{"diffoscope-json-version": 1, "source1": "/srv/reproducible-results/rbuild-debian/r-b-build.fqvrQZHZ/b1/mira_4.9.6-5_armhf.changes", "source2": "/srv/reproducible-results/rbuild-debian/r-b-build.fqvrQZHZ/b2/mira_4.9.6-5_armhf.changes", "unified_diff": null, "details": [{"source1": "Files", "source2": "Files", "unified_diff": "@@ -1,5 +1,5 @@\n \n- cddc8bafa93681d47dffead5bf8e0b70 32392552 debug optional mira-assembler-dbgsym_4.9.6-5_armhf.deb\n- 6b3414f12a4f1aa59a5040c6b77f051e 2032196 science optional mira-assembler_4.9.6-5_armhf.deb\n+ 9badef2e22c24f6afbb1d3ff8b9a8321 32395400 debug optional mira-assembler-dbgsym_4.9.6-5_armhf.deb\n+ 5ae9135fc13bd12d1c3f3c6c643c110e 2031260 science optional mira-assembler_4.9.6-5_armhf.deb\n 98004a190e40c5250e5f54079df281e9 2801212 doc optional mira-doc_4.9.6-5_all.deb\n 3249dd119262d8e81bd8b716269ae24d 10443300 science optional mira-rfam-12s-rrna_4.9.6-5_all.deb\n"}, {"source1": "mira-assembler_4.9.6-5_armhf.deb", "source2": "mira-assembler_4.9.6-5_armhf.deb", "unified_diff": null, "details": [{"source1": "file list", "source2": "file list", "unified_diff": "@@ -1,3 +1,3 @@\n -rw-r--r-- 0 0 0 4 2020-09-17 11:04:27.000000 debian-binary\n--rw-r--r-- 0 0 0 2076 2020-09-17 11:04:27.000000 control.tar.xz\n--rw-r--r-- 0 0 0 2029928 2020-09-17 11:04:27.000000 data.tar.xz\n+-rw-r--r-- 0 0 0 2080 2020-09-17 11:04:27.000000 control.tar.xz\n+-rw-r--r-- 0 0 0 2028988 2020-09-17 11:04:27.000000 data.tar.xz\n"}, {"source1": "control.tar.xz", "source2": "control.tar.xz", "unified_diff": null, "details": [{"source1": "control.tar", "source2": "control.tar", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "unified_diff": null, "details": [{"source1": "./md5sums", "source2": "./md5sums", "comments": ["Files differ"], "unified_diff": null}]}]}]}, {"source1": "data.tar.xz", "source2": "data.tar.xz", "unified_diff": null, "details": [{"source1": "data.tar", "source2": "data.tar", "unified_diff": null, "details": [{"source1": "./usr/bin/mira", "source2": "./usr/bin/mira", "comments": ["File has been modified after NT_GNU_BUILD_ID has been applied."], "unified_diff": null, "details": [{"source1": "readelf --wide --program-header {}", "source2": "readelf --wide --program-header {}", "unified_diff": "@@ -1,19 +1,19 @@\n \n Elf file type is DYN (Position-Independent Executable file)\n Entry point 0x109c9\n There are 9 program headers, starting at offset 52\n \n Program Headers:\n Type Offset VirtAddr PhysAddr FileSiz MemSiz Flg Align\n- EXIDX 0x49582c 0x0049582c 0x0049582c 0x063c0 0x063c0 R 0x4\n+ EXIDX 0x495834 0x00495834 0x00495834 0x063c0 0x063c0 R 0x4\n PHDR 0x000034 0x00000034 0x00000034 0x00120 0x00120 R 0x4\n INTERP 0x000154 0x00000154 0x00000154 0x00019 0x00019 R 0x1\n [Requesting program interpreter: /lib/ld-linux-armhf.so.3]\n- LOAD 0x000000 0x00000000 0x00000000 0x49bbf0 0x49bbf0 R E 0x10000\n+ LOAD 0x000000 0x00000000 0x00000000 0x49bbf8 0x49bbf8 R E 0x10000\n LOAD 0x49bf10 0x004abf10 0x004abf10 0x04dd7 0x27a04 RW 0x10000\n DYNAMIC 0x49ce14 0x004ace14 0x004ace14 0x00150 0x00150 RW 0x4\n NOTE 0x000170 0x00000170 0x00000170 0x00044 0x00044 R 0x4\n GNU_STACK 0x000000 0x00000000 0x00000000 0x00000 0x00000 RW 0x10\n GNU_RELRO 0x49bf10 0x004abf10 0x004abf10 0x020f0 0x020f0 R 0x1\n \n Section to Segment mapping:\n"}, {"source1": "readelf --wide --sections {}", "source2": "readelf --wide --sections {}", "unified_diff": "@@ -13,18 +13,18 @@\n [ 8] .gnu.version_r