::SaxsDebye()'],93 ····['saxsdebye_57',·['saxsdebye',·['../classgmx_1_1SaxsDebye.xhtml#a678e01fbb38f9e7d22bb5bd2efa414b6',·1,·'gmx::SaxsDebye::SaxsDebye()'],
94 ········['../classgmx_1_1SaxsDebye.xhtml',·1,·'gmx::SaxsDebye']94 ········['../classgmx_1_1SaxsDebye.xhtml',·1,·'gmx::SaxsDebye']
95 ····]],95 ····]],
96 ····['sbase_58',·['sbase',·['../structgmx__ana__poscalc__t.xhtml#a72b00bc053d3b7b79e594b1b6e5fa733',·1,·'gmx_ana_poscalc_t']]],96 ····['sbase_58',·['sbase',·['../structgmx__ana__poscalc__t.xhtml#a72b00bc053d3b7b79e594b1b6e5fa733',·1,·'gmx_ana_poscalc_t']]],
97 ····['sblock_59',·['sblock',·['../structgmx_1_1shakedata.xhtml#a119cbdb92204daa557f75d7a14bbeb8c',·1,·'gmx::shakedata']]],97 ····['sblock_59',·['sblock',·['../structgmx_1_1shakedata.xhtml#a119cbdb92204daa557f75d7a14bbeb8c',·1,·'gmx::shakedata']]],
Offset 120, 71 lines modifiedOffset 120, 71 lines modified
120 ····['sc_5fgpunumclusterpercellx_82',·['sc_gpuNumClusterPerCellX',·['../namespacegmx.xhtml#ab7199026076a9a98316402a6a771a4b6',·1,·'gmx']]],120 ····['sc_5fgpunumclusterpercellx_82',·['sc_gpuNumClusterPerCellX',·['../namespacegmx.xhtml#ab7199026076a9a98316402a6a771a4b6',·1,·'gmx']]],
121 ····['sc_5fgpunumclusterpercelly_83',·['sc_gpuNumClusterPerCellY',·['../namespacegmx.xhtml#a6ee970be4850758013a1f72fa03cb8c4',·1,·'gmx']]],121 ····['sc_5fgpunumclusterpercelly_83',·['sc_gpuNumClusterPerCellY',·['../namespacegmx.xhtml#a6ee970be4850758013a1f72fa03cb8c4',·1,·'gmx']]],
122 ····['sc_5fgpunumclusterpercellz_84',·['sc_gpuNumClusterPerCellZ',·['../namespacegmx.xhtml#ae206fb5ebac7082694cf15a78c8b7053',·1,·'gmx']]],122 ····['sc_5fgpunumclusterpercellz_84',·['sc_gpuNumClusterPerCellZ',·['../namespacegmx.xhtml#ae206fb5ebac7082694cf15a78c8b7053',·1,·'gmx']]],
123 ····['sc_5fgpuparallelexecutionwidth_85',·['sc_gpuParallelExecutionWidth',·['../namespacegmx.xhtml#a9ecec7ee7847a6e0bf65447241ebd6c0',·1,·'gmx']]],123 ····['sc_5fgpuparallelexecutionwidth_85',·['sc_gpuParallelExecutionWidth',·['../namespacegmx.xhtml#a9ecec7ee7847a6e0bf65447241ebd6c0',·1,·'gmx']]],
124 ····['sc_5fgpusplitjclustersize_86',·['sc_gpuSplitJClusterSize',·['../namespacegmx.xhtml#adf9e2c70b2c60d94f56fec5823285ef3',·1,·'gmx']]],124 ····['sc_5fgpusplitjclustersize_86',·['sc_gpuSplitJClusterSize',·['../namespacegmx.xhtml#adf9e2c70b2c60d94f56fec5823285ef3',·1,·'gmx']]],
125 ····['sc_5fhavenbnxmsimd2xmmkernels_87',·['sc_haveNbnxmSimd2xmmKernels',·['../nbnxm__simd_8h.xhtml#ac11fe49ef54d157502af1453777bb647',·1,·'nbnxm_simd.h']]],125 ····['sc_5fhavenbnxmsimd2xmmkernels_87',·['sc_haveNbnxmSimd2xmmKernels',·['../nbnxm__simd_8h.xhtml#ac11fe49ef54d157502af1453777bb647',·1,·'nbnxm_simd.h']]],
126 ····['sc_5fhavenbnxmsimd4xmkernels_88',·['sc_haveNbnxmSimd4xmKernels',·['../nbnxm__simd_8h.xhtml#a81d865f76ee91e7ded396efbbc90ac4f',·1,·'nbnxm_simd.h']]],126 ····['sc_5fhavenbnxmsimd4xmkernels_88',·['sc_haveNbnxmSimd4xmKernels',·['../nbnxm__simd_8h.xhtml#a81d865f76ee91e7ded396efbbc90ac4f',·1,·'nbnxm_simd.h']]],
 127 ····['sc_5ficlustersize_89',·['sc_iclustersize',·['../namespacegmx.xhtml#ad5df7dcd80bf26c8f31fb76780234400',·1,·'gmx::sc_iClusterSize()'],
127 ····['sc_5ficlustersize_89',·['sc_iclustersize',·['../nbnxm__simd_8h.xhtml#aa414705a24a611a6ebd70074354224fa',·1,·'sc_iClusterSize():&#160;nbnxm_simd.h'],128 ········['../nbnxm__simd_8h.xhtml#aa414705a24a611a6ebd70074354224fa',·1,·'sc_iClusterSize():&#160;nbnxm_simd.h']
128 ········['../namespacegmx.xhtml#ad5df7dcd80bf26c8f31fb76780234400',·1,·'gmx::sc_iClusterSize(const·NbnxmKernelType·kernelType)'] 
129 ····]],129 ····]],
130 ····['sc_5fisgpupairlisttype_90',·['sc_isGpuPairListType',·['../namespacegmx.xhtml#a537d842a3c66578a076f668694f11319',·1,·'gmx']]],130 ····['sc_5fisgpupairlisttype_90',·['sc_isGpuPairListType',·['../namespacegmx.xhtml#a537d842a3c66578a076f668694f11319',·1,·'gmx']]],
131 ····['sc_5fjclustersize_91',·['sc_jClusterSize',·['../namespacegmx.xhtml#a858c5384b6739a1bd6989e44f942b5fc',·1,·'gmx']]],131 ····['sc_5fjclustersize_91',·['sc_jClusterSize',·['../namespacegmx.xhtml#a858c5384b6739a1bd6989e44f942b5fc',·1,·'gmx']]],
132 ····['sc_5flayouttype_92',·['sc_layoutType',·['../namespacegmx.xhtml#af1c005d1c11ecc155592ef473cc832ee',·1,·'gmx']]],132 ····['sc_5flayouttype_92',·['sc_layoutType',·['../namespacegmx.xhtml#af1c005d1c11ecc155592ef473cc832ee',·1,·'gmx']]],
133 ····['sc_5fmaxdonorsperresidue_93',·['sc_maxDonorsPerResidue',·['../structgmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03_1_1ResInfo.xhtml#a295e4dc2a8943f881df3febe63b6572f',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}::ResInfo']]],133 ····['sc_5fmaxdonorsperresidue_93',·['sc_maxDonorsPerResidue',·['../structgmx_1_1analysismodules_1_1anonymous__namespace_02dssp_8cpp_03_1_1ResInfo.xhtml#a295e4dc2a8943f881df3febe63b6572f',·1,·'gmx::analysismodules::anonymous_namespace{dssp.cpp}::ResInfo']]],
134 ····['sc_5fmaxnumizones_94',·['sc_maxNumIZones',·['../namespacegmx.xhtml#ad29c98a8ee43ed2ed812f11630f96a62',·1,·'gmx']]],134 ····['sc_5fmaxnumizones_94',·['sc_maxNumIZones',·['../namespacegmx.xhtml#ad29c98a8ee43ed2ed812f11630f96a62',·1,·'gmx']]],
135 ····['sc_5fmaxnumzones_95',·['sc_maxNumZones',·['../namespacegmx.xhtml#a5e13c275f97165673749dc10651d0403',·1,·'gmx']]],135 ····['sc_5fmaxnumzones_95',·['sc_maxNumZones',·['../namespacegmx.xhtml#a5e13c275f97165673749dc10651d0403',·1,·'gmx']]],
136 ····['sc_5fncolvarsatomsname_5f_96',·['sc_nColvarsAtomsName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#ac0a5afaf0b4b6ab472ce670fb17acd1e',·1,·'gmx::ColvarsForceProviderState']]],136 ····['sc_5fncolvarsatomsname_5f_96',·['sc_nColvarsAtomsName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#ac0a5afaf0b4b6ab472ce670fb17acd1e',·1,·'gmx::ColvarsForceProviderState']]],
 137 ····['sc_5fnumenergygroups_97',·['sc_numenergygroups',·['../structgmx_1_1test_1_1TestSystem.xhtml#a6a0f14e33f368f96c0f3c4128e3c3f2c',·1,·'gmx::test::TestSystem::sc_numEnergyGroups'],
137 ····['sc_5fnumenergygroups_97',·['sc_numenergygroups',·['../namespacegmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03.xhtml#ad47ab0f836918e5019cfc367f1efbda3',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::sc_numEnergyGroups'],138 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02kernel__test_8cpp_03.xhtml#ad47ab0f836918e5019cfc367f1efbda3',·1,·'gmx::test::anonymous_namespace{kernel_test.cpp}::sc_numEnergyGroups']
138 ········['../structgmx_1_1test_1_1TestSystem.xhtml#a6a0f14e33f368f96c0f3c4128e3c3f2c',·1,·'gmx::test::TestSystem::sc_numEnergyGroups'] 
139 ····]],139 ····]],
140 ····['sc_5fnumfepstates_98',·['sc_numFepStates',·['../pme__gpu__staging_8h.xhtml#a1b46330c0160a5539685afd05ae865c3',·1,·'pme_gpu_staging.h']]],140 ····['sc_5fnumfepstates_98',·['sc_numFepStates',·['../pme__gpu__staging_8h.xhtml#a1b46330c0160a5539685afd05ae865c3',·1,·'pme_gpu_staging.h']]],
141 ····['sc_5fnumgridsljlb_99',·['sc_numGridsLJLB',·['../pme__internal_8h.xhtml#afae6cc23490d753bc9f480193607a2bd',·1,·'pme_internal.h']]],141 ····['sc_5fnumgridsljlb_99',·['sc_numGridsLJLB',·['../pme__internal_8h.xhtml#afae6cc23490d753bc9f480193607a2bd',·1,·'pme_internal.h']]],
142 ····['sc_5fpressurematrixtypenames_100',·['sc_pressureMatrixTypeNames',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#ad8d195071fbeafd96f845f9bd83ddf5f',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],142 ····['sc_5fpressurematrixtypenames_100',·['sc_pressureMatrixTypeNames',·['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#ad8d195071fbeafd96f845f9bd83ddf5f',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}']]],
143 ····['sc_5frefdatafilenamemaker_101',·['sc_refDataFilenameMaker',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmetest_8cpp_03.xhtml#a612cdac13c1c842588ae6f765b4c8158',·1,·'gmx::test::anonymous_namespace{pmetest.cpp}']]],143 ····['sc_5frefdatafilenamemaker_101',·['sc_refDataFilenameMaker',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmetest_8cpp_03.xhtml#a612cdac13c1c842588ae6f765b4c8158',·1,·'gmx::test::anonymous_namespace{pmetest.cpp}']]],
144 ····['sc_5fskewnessmargin_102',·['sc_skewnessMargin',·['../pbc_8cpp.xhtml#a01ddfce19291b0878ba36bd9285a1e9d',·1,·'pbc.cpp']]],144 ····['sc_5fskewnessmargin_102',·['sc_skewnessMargin',·['../pbc_8cpp.xhtml#a01ddfce19291b0878ba36bd9285a1e9d',·1,·'pbc.cpp']]],
145 ····['sc_5fsubgroupsize_103',·['sc_subGroupSize',·['../pme__gpu__grid__sycl_8cpp.xhtml#a3bb4a447d7735630217c8d9b6a5e1963',·1,·'pme_gpu_grid_sycl.cpp']]],145 ····['sc_5fsubgroupsize_103',·['sc_subGroupSize',·['../pme__gpu__grid__sycl_8cpp.xhtml#a3bb4a447d7735630217c8d9b6a5e1963',·1,·'pme_gpu_grid_sycl.cpp']]],
146 ····['sc_5ftestnamer_104',·['sc_testnamer',·['../namespacegmx_1_1test_1_1anonymous__namespace_02pmetest_8cpp_03.xhtml#a85a4f7592d748dfd59373117e51fc599',·1,·'gmx::test::anonymous_namespace{pmetest.cpp}::sc_testNamer'], 
147 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02fft_8cpp_03.xhtml#ae605e2033e55af3de3a80361023cc5a3',·1,·'gmx::test::anonymous_namespace{fft.cpp}::sc_testNamer'],146 ····['sc_5ftestnamer_104',·['sc_testnamer',·['../namespacegmx_1_1test_1_1anonymous__namespace_02fft_8cpp_03.xhtml#ae605e2033e55af3de3a80361023cc5a3',·1,·'gmx::test::anonymous_namespace{fft.cpp}::sc_testNamer'],
148 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a144cb9000ebc841c25d100cb1b45b6f7',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}::sc_testNamer'],147 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02parrinellorahman_8cpp_03.xhtml#a144cb9000ebc841c25d100cb1b45b6f7',·1,·'gmx::test::anonymous_namespace{parrinellorahman.cpp}::sc_testNamer'],
149 ········['../namespaceanonymous__namespace_02domain__decomposition_8cpp_03.xhtml#ad95f6319037d8f945235ebf0831ccba3',·1,·'anonymous_namespace{domain_decomposition.cpp}::sc_testNamer']148 ········['../namespaceanonymous__namespace_02domain__decomposition_8cpp_03.xhtml#ad95f6319037d8f945235ebf0831ccba3',·1,·'anonymous_namespace{domain_decomposition.cpp}::sc_testNamer'],
 149 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pmetest_8cpp_03.xhtml#a85a4f7592d748dfd59373117e51fc599',·1,·'gmx::test::anonymous_namespace{pmetest.cpp}::sc_testNamer']
150 ····]],150 ····]],
151 ····['sc_5fworkgroupsize_105',·['sc_workGroupSize',·['../namespacegmx.xhtml#ac85e48554e6e1788ea930b7064d371a6',·1,·'gmx']]],151 ····['sc_5fworkgroupsize_105',·['sc_workGroupSize',·['../namespacegmx.xhtml#ac85e48554e6e1788ea930b7064d371a6',·1,·'gmx']]],
152 ····['sc_5fxoldwholename_5f_106',·['sc_xOldWholeName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a4ae85de69074dadd19c5fc012a3cccc8',·1,·'gmx::ColvarsForceProviderState']]],152 ····['sc_5fxoldwholename_5f_106',·['sc_xOldWholeName_',·['../structgmx_1_1ColvarsForceProviderState.xhtml#a4ae85de69074dadd19c5fc012a3cccc8',·1,·'gmx::ColvarsForceProviderState']]],
153 ····['sc_5fxstride_107',·['sc_xStride',·['../namespacegmx.xhtml#a56bd008a3e40cc25b83bc1196e150ea9',·1,·'gmx']]],153 ····['sc_5fxstride_107',·['sc_xStride',·['../namespacegmx.xhtml#a56bd008a3e40cc25b83bc1196e150ea9',·1,·'gmx']]],
154 ····['scalar_2eh_108',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]],154 ····['scalar_2eh_108',·['scalar.h',·['../scalar_8h.xhtml',·1,·'']]],
155 ····['scalar_5fmath_2eh_109',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]],155 ····['scalar_5fmath_2eh_109',·['scalar_math.h',·['../scalar__math_8h.xhtml',·1,·'']]],
156 ····['scalar_5futil_2eh_110',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]],156 ····['scalar_5futil_2eh_110',·['scalar_util.h',·['../scalar__util_8h.xhtml',·1,·'']]],
157 ····['scalardatatypes_111',·['ScalarDataTypes',·['../structScalarDataTypes.xhtml',·1,·'']]],157 ····['scalardatatypes_111',·['ScalarDataTypes',·['../structScalarDataTypes.xhtml',·1,·'']]],
158 ····['scalarforce_112',·['scalarForce',·['../structpull__coord__work__t.xhtml#adde522794352e2ebc796944dcda04204',·1,·'pull_coord_work_t']]],158 ····['scalarforce_112',·['scalarForce',·['../structpull__coord__work__t.xhtml#adde522794352e2ebc796944dcda04204',·1,·'pull_coord_work_t']]],
 159 ····['scale_113',·['scale',·['../structt__forcetable.xhtml#a74042b613c0660e9d1a66b49147d0159',·1,·'t_forcetable::scale'],
159 ····['scale_113',·['scale',·['../structPmeGpuDynamicParams.xhtml#a5c019da79bddcfb0ac07f2a757a269bc',·1,·'PmeGpuDynamicParams::scale'],160 ········['../structPmeGpuDynamicParams.xhtml#a5c019da79bddcfb0ac07f2a757a269bc',·1,·'PmeGpuDynamicParams::scale'],
160 ········['../structt__forcetable.xhtml#a74042b613c0660e9d1a66b49147d0159',·1,·'t_forcetable::scale'], 
161 ········['../classgmx_1_1MttkData.xhtml#aa587cc1c76049dce893923692e23d769',·1,·'gmx::MttkData::scale()']161 ········['../classgmx_1_1MttkData.xhtml#aa587cc1c76049dce893923692e23d769',·1,·'gmx::MttkData::scale()']
162 ····]],162 ····]],
163 ····['scaleall_114',·['scaleAll',·['../classgmx_1_1AbstractAverageHistogram.xhtml#a749915682fa7728ee088dfd6726b1736',·1,·'gmx::AbstractAverageHistogram']]],163 ····['scaleall_114',·['scaleAll',·['../classgmx_1_1AbstractAverageHistogram.xhtml#a749915682fa7728ee088dfd6726b1736',·1,·'gmx::AbstractAverageHistogram']]],
164 ····['scaleallbyvector_115',·['scaleAllByVector',·['../classgmx_1_1AbstractAverageHistogram.xhtml#aabe3becd12550d662e727afbd168f433',·1,·'gmx::AbstractAverageHistogram']]],164 ····['scaleallbyvector_115',·['scaleAllByVector',·['../classgmx_1_1AbstractAverageHistogram.xhtml#aabe3becd12550d662e727afbd168f433',·1,·'gmx::AbstractAverageHistogram']]],
165 ····['scalebox_116',·['scaleBox',·['../classEwaldBoxZScaler.xhtml#a67431757f83b309cf81b3cf96eabe7bf',·1,·'EwaldBoxZScaler']]],165 ····['scalebox_116',·['scaleBox',·['../classEwaldBoxZScaler.xhtml#a67431757f83b309cf81b3cf96eabe7bf',·1,·'EwaldBoxZScaler']]],
166 ····['scalebyvector_117',·['scaleByVector',·['../namespacegmx.xhtml#a0f5022a3da3a90ab52ba2cec11c936d5',·1,·'gmx']]],166 ····['scalebyvector_117',·['scaleByVector',·['../namespacegmx.xhtml#a0f5022a3da3a90ab52ba2cec11c936d5',·1,·'gmx']]],
167 ····['scalecoordinates_118',·['scaleCoordinates',·['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a9376d1cbbecb20c18661950973814d0d',·1,·'gmx::UpdateConstrainGpu::Impl']]],167 ····['scalecoordinates_118',·['scaleCoordinates',·['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a9376d1cbbecb20c18661950973814d0d',·1,·'gmx::UpdateConstrainGpu::Impl']]],
168 ····['scaled_5flagrange_5fmultiplier_119',·['scaled_lagrange_multiplier',·['../structgmx_1_1shakedata.xhtml#adde8f58fcb5ada8d634039c00ca42a58',·1,·'gmx::shakedata']]],168 ····['scaled_5flagrange_5fmultiplier_119',·['scaled_lagrange_multiplier',·['../structgmx_1_1shakedata.xhtml#adde8f58fcb5ada8d634039c00ca42a58',·1,·'gmx::shakedata']]],
169 ····['scaledsampleweight_120',·['ScaledSampleWeight',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a7cffc85b2f1c2177a818913479ea4f18',·1,·'gmx']]],169 ····['scaledsampleweight_120',·['ScaledSampleWeight',·['../namespacegmx.xhtml#aa78c6481d10a93316c155ffdf021e581a7cffc85b2f1c2177a818913479ea4f18',·1,·'gmx']]],
170 ····['scaleinternaltouserinput_121',·['scaleInternalToUserInput',·['../structgmx_1_1DimParams.xhtml#a8b7199033caa1dbea6f4fbc8457c3103',·1,·'gmx::DimParams']]],170 ····['scaleinternaltouserinput_121',·['scaleInternalToUserInput',·['../structgmx_1_1DimParams.xhtml#a8b7199033caa1dbea6f4fbc8457c3103',·1,·'gmx::DimParams']]],
171 ····['scalekernel_122',·['scaleKernel',·['../namespacegmx.xhtml#a3478a6cdaf4905d5f1939a1cc0f7672c',·1,·'gmx']]],171 ····['scalekernel_122',·['scaleKernel',·['../namespacegmx.xhtml#a3478a6cdaf4905d5f1939a1cc0f7672c',·1,·'gmx']]],
172 ····['scaleoperationonly_123',·['scaleOperationOnly',·['../classgmx_1_1TranslateAndScale.xhtml#acc95c4510196adaa2be2e247eaa400a6',·1,·'gmx::TranslateAndScale']]],172 ····['scaleoperationonly_123',·['scaleOperationOnly',·['../classgmx_1_1TranslateAndScale.xhtml#acc95c4510196adaa2be2e247eaa400a6',·1,·'gmx::TranslateAndScale']]],
173 ····['scalepositions_124',·['scalepositions',·['../namespacegmx.xhtml#aa40466eed05791a3c070a9620d0118a5',·1,·'gmx::scalePositions(int·a,·real·lambda,·rvec·*gmx_restrict·x)'], 
174 ········['../group__module__modularsimulator.xhtml#gga93e79323b6317b2185ad6613a20fa290a0ad0cca109a60ba3ddbe1df8f32d19ba',·1,·'gmx::ScalePositions']173 ····['scalepositions_124',·['scalepositions',·['../group__module__modularsimulator.xhtml#gga93e79323b6317b2185ad6613a20fa290a0ad0cca109a60ba3ddbe1df8f32d19ba',·1,·'gmx::ScalePositions'],
 174 ········['../namespacegmx.xhtml#aa40466eed05791a3c070a9620d0118a5',·1,·'gmx::scalePositions(int·a,·real·lambda,·rvec·*gmx_restrict·x)']
175 ····]],175 ····]],
176 ····['scalesingle_125',·['scaleSingle',·['../classgmx_1_1AbstractAverageHistogram.xhtml#abb37138b6fef236b38b46177ab3a7f16',·1,·'gmx::AbstractAverageHistogram']]],176 ····['scalesingle_125',·['scaleSingle',·['../classgmx_1_1AbstractAverageHistogram.xhtml#abb37138b6fef236b38b46177ab3a7f16',·1,·'gmx::AbstractAverageHistogram']]],
177 ····['scaletarget_126',·['scaleTarget',·['../classgmx_1_1PointState.xhtml#a93751c7f51be9d69545a30ce189bffc2',·1,·'gmx::PointState']]],177 ····['scaletarget_126',·['scaleTarget',·['../classgmx_1_1PointState.xhtml#a93751c7f51be9d69545a30ce189bffc2',·1,·'gmx::PointState']]],
178 ····['scaletargetbymetric_127',·['scaleTargetByMetric',·['../classgmx_1_1BiasParams.xhtml#ad9bd18c9c3bb06a0a31ae993dc420eba',·1,·'gmx::BiasParams']]],178 ····['scaletargetbymetric_127',·['scaleTargetByMetric',·['../classgmx_1_1BiasParams.xhtml#ad9bd18c9c3bb06a0a31ae993dc420eba',·1,·'gmx::BiasParams']]],
179 ····['scaleuserinputtointernal_128',·['scaleUserInputToInternal',·['../structgmx_1_1DimParams.xhtml#a004d2c59395c40d1600fcfecde06de49',·1,·'gmx::DimParams']]],179 ····['scaleuserinputtointernal_128',·['scaleUserInputToInternal',·['../structgmx_1_1DimParams.xhtml#a004d2c59395c40d1600fcfecde06de49',·1,·'gmx::DimParams']]],
180 ····['scalevelocities_129',·['scalevelocities',·['../group__module__modularsimulator.xhtml#gga93e79323b6317b2185ad6613a20fa290a2108282211446e168416bdfc55bbbda1',·1,·'gmx::ScaleVelocities'],180 ····['scalevelocities_129',·['scalevelocities',·['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a92ef8227ecb881d5a8f7fd2b3882afe3',·1,·'gmx::UpdateConstrainGpu::Impl::scaleVelocities()'],
 181 ········['../namespacegmx.xhtml#a4e4da4f100aca65e4733c6fe8e881a45',·1,·'gmx::scaleVelocities(int·a,·real·lambda,·rvec·*gmx_restrict·v)'],
181 ········['../group__module__modularsimulator.xhtml#ga5ff057aa36da97961cf549a2d15d0a1d',·1,·'gmx::ScaleVelocities'],182 ········['../group__module__modularsimulator.xhtml#ga5ff057aa36da97961cf549a2d15d0a1d',·1,·'gmx::ScaleVelocities'],
 183 ········['../group__module__modularsimulator.xhtml#gga93e79323b6317b2185ad6613a20fa290a2108282211446e168416bdfc55bbbda1',·1,·'gmx::ScaleVelocities']
182 ········['../classgmx_1_1UpdateConstrainGpu_1_1Impl.xhtml#a92ef8227ecb881d5a8f7fd2b3882afe3',·1,·'gmx::UpdateConstrainGpu::Impl::scaleVelocities()'], 
183 ········['../namespacegmx.xhtml#a4e4da4f100aca65e4733c6fe8e881a45',·1,·'gmx::scaleVelocities(int·a,·real·lambda,·rvec·*gmx_restrict·v)'] 
184 ····]],184 ····]],
185 ····['scalingmatrix_130',·['ScalingMatrix',·['../structgmx_1_1ScalingMatrix.xhtml',·1,·'gmx']]],185 ····['scalingmatrix_130',·['ScalingMatrix',·['../structgmx_1_1ScalingMatrix.xhtml',·1,·'gmx']]],
186 ····['scan_5fedvec_131',·['scan_edvec',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#aa33eff7a8d809b89f9cf9041736b276e',·1,·'anonymous_namespace{edsam.cpp}']]],186 ····['scan_5fedvec_131',·['scan_edvec',·['../namespaceanonymous__namespace_02edsam_8cpp_03.xhtml#aa33eff7a8d809b89f9cf9041736b276e',·1,·'anonymous_namespace{edsam.cpp}']]],
187 ····['scanner_2eh_132',·['scanner.h',·['../scanner_8h.xhtml',·1,·'']]],187 ····['scanner_2eh_132',·['scanner.h',·['../scanner_8h.xhtml',·1,·'']]],
188 ····['scanner_5finternal_2ecpp_133',·['scanner_internal.cpp',·['../scanner__internal_8cpp.xhtml',·1,·'']]],188 ····['scanner_5finternal_2ecpp_133',·['scanner_internal.cpp',·['../scanner__internal_8cpp.xhtml',·1,·'']]],
189 ····['scanner_5finternal_2eh_134',·['scanner_internal.h',·['../scanner__internal_8h.xhtml',·1,·'']]],189 ····['scanner_5finternal_2eh_134',·['scanner_internal.h',·['../scanner__internal_8h.xhtml',·1,·'']]],
190 ····['scantemporary_135',·['scanTemporary',·['../classgmx_1_1GpuPairlistSorting.xhtml#af57aed49734b372a758187b23a0a347c',·1,·'gmx::GpuPairlistSorting']]],190 ····['scantemporary_135',·['scanTemporary',·['../classgmx_1_1GpuPairlistSorting.xhtml#af57aed49734b372a758187b23a0a347c',·1,·'gmx::GpuPairlistSorting']]],
Offset 202, 34 lines modifiedOffset 202, 34 lines modified
202 ····['scatteringfactors_2ecpp_145',·['scatteringfactors.cpp',·['../scatteringfactors_8cpp.xhtml',·1,·'']]],202 ····['scatteringfactors_2ecpp_145',·['scatteringfactors.cpp',·['../scatteringfactors_8cpp.xhtml',·1,·'']]],
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Offset 66, 22 lines modifiedOffset 66, 22 lines modified
66 ····['t_5fumbrellawindow_49',·['t_UmbrellaWindow',·['../structt__UmbrellaWindow.xhtml',·1,·'']]],66 ····['t_5fumbrellawindow_49',·['t_UmbrellaWindow',·['../structt__UmbrellaWindow.xhtml',·1,·'']]],
67 ····['t_5fxpmelmt_50',·['t_xpmelmt',·['../structt__xpmelmt.xhtml',·1,·'']]],67 ····['t_5fxpmelmt_50',·['t_xpmelmt',·['../structt__xpmelmt.xhtml',·1,·'']]],
68 ····['ta_5fdisres_51',·['ta_disres',·['../disre_8h.xhtml#a0f24a3fea145dd8f74fc24a64232e8b9',·1,·'disre.h']]],68 ····['ta_5fdisres_51',·['ta_disres',·['../disre_8h.xhtml#a0f24a3fea145dd8f74fc24a64232e8b9',·1,·'disre.h']]],
69 ····['table_20interpolation_52',·['Classes·for·table·interpolation',·['../group__module__tables.xhtml',·1,·'']]],69 ····['table_20interpolation_52',·['Classes·for·table·interpolation',·['../group__module__tables.xhtml',·1,·'']]],
70 ····['tableinput_2eh_53',·['tableinput.h',·['../tableinput_8h.xhtml',·1,·'']]],70 ····['tableinput_2eh_53',·['tableinput.h',·['../tableinput_8h.xhtml',·1,·'']]],
71 ····['tableinteraction_54',·['TableInteraction',·['../forcetable_8h.xhtml#a5ab83e2e3173b76df0ca2b9ca595040c',·1,·'forcetable.h']]],71 ····['tableinteraction_54',·['TableInteraction',·['../forcetable_8h.xhtml#a5ab83e2e3173b76df0ca2b9ca595040c',·1,·'forcetable.h']]],
72 ····['tablesoffsets_55',·['tablesOffsets',·['../structPmeGpuGridParams.xhtml#a705c9e648f29b1dc77275482d31b5e2e',·1,·'PmeGpuGridParams']]],72 ····['tablesoffsets_55',·['tablesOffsets',·['../structPmeGpuGridParams.xhtml#a705c9e648f29b1dc77275482d31b5e2e',·1,·'PmeGpuGridParams']]],
73 ····['tablespacing_56',·['tablespacing',·['../classgmx_1_1CubicSplineTable.xhtml#a68e69e9f9e7653a0f59b4417d9278055',·1,·'gmx::CubicSplineTable::tableSpacing()'], 
74 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a01c2df243de4371cf4c88ed712073ec4',·1,·'gmx::QuadraticSplineTable::tableSpacing()']73 ····['tablespacing_56',·['tablespacing',·['../classgmx_1_1QuadraticSplineTable.xhtml#a01c2df243de4371cf4c88ed712073ec4',·1,·'gmx::QuadraticSplineTable::tableSpacing()'],
 74 ········['../classgmx_1_1CubicSplineTable.xhtml#a68e69e9f9e7653a0f59b4417d9278055',·1,·'gmx::CubicSplineTable::tableSpacing()']
75 ····]],75 ····]],
76 ····['tabulated_5fbonded_5finteractions_2ecpp_57',·['tabulated_bonded_interactions.cpp',·['../tabulated__bonded__interactions_8cpp.xhtml',·1,·'']]],76 ····['tabulated_5fbonded_5finteractions_2ecpp_57',·['tabulated_bonded_interactions.cpp',·['../tabulated__bonded__interactions_8cpp.xhtml',·1,·'']]],
77 ····['tabulated_5fpot_58',·['tabulated_pot',·['../gmx__wham_8cpp.xhtml#a0274f4fbc68349f4127af1ea77473b89',·1,·'gmx_wham.cpp']]],77 ····['tabulated_5fpot_58',·['tabulated_pot',·['../gmx__wham_8cpp.xhtml#a0274f4fbc68349f4127af1ea77473b89',·1,·'gmx_wham.cpp']]],
78 ····['tabulatednormaldistribution_59',·['tabulatednormaldistribution',·['../classgmx_1_1TabulatedNormalDistribution.xhtml#ad090e6c16ba8f5b3a5408d8c07788dd3',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution()'],78 ····['tabulatednormaldistribution_59',·['tabulatednormaldistribution',·['../classgmx_1_1TabulatedNormalDistribution.xhtml',·1,·'gmx::TabulatedNormalDistribution&lt;·RealType,·tableBits·&gt;'],
79 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml',·1,·'gmx::TabulatedNormalDistribution&lt;·RealType,·tableBits·&gt;'], 
80 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#abb053676a2ca8ed4f5a9908bc70f25a7',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution()']79 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#abb053676a2ca8ed4f5a9908bc70f25a7',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution(result_type·mean=0.0,·result_type·stddev=1.0)'],
 80 ········['../classgmx_1_1TabulatedNormalDistribution.xhtml#ad090e6c16ba8f5b3a5408d8c07788dd3',·1,·'gmx::TabulatedNormalDistribution::TabulatedNormalDistribution(const·param_type·&amp;param)']
81 ····]],81 ····]],
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72 ····['update_5fconstrain_5fgpu_5fimpl_2ecpp_43',·['update_constrain_gpu_impl.cpp',·['../update__constrain__gpu__impl_8cpp.xhtml',·1,·'']]],72 ····['update_5fconstrain_5fgpu_5fimpl_2ecpp_43',·['update_constrain_gpu_impl.cpp',·['../update__constrain__gpu__impl_8cpp.xhtml',·1,·'']]],
73 ····['update_5fconstrain_5fgpu_5fimpl_2eh_44',·['update_constrain_gpu_impl.h',·['../update__constrain__gpu__impl_8h.xhtml',·1,·'']]],73 ····['update_5fconstrain_5fgpu_5fimpl_2eh_44',·['update_constrain_gpu_impl.h',·['../update__constrain__gpu__impl_8h.xhtml',·1,·'']]],
74 ····['update_5fconstrain_5fgpu_5fimpl_5fstubs_2ecpp_45',·['update_constrain_gpu_impl_stubs.cpp',·['../update__constrain__gpu__impl__stubs_8cpp.xhtml',·1,·'']]],74 ····['update_5fconstrain_5fgpu_5fimpl_5fstubs_2ecpp_45',·['update_constrain_gpu_impl_stubs.cpp',·['../update__constrain__gpu__impl__stubs_8cpp.xhtml',·1,·'']]],
75 ····['update_5fconstrain_5fgpu_5finternal_2eh_46',·['update_constrain_gpu_internal.h',·['../update__constrain__gpu__internal_8h.xhtml',·1,·'']]],75 ····['update_5fconstrain_5fgpu_5finternal_2eh_46',·['update_constrain_gpu_internal.h',·['../update__constrain__gpu__internal_8h.xhtml',·1,·'']]],
76 ····['update_5fconstrain_5fgpu_5finternal_5fsycl_2ecpp_47',·['update_constrain_gpu_internal_sycl.cpp',·['../update__constrain__gpu__internal__sycl_8cpp.xhtml',·1,·'']]],76 ····['update_5fconstrain_5fgpu_5finternal_5fsycl_2ecpp_47',·['update_constrain_gpu_internal_sycl.cpp',·['../update__constrain__gpu__internal__sycl_8cpp.xhtml',·1,·'']]],
Offset 127, 18 lines modifiedOffset 127, 18 lines modified
127 ····['updatepositions_87',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],127 ····['updatepositions_87',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],
128 ····['updateprevsteppullcom_88',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],128 ····['updateprevsteppullcom_88',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],
129 ····['updateprobabilityweightsandconvolvedbias_89',·['updateProbabilityWeightsAndConvolvedBias',·['../classgmx_1_1BiasState.xhtml#a9f7401159d5f59b63c09e34829643156',·1,·'gmx::BiasState']]],129 ····['updateprobabilityweightsandconvolvedbias_89',·['updateProbabilityWeightsAndConvolvedBias',·['../classgmx_1_1BiasState.xhtml#a9f7401159d5f59b63c09e34829643156',·1,·'gmx::BiasState']]],
130 ····['updatereferencetemperature_90',·['updatereferencetemperature',·['../classgmx_1_1StatePropagatorData_1_1ReferenceTemperatureHelper.xhtml#af1c1de5aaf87c8f24affe49bde37603b',·1,·'gmx::StatePropagatorData::ReferenceTemperatureHelper::updateReferenceTemperature()'],130 ····['updatereferencetemperature_90',·['updatereferencetemperature',·['../classgmx_1_1StatePropagatorData_1_1ReferenceTemperatureHelper.xhtml#af1c1de5aaf87c8f24affe49bde37603b',·1,·'gmx::StatePropagatorData::ReferenceTemperatureHelper::updateReferenceTemperature()'],
131 ········['../classgmx_1_1NoseHooverGroup.xhtml#aa3d71e0bea4cfdf3b6120a0cb1993acc',·1,·'gmx::NoseHooverGroup::updateReferenceTemperature()'],131 ········['../classgmx_1_1NoseHooverGroup.xhtml#aa3d71e0bea4cfdf3b6120a0cb1993acc',·1,·'gmx::NoseHooverGroup::updateReferenceTemperature()'],
132 ········['../classgmx_1_1StatePropagatorData.xhtml#aee30a9b7c159fb0a9bf500e79c5b36ad',·1,·'gmx::StatePropagatorData::updateReferenceTemperature()']132 ········['../classgmx_1_1StatePropagatorData.xhtml#aee30a9b7c159fb0a9bf500e79c5b36ad',·1,·'gmx::StatePropagatorData::updateReferenceTemperature()']
133 ····]],133 ····]],
134 ····['updatereferencetemperatureandintegral_91',·['updatereferencetemperatureandintegral',·['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#a19f20b178c4f10eb2de9ec991438d9f5',·1,·'gmx::NoseHooverTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],134 ····['updatereferencetemperatureandintegral_91',·['updatereferencetemperatureandintegral',·['../classgmx_1_1ITemperatureCouplingImpl.xhtml#a67d316d4990f6b3e3b91d4293102da71',·1,·'gmx::ITemperatureCouplingImpl::updateReferenceTemperatureAndIntegral()'],
135 ········['../classgmx_1_1ITemperatureCouplingImpl.xhtml#a67d316d4990f6b3e3b91d4293102da71',·1,·'gmx::ITemperatureCouplingImpl::updateReferenceTemperatureAndIntegral()'], 
136 ········['../classgmx_1_1VRescaleTemperatureCoupling.xhtml#ab4efc16ccfe24d5c4a080b6ef9027250',·1,·'gmx::VRescaleTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],135 ········['../classgmx_1_1VRescaleTemperatureCoupling.xhtml#ab4efc16ccfe24d5c4a080b6ef9027250',·1,·'gmx::VRescaleTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],
137 ········['../classgmx_1_1BerendsenTemperatureCoupling.xhtml#ad79e818a438bda7940ddf37e004c8a82',·1,·'gmx::BerendsenTemperatureCoupling::updateReferenceTemperatureAndIntegral()']136 ········['../classgmx_1_1BerendsenTemperatureCoupling.xhtml#ad79e818a438bda7940ddf37e004c8a82',·1,·'gmx::BerendsenTemperatureCoupling::updateReferenceTemperatureAndIntegral()'],
 137 ········['../classgmx_1_1NoseHooverTemperatureCoupling.xhtml#a19f20b178c4f10eb2de9ec991438d9f5',·1,·'gmx::NoseHooverTemperatureCoupling::updateReferenceTemperatureAndIntegral()']
138 ····]],138 ····]],
139 ····['updatesharedcorrelationtensortimeintegral_92',·['updateSharedCorrelationTensorTimeIntegral',·['../classgmx_1_1BiasState.xhtml#ab7dfefc2c90ee279effebe810c485dbc',·1,·'gmx::BiasState']]],139 ····['updatesharedcorrelationtensortimeintegral_92',·['updateSharedCorrelationTensorTimeIntegral',·['../classgmx_1_1BiasState.xhtml#ab7dfefc2c90ee279effebe810c485dbc',·1,·'gmx::BiasState']]],
140 ····['updatetargetweight_93',·['updateTargetWeight',·['../classgmx_1_1PointState.xhtml#a1d57397ae942af129a982a9f333fef51',·1,·'gmx::PointState']]],140 ····['updatetargetweight_93',·['updateTargetWeight',·['../classgmx_1_1PointState.xhtml#a1d57397ae942af129a982a9f333fef51',·1,·'gmx::PointState']]],
141 ····['updatevelocities_94',·['updatevelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx::updateVelocities()'],141 ····['updatevelocities_94',·['updatevelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx::updateVelocities()'],
142 ········['../structgmx_1_1test_1_1anonymous__namespace_02settle_8cpp_03_1_1SettleTestParameters.xhtml#aaaeba6d14001c6c245e8af771389df3c',·1,·'gmx::test::anonymous_namespace{settle.cpp}::SettleTestParameters::updateVelocities']142 ········['../structgmx_1_1test_1_1anonymous__namespace_02settle_8cpp_03_1_1SettleTestParameters.xhtml#aaaeba6d14001c6c245e8af771389df3c',·1,·'gmx::test::anonymous_namespace{settle.cpp}::SettleTestParameters::updateVelocities']
143 ····]],143 ····]],
144 ····['updateweight_95',·['updateWeight',·['../classgmx_1_1BiasParams.xhtml#a0592d5d3d02e79af3d0cd4ee7346a981',·1,·'gmx::BiasParams']]],144 ····['updateweight_95',·['updateWeight',·['../classgmx_1_1BiasParams.xhtml#a0592d5d3d02e79af3d0cd4ee7346a981',·1,·'gmx::BiasParams']]],
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Offset 888, 41 lines modifiedOffset 888, 41 lines modified
888 ····['arrayrefwithpadding_2eh_516',·['arrayrefwithpadding.h',·['../arrayrefwithpadding_8h.xhtml',·1,·'']]],888 ····['arrayrefwithpadding_2eh_516',·['arrayrefwithpadding.h',·['../arrayrefwithpadding_8h.xhtml',·1,·'']]],
889 ····['arrayrefwithpadding_3c_20gmx_3a_3abasicvector_20_3e_517',·['ArrayRefWithPadding&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1ArrayRefWithPadding.xhtml',·1,·'gmx']]],889 ····['arrayrefwithpadding_3c_20gmx_3a_3abasicvector_20_3e_517',·['ArrayRefWithPadding&lt;·gmx::BasicVector·&gt;',·['../classgmx_1_1ArrayRefWithPadding.xhtml',·1,·'gmx']]],
890 ····['arraysize_2eh_518',·['arraysize.h',·['../arraysize_8h.xhtml',·1,·'']]],890 ····['arraysize_2eh_518',·['arraysize.h',·['../arraysize_8h.xhtml',·1,·'']]],
891 ····['arraytype_519',·['arrayType',·['../structgmx_1_1PlanSetupData.xhtml#aa6392db2e4f96a2530d516427eae240d',·1,·'gmx::PlanSetupData']]],891 ····['arraytype_519',·['arrayType',·['../structgmx_1_1PlanSetupData.xhtml#aa6392db2e4f96a2530d516427eae240d',·1,·'gmx::PlanSetupData']]],
892 ····['arrivewaitbarrierval_5f_520',·['arriveWaitBarrierVal_',·['../structgmx_1_1nvshmemHaloExchangeOps.xhtml#ac73ed126de2b4132ff822c8fb68be92c',·1,·'gmx::nvshmemHaloExchangeOps']]],892 ····['arrivewaitbarrierval_5f_520',·['arriveWaitBarrierVal_',·['../structgmx_1_1nvshmemHaloExchangeOps.xhtml#ac73ed126de2b4132ff822c8fb68be92c',·1,·'gmx::nvshmemHaloExchangeOps']]],
893 ····['as_521',·['as',·['../structt__methoddata__same.xhtml#aab39d3304710c617c29aab8e2cbfbc5a',·1,·'t_methoddata_same']]],893 ····['as_521',·['as',·['../structt__methoddata__same.xhtml#aab39d3304710c617c29aab8e2cbfbc5a',·1,·'t_methoddata_same']]],
894 ····['as_20a_20library_522',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]],894 ····['as_20a_20library_522',·['Using·GROMACS·as·a·library',·['../page_usinglibrary.xhtml',·1,·'index']]],
895 ····['as_5fdvec_5farray_523',·['as_dvec_array',·['../namespacegmx.xhtml#ac635996b6d78ada40405ba91310641f7',·1,·'gmx::as_dvec_array(DVec·*x)'], 
896 ········['../namespacegmx.xhtml#ab435e743af1b412558e429022580056b',·1,·'gmx::as_dvec_array(const·DVec·*x)']895 ····['as_5fdvec_5farray_523',·['as_dvec_array',·['../namespacegmx.xhtml#ab435e743af1b412558e429022580056b',·1,·'gmx::as_dvec_array(const·DVec·*x)'],
 896 ········['../namespacegmx.xhtml#ac635996b6d78ada40405ba91310641f7',·1,·'gmx::as_dvec_array(DVec·*x)']
897 ····]],897 ····]],
 898 ····['as_5fivec_5farray_524',·['as_ivec_array',·['../namespacegmx.xhtml#ab7d47f82fdb0dceddb28d228ecc926f2',·1,·'gmx::as_ivec_array(IVec·*x)'],
898 ····['as_5fivec_5farray_524',·['as_ivec_array',·['../namespacegmx.xhtml#a169687020d64e828f0120aa553c4240b',·1,·'gmx::as_ivec_array(const·IVec·*x)'],899 ········['../namespacegmx.xhtml#a169687020d64e828f0120aa553c4240b',·1,·'gmx::as_ivec_array(const·IVec·*x)']
899 ········['../namespacegmx.xhtml#ab7d47f82fdb0dceddb28d228ecc926f2',·1,·'gmx::as_ivec_array(IVec·*x)'] 
900 ····]],900 ····]],
 901 ····['as_5frvec_5farray_525',·['as_rvec_array',·['../namespacegmx.xhtml#ac36e90ef229d4fc88ba16409aef0b759',·1,·'gmx::as_rvec_array(RVec·*x)'],
901 ····['as_5frvec_5farray_525',·['as_rvec_array',·['../namespacegmx.xhtml#aede03a44c13df763bdd1d8d9d0887dda',·1,·'gmx::as_rvec_array(const·RVec·*x)'],902 ········['../namespacegmx.xhtml#aede03a44c13df763bdd1d8d9d0887dda',·1,·'gmx::as_rvec_array(const·RVec·*x)']
902 ········['../namespacegmx.xhtml#ac36e90ef229d4fc88ba16409aef0b759',·1,·'gmx::as_rvec_array(RVec·*x)'] 
903 ····]],903 ····]],
904 ····['as_5fs_5fsorted_526',·['as_s_sorted',·['../structt__methoddata__same.xhtml#a8e60d150d29d86b285a3e90c249f6b8e',·1,·'t_methoddata_same']]],904 ····['as_5fs_5fsorted_526',·['as_s_sorted',·['../structt__methoddata__same.xhtml#a8e60d150d29d86b285a3e90c249f6b8e',·1,·'t_methoddata_same']]],
905 ····['as_5fvec_527',·['as_vec',·['../classgmx_1_1BasicVector.xhtml#a751f212c63603b0c310ea931453c3531',·1,·'gmx::BasicVector::as_vec()'],905 ····['as_5fvec_527',·['as_vec',·['../classgmx_1_1BasicVector.xhtml#a751f212c63603b0c310ea931453c3531',·1,·'gmx::BasicVector::as_vec()'],
906 ········['../classgmx_1_1BasicVector.xhtml#a096b39d916263bc829f56ac184f176a9',·1,·'gmx::BasicVector::as_vec()·const']906 ········['../classgmx_1_1BasicVector.xhtml#a096b39d916263bc829f56ac184f176a9',·1,·'gmx::BasicVector::as_vec()·const']
907 ····]],907 ····]],
908 ····['as_5fvec_5farray_528',·['as_vec_array',·['../namespacegmx.xhtml#af1a995d2d5d21983a662ab3e79e2b2e3',·1,·'gmx::as_vec_array(const·BasicVector&lt;·ValueType·&gt;·*x)'],908 ····['as_5fvec_5farray_528',·['as_vec_array',·['../namespacegmx.xhtml#af1a995d2d5d21983a662ab3e79e2b2e3',·1,·'gmx::as_vec_array(const·BasicVector&lt;·ValueType·&gt;·*x)'],
909 ········['../namespacegmx.xhtml#adbccce10168efa3d28a2f7d3b644df37',·1,·'gmx::as_vec_array(BasicVector&lt;·ValueType·&gt;·*x)']909 ········['../namespacegmx.xhtml#adbccce10168efa3d28a2f7d3b644df37',·1,·'gmx::as_vec_array(BasicVector&lt;·ValueType·&gt;·*x)']
910 ····]],910 ····]],
911 ····['asabsolute_529',·['asAbsolute',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a1256c4a2e308cddc83601e72d07ea9ff',·1,·'gmx::test::FloatingPointDifference']]],911 ····['asabsolute_529',·['asAbsolute',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a1256c4a2e308cddc83601e72d07ea9ff',·1,·'gmx::test::FloatingPointDifference']]],
912 ····['asconstview_530',·['asConstView',·['../classgmx_1_1MultiDimArray.xhtml#a5dd95fca66f9da9723365d7bbe9df05a',·1,·'gmx::MultiDimArray']]],912 ····['asconstview_530',·['asConstView',·['../classgmx_1_1MultiDimArray.xhtml#a5dd95fca66f9da9723365d7bbe9df05a',·1,·'gmx::MultiDimArray']]],
913 ····['asfloat3_531',·['asfloat3',·['../typecasts__cuda__hip_8h.xhtml#a907e7d1b77f6ed53ba9aee03de2e104e',·1,·'asFloat3(gmx::RVec·*in):&#160;typecasts_cuda_hip.h'],913 ····['asfloat3_531',·['asfloat3',·['../typecasts__cuda__hip_8h.xhtml#a907e7d1b77f6ed53ba9aee03de2e104e',·1,·'asFloat3(gmx::RVec·*in):&#160;typecasts_cuda_hip.h'],
914 ········['../typecasts__cuda__hip_8h.xhtml#a5b3b274c6d609569eeb80fdcbe90793b',·1,·'asFloat3(const·gmx::RVec·*in):&#160;typecasts_cuda_hip.h']914 ········['../typecasts__cuda__hip_8h.xhtml#a5b3b274c6d609569eeb80fdcbe90793b',·1,·'asFloat3(const·gmx::RVec·*in):&#160;typecasts_cuda_hip.h']
915 ····]],915 ····]],
916 ····['asfloat3pointer_532',·['asfloat3pointer',·['../typecasts__cuda__hip_8h.xhtml#a11a331229d7c98f7483574dec7798425',·1,·'asFloat3Pointer(gmx::RVec·**in):&#160;typecasts_cuda_hip.h'], 
917 ········['../typecasts__cuda__hip_8h.xhtml#ab65b218556c9108ce68d7332f0a801f8',·1,·'asFloat3Pointer(const·gmx::RVec·*const·*in):&#160;typecasts_cuda_hip.h']916 ····['asfloat3pointer_532',·['asfloat3pointer',·['../typecasts__cuda__hip_8h.xhtml#ab65b218556c9108ce68d7332f0a801f8',·1,·'asFloat3Pointer(const·gmx::RVec·*const·*in):&#160;typecasts_cuda_hip.h'],
 917 ········['../typecasts__cuda__hip_8h.xhtml#a11a331229d7c98f7483574dec7798425',·1,·'asFloat3Pointer(gmx::RVec·**in):&#160;typecasts_cuda_hip.h']
918 ····]],918 ····]],
919 ····['asgenericfloat3pointer_533',·['asgenericfloat3pointer',·['../namespacegmx.xhtml#a61d1fa4d0073e932d5ea53fd4ec968e9',·1,·'gmx::asGenericFloat3Pointer(C·&amp;in)'],919 ····['asgenericfloat3pointer_533',·['asgenericfloat3pointer',·['../namespacegmx.xhtml#a7cf8c0c79ed50d630c676a108cff651e',·1,·'gmx::asGenericFloat3Pointer(T·*in)'],
920 ········['../namespacegmx.xhtml#a7cf8c0c79ed50d630c676a108cff651e',·1,·'gmx::asGenericFloat3Pointer(T·*in)'], 
921 ········['../namespacegmx.xhtml#a790f4239e154b040ddbcef4a1d3122ae',·1,·'gmx::asGenericFloat3Pointer(const·T·*in)'],920 ········['../namespacegmx.xhtml#a790f4239e154b040ddbcef4a1d3122ae',·1,·'gmx::asGenericFloat3Pointer(const·T·*in)'],
 921 ········['../namespacegmx.xhtml#a61d1fa4d0073e932d5ea53fd4ec968e9',·1,·'gmx::asGenericFloat3Pointer(C·&amp;in)'],
922 ········['../namespacegmx.xhtml#a1b0b8846fcb8364fafd83a5592f12108',·1,·'gmx::asGenericFloat3Pointer(const·C·&amp;in)']922 ········['../namespacegmx.xhtml#a1b0b8846fcb8364fafd83a5592f12108',·1,·'gmx::asGenericFloat3Pointer(const·C·&amp;in)']
923 ····]],923 ····]],
924 ····['asin_534',·['asin',·['../namespacegmx.xhtml#a3d5120df9c0bf437e64c806a7cfdad02',·1,·'gmx::asin(float·x)'],924 ····['asin_534',·['asin',·['../namespacegmx.xhtml#a3d5120df9c0bf437e64c806a7cfdad02',·1,·'gmx::asin(float·x)'],
925 ········['../namespacegmx.xhtml#ab02c7d47595f11074fbfedff40145544',·1,·'gmx::asin(double·x)']925 ········['../namespacegmx.xhtml#ab02c7d47595f11074fbfedff40145544',·1,·'gmx::asin(double·x)']
926 ····]],926 ····]],
927 ····['asinsingleaccuracy_535',·['asinSingleAccuracy',·['../namespacegmx.xhtml#a98465e562d7b1b24755bc693db04c8f5',·1,·'gmx']]],927 ····['asinsingleaccuracy_535',·['asinSingleAccuracy',·['../namespacegmx.xhtml#a98465e562d7b1b24755bc693db04c8f5',·1,·'gmx']]],
928 ····['asize_536',·['asize',·['../group__module__utility.xhtml#ga2f549c8a29e4b43b862a96314a66a5fa',·1,·'arraysize.h']]],928 ····['asize_536',·['asize',·['../group__module__utility.xhtml#ga2f549c8a29e4b43b862a96314a66a5fa',·1,·'arraysize.h']]],
Offset 951, 159 lines modifiedOffset 951, 159 lines modified
951 ····['assignpositionrestraintsforatom_557',·['assignPositionRestraintsForAtom',·['../localtopology_8cpp.xhtml#afb4fa529774cf67304776e604b9879fd',·1,·'localtopology.cpp']]],951 ····['assignpositionrestraintsforatom_557',·['assignPositionRestraintsForAtom',·['../localtopology_8cpp.xhtml#afb4fa529774cf67304776e604b9879fd',·1,·'localtopology.cpp']]],
952 ····['assignvsitestosingletask_558',·['assignVsitesToSingleTask',·['../namespacegmx.xhtml#a1eee8bc37f540f65a107fa21a102c09d',·1,·'gmx']]],952 ····['assignvsitestosingletask_558',·['assignVsitesToSingleTask',·['../namespacegmx.xhtml#a1eee8bc37f540f65a107fa21a102c09d',·1,·'gmx']]],
953 ····['assignvsitestothread_559',·['assignVsitesToThread',·['../namespacegmx.xhtml#a8ff9857961193a9bd5fbd1fb027ba44f',·1,·'gmx']]],953 ····['assignvsitestothread_559',·['assignVsitesToThread',·['../namespacegmx.xhtml#a8ff9857961193a9bd5fbd1fb027ba44f',·1,·'gmx']]],
954 ····['associativity_560',·['associativity',·['../structgmx_1_1HardwareTopology_1_1Cache.xhtml#ad5a56cc20c9ca27eb6276374e411a430',·1,·'gmx::HardwareTopology::Cache']]],954 ····['associativity_560',·['associativity',·['../structgmx_1_1HardwareTopology_1_1Cache.xhtml#ad5a56cc20c9ca27eb6276374e411a430',·1,·'gmx::HardwareTopology::Cache']]],
955 ····['asulps_561',·['asUlps',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a64f20cf7b256513aa8bdda6c142f7dae',·1,·'gmx::test::FloatingPointDifference']]],955 ····['asulps_561',·['asUlps',·['../classgmx_1_1test_1_1FloatingPointDifference.xhtml#a64f20cf7b256513aa8bdda6c142f7dae',·1,·'gmx::test::FloatingPointDifference']]],
956 ····['asview_562',·['asView',·['../classgmx_1_1MultiDimArray.xhtml#a23a1fb8f2c0045928c48ccb88ef85632',·1,·'gmx::MultiDimArray']]],956 ····['asview_562',·['asView',·['../classgmx_1_1MultiDimArray.xhtml#a23a1fb8f2c0045928c48ccb88ef85632',·1,·'gmx::MultiDimArray']]],
957 ····['async_563',·['Async',·['../gpu__utils_8h.xhtml#aed6d99acc2a7b8495f08fa2d9d2277eba24aa4117da86c41684ad25742832dfa6',·1,·'gpu_utils.h']]],957 ····['async_563',·['Async',·['../gpu__utils_8h.xhtml#aed6d99acc2a7b8495f08fa2d9d2277eba24aa4117da86c41684ad25742832dfa6',·1,·'gpu_utils.h']]],
 958 ····['at_564',·['at',·['../classgmx_1_1EnergyFrame.xhtml#a73ace4971cafa88adaceea02aea4646e',·1,·'gmx::EnergyFrame::at()'],
 959 ········['../classgmx__ga2la__t.xhtml#ad8f304cbe18bbec9715f837fd1e2aa93',·1,·'gmx_ga2la_t::at()'],
958 ····['at_564',·['at',·['../classgmx_1_1ListOfLists.xhtml#a49d32c6ff1a5eca209be358475e05713',·1,·'gmx::ListOfLists::at()'], 
959 ········['../classgmx_1_1ArrayRef.xhtml#adc8ea4073c94eb246b0027c4bd7d01da',·1,·'gmx::ArrayRef::at()'], 
960 ········['../classStringTable.xhtml#adcc938ba043e0c531773e64d87d00827',·1,·'StringTable::at()'], 
961 ········['../classgmx_1_1FixedCapacityVector.xhtml#a438cb41d4f31da753c8d7d36256c0c41',·1,·'gmx::FixedCapacityVector::at(size_type·n)'], 
962 ········['../classgmx_1_1FixedCapacityVector.xhtml#a7a5d2f452d79950647ced1d370628f76',·1,·'gmx::FixedCapacityVector::at(size_type·n)·const'],960 ········['../classgmx_1_1FixedCapacityVector.xhtml#a7a5d2f452d79950647ced1d370628f76',·1,·'gmx::FixedCapacityVector::at(size_type·n)·const'],
963 ········['../classgmx_1_1EnergyFrame.xhtml#a73ace4971cafa88adaceea02aea4646e',·1,·'gmx::EnergyFrame::at()'], 
964 ········['../classgmx__ga2la__t.xhtml#ad8f304cbe18bbec9715f837fd1e2aa93',·1,·'gmx_ga2la_t::at()']961 ········['../classgmx_1_1FixedCapacityVector.xhtml#a438cb41d4f31da753c8d7d36256c0c41',·1,·'gmx::FixedCapacityVector::at(size_type·n)'],
 962 ········['../classStringTable.xhtml#adcc938ba043e0c531773e64d87d00827',·1,·'StringTable::at()'],
 963 ········['../classgmx_1_1ArrayRef.xhtml#adc8ea4073c94eb246b0027c4bd7d01da',·1,·'gmx::ArrayRef::at()'],
 964 ········['../classgmx_1_1ListOfLists.xhtml#a49d32c6ff1a5eca209be358475e05713',·1,·'gmx::ListOfLists::at()']
965 ····]],965 ····]],
966 ····['at_5fend_565',·['at_end',·['../structgmx__domdec__specat__comm__t.xhtml#acfc1ad88275feb891d5eaf41e6fe31b6',·1,·'gmx_domdec_specat_comm_t']]],966 ····['at_5fend_565',·['at_end',·['../structgmx__domdec__specat__comm__t.xhtml#acfc1ad88275feb891d5eaf41e6fe31b6',·1,·'gmx_domdec_specat_comm_t']]],
967 ····['at_5fstart_566',·['at_start',·['../structgmx__domdec__specat__comm__t.xhtml#a55cac48fb79ab129c6e54ecd71b10d66',·1,·'gmx_domdec_specat_comm_t']]],967 ····['at_5fstart_566',·['at_start',·['../structgmx__domdec__specat__comm__t.xhtml#a55cac48fb79ab129c6e54ecd71b10d66',·1,·'gmx_domdec_specat_comm_t']]],
968 ····['atan_567',·['atan',·['../namespacegmx.xhtml#a1afbc2ada56f899a8d3dc5c61530e28b',·1,·'gmx::atan(float·x)'],968 ····['atan_567',·['atan',·['../namespacegmx.xhtml#a1afbc2ada56f899a8d3dc5c61530e28b',·1,·'gmx::atan(float·x)'],
969 ········['../namespacegmx.xhtml#af15e6f3962e035d69013bd91621fd9f8',·1,·'gmx::atan(double·x)']969 ········['../namespacegmx.xhtml#af15e6f3962e035d69013bd91621fd9f8',·1,·'gmx::atan(double·x)']
970 ····]],970 ····]],
971 ····['atan2_568',·['atan2',·['../namespacegmx.xhtml#aed8336a58abddcdb6afa7835138ecf46',·1,·'gmx::atan2(float·y,·float·x)'], 
972 ········['../namespacegmx.xhtml#aa70a1aa5e9c161a2770d0f9b7eca1805',·1,·'gmx::atan2(double·y,·double·x)']971 ····['atan2_568',·['atan2',·['../namespacegmx.xhtml#aa70a1aa5e9c161a2770d0f9b7eca1805',·1,·'gmx::atan2(double·y,·double·x)'],
 972 ········['../namespacegmx.xhtml#aed8336a58abddcdb6afa7835138ecf46',·1,·'gmx::atan2(float·y,·float·x)']
973 ····]],973 ····]],
974 ····['atan2singleaccuracy_569',·['atan2SingleAccuracy',·['../namespacegmx.xhtml#a2552094c1be29e087e1e85ae02fb0c7a',·1,·'gmx']]],974 ····['atan2singleaccuracy_569',·['atan2SingleAccuracy',·['../namespacegmx.xhtml#a2552094c1be29e087e1e85ae02fb0c7a',·1,·'gmx']]],
975 ····['atansingleaccuracy_570',·['atanSingleAccuracy',·['../namespacegmx.xhtml#a44ca54cb014d2f33b98f3d523d90a2f5',·1,·'gmx']]],975 ····['atansingleaccuracy_570',·['atanSingleAccuracy',·['../namespacegmx.xhtml#a44ca54cb014d2f33b98f3d523d90a2f5',·1,·'gmx']]],
976 ····['atdat_571',·['atdat',·['../structgmx_1_1NbnxmGpu.xhtml#ac977a0cf05953a53ff1df8cd01d06853',·1,·'gmx::NbnxmGpu::atdat'],976 ····['atdat_571',·['atdat',·['../structgmx_1_1NbnxmGpu.xhtml#ac977a0cf05953a53ff1df8cd01d06853',·1,·'gmx::NbnxmGpu::atdat'],
977 ········['../structgmx_1_1GpuTimers.xhtml#ae992b44d7d09dcf79d1347f9219d3402',·1,·'gmx::GpuTimers::atdat']977 ········['../structgmx_1_1GpuTimers.xhtml#ae992b44d7d09dcf79d1347f9219d3402',·1,·'gmx::GpuTimers::atdat']
978 ····]],978 ····]],
979 ····['atf_572',·['atf',·['../classgmx_1_1Lincs.xhtml#a0c17addba5fc06083dd777639123fbee',·1,·'gmx::Lincs']]],979 ····['atf_572',·['atf',·['../classgmx_1_1Lincs.xhtml#a0c17addba5fc06083dd777639123fbee',·1,·'gmx::Lincs']]],
980 ····['atnr_573',·['atnr',·['../structgmx__ffparams__t.xhtml#a0bbf906344980fc3d5af5872db5b8ff4',·1,·'gmx_ffparams_t::atnr'],980 ····['atnr_573',·['atnr',·['../structgmx__ffparams__t.xhtml#a0bbf906344980fc3d5af5872db5b8ff4',·1,·'gmx_ffparams_t::atnr'],
981 ········['../structt__idef.xhtml#ac0de032c9fe33bc65755c359d7724d71',·1,·'t_idef::atnr']981 ········['../structt__idef.xhtml#ac0de032c9fe33bc65755c359d7724d71',·1,·'t_idef::atnr']
982 ····]],982 ····]],
983 ····['atom_574',·['atom',·['../classAtomProxy.xhtml#a74dd8b9d35b876b3cf4a3b4a8e772cfc',·1,·'AtomProxy::atom()'], 
984 ········['../structt__nblist_1_1JEntry.xhtml#a41ea68a69e0699cbc7a9809dbcf739ec',·1,·'t_nblist::JEntry::atom'],983 ····['atom_574',·['atom',·['../structt__nblist_1_1JEntry.xhtml#a41ea68a69e0699cbc7a9809dbcf739ec',·1,·'t_nblist::JEntry::atom'],
985 ········['../structPreprocessResidue.xhtml#acb4af191ced642266b5124549f2bb90e',·1,·'PreprocessResidue::atom'], 
986 ········['../structMoleculePatch.xhtml#a1d1bc0e0e73fa1aed4ca493c981fb464',·1,·'MoleculePatch::atom'],984 ········['../classAtomProxy.xhtml#a74dd8b9d35b876b3cf4a3b4a8e772cfc',·1,·'AtomProxy::atom()'],
 985 ········['../structt__nblist_1_1IEntry.xhtml#a159a337c3a0dff382aa71c1d327272bf',·1,·'t_nblist::IEntry::atom'],
987 ········['../structgmx_1_1AtomIndex.xhtml#a86c46467c265c752b180d28dac63910e',·1,·'gmx::AtomIndex::atom'],986 ········['../structgmx_1_1AtomIndex.xhtml#a86c46467c265c752b180d28dac63910e',·1,·'gmx::AtomIndex::atom'],
988 ········['../structt__nblist_1_1IEntry.xhtml#a159a337c3a0dff382aa71c1d327272bf',·1,·'t_nblist::IEntry::atom']987 ········['../structMoleculePatch.xhtml#a1d1bc0e0e73fa1aed4ca493c981fb464',·1,·'MoleculePatch::atom'],
 988 ········['../structPreprocessResidue.xhtml#acb4af191ced642266b5124549f2bb90e',·1,·'PreprocessResidue::atom']
989 ····]],989 ····]],
990 ····['atom_20cluster_20non_20bonded_20algorithm_575',·['The·NxM·atom-cluster·non-bonded·algorithm',·['../page_nbnxm.xhtml',·1,·'index']]],990 ····['atom_20cluster_20non_20bonded_20algorithm_575',·['The·NxM·atom-cluster·non-bonded·algorithm',·['../page_nbnxm.xhtml',·1,·'index']]],
991 ····['atom1_576',·['atom1',·['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#aa1b18c7a3742b0f0a0dc5c16c0fd4f63',·1,·'VirtualSiteTopology::VirtualSiteBond::atom1'], 
992 ········['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#af57ae380179f35813f7df5fbfc9974e6',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom1']991 ····['atom1_576',·['atom1',·['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#af57ae380179f35813f7df5fbfc9974e6',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom1'],
 992 ········['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#aa1b18c7a3742b0f0a0dc5c16c0fd4f63',·1,·'VirtualSiteTopology::VirtualSiteBond::atom1']
993 ····]],993 ····]],
994 ····['atom2_577',·['atom2',·['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#ab9f07b4bfbc4fdfab7cb68c97b07d65f',·1,·'VirtualSiteTopology::VirtualSiteBond::atom2'],994 ····['atom2_577',·['atom2',·['../structVirtualSiteTopology_1_1VirtualSiteBond.xhtml#ab9f07b4bfbc4fdfab7cb68c97b07d65f',·1,·'VirtualSiteTopology::VirtualSiteBond::atom2'],
995 ········['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#a4e6b102e3e81587c06285605cadb6cf2',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom2']995 ········['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#a4e6b102e3e81587c06285605cadb6cf2',·1,·'VirtualSiteTopology::VirtualSiteAngle::atom2']
996 ····]],996 ····]],
997 ····['atom2constraints_5fmoltype_578',·['atom2constraints_moltype',·['../classgmx_1_1Constraints.xhtml#ae549351ff9c0499f19c9973ce201a447',·1,·'gmx::Constraints']]],997 ····['atom2constraints_5fmoltype_578',·['atom2constraints_moltype',·['../classgmx_1_1Constraints.xhtml#ae549351ff9c0499f19c9973ce201a447',·1,·'gmx::Constraints']]],
998 ····['atom2settle_5fmoltype_579',·['atom2settle_moltype',·['../classgmx_1_1Constraints.xhtml#a7661c09da92e38f1b6bb66aa92b5f13b',·1,·'gmx::Constraints']]],998 ····['atom2settle_5fmoltype_579',·['atom2settle_moltype',·['../classgmx_1_1Constraints.xhtml#a7661c09da92e38f1b6bb66aa92b5f13b',·1,·'gmx::Constraints']]],
999 ····['atom2vsitebond_580',·['Atom2VsiteBond',·['../structAtom2VsiteBond.xhtml',·1,·'']]],999 ····['atom2vsitebond_580',·['Atom2VsiteBond',·['../structAtom2VsiteBond.xhtml',·1,·'']]],
1000 ····['atom3_581',·['atom3',·['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#a13def359d1298b31a803c856da142ec7',·1,·'VirtualSiteTopology::VirtualSiteAngle']]],1000 ····['atom3_581',·['atom3',·['../structVirtualSiteTopology_1_1VirtualSiteAngle.xhtml#a13def359d1298b31a803c856da142ec7',·1,·'VirtualSiteTopology::VirtualSiteAngle']]],
1001 ····['atom_5fto_5fx_5findex_582',·['atom_to_x_index',·['../namespacegmx.xhtml#ad564a95065204fd06ea7ef304a1a8065',·1,·'gmx']]],1001 ····['atom_5fto_5fx_5findex_582',·['atom_to_x_index',·['../namespacegmx.xhtml#ad564a95065204fd06ea7ef304a1a8065',·1,·'gmx']]],
1002 ····['atomareas_5f_583',·['atomAreas_',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1SasaModuleData.xhtml#aaa6a3ef895fa4220cf874abbd824ad79',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData']]],1002 ····['atomareas_5f_583',·['atomAreas_',·['../classgmx_1_1analysismodules_1_1anonymous__namespace_02sasa_8cpp_03_1_1SasaModuleData.xhtml#aaa6a3ef895fa4220cf874abbd824ad79',·1,·'gmx::analysismodules::anonymous_namespace{sasa.cpp}::SasaModuleData']]],
1003 ····['atomchargefromatomtype_584',·['atomChargeFromAtomType',·['../classPreprocessingAtomTypes.xhtml#ad6069bc68554bcd536f6194b46064710',·1,·'PreprocessingAtomTypes']]],1003 ····['atomchargefromatomtype_584',·['atomChargeFromAtomType',·['../classPreprocessingAtomTypes.xhtml#ad6069bc68554bcd536f6194b46064710',·1,·'PreprocessingAtomTypes']]],
1004 ····['atomcharges_585',·['atomCharges',·['../classgmx_1_1QMMMTopologyPreprocessor.xhtml#ae6a04829cb46b787647a09486bad0fc9',·1,·'gmx::QMMMTopologyPreprocessor']]],1004 ····['atomcharges_585',·['atomCharges',·['../classgmx_1_1QMMMTopologyPreprocessor.xhtml#ae6a04829cb46b787647a09486bad0fc9',·1,·'gmx::QMMMTopologyPreprocessor']]],
1005 ····['atomcount_586',·['atomcount',·['../classgmx_1_1SelectionPosition.xhtml#a77cd685c296f9544a7d9945faf93e851',·1,·'gmx::SelectionPosition::atomCount()'],1005 ····['atomcount_586',·['atomcount',·['../classgmx_1_1SelectionPosition.xhtml#a77cd685c296f9544a7d9945faf93e851',·1,·'gmx::SelectionPosition::atomCount()'],
1006 ········['../classgmx_1_1Selection.xhtml#ab38cecc3514bb8bf51f6578855d9c991',·1,·'gmx::Selection::atomCount()'], 
1007 ········['../structgmx_1_1analysismodules_1_1anonymous__namespace_02msd_8cpp_03_1_1MoleculeData.xhtml#af3eee2e624cdef793147e6f1e2658af7',·1,·'gmx::analysismodules::anonymous_namespace{msd.cpp}::MoleculeData::atomCount']1006 ········['../structgmx_1_1analysismodules_1_1anonymous__namespace_02msd_8cpp_03_1_1MoleculeData.xhtml#af3eee2e624cdef793147e6f1e2658af7',·1,·'gmx::analysismodules::anonymous_namespace{msd.cpp}::MoleculeData::atomCount'],
 1007 ········['../classgmx_1_1Selection.xhtml#ab38cecc3514bb8bf51f6578855d9c991',·1,·'gmx::Selection::atomCount()']
1008 ····]],1008 ····]],
1009 ····['atomdata_587',·['AtomData',·['../structgmx_1_1test_1_1anonymous__namespace_02nb__free__energy_8cpp_03_1_1AtomData.xhtml',·1,·'gmx::test::anonymous_namespace{nb_free_energy.cpp}']]],1009 ····['atomdata_587',·['AtomData',·['../structgmx_1_1test_1_1anonymous__namespace_02nb__free__energy_8cpp_03_1_1AtomData.xhtml',·1,·'gmx::test::anonymous_namespace{nb_free_energy.cpp}']]],
1010 ····['atomdata_2eh_588',·['atomdata.h',·['../atomdata_8h.xhtml',·1,·'']]],1010 ····['atomdata_2eh_588',·['atomdata.h',·['../atomdata_8h.xhtml',·1,·'']]],
1011 ····['atomdata_5fadd_5fnbat_5ff_5fto_5ff_589',·['atomdata_add_nbat_f_to_f',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a03491ccd95e5a3134f583a4aaadfe472',·1,·'gmx::nonbonded_verlet_t']]],1011 ····['atomdata_5fadd_5fnbat_5ff_5fto_5ff_589',·['atomdata_add_nbat_f_to_f',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a03491ccd95e5a3134f583a4aaadfe472',·1,·'gmx::nonbonded_verlet_t']]],
1012 ····['atomdata_5finit_5fcopy_5fx_5fto_5fnbat_5fx_5fgpu_590',·['atomdata_init_copy_x_to_nbat_x_gpu',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a53aa5937052b8f5ce0af68e3565cd8bb',·1,·'gmx::nonbonded_verlet_t']]],1012 ····['atomdata_5finit_5fcopy_5fx_5fto_5fnbat_5fx_5fgpu_590',·['atomdata_init_copy_x_to_nbat_x_gpu',·['../structgmx_1_1nonbonded__verlet__t.xhtml#a53aa5937052b8f5ce0af68e3565cd8bb',·1,·'gmx::nonbonded_verlet_t']]],
1013 ····['atomdensity_591',·['atomDensity',·['../structgmx_1_1GridDimensions.xhtml#a0ae1a87155a32c1a6f8f8ef77d2bb8d4',·1,·'gmx::GridDimensions']]],1013 ····['atomdensity_591',·['atomDensity',·['../structgmx_1_1GridDimensions.xhtml#a0ae1a87155a32c1a6f8f8ef77d2bb8d4',·1,·'gmx::GridDimensions']]],
1014 ····['atomdistribution_592',·['atomdistribution',·['../structAtomDistribution.xhtml',·1,·'AtomDistribution'],1014 ····['atomdistribution_592',·['atomdistribution',·['../structAtomDistribution.xhtml',·1,·'AtomDistribution'],
1015 ········['../structAtomDistribution.xhtml#a3e78846a5179ea068294babefa37ca6b',·1,·'AtomDistribution::AtomDistribution()']1015 ········['../structAtomDistribution.xhtml#a3e78846a5179ea068294babefa37ca6b',·1,·'AtomDistribution::AtomDistribution()']
1016 ····]],1016 ····]],
1017 ····['atomdistribution_2eh_593',·['atomdistribution.h',·['../atomdistribution_8h.xhtml',·1,·'']]],1017 ····['atomdistribution_2eh_593',·['atomdistribution.h',·['../atomdistribution_8h.xhtml',·1,·'']]],
 1018 ····['atomgroups_594',·['atomgroups',·['../structAtomDistribution.xhtml#aa1dd38e0aa002a1f4a3327f96aa5aae2',·1,·'AtomDistribution::atomGroups'],
1018 ····['atomgroups_594',·['atomgroups',·['../structAtomDistribution_1_1DomainAtomGroups.xhtml#a338e43266916f1208029118ca3d5dc3d',·1,·'AtomDistribution::DomainAtomGroups::atomGroups'],1019 ········['../structAtomDistribution_1_1DomainAtomGroups.xhtml#a338e43266916f1208029118ca3d5dc3d',·1,·'AtomDistribution::DomainAtomGroups::atomGroups']
1019 ········['../structAtomDistribution.xhtml#aa1dd38e0aa002a1f4a3327f96aa5aae2',·1,·'AtomDistribution::atomGroups'] 
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Offset 65, 50 lines modifiedOffset 65, 50 lines modified
65 ····['baselatency_27',·['baseLatency',·['../structgmx_1_1HardwareTopology_1_1Numa.xhtml#ae5953a3434aa195be6ec0af0c98461d0',·1,·'gmx::HardwareTopology::Numa']]],65 ····['baselatency_27',·['baseLatency',·['../structgmx_1_1HardwareTopology_1_1Numa.xhtml#ae5953a3434aa195be6ec0af0c98461d0',·1,·'gmx::HardwareTopology::Numa']]],
66 ····['basenetwork_2eh_28',·['basenetwork.h',·['../basenetwork_8h.xhtml',·1,·'']]],66 ····['basenetwork_2eh_28',·['basenetwork.h',·['../basenetwork_8h.xhtml',·1,·'']]],
67 ····['baseversion_2eh_29',·['baseversion.h',·['../baseversion_8h.xhtml',·1,·'']]],67 ····['baseversion_2eh_29',·['baseversion.h',·['../baseversion_8h.xhtml',·1,·'']]],
68 ····['baseversion_5fgen_2eh_30',·['baseversion_gen.h',·['../baseversion__gen_8h.xhtml',·1,·'']]],68 ····['baseversion_5fgen_2eh_30',·['baseversion_gen.h',·['../baseversion__gen_8h.xhtml',·1,·'']]],
69 ····['basic_31',·['basic',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::SelectionCollection::Impl::Basic'],69 ····['basic_31',·['basic',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::SelectionCollection::Impl::Basic'],
70 ········['../classgmx_1_1HardwareTopology.xhtml#aa94ffc2c936d76ba16f1938f449cfaa8a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::HardwareTopology::Basic']70 ········['../classgmx_1_1HardwareTopology.xhtml#aa94ffc2c936d76ba16f1938f449cfaa8a972e73b7a882d0802a4e3a16946a2f94',·1,·'gmx::HardwareTopology::Basic']
71 ····]],71 ····]],
 72 ····['basic_5fmdspan_32',·['basic_mdspan',·['../classgmx_1_1basic__mdspan.xhtml#a1af35e8aadb8ddbe4a239879e3db6238',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan&lt;·OtherElementType,·OtherExtents,·OtherLayoutPolicy,·OtherAccessor·&gt;·&amp;rhs)·noexcept'],
72 ····['basic_5fmdspan_32',·['basic_mdspan',·['../classgmx_1_1basic__mdspan.xhtml#aee5fbcbcd53cd39660f4a224aa28055b',·1,·'gmx::basic_mdspan::basic_mdspan(basic_mdspan·&amp;&amp;other)·noexcept=default'], 
73 ········['../classgmx_1_1basic__mdspan.xhtml#a3fb425dfe9f5d47d8575a3a5ffe15356',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan·&amp;other)·noexcept=default'], 
74 ········['../classgmx_1_1basic__mdspan.xhtml#a023bf1df41290714a1eb67ee9a952ef0',·1,·'gmx::basic_mdspan::basic_mdspan()·noexcept'], 
75 ········['../classgmx_1_1basic__mdspan.xhtml#a96da2575cb94ba65feb904f78a2bb5eb',·1,·'gmx::basic_mdspan::basic_mdspan(const·U·&amp;other)'],73 ········['../classgmx_1_1basic__mdspan.xhtml#a96da2575cb94ba65feb904f78a2bb5eb',·1,·'gmx::basic_mdspan::basic_mdspan(const·U·&amp;other)'],
76 ········['../classgmx_1_1basic__mdspan.xhtml#aaff0fad86e9316fd92ad9ed713522e62',·1,·'gmx::basic_mdspan::basic_mdspan(U·&amp;&amp;other)'],74 ········['../classgmx_1_1basic__mdspan.xhtml#aaff0fad86e9316fd92ad9ed713522e62',·1,·'gmx::basic_mdspan::basic_mdspan(U·&amp;&amp;other)'],
77 ········['../classgmx_1_1basic__mdspan.xhtml#a869a9eefe1ee5fdbe009f0970533b6c4',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&amp;m,·const·accessor_type·&amp;a)·noexcept'],75 ········['../classgmx_1_1basic__mdspan.xhtml#a869a9eefe1ee5fdbe009f0970533b6c4',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&amp;m,·const·accessor_type·&amp;a)·noexcept'],
78 ········['../classgmx_1_1basic__mdspan.xhtml#ad98e5109d35223338f274e3bdd850622',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&amp;m)·noexcept'],76 ········['../classgmx_1_1basic__mdspan.xhtml#ad98e5109d35223338f274e3bdd850622',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·mapping_type·&amp;m)·noexcept'],
 77 ········['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx::basic_mdspan&lt;·ElementType,·Extents,·LayoutPolicy,·AccessorPolicy·&gt;'],
79 ········['../classgmx_1_1basic__mdspan.xhtml#a7c22975cf4760a9f66be3e20d83e1e39',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·std::array&lt;·ptrdiff_t,·extents_type::rank_dynamic()&gt;·&amp;dynamic_extents)'],78 ········['../classgmx_1_1basic__mdspan.xhtml#a7c22975cf4760a9f66be3e20d83e1e39',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·const·std::array&lt;·ptrdiff_t,·extents_type::rank_dynamic()&gt;·&amp;dynamic_extents)'],
80 ········['../classgmx_1_1basic__mdspan.xhtml#a1af35e8aadb8ddbe4a239879e3db6238',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan&lt;·OtherElementType,·OtherExtents,·OtherLayoutPolicy,·OtherAccessor·&gt;·&amp;rhs)·noexcept'], 
81 ········['../classgmx_1_1basic__mdspan.xhtml#af91e1c5db6aa3eb085defcaf777c6fd3',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·IndexType...·DynamicExtents)·noexcept'],79 ········['../classgmx_1_1basic__mdspan.xhtml#af91e1c5db6aa3eb085defcaf777c6fd3',·1,·'gmx::basic_mdspan::basic_mdspan(pointer·ptr,·IndexType...·DynamicExtents)·noexcept'],
82 ········['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx::basic_mdspan&lt;·ElementType,·Extents,·LayoutPolicy,·AccessorPolicy·&gt;']80 ········['../classgmx_1_1basic__mdspan.xhtml#a023bf1df41290714a1eb67ee9a952ef0',·1,·'gmx::basic_mdspan::basic_mdspan()·noexcept'],
 81 ········['../classgmx_1_1basic__mdspan.xhtml#aee5fbcbcd53cd39660f4a224aa28055b',·1,·'gmx::basic_mdspan::basic_mdspan(basic_mdspan·&amp;&amp;other)·noexcept=default'],
 82 ········['../classgmx_1_1basic__mdspan.xhtml#a3fb425dfe9f5d47d8575a3a5ffe15356',·1,·'gmx::basic_mdspan::basic_mdspan(const·basic_mdspan·&amp;other)·noexcept=default']
83 ····]],83 ····]],
84 ····['basic_5fmdspan_3c_20value_5ftype_2c_20dynamic_5fextents_5ftype_2c_20layout_5fright_20_3e_33',·['basic_mdspan&lt;·value_type,·dynamic_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],84 ····['basic_5fmdspan_3c_20value_5ftype_2c_20dynamic_5fextents_5ftype_2c_20layout_5fright_20_3e_33',·['basic_mdspan&lt;·value_type,·dynamic_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
85 ····['basic_5fmdspan_3c_20value_5ftype_2c_20extents_2c_20layout_5fright_20_3e_34',·['basic_mdspan&lt;·value_type,·Extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],85 ····['basic_5fmdspan_3c_20value_5ftype_2c_20extents_2c_20layout_5fright_20_3e_34',·['basic_mdspan&lt;·value_type,·Extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
86 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_2c_20layout_5fright_20_3e_35',·['basic_mdspan&lt;·value_type,·gmx::extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],86 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_2c_20layout_5fright_20_3e_35',·['basic_mdspan&lt;·value_type,·gmx::extents,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
87 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_204_2c_203_20_3e_2c_20layout_5fright_20_3e_36',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·4,·3·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],87 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_204_2c_203_20_3e_2c_20layout_5fright_20_3e_36',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·4,·3·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
88 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_20dynamic_5fextent_2c_20dynamic_5fextent_20_3e_2c_20layout_5fright_20_3e_37',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·dynamic_extent,·dynamic_extent·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],88 ····['basic_5fmdspan_3c_20value_5ftype_2c_20gmx_3a_3aextents_3c_20dynamic_5fextent_2c_20dynamic_5fextent_20_3e_2c_20layout_5fright_20_3e_37',·['basic_mdspan&lt;·value_type,·gmx::extents&lt;·dynamic_extent,·dynamic_extent·&gt;,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
89 ····['basic_5fmdspan_3c_20value_5ftype_2c_20static_5fextents_5ftype_2c_20layout_5fright_20_3e_38',·['basic_mdspan&lt;·value_type,·static_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],89 ····['basic_5fmdspan_3c_20value_5ftype_2c_20static_5fextents_5ftype_2c_20layout_5fright_20_3e_38',·['basic_mdspan&lt;·value_type,·static_extents_type,·layout_right·&gt;',·['../classgmx_1_1basic__mdspan.xhtml',·1,·'gmx']]],
90 ····['basicaveragehistogrammodule_39',·['basicaveragehistogrammodule',·['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml',·1,·'gmx::internal::BasicAverageHistogramModule'],90 ····['basicaveragehistogrammodule_39',·['basicaveragehistogrammodule',·['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml',·1,·'gmx::internal::BasicAverageHistogramModule'],
91 ········['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml#a54f473e0e65a37bafd96e64187ff3737',·1,·'gmx::internal::BasicAverageHistogramModule::BasicAverageHistogramModule()']91 ········['../classgmx_1_1internal_1_1BasicAverageHistogramModule.xhtml#a54f473e0e65a37bafd96e64187ff3737',·1,·'gmx::internal::BasicAverageHistogramModule::BasicAverageHistogramModule()']
92 ····]],92 ····]],
93 ····['basicaveragehistogrammodulepointer_40',·['BasicAverageHistogramModulePointer',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#a5339c7bb7559827e38bb63f8d824a276',·1,·'gmx::internal::BasicHistogramImpl']]],93 ····['basicaveragehistogrammodulepointer_40',·['BasicAverageHistogramModulePointer',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#a5339c7bb7559827e38bb63f8d824a276',·1,·'gmx::internal::BasicHistogramImpl']]],
 94 ····['basichistogramimpl_41',·['basichistogramimpl',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml',·1,·'gmx::internal::BasicHistogramImpl'],
94 ····['basichistogramimpl_41',·['basichistogramimpl',·['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#acd3fd16453a6ce448dc27f6be4d29c69',·1,·'gmx::internal::BasicHistogramImpl::BasicHistogramImpl()'],95 ········['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml#acd3fd16453a6ce448dc27f6be4d29c69',·1,·'gmx::internal::BasicHistogramImpl::BasicHistogramImpl()']
95 ········['../classgmx_1_1internal_1_1BasicHistogramImpl.xhtml',·1,·'gmx::internal::BasicHistogramImpl'] 
96 ····]],96 ····]],
97 ····['basicmatrix3x3_42',·['BasicMatrix3x3',·['../namespacegmx.xhtml#a6ec53a17a29b3d233fdfbdc4e273d08d',·1,·'gmx']]],97 ····['basicmatrix3x3_42',·['BasicMatrix3x3',·['../namespacegmx.xhtml#a6ec53a17a29b3d233fdfbdc4e273d08d',·1,·'gmx']]],
98 ····['basicoptions_2ecpp_43',·['basicoptions.cpp',·['../basicoptions_8cpp.xhtml',·1,·'']]],98 ····['basicoptions_2ecpp_43',·['basicoptions.cpp',·['../basicoptions_8cpp.xhtml',·1,·'']]],
99 ····['basicoptions_2eh_44',·['basicoptions.h',·['../basicoptions_8h.xhtml',·1,·'']]],99 ····['basicoptions_2eh_44',·['basicoptions.h',·['../basicoptions_8h.xhtml',·1,·'']]],
100 ····['basicoptionstorage_2eh_45',·['basicoptionstorage.h',·['../basicoptionstorage_8h.xhtml',·1,·'']]],100 ····['basicoptionstorage_2eh_45',·['basicoptionstorage.h',·['../basicoptionstorage_8h.xhtml',·1,·'']]],
101 ····['basictest_46',·['basicTest',·['../classgmx_1_1test_1_1TrajectoryFrameWriterTest.xhtml#af60c02f3ca19494613898ebe603da1b0',·1,·'gmx::test::TrajectoryFrameWriterTest']]],101 ····['basictest_46',·['basicTest',·['../classgmx_1_1test_1_1TrajectoryFrameWriterTest.xhtml#af60c02f3ca19494613898ebe603da1b0',·1,·'gmx::test::TrajectoryFrameWriterTest']]],
102 ····['basicvector_47',·['basicvector',·['../classgmx_1_1BasicVector.xhtml#a69359bc6b4f977a9e8f4dc671850fa36',·1,·'gmx::BasicVector::BasicVector(const·RawArray·x)'],102 ····['basicvector_47',·['basicvector',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx::BasicVector&lt;·ValueType·&gt;'],
103 ········['../classgmx_1_1BasicVector.xhtml#a0770c51feab30c509deb6d9596222fb5',·1,·'gmx::BasicVector::BasicVector()'],103 ········['../classgmx_1_1BasicVector.xhtml#a0770c51feab30c509deb6d9596222fb5',·1,·'gmx::BasicVector::BasicVector()'],
104 ········['../classgmx_1_1BasicVector.xhtml#a35f9473fbd9dbc5122c077913b768309',·1,·'gmx::BasicVector::BasicVector(ValueType·x,·ValueType·y,·ValueType·z)'],104 ········['../classgmx_1_1BasicVector.xhtml#a35f9473fbd9dbc5122c077913b768309',·1,·'gmx::BasicVector::BasicVector(ValueType·x,·ValueType·y,·ValueType·z)'],
105 ········['../classgmx_1_1BasicVector.xhtml',·1,·'gmx::BasicVector&lt;·ValueType·&gt;'],105 ········['../classgmx_1_1BasicVector.xhtml#a69359bc6b4f977a9e8f4dc671850fa36',·1,·'gmx::BasicVector::BasicVector(const·RawArray·x)'],
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106 ········['../classgmx_1_1BasicVector.xhtml#a1e948305d75e44763895cb2798d8a8c1',·1,·'gmx::BasicVector::BasicVector(BasicVector·&amp;&amp;src)·noexcept=default'],107 ········['../classgmx_1_1BasicVector.xhtml#a1e948305d75e44763895cb2798d8a8c1',·1,·'gmx::BasicVector::BasicVector(BasicVector·&amp;&amp;src)·noexcept=default']
107 ········['../classgmx_1_1BasicVector.xhtml#a9fc3a859d4ec7431af1481d2b4f4dfe9',·1,·'gmx::BasicVector::BasicVector(const·BasicVector·&amp;src)=default'] 
108 ····]],108 ····]],
109 ····['basicvector_3c_20double_20_3e_48',·['BasicVector&lt;·double·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],109 ····['basicvector_3c_20double_20_3e_48',·['BasicVector&lt;·double·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],
110 ····['basicvector_3c_20int_20_3e_49',·['BasicVector&lt;·int·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],110 ····['basicvector_3c_20int_20_3e_49',·['BasicVector&lt;·int·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],
111 ····['basicvector_3c_20real_20_3e_50',·['BasicVector&lt;·real·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],111 ····['basicvector_3c_20real_20_3e_50',·['BasicVector&lt;·real·&gt;',·['../classgmx_1_1BasicVector.xhtml',·1,·'gmx']]],
112 ····['bauto_51',·['bAuto',·['../structUmbrellaOptions.xhtml#a495f27b8e9cfb0ac6aa0c5a650eb54a6',·1,·'UmbrellaOptions']]],112 ····['bauto_51',·['bAuto',·['../structUmbrellaOptions.xhtml#a495f27b8e9cfb0ac6aa0c5a650eb54a6',·1,·'UmbrellaOptions']]],
113 ····['bb_52',·['bb',·['../structgmx_1_1NbnxmPairlistCpuWork_1_1IClusterData.xhtml#a35b8fb203eeea712d485996bfd285185',·1,·'gmx::NbnxmPairlistCpuWork::IClusterData']]],113 ····['bb_52',·['bb',·['../structgmx_1_1NbnxmPairlistCpuWork_1_1IClusterData.xhtml#a35b8fb203eeea712d485996bfd285185',·1,·'gmx::NbnxmPairlistCpuWork::IClusterData']]],
114 ····['bboolno_53',·['bBoolNo',·['../structgmx__sel__lexer__t.xhtml#a51c1565a9c7e67f715d28109b6a91489',·1,·'gmx_sel_lexer_t']]],114 ····['bboolno_53',·['bBoolNo',·['../structgmx__sel__lexer__t.xhtml#a51c1565a9c7e67f715d28109b6a91489',·1,·'gmx_sel_lexer_t']]],
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129 ····['bdataproperty_5f_68',·['bDataProperty_',·['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#a12b9fab82a72fdb6d521944c6fab4eab',·1,·'gmx::AnalysisDataModuleManager::Impl']]],129 ····['bdataproperty_5f_68',·['bDataProperty_',·['../classgmx_1_1AnalysisDataModuleManager_1_1Impl.xhtml#a12b9fab82a72fdb6d521944c6fab4eab',·1,·'gmx::AnalysisDataModuleManager::Impl']]],
130 ····['bdebugmode_69',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]],130 ····['bdebugmode_69',·['bDebugMode',·['../fatalerror_8h.xhtml#aeceaa87707ac5c2c96e224de90dd481c',·1,·'fatalerror.cpp']]],
131 ····['bdiscrete_70',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]],131 ····['bdiscrete_70',·['bDiscrete',·['../structt__matrix.xhtml#a6ca5a8d5f5d4be235502f83ffac2586c',·1,·'t_matrix']]],
132 ····['bdotime_71',·['bDoTime',·['../structgmx_1_1NbnxmGpu.xhtml#a3d617d678246cce64ceda64d6358cc0c',·1,·'gmx::NbnxmGpu']]],132 ····['bdotime_71',·['bDoTime',·['../structgmx_1_1NbnxmGpu.xhtml#a3d617d678246cce64ceda64d6358cc0c',·1,·'gmx::NbnxmGpu']]],
133 ····['bdynamicbox_72',·['bDynamicBox',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#afaf048710cbf2887f36a734d8707078f',·1,·'gmx::nbnxn_atomdata_t']]],133 ····['bdynamicbox_72',·['bDynamicBox',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#afaf048710cbf2887f36a734d8707078f',·1,·'gmx::nbnxn_atomdata_t']]],
134 ····['becool_73',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]],134 ····['becool_73',·['beCool',·['../namespacegmx_1_1anonymous__namespace_02coolstuff_8cpp_03.xhtml#a67229d8062fb466b5be7cb8bed125f1a',·1,·'gmx::anonymous_namespace{coolstuff.cpp}']]],
135 ····['begin_74',·['begin',·['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'],135 ····['begin_74',·['begin',·['../classgmx_1_1ArrayRef.xhtml#a52348f625a07e17a873cf943882510f9',·1,·'gmx::ArrayRef::begin()'],
136 ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'], 
137 ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin(MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'], 
138 ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin(const·BasicMdspan·&amp;basicMdspan)'], 
139 ········['../classgmx_1_1Range.xhtml#a242b3517477cdd07a73a702f360f5b46',·1,·'gmx::Range::begin()'], 
140 ········['../structgmx_1_1EnumerationArray.xhtml#a4a2f5be2695dfa8cbac551742c15d771',·1,·'gmx::EnumerationArray::begin()'], 
141 ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()'],136 ········['../classgmx_1_1EnergyTerm.xhtml#a4b930e14cacc91c16a0c6e59fb48ea58',·1,·'gmx::EnergyTerm::begin()'],
142 ········['../classgmx_1_1IntegerBox.xhtml#a4bdda1928d7845c8e5c5c3ef2918a466',·1,·'gmx::IntegerBox::begin()'],137 ········['../classgmx_1_1IntegerBox.xhtml#a4bdda1928d7845c8e5c5c3ef2918a466',·1,·'gmx::IntegerBox::begin()'],
143 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'],138 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#ab4801001dba830e69c9984d97e9c4932',·1,·'gmx::internal::SimdArrayRef::begin()'],
144 ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()'],139 ········['../classAtomRange.xhtml#afc17642be8cc592f6f47fdd9d86aa408',·1,·'AtomRange::begin()'],
145 ········['../classIListRange.xhtml#a7526befe10a07f17dbc35e704d01aeea',·1,·'IListRange::begin()'],140 ········['../classIListRange.xhtml#a7526befe10a07f17dbc35e704d01aeea',·1,·'IListRange::begin()'],
146 ········['../classgmx_1_1EnergyFrame.xhtml#a8c6171058dd1a26721f4af8df12b7a10',·1,·'gmx::EnergyFrame::begin()'],141 ········['../classgmx_1_1EnergyFrame.xhtml#a8c6171058dd1a26721f4af8df12b7a10',·1,·'gmx::EnergyFrame::begin()'],
147 ········['../classgmx_1_1FixedCapacityVector.xhtml#a93f0ea6236ab2cc8e924025646f8d87b',·1,·'gmx::FixedCapacityVector::begin()·const·noexcept'],142 ········['../classgmx_1_1FixedCapacityVector.xhtml#a93f0ea6236ab2cc8e924025646f8d87b',·1,·'gmx::FixedCapacityVector::begin()·const·noexcept'],
148 ········['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()·noexcept'],143 ········['../classgmx_1_1FixedCapacityVector.xhtml#a453e4185086abe32f76359d79e5df439',·1,·'gmx::FixedCapacityVector::begin()·noexcept'],
 144 ········['../namespacegmx.xhtml#a9fd99e24e163158545296b3f791b0ee8',·1,·'gmx::begin()'],
149 ········['../classgmx_1_1EnumerationWrapper.xhtml#abf496f9dcaab55be1b9cbe93f05312d9',·1,·'gmx::EnumerationWrapper::begin()']145 ········['../classgmx_1_1EnumerationWrapper.xhtml#abf496f9dcaab55be1b9cbe93f05312d9',·1,·'gmx::EnumerationWrapper::begin()'],
 146 ········['../structgmx_1_1EnumerationArray.xhtml#a4a2f5be2695dfa8cbac551742c15d771',·1,·'gmx::EnumerationArray::begin()'],
 147 ········['../classgmx_1_1Range.xhtml#a242b3517477cdd07a73a702f360f5b46',·1,·'gmx::Range::begin()'],
 148 ········['../namespacegmx.xhtml#aaf0716c8ca857b1a8877fc94463b5850',·1,·'gmx::begin(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'],
 149 ········['../namespacegmx.xhtml#a636719700df07fe8736fa19bb12c29dd',·1,·'gmx::begin(MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)']
150 ····]],150 ····]],
151 ····['begin_5faction_75',·['BEGIN_ACTION',·['../parser__internal_8h.xhtml#adc0616ed62829750149da924ee4176a9',·1,·'parser_internal.h']]],151 ····['begin_5faction_75',·['BEGIN_ACTION',·['../parser__internal_8h.xhtml#adc0616ed62829750149da924ee4176a9',·1,·'parser_internal.h']]],
152 ····['beginiterator_76',·['beginIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#a6301d2be458f368de68f404d9dff17f7',·1,·'gmx::SelectionParserSymbolTable']]],152 ····['beginiterator_76',·['beginIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#a6301d2be458f368de68f404d9dff17f7',·1,·'gmx::SelectionParserSymbolTable']]],
153 ····['behaviorcollection_2ecpp_77',·['behaviorcollection.cpp',·['../behaviorcollection_8cpp.xhtml',·1,·'']]],153 ····['behaviorcollection_2ecpp_77',·['behaviorcollection.cpp',·['../behaviorcollection_8cpp.xhtml',·1,·'']]],
154 ····['behaviorcollection_2eh_78',·['behaviorcollection.h',·['../behaviorcollection_8h.xhtml',·1,·'']]],154 ····['behaviorcollection_2eh_78',·['behaviorcollection.h',·['../behaviorcollection_8h.xhtml',·1,·'']]],
155 ····['bench_79',·['bench',·['../namespacegmx.xhtml#a7b53184fadd094f5c7ac05ba75d70cef',·1,·'gmx']]],155 ····['bench_79',·['bench',·['../namespacegmx.xhtml#a7b53184fadd094f5c7ac05ba75d70cef',·1,·'gmx']]],
156 ····['bench_5fcoords_2eh_80',·['bench_coords.h',·['../bench__coords_8h.xhtml',·1,·'']]],156 ····['bench_5fcoords_2eh_80',·['bench_coords.h',·['../bench__coords_8h.xhtml',·1,·'']]],
Offset 434, 16 lines modifiedOffset 434, 16 lines modified
434 ····['boxutilities_2ecpp_280',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]],434 ····['boxutilities_2ecpp_280',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]],
435 ····['boxv_281',·['boxv',·['../structgmx_1_1PTCouplingArrays.xhtml#a4c2d1a71d37029718be8c54307162a06',·1,·'gmx::PTCouplingArrays::boxv'],435 ····['boxv_281',·['boxv',·['../structgmx_1_1PTCouplingArrays.xhtml#a4c2d1a71d37029718be8c54307162a06',·1,·'gmx::PTCouplingArrays::boxv'],
436 ········['../classt__state.xhtml#a032e2e984b1748f12db76af1e28aced5',·1,·'t_state::boxv']436 ········['../classt__state.xhtml#a032e2e984b1748f12db76af1e28aced5',·1,·'t_state::boxv']
437 ····]],437 ····]],
438 ····['boxvelocities_282',·['boxvelocities',·['../classgmx_1_1MttkData.xhtml#a5b228254b0be438ac4acb297bb84b8c6',·1,·'gmx::MttkData::boxVelocities()'],438 ····['boxvelocities_282',·['boxvelocities',·['../classgmx_1_1MttkData.xhtml#a5b228254b0be438ac4acb297bb84b8c6',·1,·'gmx::MttkData::boxVelocities()'],
439 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a3c571c0a321a5d2933c16202be603609',·1,·'gmx::ParrinelloRahmanBarostat::boxVelocities()']439 ········['../classgmx_1_1ParrinelloRahmanBarostat.xhtml#a3c571c0a321a5d2933c16202be603609',·1,·'gmx::ParrinelloRahmanBarostat::boxVelocities()']
440 ····]],440 ····]],
441 ····['boxvolume_283',·['boxvolume',·['../structSolveKernelParams.xhtml#a5e8afcfd4d7b88917cde0cc236a92309',·1,·'SolveKernelParams::boxVolume'], 
442 ········['../structPmeGpuDynamicParams.xhtml#adf60ffcfa3c2c87c9cd38e5365b27a20',·1,·'PmeGpuDynamicParams::boxVolume']441 ····['boxvolume_283',·['boxvolume',·['../structPmeGpuDynamicParams.xhtml#adf60ffcfa3c2c87c9cd38e5365b27a20',·1,·'PmeGpuDynamicParams::boxVolume'],
 442 ········['../structSolveKernelParams.xhtml#a5e8afcfd4d7b88917cde0cc236a92309',·1,·'SolveKernelParams::boxVolume']
443 ····]],443 ····]],
444 ····['boxxx_284',·['boxXX',·['../structPbcAiuc.xhtml#af4ecbce3844b3a0fe21687cc2190901a',·1,·'PbcAiuc']]],444 ····['boxxx_284',·['boxXX',·['../structPbcAiuc.xhtml#af4ecbce3844b3a0fe21687cc2190901a',·1,·'PbcAiuc']]],
445 ····['boxyx_285',·['boxYX',·['../structPbcAiuc.xhtml#afc5bf808bc74fe927d6cf0268263dc30',·1,·'PbcAiuc']]],445 ····['boxyx_285',·['boxYX',·['../structPbcAiuc.xhtml#afc5bf808bc74fe927d6cf0268263dc30',·1,·'PbcAiuc']]],
446 ····['boxyy_286',·['boxYY',·['../structPbcAiuc.xhtml#a38f559419387b5aede8ff8c38a5ce44b',·1,·'PbcAiuc']]],446 ····['boxyy_286',·['boxYY',·['../structPbcAiuc.xhtml#a38f559419387b5aede8ff8c38a5ce44b',·1,·'PbcAiuc']]],
447 ····['boxzx_287',·['boxZX',·['../structPbcAiuc.xhtml#a81d695f0aacdc48f8c4817ef54cab494',·1,·'PbcAiuc']]],447 ····['boxzx_287',·['boxZX',·['../structPbcAiuc.xhtml#a81d695f0aacdc48f8c4817ef54cab494',·1,·'PbcAiuc']]],
448 ····['boxzy_288',·['boxZY',·['../structPbcAiuc.xhtml#a994062b0c308f30a31c0d29e35ea27e3',·1,·'PbcAiuc']]],448 ····['boxzy_288',·['boxZY',·['../structPbcAiuc.xhtml#a994062b0c308f30a31c0d29e35ea27e3',·1,·'PbcAiuc']]],
449 ····['boxzz_289',·['boxZZ',·['../structPbcAiuc.xhtml#ae9e369adfc2110366224ec91b05de2fd',·1,·'PbcAiuc']]],449 ····['boxzz_289',·['boxZZ',·['../structPbcAiuc.xhtml#ae9e369adfc2110366224ec91b05de2fd',·1,·'PbcAiuc']]],
Offset 496, 45 lines modifiedOffset 496, 45 lines modified
496 ····['btaskdep_330',·['bTaskDep',·['../classgmx_1_1Lincs.xhtml#a7b6edf63690018fde9156adca635ae4a',·1,·'gmx::Lincs']]],496 ····['btaskdep_330',·['bTaskDep',·['../classgmx_1_1Lincs.xhtml#a7b6edf63690018fde9156adca635ae4a',·1,·'gmx::Lincs']]],
497 ····['btaskdeptri_331',·['bTaskDepTri',·['../classgmx_1_1Lincs.xhtml#a3f08edf4cf895f4768fe46f74abd7ed7',·1,·'gmx::Lincs']]],497 ····['btaskdeptri_331',·['bTaskDepTri',·['../classgmx_1_1Lincs.xhtml#a3f08edf4cf895f4768fe46f74abd7ed7',·1,·'gmx::Lincs']]],
498 ····['bterminatable_332',·['bTerminatable',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#ab42bd4b673638392a018e930a4b92b93',·1,·'gmx::ImdSession::Impl']]],498 ····['bterminatable_332',·['bTerminatable',·['../classgmx_1_1ImdSession_1_1Impl.xhtml#ab42bd4b673638392a018e930a4b92b93',·1,·'gmx::ImdSession::Impl']]],
499 ····['btime_5funused_333',·['btime_UNUSED',·['../structCheckpointHeaderContents.xhtml#af8e14457d8c8abfb6aaa0b814f7a6e25',·1,·'CheckpointHeaderContents']]],499 ····['btime_5funused_333',·['btime_UNUSED',·['../structCheckpointHeaderContents.xhtml#af8e14457d8c8abfb6aaa0b814f7a6e25',·1,·'CheckpointHeaderContents']]],
500 ····['btop_334',·['bTop',·['../structTpxFileHeader.xhtml#a6ba88c0a16b04768e9ada01b06f699bd',·1,·'TpxFileHeader']]],500 ····['btop_334',·['bTop',·['../structTpxFileHeader.xhtml#a6ba88c0a16b04768e9ada01b06f699bd',·1,·'TpxFileHeader']]],
501 ····['bucket_5fcount_335',·['bucket_count',·['../classgmx_1_1HashedMap.xhtml#a5bca3de288135bcd8d9e6294591294df',·1,·'gmx::HashedMap']]],501 ····['bucket_5fcount_335',·['bucket_count',·['../classgmx_1_1HashedMap.xhtml#a5bca3de288135bcd8d9e6294591294df',·1,·'gmx::HashedMap']]],
502 ····['buf_336',·['buf',·['../structt__symbuf.xhtml#af5e12357ba1aa1677d365ff5a8dc5e77',·1,·'t_symbuf']]],502 ····['buf_336',·['buf',·['../structt__symbuf.xhtml#af5e12357ba1aa1677d365ff5a8dc5e77',·1,·'t_symbuf']]],
 503 ····['buffer_337',·['buffer',·['../structgmx__sel__lexer__t.xhtml#a705f00803cda152ad8a26aebda19b2c2',·1,·'gmx_sel_lexer_t::buffer'],
503 ····['buffer_337',·['buffer',·['../structgmx__sel__mempool__t.xhtml#a27639e0126ed758352f20b27e9db9507',·1,·'gmx_sel_mempool_t::buffer'],504 ········['../structgmx__sel__mempool__t.xhtml#a27639e0126ed758352f20b27e9db9507',·1,·'gmx_sel_mempool_t::buffer']
504 ········['../structgmx__sel__lexer__t.xhtml#a705f00803cda152ad8a26aebda19b2c2',·1,·'gmx_sel_lexer_t::buffer'] 
505 ····]],505 ····]],
506 ····['buffer_5fflags_338',·['buffer_flags',·['../structgmx_1_1PairsearchWork.xhtml#a44df785724e35dbe7e4b4fabe863e052',·1,·'gmx::PairsearchWork']]],506 ····['buffer_5fflags_338',·['buffer_flags',·['../structgmx_1_1PairsearchWork.xhtml#a44df785724e35dbe7e4b4fabe863e052',·1,·'gmx::PairsearchWork']]],
507 ····['bufferflags_339',·['bufferFlags',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#a06eaf8b9d41d052958e48e5fe9cd8afb',·1,·'gmx::nbnxn_atomdata_t']]],507 ····['bufferflags_339',·['bufferFlags',·['../structgmx_1_1nbnxn__atomdata__t.xhtml#a06eaf8b9d41d052958e48e5fe9cd8afb',·1,·'gmx::nbnxn_atomdata_t']]],
508 ····['bufferptr_340',·['bufferPtr',·['../structSystemMomentum.xhtml#a282ccc7c09a751b66ed1ab97acaaacbb',·1,·'SystemMomentum']]],508 ····['bufferptr_340',·['bufferPtr',·['../structSystemMomentum.xhtml#a282ccc7c09a751b66ed1ab97acaaacbb',·1,·'SystemMomentum']]],
 509 ····['bufsize_341',·['bufsize',·['../structt__symbuf.xhtml#aa8f31f81bf5b1bf0ef41b4e0f9e9ec11',·1,·'t_symbuf::bufsize'],
509 ····['bufsize_341',·['bufsize',·['../structgmx__enfrot.xhtml#a7b99109d5925ba567701673220ad1aef',·1,·'gmx_enfrot::bufsize'],510 ········['../structgmx__enfrot.xhtml#a7b99109d5925ba567701673220ad1aef',·1,·'gmx_enfrot::bufsize']
510 ········['../structt__symbuf.xhtml#aa8f31f81bf5b1bf0ef41b4e0f9e9ec11',·1,·'t_symbuf::bufsize'] 