VERNEED 000068d0 0068d0 000230 00 A 6 8 4\n [ 9] .rel.dyn REL 00006b00 006b00 003a90 08 A 5 0 4\n [10] .rel.plt REL 0000a590 00a590 000a48 08 AI 5 23 4\n [11] .init PROGBITS 0000afd8 00afd8 00000c 00 AX 0 0 4\n [12] .plt PROGBITS 0000afe4 00afe4 00100c 04 AX 0 0 4\n [13] .text PROGBITS 0000bff0 00bff0 3d9c0e 00 AX 0 0 8\n [14] .fini PROGBITS 003e5c00 3e5c00 000008 00 AX 0 0 4\n- [15] .rodata PROGBITS 003e5c08 3e5c08 089660 00 A 0 0 8\n- [16] .ARM.extab PROGBITS 0046f268 46f268 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OBJECT WEAK DEFAULT 15 _ZTSN5boost16thread_exceptionE\n 473: 0019b445 208 FUNC WEAK DEFAULT 13 _ZNSt6vectorIiSaIiEE17_M_realloc_insertIJRKiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_\n 474: 00028b7d 50 FUNC WEAK DEFAULT 13 _ZNK5boost6system14error_category10equivalentERKNS0_10error_codeEi\n 475: 00028bb1 8 FUNC WEAK DEFAULT 13 _ZNK5boost6system14error_category6failedEi\n- 476: 003f1fa8 33 OBJECT WEAK DEFAULT 15 _ZTSN5boost6detail15sp_counted_baseE\n+ 476: 003f1fb4 33 OBJECT WEAK DEFAULT 15 _ZTSN5boost6detail15sp_counted_baseE\n 477: 000159b9 80 FUNC WEAK DEFAULT 13 _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED0Ev\n- 478: 003f65cc 46 OBJECT WEAK DEFAULT 15 _ZTSN5boost6system6detail21system_error_categoryE\n+ 478: 003f65d4 46 OBJECT WEAK DEFAULT 15 _ZTSN5boost6system6detail21system_error_categoryE\n"}, {"source1": "readelf --wide --notes {}", "source2": "readelf --wide --notes {}", "unified_diff": "@@ -1,8 +1,8 @@\n \n Displaying notes found in: .note.gnu.build-id\n Owner Data size \tDescription\n- GNU 0x00000014\tNT_GNU_BUILD_ID (unique build ID bitstring)\t Build ID: 697af995bc86ab300b5ec275ef11b349a188d2ef\n+ GNU 0x00000014\tNT_GNU_BUILD_ID (unique build ID bitstring)\t Build ID: e990cd27fa18f39b8b2dc67024466399ba01934b\n \n Displaying notes found in: .note.ABI-tag\n Owner Data size \tDescription\n GNU 0x00000010\tNT_GNU_ABI_TAG (ABI version tag)\t OS: Linux, ABI: 3.2.0\n"}, {"source1": "strings --all --bytes=8 {}", "source2": "strings --all --bytes=8 {}", "unified_diff": "@@ -2624,17 +2624,17 @@\n Unknown exception caught, aborting the process.\n Please contact: bach@chevreux.org\n 1099511627776\n TCMALLOC_LARGE_ALLOC_REPORT_THRESHOLD\n Your system seems to be older or have some quirks with locale settings.\n Using the LC_ALL=C workaround.\n If you don't want that, fix your system ;-)\n-Compiled by: pbuilder1\n-Mon Jan 8 00:19:28 -12 2024\n-On: Linux ff4a 6.1.0-17-armmp-lpae #1 SMP Debian 6.1.69-1 (2023-12-30) armv7l GNU/Linux\n+Compiled by: pbuilder2\n+Tue Jan 9 02:53:02 +14 2024\n+On: Linux i-capture-the-hostname 6.1.0-17-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux\n miramer\t(MIRALIB version \n Author: Bastien Chevreux\t(bach@chevreux.org)\n Missing name of input.\n Loading data into memory ...\n cov=([\\d\\.]+)\n is missing a coverage number in the form of 'cov=xx.xxx' in its comments.\n Sorry, fix that.\n@@ -15318,15 +15318,15 @@\n Flowtype: \n undefined\n possible dead end ahead\n encountered dead end\n Unknown to me.\n Object not valid.\n void Flow::exitWhenUndefined()\n-shLMshLMshLMshLMH)?\n+shLMshLMshLMshLMP)?