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144 ····['c_5fnbnxnlistsizefactorgpu_113',·['c_nbnxnListSizeFactorGPU',·['../namespacegmx.xhtml#af6d5e72407fa960b131ac2b97cc5c1ef',·1,·'gmx']]],144 ····['c_5fnbnxnlistsizefactorgpu_113',·['c_nbnxnListSizeFactorGPU',·['../namespacegmx.xhtml#af6d5e72407fa960b131ac2b97cc5c1ef',·1,·'gmx']]],
145 ····['c_5fnbnxnlistsizefactorintelxeonphi_114',·['c_nbnxnListSizeFactorIntelXeonPhi',·['../namespacegmx.xhtml#a66502134e5eb3aeccaa92d5fd5c3107d',·1,·'gmx']]],145 ····['c_5fnbnxnlistsizefactorintelxeonphi_114',·['c_nbnxnListSizeFactorIntelXeonPhi',·['../namespacegmx.xhtml#a66502134e5eb3aeccaa92d5fd5c3107d',·1,·'gmx']]],
146 ····['c_5fnbnxnlistsizefactormargin_115',·['c_nbnxnListSizeFactorMargin',·['../namespacegmx.xhtml#a5a22f8b4faac5d466c4f02b158b5a361',·1,·'gmx']]],146 ····['c_5fnbnxnlistsizefactormargin_115',·['c_nbnxnListSizeFactorMargin',·['../namespacegmx.xhtml#a5a22f8b4faac5d466c4f02b158b5a361',·1,·'gmx']]],
147 ····['c_5fnbnxnmindistancesquared_116',·['c_nbnxnMinDistanceSquared',·['../namespacegmx.xhtml#a7ecc092df63d887998b03ebf9b041fee',·1,·'gmx']]],147 ····['c_5fnbnxnmindistancesquared_116',·['c_nbnxnMinDistanceSquared',·['../namespacegmx.xhtml#a7ecc092df63d887998b03ebf9b041fee',·1,·'gmx']]],
148 ····['c_5fnmtomrcunits_117',·['c_nmToMrcUnits',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a084c836f7f75cc97b5c92d3fa400dc70',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],148 ····['c_5fnmtomrcunits_117',·['c_nmToMrcUnits',·['../namespacegmx_1_1anonymous__namespace_02mrcserializer_8cpp_03.xhtml#a084c836f7f75cc97b5c92d3fa400dc70',·1,·'gmx::anonymous_namespace{mrcserializer.cpp}']]],
149 ····['c_5fnnpotmodulename_118',·['c_nnpotModuleName',·['../namespacegmx.xhtml#a29db5676487ac7189bbe96691b95cc6d',·1,·'gmx']]],149 ····['c_5fnnpotmodulename_118',·['c_nnpotModuleName',·['../namespacegmx.xhtml#a29db5676487ac7189bbe96691b95cc6d',·1,·'gmx']]],
150 ····['c_5fnormalizationnames_119',·['c_normalizationNames',·['../group__module__trajectoryanalysis.xhtml#gafe9e3ae6c83f2aeb21e0ad8841e3b0e2',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]],150 ····['c_5fnormalizationnames_119',·['c_normalizationNames',·['../group__module__trajectoryanalysis.xhtml#gafe9e3ae6c83f2aeb21e0ad8841e3b0e2',·1,·'gmx::analysismodules::anonymous_namespace{rdf.cpp}']]],
151 ····['c_5fnumatoms_120',·['c_numatoms',·['../namespacegmx_1_1test_1_1anonymous__namespace_02wholemoleculetransform_8cpp_03.xhtml#a4a0a79bb04de0656b32b35e3d13fac9c',·1,·'gmx::test::anonymous_namespace{wholemoleculetransform.cpp}::c_numAtoms'],151 ····['c_5fnumatoms_120',·['c_numatoms',·['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a60f4b0f65ad59fda745897b8764dae0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_numAtoms'],
152 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#ab0d16511710d3d446c4ebe139a1a93d8',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::c_numAtoms'],152 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#ab0d16511710d3d446c4ebe139a1a93d8',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::c_numAtoms'],
153 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02bonded_8cpp_03.xhtml#a60f4b0f65ad59fda745897b8764dae0a',·1,·'gmx::test::anonymous_namespace{bonded.cpp}::c_numAtoms'],153 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02wholemoleculetransform_8cpp_03.xhtml#a4a0a79bb04de0656b32b35e3d13fac9c',·1,·'gmx::test::anonymous_namespace{wholemoleculetransform.cpp}::c_numAtoms'],
154 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02nb__free__energy_8cpp_03.xhtml#a9e6451d690e56d5db0395022cefa888c',·1,·'gmx::test::anonymous_namespace{nb_free_energy.cpp}::c_numAtoms']154 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02nb__free__energy_8cpp_03.xhtml#a9e6451d690e56d5db0395022cefa888c',·1,·'gmx::test::anonymous_namespace{nb_free_energy.cpp}::c_numAtoms']
155 ····]],155 ····]],
156 ····['c_5fnumbonds_121',·['c_numBonds',·['../namespacegmx_1_1test_1_1anonymous__namespace_02wholemoleculetransform_8cpp_03.xhtml#ae110a0f5e65d4f5cf02206f0df72a038',·1,·'gmx::test::anonymous_namespace{wholemoleculetransform.cpp}']]],156 ····['c_5fnumbonds_121',·['c_numBonds',·['../namespacegmx_1_1test_1_1anonymous__namespace_02wholemoleculetransform_8cpp_03.xhtml#ae110a0f5e65d4f5cf02206f0df72a038',·1,·'gmx::test::anonymous_namespace{wholemoleculetransform.cpp}']]],
157 ····['c_5fnumboundingboxbounds1d_122',·['c_numBoundingBoxBounds1D',·['../namespacegmx.xhtml#a991d17595deb2abcd922d96aec69d1db',·1,·'gmx']]],157 ····['c_5fnumboundingboxbounds1d_122',·['c_numBoundingBoxBounds1D',·['../namespacegmx.xhtml#a991d17595deb2abcd922d96aec69d1db',·1,·'gmx']]],
158 ····['c_5fnumcorrelationblocks_123',·['c_numCorrelationBlocks',·['../classgmx_1_1CorrelationTensor.xhtml#a3bacb906f9931328bddd22c8e218c9d4',·1,·'gmx::CorrelationTensor']]],158 ····['c_5fnumcorrelationblocks_123',·['c_numCorrelationBlocks',·['../classgmx_1_1CorrelationTensor.xhtml#a3bacb906f9931328bddd22c8e218c9d4',·1,·'gmx::CorrelationTensor']]],
159 ····['c_5fnumeigenrealsperexperiment_124',·['c_numEigenRealsPerExperiment',·['../structt__oriresdata.xhtml#a19c8ceb03fed76dc54909c852ea83321',·1,·'t_oriresdata']]],159 ····['c_5fnumeigenrealsperexperiment_124',·['c_numEigenRealsPerExperiment',·['../structt__oriresdata.xhtml#a19c8ceb03fed76dc54909c852ea83321',·1,·'t_oriresdata']]],
160 ····['c_5fnumelectypes_125',·['c_numElecTypes',·['../namespacegmx.xhtml#a3865067eb3fb992ca03ab7795d6fa30a',·1,·'gmx']]],160 ····['c_5fnumelectypes_125',·['c_numElecTypes',·['../namespacegmx.xhtml#a3865067eb3fb992ca03ab7795d6fa30a',·1,·'gmx']]],
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190 ····['c_5fqmmmcp2kmodulename_152',·['c_qmmmCP2KModuleName',·['../namespacegmx.xhtml#a2dc5d75b30933ef685d2af785d491f84',·1,·'gmx']]],190 ····['c_5fqmmmcp2kmodulename_152',·['c_qmmmCP2KModuleName',·['../namespacegmx.xhtml#a2dc5d75b30933ef685d2af785d491f84',·1,·'gmx']]],
191 ····['c_5fqmmmqmmethodnames_153',·['c_qmmmQMMethodNames',·['../namespacegmx.xhtml#afc6d6c1e63e76316db42e69f486d058f',·1,·'gmx']]],191 ····['c_5fqmmmqmmethodnames_153',·['c_qmmmQMMethodNames',·['../namespacegmx.xhtml#afc6d6c1e63e76316db42e69f486d058f',·1,·'gmx']]],
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534 ····['checkenergiesagainstreferencedata_402',·['checkenergiesagainstreferencedata',·['../namespacegmx_1_1test.xhtml#abcc471341e432bea98026181285e866d',·1,·'gmx::test::checkEnergiesAgainstReferenceData(const·std::string·&amp;energyFilename,·const·EnergyTermsToCompare·&amp;energyTermsToCompare,·TestReferenceChecker·*checker)'],534 ····['checkenergiesagainstreferencedata_402',·['checkenergiesagainstreferencedata',·['../namespacegmx_1_1test.xhtml#a2ef781eb5182de267fafe8ec325fd36e',·1,·'gmx::test::checkEnergiesAgainstReferenceData(const·std::string·&amp;energyFilename,·const·EnergyTermsToCompare·&amp;energyTermsToCompare,·TestReferenceChecker·*checker,·MaxNumFrames·maxNumEnergyFrames)'],
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538 ····['checkenergygroups_404',·['checkEnergyGroups',·['../classgmx_1_1TestParticleInsertion.xhtml#a35bb780b31122e7bc2a7a66c3385dadb',·1,·'gmx::TestParticleInsertion']]],538 ····['checkenergygroups_404',·['checkEnergyGroups',·['../classgmx_1_1TestParticleInsertion.xhtml#a35bb780b31122e7bc2a7a66c3385dadb',·1,·'gmx::TestParticleInsertion']]],
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540 ····['checkequalcaseinsensitive_406',·['checkEqualCaseInsensitive',·['../namespacegmx_1_1test_1_1anonymous__namespace_02stringutil_8cpp_03.xhtml#ac8f1f81f4e3436b8691a3238729715f6',·1,·'gmx::test::anonymous_namespace{stringutil.cpp}']]],540 ····['checkequalcaseinsensitive_406',·['checkEqualCaseInsensitive',·['../namespacegmx_1_1test_1_1anonymous__namespace_02stringutil_8cpp_03.xhtml#ac8f1f81f4e3436b8691a3238729715f6',·1,·'gmx::test::anonymous_namespace{stringutil.cpp}']]],
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560 ····['checkforunknownoptionsinkeyvaluetree_420',·['checkForUnknownOptionsInKeyValueTree',·['../group__module__options.xhtml#ga7c18bea4ebc5cb035834d3f117906952',·1,·'gmx']]],560 ····['checkforunknownoptionsinkeyvaluetree_420',·['checkForUnknownOptionsInKeyValueTree',·['../group__module__options.xhtml#ga7c18bea4ebc5cb035834d3f117906952',·1,·'gmx']]],
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597 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a8f6efb4f1b93d0ef5503066d1f8dafc0',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::checkOutput()']597 ········['../namespacegmx_1_1test_1_1anonymous__namespace_02pairs_8cpp_03.xhtml#a8f6efb4f1b93d0ef5503066d1f8dafc0',·1,·'gmx::test::anonymous_namespace{pairs.cpp}::checkOutput()']
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458 ····['densityfittingamplitudelookup_2eh_280',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],458 ····['densityfittingamplitudelookup_2eh_280',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],
459 ····['densityfittingamplitudemethod_281',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]],459 ····['densityfittingamplitudemethod_281',·['DensityFittingAmplitudeMethod',·['../namespacegmx.xhtml#ab0ad78613a262a1d4fcce5d18525099f',·1,·'gmx']]],
460 ····['densityfittingforce_282',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml',·1,·'gmx::DensityFittingForce'], 
461 ········['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&amp;kernelShapeParameters)'],460 ····['densityfittingforce_282',·['densityfittingforce',·['../classgmx_1_1DensityFittingForce.xhtml#acf7150b3a47e6878c27e70500c221d4a',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·GaussianSpreadKernelParameters::Shape·&amp;kernelShapeParameters)'],
462 ········['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&amp;other)'],461 ········['../classgmx_1_1DensityFittingForce.xhtml#a4515397cbc5ab594e8e9066302e02eca',·1,·'gmx::DensityFittingForce::DensityFittingForce(const·DensityFittingForce·&amp;other)'],
463 ········['../classgmx_1_1DensityFittingForce.xhtml#a3eab6d07afa82b211179207e74072ff0',·1,·'gmx::DensityFittingForce::DensityFittingForce(DensityFittingForce·&amp;&amp;other)·noexcept']462 ········['../classgmx_1_1DensityFittingForce.xhtml#a3eab6d07afa82b211179207e74072ff0',·1,·'gmx::DensityFittingForce::DensityFittingForce(DensityFittingForce·&amp;&amp;other)·noexcept'],
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464 ····]],464 ····]],
465 ····['densityfittingforce_2ecpp_283',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],465 ····['densityfittingforce_2ecpp_283',·['densityfittingforce.cpp',·['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],
466 ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']466 ········['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']
467 ····]],467 ····]],
468 ····['densityfittingforce_2eh_284',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],468 ····['densityfittingforce_2eh_284',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],
469 ····['densityfittingforceprovider_285',·['densityfittingforceprovider',·['../classgmx_1_1DensityFittingForceProvider.xhtml#a99f34ce28c7c4b269fe7b9cc0c61c255',·1,·'gmx::DensityFittingForceProvider::DensityFittingForceProvider()'],469 ····['densityfittingforceprovider_285',·['densityfittingforceprovider',·['../classgmx_1_1DensityFittingForceProvider.xhtml#a99f34ce28c7c4b269fe7b9cc0c61c255',·1,·'gmx::DensityFittingForceProvider::DensityFittingForceProvider()'],
470 ········['../classgmx_1_1DensityFittingForceProvider.xhtml',·1,·'gmx::DensityFittingForceProvider']470 ········['../classgmx_1_1DensityFittingForceProvider.xhtml',·1,·'gmx::DensityFittingForceProvider']
471 ····]],471 ····]],
472 ····['densityfittingforceprovider_2ecpp_286',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],472 ····['densityfittingforceprovider_2ecpp_286',·['densityfittingforceprovider.cpp',·['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
473 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']473 ········['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
474 ····]],474 ····]],
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476 ····['densityfittingforceproviderstate_288',·['DensityFittingForceProviderState',·['../structgmx_1_1DensityFittingForceProviderState.xhtml',·1,·'gmx']]],476 ····['densityfittingforceproviderstate_288',·['DensityFittingForceProviderState',·['../structgmx_1_1DensityFittingForceProviderState.xhtml',·1,·'gmx']]],
477 ····['densityfittingmdptransformfromstring_289',·['densityfittingMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02densityfittingoptions_8cpp_03.xhtml#ad01120df989f6892f2b3716de8220d89',·1,·'gmx::anonymous_namespace{densityfittingoptions.cpp}']]],477 ····['densityfittingmdptransformfromstring_289',·['densityfittingMdpTransformFromString',·['../namespacegmx_1_1anonymous__namespace_02densityfittingoptions_8cpp_03.xhtml#ad01120df989f6892f2b3716de8220d89',·1,·'gmx::anonymous_namespace{densityfittingoptions.cpp}']]],
478 ····['densityfittingmodule_2ecpp_290',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],478 ····['densityfittingmodule_2ecpp_290',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],
479 ····['densityfittingmoduleinfo_291',·['DensityFittingModuleInfo',·['../structgmx_1_1DensityFittingModuleInfo.xhtml',·1,·'gmx']]],479 ····['densityfittingmoduleinfo_291',·['DensityFittingModuleInfo',·['../structgmx_1_1DensityFittingModuleInfo.xhtml',·1,·'gmx']]],
480 ····['densityfittingoptions_292',·['DensityFittingOptions',·['../classgmx_1_1DensityFittingOptions.xhtml',·1,·'gmx']]],480 ····['densityfittingoptions_292',·['DensityFittingOptions',·['../classgmx_1_1DensityFittingOptions.xhtml',·1,·'gmx']]],
481 ····['densityfittingoptions_2ecpp_293',·['densityfittingoptions.cpp',·['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],481 ····['densityfittingoptions_2ecpp_293',·['densityfittingoptions.cpp',·['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
482 ········['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']482 ········['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
483 ····]],483 ····]],
484 ····['densityfittingoptions_2eh_294',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],484 ····['densityfittingoptions_2eh_294',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],
485 ····['densityfittingoutputprovider_295',·['DensityFittingOutputProvider',·['../classgmx_1_1DensityFittingOutputProvider.xhtml',·1,·'gmx']]],485 ····['densityfittingoutputprovider_295',·['DensityFittingOutputProvider',·['../classgmx_1_1DensityFittingOutputProvider.xhtml',·1,·'gmx']]],
486 ····['densityfittingoutputprovider_2ecpp_296',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],486 ····['densityfittingoutputprovider_2ecpp_296',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],
487 ····['densityfittingoutputprovider_2eh_297',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],487 ····['densityfittingoutputprovider_2eh_297',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],
488 ····['densityfittingparameters_298',·['DensityFittingParameters',·['../structgmx_1_1DensityFittingParameters.xhtml',·1,·'gmx']]],488 ····['densityfittingparameters_298',·['DensityFittingParameters',·['../structgmx_1_1DensityFittingParameters.xhtml',·1,·'gmx']]],
489 ····['densityfittingparameters_2eh_299',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],489 ····['densityfittingparameters_2eh_299',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],
490 ····['densityfittingsimulationparametersetup_300',·['DensityFittingSimulationParameterSetup',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}']]],490 ····['densityfittingsimulationparametersetup_300',·['DensityFittingSimulationParameterSetup',·['../classgmx_1_1anonymous__namespace_02densityfitting_8cpp_03_1_1DensityFittingSimulationParameterSetup.xhtml',·1,·'gmx::anonymous_namespace{densityfitting.cpp}']]],
491 ····['densityfittingtest_301',·['DensityFittingTest',·['../classgmx_1_1test_1_1DensityFittingTest.xhtml',·1,·'gmx::test']]],491 ····['densityfittingtest_301',·['DensityFittingTest',·['../classgmx_1_1test_1_1DensityFittingTest.xhtml',·1,·'gmx::test']]],
 492 ····['densitysimilaritycrosscorrelation_302',·['densitysimilaritycrosscorrelation',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation'],
492 ····['densitysimilaritycrosscorrelation_302',·['densitysimilaritycrosscorrelation',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml#a4ee22cb21ab72112c8abf3e587e5eccd',·1,·'gmx::anonymous_namespace{densityfi[·...·truncated·by·diffoscope;·len:·81,·SHA:·014519e78fcd7969236f2f618c096ee1ceacf702e82ff3007695f5d2ef07b30b·...·]493 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml#a4ee22cb21ab72112c8abf3e587e5eccd',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation::DensitySimilarityCrossCorrelation[·...·truncated·by·diffoscope;·len:·4,·SHA:·3b368f95cf200ac05f599bd35e89916c59b9417666bdba88747300c89e5ea5d4·...·]
493 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityCrossCorrelation.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityCrossCorrelation'] 
494 ····]],494 ····]],
495 ····['densitysimilarityinnerproduct_303',·['densitysimilarityinnerproduct',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml#a96f37a060eef783e6c336578c6b17ffa',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct::DensitySimilarityInnerProduct()'],495 ····['densitysimilarityinnerproduct_303',·['densitysimilarityinnerproduct',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml#a96f37a060eef783e6c336578c6b17ffa',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct::DensitySimilarityInnerProduct()'],
496 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct']496 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityInnerProduct.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityInnerProduct']
497 ····]],497 ····]],
 498 ····['densitysimilaritymeasure_304',·['densitysimilaritymeasure',·['../classgmx_1_1DensitySimilarityMeasure.xhtml',·1,·'gmx::DensitySimilarityMeasure'],
498 ····['densitysimilaritymeasure_304',·['densitysimilaritymeasure',·['../classgmx_1_1DensitySimilarityMeasure.xhtml#a188a695f4f6981e8e79736214b2dffed',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasureMethod·method,·density·referenceDensity)'],499 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#a188a695f4f6981e8e79736214b2dffed',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasureMethod·method,·density·referenceDensity)'],
 500 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#aa928209c9b6274f37b3feb27487982e0',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(const·DensitySimilarityMeasure·&amp;other)'],
499 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#af093604e59c0ae7d7a00cc06d254b7de',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasure·&amp;&amp;other)·noexcept'],501 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#af093604e59c0ae7d7a00cc06d254b7de',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure(DensitySimilarityMeasure·&amp;&amp;other)·noexcept']
500 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml',·1,·'gmx::DensitySimilarityMeasure'], 
501 ········['../classgmx_1_1DensitySimilarityMeasure.xhtml#aa928209c9b6274f37b3feb27487982e0',·1,·'gmx::DensitySimilarityMeasure::DensitySimilarityMeasure()'] 
502 ····]],502 ····]],
503 ····['densitysimilaritymeasuremethod_305',·['DensitySimilarityMeasureMethod',·['../namespacegmx.xhtml#a659cc27006f5ed7f2ecb076126f0857f',·1,·'gmx']]],503 ····['densitysimilaritymeasuremethod_305',·['DensitySimilarityMeasureMethod',·['../namespacegmx.xhtml#a659cc27006f5ed7f2ecb076126f0857f',·1,·'gmx']]],
504 ····['densitysimilarityrelativeentropy_306',·['densitysimilarityrelativeentropy',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml#a74837f6fde669bc6fb1acf9467aa6135',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy::DensitySimilarityRelativeEntropy()'],504 ····['densitysimilarityrelativeentropy_306',·['densitysimilarityrelativeentropy',·['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml#a74837f6fde669bc6fb1acf9467aa6135',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy::DensitySimilarityRelativeEntropy()'],
505 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy']505 ········['../classgmx_1_1anonymous__namespace_02densityfit_8cpp_03_1_1DensitySimilarityRelativeEntropy.xhtml',·1,·'gmx::anonymous_namespace{densityfit.cpp}::DensitySimilarityRelativeEntropy']
506 ····]],506 ····]],
507 ····['dependency_20graph_307',·['Module·dependency·graph',·['../page_modulegraph.xhtml',·1,·'index']]],507 ····['dependency_20graph_307',·['Module·dependency·graph',·['../page_modulegraph.xhtml',·1,·'index']]],
508 ····['derivative_308',·['derivative',·['../structgmx_1_1NumericalSplineTableInput.xhtml#a5a62dd0e8d27284c17e59cd4a6e2f1b5',·1,·'gmx::NumericalSplineTableInput::derivative'],508 ····['derivative_308',·['derivative',·['../structgmx_1_1NumericalSplineTableInput.xhtml#a5a62dd0e8d27284c17e59cd4a6e2f1b5',·1,·'gmx::NumericalSplineTableInput::derivative'],
509 ········['../structgmx_1_1AnalyticalSplineTableInput.xhtml#a5163c472ec0200cd6c48dbe7075fb5f7',·1,·'gmx::AnalyticalSplineTableInput::derivative']509 ········['../structgmx_1_1AnalyticalSplineTableInput.xhtml#a5163c472ec0200cd6c48dbe7075fb5f7',·1,·'gmx::AnalyticalSplineTableInput::derivative']
510 ····]],510 ····]],
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511 ····['desc_309',·['desc',·['../structt__pargs.xhtml#a6ad8807f446b68a6c8d764ecb394feaa',·1,·'t_pargs::desc'], 
512 ········['../structt__mapping.xhtml#a278fea1aa037831886bdbe5edbb46a21',·1,·'t_mapping::desc'], 
513 ········['../structgmx_1_1NumericalSplineTableInput.xhtml#aba3ffc19198b0d92459e38438108c8a7',·1,·'gmx::NumericalSplineTableInput::desc'],512 ········['../structgmx_1_1NumericalSplineTableInput.xhtml#aba3ffc19198b0d92459e38438108c8a7',·1,·'gmx::NumericalSplineTableInput::desc'],
514 ········['../structgmx_1_1AnalyticalSplineTableInput.xhtml#ad7e66e1eeabef358ddca2a3a2e61a014',·1,·'gmx::AnalyticalSplineTableInput::desc']513 ········['../structt__mapping.xhtml#a278fea1aa037831886bdbe5edbb46a21',·1,·'t_mapping::desc'],
 514 ········['../structt__pargs.xhtml#a6ad8807f446b68a6c8d764ecb394feaa',·1,·'t_pargs::desc']
515 ····]],515 ····]],
516 ····['describenegationto_310',·['describenegationto',·['../classgmx_1_1test_1_1RVecMatcher.xhtml#ab02df23c3cd9e32c6254e8ad62748005',·1,·'gmx::test::RVecMatcher::DescribeNegationTo()'],516 ····['describenegationto_310',·['describenegationto',·['../classgmx_1_1test_1_1RVecMatcher.xhtml#ab02df23c3cd9e32c6254e8ad62748005',·1,·'gmx::test::RVecMatcher::DescribeNegationTo()'],
517 ········['../classgmx_1_1test_1_1FloatTypeMatcher.xhtml#a8cbd9361625afc3b74009bbcb416fbb4',·1,·'gmx::test::FloatTypeMatcher::DescribeNegationTo()']517 ········['../classgmx_1_1test_1_1FloatTypeMatcher.xhtml#a8cbd9361625afc3b74009bbcb416fbb4',·1,·'gmx::test::FloatTypeMatcher::DescribeNegationTo()']
518 ····]],518 ····]],
519 ····['describeto_311',·['describeto',·['../classgmx_1_1test_1_1RVecMatcher.xhtml#ac3354c999725b25550a018becd653f1b',·1,·'gmx::test::RVecMatcher::DescribeTo()'],519 ····['describeto_311',·['describeto',·['../classgmx_1_1test_1_1RVecMatcher.xhtml#ac3354c999725b25550a018becd653f1b',·1,·'gmx::test::RVecMatcher::DescribeTo()'],
520 ········['../classgmx_1_1test_1_1FloatTypeMatcher.xhtml#aa882969bb93bebe25b7c701c0a947e26',·1,·'gmx::test::FloatTypeMatcher::DescribeTo()']520 ········['../classgmx_1_1test_1_1FloatTypeMatcher.xhtml#aa882969bb93bebe25b7c701c0a947e26',·1,·'gmx::test::FloatTypeMatcher::DescribeTo()']
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 522 ····['description_312',·['description',·['../classgmx_1_1AbstractOptionStorage.xhtml#a08320dd95f482581101dcf84bcef3ebe',·1,·'gmx::AbstractOptionStorage::description()'],
522 ····['description_312',·['description',·['../structgmx_1_1SelectionOptionManager_1_1Impl_1_1SelectionRequest.xhtml#a6777db2e9afb678f3ff6ac689de39250',·1,·'gmx::SelectionOptionManager::Impl::SelectionRequest::description()'],523 ········['../structgmx_1_1SelectionOptionManager_1_1Impl_1_1SelectionRequest.xhtml#a6777db2e9afb678f3ff6ac689de39250',·1,·'gmx::SelectionOptionManager::Impl::SelectionRequest::description()'],
523 ········['../classgmx_1_1OptionTemplate.xhtml#a93759b48e9bcea7a890ae6f2bf850ff5',·1,·'gmx::OptionTemplate::description()'], 
524 ········['../classgmx_1_1test_1_1TestDevice.xhtml#af1fb2dc1689e264a1f3966d30d62e8a9',·1,·'gmx::test::TestDevice::description()'],524 ········['../classgmx_1_1test_1_1TestDevice.xhtml#af1fb2dc1689e264a1f3966d30d62e8a9',·1,·'gmx::test::TestDevice::description()'],
525 ········['../classgmx_1_1AbstractOptionStorage.xhtml#a08320dd95f482581101dcf84bcef3ebe',·1,·'gmx::AbstractOptionStorage::description()']525 ········['../classgmx_1_1OptionTemplate.xhtml#a93759b48e9bcea7a890ae6f2bf850ff5',·1,·'gmx::OptionTemplate::description()']
526 ····]],526 ····]],
527 ····['descriptionwithoptiondetails_313',·['descriptionWithOptionDetails',·['../group__module__commandline.xhtml#gafaaf978f9092c4e61c8413eb51388ced',·1,·'gmx::anonymous_namespace{cmdlinehelpwriter.cpp}']]],527 ····['descriptionwithoptiondetails_313',·['descriptionWithOptionDetails',·['../group__module__commandline.xhtml#gafaaf978f9092c4e61c8413eb51388ced',·1,·'gmx::anonymous_namespace{cmdlinehelpwriter.cpp}']]],
528 ····['deserialize_314',·['deserialize',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml#a573409925bc2f6892828dc2d554f880f',·1,·'gmx::ReadCheckpointDataHolder']]],528 ····['deserialize_314',·['deserialize',·['../classgmx_1_1ReadCheckpointDataHolder.xhtml#a573409925bc2f6892828dc2d554f880f',·1,·'gmx::ReadCheckpointDataHolder']]],
529 ····['deserializedeviceinformations_315',·['deserializedeviceinformations',·['../device__management_8h.xhtml#ac3e3321880ed36de04c55efebb5fcbef',·1,·'deserializeDeviceInformations(gmx::ISerializer·*serializer):&#160;device_management_common.cpp'],529 ····['deserializedeviceinformations_315',·['deserializedeviceinformations',·['../device__management_8h.xhtml#ac3e3321880ed36de04c55efebb5fcbef',·1,·'deserializeDeviceInformations(gmx::ISerializer·*serializer):&#160;device_management_common.cpp'],
530 ········['../device__management__common_8cpp.xhtml#ac3e3321880ed36de04c55efebb5fcbef',·1,·'deserializeDeviceInformations(gmx::ISerializer·*serializer):&#160;device_management_common.cpp']530 ········['../device__management__common_8cpp.xhtml#ac3e3321880ed36de04c55efebb5fcbef',·1,·'deserializeDeviceInformations(gmx::ISerializer·*serializer):&#160;device_management_common.cpp']
531 ····]],531 ····]],
532 ····['deserializefepstatevalue_316',·['deserializefepstatevalue',·['../namespaceanonymous__namespace_02atoms_8cpp_03.xhtml#a59732844e878078ee4146a748ab22ce4',·1,·'anonymous_namespace{atoms.cpp}::deserializeFEPStateValue(gmx::ISerializer·*serializer,·FEPStateValue&lt;·T·&gt;·*value)'],532 ····['deserializefepstatevalue_316',·['deserializefepstatevalue',·['../namespaceanonymous__namespace_02atoms_8cpp_03.xhtml#a59732844e878078ee4146a748ab22ce4',·1,·'anonymous_namespace{atoms.cpp}::deserializeFEPStateValue(gmx::ISerializer·*serializer,·FEPStateValue&lt;·T·&gt;·*value)'],
Offset 634, 16 lines modifiedOffset 634, 16 lines modified
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635 ····['deviceinfolist_5f_393',·['deviceInfoList_',·['../structgmx_1_1DeviceDetectionResult.xhtml#a70ea01a606765254475f43b92a678218',·1,·'gmx::DeviceDetectionResult']]],635 ····['deviceinfolist_5f_393',·['deviceInfoList_',·['../structgmx_1_1DeviceDetectionResult.xhtml#a70ea01a606765254475f43b92a678218',·1,·'gmx::DeviceDetectionResult']]],
636 ····['deviceinformation_394',·['DeviceInformation',·['../structDeviceInformation.xhtml',·1,·'']]],636 ····['deviceinformation_394',·['DeviceInformation',·['../structDeviceInformation.xhtml',·1,·'']]],
637 ····['devicenottargeted_395',·['DeviceNotTargeted',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888ae0a8f15beccf0777dc0db7d1596b1e02',·1,·'device_information.h']]],637 ····['devicenottargeted_395',·['DeviceNotTargeted',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888ae0a8f15beccf0777dc0db7d1596b1e02',·1,·'device_information.h']]],
638 ····['devices_396',·['devices',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a2e5f16d9ac9b2a7e020450a8bbde0c67',·1,·'gmx::HardwareTopology::Machine']]],638 ····['devices_396',·['devices',·['../structgmx_1_1HardwareTopology_1_1Machine.xhtml#a2e5f16d9ac9b2a7e020450a8bbde0c67',·1,·'gmx::HardwareTopology::Machine']]],
639 ····['devicesselectedbyuser_397',·['devicesSelectedByUser',·['../structgmx__hw__opt__t.xhtml#afcd054472cdb483614394e44d8526ac2',·1,·'gmx_hw_opt_t']]],639 ····['devicesselectedbyuser_397',·['devicesSelectedByUser',·['../structgmx__hw__opt__t.xhtml#afcd054472cdb483614394e44d8526ac2',·1,·'gmx_hw_opt_t']]],
640 ····['devicestatus_398',·['DeviceStatus',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888',·1,·'device_information.h']]],640 ····['devicestatus_398',·['DeviceStatus',·['../device__information_8h.xhtml#a0b85af2bfbb9599409b639e98717c888',·1,·'device_information.h']]],
641 ····['devicestream_399',·['devicestream',·['../classDeviceStream.xhtml#acec1cd32716673fce69738e57e3b4ccb',·1,·'DeviceStream::DeviceStream()'], 
642 ········['../classgmx_1_1test_1_1TestDevice.xhtml#afa7d5d2194cded2f8d2717fe85eb47de',·1,·'gmx::test::TestDevice::deviceStream()'],641 ····['devicestream_399',·['devicestream',·['../classgmx_1_1test_1_1TestDevice.xhtml#afa7d5d2194cded2f8d2717fe85eb47de',·1,·'gmx::test::TestDevice::deviceStream()'],
 642 ········['../classDeviceStream.xhtml#acec1cd32716673fce69738e57e3b4ccb',·1,·'DeviceStream::DeviceStream()'],
643 ········['../classDeviceStream.xhtml',·1,·'DeviceStream']643 ········['../classDeviceStream.xhtml',·1,·'DeviceStream']
644 ····]],644 ····]],
645 ····['devicestreammanager_400',·['devicestreammanager',·['../classgmx_1_1DeviceStreamManager.xhtml#af4af89575a6d318fe0d107f74df07122',·1,·'gmx::DeviceStreamManager::DeviceStreamManager()'],645 ····['devicestreammanager_400',·['devicestreammanager',·['../classgmx_1_1DeviceStreamManager.xhtml#af4af89575a6d318fe0d107f74df07122',·1,·'gmx::DeviceStreamManager::DeviceStreamManager()'],
646 ········['../classgmx_1_1DeviceStreamManager.xhtml',·1,·'gmx::DeviceStreamManager']646 ········['../classgmx_1_1DeviceStreamManager.xhtml',·1,·'gmx::DeviceStreamManager']
647 ····]],647 ····]],
648 ····['devicestreammanagertest_401',·['DeviceStreamManagerTest',·['../classgmx_1_1test_1_1anonymous__namespace_02device__stream__manager_8cpp_03_1_1DeviceStreamManagerTest.xhtml',·1,·'gmx::test::anonymous_namespace{device_stream_manager.cpp}']]],648 ····['devicestreammanagertest_401',·['DeviceStreamManagerTest',·['../classgmx_1_1test_1_1anonymous__namespace_02device__stream__manager_8cpp_03_1_1DeviceStreamManagerTest.xhtml',·1,·'gmx::test::anonymous_namespace{device_stream_manager.cpp}']]],
649 ····['devicestreampriority_402',·['DeviceStreamPriority',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319',·1,·'device_stream.h']]],649 ····['devicestreampriority_402',·['DeviceStreamPriority',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319',·1,·'device_stream.h']]],
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Offset 266, 28 lines modifiedOffset 266, 28 lines modified
266 ····['enableexternalfepstatesetting_163',·['enableexternalfepstatesetting',·['../classgmx_1_1FreeEnergyPerturbationData.xhtml#a8aab439423afb11beab47abb9201f6bc',·1,·'gmx::FreeEnergyPerturbationData::enableExternalFepStateSetting()'],266 ····['enableexternalfepstatesetting_163',·['enableexternalfepstatesetting',·['../classgmx_1_1FreeEnergyPerturbationData.xhtml#a8aab439423afb11beab47abb9201f6bc',·1,·'gmx::FreeEnergyPerturbationData::enableExternalFepStateSetting()'],
267 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#a8d891ed09cdc529b8b91023c5fe54ac7',·1,·'gmx::FreeEnergyPerturbationData::Element::enableExternalFepStateSetting()']267 ········['../classgmx_1_1FreeEnergyPerturbationData_1_1Element.xhtml#a8d891ed09cdc529b8b91023c5fe54ac7',·1,·'gmx::FreeEnergyPerturbationData::Element::enableExternalFepStateSetting()']
268 ····]],268 ····]],
269 ····['enablefpexceptions_164',·['enableFPExceptions',·['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#afffd8e4835ea5a633d3a6ab2b9c62ae7',·1,·'gmx::CommandLineCommonOptionsHolder']]],269 ····['enablefpexceptions_164',·['enableFPExceptions',·['../classgmx_1_1CommandLineCommonOptionsHolder.xhtml#afffd8e4835ea5a633d3a6ab2b9c62ae7',·1,·'gmx::CommandLineCommonOptionsHolder']]],
270 ····['enablegpupmedecomposition_165',·['enableGpuPmeDecomposition',·['../structgmx_1_1DevelopmentFeatureFlags.xhtml#a04cfda43ef27edf7b7843ba78f183a81',·1,·'gmx::DevelopmentFeatureFlags']]],270 ····['enablegpupmedecomposition_165',·['enableGpuPmeDecomposition',·['../structgmx_1_1DevelopmentFeatureFlags.xhtml#a04cfda43ef27edf7b7843ba78f183a81',·1,·'gmx::DevelopmentFeatureFlags']]],
271 ····['enablenvshmem_166',·['enableNvshmem',·['../structgmx_1_1DevelopmentFeatureFlags.xhtml#ae0c857b2cd89caa0d9c6b0da311083a7',·1,·'gmx::DevelopmentFeatureFlags']]],271 ····['enablenvshmem_166',·['enableNvshmem',·['../structgmx_1_1DevelopmentFeatureFlags.xhtml#ae0c857b2cd89caa0d9c6b0da311083a7',·1,·'gmx::DevelopmentFeatureFlags']]],
272 ····['encodedvalue_167',·['encodedValue',·['../namespacegmx_1_1test_1_1anonymous__namespace_02haloexchange__mpi_8cpp_03.xhtml#a777c050279cadf1f42c3145b123bd13c',·1,·'gmx::test::anonymous_namespace{haloexchange_mpi.cpp}']]],272 ····['encodedvalue_167',·['encodedValue',·['../namespacegmx_1_1test_1_1anonymous__namespace_02haloexchange__mpi_8cpp_03.xhtml#a777c050279cadf1f42c3145b123bd13c',·1,·'gmx::test::anonymous_namespace{haloexchange_mpi.cpp}']]],
 273 ····['end_168',·['end',·['../classWorkDivision.xhtml#a55b972ca8118361804f650ae4fd70f77',·1,·'WorkDivision::end()'],
273 ····['end_168',·['end',·['../classgmx_1_1Range.xhtml#a5f692bf991d88d90ed8e33cc29a1cc51',·1,·'gmx::Range::end()'],274 ········['../classgmx_1_1Range.xhtml#a5f692bf991d88d90ed8e33cc29a1cc51',·1,·'gmx::Range::end()'],
274 ········['../classgmx_1_1ArrayRef.xhtml#ad78963af3304f05b7afb61f3d2d3c682',·1,·'gmx::ArrayRef::end()'],275 ········['../classgmx_1_1ArrayRef.xhtml#ad78963af3304f05b7afb61f3d2d3c682',·1,·'gmx::ArrayRef::end()'],
275 ········['../classgmx_1_1FixedCapacityVector.xhtml#a0ce73444d0fb3143d0af6a5f8b3ab1c1',·1,·'gmx::FixedCapacityVector::end()·noexcept'],276 ········['../classgmx_1_1FixedCapacityVector.xhtml#a0ce73444d0fb3143d0af6a5f8b3ab1c1',·1,·'gmx::FixedCapacityVector::end()·noexcept'],
276 ········['../classgmx_1_1FixedCapacityVector.xhtml#a1950a5a0fa86373664dd67fa2b7341f1',·1,·'gmx::FixedCapacityVector::end()·const·noexcept'],277 ········['../classgmx_1_1FixedCapacityVector.xhtml#a1950a5a0fa86373664dd67fa2b7341f1',·1,·'gmx::FixedCapacityVector::end()·const·noexcept'],
277 ········['../classgmx_1_1EnergyFrame.xhtml#a822dc495870d6ced6e1e3bf3dd12b001',·1,·'gmx::EnergyFrame::end()'],278 ········['../classgmx_1_1EnergyFrame.xhtml#a822dc495870d6ced6e1e3bf3dd12b001',·1,·'gmx::EnergyFrame::end()'],
278 ········['../namespacegmx.xhtml#adc38f264fbd12f7c458acaa006bafc23',·1,·'gmx::end(const·BasicMdspan·&amp;basicMdspan)'], 
279 ········['../namespacegmx.xhtml#a052781576fbbc1c6970be93d67899ed6',·1,·'gmx::end(MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'], 
280 ········['../namespacegmx.xhtml#ad27509079b48f39c3f4fab22fd1a7796',·1,·'gmx::end(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'], 
281 ········['../classIListRange.xhtml#af63fb2ced09ef9eccb0e88fbc7b26b09',·1,·'IListRange::end()'],279 ········['../classIListRange.xhtml#af63fb2ced09ef9eccb0e88fbc7b26b09',·1,·'IListRange::end()'],
282 ········['../classgmx_1_1EnergyTerm.xhtml#ac9ab5be006073499a3fc86511b7fb2da',·1,·'gmx::EnergyTerm::end()'], 
283 ········['../classWorkDivision.xhtml#a55b972ca8118361804f650ae4fd70f77',·1,·'WorkDivision::end()'], 
284 ········['../classAtomRange.xhtml#a61e27abc7881206f14ae2dd2af0e97f3',·1,·'AtomRange::end()'],280 ········['../classAtomRange.xhtml#a61e27abc7881206f14ae2dd2af0e97f3',·1,·'AtomRange::end()'],
 281 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#aa5d327c9a3459a9130dca36a084625c7',·1,·'gmx::internal::SimdArrayRef::end()'],
285 ········['../classgmx_1_1IntegerBox.xhtml#a88b65fffe1dd2f10b4283ce6c7c0881f',·1,·'gmx::IntegerBox::end()'],282 ········['../classgmx_1_1IntegerBox.xhtml#a88b65fffe1dd2f10b4283ce6c7c0881f',·1,·'gmx::IntegerBox::end()'],
286 ········['../classgmx_1_1internal_1_1SimdArrayRef.xhtml#aa5d327c9a3459a9130dca36a084625c7',·1,·'gmx::internal::SimdArrayRef::end()']283 ········['../classgmx_1_1EnergyTerm.xhtml#ac9ab5be006073499a3fc86511b7fb2da',·1,·'gmx::EnergyTerm::end()'],
 284 ········['../namespacegmx.xhtml#ad27509079b48f39c3f4fab22fd1a7796',·1,·'gmx::end(const·MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'],
 285 ········['../namespacegmx.xhtml#a052781576fbbc1c6970be93d67899ed6',·1,·'gmx::end(MultiDimArray&lt;·TContainer,·Extents·&gt;·&amp;multiDimArray)'],
 286 ········['../namespacegmx.xhtml#adc38f264fbd12f7c458acaa006bafc23',·1,·'gmx::end(const·BasicMdspan·&amp;basicMdspan)']
287 ····]],287 ····]],
288 ····['end_5f_169',·['end_',·['../classgmx_1_1SelectionParserSymbolIterator_1_1Impl.xhtml#adaad6e3477afb09f0ebce0ad91d3bd6d',·1,·'gmx::SelectionParserSymbolIterator::Impl']]],288 ····['end_5f_169',·['end_',·['../classgmx_1_1SelectionParserSymbolIterator_1_1Impl.xhtml#adaad6e3477afb09f0ebce0ad91d3bd6d',·1,·'gmx::SelectionParserSymbolIterator::Impl']]],
289 ····['end_5faction_170',·['END_ACTION',·['../parser__internal_8h.xhtml#a8cff21a873fa69df9a845af194a2bb38',·1,·'parser_internal.h']]],289 ····['end_5faction_170',·['END_ACTION',·['../parser__internal_8h.xhtml#a8cff21a873fa69df9a845af194a2bb38',·1,·'parser_internal.h']]],
290 ····['end_5faction_5ftoplevel_171',·['END_ACTION_TOPLEVEL',·['../parser__internal_8h.xhtml#ac78a505847a3259da9fdc0ab88fd97f2',·1,·'parser_internal.h']]],290 ····['end_5faction_5ftoplevel_171',·['END_ACTION_TOPLEVEL',·['../parser__internal_8h.xhtml#ac78a505847a3259da9fdc0ab88fd97f2',·1,·'parser_internal.h']]],
291 ····['endianswapbehavior_172',·['EndianSwapBehavior',·['../namespacegmx.xhtml#a9dcfc375435eb5edc0e45544fd43e655',·1,·'gmx']]],291 ····['endianswapbehavior_172',·['EndianSwapBehavior',·['../namespacegmx.xhtml#a9dcfc375435eb5edc0e45544fd43e655',·1,·'gmx']]],
292 ····['endindex_173',·['endIndex',·['../structgmx_1_1SelectionLocation.xhtml#a41e340847acbb630e084602422793e99',·1,·'gmx::SelectionLocation']]],292 ····['endindex_173',·['endIndex',·['../structgmx_1_1SelectionLocation.xhtml#a41e340847acbb630e084602422793e99',·1,·'gmx::SelectionLocation']]],
293 ····['enditerator_174',·['endIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#aa020bd1b932f67be6353e08f48d990da',·1,·'gmx::SelectionParserSymbolTable']]],293 ····['enditerator_174',·['endIterator',·['../classgmx_1_1SelectionParserSymbolTable.xhtml#aa020bd1b932f67be6353e08f48d990da',·1,·'gmx::SelectionParserSymbolTable']]],
Offset 685, 21 lines modifiedOffset 685, 21 lines modified
685 ····['etc_5fandersen_392',·['ETC_ANDERSEN',·['../md__enums_8h.xhtml#a42b141c40b00fbf6aaa7d42f79b004bf',·1,·'md_enums.h']]],685 ····['etc_5fandersen_392',·['ETC_ANDERSEN',·['../md__enums_8h.xhtml#a42b141c40b00fbf6aaa7d42f79b004bf',·1,·'md_enums.h']]],
686 ····['ethane_393',·['ethane',·['../namespacegmx_1_1test_1_1anonymous__namespace_02updategroups_8cpp_03.xhtml#a90722e7d44d5d0a063d714057d5c9ee5',·1,·'gmx::test::anonymous_namespace{updategroups.cpp}']]],686 ····['ethane_393',·['ethane',·['../namespacegmx_1_1test_1_1anonymous__namespace_02updategroups_8cpp_03.xhtml#a90722e7d44d5d0a063d714057d5c9ee5',·1,·'gmx::test::anonymous_namespace{updategroups.cpp}']]],
687 ····['ethaneua_394',·['ethaneUA',·['../namespacegmx_1_1test_1_1anonymous__namespace_02updategroups_8cpp_03.xhtml#a27779df09c39110bb540b42893717ef7',·1,·'gmx::test::anonymous_namespace{updategroups.cpp}']]],687 ····['ethaneua_394',·['ethaneUA',·['../namespacegmx_1_1test_1_1anonymous__namespace_02updategroups_8cpp_03.xhtml#a27779df09c39110bb540b42893717ef7',·1,·'gmx::test::anonymous_namespace{updategroups.cpp}']]],
688 ····['eticoul_395',·['etiCOUL',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67a22814a4fa63720f5c6b6008dbceb4781',·1,·'forcetable.h']]],688 ····['eticoul_395',·['etiCOUL',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67a22814a4fa63720f5c6b6008dbceb4781',·1,·'forcetable.h']]],
689 ····['etilj12_396',·['etiLJ12',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67abd1f60de18c1a08fbbf8f701f18bc5dc',·1,·'forcetable.h']]],689 ····['etilj12_396',·['etiLJ12',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67abd1f60de18c1a08fbbf8f701f18bc5dc',·1,·'forcetable.h']]],
690 ····['etilj6_397',·['etiLJ6',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67a14de69e4e7dd8738916c6965be9a3b90',·1,·'forcetable.h']]],690 ····['etilj6_397',·['etiLJ6',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67a14de69e4e7dd8738916c6965be9a3b90',·1,·'forcetable.h']]],
691 ····['etinr_398',·['etiNR',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67aefe23a4b7521eb5cf444aa993db19829',·1,·'forcetable.h']]],691 ····['etinr_398',·['etiNR',·['../forcetable_8h.xhtml#a9334a5b9057f32da96db9b5c6a045d67aefe23a4b7521eb5cf444aa993db19829',·1,·'forcetable.h']]],
692 ····['evaluate_399',·['evaluate',·['../classgmx_1_1SelectionCollection.xhtml#a3d981d35e2fbd35f64092063871fdef3',·1,·'gmx::SelectionCollection::evaluate()'], 
693 ········['../classgmx_1_1IRestraintPotential.xhtml#abd785aca4a7790377720f445e8263ffb',·1,·'gmx::IRestraintPotential::evaluate()'], 
694 ········['../structt__compiler__data.xhtml#a5128b3f090d5c7fb2eb867570e89fe3b',·1,·'t_compiler_data::evaluate'],692 ····['evaluate_399',·['evaluate',·['../structt__compiler__data.xhtml#a5128b3f090d5c7fb2eb867570e89fe3b',·1,·'t_compiler_data::evaluate'],
695 ········['../classgmx_1_1SelectionEvaluator.xhtml#ad86f6b06a9c14294732430b01329e0af',·1,·'gmx::SelectionEvaluator::evaluate()'], 
696 ········['../classgmx_1_1SelectionTreeElement.xhtml#aa2729334e9625ab9446f87dee5e2acf4',·1,·'gmx::SelectionTreeElement::evaluate'],693 ········['../classgmx_1_1SelectionTreeElement.xhtml#aa2729334e9625ab9446f87dee5e2acf4',·1,·'gmx::SelectionTreeElement::evaluate'],
697 ········['../classgmx_1_1anonymous__namespace_02electricfield_8cpp_03_1_1ElectricFieldDimension.xhtml#a0601d30a0ad2f0ca3cbdd80929d66ad1',·1,·'gmx::anonymous_namespace{electricfield.cpp}::ElectricFieldDimension::evaluate()'],694 ········['../classgmx_1_1anonymous__namespace_02electricfield_8cpp_03_1_1ElectricFieldDimension.xhtml#a0601d30a0ad2f0ca3cbdd80929d66ad1',·1,·'gmx::anonymous_namespace{electricfield.cpp}::ElectricFieldDimension::evaluate()'],