\n rstuvwxy\n YSAABWXR\n ysaabwxr\n NTGKCYSBAWRDMHVN\n FFLLSSSSYY**CC*WLLLLPPPPHHQQRRRRIIIMTTTTNNKKSSRRVVVVAAAADDEEGGGG---M---------------M---------------M----------------------------TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG\n FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSS**VVVVAAAADDEEGGGG--------------------------------MMMM---------------M------------TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG\n FFLLSSSSYY**CCWWTTTTPPPPHHQQRRRRIIMMTTTTNNKKSSRRVVVVAAAADDEEGGGG----------------------------------MM----------------------------TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG\n"}, {"source1": "objdump --line-numbers --disassemble --demangle --reloc --no-show-raw-insn --section=.text {}", "source2": "objdump --line-numbers --disassemble --demangle --reloc --no-show-raw-insn --section=.text {}", "unified_diff": "@@ -585,26 +585,26 @@\n \t\t\t@ instruction: 0xf04f405a\n \tandle\tr0, r1, r0, lsl #6\n \tmcr\t7, 2, pc, cr8, cr14, {7}\t@ \n \tldcllt\t0, cr11, [r0, #-48]!\t@ 0xffffffd0\n \tstrdeq\tr0, [sl], #-152\t@ 0xffffff68\n \tldrdeq\tr0, [r0], -r0\t@ \n \tsubeq\tr0, sl, ip, ror #19\n-\tmlaseq\tlr, r2, r0, r3\n-\teorseq\tr4, lr, r0, ror #9\n-\teorseq\tr3, lr, lr, asr #1\n-\teorseq\tr4, lr, r0, lsr r4\n+\tmlaseq\tlr, lr, r0, r3\n+\teorseq\tr4, lr, ip, ror #9\n+\tldrsbteq\tr3, [lr], -sl\n+\teorseq\tr4, lr, ip, lsr r4\n \tandeq\tr0, r0, r0, ror ip\n \tandeq\tr0, r0, r4, ror r7\n-\tldrhteq\tr4, [lr], -ip\n-\tldrhteq\tfp, [sp], -lr\n-\tldrsbteq\tr4, [lr], -r4\n-\teorseq\tr3, lr, lr\n-\teorseq\tr4, lr, ip, asr r4\n-\teorseq\tr3, lr, sl, asr #32\n+\teorseq\tr4, lr, r8, asr #1\n+\teorseq\tfp, sp, sl, asr #3\n+\teorseq\tr4, lr, r0, ror #1\n+\teorseq\tr3, lr, sl, lsl r0\n+\teorseq\tr4, lr, r8, ror #8\n+\teorseq\tr3, lr, r6, asr r0\n \tsubeq\tr0, sl, r0, lsr r9\n void boost::throw_exception(boost::condition_error const&):\n /usr/include/boost/throw_exception.hpp:162\n \t\t\t@ instruction: 0x4601b530\n \taddlt\tr4, r3, r7, lsl sp\n /usr/include/boost/throw_exception.hpp:165\n \tldrbtmi\tr2, [sp], #-68\t@ 0xffffffbc\n@@ -786,15 +786,15 @@\n \t\t\t@ instruction: 0x4601b530\n \taddlt\tr4, r3, r3, lsl sp\n /usr/include/boost/throw_exception.hpp:165\n \tldrbtmi\tr2, [sp], #-32\t@ 0xffffffe0\n /usr/include/boost/throw_exception.hpp:162\n \t\t\t@ instruction: 0xf7fe9101\n /usr/include/boost/throw_exception.hpp:165\n-\tblmi\t487f10 , std::allocator >@@Base+0x7fec4>\n+\tblmi\t487f10 , std::allocator >@@Base+0x7febc>\n \tstmdbls\tr1, {r2, r9, sl, lr}\n /usr/include/boost/exception/exception.hpp:399\n \tandcc\tr5, r8, #15335424\t@ 0xea0000\n \tblcs\t14a9a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa680c>\n /usr/include/boost/function/function_base.hpp:705\n \tldmdb\tr2, {r0, r1, r2, r3, r4, r5, r6, r7, r8, r9, sl, ip, sp, lr, pc}^\n /usr/include/boost/throw_exception.hpp:129\n@@ -916,15 +916,15 @@\n \tmcr\t7, 4, pc, cr12, cr14, {7}\t@ \n /usr/include/boost/regex/v4/match_results.hpp:575\n \t\t\t@ instruction: 0xf7ff4630\n \t\t\t@ instruction: 0xf7ffe9fa\n \tsvclt\t0x0000e94c\n \tldrdeq\tr0, [sl], #-94\t@ 0xffffffa2\n \tldrdeq\tr0, [r0], -r0\t@ \n-\tmlaseq\tpc, lr, sl, r6\t@ \n+\teorseq\tr6, pc, r6, lsr #21\n \tsubeq\tr0, sl, r0, asr #11\n \t\t\t@ instruction: 0x00000fb0\n \tandeq\tr0, r0, r0, lsl r8\n \tandeq\tr0, r0, ip, lsr r7\n \tandeq\tr0, r0, r0, ror #17\n void boost::conversion::detail::throw_bad_cast, std::allocator > >():\n /usr/include/boost/lexical_cast/bad_lexical_cast.hpp:98\n@@ -1062,26 +1062,26 @@\n \t\t\t@ instruction: 0xf04f405a\n \tandle\tr0, r1, r0, lsl #6\n \tbl\tfe94ab88 , std::allocator >@@Base+0xfe49ddec>\n \tldcllt\t0, cr11, [r0, #-48]!