698 ········['../classgmx_1_1PullCoordExpressionParser.xhtml#aedf144756d7dd044b691f937f05ed07a',·1,·'gmx::PullCoordExpressionParser::evaluate()']695 ········['../classgmx_1_1PullCoordExpressionParser.xhtml#aedf144756d7dd044b691f937f05ed07a',·1,·'gmx::PullCoordExpressionParser::evaluate()'],
 696 ········['../classgmx_1_1SelectionEvaluator.xhtml#ad86f6b06a9c14294732430b01329e0af',·1,·'gmx::SelectionEvaluator::evaluate()'],
 697 ········['../classgmx_1_1IRestraintPotential.xhtml#abd785aca4a7790377720f445e8263ffb',·1,·'gmx::IRestraintPotential::evaluate()'],
 698 ········['../classgmx_1_1SelectionCollection.xhtml#a3d981d35e2fbd35f64092063871fdef3',·1,·'gmx::SelectionCollection::evaluate()']
699 ····]],699 ····]],
700 ····['evaluate_2ecpp_400',·['evaluate.cpp',·['../evaluate_8cpp.xhtml',·1,·'']]],700 ····['evaluate_2ecpp_400',·['evaluate.cpp',·['../evaluate_8cpp.xhtml',·1,·'']]],
701 ····['evaluate_2eh_401',·['evaluate.h',·['../evaluate_8h.xhtml',·1,·'']]],701 ····['evaluate_2eh_401',·['evaluate.h',·['../evaluate_8h.xhtml',·1,·'']]],
702 ····['evaluate_5fall_402',·['evaluate_all',·['../sm__simple_8cpp.xhtml#ab5d9aaa1591fbf99ef54f35c930d876f',·1,·'sm_simple.cpp']]],702 ····['evaluate_5fall_402',·['evaluate_all',·['../sm__simple_8cpp.xhtml#ab5d9aaa1591fbf99ef54f35c930d876f',·1,·'sm_simple.cpp']]],
703 ····['evaluate_5faltloc_403',·['evaluate_altloc',·['../sm__simple_8cpp.xhtml#ac95693c16cf861f2aba6655c0ff6f0d2',·1,·'sm_simple.cpp']]],703 ····['evaluate_5faltloc_403',·['evaluate_altloc',·['../sm__simple_8cpp.xhtml#ac95693c16cf861f2aba6655c0ff6f0d2',·1,·'sm_simple.cpp']]],
704 ····['evaluate_5fatomname_404',·['evaluate_atomname',·['../sm__simple_8cpp.xhtml#ad8d60c137d3bdb4cc2ef7458abdadfa5',·1,·'sm_simple.cpp']]],704 ····['evaluate_5fatomname_404',·['evaluate_atomname',·['../sm__simple_8cpp.xhtml#ad8d60c137d3bdb4cc2ef7458abdadfa5',·1,·'sm_simple.cpp']]],
705 ····['evaluate_5fatomnr_405',·['evaluate_atomnr',·['../sm__simple_8cpp.xhtml#ac012c9061ab901e7085b9e6be0b0dfb1',·1,·'sm_simple.cpp']]],705 ····['evaluate_5fatomnr_405',·['evaluate_atomnr',·['../sm__simple_8cpp.xhtml#ac012c9061ab901e7085b9e6be0b0dfb1',·1,·'sm_simple.cpp']]],
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739 ····['evaluate_5fsingle_439',·['evaluate_single',·['../pairs_8cpp.xhtml#a53338e7f9d3499aabdf8f25c6af5f238',·1,·'pairs.cpp']]],739 ····['evaluate_5fsingle_439',·['evaluate_single',·['../pairs_8cpp.xhtml#a53338e7f9d3499aabdf8f25c6af5f238',·1,·'pairs.cpp']]],
740 ····['evaluate_5fwithin_440',·['evaluate_within',·['../sm__distance_8cpp.xhtml#a085423b7b3380c50dc2c2aa0042070fe',·1,·'sm_distance.cpp']]],740 ····['evaluate_5fwithin_440',·['evaluate_within',·['../sm__distance_8cpp.xhtml#a085423b7b3380c50dc2c2aa0042070fe',·1,·'sm_distance.cpp']]],
741 ····['evaluate_5fx_441',·['evaluate_x',·['../sm__simple_8cpp.xhtml#ab0e74f5a11a8275423b617bbc8d247dc',·1,·'sm_simple.cpp']]],741 ····['evaluate_5fx_441',·['evaluate_x',·['../sm__simple_8cpp.xhtml#ab0e74f5a11a8275423b617bbc8d247dc',·1,·'sm_simple.cpp']]],
742 ····['evaluate_5fy_442',·['evaluate_y',·['../sm__simple_8cpp.xhtml#ac7586817f1b4032087aa7b625224757c',·1,·'sm_simple.cpp']]],742 ····['evaluate_5fy_442',·['evaluate_y',·['../sm__simple_8cpp.xhtml#ac7586817f1b4032087aa7b625224757c',·1,·'sm_simple.cpp']]],
743 ····['evaluate_5fz_443',·['evaluate_z',·['../sm__simple_8cpp.xhtml#ac69865bb371f6f50ed83c06fb0cf5531',·1,·'sm_simple.cpp']]],743 ····['evaluate_5fz_443',·['evaluate_z',·['../sm__simple_8cpp.xhtml#ac69865bb371f6f50ed83c06fb0cf5531',·1,·'sm_simple.cpp']]],
744 ····['evaluatecontractionpoint_444',·['evaluateContractionPoint',·['../classgmx_1_1NelderMeadSimplex.xhtml#a46d235715a1174267e45aebae8beb0c7',·1,·'gmx::NelderMeadSimplex']]],744 ····['evaluatecontractionpoint_444',·['evaluateContractionPoint',·['../classgmx_1_1NelderMeadSimplex.xhtml#a46d235715a1174267e45aebae8beb0c7',·1,·'gmx::NelderMeadSimplex']]],
745 ····['evaluated_445',·['Evaluated',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7ad603de8be2ed385509ef70a6c0099623',·1,·'gmx::SelectionCollection::Impl']]],745 ····['evaluated_445',·['Evaluated',·['../classgmx_1_1SelectionCollection_1_1Impl.xhtml#a2b56c1edc3a7dd352db9cf7bc94673d7ad603de8be2ed385509ef70a6c0099623',·1,·'gmx::SelectionCollection::Impl']]],
746 ····['evaluatederivative_446',·['evaluatederivative',·['../classgmx_1_1CubicSplineTable.xhtml#af581c2c1b906e3c0f6575712d6baef44',·1,·'gmx::CubicSplineTable::evaluateDerivative(T·r,·T·*derivativeValue)·const'], 
747 ········['../classgmx_1_1CubicSplineTable.xhtml#a0422a9e17f991f1c4508e1dbae62d400',·1,·'gmx::CubicSplineTable::evaluateDerivative(T·r,·T·*derivativeValue0,·T·*derivativeValue1)·const'], 
748 ········['../classgmx_1_1CubicSplineTable.xhtml#a6fe320240e2c63165d04f1118235840e',·1,·'gmx::CubicSplineTable::evaluateDerivative(T·r,·T·*derivativeValue0,·T·*derivativeValue1,·T·*derivativeValue2)·const'], 
749 ········['../classgmx_1_1QuadraticSplineTable.xhtml#aa9e7cfaa0780aa00db5a67b62ea03a38',·1,·'gmx::QuadraticSplineTable::evaluateDerivative(T·r,·T·*derivativeValue)·const'],746 ····['evaluatederivative_446',·['evaluatederivative',·['../classgmx_1_1QuadraticSplineTable.xhtml#aa9e7cfaa0780aa00db5a67b62ea03a38',·1,·'gmx::QuadraticSplineTable::evaluateDerivative(T·r,·T·*derivativeValue)·const'],
 747 ········['../classgmx_1_1QuadraticSplineTable.xhtml#afb93e2ab60eb02c1b9ea5b93eb6c43b8',·1,·'gmx::QuadraticSplineTable::evaluateDerivative(T·r,·T·*derivativeValue1,·T·*derivativeValue2,·T·*derivativeValue3)·const'],
750 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a293c4b989907dd4bd628b72a46735e81',·1,·'gmx::QuadraticSplineTable::evaluateDerivative(T·r,·T·*derivativeValue1,·T·*derivativeValue2)·const'],748 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a293c4b989907dd4bd628b72a46735e81',·1,·'gmx::QuadraticSplineTable::evaluateDerivative(T·r,·T·*derivativeValue1,·T·*derivativeValue2)·const'],
751 ········['../classgmx_1_1QuadraticSplineTable.xhtml#afb93e2ab60eb02c1b9ea5b93eb6c43b8',·1,·'gmx::QuadraticSplineTable::evaluateDerivative(T·r,·T·*derivativeValue1,·T·*derivativeValue2,·T·*derivativeValue3)·const']749 ········['../classgmx_1_1CubicSplineTable.xhtml#a6fe320240e2c63165d04f1118235840e',·1,·'gmx::CubicSplineTable::evaluateDerivative(T·r,·T·*derivativeValue0,·T·*derivativeValue1,·T·*derivativeValue2)·const'],
 750 ········['../classgmx_1_1CubicSplineTable.xhtml#a0422a9e17f991f1c4508e1dbae62d400',·1,·'gmx::CubicSplineTable::evaluateDerivative(T·r,·T·*derivativeValue0,·T·*derivativeValue1)·const'],
 751 ········['../classgmx_1_1CubicSplineTable.xhtml#af581c2c1b906e3c0f6575712d6baef44',·1,·'gmx::CubicSplineTable::evaluateDerivative(T·r,·T·*derivativeValue)·const']
752 ····]],752 ····]],
753 ····['evaluateexpansionpoint_447',·['evaluateExpansionPoint',·['../classgmx_1_1NelderMeadSimplex.xhtml#a5d83a966145a4b49ccabcbc47b9c4df1',·1,·'gmx::NelderMeadSimplex']]],753 ····['evaluateexpansionpoint_447',·['evaluateExpansionPoint',·['../classgmx_1_1NelderMeadSimplex.xhtml#a5d83a966145a4b49ccabcbc47b9c4df1',·1,·'gmx::NelderMeadSimplex']]],
754 ····['evaluatefinal_448',·['evaluatefinal',·['../classgmx_1_1SelectionEvaluator.xhtml#a6d5202a595b0183631ba627d726f85c1',·1,·'gmx::SelectionEvaluator::evaluateFinal()'],754 ····['evaluatefinal_448',·['evaluatefinal',·['../classgmx_1_1SelectionEvaluator.xhtml#a6d5202a595b0183631ba627d726f85c1',·1,·'gmx::SelectionEvaluator::evaluateFinal()'],
755 ········['../classgmx_1_1SelectionCollection.xhtml#aeb8069b1be3abd49bad0a1431f91ad7c',·1,·'gmx::SelectionCollection::evaluateFinal()']755 ········['../classgmx_1_1SelectionCollection.xhtml#aeb8069b1be3abd49bad0a1431f91ad7c',·1,·'gmx::SelectionCollection::evaluateFinal()']
756 ····]],756 ····]],
757 ····['evaluateforce_449',·['evaluateforce',·['../classgmx_1_1DensityFittingForce_1_1Impl.xhtml#a94d7bc3daea70ddad195019ed87e5956',·1,·'gmx::DensityFittingForce::Impl::evaluateForce()'],757 ····['evaluateforce_449',·['evaluateforce',·['../classgmx_1_1DensityFittingForce_1_1Impl.xhtml#a94d7bc3daea70ddad195019ed87e5956',·1,·'gmx::DensityFittingForce::Impl::evaluateForce()'],
758 ········['../classgmx_1_1DensityFittingForce.xhtml#a48de58358220847863465808b507fd2e',·1,·'gmx::DensityFittingForce::evaluateForce()']758 ········['../classgmx_1_1DensityFittingForce.xhtml#a48de58358220847863465808b507fd2e',·1,·'gmx::DensityFittingForce::evaluateForce()']
759 ····]],759 ····]],
760 ····['evaluateforces_450',·['evaluateForces',·['../classgmx_1_1SelectionOption.xhtml#ab1969e91ec57a1282b5e796800389933',·1,·'gmx::SelectionOption']]],760 ····['evaluateforces_450',·['evaluateForces',·['../classgmx_1_1SelectionOption.xhtml#ab1969e91ec57a1282b5e796800389933',·1,·'gmx::SelectionOption']]],
761 ····['evaluatefunction_451',·['evaluatefunction',·['../classgmx_1_1QuadraticSplineTable.xhtml#a55a6e8f12773a991d4fbe47ef10a8b7a',·1,·'gmx::QuadraticSplineTable::evaluateFunction(T·r,·T·*functionValue1,·T·*functionValue2,·T·*functionValue3)·const'], 
762 ········['../classgmx_1_1QuadraticSplineTable.xhtml#abef6fe237259c1d7e518f29a03c191eb',·1,·'gmx::QuadraticSplineTable::evaluateFunction(T·r,·T·*functionValue1,·T·*functionValue2)·const'], 
763 ········['../classgmx_1_1CubicSplineTable.xhtml#a624d2f3c7e52adcf7408d4da520b7859',·1,·'gmx::CubicSplineTable::evaluateFunction(T·r,·T·*functionValue)·const'],761 ····['evaluatefunction_451',·['evaluatefunction',·['../classgmx_1_1CubicSplineTable.xhtml#a624d2f3c7e52adcf7408d4da520b7859',·1,·'gmx::CubicSplineTable::evaluateFunction(T·r,·T·*functionValue)·const'],
764 ········['../classgmx_1_1CubicSplineTable.xhtml#a44e659de3e6604fa3ee01cb1422a504f',·1,·'gmx::CubicSplineTable::evaluateFunction(T·r,·T·*functionValue0,·T·*functionValue1)·const'],762 ········['../classgmx_1_1CubicSplineTable.xhtml#a44e659de3e6604fa3ee01cb1422a504f',·1,·'gmx::CubicSplineTable::evaluateFunction(T·r,·T·*functionValue0,·T·*functionValue1)·const'],
765 ········['../classgmx_1_1CubicSplineTable.xhtml#a2b6951128e8311ceb8afff6ce7fead36',·1,·'gmx::CubicSplineTable::evaluateFunction(T·r,·T·*functionValue0,·T·*functionValue1,·T·*functionValue2)·const'],763 ········['../classgmx_1_1CubicSplineTable.xhtml#a2b6951128e8311ceb8afff6ce7fead36',·1,·'gmx::CubicSplineTable::evaluateFunction(T·r,·T·*functionValue0,·T·*functionValue1,·T·*functionValue2)·const'],
766 ········['../classgmx_1_1QuadraticSplineTable.xhtml#af9aca690a0ee92af501c865d7a8e5044',·1,·'gmx::QuadraticSplineTable::evaluateFunction()']764 ········['../classgmx_1_1QuadraticSplineTable.xhtml#af9aca690a0ee92af501c865d7a8e5044',·1,·'gmx::QuadraticSplineTable::evaluateFunction(T·r,·T·*functionValue)·const'],
 765 ········['../classgmx_1_1QuadraticSplineTable.xhtml#abef6fe237259c1d7e518f29a03c191eb',·1,·'gmx::QuadraticSplineTable::evaluateFunction(T·r,·T·*functionValue1,·T·*functionValue2)·const'],
 766 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a55a6e8f12773a991d4fbe47ef10a8b7a',·1,·'gmx::QuadraticSplineTable::evaluateFunction(T·r,·T·*functionValue1,·T·*functionValue2,·T·*functionValue3)·const']
767 ····]],767 ····]],
768 ····['evaluatefunctionandderivative_452',·['evaluatefunctionandderivative',·['../classgmx_1_1CubicSplineTable.xhtml#a7313f61a65dfedf8359dbb362c111a5f',·1,·'gmx::CubicSplineTable::evaluateFunctionAndDerivative()'],768 ····['evaluatefunctionandderivative_452',·['evaluatefunctionandderivative',·['../classgmx_1_1CubicSplineTable.xhtml#ac93d0b5e34f7942ca98b2d44d40b3ea1',·1,·'gmx::CubicSplineTable::evaluateFunctionAndDerivative()'],
769 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a1829af258b70b6ed03822f07aff0190f',·1,·'gmx::QuadraticSplineTable::evaluateFunctionAndDerivative(T·r,·T·*functionValue,·T·*derivativeValue)·const'], 
770 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a6b70a811af8bd4f953ec5f668412bbaf',·1,·'gmx::QuadraticSplineTable::evaluateFunctionAndDerivative(T·r,·T·*functionValue1,·T·*derivativeValue1,·T·*functionValue2,·T·*derivativeValue2)·const'], 
771 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a155411b2d94d1728b95d4dba7755e3d7',·1,·'gmx::QuadraticSplineTable::evaluateFunctionAndDerivative(T·r,·T·*functionValue1,·T·*derivativeValue1,·T·*functionValue2,·T·*derivativeValue2,·T·*functionValue3,·T·*derivativeValue3)·const'],769 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a155411b2d94d1728b95d4dba7755e3d7',·1,·'gmx::QuadraticSplineTable::evaluateFunctionAndDerivative(T·r,·T·*functionValue1,·T·*derivativeValue1,·T·*functionValue2,·T·*derivativeValue2,·T·*functionValue3,·T·*derivativeValue3)·const'],
 770 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a6b70a811af8bd4f953ec5f668412bbaf',·1,·'gmx::QuadraticSplineTable::evaluateFunctionAndDerivative(T·r,·T·*functionValue1,·T·*derivativeValue1,·T·*functionValue2,·T·*derivativeValue2)·const'],
772 ········['../classgmx_1_1CubicSplineTable.xhtml#a863c0191a73cfea35178858ff3584bcf',·1,·'gmx::CubicSplineTable::evaluateFunctionAndDerivative(T·r,·T·*functionValue0,·T·*derivativeValue0,·T·*functionValue1,·T·*derivativeValue1)·const'],771 ········['../classgmx_1_1CubicSplineTable.xhtml#a863c0191a73cfea35178858ff3584bcf',·1,·'gmx::CubicSplineTable::evaluateFunctionAndDerivative()'],
773 ········['../classgmx_1_1CubicSplineTable.xhtml#ac93d0b5e34f7942ca98b2d44d40b3ea1',·1,·'gmx::CubicSplineTable::evaluateFunctionAndDerivative(T·r,·T·*functionValue,·T·*derivativeValue)·const']772 ········['../classgmx_1_1QuadraticSplineTable.xhtml#a1829af258b70b6ed03822f07aff0190f',·1,·'gmx::QuadraticSplineTable::evaluateFunctionAndDerivative()'],
 773 ········['../classgmx_1_1CubicSplineTable.xhtml#a7313f61a65dfedf8359dbb362c111a5f',·1,·'gmx::CubicSplineTable::evaluateFunctionAndDerivative()']
774 ····]],774 ····]],
775 ····['evaluatehelpervalues_453',·['evaluateHelperValues',·['../namespacegmx_1_1anonymous__namespace_02densityfit_8cpp_03.xhtml#a6d5392693f1b404bb92e47d63f77d090',·1,·'gmx::anonymous_namespace{densityfit.cpp}']]],775 ····['evaluatehelpervalues_453',·['evaluateHelperValues',·['../namespacegmx_1_1anonymous__namespace_02densityfit_8cpp_03.xhtml#a6d5392693f1b404bb92e47d63f77d090',·1,·'gmx::anonymous_namespace{densityfit.cpp}']]],
776 ····['evaluatemodel_454',·['evaluatemodel',·['../classgmx_1_1TorchModel.xhtml#a5044f053732fd2c28df26c1626f07bff',·1,·'gmx::TorchModel::evaluateModel()'],776 ····['evaluatemodel_454',·['evaluatemodel',·['../classgmx_1_1TorchModel.xhtml#a5044f053732fd2c28df26c1626f07bff',·1,·'gmx::TorchModel::evaluateModel()'],
777 ········['../classgmx_1_1INNPotModel.xhtml#ac41875649affd1941e519b7a671d3703',·1,·'gmx::INNPotModel::evaluateModel()']777 ········['../classgmx_1_1INNPotModel.xhtml#ac41875649affd1941e519b7a671d3703',·1,·'gmx::INNPotModel::evaluateModel()']
778 ····]],778 ····]],
779 ····['evaluatereflectionpoint_455',·['evaluateReflectionPoint',·['../classgmx_1_1NelderMeadSimplex.xhtml#a55452c154211b3eb0dc5c101e35033aa',·1,·'gmx::NelderMeadSimplex']]],779 ····['evaluatereflectionpoint_455',·['evaluateReflectionPoint',·['../classgmx_1_1NelderMeadSimplex.xhtml#a55452c154211b3eb0dc5c101e35033aa',·1,·'gmx::NelderMeadSimplex']]],
780 ····['evaluateshifttobox_456',·['evaluateShiftToBox',·['../namespacegmx_1_1anonymous__namespace_02com_8cpp_03.xhtml#a68f25f4d5b5426c3ebaf29d7c16dc72f',·1,·'gmx::anonymous_namespace{com.cpp}']]],780 ····['evaluateshifttobox_456',·['evaluateShiftToBox',·['../namespacegmx_1_1anonymous__namespace_02com_8cpp_03.xhtml#a68f25f4d5b5426c3ebaf29d7c16dc72f',·1,·'gmx::anonymous_namespace{com.cpp}']]],
Offset 788, 28 lines modifiedOffset 788, 28 lines modified
788 ····['eventually_462',·['Eventually',·['../namespacegmx.xhtml#a25c6f46e04e2414063d903e5d3133186a42547597779fff433bc3e3670495515d',·1,·'gmx']]],788 ····['eventually_462',·['Eventually',·['../namespacegmx.xhtml#a25c6f46e04e2414063d903e5d3133186a42547597779fff433bc3e3670495515d',·1,·'gmx']]],
789 ····['ewald_20family_20treatments_20of_20long_20ranged_20forces_463',·['Ewald-family·treatments·of·long-ranged·forces',·['../group__module__ewald.xhtml',·1,·'']]],789 ····['ewald_20family_20treatments_20of_20long_20ranged_20forces_463',·['Ewald-family·treatments·of·long-ranged·forces',·['../group__module__ewald.xhtml',·1,·'']]],
790 ····['ewald_2ecpp_464',·['ewald.cpp',·['../ewald_8cpp.xhtml',·1,·'']]],790 ····['ewald_2ecpp_464',·['ewald.cpp',·['../ewald_8cpp.xhtml',·1,·'']]],
791 ····['ewald_2eh_465',·['ewald.h',·['../ewald_8h.xhtml',·1,·'']]],791 ····['ewald_2eh_465',·['ewald.h',·['../ewald_8h.xhtml',·1,·'']]],
792 ····['ewald_5fbeta_466',·['ewald_beta',·['../structgmx_1_1cl__nbparam__params.xhtml#aebff8671e8ef1048a76afe31b6d66dfd',·1,·'gmx::cl_nbparam_params::ewald_beta'],792 ····['ewald_5fbeta_466',·['ewald_beta',·['../structgmx_1_1cl__nbparam__params.xhtml#aebff8671e8ef1048a76afe31b6d66dfd',·1,·'gmx::cl_nbparam_params::ewald_beta'],
793 ········['../structgmx_1_1NBParamGpu.xhtml#aeb27c822a1aaa547944f31428b547b58',·1,·'gmx::NBParamGpu::ewald_beta']793 ········['../structgmx_1_1NBParamGpu.xhtml#aeb27c822a1aaa547944f31428b547b58',·1,·'gmx::NBParamGpu::ewald_beta']
794 ····]],794 ····]],
 795 ····['ewald_5fcharge_5fcorrection_467',·['ewald_charge_correction',·['../ewald_8h.xhtml#a61e28743ca4bd7bfe9808b5636635d18',·1,·'ewald_charge_correction(const·t_commrec·*commrec,·real·epsilonR,·real·ewaldcoeffQ,·gmx::ArrayRef&lt;·const·double·&gt;·qsum,·real·lambda,·const·matrix·box,·real·*dvdlambda,·tensor·vir):&#160;ewald.cpp'],
795 ····['ewald_5fcharge_5fcorrection_467',·['ewald_charge_correction',·['../ewald_8cpp.xhtml#a8a0a55529dc157a801f85016893beda7',·1,·'ewald_charge_correction(const·t_commrec·*commrec,·const·real·epsilonR,·const·real·ewaldcoeffQ,·gmx::ArrayRef&lt;·const·double·&gt;[·...·truncated·by·diffoscope;·len:·91,·SHA:·fad2771133d673c8cd3917a8edf0a2e382c91709367da34740d5ce19cc7d7b2b·...·]796 ········['../ewald_8cpp.xhtml#a8a0a55529dc157a801f85016893beda7',·1,·'ewald_charge_correction(const·t_commrec·*commrec,·const·real·epsilonR,·const·real·ewaldcoeffQ,·gmx::ArrayRef&lt;·const·double·&gt;·qsum,·const·real·lambda,·const·matrix·box,·real·*dvdlambda,[·...·truncated·by·diffoscope;·len:·30,·SHA:·7dfc2546ccc81c38222a24358836feb00b21363461e3c3ded2b08d2fdbdb6d85·...·]
796 ········['../ewald_8h.xhtml#a61e28743ca4bd7bfe9808b5636635d18',·1,·'ewald_charge_correction(const·t_commrec·*commrec,·real·epsilonR,·real·ewaldcoeffQ,·gmx::ArrayRef&lt;·const·double·&gt;·qsum,·real·lambda,·const·matrix·box,·real·*dvdlambda,·tensor·vir):&#160;ewald.cpp'] 
797 ····]],797 ····]],
798 ····['ewald_5flrcorrection_468',·['ewald_LRcorrection',·['../long__range__correction_8h.xhtml#ac557b763e9b0bbcf0ec9663891a46409',·1,·'long_range_correction.cpp']]],798 ····['ewald_5flrcorrection_468',·['ewald_LRcorrection',·['../long__range__correction_8h.xhtml#ac557b763e9b0bbcf0ec9663891a46409',·1,·'long_range_correction.cpp']]],
799 ····['ewald_5fspline3_5ftable_5fscale_469',·['ewald_spline3_table_scale',·['../forcetable_8h.xhtml#afd280d8c41f84d292398f659e619fe35',·1,·'forcetable.cpp']]],799 ····['ewald_5fspline3_5ftable_5fscale_469',·['ewald_spline3_table_scale',·['../forcetable_8h.xhtml#afd280d8c41f84d292398f659e619fe35',·1,·'forcetable.cpp']]],
800 ····['ewald_5futils_2eh_470',·['ewald_utils.h',·['../ewald__utils_8h.xhtml',·1,·'']]],800 ····['ewald_5futils_2eh_470',·['ewald_utils.h',·['../ewald__utils_8h.xhtml',·1,·'']]],
801 ····['ewaldana_471',·['EwaldAna',·['../namespacegmx.xhtml#a9b1e5351eeecaeb1a7f02e83888b3e75abfbab2d060f2dcec3bc55d6f4108fee4',·1,·'gmx']]],801 ····['ewaldana_471',·['EwaldAna',·['../namespacegmx.xhtml#a9b1e5351eeecaeb1a7f02e83888b3e75abfbab2d060f2dcec3bc55d6f4108fee4',·1,·'gmx']]],
802 ····['ewaldanalytical_472',·['EwaldAnalytical',·['../namespacegmx.xhtml#a0f93957d57799d2e5cac00fceb180a99ad0bc9bd64029e8e62669439f419cf30d',·1,·'gmx']]],802 ····['ewaldanalytical_472',·['EwaldAnalytical',·['../namespacegmx.xhtml#a0f93957d57799d2e5cac00fceb180a99ad0bc9bd64029e8e62669439f419cf30d',·1,·'gmx']]],
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51 ····['fep_5fstate_27',·['fep_state',·['../structTpxFileHeader.xhtml#a3e6d181da70f5976a240943c94d74969',·1,·'TpxFileHeader::fep_state'],51 ····['fep_5fstate_27',·['fep_state',·['../structTpxFileHeader.xhtml#a3e6d181da70f5976a240943c94d74969',·1,·'TpxFileHeader::fep_state'],
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55 ····['fep_5fstate_5fb_29',·['FEP_STATE_B',·['../pme__gpu__internal_8h.xhtml#ae6dd68494c14b66f86ff58a5e0a1aa93',·1,·'pme_gpu_internal.h']]],55 ····['fep_5fstate_5fb_29',·['FEP_STATE_B',·['../pme__gpu__internal_8h.xhtml#ae6dd68494c14b66f86ff58a5e0a1aa93',·1,·'pme_gpu_internal.h']]],
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57 ····['fepdimparams_31',·['fepdimparams',·['../structgmx_1_1DimParams_1_1FepDimParams.xhtml',·1,·'gmx::DimParams::FepDimParams'],57 ····['fepdimparams_31',·['fepdimparams',·['../structgmx_1_1DimParams_1_1FepDimParams.xhtml',·1,·'gmx::DimParams::FepDimParams'],
58 ········['../structgmx_1_1DimParams.xhtml#aaddac033528c91ab831c36981ad0bf12',·1,·'gmx::DimParams::fepDimParams()·const']58 ········['../structgmx_1_1DimParams.xhtml#aaddac033528c91ab831c36981ad0bf12',·1,·'gmx::DimParams::fepDimParams()·const']
59 ····]],59 ····]],
60 ····['feplambdadimparams_32',·['fepLambdaDimParams',·['../structgmx_1_1DimParams.xhtml#a7dc64a12c8e1081550e64f355b5a0682',·1,·'gmx::DimParams']]],60 ····['feplambdadimparams_32',·['fepLambdaDimParams',·['../structgmx_1_1DimParams.xhtml#a7dc64a12c8e1081550e64f355b5a0682',·1,·'gmx::DimParams']]],
61 ····['feplambdastate_33',·['fepLambdaState',·['../classgmx_1_1Awh.xhtml#adfc3a70dde1b72c20abe5688cf98d4ba',·1,·'gmx::Awh']]],61 ····['feplambdastate_33',·['fepLambdaState',·['../classgmx_1_1Awh.xhtml#adfc3a70dde1b72c20abe5688cf98d4ba',·1,·'gmx::Awh']]],
62 ····['feplists_34',·['fepLists',·['../classgmx_1_1PairlistSet.xhtml#a2f86424e43ae14d1334dc9485c40b876',·1,·'gmx::PairlistSet']]],62 ····['feplists_34',·['fepLists',·['../classgmx_1_1PairlistSet.xhtml#a2f86424e43ae14d1334dc9485c40b876',·1,·'gmx::PairlistSet']]],
63 ····['fepstatesetting_35',·['FepStateSetting',·['../classgmx_1_1FepStateSetting.xhtml',·1,·'gmx']]],63 ····['fepstatesetting_35',·['FepStateSetting',·['../classgmx_1_1FepStateSetting.xhtml',·1,·'gmx']]],
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64 ····['fepstatevalue_36',·['fepstatevalue',·['../structFEPStateValue.xhtml#a638b5206f78383252ae56f4a257fb922',·1,·'FEPStateValue::FEPStateValue()'],65 ········['../structFEPStateValue.xhtml#a638b5206f78383252ae56f4a257fb922',·1,·'FEPStateValue::FEPStateValue()=default'],
65 ········['../structFEPStateValue.xhtml',·1,·'FEPStateValue&lt;·T·&gt;'],66 ········['../structFEPStateValue.xhtml#ae45c0dca25a0b1b48a68c10767d59483',·1,·'FEPStateValue::FEPStateValue(T·value)'],
66 ········['../structFEPStateValue.xhtml#ad203d2ae99649841dd5ecd72f015167a',·1,·'FEPStateValue::FEPStateValue(T·valueA,·T·valueB)'],67 ········['../structFEPStateValue.xhtml#ad203d2ae99649841dd5ecd72f015167a',·1,·'FEPStateValue::FEPStateValue(T·valueA,·T·valueB)']
67 ········['../structFEPStateValue.xhtml#ae45c0dca25a0b1b48a68c10767d59483',·1,·'FEPStateValue::FEPStateValue(T·value)'] 
68 ····]],68 ····]],
69 ····['fepstatevalue_3c_20nameholder_20_3e_37',·['FEPStateValue&lt;·NameHolder·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],69 ····['fepstatevalue_3c_20nameholder_20_3e_37',·['FEPStateValue&lt;·NameHolder·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],
70 ····['fepstatevalue_3c_20real_20_3e_38',·['FEPStateValue&lt;·real·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],70 ····['fepstatevalue_3c_20real_20_3e_38',·['FEPStateValue&lt;·real·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],
71 ····['fepstatevalue_3c_20unsigned_20short_20_3e_39',·['FEPStateValue&lt;·unsigned·short·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],71 ····['fepstatevalue_3c_20unsigned_20short_20_3e_39',·['FEPStateValue&lt;·unsigned·short·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],
72 ····['fetchcoulombforcer_40',·['fetchCoulombForceR',·['../namespacegmx.xhtml#af4358df7df7ec8c2d2ad3014049c9ff0',·1,·'gmx']]],72 ····['fetchcoulombforcer_40',·['fetchCoulombForceR',·['../namespacegmx.xhtml#af4358df7df7ec8c2d2ad3014049c9ff0',·1,·'gmx']]],
73 ····['fetchfromparamlookuptable_41',·['fetchFromParamLookupTable',·['../hip__kernel__utils_8h.xhtml#a7ad14d6bc00ea67ddd8c5435c07a8881',·1,·'hip_kernel_utils.h']]],73 ····['fetchfromparamlookuptable_41',·['fetchFromParamLookupTable',·['../hip__kernel__utils_8h.xhtml#a7ad14d6bc00ea67ddd8c5435c07a8881',·1,·'hip_kernel_utils.h']]],
74 ····['fetchnextevent_42',·['fetchnextevent',·['../classGpuRegionTimerImpl.xhtml#ace9b9965e5b0dec64d5d74af36035a63',·1,·'GpuRegionTimerImpl::fetchNextEvent()'],74 ····['fetchnextevent_42',·['fetchnextevent',·['../classGpuRegionTimerImpl.xhtml#ace9b9965e5b0dec64d5d74af36035a63',·1,·'GpuRegionTimerImpl::fetchNextEvent()'],
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96 ····['fftbackend_62',·['FftBackend',·['../namespacegmx.xhtml#aad56f475765c1a78ee7f33e143e717bb',·1,·'gmx']]],96 ····['fftbackend_62',·['FftBackend',·['../namespacegmx.xhtml#aad56f475765c1a78ee7f33e143e717bb',·1,·'gmx']]],
97 ····['fftdirection_63',·['FftDirection',·['../namespacegmx.xhtml#a3b8adf5cda6c87a7130079f61f4b7e72',·1,·'gmx']]],97 ····['fftdirection_63',·['FftDirection',·['../namespacegmx.xhtml#a3b8adf5cda6c87a7130079f61f4b7e72',·1,·'gmx']]],
98 ····['fftsetup_64',·['fftSetup',·['../structPmeGpuSpecific.xhtml#aad82d2b99a94ed427226076d786a5886',·1,·'PmeGpuSpecific']]],98 ····['fftsetup_64',·['fftSetup',·['../structPmeGpuSpecific.xhtml#aad82d2b99a94ed427226076d786a5886',·1,·'PmeGpuSpecific']]],
99 ····['ffwrite_65',·['ffWRITE',·['../group__module__commandline.xhtml#ga7631b25f5be9959c84dd7acc96bc04dd',·1,·'filenm.h']]],99 ····['ffwrite_65',·['ffWRITE',·['../group__module__commandline.xhtml#ga7631b25f5be9959c84dd7acc96bc04dd',·1,·'filenm.h']]],
100 ····['ffwrmult_66',·['ffWRMULT',·['../group__module__commandline.xhtml#ga0a9ba9e80fcdc4a36537189bf0b2e092',·1,·'filenm.h']]],100 ····['ffwrmult_66',·['ffWRMULT',·['../group__module__commandline.xhtml#ga0a9ba9e80fcdc4a36537189bf0b2e092',·1,·'filenm.h']]],
101 ····['fgets2_67',·['fgets2',·['../cstringutil_8h.xhtml#a1fcfed3fad308bcf16440a6712bf3bb6',·1,·'cstringutil.cpp']]],101 ····['fgets2_67',·['fgets2',·['../cstringutil_8h.xhtml#a1fcfed3fad308bcf16440a6712bf3bb6',·1,·'cstringutil.cpp']]],
102 ····['fgets3_68',·['fgets3',·['../gmx__wham_8cpp.xhtml#ac2c0038d4b482362a1568f5b08767b6b',·1,·'gmx_wham.cpp']]],102 ····['fgets3_68',·['fgets3',·['../gmx__wham_8cpp.xhtml#ac2c0038d4b482362a1568f5b08767b6b',·1,·'gmx_wham.cpp']]],
 103 ····['file_69',·['file',·['../structgmx_1_1ThrowLocation.xhtml#a8346a1ead40423ed29d2f2786ad80a80',·1,·'gmx::ThrowLocation::file'],
103 ····['file_69',·['file',·['../namespacegmx_1_1test.xhtml#a5b76a571a22b4c47f7dab283e6674154a0b27918290ff5323bea1e3b78a9cf04e',·1,·'gmx::test::File'],104 ········['../namespacegmx_1_1test.xhtml#a5b76a571a22b4c47f7dab283e6674154a0b27918290ff5323bea1e3b78a9cf04e',·1,·'gmx::test::File']
104 ········['../structgmx_1_1ThrowLocation.xhtml#a8346a1ead40423ed29d2f2786ad80a80',·1,·'gmx::ThrowLocation::file'] 
105 ····]],105 ····]],
106 ····['file_20organization_70',·['File·organization',·['../page_simd.xhtml#autotoc_md58',·1,·'']]],106 ····['file_20organization_70',·['File·organization',·['../page_simd.xhtml#autotoc_md58',·1,·'']]],
107 ····['file_5f_71',·['file_',·['../classgmx_1_1HelpWriterContext_1_1Impl_1_1SharedState.xhtml#ac3ef14a847add39489a2807ec25a4706',·1,·'gmx::HelpWriterContext::Impl::SharedState']]],107 ····['file_5f_71',·['file_',·['../classgmx_1_1HelpWriterContext_1_1Impl_1_1SharedState.xhtml#ac3ef14a847add39489a2807ec25a4706',·1,·'gmx::HelpWriterContext::Impl::SharedState']]],
108 ····['file_5fversion_72',·['file_version',·['../structCheckpointHeaderContents.xhtml#aa30be23ce197759be9ace7e076d116bf',·1,·'CheckpointHeaderContents']]],108 ····['file_5fversion_72',·['file_version',·['../structCheckpointHeaderContents.xhtml#aa30be23ce197759be9ace7e076d116bf',·1,·'CheckpointHeaderContents']]],
109 ····['filebase_73',·['filebase',·['../structPreprocessResidue.xhtml#ae814d77fe9dc87042f21aacc06cadbcf',·1,·'PreprocessResidue::filebase'], 
110 ········['../structMoleculePatchDatabase.xhtml#ae19967539edd91c420f87eb820136971',·1,·'MoleculePatchDatabase::filebase']109 ····['filebase_73',·['filebase',·['../structMoleculePatchDatabase.xhtml#ae19967539edd91c420f87eb820136971',·1,·'MoleculePatchDatabase::filebase'],
 110 ········['../structPreprocessResidue.xhtml#ae814d77fe9dc87042f21aacc06cadbcf',·1,·'PreprocessResidue::filebase']
111 ····]],111 ····]],
112 ····['fileexists_74',·['fileexists',·['../classgmx_1_1test_1_1TestFileInputRedirector.xhtml#a0e57297bb9ca78465d3d1fab981edc52',·1,·'gmx::test::TestFileInputRedirector::fileExists()'],112 ····['fileexists_74',·['fileexists',·['../classgmx_1_1test_1_1TestFileInputRedirector.xhtml#a0e57297bb9ca78465d3d1fab981edc52',·1,·'gmx::test::TestFileInputRedirector::fileExists()'],
113 ········['../classgmx_1_1IFileInputRedirector.xhtml#ada681906817a3597190bc682ebd3dfe0',·1,·'gmx::IFileInputRedirector::fileExists()'],113 ········['../classgmx_1_1IFileInputRedirector.xhtml#ada681906817a3597190bc682ebd3dfe0',·1,·'gmx::IFileInputRedirector::fileExists()'],
114 ········['../classgmx_1_1anonymous__namespace_02fileredirector_8cpp_03_1_1DefaultInputRedirector.xhtml#a9f8e883f93e991222d5d6090ea789831',·1,·'gmx::anonymous_namespace{fileredirector.cpp}::DefaultInputRedirector::fileExists()']114 ········['../classgmx_1_1anonymous__namespace_02fileredirector_8cpp_03_1_1DefaultInputRedirector.xhtml#a9f8e883f93e991222d5d6090ea789831',·1,·'gmx::anonymous_namespace{fileredirector.cpp}::DefaultInputRedirector::fileExists()']
115 ····]],115 ····]],
116 ····['filegeneration_75',·['fileGeneration',·['../structTpxFileHeader.xhtml#a84a10ca670608eb96c039d20d61e334b',·1,·'TpxFileHeader']]],116 ····['filegeneration_75',·['fileGeneration',·['../structTpxFileHeader.xhtml#a84a10ca670608eb96c039d20d61e334b',·1,·'TpxFileHeader']]],
117 ····['fileindex_76',·['fileIndex',·['../classgmx_1_1EnergyTerm.xhtml#ab4c81c07ccaef47d2bcf6dcee4b921ac',·1,·'gmx::EnergyTerm']]],117 ····['fileindex_76',·['fileIndex',·['../classgmx_1_1EnergyTerm.xhtml#ab4c81c07ccaef47d2bcf6dcee4b921ac',·1,·'gmx::EnergyTerm']]],
 118 ····['fileioerror_77',·['fileioerror',·['../classgmx_1_1FileIOError.xhtml',·1,·'gmx::FileIOError'],
118 ····['fileioerror_77',·['fileioerror',·['../classgmx_1_1FileIOError.xhtml#a24a714cd22c57b8cb91fa2c5f37fafe9',·1,·'gmx::FileIOError::FileIOError()'],119 ········['../classgmx_1_1FileIOError.xhtml#a24a714cd22c57b8cb91fa2c5f37fafe9',·1,·'gmx::FileIOError::FileIOError()']
119 ········['../classgmx_1_1FileIOError.xhtml',·1,·'gmx::FileIOError'] 
120 ····]],120 ····]],
 121 ····['fileioxdrserializer_78',·['fileioxdrserializer',·['../classgmx_1_1FileIOXdrSerializer.xhtml',·1,·'gmx::FileIOXdrSerializer'],
121 ····['fileioxdrserializer_78',·['fileioxdrserializer',·['../classgmx_1_1FileIOXdrSerializer.xhtml#a91b67e0ad48c2cb8908fbd70bfcb61ed',·1,·'gmx::FileIOXdrSerializer::FileIOXdrSerializer()'],122 ········['../classgmx_1_1FileIOXdrSerializer.xhtml#a91b67e0ad48c2cb8908fbd70bfcb61ed',·1,·'gmx::FileIOXdrSerializer::FileIOXdrSerializer()']
122 ········['../classgmx_1_1FileIOXdrSerializer.xhtml',·1,·'gmx::FileIOXdrSerializer'] 
123 ····]],123 ····]],
124 ····['fileioxdrserializer_2ecpp_79',·['fileioxdrserializer.cpp',·['../fileioxdrserializer_8cpp.xhtml',·1,·'']]],124 ····['fileioxdrserializer_2ecpp_79',·['fileioxdrserializer.cpp',·['../fileioxdrserializer_8cpp.xhtml',·1,·'']]],
125 ····['filemanager_80',·['fileManager',·['../classgmx_1_1test_1_1CommandLineTestBase.xhtml#a5899f9f12453f75da2a4af840a1c4b59',·1,·'gmx::test::CommandLineTestBase']]],125 ····['filemanager_80',·['fileManager',·['../classgmx_1_1test_1_1CommandLineTestBase.xhtml#a5899f9f12453f75da2a4af840a1c4b59',·1,·'gmx::test::CommandLineTestBase']]],
126 ····['filemanager_5f_81',·['filemanager_',·['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a6739c595dc4466b69220fdf1dfbe3d71',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest::fileManager_'],126 ····['filemanager_5f_81',·['filemanager_',·['../classgmx_1_1test_1_1anonymous__namespace_02energyoutput_8cpp_03_1_1EnergyOutputTest.xhtml#a6739c595dc4466b69220fdf1dfbe3d71',·1,·'gmx::test::anonymous_namespace{energyoutput.cpp}::EnergyOutputTest::fileManager_'],
127 ········['../classgmx_1_1test_1_1MultiSimTest.xhtml#a00ccab41b824db52825528838326ae91',·1,·'gmx::test::MultiSimTest::fileManager_'], 
128 ········['../classgmx_1_1test_1_1MdrunTestFixture.xhtml#a2141d1eeae99b891fdd4aabc9de3dccb',·1,·'gmx::test::MdrunTestFixture::fileManager_']127 ········['../classgmx_1_1test_1_1MdrunTestFixture.xhtml#a2141d1eeae99b891fdd4aabc9de3dccb',·1,·'gmx::test::MdrunTestFixture::fileManager_'],
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129 ····]],129 ····]],
130 ····['filematcherpointer_82',·['FileMatcherPointer',·['../namespacegmx_1_1test.xhtml#a96729fee4a52b37c0ae0784af1e9eaa3',·1,·'gmx::test']]],130 ····['filematcherpointer_82',·['FileMatcherPointer',·['../namespacegmx_1_1test.xhtml#a96729fee4a52b37c0ae0784af1e9eaa3',·1,·'gmx::test']]],
131 ····['filematchers_2ecpp_83',·['filematchers.cpp',·['../filematchers_8cpp.xhtml',·1,·'']]],131 ····['filematchers_2ecpp_83',·['filematchers.cpp',·['../filematchers_8cpp.xhtml',·1,·'']]],
132 ····['filematchers_2eh_84',·['filematchers.h',·['../filematchers_8h.xhtml',·1,·'']]],132 ····['filematchers_2eh_84',·['filematchers.h',·['../filematchers_8h.xhtml',·1,·'']]],
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1270 ····]],1270 ····]],
1271 ····['gmx_5fis_5fx86_5f32_910',·['GMX_IS_X86_32',·['../architecture_8h.xhtml#a965bb789642e63d96bbba0c303109a68',·1,·'architecture.h']]],1271 ····['gmx_5fis_5fx86_5f32_910',·['GMX_IS_X86_32',·['../architecture_8h.xhtml#a965bb789642e63d96bbba0c303109a68',·1,·'architecture.h']]],
1272 ····['gmx_5fis_5fx86_5f64_911',·['GMX_IS_X86_64',·['../architecture_8h.xhtml#a5049871d3b2298b99b58e3663ee8cd49',·1,·'architecture.h']]],1272 ····['gmx_5fis_5fx86_5f64_911',·['GMX_IS_X86_64',·['../architecture_8h.xhtml#a5049871d3b2298b99b58e3663ee8cd49',·1,·'architecture.h']]],
1273 ····['gmx_5fkernel_5ftiming_5fdata_5ft_912',·['gmx_kernel_timing_data_t',·['../structgmx__kernel__timing__data__t.xhtml',·1,·'']]],1273 ····['gmx_5fkernel_5ftiming_5fdata_5ft_912',·['gmx_kernel_timing_data_t',·['../structgmx__kernel__timing__data__t.xhtml',·1,·'']]],
1274 ····['gmx_5flapack_2eh_913',·['gmx_lapack.h',·['../gmx__lapack_8h.xhtml',·1,·'']]],1274 ····['gmx_5flapack_2eh_913',·['gmx_lapack.h',·['../gmx__lapack_8h.xhtml',·1,·'']]],
1275 ····['gmx_5flmcurve_2ecpp_914',·['gmx_lmcurve.cpp',·['../gmx__lmcurve_8cpp.xhtml',·1,·'']]],1275 ····['gmx_5flmcurve_2ecpp_914',·['gmx_lmcurve.cpp',·['../gmx__lmcurve_8cpp.xhtml',·1,·'']]],
1276 ····['gmx_5flmcurve_2eh_915',·['gmx_lmcurve.h',·['../gmx__lmcurve_8h.xhtml',·1,·'']]],1276 ····['gmx_5flmcurve_2eh_915',·['gmx_lmcurve.h',·['../gmx__lmcurve_8h.xhtml',·1,·'']]],
1277 ····['gmx_5flocaltop_5ft_916',·['gmx_localtop_t',·['../structgmx__localtop__t.xhtml',·1,·'gmx_localtop_t'], 
1278 ········['../structgmx__localtop__t.xhtml#a2f121c6b35f3d2084cfe4ec5bf591d50',·1,·'gmx_localtop_t::gmx_localtop_t()']1277 ····['gmx_5flocaltop_5ft_916',·['gmx_localtop_t',·['../structgmx__localtop__t.xhtml#a2f121c6b35f3d2084cfe4ec5bf591d50',·1,·'gmx_localtop_t::gmx_localtop_t()'],
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1279 ····]],1279 ····]],
1280 ····['gmx_5flog_917',·['GMX_LOG',·['../group__module__utility.xhtml#gae729bb685d65e62bab6be8c4fe02ae87',·1,·'logger.h']]],1280 ····['gmx_5flog_917',·['GMX_LOG',·['../group__module__utility.xhtml#gae729bb685d65e62bab6be8c4fe02ae87',·1,·'logger.h']]],
1281 ····['gmx_5fmaketables_5f14only_918',·['GMX_MAKETABLES_14ONLY',·['../forcetable_8h.xhtml#a262e67f146de0f1c633369c5a83e0143',·1,·'forcetable.h']]],1281 ····['gmx_5fmaketables_5f14only_918',·['GMX_MAKETABLES_14ONLY',·['../forcetable_8h.xhtml#a262e67f146de0f1c633369c5a83e0143',·1,·'forcetable.h']]],
1282 ····['gmx_5fmaketables_5fforceuser_919',·['GMX_MAKETABLES_FORCEUSER',·['../forcetable_8h.xhtml#ace31315b29cf61f66321946e6ac7a140',·1,·'forcetable.h']]],1282 ····['gmx_5fmaketables_5fforceuser_919',·['GMX_MAKETABLES_FORCEUSER',·['../forcetable_8h.xhtml#ace31315b29cf61f66321946e6ac7a140',·1,·'forcetable.h']]],
1283 ····['gmx_5fmany_5ffft_5fdestroy_920',·['gmx_many_fft_destroy',·['../fft_8h.xhtml#a77912d06d42876247642873eb98a523d',·1,·'fft.cpp']]],1283 ····['gmx_5fmany_5ffft_5fdestroy_920',·['gmx_many_fft_destroy',·['../fft_8h.xhtml#a77912d06d42876247642873eb98a523d',·1,·'fft.cpp']]],
1284 ····['gmx_5fmdrun_921',·['gmx_mdrun',·['../namespacegmx.xhtml#ac0404a0a89f646b81b966ace5810944d',·1,·'gmx::gmx_mdrun(MPI_Comm·communicator,·const·gmx_hw_info_t·&amp;hwinfo,·int·argc,·char·*argv[])'],1284 ····['gmx_5fmdrun_921',·['gmx_mdrun',·['../namespacegmx.xhtml#ac0404a0a89f646b81b966ace5810944d',·1,·'gmx::gmx_mdrun(MPI_Comm·communicator,·const·gmx_hw_info_t·&amp;hwinfo,·int·argc,·char·*argv[])'],
1285 ········['../namespacegmx.xhtml#a4a29b533acb47eb890641baab3fc0468',·1,·'gmx::gmx_mdrun(int·argc,·char·*argv[])']1285 ········['../namespacegmx.xhtml#a4a29b533acb47eb890641baab3fc0468',·1,·'gmx::gmx_mdrun(int·argc,·char·*argv[])']
Offset 1289, 16 lines modifiedOffset 1289, 16 lines modified
1289 ····['gmx_5fmoltype_5ft_924',·['gmx_moltype_t',·['../structgmx__moltype__t.xhtml',·1,·'gmx_moltype_t'],1289 ····['gmx_5fmoltype_5ft_924',·['gmx_moltype_t',·['../structgmx__moltype__t.xhtml',·1,·'gmx_moltype_t'],
1290 ········['../structgmx__moltype__t.xhtml#a49862bbe7823fc1fc73c37a0f3619fef',·1,·'gmx_moltype_t::gmx_moltype_t()']1290 ········['../structgmx__moltype__t.xhtml#a49862bbe7823fc1fc73c37a0f3619fef',·1,·'gmx_moltype_t::gmx_moltype_t()']
1291 ····]],1291 ····]],
1292 ····['gmx_5fmpi_5finitialized_925',·['gmx_mpi_initialized',·['../basenetwork_8h.xhtml#a0be63511ea9391dd2049b56d43a9e6a1',·1,·'basenetwork.cpp']]],1292 ····['gmx_5fmpi_5finitialized_925',·['gmx_mpi_initialized',·['../basenetwork_8h.xhtml#a0be63511ea9391dd2049b56d43a9e6a1',·1,·'basenetwork.cpp']]],
1293 ····['gmx_5fmpi_5freal_926',·['GMX_MPI_REAL',·['../real_8h.xhtml#ae18e2415b9611d106ac74cc16db021db',·1,·'real.h']]],1293 ····['gmx_5fmpi_5freal_926',·['GMX_MPI_REAL',·['../real_8h.xhtml#ae18e2415b9611d106ac74cc16db021db',·1,·'real.h']]],
1294 ····['gmx_5fmpi_5ftest_927',·['GMX_MPI_TEST',·['../group__module__testutils.xhtml#gafbc53c38b8ac829c402d849bfcc33bd5',·1,·'mpitest.h']]],1294 ····['gmx_5fmpi_5ftest_927',·['GMX_MPI_TEST',·['../group__module__testutils.xhtml#gafbc53c38b8ac829c402d849bfcc33bd5',·1,·'mpitest.h']]],
1295 ····['gmx_5fmpi_5ftest_5finner_928',·['GMX_MPI_TEST_INNER',·['../mpitest_8h.xhtml#ab9cff9e4704809e3294c7d541bb97629',·1,·'mpitest.h']]],1295 ····['gmx_5fmpi_5ftest_5finner_928',·['GMX_MPI_TEST_INNER',·['../mpitest_8h.xhtml#ab9cff9e4704809e3294c7d541bb97629',·1,·'mpitest.h']]],
 1296 ····['gmx_5fmultisim_5ft_929',·['gmx_multisim_t',·['../structgmx__multisim__t.xhtml',·1,·'gmx_multisim_t'],
1296 ····['gmx_5fmultisim_5ft_929',·['gmx_multisim_t',·['../structgmx__multisim__t.xhtml#ac1f27c4a7eda351db996870f9e34265a',·1,·'gmx_multisim_t::gmx_multisim_t()'],1297 ········['../structgmx__multisim__t.xhtml#ac1f27c4a7eda351db996870f9e34265a',·1,·'gmx_multisim_t::gmx_multisim_t()']
1297 ········['../structgmx__multisim__t.xhtml',·1,·'gmx_multisim_t'] 
1298 ····]],1298 ····]],
1299 ····['gmx_5fnbnxm_5fenable_5fpacked_5ffloat3_930',·['GMX_NBNXM_ENABLE_PACKED_FLOAT3',·['../nbnxm__sycl__kernel__body_8h.xhtml#ad54c701a0649f77d7b9d54c4aaf437a6',·1,·'nbnxm_sycl_kernel_body.h']]],1299 ····['gmx_5fnbnxm_5fenable_5fpacked_5ffloat3_930',·['GMX_NBNXM_ENABLE_PACKED_FLOAT3',·['../nbnxm__sycl__kernel__body_8h.xhtml#ad54c701a0649f77d7b9d54c4aaf437a6',·1,·'nbnxm_sycl_kernel_body.h']]],
1300 ····['gmx_5fnbnxn_5fprune_5fkernel_5fjpacked_5fconcurrency_931',·['gmx_nbnxn_prune_kernel_jpacked_concurrency',·['../nbnxm__ocl__consts_8h.xhtml#a8b5794d7c4cf16c945fa83089717d210',·1,·'GMX_NBNXN_PRUNE_KERNEL_JPACKED_CONCURRENCY:&#160;nbnxm_ocl_consts.h'],1300 ····['gmx_5fnbnxn_5fprune_5fkernel_5fjpacked_5fconcurrency_931',·['gmx_nbnxn_prune_kernel_jpacked_concurrency',·['../nbnxm__ocl__consts_8h.xhtml#a8b5794d7c4cf16c945fa83089717d210',·1,·'GMX_NBNXN_PRUNE_KERNEL_JPACKED_CONCURRENCY:&#160;nbnxm_ocl_consts.h'],
1301 ········['../gpu__types__common_8h.xhtml#a8b5794d7c4cf16c945fa83089717d210',·1,·'GMX_NBNXN_PRUNE_KERNEL_JPACKED_CONCURRENCY:&#160;gpu_types_common.h']1301 ········['../gpu__types__common_8h.xhtml#a8b5794d7c4cf16c945fa83089717d210',·1,·'GMX_NBNXN_PRUNE_KERNEL_JPACKED_CONCURRENCY:&#160;gpu_types_common.h']
1302 ····]],1302 ····]],
1303 ····['gmx_5fno_5fwcmatch_932',·['GMX_NO_WCMATCH',·['../cstringutil_8h.xhtml#a21836ee214b24d91bf3911c0d99f707b',·1,·'cstringutil.h']]],1303 ····['gmx_5fno_5fwcmatch_932',·['GMX_NO_WCMATCH',·['../cstringutil_8h.xhtml#a21836ee214b24d91bf3911c0d99f707b',·1,·'cstringutil.h']]],
1304 ····['gmx_5fnode_5fnum_933',·['gmx_node_num',·['../basenetwork_8h.xhtml#a14a308edeb82077575a8920de4c89fc8',·1,·'basenetwork.cpp']]],1304 ····['gmx_5fnode_5fnum_933',·['gmx_node_num',·['../basenetwork_8h.xhtml#a14a308edeb82077575a8920de4c89fc8',·1,·'basenetwork.cpp']]],
Offset 1323, 37 lines modifiedOffset 1323, 37 lines modified
1323 ········['../pme_8h.xhtml#af28e0ce531d0251546501a7f192f25f2',·1,·'gmx_pme_calc_energy(gmx_pme_t·*pme,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x,·gmx::ArrayRef&lt;·const·real·&gt;·q):&#160;pme.cpp']1323 ········['../pme_8h.xhtml#af28e0ce531d0251546501a7f192f25f2',·1,·'gmx_pme_calc_energy(gmx_pme_t·*pme,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x,·gmx::ArrayRef&lt;·const·real·&gt;·q):&#160;pme.cpp']
1324 ····]],1324 ····]],
1325 ····['gmx_5fpme_5fcheck_5frestrictions_944',·['gmx_pme_check_restrictions',·['../pme_8cpp.xhtml#a5c4fecfcddcabc83d73c85042c935f96',·1,·'gmx_pme_check_restrictions(int·pme_order,·int·nkx,·int·nky,·int·nkz,·int·numPmeDomainsAlongX,·int·numPmeDomainsAlongY,·int·extendedHaloRegion,·bool·useGpuPme,·bool·useThreads,·bool·errorsAreFatal):&#160;pme.cpp'],1325 ····['gmx_5fpme_5fcheck_5frestrictions_944',·['gmx_pme_check_restrictions',·['../pme_8cpp.xhtml#a5c4fecfcddcabc83d73c85042c935f96',·1,·'gmx_pme_check_restrictions(int·pme_order,·int·nkx,·int·nky,·int·nkz,·int·numPmeDomainsAlongX,·int·numPmeDomainsAlongY,·int·extendedHaloRegion,·bool·useGpuPme,·bool·useThreads,·bool·errorsAreFatal):&#160;pme.cpp'],