\t@ 0xffffffd0\n \tstrheq\tr0, [sl], #-64\t@ 0xffffffc0\n \tldrdeq\tr0, [r0], -r0\t@ \n \tsubeq\tr0, sl, r4, lsr #9\n-\teorseq\tr2, lr, sl, asr #22\n-\tmlaseq\tlr, r8, pc, r3\t@ \n-\teorseq\tr2, lr, r6, lsl #23\n-\teorseq\tr3, lr, r8, ror #29\n+\teorseq\tr2, lr, r6, asr fp\n+\teorseq\tr3, lr, r4, lsr #31\n+\tmlaseq\tlr, r2, fp, r2\n+\tldrshteq\tr3, [lr], -r4\n \tandeq\tr0, r0, r0, ror ip\n \tandeq\tr0, r0, r4, ror r7\n-\teorseq\tr3, lr, r4, ror fp\n-\teorseq\tsl, sp, r6, ror ip\n-\teorseq\tr3, lr, ip, lsl #23\n-\teorseq\tr2, lr, r6, asr #21\n-\teorseq\tr3, lr, r4, lsl pc\n-\teorseq\tr2, lr, r2, lsl #22\n+\teorseq\tr3, lr, r0, lsl #23\n+\teorseq\tsl, sp, r2, lsl #25\n+\tmlaseq\tlr, r8, fp, r3\n+\tldrsbteq\tr2, [lr], -r2\n+\teorseq\tr3, lr, r0, lsr #30\n+\teorseq\tr2, lr, lr, lsl #22\n \tsubeq\tr0, sl, r8, ror #7\n std::basic_ostream >& std::endl >(std::basic_ostream >&) [clone .isra.0]:\n /usr/include/c++/10/ostream:682\n \tldrblt\tr6, [r0, #-2051]!\t@ 0xfffff7fd\n /usr/include/c++/10/ostream:681\n \t\t\t@ instruction: 0xf8534e11\n \tldrbtmi\tr1, [lr], #-3084\t@ 0xfffff3f4\n@@ -1151,15 +1151,15 @@\n \tsvcmi\t0x00f0e92d\n \t\t\t@ instruction: 0xf8df460d\n \tstc\t6, cr2, [sp, #-432]!\t@ 0xfffffe50\n \tvqdmlsl.s32\tq4, d13, d2\n \t\t\t@ instruction: 0xf8df5dfc\n \tldrbtmi\tr3, [sl], #-1636\t@ 0xfffff99c\n \t\t\t@ instruction: 0x4660f8df\n-\tbeq\t4484c0 , std::allocator >@@Base+0x40474>\n+\tbeq\t4484c0 , std::allocator >@@Base+0x4046c>\n \t\t\t@ instruction: 0xf10d9101\n /usr/include/c++/10/bits/basic_string.h:160\n \tldrbtmi\tr0, [ip], #-2592\t@ 0xfffff5e0\n ./src/progs/mira.C:106\n \tcfcpysge\tmvf9, mvf14\n /usr/include/c++/10/bits/basic_string.h:157\n \tldmpl\tr0, {r2, r4, r8, r9, sl, fp, sp, pc}^\n@@ -1314,15 +1314,15 @@\n \t\t\t@ instruction: 0xf8dfef64\n /usr/include/c++/10/bits/basic_string.h:6187\n \t\t\t@ instruction: 0x463014f4\n \t\t\t@ instruction: 0xf7fe4479\n \tbllt\tfe048854 , std::allocator >@@Base+0xfdb9bab8>\n ./src/progs/mira.C:155\n \tstrbtpl\tpc, [r8], #2271\t@ 0x8df\t@ \n-\tbeq\t448684 , std::allocator >@@Base+0x40638>\n+\tbeq\t448684 , std::allocator >@@Base+0x40630>\n \tstmdbls\tr1, {r9, fp, ip, pc}\n \t\t\t@ instruction: 0xf02f5954\n \t\t\t@ instruction: 0xf04fff39\n ./src/progs/mira.C:150\n \tldmdavs\tr0!, {r8, fp}\n /usr/include/c++/10/bits/basic_string.h:231\n \taddsmi\tr9, r0, #12288\t@ 0x3000\n@@ -1374,15 +1374,15 @@\n \t\t\t@ instruction: 0xf8dfb130\n /usr/include/c++/10/bits/basic_string.h:6187\n \tldrtmi\tr1, [r0], -r4, ror #8\n \t\t\t@ instruction: 0xf7fe4479\n \tbllt\ta487a8 , std::allocator >@@Base+0x59ba0c>\n ./src/progs/mira.C:169\n \tldrtpl\tpc, [ip], #-2271\t@ 0xfffff721\t@ \n-\tbeq\t448730 , std::allocator >@@Base+0x406e4>\n+\tbeq\t448730 , std::allocator >@@Base+0x406dc>\n \tstmdbls\tr1, {r9, fp, ip, pc}\n \t\t\t@ instruction: 0xf03d5954\n \tstr\tpc, [r8, r7, ror #26]!\n /usr/include/c++/10/bits/char_traits.h:396\n \t\t\t@ instruction: 0xf43f2800\n \tstrbmi\tsl, [r8], -r1, lsr #30\n /usr/include/c++/10/bits/basic_string.h:187\n@@ -1394,15 +1394,15 @@\n \teorsvs\tr6, r8, r9, lsr #16\n \t\t\t@ instruction: 0x462260b9\n /usr/include/c++/10/bits/char_traits.h:402\n \t\t\t@ instruction: 0xf7fe4641\n \tldr\tlr, [r1, -r0, asr #23]\n ./src/progs/mira.C:166\n \tstrmi\tpc, [r4], #-2271\t@ 0xfffff721\n-\tbeq\t448768 , std::allocator >@@Base+0x4071c>\n+\tbeq\t448768 , std::allocator >@@Base+0x40714>\n \tstmdbls\tr1, {r8, r9, fp, ip, pc}\n \t\t\t@ instruction: 0xf02c591c\n \tstr\tpc, [ip, r5, lsl #29]\n /usr/include/c++/10/bits/basic_string.h:6187\n \tstrne\tpc, [ip], #-2271\t@ 0xfffff721\n \tldrbtmi\tr4, [r9], #-1584\t@ 0xfffff9d0\n \tmcr\t7, 0, pc, cr10, cr14, {7}\t@ \n@@ -1458,15 +1458,15 @@\n ./src/progs/mira.C:181\n \tldmibmi\tr4, {r3, r7, r8, fp, ip, sp, pc}^\n ./src/progs/mira.C:182\n \tbls\t1e85c , std::allocator >::~basic_stringbuf()@@Base+0x8ea4>\n \t\t\t@ instruction: 0xf0255854\n \tbls\t8b0d8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x573a0>\n ./src/progs/mira.C:183\n-\tbne\t448828 , std::allocator >@@Base+0x407dc>\n+\tbne\t448828 , std::allocator >@@Base+0x407d4>\n \t\t\t@ instruction: 0xf0264628\n \tstrtmi\tpc, [r8], -r9, lsl #23\n ./src/progs/mira.C:150\n \tstmdbeq\tr0, {r0, r1, r2, r3, r6, ip, sp, lr, pc}\n ./src/progs/../../src/modules/mod_diff.H:40\n \tldc2\t0, cr15, [r4, #16]\n \tldmibmi\tsl, {r0, r1, r3, r5, r8, r9, sl, sp, lr, pc}^\n@@ -1500,15 +1500,15 @@\n ./src/progs/mira.C:189\n \t\t\t@ instruction: 0x4db8b988\n ./src/progs/mira.C:190\n \tstmdbls\tr0, {r3, r4, r5, r9, sl, lr}\n \t\t\t@ instruction: 0xf004594c\n \tbls\t8bce8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x57fb0>\n ./src/progs/mira.C:191\n-\tbne\t448898 , std::allocator >@@Base+0x4084c>\n+\tbne\t448898 , std::allocator >@@Base+0x40844>\n \t\t\t@ instruction: 0xf02c4638\n \t\t\t@ instruction: 0x4638f8fb\n ./src/progs/mira.C:150\n \tstmdbeq\tr0, {r0, r1, r2, r3, r6, ip, sp, lr, pc}\n ./src/progs/mira.C:190\n \tblx\t194905a , std::allocator >@@Base+0x149c2be>\n \tstmibmi\tr2, {r0, r1, r4, r5, r6, r7, r9, sl, sp, lr, pc}^\n@@ -1517,15 +1517,15 @@\n \tldcl\t7, cr15, [r0, #-1016]!\t@ 0xfffffc08\n ./src/progs/mira.C:195\n \tldmdavs\tr0!, {r3, r5, r6, r8, fp, ip, sp, pc}\n ./src/progs/mira.C:196\n \tbcs\t18eb064 , std::allocator >@@Base+0x143e2c8>\n \tbls\t81134 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x4d3fc>\n ./src/progs/mira.C:200\n-\tbne\t4488c4 , std::allocator >@@Base+0x40878>\n+\tbne\t4488c4 , std::allocator >@@Base+0x40870>\n \t\t\t@ instruction: 0xf0384628\n \tstrtmi\tpc, [r8], -sp, ror #29\n ./src/progs/mira.C:199\n \t\t\t@ instruction: 0xf8d8f030\n \tldmibmi\tr9!, {r0, r2, r3, r4, r6, r7, r9, sl, sp, lr, pc}\n /usr/include/c++/10/bits/basic_string.h:6187\n \tldrbtmi\tr4, [r9], #-1584\t@ 0xfffff9d0\n@@ -1554,15 +1554,15 @@\n \tldrbtmi\tr4, [r9], #-1665\t@ 0xfffff97f\n /usr/include/c++/10/ostream:611\n \tldcl\t7, cr15, [r2], #-1016\t@ 0xfffffc08\n /usr/include/c++/10/ostream:113\n \t\t\t@ instruction: 0xf7fe4648\n \tstmdbls\tr1, {r2, r4, r9, sl, fp, sp, lr, pc}\n ./src/progs/mira.C:207\n-\tbeq\t448924 , std::allocator >@@Base+0x408d8>\n+\tbeq\t448924 , std::allocator >@@Base+0x408d0>\n \tstc2l\t0, cr15, [ip, #188]!\t@ 0xbc\n \tstcmi\t6, cr14, [pc], {177}\t@ 0xb1\n ./src/progs/mira.C:197\n \tstmibmi\tr6!, {r8, r9, fp, ip, pc}\n \tldrbtmi\tr5, [r9], #-2332\t@ 0xfffff6e4\n \t\t\t@ instruction: 0xf7fe4620\n \tstrb\tlr, [r0, r0, ror #21]\n@@ -2124,23 +2124,23 @@\n \tldrbtmi\tr3, [r9], #-220\t@ 0xffffff24\n \tblx\t7c975c , std::allocator >@@Base+0x31c9c0>\n \tandscs\tr4, r2, #3391488\t@ 0x33c000\n \tldrbtmi\tsl, [r9], #-2132\t@ 0xfffff7ac\n \trscscs\tpc, r8, r4, lsl #17\n \tblx\t5c976c , std::allocator >@@Base+0x11c9d0>\n /usr/include/c++/10/bits/hashtable.h:504\n-\tblge\t3f7b58 \n+\tblge\t3f7b58 \n \ttstls\tr5, r3, lsl sl\n /usr/include/c++/10/bits/stl_pair.h:353\n \tldceq\t0, cr15, [r5], {79}\t@ 0x4f\n /usr/include/c++/10/bits/hashtable.h:504\n \t\t\t@ instruction: 0xf6099304\n \tandls\tr2, r3, #140\t@ 