1326 ········['../pme_8h.xhtml#a5c4fecfcddcabc83d73c85042c935f96',·1,·'gmx_pme_check_restrictions(int·pme_order,·int·nkx,·int·nky,·int·nkz,·int·numPmeDomainsAlongX,·int·numPmeDomainsAlongY,·int·extendedHaloRegion,·bool·useGpuPme,·bool·useThreads,·bool·errorsAreFatal):&#160;pme.cpp']1326 ········['../pme_8h.xhtml#a5c4fecfcddcabc83d73c85042c935f96',·1,·'gmx_pme_check_restrictions(int·pme_order,·int·nkx,·int·nky,·int·nkz,·int·numPmeDomainsAlongX,·int·numPmeDomainsAlongY,·int·extendedHaloRegion,·bool·useGpuPme,·bool·useThreads,·bool·errorsAreFatal):&#160;pme.cpp']
1327 ····]],1327 ····]],
1328 ····['gmx_5fpme_5fcomm_5fn_5fbox_5ft_945',·['gmx_pme_comm_n_box_t',·['../structgmx__pme__comm__n__box__t.xhtml',·1,·'']]],1328 ····['gmx_5fpme_5fcomm_5fn_5fbox_5ft_945',·['gmx_pme_comm_n_box_t',·['../structgmx__pme__comm__n__box__t.xhtml',·1,·'']]],
1329 ····['gmx_5fpme_5fcomm_5fvir_5fene_5ft_946',·['gmx_pme_comm_vir_ene_t',·['../structgmx__pme__comm__vir__ene__t.xhtml',·1,·'']]],1329 ····['gmx_5fpme_5fcomm_5fvir_5fene_5ft_946',·['gmx_pme_comm_vir_ene_t',·['../structgmx__pme__comm__vir__ene__t.xhtml',·1,·'']]],
1330 ····['gmx_5fpme_5fdestroy_947',·['gmx_pme_destroy',·['../pme_8h.xhtml#afb9db2681fc072d6b4176febca9831c6',·1,·'gmx_pme_destroy(gmx_pme_t·*pme,·bool·destroyGpuData):&#160;pme.cpp'], 
1331 ········['../pme_8h.xhtml#ac5a75a2d477885fcb0260908f6e7b2f2',·1,·'gmx_pme_destroy(gmx_pme_t·*pme):&#160;pme.cpp'],1330 ····['gmx_5fpme_5fdestroy_947',·['gmx_pme_destroy',·['../pme_8cpp.xhtml#ac5a75a2d477885fcb0260908f6e7b2f2',·1,·'gmx_pme_destroy(gmx_pme_t·*pme):&#160;pme.cpp'],
1332 ········['../pme_8cpp.xhtml#afb9db2681fc072d6b4176febca9831c6',·1,·'gmx_pme_destroy(gmx_pme_t·*pme,·bool·destroyGpuData):&#160;pme.cpp'],1331 ········['../pme_8cpp.xhtml#afb9db2681fc072d6b4176febca9831c6',·1,·'gmx_pme_destroy(gmx_pme_t·*pme,·bool·destroyGpuData):&#160;pme.cpp'],
1333 ········['../pme_8cpp.xhtml#ac5a75a2d477885fcb0260908f6e7b2f2',·1,·'gmx_pme_destroy(gmx_pme_t·*pme):&#160;pme.cpp']1332 ········['../pme_8h.xhtml#ac5a75a2d477885fcb0260908f6e7b2f2',·1,·'gmx_pme_destroy(gmx_pme_t·*pme):&#160;pme.cpp'],
 1333 ········['../pme_8h.xhtml#afb9db2681fc072d6b4176febca9831c6',·1,·'gmx_pme_destroy(gmx_pme_t·*pme,·bool·destroyGpuData):&#160;pme.cpp']
1334 ····]],1334 ····]],
1335 ····['gmx_5fpme_5fdo_948',·['gmx_pme_do',·['../pme_8h.xhtml#ae9d5a3c227bbe220bd732be51ec92d9b',·1,·'gmx_pme_do(struct·gmx_pme_t·*pme,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·coordinates,·gmx::ArrayRef&lt;·gmx::RVec·&gt;·forces,·gmx::ArrayRef&lt;·const·real·&gt;·chargeA,·gmx::ArrayRef&lt;·const·real·&gt;·chargeB,·gmx::ArrayRef&lt;·const·real·&gt;·c6A,·gmx::ArrayRef&lt;·const·real·&gt;·c6B,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaA,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaB,·const·matrix·box,·const·t_commrec·*cr,·int·maxshift_x,·int·maxshift_y,·t_nrnb·*nrnb,·gmx_wallcycle·*wcycle,·matrix·vir_q,·matrix·vir_lj,·real·*energy_q,·real·*energy_lj,·real·lambda_q,·real·lambda_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·const·gmx::StepWorkload·&amp;stepWork):&#160;pme.cpp'],1335 ····['gmx_5fpme_5fdo_948',·['gmx_pme_do',·['../pme_8cpp.xhtml#ae9d5a3c227bbe220bd732be51ec92d9b',·1,·'gmx_pme_do(struct·gmx_pme_t·*pme,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·coordinates,·gmx::ArrayRef&lt;·gmx::RVec·&gt;·forces,·gmx::ArrayRef&lt;·const·real·&gt;·chargeA,·gmx::ArrayRef&lt;·const·real·&gt;·chargeB,·gmx::ArrayRef&lt;·const·real·&gt;·c6A,·gmx::ArrayRef&lt;·const·real·&gt;·c6B,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaA,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaB,·const·matrix·box,·const·t_commrec·*cr,·int·maxshift_x,·int·maxshift_y,·t_nrnb·*nrnb,·gmx_wallcycle·*wcycle,·matrix·vir_q,·matrix·vir_lj,·real·*energy_q,·real·*energy_lj,·real·lambda_q,·real·lambda_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·const·gmx::StepWorkload·&amp;stepWork):&#160;pme.cpp'],
1336 ········['../pme_8cpp.xhtml#ae9d5a3c227bbe220bd732be51ec92d9b',·1,·'gmx_pme_do(struct·gmx_pme_t·*pme,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·coordinates,·gmx::ArrayRef&lt;·gmx::RVec·&gt;·forces,·gmx::ArrayRef&lt;·const·real·&gt;·chargeA,·gmx::ArrayRef&lt;·const·real·&gt;·chargeB,·gmx::ArrayRef&lt;·const·real·&gt;·c6A,·gmx::ArrayRef&lt;·const·real·&gt;·c6B,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaA,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaB,·const·matrix·box,·const·t_commrec·*cr,·int·maxshift_x,·int·maxshift_y,·t_nrnb·*nrnb,·gmx_wallcycle·*wcycle,·matrix·vir_q,·matrix·vir_lj,·real·*energy_q,·real·*energy_lj,·real·lambda_q,·real·lambda_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·const·gmx::StepWorkload·&amp;stepWork):&#160;pme.cpp']1336 ········['../pme_8h.xhtml#ae9d5a3c227bbe220bd732be51ec92d9b',·1,·'gmx_pme_do(struct·gmx_pme_t·*pme,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·coordinates,·gmx::ArrayRef&lt;·gmx::RVec·&gt;·forces,·gmx::ArrayRef&lt;·const·real·&gt;·chargeA,·gmx::ArrayRef&lt;·const·real·&gt;·chargeB,·gmx::ArrayRef&lt;·const·real·&gt;·c6A,·gmx::ArrayRef&lt;·const·real·&gt;·c6B,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaA,·gmx::ArrayRef&lt;·const·real·&gt;·sigmaB,·const·matrix·box,·const·t_commrec·*cr,·int·maxshift_x,·int·maxshift_y,·t_nrnb·*nrnb,·gmx_wallcycle·*wcycle,·matrix·vir_q,·matrix·vir_lj,·real·*energy_q,·real·*energy_lj,·real·lambda_q,·real·lambda_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·const·gmx::StepWorkload·&amp;stepWork):&#160;pme.cpp']
1337 ····]],1337 ····]],
1338 ····['gmx_5fpme_5fgrid_5fmatches_949',·['gmx_pme_grid_matches',·['../pme_8cpp.xhtml#a90e8466d51fc7f91409cce40287f1d14',·1,·'gmx_pme_grid_matches(const·gmx_pme_t·&amp;pme,·const·ivec·grid_size):&#160;pme.cpp'],1338 ····['gmx_5fpme_5fgrid_5fmatches_949',·['gmx_pme_grid_matches',·['../pme_8h.xhtml#a90e8466d51fc7f91409cce40287f1d14',·1,·'gmx_pme_grid_matches(const·gmx_pme_t·&amp;pme,·const·ivec·grid_size):&#160;pme.cpp'],
1339 ········['../pme_8h.xhtml#a90e8466d51fc7f91409cce40287f1d14',·1,·'gmx_pme_grid_matches(const·gmx_pme_t·&amp;pme,·const·ivec·grid_size):&#160;pme.cpp']1339 ········['../pme_8cpp.xhtml#a90e8466d51fc7f91409cce40287f1d14',·1,·'gmx_pme_grid_matches(const·gmx_pme_t·&amp;pme,·const·ivec·grid_size):&#160;pme.cpp']
1340 ····]],1340 ····]],
1341 ····['gmx_5fpme_5finit_950',·['gmx_pme_init',·['../pme_8cpp.xhtml#a39e800d9a258e0c8a553fa7b71e10dcf',·1,·'gmx_pme_init(const·t_commrec·*cr,·const·NumPmeDomains·&amp;numPmeDomains,·const·t_inputrec·*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode,·PmeGpu·*pmeGpu,·const·DeviceContext·*deviceContext,·const·DeviceStream·*deviceStream,·const·PmeGpuProgram·*pmeGpuProgram,·const·gmx::MDLogger·&amp;mdlog,·std::shared_ptr&lt;·PmeGridsStorage·&gt;·pmeGridsStoragePtr):&#160;pme.cpp'],1341 ····['gmx_5fpme_5finit_950',·['gmx_pme_init',·['../pme_8h.xhtml#a39e800d9a258e0c8a553fa7b71e10dcf',·1,·'gmx_pme_init(const·t_commrec·*cr,·const·NumPmeDomains·&amp;numPmeDomains,·const·t_inputrec·*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode,·PmeGpu·*pmeGpu,·const·DeviceContext·*deviceContext,·const·DeviceStream·*deviceStream,·const·PmeGpuProgram·*pmeGpuProgram,·const·gmx::MDLogger·&amp;mdlog,·std::shared_ptr&lt;·PmeGridsStorage·&gt;·pmeGridsStoragePtr):&#160;pme.cpp'],
1342 ········['../pme_8h.xhtml#a39e800d9a258e0c8a553fa7b71e10dcf',·1,·'gmx_pme_init(const·t_commrec·*cr,·const·NumPmeDomains·&amp;numPmeDomains,·const·t_inputrec·*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode,·PmeGpu·*pmeGpu,·const·DeviceContext·*deviceContext,·const·DeviceStream·*deviceStream,·const·PmeGpuProgram·*pmeGpuProgram,·const·gmx::MDLogger·&amp;mdlog,·std::shared_ptr&lt;·PmeGridsStorage·&gt;·pmeGridsStoragePtr):&#160;pme.cpp']1342 ········['../pme_8cpp.xhtml#a39e800d9a258e0c8a553fa7b71e10dcf',·1,·'gmx_pme_init(const·t_commrec·*cr,·const·NumPmeDomains·&amp;numPmeDomains,·const·t_inputrec·*ir,·const·matrix·box,·real·haloExtentForAtomDisplacement,·gmx_bool·bFreeEnergy_q,·gmx_bool·bFreeEnergy_lj,·gmx_bool·bReproducible,·real·ewaldcoeff_q,·real·ewaldcoeff_lj,·int·nthread,·PmeRunMode·runMode,·PmeGpu·*pmeGpu,·const·DeviceContext·*deviceContext,·const·DeviceStream·*deviceStream,·const·PmeGpuProgram·*pmeGpuProgram,·const·gmx::MDLogger·&amp;mdlog,·std::shared_ptr&lt;·PmeGridsStorage·&gt;·pmeGridsStoragePtr):&#160;pme.cpp']
1343 ····]],1343 ····]],
1344 ····['gmx_5fpme_5fpp_951',·['gmx_pme_pp',·['../structgmx__pme__pp.xhtml',·1,·'']]],1344 ····['gmx_5fpme_5fpp_951',·['gmx_pme_pp',·['../structgmx__pme__pp.xhtml',·1,·'']]],
1345 ····['gmx_5fpme_5freceive_5ff_952',·['gmx_pme_receive_f',·['../pme__pp_8cpp.xhtml#ac80dc53aeed084dcf80cf5a3581df28b',·1,·'gmx_pme_receive_f(gmx::PmePpCommGpu·*pmePpCommGpu,·const·t_commrec·*cr,·gmx::ForceWithVirial·*forceWithVirial,·real·*energy_q,·real·*energy_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·bool·useGpuPmePpComms,·bool·receivePmeForceToGpu,·float·*pme_cycles):&#160;pme_pp.cpp'],1345 ····['gmx_5fpme_5freceive_5ff_952',·['gmx_pme_receive_f',·['../pme__pp_8h.xhtml#ac80dc53aeed084dcf80cf5a3581df28b',·1,·'gmx_pme_receive_f(gmx::PmePpCommGpu·*pmePpCommGpu,·const·t_commrec·*cr,·gmx::ForceWithVirial·*forceWithVirial,·real·*energy_q,·real·*energy_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·bool·useGpuPmePpComms,·bool·receivePmeForceToGpu,·float·*pme_cycles):&#160;pme_pp.cpp'],
1346 ········['../pme__pp_8h.xhtml#ac80dc53aeed084dcf80cf5a3581df28b',·1,·'gmx_pme_receive_f(gmx::PmePpCommGpu·*pmePpCommGpu,·const·t_commrec·*cr,·gmx::ForceWithVirial·*forceWithVirial,·real·*energy_q,·real·*energy_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·bool·useGpuPmePpComms,·bool·receivePmeForceToGpu,·float·*pme_cycles):&#160;pme_pp.cpp']1346 ········['../pme__pp_8cpp.xhtml#ac80dc53aeed084dcf80cf5a3581df28b',·1,·'gmx_pme_receive_f(gmx::PmePpCommGpu·*pmePpCommGpu,·const·t_commrec·*cr,·gmx::ForceWithVirial·*forceWithVirial,·real·*energy_q,·real·*energy_lj,·real·*dvdlambda_q,·real·*dvdlambda_lj,·bool·useGpuPmePpComms,·bool·receivePmeForceToGpu,·float·*pme_cycles):&#160;pme_pp.cpp']
1347 ····]],1347 ····]],
1348 ····['gmx_5fpme_5freinit_953',·['gmx_pme_reinit',·['../pme_8h.xhtml#addb051f62c492eb3a5720c8cbf4332c6',·1,·'gmx_pme_reinit(gmx_pme_t·**pmedata,·const·t_commrec·*cr,·gmx_pme_t·*pme_src,·const·t_inputrec·*ir,·const·ivec·grid_size,·real·ewaldcoeff_q,·real·ewaldcoeff_lj):&#160;pme.cpp'], 
1349 ········['../pme_8cpp.xhtml#ab1d5c3f2e6e75de3f38107c0acd92c6d',·1,·'gmx_pme_reinit(struct·gmx_pme_t·**pmedata,·const·t_commrec·*cr,·struct·gmx_pme_t·*pme_src,·const·t_inputrec·*ir,·const·ivec·grid_size,·real·ewaldcoeff_q,·real·ewaldcoeff_lj):&#160;pme.cpp']1348 ····['gmx_5fpme_5freinit_953',·['gmx_pme_reinit',·['../pme_8cpp.xhtml#ab1d5c3f2e6e75de3f38107c0acd92c6d',·1,·'gmx_pme_reinit(struct·gmx_pme_t·**pmedata,·const·t_commrec·*cr,·struct·gmx_pme_t·*pme_src,·const·t_inputrec·*ir,·const·ivec·grid_size,·real·ewaldcoeff[·...·truncated·by·diffoscope;·len:·40,·SHA:·f10a97fabbc077cb809eb48d591ea7a81b5a3e51536fde95135f923050670520·...·]
 1349 ········['../pme_8h.xhtml#addb051f62c492eb3a5720c8cbf4332c6',·1,·'gmx_pme_reinit(gmx_pme_t·**pmedata,·const·t_commrec·*cr,·gmx_pme_t·*pme_src,·const·t_inputrec·*ir,·const·ivec·grid_size,·real·ewaldcoeff_q,·real·ewaldcoeff_lj):&#160;pme.cpp']
1350 ····]],1350 ····]],
1351 ····['gmx_5fpme_5freinit_5fatoms_954',·['gmx_pme_reinit_atoms',·['../pme_8h.xhtml#a05afbf020b612d12ae1007b79a737edb',·1,·'gmx_pme_reinit_atoms(gmx_pme_t·*pme,·int·numAtoms,·gmx::ArrayRef&lt;·const·real·&gt;·chargesA,·gmx::ArrayRef&lt;·const·real·&gt;·chargesB):&#160;pme.cpp'],1351 ····['gmx_5fpme_5freinit_5fatoms_954',·['gmx_pme_reinit_atoms',·['../pme_8cpp.xhtml#a1502bc293ce8fb854adf4648a1d2d4c7',·1,·'gmx_pme_reinit_atoms(gmx_pme_t·*pme,·const·int·numAtoms,·gmx::ArrayRef&lt;·const·real·&gt;·chargesA,·gmx::ArrayRef&lt;·const·real·&gt;·chargesB):&#160;pme.cpp'],
1352 ········['../pme_8cpp.xhtml#a1502bc293ce8fb854adf4648a1d2d4c7',·1,·'gmx_pme_reinit_atoms(gmx_pme_t·*pme,·const·int·numAtoms,·gmx::ArrayRef&lt;·const·real·&gt;·chargesA,·gmx::ArrayRef&lt;·const·real·&gt;·chargesB):&#160;pme.cpp']1352 ········['../pme_8h.xhtml#a05afbf020b612d12ae1007b79a737edb',·1,·'gmx_pme_reinit_atoms(gmx_pme_t·*pme,·int·numAtoms,·gmx::ArrayRef&lt;·const·real·&gt;·chargesA,·gmx::ArrayRef&lt;·const·real·&gt;·chargesB):&#160;pme.cpp']
1353 ····]],1353 ····]],
1354 ····['gmx_5fpme_5fsend_5fcoeffs_5fcoords_955',·['gmx_pme_send_coeffs_coords',·['../pme__pp_8cpp.xhtml#a810bd87c033d0b7544a243693e1b53d2',·1,·'pme_pp.cpp']]],1354 ····['gmx_5fpme_5fsend_5fcoeffs_5fcoords_955',·['gmx_pme_send_coeffs_coords',·['../pme__pp_8cpp.xhtml#a810bd87c033d0b7544a243693e1b53d2',·1,·'pme_pp.cpp']]],
1355 ····['gmx_5fpme_5fsend_5fcoeffs_5fcoords_5fwait_956',·['gmx_pme_send_coeffs_coords_wait',·['../pme__pp_8cpp.xhtml#a8b23b61fb70dc499495370bccce186fe',·1,·'pme_pp.cpp']]],1355 ····['gmx_5fpme_5fsend_5fcoeffs_5fcoords_5fwait_956',·['gmx_pme_send_coeffs_coords_wait',·['../pme__pp_8cpp.xhtml#a8b23b61fb70dc499495370bccce186fe',·1,·'pme_pp.cpp']]],
1356 ····['gmx_5fpme_5fsend_5fcoordinates_957',·['gmx_pme_send_coordinates',·['../pme__pp_8cpp.xhtml#ab646bb77e2d8189a87259663e98a3aac',·1,·'gmx_pme_send_coordinates(t_forcerec·*fr,·const·t_commrec·*cr,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x,·real·lambda_q,·real·lambda_lj,·bool·computeEnergyAndVirial,·int64_t·step,·bool·useGpuPmePpComms,·bool·receiveCoordinateAddressFromPme,·bool·sendCoordinatesFromGpu,·bool·receiveForcesToGpu,·GpuEventSynchronizer·*coordinatesReadyOnDeviceEvent,·bool·useMdGpuGraph,·gmx_wallcycle·*wcycle):&#160;pme_pp.cpp'],1356 ····['gmx_5fpme_5fsend_5fcoordinates_957',·['gmx_pme_send_coordinates',·['../pme__pp_8cpp.xhtml#ab646bb77e2d8189a87259663e98a3aac',·1,·'gmx_pme_send_coordinates(t_forcerec·*fr,·const·t_commrec·*cr,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x,·real·lambda_q,·real·lambda_lj,·bool·computeEnergyAndVirial,·int64_t·step,·bool·useGpuPmePpComms,·bool·receiveCoordinateAddressFromPme,·bool·sendCoordinatesFromGpu,·bool·receiveForcesToGpu,·GpuEventSynchronizer·*coordinatesReadyOnDeviceEvent,·bool·useMdGpuGraph,·gmx_wallcycle·*wcycle):&#160;pme_pp.cpp'],
1357 ········['../pme__pp_8h.xhtml#a56a70e5ba4d08896460c86b77914dfb3',·1,·'gmx_pme_send_coordinates(t_forcerec·*fr,·const·t_commrec·*cr,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x,·real·lambda_q,·real·lambda_lj,·bool·computeEnergyAndVirial,·int64_t·step,·bool·useGpuPmePpComms,·bool·reinitGpuPmePpComms,·bool·sendCoordinatesFromGpu,·bool·receiveForcesToGpu,·GpuEventSynchronizer·*coordinatesReadyOnDeviceEvent,·bool·useMdGpuGraph,·gmx_wallcycle·*wcycle):&#160;pme_pp.cpp']1357 ········['../pme__pp_8h.xhtml#a56a70e5ba4d08896460c86b77914dfb3',·1,·'gmx_pme_send_coordinates(t_forcerec·*fr,·const·t_commrec·*cr,·const·matrix·box,·gmx::ArrayRef&lt;·const·gmx::RVec·&gt;·x,·real·lambda_q,·real·lambda_lj,·bool·computeEnergyAndVirial,·int64_t·step,·bool·useGpuPmePpComms,·bool·reinitGpuPmePpComms,·bool·sendCoordinatesFromGpu,·bool·receiveForcesToGpu,·GpuEventSynchronizer·*coordinatesReadyOnDeviceEvent,·bool·useMdGpuGraph,·gmx_wallcycle·*wcycle):&#160;pme_pp.cpp']
1358 ····]],1358 ····]],
1359 ····['gmx_5fpme_5fsend_5ffinish_958',·['gmx_pme_send_finish',·['../pme__pp_8cpp.xhtml#a4daff17a719886efa0309286a8278bcc',·1,·'gmx_pme_send_finish(const·t_commrec·*cr):&#160;pme_pp.cpp'],1359 ····['gmx_5fpme_5fsend_5ffinish_958',·['gmx_pme_send_finish',·['../pme__pp_8cpp.xhtml#a4daff17a719886efa0309286a8278bcc',·1,·'gmx_pme_send_finish(const·t_commrec·*cr):&#160;pme_pp.cpp'],
Offset 1541, 16 lines modifiedOffset 1541, 16 lines modified
1541 ····['gpp_5fatomtype_2eh_1116',·['gpp_atomtype.h',·['../gpp__atomtype_8h.xhtml',·1,·'']]],1541 ····['gpp_5fatomtype_2eh_1116',·['gpp_atomtype.h',·['../gpp__atomtype_8h.xhtml',·1,·'']]],
1542 ····['gpp_5fbond_5fatomtype_2ecpp_1117',·['gpp_bond_atomtype.cpp',·['../tests_2gpp__bond__atomtype_8cpp.xhtml',·1,·'']]],1542 ····['gpp_5fbond_5fatomtype_2ecpp_1117',·['gpp_bond_atomtype.cpp',·['../tests_2gpp__bond__atomtype_8cpp.xhtml',·1,·'']]],
1543 ····['gpp_5fbond_5fatomtype_2eh_1118',·['gpp_bond_atomtype.h',·['../gpp__bond__atomtype_8h.xhtml',·1,·'']]],1543 ····['gpp_5fbond_5fatomtype_2eh_1118',·['gpp_bond_atomtype.h',·['../gpp__bond__atomtype_8h.xhtml',·1,·'']]],
1544 ····['gpu_1119',·['gpu',·['../namespacegmx.xhtml#a3f42ed0b9f4da1face257003c06bfddba3432ca64f06615abf07ab44c10cada38',·1,·'gmx::Gpu'],1544 ····['gpu_1119',·['gpu',·['../namespacegmx.xhtml#a3f42ed0b9f4da1face257003c06bfddba3432ca64f06615abf07ab44c10cada38',·1,·'gmx::Gpu'],
1545 ········['../pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791a52f9ec21735243ad9917cda3ca077d32',·1,·'GPU:&#160;pme.h'],1545 ········['../pme_8h.xhtml#adc082ed1af9a4868af13352373ed3791a52f9ec21735243ad9917cda3ca077d32',·1,·'GPU:&#160;pme.h'],
1546 ········['../namespacegmx_1_1test.xhtml#a12502ff6638f23aeff85ad081f6a0a1ca52f9ec21735243ad9917cda3ca077d32',·1,·'gmx::test::GPU']1546 ········['../namespacegmx_1_1test.xhtml#a12502ff6638f23aeff85ad081f6a0a1ca52f9ec21735243ad9917cda3ca077d32',·1,·'gmx::test::GPU']
1547 ····]],1547 ····]],
1548 ····['gpu3dfft_1120',·['gpu3dfft',·['../classgmx_1_1Gpu3dFft.xhtml',·1,·'gmx::Gpu3dFft'], 
1549 ········['../classgmx_1_1Gpu3dFft.xhtml#a601de47c00396f7f8bb2df3fb91a65f0',·1,·'gmx::Gpu3dFft::Gpu3dFft()']1548 ····['gpu3dfft_1120',·['gpu3dfft',·['../classgmx_1_1Gpu3dFft.xhtml#a601de47c00396f7f8bb2df3fb91a65f0',·1,·'gmx::Gpu3dFft::Gpu3dFft()'],
 1549 ········['../classgmx_1_1Gpu3dFft.xhtml',·1,·'gmx::Gpu3dFft']
1550 ····]],1550 ····]],
1551 ····['gpu_5f3dfft_2ecpp_1121',·['gpu_3dfft.cpp',·['../gpu__3dfft_8cpp.xhtml',·1,·'']]],1551 ····['gpu_5f3dfft_2ecpp_1121',·['gpu_3dfft.cpp',·['../gpu__3dfft_8cpp.xhtml',·1,·'']]],
1552 ····['gpu_5f3dfft_2eh_1122',·['gpu_3dfft.h',·['../gpu__3dfft_8h.xhtml',·1,·'']]],1552 ····['gpu_5f3dfft_2eh_1122',·['gpu_3dfft.h',·['../gpu__3dfft_8h.xhtml',·1,·'']]],
1553 ····['gpu_5f3dfft_5fcufft_2eh_1123',·['gpu_3dfft_cufft.h',·['../gpu__3dfft__cufft_8h.xhtml',·1,·'']]],1553 ····['gpu_5f3dfft_5fcufft_2eh_1123',·['gpu_3dfft_cufft.h',·['../gpu__3dfft__cufft_8h.xhtml',·1,·'']]],
1554 ····['gpu_5f3dfft_5fcufftmp_2ecpp_1124',·['gpu_3dfft_cufftmp.cpp',·['../gpu__3dfft__cufftmp_8cpp.xhtml',·1,·'']]],1554 ····['gpu_5f3dfft_5fcufftmp_2ecpp_1124',·['gpu_3dfft_cufftmp.cpp',·['../gpu__3dfft__cufftmp_8cpp.xhtml',·1,·'']]],
1555 ····['gpu_5f3dfft_5fcufftmp_2eh_1125',·['gpu_3dfft_cufftmp.h',·['../gpu__3dfft__cufftmp_8h.xhtml',·1,·'']]],1555 ····['gpu_5f3dfft_5fcufftmp_2eh_1125',·['gpu_3dfft_cufftmp.h',·['../gpu__3dfft__cufftmp_8h.xhtml',·1,·'']]],
1556 ····['gpu_5f3dfft_5fheffte_2ecpp_1126',·['gpu_3dfft_heffte.cpp',·['../gpu__3dfft__heffte_8cpp.xhtml',·1,·'']]],1556 ····['gpu_5f3dfft_5fheffte_2ecpp_1126',·['gpu_3dfft_heffte.cpp',·['../gpu__3dfft__heffte_8cpp.xhtml',·1,·'']]],
Offset 1575, 37 lines modifiedOffset 1575, 37 lines modified
1575 ····['gpu_5f3dfft_5fsycl_5frocfft_2eh_1145',·['gpu_3dfft_sycl_rocfft.h',·['../gpu__3dfft__sycl__rocfft_8h.xhtml',·1,·'']]],1575 ····['gpu_5f3dfft_5fsycl_5frocfft_2eh_1145',·['gpu_3dfft_sycl_rocfft.h',·['../gpu__3dfft__sycl__rocfft_8h.xhtml',·1,·'']]],
1576 ····['gpu_5f3dfft_5fsycl_5fvkfft_2ecpp_1146',·['gpu_3dfft_sycl_vkfft.cpp',·['../gpu__3dfft__sycl__vkfft_8cpp.xhtml',·1,·'']]],1576 ····['gpu_5f3dfft_5fsycl_5fvkfft_2ecpp_1146',·['gpu_3dfft_sycl_vkfft.cpp',·['../gpu__3dfft__sycl__vkfft_8cpp.xhtml',·1,·'']]],
1577 ····['gpu_5f3dfft_5fsycl_5fvkfft_2eh_1147',·['gpu_3dfft_sycl_vkfft.h',·['../gpu__3dfft__sycl__vkfft_8h.xhtml',·1,·'']]],1577 ····['gpu_5f3dfft_5fsycl_5fvkfft_2eh_1147',·['gpu_3dfft_sycl_vkfft.h',·['../gpu__3dfft__sycl__vkfft_8h.xhtml',·1,·'']]],
1578 ····['gpu_5faccumulate_5ftimings_1148',·['gpu_accumulate_timings',·['../namespacegmx.xhtml#ac59e98cb9d0f58b6a86541d252a1f6db',·1,·'gmx']]],1578 ····['gpu_5faccumulate_5ftimings_1148',·['gpu_accumulate_timings',·['../namespacegmx.xhtml#ac59e98cb9d0f58b6a86541d252a1f6db',·1,·'gmx']]],
1579 ····['gpu_5fclear_5foutputs_1149',·['gpu_clear_outputs',·['../namespacegmx.xhtml#a7ce8d46cf4d31f5615aafa09502b9885',·1,·'gmx']]],1579 ····['gpu_5fclear_5foutputs_1149',·['gpu_clear_outputs',·['../namespacegmx.xhtml#a7ce8d46cf4d31f5615aafa09502b9885',·1,·'gmx']]],
1580 ····['gpu_5fcommon_2eh_1150',·['gpu_common.h',·['../gpu__common_8h.xhtml',·1,·'']]],1580 ····['gpu_5fcommon_2eh_1150',·['gpu_common.h',·['../gpu__common_8h.xhtml',·1,·'']]],
1581 ····['gpu_5fcommon_5futils_2eh_1151',·['gpu_common_utils.h',·['../gpu__common__utils_8h.xhtml',·1,·'']]],1581 ····['gpu_5fcommon_5futils_2eh_1151',·['gpu_common_utils.h',·['../gpu__common__utils_8h.xhtml',·1,·'']]],
 1582 ····['gpu_5fcopy_5fxq_5fto_5fgpu_1152',·['gpu_copy_xq_to_gpu',·['../namespacegmx.xhtml#a81682a6299331fb76b415a8fd0d6bb4c',·1,·'gmx::gpu_copy_xq_to_gpu(NbnxmGpu·*nb,·const·nbnxn_atomdata_t·*nbatom,·const·AtomLocality·atomLocality)'],
1582 ····['gpu_5fcopy_5fxq_5fto_5fgpu_1152',·['gpu_copy_xq_to_gpu',·['../namespacegmx.xhtml#ab38729f4217d6e32d04e32b877e8c3c6',·1,·'gmx::gpu_copy_xq_to_gpu(NbnxmGpu·gmx_unused·*nb,·const·struct·nbnxn_atomdata_t·gmx_unused·*nbdata,·AtomLocality·gmx_unused·aloc)'],1583 ········['../namespacegmx.xhtml#ab38729f4217d6e32d04e32b877e8c3c6',·1,·'gmx::gpu_copy_xq_to_gpu(NbnxmGpu·gmx_unused·*nb,·const·struct·nbnxn_atomdata_t·gmx_unused·*nbdata,·AtomLocality·gmx_unused·aloc)']
1583 ········['../namespacegmx.xhtml#a81682a6299331fb76b415a8fd0d6bb4c',·1,·'gmx::gpu_copy_xq_to_gpu(NbnxmGpu·*nb,·const·nbnxn_atomdata_t·*nbatom,·const·AtomLocality·atomLocality)'] 
1584 ····]],1584 ····]],
1585 ····['gpu_5fdata_5fmgmt_2eh_1153',·['gpu_data_mgmt.h',·['../gpu__data__mgmt_8h.xhtml',·1,·'']]],1585 ····['gpu_5fdata_5fmgmt_2eh_1153',·['gpu_data_mgmt.h',·['../gpu__data__mgmt_8h.xhtml',·1,·'']]],
1586 ····['gpu_5ffree_1154',·['gpu_free',·['../namespacegmx.xhtml#af96be16f42d67a9ddb29abe7810a48ba',·1,·'gmx::gpu_free(NbnxmGpu·gmx_unused·*nb)'],1586 ····['gpu_5ffree_1154',·['gpu_free',·['../namespacegmx.xhtml#af96be16f42d67a9ddb29abe7810a48ba',·1,·'gmx::gpu_free(NbnxmGpu·gmx_unused·*nb)'],
1587 ········['../namespacegmx.xhtml#ac31ed3e4c02494575fe3d85683ed95a4',·1,·'gmx::gpu_free(NbnxmGpu·*nb)']1587 ········['../namespacegmx.xhtml#ac31ed3e4c02494575fe3d85683ed95a4',·1,·'gmx::gpu_free(NbnxmGpu·*nb)']
1588 ····]],1588 ····]],
1589 ····['gpu_5ffree_5fplatform_5fspecific_1155',·['gpu_free_platform_specific',·['../namespacegmx.xhtml#a0c9945e49d8977c64f9514ab048fffb7',·1,·'gmx']]],1589 ····['gpu_5ffree_5fplatform_5fspecific_1155',·['gpu_free_platform_specific',·['../namespacegmx.xhtml#a0c9945e49d8977c64f9514ab048fffb7',·1,·'gmx']]],
1590 ····['gpu_5fget_5ff_1156',·['gpu_get_f',·['../namespacegmx.xhtml#a3f4aa560b48378f9e8ab275ff326b4da',·1,·'gmx']]],1590 ····['gpu_5fget_5ff_1156',·['gpu_get_f',·['../namespacegmx.xhtml#a3f4aa560b48378f9e8ab275ff326b4da',·1,·'gmx']]],
 1591 ····['gpu_5fget_5ftimings_1157',·['gpu_get_timings',·['../namespacegmx.xhtml#adc6c6fd8f6ed6f95bf9137379d020b76',·1,·'gmx::gpu_get_timings(NbnxmGpu·*nb)'],
1591 ····['gpu_5fget_5ftimings_1157',·['gpu_get_timings',·['../namespacegmx.xhtml#ab7a59287bd253fd4feccbc55b49dd6c7',·1,·'gmx::gpu_get_timings(NbnxmGpu·gmx_unused·*nb)'],1592 ········['../namespacegmx.xhtml#ab7a59287bd253fd4feccbc55b49dd6c7',·1,·'gmx::gpu_get_timings(NbnxmGpu·gmx_unused·*nb)']
1592 ········['../namespacegmx.xhtml#adc6c6fd8f6ed6f95bf9137379d020b76',·1,·'gmx::gpu_get_timings(NbnxmGpu·*nb)'] 
1593 ····]],1593 ····]],
1594 ····['gpu_5finit_1158',·['gpu_init',·['../namespacegmx.xhtml#ab372371672d176090085a7d51bfa0fe8',·1,·'gmx']]],1594 ····['gpu_5finit_1158',·['gpu_init',·['../namespacegmx.xhtml#ab372371672d176090085a7d51bfa0fe8',·1,·'gmx']]],
1595 ····['gpu_5finit_5fatomdata_1159',·['gpu_init_atomdata',·['../namespacegmx.xhtml#aed87fa557eeacefe44d14a79f92a13e5',·1,·'gmx']]],1595 ····['gpu_5finit_5fatomdata_1159',·['gpu_init_atomdata',·['../namespacegmx.xhtml#aed87fa557eeacefe44d14a79f92a13e5',·1,·'gmx']]],
 1596 ····['gpu_5finit_5fpairlist_1160',·['gpu_init_pairlist',·['../namespacegmx.xhtml#a76b7889defa44d4b0e3c97d5ce6a4988',·1,·'gmx::gpu_init_pairlist(NbnxmGpu·*nb,·const·NbnxnPairlistGpu·*h_plist,·const·InteractionLocality·iloc)'],
1596 ····['gpu_5finit_5fpairlist_1160',·['gpu_init_pairlist',·['../namespacegmx.xhtml#acd25525982179407dd080639bb19f06d',·1,·'gmx::gpu_init_pairlist(NbnxmGpu·gmx_unused·*nb,·const·struct·NbnxnPairlistGpu·gmx_unused·*h_nblist,·InteractionLocality·gmx_unused·iloc)'],1597 ········['../namespacegmx.xhtml#acd25525982179407dd080639bb19f06d',·1,·'gmx::gpu_init_pairlist(NbnxmGpu·gmx_unused·*nb,·const·struct·NbnxnPairlistGpu·gmx_unused·*h_nblist,·InteractionLocality·gmx_unused·iloc)']
1597 ········['../namespacegmx.xhtml#a76b7889defa44d4b0e3c97d5ce6a4988',·1,·'gmx::gpu_init_pairlist(NbnxmGpu·*nb,·const·NbnxnPairlistGpu·*h_plist,·const·InteractionLocality·iloc)'] 
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1602 ····['gpu_5fkernel_5futils_2eh_1164',·['gpu_kernel_utils.h',·['../gpu__kernel__utils_8h.xhtml',·1,·'']]],1602 ····['gpu_5fkernel_5futils_2eh_1164',·['gpu_kernel_utils.h',·['../gpu__kernel__utils_8h.xhtml',·1,·'']]],
1603 ····['gpu_5flaunch_5fcpyback_1165',·['gpu_launch_cpyback',·['../namespacegmx.xhtml#a7f597489a21ec7526af49e30af3dd413',·1,·'gmx::gpu_launch_cpyback(NbnxmGpu·*nb,·struct·nbnxn_atomdata_t·*nbatom,·const·StepWorkload·&amp;stepWork,·const·AtomLocality·atomLocality)'], 
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252 ····['helplinks_186',·['helplinks',·['../classgmx_1_1HelpLinks.xhtml',·1,·'gmx::HelpLinks'],252 ····['helplinks_186',·['helplinks',·['../classgmx_1_1HelpLinks.xhtml',·1,·'gmx::HelpLinks'],
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274 ····['helptitle_5fdistance_197',·['helptitle_distance',·['../sm__distance_8cpp.xhtml#ae4dcf55ca7cd7f92b81e9a57f8efb0c1',·1,·'sm_distance.cpp']]],274 ····['helptitle_5fdistance_197',·['helptitle_distance',·['../sm__distance_8cpp.xhtml#ae4dcf55ca7cd7f92b81e9a57f8efb0c1',·1,·'sm_distance.cpp']]],
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277 ····['helptopic_2ecpp_200',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]],277 ····['helptopic_2ecpp_200',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]],
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281 ········['../classgmx_1_1HelpWriterContext.xhtml#ae1e18511b3fea03259da87cceb160ef0',·1,·'gmx::HelpWriterContext::HelpWriterContext(const·HelpWriterContext·&amp;other)'],281 ········['../classgmx_1_1HelpLinks.xhtml#a734bf51c01e151da043a218f686b5114',·1,·'gmx::HelpLinks::HelpWriterContext'],
282 ········['../classgmx_1_1HelpWriterContext.xhtml#a9cc36f78e38c772e52c4cdc73cf18d7c',·1,·'gmx::HelpWriterContext::HelpWriterContext(TextWriter·*writer,·HelpOutputFormat·format,·const·HelpLinks·*links)'],282 ········['../classgmx_1_1HelpWriterContext.xhtml#a9cc36f78e38c772e52c4cdc73cf18d7c',·1,·'gmx::HelpWriterContext::HelpWriterContext(TextWriter·*writer,·HelpOutputFormat·format,·const·HelpLinks·*links)'],
283 ········['../classgmx_1_1HelpWriterContext.xhtml#ab17b32ad5802855990bd79ae6ada94b4',·1,·'gmx::HelpWriterContext::HelpWriterContext(TextWriter·*writer,·HelpOutputFormat·format)'], 
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295 ····['high_209',·['High',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319a655d20c1ca69519ca647684edbb2db35',·1,·'device_stream.h']]],295 ····['high_209',·['High',·['../device__stream_8h.xhtml#a745c3a25d092600ae45b68d7e73d8319a655d20c1ca69519ca647684edbb2db35',·1,·'device_stream.h']]],
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312 ····['histogramfrombins_222',·['histogramFromBins',·['../group__group__publicapi.xhtml#ga73a2213cd82e2f915b9f9d65a4b85212',·1,·'gmx']]],312 ····['histogramfrombins_222',·['histogramFromBins',·['../group__group__publicapi.xhtml#ga73a2213cd82e2f915b9f9d65a4b85212',·1,·'gmx']]],
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314 ····['histogramisequilibrated_224',·['histogramIsEquilibrated',·['../namespacegmx_1_1anonymous__namespace_02histogramsize_8cpp_03.xhtml#aa21d0e550b2eada448c1e14b657f1ca1',·1,·'gmx::anonymous_namespace{histogramsize.cpp}']]],314 ····['histogramisequilibrated_224',·['histogramIsEquilibrated',·['../namespacegmx_1_1anonymous__namespace_02histogramsize_8cpp_03.xhtml#aa21d0e550b2eada448c1e14b657f1ca1',·1,·'gmx::anonymous_namespace{histogramsize.cpp}']]],
315 ····['histogramsize_225',·['histogramsize',·['../classgmx_1_1HistogramSize.xhtml',·1,·'gmx::HistogramSize'],315 ····['histogramsize_225',·['histogramsize',·['../classgmx_1_1HistogramSize.xhtml',·1,·'gmx::HistogramSize'],
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316 ········['../classgmx_1_1HistogramSize.xhtml#ac1c0ea80231544919c124024db5b2203',·1,·'gmx::HistogramSize::HistogramSize()'],317 ········['../classgmx_1_1HistogramSize.xhtml#ac1c0ea80231544919c124024db5b2203',·1,·'gmx::HistogramSize::HistogramSize(const·AwhBiasParams·&amp;awhBiasParams,·double·histogramSizeInitial)'],
317 ········['../classgmx_1_1BiasState.xhtml#aa9f45bf3772811b41c2263d8d7985c72',·1,·'gmx::BiasState::histogramSize()'],318 ········['../classgmx_1_1BiasState.xhtml#aa9f45bf3772811b41c2263d8d7985c72',·1,·'gmx::BiasState::histogramSize()']
318 ········['../classgmx_1_1HistogramSize.xhtml#a114eca6ee210c4f957fb5f1850b4ae3f',·1,·'gmx::HistogramSize::histogramSize()'] 
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331 ····['hostallocatortest_233',·['HostAllocatorTest',·['../structgmx_1_1test_1_1HostAllocatorTest.xhtml',·1,·'gmx::test']]],331 ····['hostallocatortest_233',·['HostAllocatorTest',·['../structgmx_1_1test_1_1HostAllocatorTest.xhtml',·1,·'gmx::test']]],
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30 ····['icommandlineoptionsmodulepointer_16',·['ICommandLineOptionsModulePointer',·['../namespacegmx.xhtml#a682ce4a779fde44ee633b8648eeafe87',·1,·'gmx']]],30 ····['icommandlineoptionsmodulepointer_16',·['ICommandLineOptionsModulePointer',·['../namespacegmx.xhtml#a682ce4a779fde44ee633b8648eeafe87',·1,·'gmx']]],
31 ····['icommandlineoptionsmodulesettings_17',·['ICommandLineOptionsModuleSettings',·['../classgmx_1_1ICommandLineOptionsModuleSettings.xhtml',·1,·'gmx']]],31 ····['icommandlineoptionsmodulesettings_17',·['ICommandLineOptionsModuleSettings',·['../classgmx_1_1ICommandLineOptionsModuleSettings.xhtml',·1,·'gmx']]],
32 ····['id_18',·['id',·['../structgmx_1_1HardwareTopology_1_1ProcessingUnit.xhtml#aec42b65b2d21b58f6bd27ff19205a538',·1,·'gmx::HardwareTopology::ProcessingUnit::id'],32 ····['id_18',·['id',·['../structgmx_1_1HardwareTopology_1_1ProcessingUnit.xhtml#aec42b65b2d21b58f6bd27ff19205a538',·1,·'gmx::HardwareTopology::ProcessingUnit::id'],
33 ········['../structgmx_1_1HardwareTopology_1_1Core.xhtml#a8e9bad14d30ae3f81b8cc13b750c2176',·1,·'gmx::HardwareTopology::Core::id'],33 ········['../structgmx_1_1HardwareTopology_1_1Core.xhtml#a8e9bad14d30ae3f81b8cc13b750c2176',·1,·'gmx::HardwareTopology::Core::id'],
34 ········['../structgmx_1_1HardwareTopology_1_1Package.xhtml#a8a3df986a213d53070f5750b8e1738a1',·1,·'gmx::HardwareTopology::Package::id'],34 ········['../structgmx_1_1HardwareTopology_1_1Package.xhtml#a8a3df986a213d53070f5750b8e1738a1',·1,·'gmx::HardwareTopology::Package::id'],
 35 ········['../classgmx_1_1test_1_1TestDevice.xhtml#a842bd593d3c47d3522470a3be45a862d',·1,·'gmx::test::TestDevice::id()'],
35 ········['../structgmx_1_1HardwareTopology_1_1NumaNode.xhtml#a1042d00c9db62e9d8f22a63403372acb',·1,·'gmx::HardwareTopology::NumaNode::id'],36 ········['../structgmx_1_1HardwareTopology_1_1NumaNode.xhtml#a1042d00c9db62e9d8f22a63403372acb',·1,·'gmx::HardwareTopology::NumaNode::id'],
36 ········['../classgmx_1_1SelectionTreeElement.xhtml#a46dfcd0739945171790e29857f14ce0a',·1,·'gmx::SelectionTreeElement::id'],37 ········['../classgmx_1_1SelectionTreeElement.xhtml#a46dfcd0739945171790e29857f14ce0a',·1,·'gmx::SelectionTreeElement::id'],
37 ········['../classgmx_1_1test_1_1TestDevice.xhtml#a842bd593d3c47d3522470a3be45a862d',·1,·'gmx::test::TestDevice::id()'], 
38 ········['../structDeviceInformation.xhtml#aef9ad6fdaf54d7176c07482afc323dbf',·1,·'DeviceInformation::id']38 ········['../structDeviceInformation.xhtml#aef9ad6fdaf54d7176c07482afc323dbf',·1,·'DeviceInformation::id']
39 ····]],39 ····]],
40 ····['idealweighthistupdate_19',·['idealWeighthistUpdate',·['../classgmx_1_1BiasParams.xhtml#afb2dc471a03d8f74ec34f583910abd2a',·1,·'gmx::BiasParams']]],40 ····['idealweighthistupdate_19',·['idealWeighthistUpdate',·['../classgmx_1_1BiasParams.xhtml#afb2dc471a03d8f74ec34f583910abd2a',·1,·'gmx::BiasParams']]],
 41 ····['idef_20',·['idef',·['../structthread__work__t.xhtml#a5d30701a3c72c500069bc8e9e110c076',·1,·'thread_work_t::idef'],
41 ····['idef_20',·['idef',·['../structgmx__localtop__t.xhtml#af5ed39749ac3708c36eed4209736cce2',·1,·'gmx_localtop_t::idef'],42 ········['../structgmx__localtop__t.xhtml#af5ed39749ac3708c36eed4209736cce2',·1,·'gmx_localtop_t::idef']
42 ········['../structthread__work__t.xhtml#a5d30701a3c72c500069bc8e9e110c076',·1,·'thread_work_t::idef'] 
43 ····]],43 ····]],
44 ····['idef_2ecpp_21',·['idef.cpp',·['../tests_2idef_8cpp.xhtml',·1,·'']]],44 ····['idef_2ecpp_21',·['idef.cpp',·['../tests_2idef_8cpp.xhtml',·1,·'']]],
45 ····['idef_2eh_22',·['idef.h',·['../idef_8h.xhtml',·1,·'']]],45 ····['idef_2eh_22',·['idef.h',·['../idef_8h.xhtml',·1,·'']]],
46 ····['identifyavx512fmaunits_23',·['identifyAvx512FmaUnits',·['../namespacegmx.xhtml#a6edee513f8fdeaffb9094124f58ba270',·1,·'gmx']]],46 ····['identifyavx512fmaunits_23',·['identifyAvx512FmaUnits',·['../namespacegmx.xhtml#a6edee513f8fdeaffb9094124f58ba270',·1,·'gmx']]],
47 ····['identifyavx512fmaunits_2ecpp_24',·['identifyavx512fmaunits.cpp',·['../identifyavx512fmaunits_8cpp.xhtml',·1,·'']]],47 ····['identifyavx512fmaunits_2ecpp_24',·['identifyavx512fmaunits.cpp',·['../identifyavx512fmaunits_8cpp.xhtml',·1,·'']]],
48 ····['identifyavx512fmaunits_2eh_25',·['identifyavx512fmaunits.h',·['../identifyavx512fmaunits_8h.xhtml',·1,·'']]],48 ····['identifyavx512fmaunits_2eh_25',·['identifyavx512fmaunits.h',·['../identifyavx512fmaunits_8h.xhtml',·1,·'']]],
49 ····['identityformatter_26',·['IdentityFormatter',·['../classgmx_1_1IdentityFormatter.xhtml',·1,·'gmx']]],49 ····['identityformatter_26',·['IdentityFormatter',·['../classgmx_1_1IdentityFormatter.xhtml',·1,·'gmx']]],
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Offset 5, 16 lines modifiedOffset 5, 16 lines modified
5 ····['abstractoption_2eh_3',·['abstractoption.h',·['../abstractoption_8h.xhtml',·1,·'']]],5 ····['abstractoption_2eh_3',·['abstractoption.h',·['../abstractoption_8h.xhtml',·1,·'']]],
6 ····['abstractoptionstorage_2ecpp_4',·['abstractoptionstorage.cpp',·['../abstractoptionstorage_8cpp.xhtml',·1,·'']]],6 ····['abstractoptionstorage_2ecpp_4',·['abstractoptionstorage.cpp',·['../abstractoptionstorage_8cpp.xhtml',·1,·'']]],
7 ····['abstractoptionstorage_2eh_5',·['abstractoptionstorage.h',·['../abstractoptionstorage_8h.xhtml',·1,·'']]],7 ····['abstractoptionstorage_2eh_5',·['abstractoptionstorage.h',·['../abstractoptionstorage_8h.xhtml',·1,·'']]],
8 ····['abstractsection_2ecpp_6',·['abstractsection.cpp',·['../abstractsection_8cpp.xhtml',·1,·'']]],8 ····['abstractsection_2ecpp_6',·['abstractsection.cpp',·['../abstractsection_8cpp.xhtml',·1,·'']]],
9 ····['abstractsection_2eh_7',·['abstractsection.h',·['../abstractsection_8h.xhtml',·1,·'']]],9 ····['abstractsection_2eh_7',·['abstractsection.h',·['../abstractsection_8h.xhtml',·1,·'']]],
10 ····['accessor_5fpolicy_2ecpp_8',·['accessor_policy.cpp',·['../accessor__policy_8cpp.xhtml',·1,·'']]],10 ····['accessor_5fpolicy_2ecpp_8',·['accessor_policy.cpp',·['../accessor__policy_8cpp.xhtml',·1,·'']]],
11 ····['accessor_5fpolicy_2eh_9',·['accessor_policy.h',·['../accessor__policy_8h.xhtml',·1,·'']]],11 ····['accessor_5fpolicy_2eh_9',·['accessor_policy.h',·['../accessor__policy_8h.xhtml',·1,·'']]],
12 ····['alignedallocator_2ecpp_10',·['alignedallocator.cpp',·['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],12 ····['alignedallocator_2ecpp_10',·['alignedallocator.cpp',·['../tests_2alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],
13 ········['../tests_2alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)']13 ········['../alignedallocator_8cpp.xhtml',·1,·'(Global·Namespace)']
14 ····]],14 ····]],
15 ····['alignedallocator_2eh_11',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]],15 ····['alignedallocator_2eh_11',·['alignedallocator.h',·['../alignedallocator_8h.xhtml',·1,·'']]],
16 ····['alignedallocator_5fimpl_2eh_12',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]],16 ····['alignedallocator_5fimpl_2eh_12',·['alignedallocator_impl.h',·['../alignedallocator__impl_8h.xhtml',·1,·'']]],
17 ····['allocator_2eh_13',·['allocator.h',·['../allocator_8h.xhtml',·1,·'']]],17 ····['allocator_2eh_13',·['allocator.h',·['../allocator_8h.xhtml',·1,·'']]],
18 ····['analysisdata_2ecpp_14',·['analysisdata.cpp',·['../analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)'],18 ····['analysisdata_2ecpp_14',·['analysisdata.cpp',·['../analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)'],
19 ········['../tests_2analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)']19 ········['../tests_2analysisdata_8cpp.xhtml',·1,·'(Global·Namespace)']
20 ····]],20 ····]],
Offset 24, 16 lines modifiedOffset 24, 16 lines modified
24 ········['../src_2gromacs_2energyanalysis_2analysismodule_8h.xhtml',·1,·'(Global·Namespace)']24 ········['../src_2gromacs_2energyanalysis_2analysismodule_8h.xhtml',·1,·'(Global·Namespace)']
25 ····]],25 ····]],
26 ····['analysissettings_2ecpp_18',·['analysissettings.cpp',·['../analysissettings_8cpp.xhtml',·1,·'']]],26 ····['analysissettings_2ecpp_18',·['analysissettings.cpp',·['../analysissettings_8cpp.xhtml',·1,·'']]],
27 ····['analysissettings_2eh_19',·['analysissettings.h',·['../analysissettings_8h.xhtml',·1,·'']]],27 ····['analysissettings_2eh_19',·['analysissettings.h',·['../analysissettings_8h.xhtml',·1,·'']]],
28 ····['analysissettings_5fimpl_2eh_20',·['analysissettings_impl.h',·['../analysissettings__impl_8h.xhtml',·1,·'']]],28 ····['analysissettings_5fimpl_2eh_20',·['analysissettings_impl.h',·['../analysissettings__impl_8h.xhtml',·1,·'']]],
29 ····['andersentemperaturecoupling_2ecpp_21',·['andersentemperaturecoupling.cpp',·['../andersentemperaturecoupling_8cpp.xhtml',·1,·'']]],29 ····['andersentemperaturecoupling_2ecpp_21',·['andersentemperaturecoupling.cpp',·['../andersentemperaturecoupling_8cpp.xhtml',·1,·'']]],
30 ····['andersentemperaturecoupling_2eh_22',·['andersentemperaturecoupling.h',·['../andersentemperaturecoupling_8h.xhtml',·1,·'']]],30 ····['andersentemperaturecoupling_2eh_22',·['andersentemperaturecoupling.h',·['../andersentemperaturecoupling_8h.xhtml',·1,·'']]],
31 ····['angle_2ecpp_23',·['angle.cpp',·['../tests_2angle_8cpp.xhtml',·1,·'(Global·Namespace)'],31 ····['angle_2ecpp_23',·['angle.cpp',·['../modules_2angle_8cpp.xhtml',·1,·'(Global·Namespace)'],
32 ········['../modules_2angle_8cpp.xhtml',·1,·'(Global·Namespace)']32 ········['../tests_2angle_8cpp.xhtml',·1,·'(Global·Namespace)']
33 ····]],33 ····]],
34 ····['angle_2eh_24',·['angle.h',·['../angle_8h.xhtml',·1,·'']]],34 ····['angle_2eh_24',·['angle.h',·['../angle_8h.xhtml',·1,·'']]],
35 ····['any_2ecpp_25',·['any.cpp',·['../any_8cpp.xhtml',·1,·'']]],35 ····['any_2ecpp_25',·['any.cpp',·['../any_8cpp.xhtml',·1,·'']]],
36 ····['any_2eh_26',·['any.h',·['../any_8h.xhtml',·1,·'']]],36 ····['any_2eh_26',·['any.h',·['../any_8h.xhtml',·1,·'']]],
37 ····['architecture_2eh_27',·['architecture.h',·['../architecture_8h.xhtml',·1,·'']]],37 ····['architecture_2eh_27',·['architecture.h',·['../architecture_8h.xhtml',·1,·'']]],
38 ····['arraydata_2ecpp_28',·['arraydata.cpp',·['../tests_2arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'],38 ····['arraydata_2ecpp_28',·['arraydata.cpp',·['../tests_2arraydata_8cpp.xhtml',·1,·'(Global·Namespace)'],
39 ········['../arraydata_8cpp.xhtml',·1,·'(Global·Namespace)']39 ········['../arraydata_8cpp.xhtml',·1,·'(Global·Namespace)']
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Offset 26, 30 lines modifiedOffset 26, 30 lines modified
26 ····['biasstate_2eh_24',·['biasstate.h',·['../biasstate_8h.xhtml',·1,·'']]],26 ····['biasstate_2eh_24',·['biasstate.h',·['../biasstate_8h.xhtml',·1,·'']]],
27 ····['biaswriter_2eh_25',·['biaswriter.h',·['../biaswriter_8h.xhtml',·1,·'']]],27 ····['biaswriter_2eh_25',·['biaswriter.h',·['../biaswriter_8h.xhtml',·1,·'']]],
28 ····['binaryinformation_2ecpp_26',·['binaryinformation.cpp',·['../binaryinformation_8cpp.xhtml',·1,·'']]],28 ····['binaryinformation_2ecpp_26',·['binaryinformation.cpp',·['../binaryinformation_8cpp.xhtml',·1,·'']]],
29 ····['binaryinformation_2eh_27',·['binaryinformation.h',·['../binaryinformation_8h.xhtml',·1,·'']]],29 ····['binaryinformation_2eh_27',·['binaryinformation.h',·['../binaryinformation_8h.xhtml',·1,·'']]],
30 ····['bitmask_2eh_28',·['bitmask.h',·['../include_2gromacs_2utility_2bitmask_8h.xhtml',·1,·'(Global·Namespace)'],30 ····['bitmask_2eh_28',·['bitmask.h',·['../include_2gromacs_2utility_2bitmask_8h.xhtml',·1,·'(Global·Namespace)'],
31 ········['../tests_2bitmask_8h.xhtml',·1,·'(Global·Namespace)']31 ········['../tests_2bitmask_8h.xhtml',·1,·'(Global·Namespace)']
32 ····]],32 ····]],
33 ····['bonded_2ecpp_29',·['bonded.cpp',·['../tests_2bonded_8cpp.xhtml',·1,·'(Global·Namespace)'],33 ····['bonded_2ecpp_29',·['bonded.cpp',·['../bonded_8cpp.xhtml',·1,·'(Global·Namespace)'],
34 ········['../bonded_8cpp.xhtml',·1,·'(Global·Namespace)']34 ········['../tests_2bonded_8cpp.xhtml',·1,·'(Global·Namespace)']
35 ····]],35 ····]],
36 ····['bonded_2eh_30',·['bonded.h',·['../bonded_8h.xhtml',·1,·'']]],36 ····['bonded_2eh_30',·['bonded.h',·['../bonded_8h.xhtml',·1,·'']]],
37 ····['booltype_2ecpp_31',·['booltype.cpp',·['../booltype_8cpp.xhtml',·1,·'(Global·Namespace)'],37 ····['booltype_2ecpp_31',·['booltype.cpp',·['../booltype_8cpp.xhtml',·1,·'(Global·Namespace)'],
38 ········['../tests_2booltype_8cpp.xhtml',·1,·'(Global·Namespace)']38 ········['../tests_2booltype_8cpp.xhtml',·1,·'(Global·Namespace)']
39 ····]],39 ····]],
40 ····['booltype_2eh_32',·['booltype.h',·['../booltype_8h.xhtml',·1,·'']]],40 ····['booltype_2eh_32',·['booltype.h',·['../booltype_8h.xhtml',·1,·'']]],
41 ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]],41 ····['bootstrap_5floadstore_2ecpp_33',·['bootstrap_loadstore.cpp',·['../bootstrap__loadstore_8cpp.xhtml',·1,·'']]],
42 ····['boundingbox_2eh_34',·['boundingbox.h',·['../boundingbox_8h.xhtml',·1,·'']]],42 ····['boundingbox_2eh_34',·['boundingbox.h',·['../boundingbox_8h.xhtml',·1,·'']]],
43 ····['boundingbox_5fsimd_2eh_35',·['boundingbox_simd.h',·['../boundingbox__simd_8h.xhtml',·1,·'']]],43 ····['boundingbox_5fsimd_2eh_35',·['boundingbox_simd.h',·['../boundingbox__simd_8h.xhtml',·1,·'']]],
44 ····['boundingboxdistance_2eh_36',·['boundingboxdistance.h',·['../boundingboxdistance_8h.xhtml',·1,·'']]],44 ····['boundingboxdistance_2eh_36',·['boundingboxdistance.h',·['../boundingboxdistance_8h.xhtml',·1,·'']]],
45 ····['box_2ecpp_37',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]],45 ····['box_2ecpp_37',·['box.cpp',·['../box_8cpp.xhtml',·1,·'']]],
46 ····['box_2eh_38',·['box.h',·['../box_8h.xhtml',·1,·'']]],46 ····['box_2eh_38',·['box.h',·['../box_8h.xhtml',·1,·'']]],
47 ····['boxdeformation_2ecpp_39',·['boxdeformation.cpp',·['../programs_2mdrun_2tests_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)'],47 ····['boxdeformation_2ecpp_39',·['boxdeformation.cpp',·['../gromacs_2mdlib_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)'],
48 ········['../gromacs_2mdlib_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)']48 ········['../programs_2mdrun_2tests_2boxdeformation_8cpp.xhtml',·1,·'(Global·Namespace)']
49 ····]],49 ····]],
50 ····['boxdeformation_2eh_40',·['boxdeformation.h',·['../boxdeformation_8h.xhtml',·1,·'']]],50 ····['boxdeformation_2eh_40',·['boxdeformation.h',·['../boxdeformation_8h.xhtml',·1,·'']]],
51 ····['boxmatrix_2ecpp_41',·['boxmatrix.cpp',·['../boxmatrix_8cpp.xhtml',·1,·'']]],51 ····['boxmatrix_2ecpp_41',·['boxmatrix.cpp',·['../boxmatrix_8cpp.xhtml',·1,·'']]],
52 ····['boxmatrix_2eh_42',·['boxmatrix.h',·['../boxmatrix_8h.xhtml',·1,·'']]],52 ····['boxmatrix_2eh_42',·['boxmatrix.h',·['../boxmatrix_8h.xhtml',·1,·'']]],
53 ····['boxutilities_2ecpp_43',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]],53 ····['boxutilities_2ecpp_43',·['boxutilities.cpp',·['../boxutilities_8cpp.xhtml',·1,·'']]],
54 ····['broadcaststructs_2eh_44',·['broadcaststructs.h',·['../broadcaststructs_8h.xhtml',·1,·'']]],54 ····['broadcaststructs_2eh_44',·['broadcaststructs.h',·['../broadcaststructs_8h.xhtml',·1,·'']]],
55 ····['builder_2ecpp_45',·['builder.cpp',·['../builder_8cpp.xhtml',·1,·'']]],55 ····['builder_2ecpp_45',·['builder.cpp',·['../builder_8cpp.xhtml',·1,·'']]],
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15 ····['refdata_5fcheckers_2eh_11',·['refdata_checkers.h',·['../refdata__checkers_8h.xhtml',·1,·'']]],15 ····['refdata_5fcheckers_2eh_11',·['refdata_checkers.h',·['../refdata__checkers_8h.xhtml',·1,·'']]],
16 ····['refdata_5fimpl_2eh_12',·['refdata_impl.h',·['../refdata__impl_8h.xhtml',·1,·'']]],16 ····['refdata_5fimpl_2eh_12',·['refdata_impl.h',·['../refdata__impl_8h.xhtml',·1,·'']]],
17 ····['refdata_5ftests_2ecpp_13',·['refdata_tests.cpp',·['../refdata__tests_8cpp.xhtml',·1,·'']]],17 ····['refdata_5ftests_2ecpp_13',·['refdata_tests.cpp',·['../refdata__tests_8cpp.xhtml',·1,·'']]],
18 ····['refdata_5fxml_2ecpp_14',·['refdata_xml.cpp',·['../refdata__xml_8cpp.xhtml',·1,·'']]],18 ····['refdata_5fxml_2ecpp_14',·['refdata_xml.cpp',·['../refdata__xml_8cpp.xhtml',·1,·'']]],
19 ····['refdata_5fxml_2eh_15',·['refdata_xml.h',·['../refdata__xml_8h.xhtml',·1,·'']]],19 ····['refdata_5fxml_2eh_15',·['refdata_xml.h',·['../refdata__xml_8h.xhtml',·1,·'']]],
20 ····['referencetemperaturemanager_2ecpp_16',·['referencetemperaturemanager.cpp',·['../referencetemperaturemanager_8cpp.xhtml',·1,·'']]],20 ····['referencetemperaturemanager_2ecpp_16',·['referencetemperaturemanager.cpp',·['../referencetemperaturemanager_8cpp.xhtml',·1,·'']]],
21 ····['referencetemperaturemanager_2eh_17',·['referencetemperaturemanager.h',·['../referencetemperaturemanager_8h.xhtml',·1,·'']]],21 ····['referencetemperaturemanager_2eh_17',·['referencetemperaturemanager.h',·['../referencetemperaturemanager_8h.xhtml',·1,·'']]],
22 ····['register_2ecpp_18',·['register.cpp',·['../frameconverters_2register_8cpp.xhtml',·1,·'(Global·Namespace)'],22 ····['register_2ecpp_18',·['register.cpp',·['../tests_2register_8cpp.xhtml',·1,·'(Global·Namespace)'],
23 ········['../tests_2register_8cpp.xhtml',·1,·'(Global·Namespace)']23 ········['../frameconverters_2register_8cpp.xhtml',·1,·'(Global·Namespace)']
24 ····]],24 ····]],
25 ····['register_2eh_19',·['register.h',·['../register_8h.xhtml',·1,·'']]],25 ····['register_2eh_19',·['register.h',·['../register_8h.xhtml',·1,·'']]],
26 ····['repeatingsection_2ecpp_20',·['repeatingsection.cpp',·['../repeatingsection_8cpp.xhtml',·1,·'']]],26 ····['repeatingsection_2ecpp_20',·['repeatingsection.cpp',·['../repeatingsection_8cpp.xhtml',·1,·'']]],
27 ····['repeatingsection_2eh_21',·['repeatingsection.h',·['../repeatingsection_8h.xhtml',·1,·'']]],27 ····['repeatingsection_2eh_21',·['repeatingsection.h',·['../repeatingsection_8h.xhtml',·1,·'']]],
28 ····['replicaexchange_2ecpp_22',·['replicaexchange.cpp',·['../gromacs_2mdrun_2replicaexchange_8cpp.xhtml',·1,·'(Global·Namespace)'],28 ····['replicaexchange_2ecpp_22',·['replicaexchange.cpp',·['../programs_2mdrun_2tests_2replicaexchange_8cpp.xhtml',·1,·'(Global·Namespace)'],
29 ········['../programs_2mdrun_2tests_2replicaexchange_8cpp.xhtml',·1,·'(Global·Namespace)']29 ········['../gromacs_2mdrun_2replicaexchange_8cpp.xhtml',·1,·'(Global·Namespace)']
30 ····]],30 ····]],
31 ····['replicaexchange_2eh_23',·['replicaexchange.h',·['../replicaexchange_8h.xhtml',·1,·'']]],31 ····['replicaexchange_2eh_23',·['replicaexchange.h',·['../replicaexchange_8h.xhtml',·1,·'']]],
32 ····['replicaexchange_5fequivalence_2ecpp_24',·['replicaexchange_equivalence.cpp',·['../replicaexchange__equivalence_8cpp.xhtml',·1,·'']]],32 ····['replicaexchange_5fequivalence_2ecpp_24',·['replicaexchange_equivalence.cpp',·['../replicaexchange__equivalence_8cpp.xhtml',·1,·'']]],
33 ····['report_5fmethods_2ecpp_25',·['report_methods.cpp',·['../tests_2report__methods_8cpp.xhtml',·1,·'']]],33 ····['report_5fmethods_2ecpp_25',·['report_methods.cpp',·['../tests_2report__methods_8cpp.xhtml',·1,·'']]],
34 ····['reportgpuusage_2ecpp_26',·['reportgpuusage.cpp',·['../reportgpuusage_8cpp.xhtml',·1,·'']]],34 ····['reportgpuusage_2ecpp_26',·['reportgpuusage.cpp',·['../reportgpuusage_8cpp.xhtml',·1,·'']]],
35 ····['reportgpuusage_2eh_27',·['reportgpuusage.h',·['../reportgpuusage_8h.xhtml',·1,·'']]],35 ····['reportgpuusage_2eh_27',·['reportgpuusage.h',·['../reportgpuusage_8h.xhtml',·1,·'']]],
36 ····['requirements_2ecpp_28',·['requirements.cpp',·['../requirements_8cpp.xhtml',·1,·'(Global·Namespace)'],36 ····['requirements_2ecpp_28',·['requirements.cpp',·['../requirements_8cpp.xhtml',·1,·'(Global·Namespace)'],
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Offset 20, 16 lines modifiedOffset 20, 16 lines modified
20 ····]],20 ····]],
21 ····['scattering_2eh_15',·['scattering.h',·['../scattering_8h.xhtml',·1,·'']]],21 ····['scattering_2eh_15',·['scattering.h',·['../scattering_8h.xhtml',·1,·'']]],
22 ····['scatteringfactors_2ecpp_16',·['scatteringfactors.cpp',·['../scatteringfactors_8cpp.xhtml',·1,·'']]],22 ····['scatteringfactors_2ecpp_16',·['scatteringfactors.cpp',·['../scatteringfactors_8cpp.xhtml',·1,·'']]],
23 ····['scatteringfactors_2eh_17',·['scatteringfactors.h',·['../scatteringfactors_8h.xhtml',·1,·'']]],23 ····['scatteringfactors_2eh_17',·['scatteringfactors.h',·['../scatteringfactors_8h.xhtml',·1,·'']]],
24 ····['scope_5fguard_2ecpp_18',·['scope_guard.cpp',·['../scope__guard_8cpp.xhtml',·1,·'']]],24 ····['scope_5fguard_2ecpp_18',·['scope_guard.cpp',·['../scope__guard_8cpp.xhtml',·1,·'']]],
25 ····['seed_2ecpp_19',·['seed.cpp',·['../tests_2seed_8cpp.xhtml',·1,·'']]],25 ····['seed_2ecpp_19',·['seed.cpp',·['../tests_2seed_8cpp.xhtml',·1,·'']]],
26 ····['seed_2eh_20',·['seed.h',·['../seed_8h.xhtml',·1,·'']]],26 ····['seed_2eh_20',·['seed.h',·['../seed_8h.xhtml',·1,·'']]],
27 ····['select_2ecpp_21',·['select.cpp',·['../tests_2select_8cpp.xhtml',·1,·'(Global·Namespace)'],27 ····['select_2ecpp_21',·['select.cpp',·['../modules_2select_8cpp.xhtml',·1,·'(Global·Namespace)'],
28 ········['../modules_2select_8cpp.xhtml',·1,·'(Global·Namespace)']28 ········['../tests_2select_8cpp.xhtml',·1,·'(Global·Namespace)']
29 ····]],29 ····]],
30 ····['select_2eh_22',·['select.h',·['../select_8h.xhtml',·1,·'']]],30 ····['select_2eh_22',·['select.h',·['../select_8h.xhtml',·1,·'']]],
31 ····['selection_2ecpp_23',·['selection.cpp',·['../selection_8cpp.xhtml',·1,·'']]],31 ····['selection_2ecpp_23',·['selection.cpp',·['../selection_8cpp.xhtml',·1,·'']]],
32 ····['selection_2eh_24',·['selection.h',·['../selection_8h.xhtml',·1,·'']]],32 ····['selection_2eh_24',·['selection.h',·['../selection_8h.xhtml',·1,·'']]],
33 ····['selectioncollection_2ecpp_25',·['selectioncollection.cpp',·['../tests_2selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'],33 ····['selectioncollection_2ecpp_25',·['selectioncollection.cpp',·['../tests_2selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)'],
34 ········['../selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)']34 ········['../selectioncollection_8cpp.xhtml',·1,·'(Global·Namespace)']
35 ····]],35 ····]],
Offset 52, 31 lines modifiedOffset 52, 31 lines modified
52 ····['selhelp_2ecpp_40',·['selhelp.cpp',·['../selhelp_8cpp.xhtml',·1,·'']]],52 ····['selhelp_2ecpp_40',·['selhelp.cpp',·['../selhelp_8cpp.xhtml',·1,·'']]],
53 ····['selhelp_2eh_41',·['selhelp.h',·['../selhelp_8h.xhtml',·1,·'']]],53 ····['selhelp_2eh_41',·['selhelp.h',·['../selhelp_8h.xhtml',·1,·'']]],
54 ····['selmethod_2ecpp_42',·['selmethod.cpp',·['../selmethod_8cpp.xhtml',·1,·'']]],54 ····['selmethod_2ecpp_42',·['selmethod.cpp',·['../selmethod_8cpp.xhtml',·1,·'']]],
55 ····['selmethod_2eh_43',·['selmethod.h',·['../selmethod_8h.xhtml',·1,·'']]],55 ····['selmethod_2eh_43',·['selmethod.h',·['../selmethod_8h.xhtml',·1,·'']]],
56 ····['selparam_2eh_44',·['selparam.h',·['../selparam_8h.xhtml',·1,·'']]],56 ····['selparam_2eh_44',·['selparam.h',·['../selparam_8h.xhtml',·1,·'']]],
57 ····['selvalue_2ecpp_45',·['selvalue.cpp',·['../selvalue_8cpp.xhtml',·1,·'']]],57 ····['selvalue_2ecpp_45',·['selvalue.cpp',·['../selvalue_8cpp.xhtml',·1,·'']]],
58 ····['selvalue_2eh_46',·['selvalue.h',·['../selvalue_8h.xhtml',·1,·'']]],58 ····['selvalue_2eh_46',·['selvalue.h',·['../selvalue_8h.xhtml',·1,·'']]],
59 ····['setatoms_2ecpp_47',·['setatoms.cpp',·['../tests_2setatoms_8cpp.xhtml',·1,·'(Global·Namespace)'],59 ····['setatoms_2ecpp_47',·['setatoms.cpp',·['../outputadapters_2setatoms_8cpp.xhtml',·1,·'(Global·Namespace)'],
60 ········['../outputadapters_2setatoms_8cpp.xhtml',·1,·'(Global·Namespace)']60 ········['../tests_2setatoms_8cpp.xhtml',·1,·'(Global·Namespace)']
61 ····]],61 ····]],
62 ····['setatoms_2eh_48',·['setatoms.h',·['../setatoms_8h.xhtml',·1,·'']]],62 ····['setatoms_2eh_48',·['setatoms.h',·['../setatoms_8h.xhtml',·1,·'']]],
63 ····['setbothtime_2ecpp_49',·['setbothtime.cpp',·['../setbothtime_8cpp.xhtml',·1,·'']]],63 ····['setbothtime_2ecpp_49',·['setbothtime.cpp',·['../setbothtime_8cpp.xhtml',·1,·'']]],
64 ····['setbox_2eh_50',·['setbox.h',·['../setbox_8h.xhtml',·1,·'']]],64 ····['setbox_2eh_50',·['setbox.h',·['../setbox_8h.xhtml',·1,·'']]],
65 ····['setenv_2eh_51',·['setenv.h',·['../setenv_8h.xhtml',·1,·'']]],65 ····['setenv_2eh_51',·['setenv.h',·['../setenv_8h.xhtml',·1,·'']]],
66 ····['setforces_2ecpp_52',·['setforces.cpp',·['../setforces_8cpp.xhtml',·1,·'']]],66 ····['setforces_2ecpp_52',·['setforces.cpp',·['../setforces_8cpp.xhtml',·1,·'']]],
67 ····['setforces_2eh_53',·['setforces.h',·['../setforces_8h.xhtml',·1,·'']]],67 ····['setforces_2eh_53',·['setforces.h',·['../setforces_8h.xhtml',·1,·'']]],
68 ····['setprecision_2ecpp_54',·['setprecision.cpp',·['../setprecision_8cpp.xhtml',·1,·'']]],68 ····['setprecision_2ecpp_54',·['setprecision.cpp',·['../setprecision_8cpp.xhtml',·1,·'']]],
69 ····['setprecision_2eh_55',·['setprecision.h',·['../setprecision_8h.xhtml',·1,·'']]],69 ····['setprecision_2eh_55',·['setprecision.h',·['../setprecision_8h.xhtml',·1,·'']]],
70 ····['setstarttime_2ecpp_56',·['setstarttime.cpp',·['../tests_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)'],70 ····['setstarttime_2ecpp_56',·['setstarttime.cpp',·['../tests_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)'],
71 ········['../outputadapters_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)']71 ········['../outputadapters_2setstarttime_8cpp.xhtml',·1,·'(Global·Namespace)']
72 ····]],72 ····]],
73 ····['setstarttime_2eh_57',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]],73 ····['setstarttime_2eh_57',·['setstarttime.h',·['../setstarttime_8h.xhtml',·1,·'']]],
74 ····['settimestep_2ecpp_58',·['settimestep.cpp',·['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],74 ····['settimestep_2ecpp_58',·['settimestep.cpp',·['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)'],
75 ········['../outputadapters_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']75 ········['../tests_2settimestep_8cpp.xhtml',·1,·'(Global·Namespace)']
76 ····]],76 ····]],
77 ····['settimestep_2eh_59',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],77 ····['settimestep_2eh_59',·['settimestep.h',·['../settimestep_8h.xhtml',·1,·'']]],
78 ····['settle_2ecpp_60',·['settle.cpp',·['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)'],78 ····['settle_2ecpp_60',·['settle.cpp',·['../tests_2settle_8cpp.xhtml',·1,·'(Global·Namespace)'],
79 ········['../settle_8cpp.xhtml',·1,·'(Global·Namespace)']79 ········['../settle_8cpp.xhtml',·1,·'(Global·Namespace)']
80 ····]],80 ····]],
81 ····['settle_2eh_61',·['settle.h',·['../settle_8h.xhtml',·1,·'']]],81 ····['settle_2eh_61',·['settle.h',·['../settle_8h.xhtml',·1,·'']]],
82 ····['settle_5fgpu_2ecpp_62',·['settle_gpu.cpp',·['../settle__gpu_8cpp.xhtml',·1,·'']]],82 ····['settle_5fgpu_2ecpp_62',·['settle_gpu.cpp',·['../settle__gpu_8cpp.xhtml',·1,·'']]],
Offset 167, 16 lines modifiedOffset 167, 16 lines modified
167 ····['stringtoenumvalueconverter_2ecpp_141',·['stringtoenumvalueconverter.cpp',·['../stringtoenumvalueconverter_8cpp.xhtml',·1,·'']]],167 ····['stringtoenumvalueconverter_2ecpp_141',·['stringtoenumvalueconverter.cpp',·['../stringtoenumvalueconverter_8cpp.xhtml',·1,·'']]],
168 ····['stringtoenumvalueconverter_2eh_142',·['stringtoenumvalueconverter.h',·['../stringtoenumvalueconverter_8h.xhtml',·1,·'']]],168 ····['stringtoenumvalueconverter_2eh_142',·['stringtoenumvalueconverter.h',·['../stringtoenumvalueconverter_8h.xhtml',·1,·'']]],
169 ····['stringutil_2ecpp_143',·['stringutil.cpp',·['../stringutil_8cpp.xhtml',·1,·'(Global·Namespace)'],169 ····['stringutil_2ecpp_143',·['stringutil.cpp',·['../stringutil_8cpp.xhtml',·1,·'(Global·Namespace)'],
170 ········['../tests_2stringutil_8cpp.xhtml',·1,·'(Global·Namespace)']170 ········['../tests_2stringutil_8cpp.xhtml',·1,·'(Global·Namespace)']
171 ····]],171 ····]],
172 ····['stringutil_2eh_144',·['stringutil.h',·['../stringutil_8h.xhtml',·1,·'']]],172 ····['stringutil_2eh_144',·['stringutil.h',·['../stringutil_8h.xhtml',·1,·'']]],
173 ····['surfacearea_2ecpp_145',·['surfacearea.cpp',·['../tests_2surfacearea_8cpp.xhtml',·1,·'']]],173 ····['surfacearea_2ecpp_145',·['surfacearea.cpp',·['../tests_2surfacearea_8cpp.xhtml',·1,·'']]],
174 ····['swapcoords_2ecpp_146',·['swapcoords.cpp',·['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)'],174 ····['swapcoords_2ecpp_146',·['swapcoords.cpp',·['../gromacs_2swap_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)'],
175 ········['../gromacs_2swap_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)']175 ········['../programs_2mdrun_2tests_2swapcoords_8cpp.xhtml',·1,·'(Global·Namespace)']
176 ····]],176 ····]],
177 ····['swapcoords_2eh_147',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]],177 ····['swapcoords_2eh_147',·['swapcoords.h',·['../swapcoords_8h.xhtml',·1,·'']]],
178 ····['sycl_5fkernel_5futils_2eh_148',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]],178 ····['sycl_5fkernel_5futils_2eh_148',·['sycl_kernel_utils.h',·['../sycl__kernel__utils_8h.xhtml',·1,·'']]],
179 ····['syclutils_2eh_149',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]],179 ····['syclutils_2eh_149',·['syclutils.h',·['../syclutils_8h.xhtml',·1,·'']]],
180 ····['symrec_2ecpp_150',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]],180 ····['symrec_2ecpp_150',·['symrec.cpp',·['../symrec_8cpp.xhtml',·1,·'']]],
181 ····['symrec_2eh_151',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]],181 ····['symrec_2eh_151',·['symrec.h',·['../symrec_8h.xhtml',·1,·'']]],
182 ····['symtab_2ecpp_152',·['symtab.cpp',·['../tests_2symtab_8cpp.xhtml',·1,·'(Global·Namespace)'],182 ····['symtab_2ecpp_152',·['symtab.cpp',·['../tests_2symtab_8cpp.xhtml',·1,·'(Global·Namespace)'],
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Offset 49, 16 lines modifiedOffset 49, 16 lines modified
49 ····['thermochemistry_2eh_43',·['thermochemistry.h',·['../thermochemistry_8h.xhtml',·1,·'']]],49 ····['thermochemistry_2eh_43',·['thermochemistry.h',·['../thermochemistry_8h.xhtml',·1,·'']]],
50 ····['threadaffinity_2eh_44',·['threadaffinity.h',·['../threadaffinity_8h.xhtml',·1,·'']]],50 ····['threadaffinity_2eh_44',·['threadaffinity.h',·['../threadaffinity_8h.xhtml',·1,·'']]],
51 ····['threaded_5fforce_5fbuffer_2ecpp_45',·['threaded_force_buffer.cpp',·['../threaded__force__buffer_8cpp.xhtml',·1,·'']]],51 ····['threaded_5fforce_5fbuffer_2ecpp_45',·['threaded_force_buffer.cpp',·['../threaded__force__buffer_8cpp.xhtml',·1,·'']]],
52 ····['threaded_5fforce_5fbuffer_2eh_46',·['threaded_force_buffer.h',·['../threaded__force__buffer_8h.xhtml',·1,·'']]],52 ····['threaded_5fforce_5fbuffer_2eh_46',·['threaded_force_buffer.h',·['../threaded__force__buffer_8h.xhtml',·1,·'']]],
53 ····['threefry_2ecpp_47',·['threefry.cpp',·['../threefry_8cpp.xhtml',·1,·'']]],53 ····['threefry_2ecpp_47',·['threefry.cpp',·['../threefry_8cpp.xhtml',·1,·'']]],
54 ····['threefry_2eh_48',·['threefry.h',·['../threefry_8h.xhtml',·1,·'']]],54 ····['threefry_2eh_48',·['threefry.h',·['../threefry_8h.xhtml',·1,·'']]],
55 ····['timecontrol_2ecpp_49',·['timecontrol.cpp',·['../tests_2timecontrol_8cpp.xhtml',·1,·'']]],55 ····['timecontrol_2ecpp_49',·['timecontrol.cpp',·['../tests_2timecontrol_8cpp.xhtml',·1,·'']]],
56 ····['timeunitmanager_2ecpp_50',·['timeunitmanager.cpp',·['../timeunitmanager_8cpp.xhtml',·1,·'(Global·Namespace)'],56 ····['timeunitmanager_2ecpp_50',·['timeunitmanager.cpp',·['../tests_2timeunitmanager_8cpp.xhtml',·1,·'(Global·Namespace)'],
57 ········['../tests_2timeunitmanager_8cpp.xhtml',·1,·'(Global·Namespace)']57 ········['../timeunitmanager_8cpp.xhtml',·1,·'(Global·Namespace)']
58 ····]],58 ····]],
59 ····['timeunitmanager_2eh_51',·['timeunitmanager.h',·['../timeunitmanager_8h.xhtml',·1,·'']]],59 ····['timeunitmanager_2eh_51',·['timeunitmanager.h',·['../timeunitmanager_8h.xhtml',·1,·'']]],
60 ····['timing_2ecpp_52',·['timing.cpp',·['../timing_8cpp.xhtml',·1,·'']]],60 ····['timing_2ecpp_52',·['timing.cpp',·['../timing_8cpp.xhtml',·1,·'']]],
61 ····['tngio_2ecpp_53',·['tngio.cpp',·['../tests_2tngio_8cpp.xhtml',·1,·'']]],61 ····['tngio_2ecpp_53',·['tngio.cpp',·['../tests_2tngio_8cpp.xhtml',·1,·'']]],
62 ····['topdirs_2ecpp_54',·['topdirs.cpp',·['../tests_2topdirs_8cpp.xhtml',·1,·'']]],62 ····['topdirs_2ecpp_54',·['topdirs.cpp',·['../tests_2topdirs_8cpp.xhtml',·1,·'']]],
63 ····['topologyhelpers_2ecpp_55',·['topologyhelpers.cpp',·['../topologyhelpers_8cpp.xhtml',·1,·'']]],63 ····['topologyhelpers_2ecpp_55',·['topologyhelpers.cpp',·['../topologyhelpers_8cpp.xhtml',·1,·'']]],
64 ····['topologyhelpers_2eh_56',·['topologyhelpers.h',·['../topologyhelpers_8h.xhtml',·1,·'']]],64 ····['topologyhelpers_2eh_56',·['topologyhelpers.h',·['../topologyhelpers_8h.xhtml',·1,·'']]],
Offset 85, 16 lines modifiedOffset 85, 16 lines modified
85 ····['trajectorycomparison_2ecpp_73',·['trajectorycomparison.cpp',·['../trajectorycomparison_8cpp.xhtml',·1,·'']]],85 ····['trajectorycomparison_2ecpp_73',·['trajectorycomparison.cpp',·['../trajectorycomparison_8cpp.xhtml',·1,·'']]],
86 ····['trajectorycomparison_2eh_74',·['trajectorycomparison.h',·['../trajectorycomparison_8h.xhtml',·1,·'']]],86 ····['trajectorycomparison_2eh_74',·['trajectorycomparison.h',·['../trajectorycomparison_8h.xhtml',·1,·'']]],
87 ····['trajectoryelement_2ecpp_75',·['trajectoryelement.cpp',·['../trajectoryelement_8cpp.xhtml',·1,·'']]],87 ····['trajectoryelement_2ecpp_75',·['trajectoryelement.cpp',·['../trajectoryelement_8cpp.xhtml',·1,·'']]],
88 ····['trajectoryelement_2eh_76',·['trajectoryelement.h',·['../trajectoryelement_8h.xhtml',·1,·'']]],88 ····['trajectoryelement_2eh_76',·['trajectoryelement.h',·['../trajectoryelement_8h.xhtml',·1,·'']]],
89 ····['trajectoryreader_2ecpp_77',·['trajectoryreader.cpp',·['../trajectoryreader_8cpp.xhtml',·1,·'']]],89 ····['trajectoryreader_2ecpp_77',·['trajectoryreader.cpp',·['../trajectoryreader_8cpp.xhtml',·1,·'']]],
90 ····['trajectoryreader_2eh_78',·['trajectoryreader.h',·['../trajectoryreader_8h.xhtml',·1,·'']]],90 ····['trajectoryreader_2eh_78',·['trajectoryreader.h',·['../trajectoryreader_8h.xhtml',·1,·'']]],
91 ····['transformationcoordinate_2eh_79',·['transformationcoordinate.h',·['../transformationcoordinate_8h.xhtml',·1,·'']]],91 ····['transformationcoordinate_2eh_79',·['transformationcoordinate.h',·['../transformationcoordinate_8h.xhtml',·1,·'']]],
92 ····['treesupport_2ecpp_80',·['treesupport.cpp',·['../treesupport_8cpp.xhtml',·1,·'(Global·Namespace)'],92 ····['treesupport_2ecpp_80',·['treesupport.cpp',·['../tests_2treesupport_8cpp.xhtml',·1,·'(Global·Namespace)'],
93 ········['../tests_2treesupport_8cpp.xhtml',·1,·'(Global·Namespace)']93 ········['../treesupport_8cpp.xhtml',·1,·'(Global·Namespace)']
94 ····]],94 ····]],
95 ····['treesupport_2eh_81',·['treesupport.h',·['../treesupport_8h.xhtml',·1,·'']]],95 ····['treesupport_2eh_81',·['treesupport.h',·['../treesupport_8h.xhtml',·1,·'']]],
96 ····['trjconv_2ecpp_82',·['trjconv.cpp',·['../tests_2trjconv_8cpp.xhtml',·1,·'']]],96 ····['trjconv_2ecpp_82',·['trjconv.cpp',·['../tests_2trjconv_8cpp.xhtml',·1,·'']]],
97 ····['trotterhelperfunctions_2eh_83',·['trotterhelperfunctions.h',·['../trotterhelperfunctions_8h.xhtml',·1,·'']]],97 ····['trotterhelperfunctions_2eh_83',·['trotterhelperfunctions.h',·['../trotterhelperfunctions_8h.xhtml',·1,·'']]],
98 ····['txtdump_2eh_84',·['txtdump.h',·['../txtdump_8h.xhtml',·1,·'']]],98 ····['txtdump_2eh_84',·['txtdump.h',·['../txtdump_8h.xhtml',·1,·'']]],
99 ····['typecasts_2ecpp_85',·['typecasts.cpp',·['../typecasts_8cpp.xhtml',·1,·'']]],99 ····['typecasts_2ecpp_85',·['typecasts.cpp',·['../typecasts_8cpp.xhtml',·1,·'']]],
100 ····['typecasts_5fcuda_5fhip_2eh_86',·['typecasts_cuda_hip.h',·['../typecasts__cuda__hip_8h.xhtml',·1,·'']]],100 ····['typecasts_5fcuda_5fhip_2eh_86',·['typecasts_cuda_hip.h',·['../typecasts__cuda__hip_8h.xhtml',·1,·'']]],
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Offset 30, 25 lines modifiedOffset 30, 25 lines modified
30 ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']30 ········['../cmdlinehelpwriter_8cpp.xhtml',·1,·'(Global·Namespace)']
31 ····]],31 ····]],
32 ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],32 ····['cmdlinehelpwriter_2eh_22',·['cmdlinehelpwriter.h',·['../cmdlinehelpwriter_8h.xhtml',·1,·'']]],
33 ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],33 ····['cmdlineinit_2ecpp_23',·['cmdlineinit.cpp',·['../cmdlineinit_8cpp.xhtml',·1,·'']]],
34 ····['cmdlineinit_2eh_24',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]],34 ····['cmdlineinit_2eh_24',·['cmdlineinit.h',·['../cmdlineinit_8h.xhtml',·1,·'']]],
35 ····['cmdlinemodule_2ecpp_25',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]],35 ····['cmdlinemodule_2ecpp_25',·['cmdlinemodule.cpp',·['../cmdlinemodule_8cpp.xhtml',·1,·'']]],
36 ····['cmdlinemodule_2eh_26',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]],36 ····['cmdlinemodule_2eh_26',·['cmdlinemodule.h',·['../cmdlinemodule_8h.xhtml',·1,·'']]],
37 ····['cmdlinemodulemanager_2ecpp_27',·['cmdlinemodulemanager.cpp',·['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'],37 ····['cmdlinemodulemanager_2ecpp_27',·['cmdlinemodulemanager.cpp',·['../tests_2cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)'],
38 ········['../tests_2cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)']38 ········['../cmdlinemodulemanager_8cpp.xhtml',·1,·'(Global·Namespace)']
39 ····]],39 ····]],
40 ····['cmdlinemodulemanager_2eh_28',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]],40 ····['cmdlinemodulemanager_2eh_28',·['cmdlinemodulemanager.h',·['../cmdlinemodulemanager_8h.xhtml',·1,·'']]],
41 ····['cmdlinemodulemanager_5fimpl_2eh_29',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]],41 ····['cmdlinemodulemanager_5fimpl_2eh_29',·['cmdlinemodulemanager_impl.h',·['../cmdlinemodulemanager__impl_8h.xhtml',·1,·'']]],
42 ····['cmdlinemodulemanagertest_2ecpp_30',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]],42 ····['cmdlinemodulemanagertest_2ecpp_30',·['cmdlinemodulemanagertest.cpp',·['../cmdlinemodulemanagertest_8cpp.xhtml',·1,·'']]],
43 ····['cmdlinemodulemanagertest_2eh_31',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]],43 ····['cmdlinemodulemanagertest_2eh_31',·['cmdlinemodulemanagertest.h',·['../cmdlinemodulemanagertest_8h.xhtml',·1,·'']]],
44 ····['cmdlineoptionsmodule_2ecpp_32',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]],44 ····['cmdlineoptionsmodule_2ecpp_32',·['cmdlineoptionsmodule.cpp',·['../cmdlineoptionsmodule_8cpp.xhtml',·1,·'']]],
45 ····['cmdlineoptionsmodule_2eh_33',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]],45 ····['cmdlineoptionsmodule_2eh_33',·['cmdlineoptionsmodule.h',·['../cmdlineoptionsmodule_8h.xhtml',·1,·'']]],
46 ····['cmdlineparser_2ecpp_34',·['cmdlineparser.cpp',·['../tests_2cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)'],46 ····['cmdlineparser_2ecpp_34',·['cmdlineparser.cpp',·['../cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)'],
47 ········['../cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)']47 ········['../tests_2cmdlineparser_8cpp.xhtml',·1,·'(Global·Namespace)']
48 ····]],48 ····]],
49 ····['cmdlineparser_2eh_35',·['cmdlineparser.h',·['../cmdlineparser_8h.xhtml',·1,·'']]],49 ····['cmdlineparser_2eh_35',·['cmdlineparser.h',·['../cmdlineparser_8h.xhtml',·1,·'']]],
50 ····['cmdlineprogramcontext_2ecpp_36',·['cmdlineprogramcontext.cpp',·['../cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)'],50 ····['cmdlineprogramcontext_2ecpp_36',·['cmdlineprogramcontext.cpp',·['../cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)'],
51 ········['../tests_2cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)']51 ········['../tests_2cmdlineprogramcontext_8cpp.xhtml',·1,·'(Global·Namespace)']
52 ····]],52 ····]],
53 ····['cmdlineprogramcontext_2eh_37',·['cmdlineprogramcontext.h',·['../cmdlineprogramcontext_8h.xhtml',·1,·'']]],53 ····['cmdlineprogramcontext_2eh_37',·['cmdlineprogramcontext.h',·['../cmdlineprogramcontext_8h.xhtml',·1,·'']]],
54 ····['cmdlinerunner_2ecpp_38',·['cmdlinerunner.cpp',·['../tests_2cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)'],54 ····['cmdlinerunner_2ecpp_38',·['cmdlinerunner.cpp',·['../tests_2cmdlinerunner_8cpp.xhtml',·1,·'(Global·Namespace)'],
Offset 69, 16 lines modifiedOffset 69, 16 lines modified
69 ····['colvarsmdmodule_2ecpp_49',·['colvarsMDModule.cpp',·['../colvarsMDModule_8cpp.xhtml',·1,·'']]],69 ····['colvarsmdmodule_2ecpp_49',·['colvarsMDModule.cpp',·['../colvarsMDModule_8cpp.xhtml',·1,·'']]],
70 ····['colvarsmdmodule_2eh_50',·['colvarsMDModule.h',·['../colvarsMDModule_8h.xhtml',·1,·'']]],70 ····['colvarsmdmodule_2eh_50',·['colvarsMDModule.h',·['../colvarsMDModule_8h.xhtml',·1,·'']]],
71 ····['colvarsmdmodule_5fstub_2ecpp_51',·['colvarsMDModule_stub.cpp',·['../colvarsMDModule__stub_8cpp.xhtml',·1,·'']]],71 ····['colvarsmdmodule_5fstub_2ecpp_51',·['colvarsMDModule_stub.cpp',·['../colvarsMDModule__stub_8cpp.xhtml',·1,·'']]],
72 ····['colvarsoptions_2ecpp_52',·['colvarsoptions.cpp',·['../tests_2colvarsoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],72 ····['colvarsoptions_2ecpp_52',·['colvarsoptions.cpp',·['../tests_2colvarsoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
73 ········['../colvarsoptions_8cpp.xhtml',·1,·'(Global·Namespace)']73 ········['../colvarsoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
74 ····]],74 ····]],
75 ····['colvarsoptions_2eh_53',·['colvarsoptions.h',·['../colvarsoptions_8h.xhtml',·1,·'']]],75 ····['colvarsoptions_2eh_53',·['colvarsoptions.h',·['../colvarsoptions_8h.xhtml',·1,·'']]],
76 ····['colvarspreprocessor_2ecpp_54',·['colvarspreprocessor.cpp',·['../tests_2colvarspreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],76 ····['colvarspreprocessor_2ecpp_54',·['colvarspreprocessor.cpp',·['../colvarspreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],
77 ········['../colvarspreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']77 ········['../tests_2colvarspreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']
78 ····]],78 ····]],
79 ····['colvarspreprocessor_2eh_55',·['colvarspreprocessor.h',·['../colvarspreprocessor_8h.xhtml',·1,·'']]],79 ····['colvarspreprocessor_2eh_55',·['colvarspreprocessor.h',·['../colvarspreprocessor_8h.xhtml',·1,·'']]],
80 ····['colvarssimulationsparameters_2ecpp_56',·['colvarssimulationsparameters.cpp',·['../colvarssimulationsparameters_8cpp.xhtml',·1,·'']]],80 ····['colvarssimulationsparameters_2ecpp_56',·['colvarssimulationsparameters.cpp',·['../colvarssimulationsparameters_8cpp.xhtml',·1,·'']]],
81 ····['colvarssimulationsparameters_2eh_57',·['colvarssimulationsparameters.h',·['../colvarssimulationsparameters_8h.xhtml',·1,·'']]],81 ····['colvarssimulationsparameters_2eh_57',·['colvarssimulationsparameters.h',·['../colvarssimulationsparameters_8h.xhtml',·1,·'']]],
82 ····['com_2ecpp_58',·['com.cpp',·['../com_8cpp.xhtml',·1,·'(Global·Namespace)'],82 ····['com_2ecpp_58',·['com.cpp',·['../com_8cpp.xhtml',·1,·'(Global·Namespace)'],
83 ········['../tests_2com_8cpp.xhtml',·1,·'(Global·Namespace)']83 ········['../tests_2com_8cpp.xhtml',·1,·'(Global·Namespace)']
84 ····]],84 ····]],
Offset 109, 27 lines modifiedOffset 109, 27 lines modified
109 ····['constrtestdata_2eh_81',·['constrtestdata.h',·['../constrtestdata_8h.xhtml',·1,·'']]],109 ····['constrtestdata_2eh_81',·['constrtestdata.h',·['../constrtestdata_8h.xhtml',·1,·'']]],
110 ····['constrtestrunners_2ecpp_82',·['constrtestrunners.cpp',·['../constrtestrunners_8cpp.xhtml',·1,·'']]],110 ····['constrtestrunners_2ecpp_82',·['constrtestrunners.cpp',·['../constrtestrunners_8cpp.xhtml',·1,·'']]],
111 ····['constrtestrunners_2eh_83',·['constrtestrunners.h',·['../constrtestrunners_8h.xhtml',·1,·'']]],111 ····['constrtestrunners_2eh_83',·['constrtestrunners.h',·['../constrtestrunners_8h.xhtml',·1,·'']]],
112 ····['constrtestrunners_5fgpu_2ecpp_84',·['constrtestrunners_gpu.cpp',·['../constrtestrunners__gpu_8cpp.xhtml',·1,·'']]],112 ····['constrtestrunners_5fgpu_2ecpp_84',·['constrtestrunners_gpu.cpp',·['../constrtestrunners__gpu_8cpp.xhtml',·1,·'']]],
113 ····['convert_2dtpr_2dfixture_2eh_85',·['convert-tpr-fixture.h',·['../convert-tpr-fixture_8h.xhtml',·1,·'']]],113 ····['convert_2dtpr_2dfixture_2eh_85',·['convert-tpr-fixture.h',·['../convert-tpr-fixture_8h.xhtml',·1,·'']]],
114 ····['convert_2dtpr_2dwith_2dleaks_2ecpp_86',·['convert-tpr-with-leaks.cpp',·['../convert-tpr-with-leaks_8cpp.xhtml',·1,·'']]],114 ····['convert_2dtpr_2dwith_2dleaks_2ecpp_86',·['convert-tpr-with-leaks.cpp',·['../convert-tpr-with-leaks_8cpp.xhtml',·1,·'']]],
115 ····['convert_2dtpr_2ecpp_87',·['convert-tpr.cpp',·['../convert-tpr_8cpp.xhtml',·1,·'']]],115 ····['convert_2dtpr_2ecpp_87',·['convert-tpr.cpp',·['../convert-tpr_8cpp.xhtml',·1,·'']]],
116 ····['convert_5ftrj_2ecpp_88',·['convert_trj.cpp',·['../tests_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)'],116 ····['convert_5ftrj_2ecpp_88',·['convert_trj.cpp',·['../modules_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)'],
117 ········['../modules_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)']117 ········['../tests_2convert__trj_8cpp.xhtml',·1,·'(Global·Namespace)']
118 ····]],118 ····]],
119 ····['convert_5ftrj_2eh_89',·['convert_trj.h',·['../convert__trj_8h.xhtml',·1,·'']]],119 ····['convert_5ftrj_2eh_89',·['convert_trj.h',·['../convert__trj_8h.xhtml',·1,·'']]],
120 ····['convparm_2ecpp_90',·['convparm.cpp',·['../tests_2convparm_8cpp.xhtml',·1,·'']]],120 ····['convparm_2ecpp_90',·['convparm.cpp',·['../tests_2convparm_8cpp.xhtml',·1,·'']]],
121 ····['coolstuff_2ecpp_91',·['coolstuff.cpp',·['../coolstuff_8cpp.xhtml',·1,·'']]],121 ····['coolstuff_2ecpp_91',·['coolstuff.cpp',·['../coolstuff_8cpp.xhtml',·1,·'']]],
122 ····['coolstuff_2eh_92',·['coolstuff.h',·['../coolstuff_8h.xhtml',·1,·'']]],122 ····['coolstuff_2eh_92',·['coolstuff.h',·['../coolstuff_8h.xhtml',·1,·'']]],
123 ····['coordinate_5ftest_2eh_93',·['coordinate_test.h',·['../coordinate__test_8h.xhtml',·1,·'']]],123 ····['coordinate_5ftest_2eh_93',·['coordinate_test.h',·['../coordinate__test_8h.xhtml',·1,·'']]],
124 ····['coordinatefile_2ecpp_94',·['coordinatefile.cpp',·['../coordinatefile_8cpp.xhtml',·1,·'']]],124 ····['coordinatefile_2ecpp_94',·['coordinatefile.cpp',·['../coordinatefile_8cpp.xhtml',·1,·'']]],
125 ····['coordinatefile_2eh_95',·['coordinatefile.h',·['../coordinatefile_8h.xhtml',·1,·'']]],125 ····['coordinatefile_2eh_95',·['coordinatefile.h',·['../coordinatefile_8h.xhtml',·1,·'']]],
126 ····['coordinatefileenums_2eh_96',·['coordinatefileenums.h',·['../coordinatefileenums_8h.xhtml',·1,·'']]],126 ····['coordinatefileenums_2eh_96',·['coordinatefileenums.h',·['../coordinatefileenums_8h.xhtml',·1,·'']]],
127 ····['coordinatetransformation_2ecpp_97',·['coordinatetransformation.cpp',·['../coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)'],127 ····['coordinatetransformation_2ecpp_97',·['coordinatetransformation.cpp',·['../tests_2coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)'],
128 ········['../tests_2coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)']128 ········['../coordinatetransformation_8cpp.xhtml',·1,·'(Global·Namespace)']
129 ····]],129 ····]],
130 ····['coordinatetransformation_2eh_98',·['coordinatetransformation.h',·['../coordinatetransformation_8h.xhtml',·1,·'']]],130 ····['coordinatetransformation_2eh_98',·['coordinatetransformation.h',·['../coordinatetransformation_8h.xhtml',·1,·'']]],
131 ····['coordstate_2ecpp_99',·['coordstate.cpp',·['../coordstate_8cpp.xhtml',·1,·'']]],131 ····['coordstate_2ecpp_99',·['coordstate.cpp',·['../coordstate_8cpp.xhtml',·1,·'']]],
132 ····['coordstate_2eh_100',·['coordstate.h',·['../coordstate_8h.xhtml',·1,·'']]],132 ····['coordstate_2eh_100',·['coordstate.h',·['../coordstate_8h.xhtml',·1,·'']]],
133 ····['correlationdataset_2ecpp_101',·['correlationdataset.cpp',·['../correlationdataset_8cpp.xhtml',·1,·'']]],133 ····['correlationdataset_2ecpp_101',·['correlationdataset.cpp',·['../correlationdataset_8cpp.xhtml',·1,·'']]],
134 ····['correlationdataset_2eh_102',·['correlationdataset.h',·['../correlationdataset_8h.xhtml',·1,·'']]],134 ····['correlationdataset_2eh_102',·['correlationdataset.h',·['../correlationdataset_8h.xhtml',·1,·'']]],
135 ····['correlationgrid_2ecpp_103',·['correlationgrid.cpp',·['../correlationgrid_8cpp.xhtml',·1,·'']]],135 ····['correlationgrid_2ecpp_103',·['correlationgrid.cpp',·['../correlationgrid_8cpp.xhtml',·1,·'']]],
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Offset 20, 32 lines modifiedOffset 20, 32 lines modified
20 ····['decidesimulationworkload_2eh_18',·['decidesimulationworkload.h',·['../decidesimulationworkload_8h.xhtml',·1,·'']]],20 ····['decidesimulationworkload_2eh_18',·['decidesimulationworkload.h',·['../decidesimulationworkload_8h.xhtml',·1,·'']]],
21 ····['defaultinitializationallocator_2ecpp_19',·['defaultinitializationallocator.cpp',·['../defaultinitializationallocator_8cpp.xhtml',·1,·'']]],21 ····['defaultinitializationallocator_2ecpp_19',·['defaultinitializationallocator.cpp',·['../defaultinitializationallocator_8cpp.xhtml',·1,·'']]],
22 ····['defaultinitializationallocator_2eh_20',·['defaultinitializationallocator.h',·['../defaultinitializationallocator_8h.xhtml',·1,·'']]],22 ····['defaultinitializationallocator_2eh_20',·['defaultinitializationallocator.h',·['../defaultinitializationallocator_8h.xhtml',·1,·'']]],
23 ····['densityfit_2ecpp_21',·['densityfit.cpp',·['../densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'],23 ····['densityfit_2ecpp_21',·['densityfit.cpp',·['../densityfit_8cpp.xhtml',·1,·'(Global·Namespace)'],
24 ········['../tests_2densityfit_8cpp.xhtml',·1,·'(Global·Namespace)']24 ········['../tests_2densityfit_8cpp.xhtml',·1,·'(Global·Namespace)']
25 ····]],25 ····]],
26 ····['densityfit_2eh_22',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]],26 ····['densityfit_2eh_22',·['densityfit.h',·['../densityfit_8h.xhtml',·1,·'']]],
27 ····['densityfitting_2ecpp_23',·['densityfitting.cpp',·['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'],27 ····['densityfitting_2ecpp_23',·['densityfitting.cpp',·['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)'],
28 ········['../densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)']28 ········['../tests_2densityfitting_8cpp.xhtml',·1,·'(Global·Namespace)']
29 ····]],29 ····]],
30 ····['densityfittingamplitudelookup_2ecpp_24',·['densityfittingamplitudelookup.cpp',·['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],30 ····['densityfittingamplitudelookup_2ecpp_24',·['densityfittingamplitudelookup.cpp',·['../densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)'],
31 ········['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']31 ········['../tests_2densityfittingamplitudelookup_8cpp.xhtml',·1,·'(Global·Namespace)']
32 ····]],32 ····]],
33 ····['densityfittingamplitudelookup_2eh_25',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],33 ····['densityfittingamplitudelookup_2eh_25',·['densityfittingamplitudelookup.h',·['../densityfittingamplitudelookup_8h.xhtml',·1,·'']]],
34 ····['densityfittingforce_2ecpp_26',·['densityfittingforce.cpp',·['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],34 ····['densityfittingforce_2ecpp_26',·['densityfittingforce.cpp',·['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)'],
35 ········['../densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']35 ········['../tests_2densityfittingforce_8cpp.xhtml',·1,·'(Global·Namespace)']
36 ····]],36 ····]],
37 ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],37 ····['densityfittingforce_2eh_27',·['densityfittingforce.h',·['../densityfittingforce_8h.xhtml',·1,·'']]],
38 ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],38 ····['densityfittingforceprovider_2ecpp_28',·['densityfittingforceprovider.cpp',·['../tests_2densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
39 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']39 ········['../densityfittingforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
40 ····]],40 ····]],
41 ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],41 ····['densityfittingforceprovider_2eh_29',·['densityfittingforceprovider.h',·['../densityfittingforceprovider_8h.xhtml',·1,·'']]],
42 ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],42 ····['densityfittingmodule_2ecpp_30',·['densityfittingmodule.cpp',·['../densityfittingmodule_8cpp.xhtml',·1,·'']]],
43 ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],43 ····['densityfittingoptions_2ecpp_31',·['densityfittingoptions.cpp',·['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
44 ········['../tests_2densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']44 ········['../densityfittingoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
45 ····]],45 ····]],
46 ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],46 ····['densityfittingoptions_2eh_32',·['densityfittingoptions.h',·['../densityfittingoptions_8h.xhtml',·1,·'']]],
47 ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],47 ····['densityfittingoutputprovider_2ecpp_33',·['densityfittingoutputprovider.cpp',·['../densityfittingoutputprovider_8cpp.xhtml',·1,·'']]],
48 ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],48 ····['densityfittingoutputprovider_2eh_34',·['densityfittingoutputprovider.h',·['../densityfittingoutputprovider_8h.xhtml',·1,·'']]],
49 ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],49 ····['densityfittingparameters_2eh_35',·['densityfittingparameters.h',·['../densityfittingparameters_8h.xhtml',·1,·'']]],
50 ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]],50 ····['device_5favailability_2ecpp_36',·['device_availability.cpp',·['../device__availability_8cpp.xhtml',·1,·'']]],
51 ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]],51 ····['device_5fbuffer_2ecpp_37',·['device_buffer.cpp',·['../device__buffer_8cpp.xhtml',·1,·'']]],
Offset 69, 16 lines modifiedOffset 69, 16 lines modified
69 ····['device_5fmanagement_5fshared_5famd_2eh_53',·['device_management_shared_amd.h',·['../device__management__shared__amd_8h.xhtml',·1,·'']]],69 ····['device_5fmanagement_5fshared_5famd_2eh_53',·['device_management_shared_amd.h',·['../device__management__shared__amd_8h.xhtml',·1,·'']]],
70 ····['device_5fmanagement_5fsycl_2ecpp_54',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],70 ····['device_5fmanagement_5fsycl_2ecpp_54',·['device_management_sycl.cpp',·['../device__management__sycl_8cpp.xhtml',·1,·'']]],
71 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_55',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],71 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2ecpp_55',·['device_management_sycl_intel_device_ids.cpp',·['../device__management__sycl__intel__device__ids_8cpp.xhtml',·1,·'']]],
72 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_56',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],72 ····['device_5fmanagement_5fsycl_5fintel_5fdevice_5fids_2eh_56',·['device_management_sycl_intel_device_ids.h',·['../device__management__sycl__intel__device__ids_8h.xhtml',·1,·'']]],
73 ····['device_5fstream_2ecpp_57',·['device_stream.cpp',·['../device__stream_8cpp.xhtml',·1,·'']]],73 ····['device_5fstream_2ecpp_57',·['device_stream.cpp',·['../device__stream_8cpp.xhtml',·1,·'']]],
74 ····['device_5fstream_2eh_58',·['device_stream.h',·['../device__stream_8h.xhtml',·1,·'']]],74 ····['device_5fstream_2eh_58',·['device_stream.h',·['../device__stream_8h.xhtml',·1,·'']]],
75 ····['device_5fstream_5fhip_2ecpp_59',·['device_stream_hip.cpp',·['../device__stream__hip_8cpp.xhtml',·1,·'']]],75 ····['device_5fstream_5fhip_2ecpp_59',·['device_stream_hip.cpp',·['../device__stream__hip_8cpp.xhtml',·1,·'']]],
76 ····['device_5fstream_5fmanager_2ecpp_60',·['device_stream_manager.cpp',·['../device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)'],76 ····['device_5fstream_5fmanager_2ecpp_60',·['device_stream_manager.cpp',·['../tests_2device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)'],