0x8c\n \tldmdbge\tr0, {r1, r3, r8, ip, pc}\n-\tblge\t472344 , std::allocator >@@Base+0x6a2f8>\n+\tblge\t472344 , std::allocator >@@Base+0x6a2f0>\n \tmovwls\tr9, #4354\t@ 0x1102\n \tbge\t531f5c , std::allocator >@@Base+0x851c0>\n \tstrtmi\tr9, [r1], -r8, lsl #2\n \tmovwls\tr9, #37376\t@ 0x9200\n \tandls\tr2, ip, #0, 6\n \t\t\t@ instruction: 0xf8844632\n /usr/include/c++/10/bits/stl_pair.h:353\n@@ -2287,15 +2287,15 @@\n \t\t\t@ instruction: 0xf8df4620\n \tldrbtmi\tr9, [r9], #-424\t@ 0xfffffe58\n /usr/include/boost/thread/exceptions.hpp:135\n \tldrdlt\tpc, [r4, pc]!\t@ \n /usr/include/boost/system/system_error.hpp:34\n \tb\tfcb8e4 , std::allocator >@@Base+0xb1eb48>\n /usr/include/c++/10/bits/basic_string.h:160\n-\tbne\t449150 , std::allocator >@@Base+0x41104>\n+\tbne\t449150 , std::allocator >@@Base+0x410fc>\n /usr/include/boost/system/system_error.hpp:34\n \tandcs\tr6, r1, #167\t@ 0xa7\n \tmovwcs\tr7, #802\t@ 0x322\n /usr/include/boost/thread/pthread/mutex.hpp:51\n \t\t\t@ instruction: 0xf8554620\n /usr/include/boost/system/system_error.hpp:34\n \tstmib\tr4, {r0, r3, sp, lr}^\n@@ -2387,51 +2387,51 @@\n \tsubeq\tr3, sl, r4, ror #17\n \tstrheq\tpc, [r9], #-170\t@ 0xffffff56\t@ \n \tandeq\tr0, r0, r0, ror #21\n \tsubeq\tr0, sl, r0, asr fp\n \tandeq\tr0, r0, r8, lsr #27\n \tandeq\tr0, r0, r4, lsr #19\n \tandeq\tr0, r0, ip, lsl ip\n-\teorseq\tr2, pc, r0, lsl #31\n+\teorseq\tr2, pc, r8, lsl #31\n \tandeq\tr0, r0, r4, ror #14\n \tandeq\tr0, r0, r0, lsl r6\n \tsubeq\tr3, sl, ip, asr #14\n \tsubeq\tr3, sl, lr, lsr r7\n \tsubeq\tr3, sl, r2, lsr r7\n \tandeq\tr0, r0, r4, ror #20\n \tsubeq\tr3, sl, r8, lsl r7\n \tsubeq\tr0, sl, r6, lsr #19\n-\teorseq\tr9, pc, r4, lsr #21\n-\teorseq\tsp, sp, r8, lsl r5\n-\teorseq\tfp, sp, lr, ror #26\n-\teorseq\tfp, sp, r4, ror #26\n+\teorseq\tr9, pc, ip, lsr #21\n+\teorseq\tsp, sp, r4, lsr #10\n+\teorseq\tfp, sp, sl, ror sp\n+\teorseq\tfp, sp, r0, ror sp\n+\teorseq\tfp, sp, r6, ror #26\n \teorseq\tfp, sp, sl, asr sp\n-\teorseq\tfp, sp, lr, asr #26\n-\tmlaseq\tsp, r0, r4, sp\n-\teorseq\tsp, sp, r6, lsl #9\n-\teorseq\tsp, sp, lr, lsr #9\n-\teorseq\tfp, sp, sl, lsl sp\n+\tmlaseq\tsp, ip, r4, sp\n+\tmlaseq\tsp, r2, r4, sp\n+\tldrhteq\tsp, [sp], -sl\n+\teorseq\tfp, sp, r6, lsr #26\n \tldrdeq\tr0, [r0], -ip\n \tsubeq\tr3, sl, r6, lsl #12\n \tumaaleq\tr0, sl, r6, r8\n-\tmlaseq\tpc, r8, r9, r9\t@ \n-\teorseq\tsp, sp, r8, lsl #8\n-\teorseq\tsp, sp, r4, asr #7\n-\teorseq\tfp, sp, r2, ror ip\n-\teorseq\tsp, sp, sl, lsr #7\n-\teorseq\tsp, sp, lr, lsl #7\n+\teorseq\tr9, pc, r0, lsr #19\n+\teorseq\tsp, sp, r4, lsl r4\n+\tldrsbteq\tsp, [sp], -r0\n+\teorseq\tfp, sp, lr, ror ip\n+\tldrhteq\tsp, [sp], -r6\n+\tmlaseq\tsp, sl, r3, sp\n \tsubeq\tr3, sl, r8, asr #10\n \tldrdeq\tr0, [sl], #-122\t@ 0xffffff86\n \t\t\t@ instruction: 0x00000fb8\n \tandeq\tr0, r0, r4, lsl lr\n \tandeq\tr0, r0, r8, lsr #29\n \tstrdeq\tr0, [r0], -r0\t@ \n \tstrheq\tpc, [r9], #-110\t@ 0xffffff92\t@ \n \tandeq\tr0, r0, r4, lsr lr\n-\teorseq\tfp, sp, r6, asr #22\n+\teorseq\tfp, sp, r2, asr fp\n \tandeq\tr1, r0, r4, lsr r0\n \tldrdeq\tr0, [r0], -r4\n \tsubeq\tr3, sl, r6, asr r4\n \tsubeq\tr3, sl, r8, asr #8\n \tsubeq\tr3, sl, ip, lsr r4\n \tsubeq\tr3, sl, r0, lsr r4\n \tsubeq\tr3, sl, r4, lsl r4\n@@ -2803,15 +2803,15 @@\n /usr/include/c++/10/iostream:74\n \tmrcmi\t4, 0, r4, cr4, cr12, {3}\n \tstreq\tpc, [r0, -r4, lsl #2]!