77 ········['../tests_2device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)']77 ········['../device__stream__manager_8cpp.xhtml',·1,·'(Global·Namespace)']
78 ····]],78 ····]],
79 ····['device_5fstream_5fmanager_2eh_61',·['device_stream_manager.h',·['../device__stream__manager_8h.xhtml',·1,·'']]],79 ····['device_5fstream_5fmanager_2eh_61',·['device_stream_manager.h',·['../device__stream__manager_8h.xhtml',·1,·'']]],
80 ····['device_5fstream_5focl_2ecpp_62',·['device_stream_ocl.cpp',·['../device__stream__ocl_8cpp.xhtml',·1,·'']]],80 ····['device_5fstream_5focl_2ecpp_62',·['device_stream_ocl.cpp',·['../device__stream__ocl_8cpp.xhtml',·1,·'']]],
81 ····['device_5fstream_5fsycl_2ecpp_63',·['device_stream_sycl.cpp',·['../device__stream__sycl_8cpp.xhtml',·1,·'']]],81 ····['device_5fstream_5fsycl_2ecpp_63',·['device_stream_sycl.cpp',·['../device__stream__sycl_8cpp.xhtml',·1,·'']]],
82 ····['devicebuffer_2eh_64',·['devicebuffer.h',·['../devicebuffer_8h.xhtml',·1,·'']]],82 ····['devicebuffer_2eh_64',·['devicebuffer.h',·['../devicebuffer_8h.xhtml',·1,·'']]],
83 ····['devicebuffer_5fdatatype_2eh_65',·['devicebuffer_datatype.h',·['../devicebuffer__datatype_8h.xhtml',·1,·'']]],83 ····['devicebuffer_5fdatatype_2eh_65',·['devicebuffer_datatype.h',·['../devicebuffer__datatype_8h.xhtml',·1,·'']]],
84 ····['devicebuffer_5fhip_2eh_66',·['devicebuffer_hip.h',·['../devicebuffer__hip_8h.xhtml',·1,·'']]],84 ····['devicebuffer_5fhip_2eh_66',·['devicebuffer_hip.h',·['../devicebuffer__hip_8h.xhtml',·1,·'']]],
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8 ····['enerdata_2ecpp_4',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],8 ····['enerdata_2ecpp_4',·['enerdata.cpp',·['../enerdata_8cpp.xhtml',·1,·'']]],
9 ····['energyanalysisframe_2eh_5',·['energyanalysisframe.h',·['../energyanalysisframe_8h.xhtml',·1,·'']]],9 ····['energyanalysisframe_2eh_5',·['energyanalysisframe.h',·['../energyanalysisframe_8h.xhtml',·1,·'']]],
10 ····['energycomparison_2ecpp_6',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],10 ····['energycomparison_2ecpp_6',·['energycomparison.cpp',·['../energycomparison_8cpp.xhtml',·1,·'']]],
11 ····['energycomparison_2eh_7',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],11 ····['energycomparison_2eh_7',·['energycomparison.h',·['../energycomparison_8h.xhtml',·1,·'']]],
12 ····['energydata_2ecpp_8',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],12 ····['energydata_2ecpp_8',·['energydata.cpp',·['../energydata_8cpp.xhtml',·1,·'']]],
13 ····['energydata_2eh_9',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],13 ····['energydata_2eh_9',·['energydata.h',·['../energydata_8h.xhtml',·1,·'']]],
14 ····['energydrifttracker_2ecpp_10',·['energydrifttracker.cpp',·['../tests_2energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)'],14 ····['energydrifttracker_2ecpp_10',·['energydrifttracker.cpp',·['../energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)'],
15 ········['../energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)']15 ········['../tests_2energydrifttracker_8cpp.xhtml',·1,·'(Global·Namespace)']
16 ····]],16 ····]],
17 ····['energydrifttracker_2eh_11',·['energydrifttracker.h',·['../energydrifttracker_8h.xhtml',·1,·'']]],17 ····['energydrifttracker_2eh_11',·['energydrifttracker.h',·['../energydrifttracker_8h.xhtml',·1,·'']]],
18 ····['energyframe_2ecpp_12',·['energyframe.cpp',·['../energyframe_8cpp.xhtml',·1,·'']]],18 ····['energyframe_2ecpp_12',·['energyframe.cpp',·['../energyframe_8cpp.xhtml',·1,·'']]],
19 ····['energyhistory_2eh_13',·['energyhistory.h',·['../energyhistory_8h.xhtml',·1,·'']]],19 ····['energyhistory_2eh_13',·['energyhistory.h',·['../energyhistory_8h.xhtml',·1,·'']]],
20 ····['energyoutput_2ecpp_14',·['energyoutput.cpp',·['../energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)'],20 ····['energyoutput_2ecpp_14',·['energyoutput.cpp',·['../tests_2energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)'],
21 ········['../tests_2energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)']21 ········['../energyoutput_8cpp.xhtml',·1,·'(Global·Namespace)']
22 ····]],22 ····]],
23 ····['energyoutput_2eh_15',·['energyoutput.h',·['../energyoutput_8h.xhtml',·1,·'']]],23 ····['energyoutput_2eh_15',·['energyoutput.h',·['../energyoutput_8h.xhtml',·1,·'']]],
24 ····['energyreader_2ecpp_16',·['energyreader.cpp',·['../energyreader_8cpp.xhtml',·1,·'']]],24 ····['energyreader_2ecpp_16',·['energyreader.cpp',·['../energyreader_8cpp.xhtml',·1,·'']]],
25 ····['energyreader_2eh_17',·['energyreader.h',·['../energyreader_8h.xhtml',·1,·'']]],25 ····['energyreader_2eh_17',·['energyreader.h',·['../energyreader_8h.xhtml',·1,·'']]],
26 ····['energyterm_2ecpp_18',·['energyterm.cpp',·['../tests_2energyterm_8cpp.xhtml',·1,·'(Global·Namespace)'],26 ····['energyterm_2ecpp_18',·['energyterm.cpp',·['../tests_2energyterm_8cpp.xhtml',·1,·'(Global·Namespace)'],
27 ········['../energyterm_8cpp.xhtml',·1,·'(Global·Namespace)']27 ········['../energyterm_8cpp.xhtml',·1,·'(Global·Namespace)']
28 ····]],28 ····]],
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41 ····['forcetable_2eh_33',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]],41 ····['forcetable_2eh_33',·['forcetable.h',·['../forcetable_8h.xhtml',·1,·'']]],
42 ····['frameaverager_2ecpp_34',·['frameaverager.cpp',·['../frameaverager_8cpp.xhtml',·1,·'']]],42 ····['frameaverager_2ecpp_34',·['frameaverager.cpp',·['../frameaverager_8cpp.xhtml',·1,·'']]],
43 ····['frameaverager_2eh_35',·['frameaverager.h',·['../frameaverager_8h.xhtml',·1,·'']]],43 ····['frameaverager_2eh_35',·['frameaverager.h',·['../frameaverager_8h.xhtml',·1,·'']]],
44 ····['frameconverter_2eh_36',·['frameconverter.h',·['../frameconverter_8h.xhtml',·1,·'']]],44 ····['frameconverter_2eh_36',·['frameconverter.h',·['../frameconverter_8h.xhtml',·1,·'']]],
45 ····['frameconverterenums_2eh_37',·['frameconverterenums.h',·['../frameconverterenums_8h.xhtml',·1,·'']]],45 ····['frameconverterenums_2eh_37',·['frameconverterenums.h',·['../frameconverterenums_8h.xhtml',·1,·'']]],
46 ····['framelocaldata_2eh_38',·['framelocaldata.h',·['../framelocaldata_8h.xhtml',·1,·'']]],46 ····['framelocaldata_2eh_38',·['framelocaldata.h',·['../framelocaldata_8h.xhtml',·1,·'']]],
47 ····['freeenergy_2ecpp_39',·['freeenergy.cpp',·['../programs_2mdrun_2tests_2freeenergy_8cpp.xhtml',·1,·'(Global·Namespace)'],47 ····['freeenergy_2ecpp_39',·['freeenergy.cpp',·['../gromacs_2mdrunutility_2freeenergy_8cpp.xhtml',·1,·'(Global·Namespace)'],
48 ········['../gromacs_2mdrunutility_2freeenergy_8cpp.xhtml',·1,·'(Global·Namespace)']48 ········['../programs_2mdrun_2tests_2freeenergy_8cpp.xhtml',·1,·'(Global·Namespace)']
49 ····]],49 ····]],
50 ····['freeenergy_2eh_40',·['freeenergy.h',·['../freeenergy_8h.xhtml',·1,·'']]],50 ····['freeenergy_2eh_40',·['freeenergy.h',·['../freeenergy_8h.xhtml',·1,·'']]],
51 ····['freeenergydispatch_2eh_41',·['freeenergydispatch.h',·['../freeenergydispatch_8h.xhtml',·1,·'']]],51 ····['freeenergydispatch_2eh_41',·['freeenergydispatch.h',·['../freeenergydispatch_8h.xhtml',·1,·'']]],
52 ····['freeenergyparameters_2ecpp_42',·['freeenergyparameters.cpp',·['../tests_2freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)'],52 ····['freeenergyparameters_2ecpp_42',·['freeenergyparameters.cpp',·['../tests_2freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)'],
53 ········['../freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)']53 ········['../freeenergyparameters_8cpp.xhtml',·1,·'(Global·Namespace)']
54 ····]],54 ····]],
55 ····['freeenergyparameters_2eh_43',·['freeenergyparameters.h',·['../freeenergyparameters_8h.xhtml',·1,·'']]],55 ····['freeenergyparameters_2eh_43',·['freeenergyparameters.h',·['../freeenergyparameters_8h.xhtml',·1,·'']]],
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4 ····['haloexchange_2ecpp_2',·['haloexchange.cpp',·['../haloexchange_8cpp.xhtml',·1,·'']]],4 ····['haloexchange_2ecpp_2',·['haloexchange.cpp',·['../haloexchange_8cpp.xhtml',·1,·'']]],
5 ····['haloexchange_2eh_3',·['haloexchange.h',·['../haloexchange_8h.xhtml',·1,·'']]],5 ····['haloexchange_2eh_3',·['haloexchange.h',·['../haloexchange_8h.xhtml',·1,·'']]],
6 ····['haloexchange_5fmpi_2ecpp_4',·['haloexchange_mpi.cpp',·['../haloexchange__mpi_8cpp.xhtml',·1,·'']]],6 ····['haloexchange_5fmpi_2ecpp_4',·['haloexchange_mpi.cpp',·['../haloexchange__mpi_8cpp.xhtml',·1,·'']]],
7 ····['haloexchangesetup_2ecpp_5',·['haloexchangesetup.cpp',·['../haloexchangesetup_8cpp.xhtml',·1,·'']]],7 ····['haloexchangesetup_2ecpp_5',·['haloexchangesetup.cpp',·['../haloexchangesetup_8cpp.xhtml',·1,·'']]],
8 ····['handlerestart_2ecpp_6',·['handlerestart.cpp',·['../handlerestart_8cpp.xhtml',·1,·'']]],8 ····['handlerestart_2ecpp_6',·['handlerestart.cpp',·['../handlerestart_8cpp.xhtml',·1,·'']]],
9 ····['handlerestart_2eh_7',·['handlerestart.h',·['../handlerestart_8h.xhtml',·1,·'']]],9 ····['handlerestart_2eh_7',·['handlerestart.h',·['../handlerestart_8h.xhtml',·1,·'']]],
10 ····['hardwaretopology_2ecpp_8',·['hardwaretopology.cpp',·['../tests_2hardwaretopology_8cpp.xhtml',·1,·'(Global·Namespace)'],10 ····['hardwaretopology_2ecpp_8',·['hardwaretopology.cpp',·['../hardwaretopology_8cpp.xhtml',·1,·'(Global·Namespace)'],
11 ········['../hardwaretopology_8cpp.xhtml',·1,·'(Global·Namespace)']11 ········['../tests_2hardwaretopology_8cpp.xhtml',·1,·'(Global·Namespace)']
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14 ····['hashedmap_2ecpp_10',·['hashedmap.cpp',·['../hashedmap_8cpp.xhtml',·1,·'']]],14 ····['hashedmap_2ecpp_10',·['hashedmap.cpp',·['../hashedmap_8cpp.xhtml',·1,·'']]],
15 ····['hashedmap_2eh_11',·['hashedmap.h',·['../hashedmap_8h.xhtml',·1,·'']]],15 ····['hashedmap_2eh_11',·['hashedmap.h',·['../hashedmap_8h.xhtml',·1,·'']]],
16 ····['hbond_2ecpp_12',·['hbond.cpp',·['../tests_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)'],16 ····['hbond_2ecpp_12',·['hbond.cpp',·['../modules_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)'],
17 ········['../modules_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)']17 ········['../tests_2hbond_8cpp.xhtml',·1,·'(Global·Namespace)']
18 ····]],18 ····]],
19 ····['hbond_2eh_13',·['hbond.h',·['../hbond_8h.xhtml',·1,·'']]],19 ····['hbond_2eh_13',·['hbond.h',·['../hbond_8h.xhtml',·1,·'']]],
20 ····['helpformat_2ecpp_14',·['helpformat.cpp',·['../tests_2helpformat_8cpp.xhtml',·1,·'(Global·Namespace)'],20 ····['helpformat_2ecpp_14',·['helpformat.cpp',·['../helpformat_8cpp.xhtml',·1,·'(Global·Namespace)'],
21 ········['../helpformat_8cpp.xhtml',·1,·'(Global·Namespace)']21 ········['../tests_2helpformat_8cpp.xhtml',·1,·'(Global·Namespace)']
22 ····]],22 ····]],
23 ····['helpformat_2eh_15',·['helpformat.h',·['../helpformat_8h.xhtml',·1,·'']]],23 ····['helpformat_2eh_15',·['helpformat.h',·['../helpformat_8h.xhtml',·1,·'']]],
24 ····['helpmanager_2ecpp_16',·['helpmanager.cpp',·['../helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)'],24 ····['helpmanager_2ecpp_16',·['helpmanager.cpp',·['../helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)'],
25 ········['../tests_2helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)']25 ········['../tests_2helpmanager_8cpp.xhtml',·1,·'(Global·Namespace)']
26 ····]],26 ····]],
27 ····['helpmanager_2eh_17',·['helpmanager.h',·['../helpmanager_8h.xhtml',·1,·'']]],27 ····['helpmanager_2eh_17',·['helpmanager.h',·['../helpmanager_8h.xhtml',·1,·'']]],
28 ····['helptopic_2ecpp_18',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]],28 ····['helptopic_2ecpp_18',·['helptopic.cpp',·['../helptopic_8cpp.xhtml',·1,·'']]],
29 ····['helptopic_2eh_19',·['helptopic.h',·['../helptopic_8h.xhtml',·1,·'']]],29 ····['helptopic_2eh_19',·['helptopic.h',·['../helptopic_8h.xhtml',·1,·'']]],
30 ····['helpwritercontext_2ecpp_20',·['helpwritercontext.cpp',·['../tests_2helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)'],30 ····['helpwritercontext_2ecpp_20',·['helpwritercontext.cpp',·['../helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)'],
31 ········['../helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)']31 ········['../tests_2helpwritercontext_8cpp.xhtml',·1,·'(Global·Namespace)']
32 ····]],32 ····]],
33 ····['helpwritercontext_2eh_21',·['helpwritercontext.h',·['../helpwritercontext_8h.xhtml',·1,·'']]],33 ····['helpwritercontext_2eh_21',·['helpwritercontext.h',·['../helpwritercontext_8h.xhtml',·1,·'']]],
34 ····['helpwriting_2ecpp_22',·['helpwriting.cpp',·['../gromacs_2tools_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)'],34 ····['helpwriting_2ecpp_22',·['helpwriting.cpp',·['../programs_2mdrun_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)'],
35 ········['../programs_2mdrun_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)']35 ········['../gromacs_2tools_2tests_2helpwriting_8cpp.xhtml',·1,·'(Global·Namespace)']
36 ····]],36 ····]],
37 ····['hip_5fkernel_5futils_2eh_23',·['hip_kernel_utils.h',·['../hip__kernel__utils_8h.xhtml',·1,·'']]],37 ····['hip_5fkernel_5futils_2eh_23',·['hip_kernel_utils.h',·['../hip__kernel__utils_8h.xhtml',·1,·'']]],
38 ····['hip_5fsycl_5fkernel_5futils_2eh_24',·['hip_sycl_kernel_utils.h',·['../hip__sycl__kernel__utils_8h.xhtml',·1,·'']]],38 ····['hip_5fsycl_5fkernel_5futils_2eh_24',·['hip_sycl_kernel_utils.h',·['../hip__sycl__kernel__utils_8h.xhtml',·1,·'']]],
39 ····['histogram_2ecpp_25',·['histogram.cpp',·['../tests_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)'],39 ····['histogram_2ecpp_25',·['histogram.cpp',·['../tests_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)'],
40 ········['../modules_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)']40 ········['../modules_2histogram_8cpp.xhtml',·1,·'(Global·Namespace)']
41 ····]],41 ····]],
42 ····['histogram_2eh_26',·['histogram.h',·['../histogram_8h.xhtml',·1,·'']]],42 ····['histogram_2eh_26',·['histogram.h',·['../histogram_8h.xhtml',·1,·'']]],
43 ····['histogramsize_2ecpp_27',·['histogramsize.cpp',·['../histogramsize_8cpp.xhtml',·1,·'']]],43 ····['histogramsize_2ecpp_27',·['histogramsize.cpp',·['../histogramsize_8cpp.xhtml',·1,·'']]],
44 ····['histogramsize_2eh_28',·['histogramsize.h',·['../histogramsize_8h.xhtml',·1,·'']]],44 ····['histogramsize_2eh_28',·['histogramsize.h',·['../histogramsize_8h.xhtml',·1,·'']]],
45 ····['hostallocator_2ecpp_29',·['hostallocator.cpp',·['../hostallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],45 ····['hostallocator_2ecpp_29',·['hostallocator.cpp',·['../tests_2hostallocator_8cpp.xhtml',·1,·'(Global·Namespace)'],
46 ········['../tests_2hostallocator_8cpp.xhtml',·1,·'(Global·Namespace)']46 ········['../hostallocator_8cpp.xhtml',·1,·'(Global·Namespace)']
47 ····]],47 ····]],
48 ····['hostallocator_2eh_30',·['hostallocator.h',·['../hostallocator_8h.xhtml',·1,·'']]],48 ····['hostallocator_2eh_30',·['hostallocator.h',·['../hostallocator_8h.xhtml',·1,·'']]],
49 ····['hsimd_5fdeclarations_2eh_31',·['hsimd_declarations.h',·['../hsimd__declarations_8h.xhtml',·1,·'']]]49 ····['hsimd_5fdeclarations_2eh_31',·['hsimd_declarations.h',·['../hsimd__declarations_8h.xhtml',·1,·'']]]
50 ];50 ];
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4 ····['makebondedlinks_2eh_2',·['makebondedlinks.h',·['../makebondedlinks_8h.xhtml',·1,·'']]],4 ····['makebondedlinks_2eh_2',·['makebondedlinks.h',·['../makebondedlinks_8h.xhtml',·1,·'']]],
5 ····['makeconstraints_2eh_3',·['makeconstraints.h',·['../makeconstraints_8h.xhtml',·1,·'']]],5 ····['makeconstraints_2eh_3',·['makeconstraints.h',·['../makeconstraints_8h.xhtml',·1,·'']]],
6 ····['manage_5fthreading_2ecpp_4',·['manage_threading.cpp',·['../manage__threading_8cpp.xhtml',·1,·'']]],6 ····['manage_5fthreading_2ecpp_4',·['manage_threading.cpp',·['../manage__threading_8cpp.xhtml',·1,·'']]],
7 ····['manage_5fthreading_2eh_5',·['manage_threading.h',·['../manage__threading_8h.xhtml',·1,·'']]],7 ····['manage_5fthreading_2eh_5',·['manage_threading.h',·['../manage__threading_8h.xhtml',·1,·'']]],
8 ····['manager_2ecpp_6',·['manager.cpp',·['../manager_8cpp.xhtml',·1,·'']]],8 ····['manager_2ecpp_6',·['manager.cpp',·['../manager_8cpp.xhtml',·1,·'']]],
9 ····['manager_2eh_7',·['manager.h',·['../manager_8h.xhtml',·1,·'']]],9 ····['manager_2eh_7',·['manager.h',·['../manager_8h.xhtml',·1,·'']]],
10 ····['manyautocorrelation_2ecpp_8',·['manyautocorrelation.cpp',·['../tests_2manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)'],10 ····['manyautocorrelation_2ecpp_8',·['manyautocorrelation.cpp',·['../manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)'],
11 ········['../manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)']11 ········['../tests_2manyautocorrelation_8cpp.xhtml',·1,·'(Global·Namespace)']
12 ····]],12 ····]],
13 ····['manyautocorrelation_2eh_9',·['manyautocorrelation.h',·['../manyautocorrelation_8h.xhtml',·1,·'']]],13 ····['manyautocorrelation_2eh_9',·['manyautocorrelation.h',·['../manyautocorrelation_8h.xhtml',·1,·'']]],
14 ····['matio_2ecpp_10',·['matio.cpp',·['../tests_2matio_8cpp.xhtml',·1,·'']]],14 ····['matio_2ecpp_10',·['matio.cpp',·['../tests_2matio_8cpp.xhtml',·1,·'']]],
15 ····['matrix_2ecpp_11',·['matrix.cpp',·['../math_2tests_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)'],15 ····['matrix_2ecpp_11',·['matrix.cpp',·['../math_2tests_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)'],
16 ········['../math_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)']16 ········['../math_2matrix_8cpp.xhtml',·1,·'(Global·Namespace)']
17 ····]],17 ····]],
18 ····['matrix_2eh_12',·['matrix.h',·['../math_2include_2gromacs_2math_2matrix_8h.xhtml',·1,·'']]],18 ····['matrix_2eh_12',·['matrix.h',·['../math_2include_2gromacs_2math_2matrix_8h.xhtml',·1,·'']]],
Offset 36, 57 lines modifiedOffset 36, 57 lines modified
36 ····['mdspan_2eh_30',·['mdspan.h',·['../mdspan_8h.xhtml',·1,·'']]],36 ····['mdspan_2eh_30',·['mdspan.h',·['../mdspan_8h.xhtml',·1,·'']]],
37 ····['mempool_2ecpp_31',·['mempool.cpp',·['../mempool_8cpp.xhtml',·1,·'']]],37 ····['mempool_2ecpp_31',·['mempool.cpp',·['../mempool_8cpp.xhtml',·1,·'']]],
38 ····['mempool_2eh_32',·['mempool.h',·['../mempool_8h.xhtml',·1,·'']]],38 ····['mempool_2eh_32',·['mempool.h',·['../mempool_8h.xhtml',·1,·'']]],
39 ····['message_5fstring_5fcollector_2ecpp_33',·['message_string_collector.cpp',·['../tests_2message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)'],39 ····['message_5fstring_5fcollector_2ecpp_33',·['message_string_collector.cpp',·['../tests_2message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)'],
40 ········['../message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)']40 ········['../message__string__collector_8cpp.xhtml',·1,·'(Global·Namespace)']
41 ····]],41 ····]],
42 ····['message_5fstring_5fcollector_2eh_34',·['message_string_collector.h',·['../message__string__collector_8h.xhtml',·1,·'']]],42 ····['message_5fstring_5fcollector_2eh_34',·['message_string_collector.h',·['../message__string__collector_8h.xhtml',·1,·'']]],
43 ····['mimic_2ecpp_35',·['mimic.cpp',·['../gromacs_2mdrun_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)'],43 ····['mimic_2ecpp_35',·['mimic.cpp',·['../programs_2mdrun_2tests_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)'],
44 ········['../programs_2mdrun_2tests_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)']44 ········['../gromacs_2mdrun_2mimic_8cpp.xhtml',·1,·'(Global·Namespace)']
45 ····]],45 ····]],
46 ····['minimize_2ecpp_36',·['minimize.cpp',·['../gromacs_2mdrun_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)'],46 ····['minimize_2ecpp_36',·['minimize.cpp',·['../programs_2mdrun_2tests_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)'],
47 ········['../programs_2mdrun_2tests_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)']47 ········['../gromacs_2mdrun_2minimize_8cpp.xhtml',·1,·'(Global·Namespace)']
48 ····]],48 ····]],
49 ····['misc_2ecpp_37',·['misc.cpp',·['../misc_8cpp.xhtml',·1,·'']]],49 ····['misc_2ecpp_37',·['misc.cpp',·['../misc_8cpp.xhtml',·1,·'']]],
50 ····['mock_5fdatamodule_2ecpp_38',·['mock_datamodule.cpp',·['../mock__datamodule_8cpp.xhtml',·1,·'']]],50 ····['mock_5fdatamodule_2ecpp_38',·['mock_datamodule.cpp',·['../mock__datamodule_8cpp.xhtml',·1,·'']]],
51 ····['mock_5fdatamodule_2eh_39',·['mock_datamodule.h',·['../mock__datamodule_8h.xhtml',·1,·'']]],51 ····['mock_5fdatamodule_2eh_39',·['mock_datamodule.h',·['../mock__datamodule_8h.xhtml',·1,·'']]],
52 ····['mock_5fhelptopic_2ecpp_40',·['mock_helptopic.cpp',·['../mock__helptopic_8cpp.xhtml',·1,·'']]],52 ····['mock_5fhelptopic_2ecpp_40',·['mock_helptopic.cpp',·['../mock__helptopic_8cpp.xhtml',·1,·'']]],
53 ····['mock_5fhelptopic_2eh_41',·['mock_helptopic.h',·['../mock__helptopic_8h.xhtml',·1,·'']]],53 ····['mock_5fhelptopic_2eh_41',·['mock_helptopic.h',·['../mock__helptopic_8h.xhtml',·1,·'']]],
54 ····['mockhardwaretopology_2ecpp_42',·['mockhardwaretopology.cpp',·['../mockhardwaretopology_8cpp.xhtml',·1,·'']]],54 ····['mockhardwaretopology_2ecpp_42',·['mockhardwaretopology.cpp',·['../mockhardwaretopology_8cpp.xhtml',·1,·'']]],
55 ····['modularsimulator_2ecpp_43',·['modularsimulator.cpp',·['../modularsimulator_8cpp.xhtml',·1,·'']]],55 ····['modularsimulator_2ecpp_43',·['modularsimulator.cpp',·['../modularsimulator_8cpp.xhtml',·1,·'']]],
56 ····['modularsimulator_2eh_44',·['modularsimulator.h',·['../modularsimulator_8h.xhtml',·1,·'']]],56 ····['modularsimulator_2eh_44',·['modularsimulator.h',·['../modularsimulator_8h.xhtml',·1,·'']]],
57 ····['modularsimulatorinterfaces_2eh_45',·['modularsimulatorinterfaces.h',·['../modularsimulatorinterfaces_8h.xhtml',·1,·'']]],57 ····['modularsimulatorinterfaces_2eh_45',·['modularsimulatorinterfaces.h',·['../modularsimulatorinterfaces_8h.xhtml',·1,·'']]],
58 ····['modules_2ecpp_46',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]],58 ····['modules_2ecpp_46',·['modules.cpp',·['../modules_8cpp.xhtml',·1,·'']]],
59 ····['modules_2eh_47',·['modules.h',·['../modules_8h.xhtml',·1,·'']]],59 ····['modules_2eh_47',·['modules.h',·['../modules_8h.xhtml',·1,·'']]],
60 ····['moduletest_2ecpp_48',·['moduletest.cpp',·['../gromacs_2trajectoryanalysis_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'],60 ····['moduletest_2ecpp_48',·['moduletest.cpp',·['../programs_2mdrun_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)'],
61 ········['../programs_2mdrun_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)']61 ········['../gromacs_2trajectoryanalysis_2tests_2moduletest_8cpp.xhtml',·1,·'(Global·Namespace)']
62 ····]],62 ····]],
63 ····['moduletest_2eh_49',·['moduletest.h',·['../gromacs_2trajectoryanalysis_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'],63 ····['moduletest_2eh_49',·['moduletest.h',·['../gromacs_2trajectoryanalysis_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)'],
64 ········['../programs_2mdrun_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)']64 ········['../programs_2mdrun_2tests_2moduletest_8h.xhtml',·1,·'(Global·Namespace)']
65 ····]],65 ····]],
66 ····['mp11_2eh_50',·['mp11.h',·['../mp11_8h.xhtml',·1,·'']]],66 ····['mp11_2eh_50',·['mp11.h',·['../mp11_8h.xhtml',·1,·'']]],
67 ····['mpi_5fprinter_2eh_51',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]],67 ····['mpi_5fprinter_2eh_51',·['mpi_printer.h',·['../mpi__printer_8h.xhtml',·1,·'']]],
68 ····['mpitest_2ecpp_52',·['mpitest.cpp',·['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'],68 ····['mpitest_2ecpp_52',·['mpitest.cpp',·['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)'],
69 ········['../tests_2mpitest_8cpp.xhtml',·1,·'(Global·Namespace)']69 ········['../mpitest_8cpp.xhtml',·1,·'(Global·Namespace)']
70 ····]],70 ····]],
71 ····['mpitest_2eh_53',·['mpitest.h',·['../mpitest_8h.xhtml',·1,·'']]],71 ····['mpitest_2eh_53',·['mpitest.h',·['../mpitest_8h.xhtml',·1,·'']]],
72 ····['mrcdensitymap_2ecpp_54',·['mrcdensitymap.cpp',·['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'],72 ····['mrcdensitymap_2ecpp_54',·['mrcdensitymap.cpp',·['../tests_2mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)'],
73 ········['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']73 ········['../mrcdensitymap_8cpp.xhtml',·1,·'(Global·Namespace)']
74 ····]],74 ····]],
75 ····['mrcdensitymap_2eh_55',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],75 ····['mrcdensitymap_2eh_55',·['mrcdensitymap.h',·['../mrcdensitymap_8h.xhtml',·1,·'']]],
76 ····['mrcdensitymapheader_2ecpp_56',·['mrcdensitymapheader.cpp',·['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],76 ····['mrcdensitymapheader_2ecpp_56',·['mrcdensitymapheader.cpp',·['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)'],
77 ········['../tests_2mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']77 ········['../mrcdensitymapheader_8cpp.xhtml',·1,·'(Global·Namespace)']
78 ····]],78 ····]],
79 ····['mrcdensitymapheader_2eh_57',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],79 ····['mrcdensitymapheader_2eh_57',·['mrcdensitymapheader.h',·['../mrcdensitymapheader_8h.xhtml',·1,·'']]],
80 ····['mrcserializer_2ecpp_58',·['mrcserializer.cpp',·['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],80 ····['mrcserializer_2ecpp_58',·['mrcserializer.cpp',·['../mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)'],
81 ········['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']81 ········['../tests_2mrcserializer_8cpp.xhtml',·1,·'(Global·Namespace)']
82 ····]],82 ····]],
83 ····['mrcserializer_2eh_59',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],83 ····['mrcserializer_2eh_59',·['mrcserializer.h',·['../mrcserializer_8h.xhtml',·1,·'']]],
84 ····['msd_2ecpp_60',·['msd.cpp',·['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'],84 ····['msd_2ecpp_60',·['msd.cpp',·['../tests_2msd_8cpp.xhtml',·1,·'(Global·Namespace)'],
85 ········['../tests_2msd_8cpp.xhtml',·1,·'(Global·Namespace)']85 ········['../modules_2msd_8cpp.xhtml',·1,·'(Global·Namespace)']
86 ····]],86 ····]],
87 ····['msd_2eh_61',·['msd.h',·['../msd_8h.xhtml',·1,·'']]],87 ····['msd_2eh_61',·['msd.h',·['../msd_8h.xhtml',·1,·'']]],
88 ····['mshift_2ecpp_62',·['mshift.cpp',·['../tests_2mshift_8cpp.xhtml',·1,·'']]],88 ····['mshift_2ecpp_62',·['mshift.cpp',·['../tests_2mshift_8cpp.xhtml',·1,·'']]],
89 ····['mtop_2ecpp_63',·['mtop.cpp',·['../mtop_8cpp.xhtml',·1,·'']]],89 ····['mtop_2ecpp_63',·['mtop.cpp',·['../mtop_8cpp.xhtml',·1,·'']]],
90 ····['mtop_5fatomloops_2eh_64',·['mtop_atomloops.h',·['../mtop__atomloops_8h.xhtml',·1,·'']]],90 ····['mtop_5fatomloops_2eh_64',·['mtop_atomloops.h',·['../mtop__atomloops_8h.xhtml',·1,·'']]],
91 ····['mtop_5flookup_2eh_65',·['mtop_lookup.h',·['../mtop__lookup_8h.xhtml',·1,·'']]],91 ····['mtop_5flookup_2eh_65',·['mtop_lookup.h',·['../mtop__lookup_8h.xhtml',·1,·'']]],
92 ····['mttk_2ecpp_66',·['mttk.cpp',·['../mttk_8cpp.xhtml',·1,·'']]],92 ····['mttk_2ecpp_66',·['mttk.cpp',·['../mttk_8cpp.xhtml',·1,·'']]],
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Offset 59, 26 lines modifiedOffset 59, 26 lines modified
59 ····['nbsearch_2eh_55',·['nbsearch.h',·['../nbsearch_8h.xhtml',·1,·'']]],59 ····['nbsearch_2eh_55',·['nbsearch.h',·['../nbsearch_8h.xhtml',·1,·'']]],
60 ····['neldermead_2ecpp_56',·['neldermead.cpp',·['../neldermead_8cpp.xhtml',·1,·'(Global·Namespace)'],60 ····['neldermead_2ecpp_56',·['neldermead.cpp',·['../neldermead_8cpp.xhtml',·1,·'(Global·Namespace)'],
61 ········['../tests_2neldermead_8cpp.xhtml',·1,·'(Global·Namespace)']61 ········['../tests_2neldermead_8cpp.xhtml',·1,·'(Global·Namespace)']
62 ····]],62 ····]],
63 ····['neldermead_2eh_57',·['neldermead.h',·['../neldermead_8h.xhtml',·1,·'']]],63 ····['neldermead_2eh_57',·['neldermead.h',·['../neldermead_8h.xhtml',·1,·'']]],
64 ····['niceheader_2ecpp_58',·['niceheader.cpp',·['../niceheader_8cpp.xhtml',·1,·'']]],64 ····['niceheader_2ecpp_58',·['niceheader.cpp',·['../niceheader_8cpp.xhtml',·1,·'']]],
65 ····['niceheader_2eh_59',·['niceheader.h',·['../niceheader_8h.xhtml',·1,·'']]],65 ····['niceheader_2eh_59',·['niceheader.h',·['../niceheader_8h.xhtml',·1,·'']]],
66 ····['nnpot_2ecpp_60',·['nnpot.cpp',·['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],66 ····['nnpot_2ecpp_60',·['nnpot.cpp',·['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)'],
67 ········['../nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']67 ········['../tests_2nnpot_8cpp.xhtml',·1,·'(Global·Namespace)']
68 ····]],68 ····]],
69 ····['nnpot_2eh_61',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],69 ····['nnpot_2eh_61',·['nnpot.h',·['../nnpot_8h.xhtml',·1,·'']]],
70 ····['nnpotforceprovider_2ecpp_62',·['nnpotforceprovider.cpp',·['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],70 ····['nnpotforceprovider_2ecpp_62',·['nnpotforceprovider.cpp',·['../nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
71 ········['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']71 ········['../tests_2nnpotforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
72 ····]],72 ····]],
73 ····['nnpotforceprovider_2eh_63',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],73 ····['nnpotforceprovider_2eh_63',·['nnpotforceprovider.h',·['../nnpotforceprovider_8h.xhtml',·1,·'']]],
74 ····['nnpotforceprovider_5fstub_2ecpp_64',·['nnpotforceprovider_stub.cpp',·['../nnpotforceprovider__stub_8cpp.xhtml',·1,·'']]],74 ····['nnpotforceprovider_5fstub_2ecpp_64',·['nnpotforceprovider_stub.cpp',·['../nnpotforceprovider__stub_8cpp.xhtml',·1,·'']]],
75 ····['nnpotmodel_2eh_65',·['nnpotmodel.h',·['../nnpotmodel_8h.xhtml',·1,·'']]],75 ····['nnpotmodel_2eh_65',·['nnpotmodel.h',·['../nnpotmodel_8h.xhtml',·1,·'']]],
76 ····['nnpotoptions_2ecpp_66',·['nnpotoptions.cpp',·['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],76 ····['nnpotoptions_2ecpp_66',·['nnpotoptions.cpp',·['../nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)'],
77 ········['../nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']77 ········['../tests_2nnpotoptions_8cpp.xhtml',·1,·'(Global·Namespace)']
78 ····]],78 ····]],
79 ····['nnpotoptions_2eh_67',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],79 ····['nnpotoptions_2eh_67',·['nnpotoptions.h',·['../nnpotoptions_8h.xhtml',·1,·'']]],
80 ····['nnpottopologypreprocessor_2ecpp_68',·['nnpottopologypreprocessor.cpp',·['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],80 ····['nnpottopologypreprocessor_2ecpp_68',·['nnpottopologypreprocessor.cpp',·['../tests_2nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)'],
81 ········['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']81 ········['../nnpottopologypreprocessor_8cpp.xhtml',·1,·'(Global·Namespace)']
82 ····]],82 ····]],
83 ····['nnpottopologypreprocessor_2eh_69',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],83 ····['nnpottopologypreprocessor_2eh_69',·['nnpottopologypreprocessor.h',·['../nnpottopologypreprocessor_8h.xhtml',·1,·'']]],
84 ····['nodelete_2eh_70',·['nodelete.h',·['../nodelete_8h.xhtml',·1,·'']]],84 ····['nodelete_2eh_70',·['nodelete.h',·['../nodelete_8h.xhtml',·1,·'']]],
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Offset 14, 16 lines modifiedOffset 14, 16 lines modified
14 ····['pairlistparams_2ecpp_10',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]],14 ····['pairlistparams_2ecpp_10',·['pairlistparams.cpp',·['../pairlistparams_8cpp.xhtml',·1,·'']]],
15 ····['pairlistparams_2eh_11',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],15 ····['pairlistparams_2eh_11',·['pairlistparams.h',·['../pairlistparams_8h.xhtml',·1,·'']]],
16 ····['pairlistset_2ecpp_12',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],16 ····['pairlistset_2ecpp_12',·['pairlistset.cpp',·['../pairlistset_8cpp.xhtml',·1,·'']]],
17 ····['pairlistset_2eh_13',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],17 ····['pairlistset_2eh_13',·['pairlistset.h',·['../pairlistset_8h.xhtml',·1,·'']]],
18 ····['pairlistsets_2eh_14',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],18 ····['pairlistsets_2eh_14',·['pairlistsets.h',·['../pairlistsets_8h.xhtml',·1,·'']]],
19 ····['pairlistwork_2ecpp_15',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],19 ····['pairlistwork_2ecpp_15',·['pairlistwork.cpp',·['../pairlistwork_8cpp.xhtml',·1,·'']]],
20 ····['pairlistwork_2eh_16',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],20 ····['pairlistwork_2eh_16',·['pairlistwork.h',·['../pairlistwork_8h.xhtml',·1,·'']]],
21 ····['pairs_2ecpp_17',·['pairs.cpp',·['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],21 ····['pairs_2ecpp_17',·['pairs.cpp',·['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)'],
22 ········['../tests_2pairs_8cpp.xhtml',·1,·'(Global·Namespace)']22 ········['../pairs_8cpp.xhtml',·1,·'(Global·Namespace)']
23 ····]],23 ····]],
24 ····['pairs_2eh_18',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],24 ····['pairs_2eh_18',·['pairs.h',·['../pairs_8h.xhtml',·1,·'']]],
25 ····['pairsearch_2ecpp_19',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],25 ····['pairsearch_2ecpp_19',·['pairsearch.cpp',·['../pairsearch_8cpp.xhtml',·1,·'']]],
26 ····['pairsearch_2eh_20',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],26 ····['pairsearch_2eh_20',·['pairsearch.h',·['../pairsearch_8h.xhtml',·1,·'']]],
27 ····['paralleloptions_2eh_21',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],27 ····['paralleloptions_2eh_21',·['paralleloptions.h',·['../paralleloptions_8h.xhtml',·1,·'']]],
28 ····['params_2ecpp_22',·['params.cpp',·['../params_8cpp.xhtml',·1,·'']]],28 ····['params_2ecpp_22',·['params.cpp',·['../params_8cpp.xhtml',·1,·'']]],
29 ····['pargs_2ecpp_23',·['pargs.cpp',·['../tests_2pargs_8cpp.xhtml',·1,·'']]],29 ····['pargs_2ecpp_23',·['pargs.cpp',·['../tests_2pargs_8cpp.xhtml',·1,·'']]],
Offset 42, 16 lines modifiedOffset 42, 16 lines modified
42 ····['pbc_2ecpp_34',·['pbc.cpp',·['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],42 ····['pbc_2ecpp_34',·['pbc.cpp',·['../pbc_8cpp.xhtml',·1,·'(Global·Namespace)'],
43 ········['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)']43 ········['../tests_2pbc_8cpp.xhtml',·1,·'(Global·Namespace)']
44 ····]],44 ····]],
45 ····['pbc_5faiuc_2eh_35',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],45 ····['pbc_5faiuc_2eh_35',·['pbc_aiuc.h',·['../pbc__aiuc_8h.xhtml',·1,·'']]],
46 ····['pbc_5faiuc_5fsycl_2eh_36',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],46 ····['pbc_5faiuc_5fsycl_2eh_36',·['pbc_aiuc_sycl.h',·['../pbc__aiuc__sycl_8h.xhtml',·1,·'']]],
47 ····['pbc_5fsimd_2ecpp_37',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]],47 ····['pbc_5fsimd_2ecpp_37',·['pbc_simd.cpp',·['../pbc__simd_8cpp.xhtml',·1,·'']]],
48 ····['pbc_5fsimd_2eh_38',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]],48 ····['pbc_5fsimd_2eh_38',·['pbc_simd.h',·['../pbc__simd_8h.xhtml',·1,·'']]],
49 ····['pbcenums_2ecpp_39',·['pbcenums.cpp',·['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'],49 ····['pbcenums_2ecpp_39',·['pbcenums.cpp',·['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)'],
50 ········['../tests_2pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)']50 ········['../pbcenums_8cpp.xhtml',·1,·'(Global·Namespace)']
51 ····]],51 ····]],
52 ····['pbcenums_2eh_40',·['pbcenums.h',·['../pbcenums_8h.xhtml',·1,·'']]],52 ····['pbcenums_2eh_40',·['pbcenums.h',·['../pbcenums_8h.xhtml',·1,·'']]],
53 ····['pdb2gmx_2ecpp_41',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]],53 ····['pdb2gmx_2ecpp_41',·['pdb2gmx.cpp',·['../tests_2pdb2gmx_8cpp.xhtml',·1,·'']]],
54 ····['periodicactions_2ecpp_42',·['periodicactions.cpp',·['../periodicactions_8cpp.xhtml',·1,·'']]],54 ····['periodicactions_2ecpp_42',·['periodicactions.cpp',·['../periodicactions_8cpp.xhtml',·1,·'']]],
55 ····['periodicactions_2eh_43',·['periodicactions.h',·['../periodicactions_8h.xhtml',·1,·'']]],55 ····['periodicactions_2eh_43',·['periodicactions.h',·['../periodicactions_8h.xhtml',·1,·'']]],
56 ····['periodicactions_5fbasic_2ecpp_44',·['periodicactions_basic.cpp',·['../periodicactions__basic_8cpp.xhtml',·1,·'']]],56 ····['periodicactions_5fbasic_2ecpp_44',·['periodicactions_basic.cpp',·['../periodicactions__basic_8cpp.xhtml',·1,·'']]],
57 ····['periodicactions_5fconstraints_2ecpp_45',·['periodicactions_constraints.cpp',·['../periodicactions__constraints_8cpp.xhtml',·1,·'']]],57 ····['periodicactions_5fconstraints_2ecpp_45',·['periodicactions_constraints.cpp',·['../periodicactions__constraints_8cpp.xhtml',·1,·'']]],
Offset 153, 16 lines modifiedOffset 153, 16 lines modified
153 ····['polynomials_2eh_137',·['polynomials.h',·['../polynomials_8h.xhtml',·1,·'']]],153 ····['polynomials_2eh_137',·['polynomials.h',·['../polynomials_8h.xhtml',·1,·'']]],
154 ····['poscalc_2ecpp_138',·['poscalc.cpp',·['../tests_2poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'],154 ····['poscalc_2ecpp_138',·['poscalc.cpp',·['../tests_2poscalc_8cpp.xhtml',·1,·'(Global·Namespace)'],
155 ········['../poscalc_8cpp.xhtml',·1,·'(Global·Namespace)']155 ········['../poscalc_8cpp.xhtml',·1,·'(Global·Namespace)']
156 ····]],156 ····]],
157 ····['poscalc_2eh_139',·['poscalc.h',·['../poscalc_8h.xhtml',·1,·'']]],157 ····['poscalc_2eh_139',·['poscalc.h',·['../poscalc_8h.xhtml',·1,·'']]],
158 ····['position_2ecpp_140',·['position.cpp',·['../position_8cpp.xhtml',·1,·'']]],158 ····['position_2ecpp_140',·['position.cpp',·['../position_8cpp.xhtml',·1,·'']]],
159 ····['position_2eh_141',·['position.h',·['../position_8h.xhtml',·1,·'']]],159 ····['position_2eh_141',·['position.h',·['../position_8h.xhtml',·1,·'']]],
160 ····['position_5frestraints_2ecpp_142',·['position_restraints.cpp',·['../position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)'],160 ····['position_5frestraints_2ecpp_142',·['position_restraints.cpp',·['../tests_2position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)'],
161 ········['../tests_2position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)']161 ········['../position__restraints_8cpp.xhtml',·1,·'(Global·Namespace)']
162 ····]],162 ····]],
163 ····['position_5frestraints_2eh_143',·['position_restraints.h',·['../position__restraints_8h.xhtml',·1,·'']]],163 ····['position_5frestraints_2eh_143',·['position_restraints.h',·['../position__restraints_8h.xhtml',·1,·'']]],
164 ····['printtime_2eh_144',·['printtime.h',·['../printtime_8h.xhtml',·1,·'']]],164 ····['printtime_2eh_144',·['printtime.h',·['../printtime_8h.xhtml',·1,·'']]],
165 ····['programcontext_2ecpp_145',·['programcontext.cpp',·['../programcontext_8cpp.xhtml',·1,·'']]],165 ····['programcontext_2ecpp_145',·['programcontext.cpp',·['../programcontext_8cpp.xhtml',·1,·'']]],
166 ····['programcontext_2eh_146',·['programcontext.h',·['../programcontext_8h.xhtml',·1,·'']]],166 ····['programcontext_2eh_146',·['programcontext.h',·['../programcontext_8h.xhtml',·1,·'']]],
167 ····['propagator_2ecpp_147',·['propagator.cpp',·['../propagator_8cpp.xhtml',·1,·'']]],167 ····['propagator_2ecpp_147',·['propagator.cpp',·['../propagator_8cpp.xhtml',·1,·'']]],
168 ····['propagator_2eh_148',·['propagator.h',·['../propagator_8h.xhtml',·1,·'']]],168 ····['propagator_2eh_148',·['propagator.h',·['../propagator_8h.xhtml',·1,·'']]],
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3 ········['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)']3 ········['../qmmm_8cpp.xhtml',·1,·'(Global·Namespace)']
4 ····]],4 ····]],
5 ····['qmmm_2eh_1',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]],5 ····['qmmm_2eh_1',·['qmmm.h',·['../qmmm_8h.xhtml',·1,·'']]],
6 ····['qmmmforceprovider_2ecpp_2',·['qmmmforceprovider.cpp',·['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],6 ····['qmmmforceprovider_2ecpp_2',·['qmmmforceprovider.cpp',·['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)'],
7 ········['../qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']7 ········['../tests_2qmmmforceprovider_8cpp.xhtml',·1,·'(Global·Namespace)']
8 ····]],8 ····]],
9 ····['qmmmforceprovider_2eh_3',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],9 ····['qmmmforceprovider_2eh_3',·['qmmmforceprovider.h',·['../qmmmforceprovider_8h.xhtml',·1,·'']]],
10 ····['qmmmforceprovider_5fstub_2ecpp_4',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],10 ····['qmmmforceprovider_5fstub_2ecpp_4',·['qmmmforceprovider_stub.cpp',·['../qmmmforceprovider__stub_8cpp.xhtml',·1,·'']]],
11 ····['qmmminputgenerator_2ecpp_5',·['qmmminputgenerator.cpp',·['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],11 ····['qmmminputgenerator_2ecpp_5',·['qmmminputgenerator.cpp',·['../qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)'],
12 ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']12 ········['../tests_2qmmminputgenerator_8cpp.xhtml',·1,·'(Global·Namespace)']
13 ····]],13 ····]],
14 ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],14 ····['qmmminputgenerator_2eh_6',·['qmmminputgenerator.h',·['../qmmminputgenerator_8h.xhtml',·1,·'']]],
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158 <dd><a·class="anchor"·id="_todo000227"></a>Extend·the·coverage·to·the·appending·case.·</dd>158 <dd><a·class="anchor"·id="_todo000227"></a>Extend·the·coverage·to·the·appending·case.·</dd>
159 <dt>File·<a·class="el"·href="tests_2expanded_8cpp.xhtml">expanded.cpp</a>··</dt>159 <dt>File·<a·class="el"·href="tests_2expanded_8cpp.xhtml">expanded.cpp</a>··</dt>
160 <dd><a·class="anchor"·id="_todo000101"></a>Add·more·tests·as·the·expanded·ensemble·implementation·gets·more·modular·(#3848).·</dd>160 <dd><a·class="anchor"·id="_todo000101"></a>Add·more·tests·as·the·expanded·ensemble·implementation·gets·more·modular·(#3848).·</dd>
161 <dt>File·<a·class="el"·href="expandedensemble_8cpp.xhtml">expandedensemble.cpp</a>··</dt>161 <dt>File·<a·class="el"·href="expandedensemble_8cpp.xhtml">expandedensemble.cpp</a>··</dt>
162 <dd><a·class="anchor"·id="_todo000232"></a>Extend·the·coverage·to·the·appending·case.·</dd>162 <dd><a·class="anchor"·id="_todo000232"></a>Extend·the·coverage·to·the·appending·case.·</dd>
163 <dt>Member·<a·class="el"·href="device__management_8cpp.xhtml#a0579937ac9ed3975d887a3d976d94899">findDevices</a>··()</dt>163 <dt>Member·<a·class="el"·href="device__management_8cpp.xhtml#a0579937ac9ed3975d887a3d976d94899">findDevices</a>··()</dt>
164 <dd><a·class="anchor"·id="_todo000061"></a>:·Check·if·errors·do·propagate·in·OpenCL·as·they·do·in·CUDA·and·whether·there·is·a·mechanism·to·"clear"·them.·</dd>164 <dd><a·class="anchor"·id="_todo000061"></a>:·Check·if·errors·do·propagate·in·OpenCL·as·they·do·in·CUDA·and·whether·there·is·a·mechanism·to·"clear"·them.·</dd>
165 <dt>Member·<a·class="el"·href="expfit_8h.xhtml#a560ea7d97277b9e0576776ec695fb9b3">fit_acf</a>··(int·ncorr,·int·fitfn,·const·gmx_output_env_t·*oenv,·gmx_bool·bVerbose,·real·tbeginfit,·real·tendfit,·real·dt,·real·c1[],·real·*fit)</dt>165 <dt>Member·<a·class="el"·href="expfit_8cpp.xhtml#a560ea7d97277b9e0576776ec695fb9b3">fit_acf</a>··(int·ncorr,·int·fitfn,·const·gmx_output_env_t·*oenv,·gmx_bool·bVerbose,·real·tbeginfit,·real·tendfit,·real·dt,·real·c1[],·real·*fit)</dt>
166 <dd><a·class="anchor"·id="_todo000015"></a>check·parameters··</dd>166 <dd><a·class="anchor"·id="_todo000015"></a>check·parameters··</dd>
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168 <dd><a·class="anchor"·id="_todo000075"></a>This·function·could·go·away·when·idef·is·not·a·big·bucket·of·everything.··</dd>168 <dd><a·class="anchor"·id="_todo000075"></a>This·function·could·go·away·when·idef·is·not·a·big·bucket·of·everything.··</dd>
169 <dt>Member·<a·class="el"·href="src_2gromacs_2listed__forces_2utilities_8h.xhtml#aba08e75fc4e249fb9ee806cf08781ff5">ftypeIsListedPotential</a>··(int·ftype)</dt>169 <dt>Member·<a·class="el"·href="src_2gromacs_2listed__forces_2utilities_8h.xhtml#aba08e75fc4e249fb9ee806cf08781ff5">ftypeIsListedPotential</a>··(int·ftype)</dt>
170 <dd><a·class="anchor"·id="_todo000074"></a>This·function·could·go·away·when·idef·is·not·a·big·bucket·of·everything.··</dd>170 <dd><a·class="anchor"·id="_todo000074"></a>This·function·could·go·away·when·idef·is·not·a·big·bucket·of·everything.··</dd>
171 <dt>Member·<a·class="el"·href="device__management__common_8cpp.xhtml#a4c6f328aacc0b724c1b5731fed2744eb">getDeviceComputeUnitFactor</a>··(const·<a·class="el"·href="structDeviceInformation.xhtml"·title="Platform-dependent·device·information.">DeviceInformation</a>·&amp;deviceInfo)</dt>171 <dt>Member·<a·class="el"·href="device__management__common_8cpp.xhtml#a4c6f328aacc0b724c1b5731fed2744eb">getDeviceComputeUnitFactor</a>··(const·<a·class="el"·href="structDeviceInformation.xhtml"·title="Platform-dependent·device·information.">DeviceInformation</a>·&amp;deviceInfo)</dt>
172 <dd><a·class="anchor"·id="_todo000060"></a>:·Handled·AMD·RDNA?·</dd>172 <dd><a·class="anchor"·id="_todo000060"></a>:·Handled·AMD·RDNA?·</dd>
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Offset 595, 22 lines modifiedOffset 595, 22 lines modified
595 ····['simd_20intrinsics_20interface_20simd_392',·['SIMD·intrinsics·interface·(simd)',·['../group__module__simd.xhtml',·1,·'']]],595 ····['simd_20intrinsics_20interface_20simd_392',·['SIMD·intrinsics·interface·(simd)',·['../group__module__simd.xhtml',·1,·'']]],
596 ····['simd_20math_20library_393',·['The·SIMD·math·library',·['../page_simd.xhtml#autotoc_md70',·1,·'']]],596 ····['simd_20math_20library_393',·['The·SIMD·math·library',·['../page_simd.xhtml#autotoc_md70',·1,·'']]],
597 ····['simd_20module_394',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]],597 ····['simd_20module_394',·['Design·of·the·GROMACS·SIMD·module',·['../page_simd.xhtml#autotoc_md57',·1,·'']]],
598 ····['simd_20preprocessor_20macros_395',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]],598 ····['simd_20preprocessor_20macros_395',·['Predefined·SIMD·preprocessor·macros',·['../page_simd.xhtml#autotoc_md66',·1,·'']]],
599 ····['simd_2eh_396',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]],599 ····['simd_2eh_396',·['simd.h',·['../include_2gromacs_2simd_2simd_8h.xhtml',·1,·'']]],
600 ····['simd4_20implementation_397',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]],600 ····['simd4_20implementation_397',·['SIMD4·implementation',·['../page_simd.xhtml#autotoc_md64',·1,·'']]],
601 ····['simd4bool_398',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]],601 ····['simd4bool_398',·['Simd4Bool',·['../namespacegmx.xhtml#acb6a84be080be397c2c09cda9f315037',·1,·'gmx']]],
 602 ····['simd4dbool_399',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool'],
602 ····['simd4dbool_399',·['simd4dbool',·['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()'],603 ········['../classgmx_1_1Simd4DBool.xhtml#a428de6b27a42a06dd0fd632660b3ae9d',·1,·'gmx::Simd4DBool::Simd4DBool()']
603 ········['../classgmx_1_1Simd4DBool.xhtml',·1,·'gmx::Simd4DBool'] 
604 ····]],604 ····]],
 605 ····['simd4double_400',·['simd4double',·['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double'],
605 ····['simd4double_400',·['simd4double',·['../classgmx_1_1Simd4Double.xhtml#a92931f93554548894cd5daa60af49525',·1,·'gmx::Simd4Double::Simd4Double()'],606 ········['../classgmx_1_1Simd4Double.xhtml#a92931f93554548894cd5daa60af49525',·1,·'gmx::Simd4Double::Simd4Double()']
606 ········['../classgmx_1_1Simd4Double.xhtml',·1,·'gmx::Simd4Double'] 
607 ····]],607 ····]],
 608 ····['simd4fbool_401',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool'],
608 ····['simd4fbool_401',·['simd4fbool',·['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()'],609 ········['../classgmx_1_1Simd4FBool.xhtml#ad64754cbb774d9cab1ed08c49a6e28bc',·1,·'gmx::Simd4FBool::Simd4FBool()']
609 ········['../classgmx_1_1Simd4FBool.xhtml',·1,·'gmx::Simd4FBool'] 
610 ····]],610 ····]],
611 ····['simd4float_402',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'],611 ····['simd4float_402',·['simd4float',·['../classgmx_1_1Simd4Float.xhtml#a4d61d22b9955c0f6fa78804562704cbe',·1,·'gmx::Simd4Float::Simd4Float()'],
612 ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float']612 ········['../classgmx_1_1Simd4Float.xhtml',·1,·'gmx::Simd4Float']
613 ····]],613 ····]],
614 ····['simd4n_20implementation_403',·['SIMD4N·implementation',·['../page_simd.xhtml#autotoc_md65',·1,·'']]],614 ····['simd4n_20implementation_403',·['SIMD4N·implementation',·['../page_simd.xhtml#autotoc_md65',·1,·'']]],
615 ····['simd4real_404',·['Simd4Real',·['../namespacegmx.xhtml#a37686b0c2ec48a361d6c4473c1fdb70c',·1,·'gmx']]],615 ····['simd4real_404',·['Simd4Real',·['../namespacegmx.xhtml#a37686b0c2ec48a361d6c4473c1fdb70c',·1,·'gmx']]],
616 ····['simd4setzerod_405',·['simd4SetZeroD',·['../group__module__simd.xhtml#gac88aa19e4c856c2333bf814c3521c488',·1,·'gmx']]],616 ····['simd4setzerod_405',·['simd4SetZeroD',·['../group__module__simd.xhtml#gac88aa19e4c856c2333bf814c3521c488',·1,·'gmx']]],
Offset 618, 16 lines modifiedOffset 618, 16 lines modified
618 ····['simd_5fmath_2eh_407',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]],618 ····['simd_5fmath_2eh_407',·['simd_math.h',·['../simd__math_8h.xhtml',·1,·'']]],
619 ····['simd_5fmemory_2eh_408',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]],619 ····['simd_5fmemory_2eh_408',·['simd_memory.h',·['../simd__memory_8h.xhtml',·1,·'']]],
620 ····['simd_5fsupport_2eh_409',·['simd_support.h',·['../simd__support_8h.xhtml',·1,·'']]],620 ····['simd_5fsupport_2eh_409',·['simd_support.h',·['../simd__support_8h.xhtml',·1,·'']]],
621 ····['simd_5fwidth_410',·['simd_width',·['../namespacegmx.xhtml#ad2defc5df98b53733b2d299c76788b05',·1,·'gmx']]],621 ····['simd_5fwidth_410',·['simd_width',·['../namespacegmx.xhtml#ad2defc5df98b53733b2d299c76788b05',·1,·'gmx']]],
622 ····['simdbitmask_411',·['SimdBitMask',·['../namespacegmx.xhtml#afb42c13ecb6e9bac5d3b89e89143257f',·1,·'gmx']]],622 ····['simdbitmask_411',·['SimdBitMask',·['../namespacegmx.xhtml#afb42c13ecb6e9bac5d3b89e89143257f',·1,·'gmx']]],
623 ····['simdbool_412',·['SimdBool',·['../namespacegmx.xhtml#a307172d59a1a7c9ed87bc2cb4df83efa',·1,·'gmx']]],623 ····['simdbool_412',·['SimdBool',·['../namespacegmx.xhtml#a307172d59a1a7c9ed87bc2cb4df83efa',·1,·'gmx']]],
624 ····['simdcheck_413',·['simdCheck',·['../namespacegmx.xhtml#a3dfaae36144016a6b9ef7524dfbbb815',·1,·'gmx']]],624 ····['simdcheck_413',·['simdCheck',·['../namespacegmx.xhtml#a3dfaae36144016a6b9ef7524dfbbb815',·1,·'gmx']]],
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625 ····['simddbool_414',·['simddbool',·['../classgmx_1_1SimdDBool.xhtml#ad4d8f87a8e48ad39d6600c271dc37a02',·1,·'gmx::SimdDBool::SimdDBool()'],626 ········['../classgmx_1_1SimdDBool.xhtml#ad4d8f87a8e48ad39d6600c271dc37a02',·1,·'gmx::SimdDBool::SimdDBool()']
626 ········['../classgmx_1_1SimdDBool.xhtml',·1,·'gmx::SimdDBool'] 
627 ····]],627 ····]],
628 ····['simddibool_415',·['simddibool',·['../classgmx_1_1SimdDIBool.xhtml',·1,·'gmx::SimdDIBool'],628 ····['simddibool_415',·['simddibool',·['../classgmx_1_1SimdDIBool.xhtml',·1,·'gmx::SimdDIBool'],
629 ········['../classgmx_1_1SimdDIBool.xhtml#a9b76cf7d82509f3f7adeac5d7f1b1477',·1,·'gmx::SimdDIBool::SimdDIBool()']629 ········['../classgmx_1_1SimdDIBool.xhtml#a9b76cf7d82509f3f7adeac5d7f1b1477',·1,·'gmx::SimdDIBool::SimdDIBool()']
630 ····]],630 ····]],
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632 ········['../classgmx_1_1SimdDInt32.xhtml#a4107f8bf681a5cfe0abd34bffd5d952b',·1,·'gmx::SimdDInt32::SimdDInt32()']632 ········['../classgmx_1_1SimdDInt32.xhtml#a4107f8bf681a5cfe0abd34bffd5d952b',·1,·'gmx::SimdDInt32::SimdDInt32()']
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23 ····['unit_15',·['unit',·['../classgmx_1_1EnergyTerm.xhtml#aef5ad0000c2fbbc74c57f0b5e0ddb409',·1,·'gmx::EnergyTerm']]],23 ····['unit_15',·['unit',·['../classgmx_1_1EnergyTerm.xhtml#aef5ad0000c2fbbc74c57f0b5e0ddb409',·1,·'gmx::EnergyTerm']]],
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27 ····['unitcelltype_19',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],27 ····['unitcelltype_19',·['UnitCellType',·['../namespacegmx.xhtml#af897bff42be729e6eaf3c4dc6e199722',·1,·'gmx']]],
28 ····['unitcelltypenames_20',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],28 ····['unitcelltypenames_20',·['unitCellTypeNames',·['../namespacegmx.xhtml#ae81efb97e81499b750d906d26a29ce18',·1,·'gmx']]],
29 ····['unitvector_21',·['unitvector',·['../namespacegmx.xhtml#a53215047e2f488dfbf48164090c07b40',·1,·'gmx::unitVector()'], 
30 ········['../classgmx_1_1BasicVector.xhtml#a2fc805de143df5ecfe38f2cb50d84e6c',·1,·'gmx::BasicVector::unitVector()']29 ····['unitvector_21',·['unitvector',·['../classgmx_1_1BasicVector.xhtml#a2fc805de143df5ecfe38f2cb50d84e6c',·1,·'gmx::BasicVector::unitVector()'],
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37 ····['unpackrecvbufkernel_24',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],37 ····['unpackrecvbufkernel_24',·['unpackRecvBufKernel',·['../namespacegmx.xhtml#a704128fa72f8ce7dcf08d0063a166036',·1,·'gmx']]],
38 ····['unpaddedarrayref_25',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],38 ····['unpaddedarrayref_25',·['unpaddedArrayRef',·['../classgmx_1_1ArrayRefWithPadding.xhtml#ad5b878ca7749f5b8f52e006269fbfc2f',·1,·'gmx::ArrayRefWithPadding']]],
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41 ····['unsignedchartostring_28',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]],41 ····['unsignedchartostring_28',·['unsignedCharToString',·['../group__module__utility.xhtml#ga78b462191d8dbe81225e12d64cdd55a3',·1,·'gmx']]],
42 ····['update_29',·['update',·['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'],42 ····['update_29',·['update',·['../classgmx_1_1IRestraintPotential.xhtml#a6bc44212f005dbc7a03acf9a76b1074d',·1,·'gmx::IRestraintPotential::update()'],
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43 ········['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()'],44 ········['../classgmx_1_1Update.xhtml#afcb4065ad13efba2d3aa9b5225125e6f',·1,·'gmx::Update::Update()']
44 ········['../classgmx_1_1Update.xhtml',·1,·'gmx::Update'] 
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47 ····['update_5fcoords_31',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]],47 ····['update_5fcoords_31',·['update_coords',·['../classgmx_1_1Update.xhtml#a07bb5e84363cbcb95a10bc97647526e9',·1,·'gmx::Update']]],
48 ····['update_5fdisres_5fhistory_32',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]],48 ····['update_5fdisres_5fhistory_32',·['update_disres_history',·['../disre_8h.xhtml#a80a6326aadca6d0b6f6f4753e63648e7',·1,·'disre.cpp']]],
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68 ····['updategroupscog_49',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#af4073554edea0cc98542003e47f7dccd',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'],68 ····['updategroupscog_49',·['updategroupscog',·['../classgmx_1_1UpdateGroupsCog.xhtml#af4073554edea0cc98542003e47f7dccd',·1,·'gmx::UpdateGroupsCog::UpdateGroupsCog()'],
69 ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog']69 ········['../classgmx_1_1UpdateGroupsCog.xhtml',·1,·'gmx::UpdateGroupsCog']
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72 ····['updatehistory_51',·['updatehistory',·['../classgmx_1_1Awh.xhtml#ad138cec7cc1fefd7c1787d5f94279494',·1,·'gmx::Awh::updateHistory()'], 
73 ········['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()']72 ····['updatehistory_51',·['updatehistory',·['../structt__oriresdata.xhtml#a7806904b5f7dcb25d5dec4555be7b5ac',·1,·'t_oriresdata::updateHistory()'],
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75 ····['updatepositions_52',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],75 ····['updatepositions_52',·['updatePositions',·['../namespacegmx.xhtml#a5d079b5d5fedb7c55a119e1342cb7fd8',·1,·'gmx']]],
76 ····['updateprevsteppullcom_53',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],76 ····['updateprevsteppullcom_53',·['updatePrevStepPullCom',·['../pull_8h.xhtml#a95ef443e2830253d2aef461a2f811c4e',·1,·'pull.h']]],
77 ····['updatevelocities_54',·['updateVelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx']]],77 ····['updatevelocities_54',·['updateVelocities',·['../namespacegmx.xhtml#a2b97181f1d88633664f339242db99d74',·1,·'gmx']]],
78 ····['updatewithdatapoint_55',·['updateWithDataPoint',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a5293fc09bb63cc379eed9ca1fa20c760',·1,·'gmx::ExponentialMovingAverage']]],78 ····['updatewithdatapoint_55',·['updateWithDataPoint',·['../classgmx_1_1ExponentialMovingAverage.xhtml#a5293fc09bb63cc379eed9ca1fa20c760',·1,·'gmx::ExponentialMovingAverage']]],
79 ····['uppercorner_56',·['upperCorner',·['../structgmx_1_1GridDimensions.xhtml#acd92331d1b9d316fe200653256a9c88c',·1,·'gmx::GridDimensions']]],79 ····['uppercorner_56',·['upperCorner',·['../structgmx_1_1GridDimensions.xhtml#acd92331d1b9d316fe200653256a9c88c',·1,·'gmx::GridDimensions']]],
80 ····['upstring_57',·['upstring',·['../cstringutil_8h.xhtml#a74173c7afe5600452edf4956ae58bbe8',·1,·'cstringutil.cpp']]],80 ····['upstring_57',·['upstring',·['../cstringutil_8h.xhtml#a74173c7afe5600452edf4956ae58bbe8',·1,·'cstringutil.cpp']]],
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37 ····['fepstatevalue_3c_20real_20_3e_24',·['FEPStateValue&lt;·real·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],37 ····['fepstatevalue_3c_20real_20_3e_24',·['FEPStateValue&lt;·real·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],
38 ····['fepstatevalue_3c_20unsigned_20short_20_3e_25',·['FEPStateValue&lt;·unsigned·short·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],38 ····['fepstatevalue_3c_20unsigned_20short_20_3e_25',·['FEPStateValue&lt;·unsigned·short·&gt;',·['../structFEPStateValue.xhtml',·1,·'']]],
39 ····['fetchcoulombforcer_26',·['fetchCoulombForceR',·['../namespacegmx.xhtml#af4358df7df7ec8c2d2ad3014049c9ff0',·1,·'gmx']]],39 ····['fetchcoulombforcer_26',·['fetchCoulombForceR',·['../namespacegmx.xhtml#af4358df7df7ec8c2d2ad3014049c9ff0',·1,·'gmx']]],
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45 ····['fflib_30',·['ffLIB',·['../group__module__commandline.xhtml#gabcfe164407bc1fff8164f4779f0fe3ce',·1,·'filenm.h']]],45 ····['fflib_30',·['ffLIB',·['../group__module__commandline.xhtml#gabcfe164407bc1fff8164f4779f0fe3ce',·1,·'filenm.h']]],
46 ····['ffliboptrd_31',·['ffLIBOPTRD',·['../group__module__commandline.xhtml#gaa168a891bb48ca53f62f04697add97f4',·1,·'filenm.h']]],46 ····['ffliboptrd_31',·['ffLIBOPTRD',·['../group__module__commandline.xhtml#gaa168a891bb48ca53f62f04697add97f4',·1,·'filenm.h']]],
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48 ····['ffmult_33',·['ffMULT',·['../group__module__commandline.xhtml#ga50cb2de9aec8429fb44074a1bfdb19b2',·1,·'filenm.h']]],48 ····['ffmult_33',·['ffMULT',·['../group__module__commandline.xhtml#ga50cb2de9aec8429fb44074a1bfdb19b2',·1,·'filenm.h']]],
49 ····['ffopt_34',·['ffOPT',·['../group__module__commandline.xhtml#ga070f4190c2bc4a6af08333851ddf42ac',·1,·'filenm.h']]],49 ····['ffopt_34',·['ffOPT',·['../group__module__commandline.xhtml#ga070f4190c2bc4a6af08333851ddf42ac',·1,·'filenm.h']]],
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348 ········['../classForceHelperBuffers.xhtml',·1,·'ForceHelperBuffers']348 ········['../classForceHelperBuffers.xhtml',·1,·'ForceHelperBuffers']
349 ····]],349 ····]],
350 ····['forcemtscombined_201',·['forcemtscombined',·['../classgmx_1_1ForceBuffersView.xhtml#a166f7af032d4e40035ffec7b665ed572',·1,·'gmx::ForceBuffersView::forceMtsCombined()·const'],350 ····['forcemtscombined_201',·['forcemtscombined',·['../classgmx_1_1ForceBuffersView.xhtml#a166f7af032d4e40035ffec7b665ed572',·1,·'gmx::ForceBuffersView::forceMtsCombined()·const'],
351 ········['../classgmx_1_1ForceBuffersView.xhtml#a6c291c3c289aecea56104b7e79325558',·1,·'gmx::ForceBuffersView::forceMtsCombined()']351 ········['../classgmx_1_1ForceBuffersView.xhtml#a6c291c3c289aecea56104b7e79325558',·1,·'gmx::ForceBuffersView::forceMtsCombined()']
352 ····]],352 ····]],
353 ····['forcemtscombinedwithpadding_202',·['forceMtsCombinedWithPadding',·['../classgmx_1_1ForceBuffersView.xhtml#a297d8a01836b387a5ab1be510aed44fa',·1,·'gmx::ForceBuffersView']]],353 ····['forcemtscombinedwithpadding_202',·['forceMtsCombinedWithPadding',·['../classgmx_1_1ForceBuffersView.xhtml#a297d8a01836b387a5ab1be510aed44fa',·1,·'gmx::ForceBuffersView']]],
354 ····['forceoutput_2eh_203',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]],354 ····['forceoutput_2eh_203',·['forceoutput.h',·['../forceoutput_8h.xhtml',·1,·'']]],
 355 ····['forceoutputs_204',·['forceoutputs',·['../classgmx_1_1ForceOutputs.xhtml',·1,·'gmx::ForceOutputs'],
355 ····['forceoutputs_204',·['forceoutputs',·['../classgmx_1_1ForceOutputs.xhtml#abd589c42af0e81e787dd76f03d020187',·1,·'gmx::ForceOutputs::ForceOutputs()'],356 ········['../classgmx_1_1ForceOutputs.xhtml#abd589c42af0e81e787dd76f03d020187',·1,·'gmx::ForceOutputs::ForceOutputs()']
356 ········['../classgmx_1_1ForceOutputs.xhtml',·1,·'gmx::ForceOutputs'] 
357 ····]],357 ····]],
 358 ····['forceparam_205',·['forceparam',·['../classInteractionOfType.xhtml#a6baea034eb73978879f0a9d1fe80d938',·1,·'InteractionOfType::forceParam()'],
358 ····['forceparam_205',·['forceparam',·['../classInteractionOfType.xhtml#a9377381fa12dd22697c3e1b256cd8cf3',·1,·'InteractionOfType::forceParam()·const'],359 ········['../classInteractionOfType.xhtml#a9377381fa12dd22697c3e1b256cd8cf3',·1,·'InteractionOfType::forceParam()·const']
359 ········['../classInteractionOfType.xhtml#a6baea034eb73978879f0a9d1fe80d938',·1,·'InteractionOfType::forceParam()'] 
360 ····]],360 ····]],
361 ····['forceproviderinput_206',·['forceproviderinput',·['../classgmx_1_1ForceProviderInput.xhtml#a2f7907d0aae391014935b848ac4f3561',·1,·'gmx::ForceProviderInput::ForceProviderInput()'],361 ····['forceproviderinput_206',·['forceproviderinput',·['../classgmx_1_1ForceProviderInput.xhtml#a2f7907d0aae391014935b848ac4f3561',·1,·'gmx::ForceProviderInput::ForceProviderInput()'],
362 ········['../classgmx_1_1ForceProviderInput.xhtml',·1,·'gmx::ForceProviderInput']362 ········['../classgmx_1_1ForceProviderInput.xhtml',·1,·'gmx::ForceProviderInput']
363 ····]],363 ····]],
364 ····['forceprovideroutput_207',·['forceprovideroutput',·['../classgmx_1_1ForceProviderOutput.xhtml#a462f088782c665aa46acd9a7492853df',·1,·'gmx::ForceProviderOutput::ForceProviderOutput()'],364 ····['forceprovideroutput_207',·['forceprovideroutput',·['../classgmx_1_1ForceProviderOutput.xhtml#a462f088782c665aa46acd9a7492853df',·1,·'gmx::ForceProviderOutput::ForceProviderOutput()'],
365 ········['../classgmx_1_1ForceProviderOutput.xhtml',·1,·'gmx::ForceProviderOutput']365 ········['../classgmx_1_1ForceProviderOutput.xhtml',·1,·'gmx::ForceProviderOutput']
366 ····]],366 ····]],
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Offset 231, 17 lines modifiedOffset 231, 17 lines modified
231 ····]],231 ····]],
232 ····['optionsfinished_86',·['optionsfinished',·['../classgmx_1_1ICommandLineOptionsModule.xhtml#ace80320e3379cc01c79e52c2a51e4e56',·1,·'gmx::ICommandLineOptionsModule::optionsFinished()'],232 ····['optionsfinished_86',·['optionsfinished',·['../classgmx_1_1ICommandLineOptionsModule.xhtml#ace80320e3379cc01c79e52c2a51e4e56',·1,·'gmx::ICommandLineOptionsModule::optionsFinished()'],
233 ········['../classgmx_1_1IOptionsBehavior.xhtml#a0e51c68861417e488fcb2a61b425887a',·1,·'gmx::IOptionsBehavior::optionsFinished()'],233 ········['../classgmx_1_1IOptionsBehavior.xhtml#a0e51c68861417e488fcb2a61b425887a',·1,·'gmx::IOptionsBehavior::optionsFinished()'],
234 ········['../classgmx_1_1TimeUnitBehavior.xhtml#a39dbf3ae0c6cd27e41260525cdc81934',·1,·'gmx::TimeUnitBehavior::optionsFinished()'],234 ········['../classgmx_1_1TimeUnitBehavior.xhtml#a39dbf3ae0c6cd27e41260525cdc81934',·1,·'gmx::TimeUnitBehavior::optionsFinished()'],
235 ········['../classgmx_1_1SelectionOptionBehavior.xhtml#ac18e2436bac7d70a0a973166150b3683',·1,·'gmx::SelectionOptionBehavior::optionsFinished()'],235 ········['../classgmx_1_1SelectionOptionBehavior.xhtml#ac18e2436bac7d70a0a973166150b3683',·1,·'gmx::SelectionOptionBehavior::optionsFinished()'],
236 ········['../classgmx_1_1TrajectoryAnalysisModule.xhtml#afa3457cc922f1d16c4c19cec740e0442',·1,·'gmx::TrajectoryAnalysisModule::optionsFinished()']236 ········['../classgmx_1_1TrajectoryAnalysisModule.xhtml#afa3457cc922f1d16c4c19cec740e0442',·1,·'gmx::TrajectoryAnalysisModule::optionsFinished()']
237 ····]],237 ····]],
238 ····['optionsfinishing_87',·['optionsfinishing',·['../classgmx_1_1IOptionsBehavior.xhtml#a2d687df65d56514816478fcda042c3b1',·1,·'gmx::IOptionsBehavior::optionsFinishing()'],238 ····['optionsfinishing_87',·['optionsfinishing',·['../classgmx_1_1SelectionOptionBehavior.xhtml#ab968390f8410e64d43021d5d7455154b',·1,·'gmx::SelectionOptionBehavior::optionsFinishing()'],
239 ········['../classgmx_1_1TimeUnitBehavior.xhtml#a40693bc93fd435e9fb88c14f68dc709f',·1,·'gmx::TimeUnitBehavior::optionsFinishing()'],239 ········['../classgmx_1_1TimeUnitBehavior.xhtml#a40693bc93fd435e9fb88c14f68dc709f',·1,·'gmx::TimeUnitBehavior::optionsFinishing()'],
240 ········['../classgmx_1_1SelectionOptionBehavior.xhtml#ab968390f8410e64d43021d5d7455154b',·1,·'gmx::SelectionOptionBehavior::optionsFinishing()']240 ········['../classgmx_1_1IOptionsBehavior.xhtml#a2d687df65d56514816478fcda042c3b1',·1,·'gmx::IOptionsBehavior::optionsFinishing()']
241 ····]],241 ····]],
242 ····['optiontemplate_88',·['OptionTemplate',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],242 ····['optiontemplate_88',·['OptionTemplate',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],
243 ····['optiontemplate_3c_20bool_2c_20booleanoption_20_3e_89',·['OptionTemplate&lt;·bool,·BooleanOption·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],243 ····['optiontemplate_3c_20bool_2c_20booleanoption_20_3e_89',·['OptionTemplate&lt;·bool,·BooleanOption·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],
244 ····['optiontemplate_3c_20double_2c_20doubleoption_20_3e_90',·['OptionTemplate&lt;·double,·DoubleOption·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],244 ····['optiontemplate_3c_20double_2c_20doubleoption_20_3e_90',·['OptionTemplate&lt;·double,·DoubleOption·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],
245 ····['optiontemplate_3c_20enumtype_2c_20enumoption_3c_20enumtype_20_3e_20_3e_91',·['OptionTemplate&lt;·EnumType,·EnumOption&lt;·EnumType·&gt;·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],245 ····['optiontemplate_3c_20enumtype_2c_20enumoption_3c_20enumtype_20_3e_20_3e_91',·['OptionTemplate&lt;·EnumType,·EnumOption&lt;·EnumType·&gt;·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],
246 ····['optiontemplate_3c_20enumtype_2c_20legacyenumoption_3c_20enumtype_20_3e_20_3e_92',·['OptionTemplate&lt;·EnumType,·LegacyEnumOption&lt;·EnumType·&gt;·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],246 ····['optiontemplate_3c_20enumtype_2c_20legacyenumoption_3c_20enumtype_20_3e_20_3e_92',·['OptionTemplate&lt;·EnumType,·LegacyEnumOption&lt;·EnumType·&gt;·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],
247 ····['optiontemplate_3c_20float_2c_20floatoption_20_3e_93',·['OptionTemplate&lt;·float,·FloatOption·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],247 ····['optiontemplate_3c_20float_2c_20floatoption_20_3e_93',·['OptionTemplate&lt;·float,·FloatOption·&gt;',·['../classgmx_1_1OptionTemplate.xhtml',·1,·'gmx']]],
Offset 259, 31 lines modifiedOffset 259, 31 lines modified
259 ····['orientationstimeandensembleavbuffer_105',·['orientationsTimeAndEnsembleAvBuffer',·['../structt__oriresdata.xhtml#a9ca5caaf9f175ebf180358fffc6972db',·1,·'t_oriresdata']]],259 ····['orientationstimeandensembleavbuffer_105',·['orientationsTimeAndEnsembleAvBuffer',·['../structt__oriresdata.xhtml#a9ca5caaf9f175ebf180358fffc6972db',·1,·'t_oriresdata']]],
260 ····['other_106',·['Other',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0a6311ae17c1ee52b36e68aaf4ad066387',·1,·'gmx']]],260 ····['other_106',·['Other',·['../namespacegmx.xhtml#a73202d646d57bcc963d8afd5a16015f0a6311ae17c1ee52b36e68aaf4ad066387',·1,·'gmx']]],
261 ····['output_107',·['output',·['../page_trajectoryanalysisframework.xhtml#autotoc_md26',·1,·'Coordinate·data·output'],261 ····['output_107',·['output',·['../page_trajectoryanalysisframework.xhtml#autotoc_md26',·1,·'Coordinate·data·output'],
262 ········['../page_analysistemplate.xhtml#autotoc_md11',·1,·'Output']262 ········['../page_analysistemplate.xhtml#autotoc_md11',·1,·'Output']
263 ····]],263 ····]],
264 ····['output_20data_20analysisdata_108',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]],264 ····['output_20data_20analysisdata_108',·['Parallelizable·Handling·of·Output·Data·(analysisdata)',·['../group__module__analysisdata.xhtml',·1,·'']]],
265 ····['output_20data_20handling_109',·['output·data·handling',·['../page_analysisdata.xhtml',·1,·'Analysis·output·data·handling'],265 ····['output_20data_20handling_109',·['output·data·handling',·['../page_analysisdata.xhtml',·1,·'Analysis·output·data·handling'],
266 ········['../page_energyanalysisframework.xhtml#autotoc_md15',·1,·'Output·data·handling'], 
267 ········['../page_trajectoryanalysisframework.xhtml#autotoc_md25',·1,·'Output·data·handling']266 ········['../page_trajectoryanalysisframework.xhtml#autotoc_md25',·1,·'Output·data·handling'],
 267 ········['../page_energyanalysisframework.xhtml#autotoc_md15',·1,·'Output·data·handling']
268 ····]],268 ····]],
269 ····['outputadaptercontainer_2eh_110',·['outputadaptercontainer.h',·['../outputadaptercontainer_8h.xhtml',·1,·'']]],269 ····['outputadaptercontainer_2eh_110',·['outputadaptercontainer.h',·['../outputadaptercontainer_8h.xhtml',·1,·'']]],
270 ····['outputadapterpointer_111',·['OutputAdapterPointer',·['../namespacegmx.xhtml#a931d7c3f10f668b68f3307c9a23aac82',·1,·'gmx']]],270 ····['outputadapterpointer_111',·['OutputAdapterPointer',·['../namespacegmx.xhtml#a931d7c3f10f668b68f3307c9a23aac82',·1,·'gmx']]],
271 ····['outputadapters_2eh_112',·['outputadapters.h',·['../outputadapters_8h.xhtml',·1,·'(Global·Namespace)'],271 ····['outputadapters_2eh_112',·['outputadapters.h',·['../outputadapters_8h.xhtml',·1,·'(Global·Namespace)'],
272 ········['../tests_2outputadapters_8h.xhtml',·1,·'(Global·Namespace)']272 ········['../tests_2outputadapters_8h.xhtml',·1,·'(Global·Namespace)']
273 ····]],273 ····]],
274 ····['outputenv_5f_113',·['outputEnv_',·['../classgmx_1_1SimulatorEnv.xhtml#aa1aa20355975f59f3a92ff3e3b6926e3',·1,·'gmx::SimulatorEnv']]],274 ····['outputenv_5f_113',·['outputEnv_',·['../classgmx_1_1SimulatorEnv.xhtml#aa1aa20355975f59f3a92ff3e3b6926e3',·1,·'gmx::SimulatorEnv']]],
 275 ····['outputfile_114',·['outputfile',·['../classgmx_1_1FileNameOption.xhtml#a80e635f1f2b0eac13821b49a09a16936',·1,·'gmx::FileNameOption::outputFile()'],
275 ····['outputfile_114',·['outputfile',·['../classgmx_1_1TrajectoryFileOpener.xhtml#a95a59e0ec86cab7744c655097d17b211',·1,·'gmx::TrajectoryFileOpener::outputFile()'],276 ········['../classgmx_1_1TrajectoryFileOpener.xhtml#a95a59e0ec86cab7744c655097d17b211',·1,·'gmx::TrajectoryFileOpener::outputFile()']
276 ········['../classgmx_1_1FileNameOption.xhtml#a80e635f1f2b0eac13821b49a09a16936',·1,·'gmx::FileNameOption::outputFile()'] 
277 ····]],277 ····]],
278 ····['outputrequirementoptiondirector_115',·['OutputRequirementOptionDirector',·['../classgmx_1_1OutputRequirementOptionDirector.xhtml',·1,·'gmx']]],278 ····['outputrequirementoptiondirector_115',·['OutputRequirementOptionDirector',·['../classgmx_1_1OutputRequirementOptionDirector.xhtml',·1,·'gmx']]],
279 ····['outputrequirements_116',·['OutputRequirements',·['../structgmx_1_1OutputRequirements.xhtml',·1,·'gmx']]],279 ····['outputrequirements_116',·['OutputRequirements',·['../structgmx_1_1OutputRequirements.xhtml',·1,·'gmx']]],
280 ····['outputselector_117',·['outputselector',·['../classgmx_1_1OutputSelector.xhtml',·1,·'gmx::OutputSelector'],280 ····['outputselector_117',·['outputselector',·['../classgmx_1_1OutputSelector.xhtml#af79a9c1cb189a56a816f564b2ab506d6',·1,·'gmx::OutputSelector::OutputSelector()'],
 281 ········['../classgmx_1_1OutputSelector.xhtml',·1,·'gmx::OutputSelector'],
281 ········['../classgmx_1_1OutputSelector.xhtml#adfdcfbbeb5cbf85a8ec3cd2c0c92ab69',·1,·'gmx::OutputSelector::OutputSelector(const·Selection·&amp;sel)'],282 ········['../classgmx_1_1OutputSelector.xhtml#adfdcfbbeb5cbf85a8ec3cd2c0c92ab69',·1,·'gmx::OutputSelector::OutputSelector()']
282 ········['../classgmx_1_1OutputSelector.xhtml#af79a9c1cb189a56a816f564b2ab506d6',·1,·'gmx::OutputSelector::OutputSelector(OutputSelector·&amp;&amp;old)·noexcept=default'] 
283 ····]],283 ····]],
284 ····['outputselector_2eh_118',·['outputselector.h',·['../outputselector_8h.xhtml',·1,·'']]],284 ····['outputselector_2eh_118',·['outputselector.h',·['../outputselector_8h.xhtml',·1,·'']]],
285 ····['outputselectorpointer_119',·['OutputSelectorPointer',·['../namespacegmx.xhtml#a139b5367368caa9a3189d367ecb2ba36',·1,·'gmx']]],285 ····['outputselectorpointer_119',·['OutputSelectorPointer',·['../namespacegmx.xhtml#a139b5367368caa9a3189d367ecb2ba36',·1,·'gmx']]],
286 ····['outputsforces_120',·['outputsforces',·['../classgmx_1_1TorchModel.xhtml#a4586a9e3c5c8b909d66de4fb6ec7a9cd',·1,·'gmx::TorchModel::outputsForces()'],286 ····['outputsforces_120',·['outputsforces',·['../classgmx_1_1TorchModel.xhtml#a4586a9e3c5c8b909d66de4fb6ec7a9cd',·1,·'gmx::TorchModel::outputsForces()'],
287 ········['../classgmx_1_1INNPotModel.xhtml#a3932241bd98dba18e262ac05c53d69ba',·1,·'gmx::INNPotModel::outputsForces()']287 ········['../classgmx_1_1INNPotModel.xhtml#a3932241bd98dba18e262ac05c53d69ba',·1,·'gmx::INNPotModel::outputsForces()']
288 ····]],288 ····]],
289 ····['over_20mpi_121',·['Spatial·domain·decomposition·(for·parallelization·over·MPI)',·['../group__module__domdec.xhtml',·1,·'']]],289 ····['over_20mpi_121',·['Spatial·domain·decomposition·(for·parallelization·over·MPI)',·['../group__module__domdec.xhtml',·1,·'']]],
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Offset 76304, 14 lines modifiedOffset 76304, 20 lines modified
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76305 ······<name>main</name>76305 ······<name>main</name>
76306 ····</member>76306 ····</member>
76307 ··</compound>76307 ··</compound>
76308 ··<compound·refid="abstractdata_8cpp"·kind="file">76308 ··<compound·refid="abstractdata_8cpp"·kind="file">
76309 ····<name>abstractdata.cpp</name>76309 ····<name>abstractdata.cpp</name>
76310 ··</compound>76310 ··</compound>
 76311 ··<compound·refid="arraydata_8cpp"·kind="file">
 76312 ····<name>arraydata.cpp</name>
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 76314 ··<compound·refid="tests_2arraydata_8cpp"·kind="file">
 76315 ····<name>arraydata.cpp</name>
 76316 ··</compound>
76311 ··<compound·refid="dataframe_8cpp"·kind="file">76317 ··<compound·refid="dataframe_8cpp"·kind="file">
76312 ····<name>dataframe.cpp</name>76318 ····<name>dataframe.cpp</name>
76313 ··</compound>76319 ··</compound>
76314 ··<compound·refid="datamodule_8cpp"·kind="file">76320 ··<compound·refid="datamodule_8cpp"·kind="file">
76315 ····<name>datamodule.cpp</name>76321 ····<name>datamodule.cpp</name>
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76317 ··<compound·refid="datamodulemanager_8cpp"·kind="file">76323 ··<compound·refid="datamodulemanager_8cpp"·kind="file">
Offset 76331, 65 lines modifiedOffset 76337, 59 lines modified
76331 ··</compound>76337 ··</compound>
76332 ··<compound·refid="datastorage_8h"·kind="file">76338 ··<compound·refid="datastorage_8h"·kind="file">
76333 ····<name>datastorage.h</name>76339 ····<name>datastorage.h</name>
76334 ··</compound>76340 ··</compound>
76335 ··<compound·refid="framelocaldata_8h"·kind="file">76341 ··<compound·refid="framelocaldata_8h"·kind="file">
76336 ····<name>framelocaldata.h</name>76342 ····<name>framelocaldata.h</name>
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76338 ··<compound·refid="modules_2average_8cpp"·kind="file"> 
76339 ····<name>average.cpp</name> 
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76341 ··<compound·refid="tests_2average_8cpp"·kind="file"> 
76342 ····<name>average.cpp</name> 
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76348 ····<name>frameaverager.cpp</name>76348 ····<name>frameaverager.cpp</name>
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76354 ····<name>histogram.cpp</name> 
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76357 ····<name>histogram.cpp</name> 
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76360 ····<name>lifetime.cpp</name> 
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76362 ··<compound·refid="tests_2lifetime_8cpp"·kind="file"> 
76363 ····<name>lifetime.cpp</name> 
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76365 ··<compound·refid="plot_8cpp"·kind="file">76353 ··<compound·refid="plot_8cpp"·kind="file">
76366 ····<name>plot.cpp</name>76354 ····<name>plot.cpp</name>
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76368 ··<compound·refid="paralleloptions_8h"·kind="file">76356 ··<compound·refid="paralleloptions_8h"·kind="file">
76369 ····<name>paralleloptions.h</name>76357 ····<name>paralleloptions.h</name>
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76371 ··<compound·refid="analysisdata_8cpp"·kind="file">76359 ··<compound·refid="analysisdata_8cpp"·kind="file">
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76374 ··<compound·refid="tests_2analysisdata_8cpp"·kind="file">76362 ··<compound·refid="tests_2analysisdata_8cpp"·kind="file">
76375 ····<name>analysisdata.cpp</name>76363 ····<name>analysisdata.cpp</name>
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76377 ··<compound·refid="arraydata_8cpp"·kind="file">76365 ··<compound·refid="modules_2average_8cpp"·kind="file">
76378 ····<name>arraydata.cpp</name>76366 ····<name>average.cpp</name>
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Offset 465, 15 lines modifiedOffset 465, 15 lines modified
465 ··············<anchor·id="todo_1_todo000061"/>465 ··············<anchor·id="todo_1_todo000061"/>
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467 ············</para>467 ············</para>
468 ··········</listitem>468 ··········</listitem>
469 ··········<varlistentry>469 ··········<varlistentry>
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./usr/share/doc/gromacs/html/manual-2025.3-Debian_2025.3_1.pdf
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Offset 17693, 15 lines modifiedOffset 17693, 15 lines modified
17693 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons·Sijbers,·Balint·Soproni,·David17693 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons·Sijbers,·Balint·Soproni,·David
17694 van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten17694 van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,·Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten
17695 Wolf,·Artem·Zhmurov17695 Wolf,·Artem·Zhmurov
17696 Project·leaders:·Berk·Hess,·Erik·Lindahl17696 Project·leaders:·Berk·Hess,·Erik·Lindahl
17697 ©·1991·–·2000:17697 ©·1991·–·2000:
17698 Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen,17698 Department·of·Biophysical·Chemistry,·University·of·Groningen.·Nijenborgh·4,·9747·AG·Groningen,
17699 The·Netherlands.17699 The·Netherlands.
17700 ©·2001·–·2025:17700 ©·2001·–·2026:
17701 The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University,17701 The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology·and·Uppsala·University,
17702 Sweden.17702 Sweden.
17703 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time·of·the·contributors·–·our·first17703 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time·of·the·contributors·–·our·first
17704 priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information17704 priority·is·to·improve·the·software.·It·is·worked·on·continuously,·which·in·some·cases·might·mean·the·information
17705 is·not·entirely·correct.17705 is·not·entirely·correct.
17706 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer17706 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user·discussion·forum·or·the·developer
17707 discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·596)),·or·open·an·issue·on·our·issue17707 discussion·forum·(see·our·webpage·or·this·section·on·how·to·contribute·(page·596)),·or·open·an·issue·on·our·issue
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./usr/share/doc/gromacs/html/reference-manual/preface.html
    
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000115f0:·3e54·6865·2047·524f·4d41·4353·2064·6576··>The·GROMACS·dev000115f0:·3e54·6865·2047·524f·4d41·4353·2064·6576··>The·GROMACS·dev
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Offset 430, 15 lines modifiedOffset 430, 15 lines modified
430 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons430 Lindahl,·Erik·Marklund,·Pieter·Meulenhoff,·Teemu·Murtola,·Sander·Pronk,·Alfons
431 Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,431 Sijbers,·Balint·Soproni,·David·van·der·Spoel,·Peter·Tieleman,·Carsten·Uphoff,
432 Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov432 Jon·Vincent,·Teemu·Virolainen,·Christian·Wennberg,·Maarten·Wolf,·Artem·Zhmurov
433 Project·leaders:·Berk·Hess,·Erik·Lindahl433 Project·leaders:·Berk·Hess,·Erik·Lindahl
434 ©·1991·–·2000:434 ©·1991·–·2000:
435 ·····Department·of·Biophysical·Chemistry,·University·of·Groningen.435 ·····Department·of·Biophysical·Chemistry,·University·of·Groningen.
436 ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands.436 ·····Nijenborgh·4,·9747·AG·Groningen,·The·Netherlands.
437 ©·2001·–·2025:437 ©·2001·–·2026:
438 ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology438 ·····The·GROMACS·development·teams·at·the·Royal·Institute·of·Technology
439 ·····and·Uppsala·University,·Sweden.439 ·····and·Uppsala·University,·Sweden.
440 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time440 This·manual·is·not·complete·and·has·no·pretension·to·be·so,·due·to·lack·of·time
441 of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is441 of·the·contributors·–·our·first·priority·is·to·improve·the·software.·It·is
442 worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not442 worked·on·continuously,·which·in·some·cases·might·mean·the·information·is·not
443 entirely·correct.443 entirely·correct.
444 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user444 Comments·on·form·and·content·are·welcome,·please·send·them·to·the·user
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11190 ········"2023":·[38,·122,·193,·287,·301,·302,·322,·328,·329,·330,·331,·332,·333,·334,·373],11190 ········"2023":·[38,·122,·193,·287,·301,·302,·322,·328,·329,·330,·331,·332,·333,·334,·373],
11191 ········"2024":·[37,·38,·80,·83,·122,·195,·242,·315,·316,·317,·339,·345,·346,·347,·354,·355,·368],11191 ········"2024":·[37,·38,·80,·83,·122,·195,·242,·315,·316,·317,·339,·345,·346,·347,·354,·355,·368],
11192 ········"2025":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·328,·329,·330,·331,·332,·333,·334,·335,·336,·337,·338,·339,·340,·341,·342,·343,·344,·348,·349,·351,·352,·353,·354,·355,·356,·357,·359,·360,·361,·362,·363,·364,·365,·366,·367,·368,·369,·370,·371,·372,·373,·374,·375,·376,·377],11192 ········"2025":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66,·67,·68,·69,·70,·71,·72,·73,·74,·75,·76,·77,·78,·79,·80,·81,·82,·83,·84,·85,·86,·87,·88,·89,·90,·91,·92,·93,·94,·95,·96,·97,·98,·99,·100,·101,·102,·103,·104,·105,·106,·107,·108,·109,·110,·111,·112,·113,·114,·115,·116,·117,·118,·119,·120,·121,·122,·123,·124,·125,·126,·127,·128,·129,·130,·131,·132,·133,·134,·135,·136,·137,·138,·139,·140,·141,·142,·143,·144,·145,·146,·147,·148,·149,·150,·151,·152,·153,·154,·155,·156,·157,·158,·159,·160,·161,·162,·163,·164,·165,·166,·167,·168,·169,·170,·171,·172,·173,·174,·175,·176,·177,·178,·179,·180,·181,·182,·183,·184,·185,·186,·187,·188,·189,·190,·191,·192,·193,·194,·195,·196,·197,·198,·199,·200,·201,·202,·203,·204,·205,·206,·207,·208,·209,·210,·211,·212,·213,·214,·215,·216,·217,·218,·219,·220,·221,·222,·223,·224,·225,·226,·227,·228,·229,·230,·231,·232,·233,·234,·235,·236,·237,·238,·239,·240,·241,·242,·243,·244,·245,·246,·247,·248,·249,·250,·251,·252,·253,·254,·255,·256,·257,·258,·259,·260,·261,·262,·263,·264,·265,·266,·267,·268,·269,·270,·271,·272,·273,·274,·275,·276,·277,·278,·279,·280,·281,·282,·283,·284,·285,·286,·287,·288,·289,·290,·291,·292,·293,·294,·295,·296,·297,·298,·299,·300,·301,·302,·303,·304,·305,·306,·307,·308,·309,·310,·311,·312,·313,·314,·315,·316,·317,·318,·319,·320,·321,·322,·323,·324,·325,·326,·327,·328,·329,·330,·331,·332,·333,·334,·335,·336,·337,·338,·339,·340,·341,·342,·343,·344,·348,·349,·351,·352,·353,·354,·355,·356,·357,·359,·360,·361,·362,·363,·364,·365,·366,·367,·368,·369,·370,·371,·372,·373,·374,·375,·376,·377],
11193 ········"2026":·[249,·358],11193 ········"2026":·[0,·1,·2,·3,·4,·5,·6,·7,·8,·9,·10,·11,·12,·13,·14,·15,·16,·17,·18,·19,·20,·21,·22,·23,·24,·25,·26,·27,·28,·29,·30,·31,·32,·33,·34,·35,·36,·37,·38,·39,·40,·41,·42,·43,·44,·45,·46,·47,·48,·49,·50,·51,·52,·53,·54,·55,·56,·57,·58,·59,·60,·61,·62,·63,·64,·65,·66[·...·truncated·by·diffoscope;·len:·1522,·SHA:·d3458991ef89a0cfe3b7a3b6991a1a26f8eff7177f09c0f57e2a721b42a189d1·...·]],
11194 ········"2027":·249,11194 ········"2027":·249,
11195 ········"2028":·249,11195 ········"2028":·249,
11196 ········"2029":·223,11196 ········"2029":·223,
11197 ········"2031":·242,11197 ········"2031":·242,
11198 ········"2032":·[49,·193,·242],11198 ········"2032":·[49,·193,·242],
11199 ········"2033":·223,11199 ········"2033":·223,
11200 ········"2037":·[223,·239,·250],11200 ········"2037":·[223,·239,·250],
Generated by diffoscope 306