\n ./src/modules/misc.C:164\n \t\t\t@ instruction: 0x4638447d\n /usr/include/c++/10/iostream:74\n \t\t\t@ instruction: 0xf7fd447e\n-\tblmi\t489b94 , std::allocator >@@Base+0x81b48>\n+\tblmi\t489b94 , std::allocator >@@Base+0x81b40>\n \tsvcmi\t0x00114638\n \tstmiapl\tr9!, {r1, r4, r5, r9, sl, lr}^\n \t\t\t@ instruction: 0xf7fd9601\n \tandcs\tlr, r0, r6, lsr #27\n /usr/include/c++/10/bits/hashtable.h:451\n \tandeq\tlr, r5, r4, asr #19\n \ttsteq\tr8, r4, lsl #2\t@ \n@@ -3103,15 +3103,15 @@\n /usr/include/c++/10/iostream:74\n \tmrcmi\t4, 0, r4, cr2, cr12, {3}\n \tstreq\tpc, [ip, -r4, lsl #2]!\n ./src/mira/read.C:7301\n \t\t\t@ instruction: 0x4638447d\n /usr/include/c++/10/iostream:74\n \t\t\t@ instruction: 0xf7fd447e\n-\tblmi\t409850 , std::allocator >@@Base+0x1804>\n+\tblmi\t409850 , std::allocator >@@Base+0x17fc>\n \t\t\t@ instruction: 0x46384632\n \tstrls\tr5, [r1], -r9, ror #17\n \tstc\t7, cr15, [r4], {253}\t@ 0xfd\n ./src/mira/read.C:81\n \tandcs\tr4, r0, ip, lsl #18\n ./src/mira/../../src/mira/read.H:89\n \tstmib\tr4, {r5, r7, r8, r9, pc}^\n@@ -3407,17 +3407,17 @@\n \t\t\t@ instruction: 0xf7fd40f0\n ./src/mira/assembly_pbcorrect.C:63\n \tsvclt\t0x0000ba67\n \tsubeq\tr3, fp, ip, ror #31\n \tldrdeq\tlr, [r9], #-168\t@ 0xffffff58\n \tsubeq\tpc, r9, r4, ror fp\t@ \n \tandeq\tr0, r0, r0, ror #21\n-\tldrsbteq\tsl, [pc], -r8\n+\teorseq\tsl, pc, r0, ror #15\n \tandeq\tr0, r0, ip, lsl ip\n-\tldrsbteq\tsl, [pc], -r4\n+\tldrsbteq\tsl, [pc], -ip\n _GLOBAL__sub_I__ZN11skimedges_t10stdSortCmpERKS_S1_():\n ./src/mira/assembly_reduceskimhits.C:2910\n \tcfstr32mi\tmvfx11, [r8], {56}\t@ 0x38\n \tldrbtmi\tr4, [ip], #-3336\t@ 0xfffff2f8\n /usr/include/c++/10/iostream:74\n \tldrbtmi\tr4, [sp], #-1568\t@ 0xfffff9e0\n \tbl\tffd4c4fc , std::allocator >@@Base+0xff89f760>\n@@ -3896,16 +3896,16 @@\n \tsvclt\t0x0000bfc7\n \tstrdeq\tr4, [ip], #-86\t@ 0xffffffaa\n \tsubeq\tlr, r9, r2, asr #12\n \tldrdeq\tpc, [r9], #-110\t@ 0xffffff92\n \tandeq\tr0, r0, r0, ror #21\n \tandeq\tr0, r0, ip, lsl ip\n \tmuleq\tr0, r0, r6\n-\tsubeq\tr1, r1, sl, lsr lr\n-\tumaaleq\tr1, r1, lr, lr\n+\tsubeq\tr1, r1, r2, asr #28\n+\tsubeq\tr1, r1, r6, lsr #29\n _GLOBAL__sub_I__ZN17PlacedContigReadsD2Ev():\n ./src/mira/pcrcontainer.C:894\n \tcfstr32mi\tmvfx11, [r8], {56}\t@ 0x38\n \tldrbtmi\tr4, [ip], #-3336\t@ 0xfffff2f8\n /usr/include/c++/10/iostream:74\n \tldrbtmi\tr4, [sp], #-1568\t@ 0xfffff9e0\n \tldmdb\tr2, {r0, r2, r3, r4, r5, r6, r7, r8, r9, sl, ip, sp, lr, pc}^\n@@ -4416,72 +4416,72 @@\n \tldrdeq\tr0, [r0], -r0\t@ \n \tldrdeq\tr4, [ip], #-72\t@ 0xffffffb8\n \tsubeq\tlr, r9, lr, ror #7\n \tandeq\tr0, r0, r0, ror #21\n \tsubeq\tpc, r9, r4, lsl #9\n \tandeq\tr0, r0, r0, asr #16\n \tstrdeq\tr0, [r0], -r4\n-\tstrheq\tr2, [r1], #-178\t@ 0xffffff4e\n-\tsubeq\tr2, r1, r0, lsr #23\n+\tstrheq\tr2, [r1], #-186\t@ 0xffffff46\n+\tsubeq\tr2, r1, r8, lsr #23\n \tsubeq\tr4, ip, r8, lsr r4\n \tsubeq\tr4, ip, ip, lsl r4\n \tstrdeq\tr4, [ip], #-58\t@ 0xffffffc6\n \tandeq\tr1, r0, ip, ror r0\n \tsubeq\tpc, r9, r4, asr #7\n \tandeq\tr0, r0, ip, lsl sl\n-\tsubeq\tr2, r1, r4, lsr fp\n+\tsubeq\tr2, r1, ip, lsr fp\n \tandeq\tr0, r0, r8, lsr #25\n-\teorseq\tip, pc, ip, asr #9\n-\teorseq\tpc, lr, r4, lsl r1\t@ \n-\tldrshteq\tip, [lr], -r6\n-\tsubeq\tr6, r0, sl, asr #25\n-\tldrdeq\tr2, [r1], #-174\t@ 0xffffff52\n+\tldrsbteq\tip, [pc], -r4\n+\teorseq\tpc, lr, ip, lsl r1\t@ \n+\tldrshteq\tip, [lr], -lr\n+\tldrdeq\tr6, [r0], #-194\t@ 0xffffff3e\n+\tsubeq\tr2, r1, r6, ror #21\n \tandeq\tr0, r0, ip, lsl #30\n \tandeq\tr0, r0, r0, lsr #22\n-\teorseq\tr9, lr, r2, lsr #20\n-\teorseq\tr9, lr, r6, lsl sl\n+\teorseq\tr9, lr, sl, lsr #20\n+\teorseq\tr9, lr, lr, lsl sl\n+\tsubeq\tr2, r1, r6, asr #20\n+\tsubeq\tr2, r1, r2, asr #20\n \tsubeq\tr2, r1, lr, lsr sl\n \tsubeq\tr2, r1, sl, lsr sl\n \tsubeq\tr2, r1, r6, lsr sl\n \tsubeq\tr2, r1, r2, lsr sl\n \tsubeq\tr2, r1, lr, lsr #20\n \tsubeq\tr2, r1, sl, lsr #20\n \tsubeq\tr2, r1, r6, lsr #20\n-\tsubeq\tr2, r1, r2, lsr #20\n-\tsubeq\tr2, r1, lr, lsl sl\n+\tsubeq\tr2, r1, r8, lsl sl\n+\tsubeq\tr2, r1, r4, lsl sl\n \tsubeq\tr2, r1, r0, lsl sl\n \tsubeq\tr2, r1, ip, lsl #20\n \tsubeq\tr2, r1, r8, lsl #20\n \tsubeq\tr2, r1, r4, lsl #20\n \tsubeq\tr2, r1, r0, lsl #20\n-\tstrdeq\tr2, [r1], #-156\t@ 0xffffff64\n-\tstrdeq\tr2, [r1], #-152\t@ 0xffffff68\n-\tstrdeq\tr2, [r1], #-152\t@ 0xffffff68\n-\tstrdeq\tr2, [r1], #-146\t@ 0xffffff6e\n-\tsubeq\tr2, r1, lr, ror #19\n+\tsubeq\tr2, r1, r0, lsl #20\n+\tstrdeq\tr2, [r1], #-154\t@ 0xffffff66\n+\tstrdeq\tr2, [r1], #-150\t@ 0xffffff6a\n+\tsubeq\tr2, r1, r2, ror #19\n+\tldrdeq\tr2, [r1], #-158\t@ 0xffffff62\n \tldrdeq\tr2, [r1], #-154\t@ 0xffffff66\n-\tldrdeq\tr2, [r1], #-150\t@ 0xffffff6a\n-\tldrdeq\tr2, [r1], #-146\t@ 0xffffff6e\n+\tldrhteq\tr9, [lr], -lr\n \tldrhteq\tr9, [lr], -r6\n-\teorseq\tr9, lr, lr, lsr #17\n-\teorseq\tr9, lr, sl, lsr #17\n-\teorseq\tsp, pc, lr, asr #2\n-\teorseq\tsp, pc, sl, lsr r1\t@ \n-\teorseq\tr9, lr, lr, lsl #17\n+\tldrhteq\tr9, [lr], -r2\n+\teorseq\tsp, pc, r6, asr r1\t@ \n+\teorseq\tsp, pc, r2, asr #2\n+\tmlaseq\tlr, r6, r8, r9\n+\tsubeq\tr2, r1, sl, lsl #19\n+\tsubeq\tr2, r1, r6, lsl #19\n \tsubeq\tr2, r1, r2, lsl #19\n \tsubeq\tr2, r1, lr, ror r9\n \tsubeq\tr2, r1, sl, ror r9\n \tsubeq\tr2, r1, r6, ror r9\n-\tsubeq\tr2, r1, r2, ror r9\n-\tsubeq\tr2, r1, lr, ror #18\n+\tsubeq\tr2, r1, r8, ror #18\n+\tsubeq\tr2, r1, r4, ror #18\n \tsubeq\tr2, r1, r0, ror #18\n \tsubeq\tr2, r1, ip, asr r9\n \tsubeq\tr2, r1, r8, asr r9\n-\tsubeq\tr2, r1, r4, asr r9\n-\tsubeq\tr2, r1, r0, asr r9\n ./src/mira/preventinitfiasco.C:171\n \tbleq\tfe54d434 , std::allocator >@@Base+0xfe0a0698>\n \t\t\t@ instruction: 0xf1b94478\n \t\t\t@ instruction: 0xf8a5ffb9\n \t\t\t@ instruction: 0xf8df026c\n ./src/mira/preventinitfiasco.C:172\n \tldrbtmi\tr0, [r8], #-2956\t@ 0xfffff474\n@@ -4981,15 +4981,15 @@\n \tldrbtmi\tr4, [r9], #-1568\t@ 0xfffff9e0\n \tblx\t74d668 , std::allocator >@@Base+0x2a08cc>\n \tusatne\tpc, #24, pc, asr #17\t@ \n \tldrbtmi\tr4, [r9], #-1584\t@ 0xfffff9d0\n \tblx\t5cd674 , std::allocator >@@Base+0x1208d8>\n \tusatne\tpc, #16, pc, asr #17\t@ \n \tldrbtmi\tr4, [r9], #-1576\t@ 0xfffff9d8\n-\tblx\t44d680 , std::allocator >@@Base+0x45634>\n+\tblx\t44d680 , std::allocator >@@Base+0x4562c>\n \tusatne\tpc, #8, pc, asr #17\t@ \n \tldrtmi\tr4, [r2], -fp, lsr #12\n \t\t\t@ instruction: 0xf5014479\n \tstrtmi\tr7, [r1], -r5, rrx\n \tblx\t4c29c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x18564>\n /usr/include/c++/10/bits/basic_string.h:187\n \tstrbmi\tr6, [r8, #-2088]\t@ 0xfffff7d8\n@@ -5468,163 +5468,163 @@\n \t\t\t@ instruction: 0x4640499a\n \t\t\t@ instruction: 0xf7fe4479\n \tldmibmi\tr9, {r0, r1, r2, r4, r5, r8, r9, sl, fp, ip, sp, lr, pc}\n \tldrbtmi\tr4, [r9], #-1592\t@ 0xfffff9c8\n \tsvclt\t0x0000e130\n \tandhi\tpc, r0, pc, lsr #7\n \t...\n-\tsubeq\tr2, r1, r4, lsr r8\n-\tsubeq\tr2, r1, lr, lsr #16\n-\tsubeq\tr2, r1, r8, lsr #16\n-\tsubeq\tr2, r1, r2, lsr #16\n-\tsubeq\tr2, r1, ip, lsl r8\n-\tsubeq\tr2, r1, r6, lsl r8\n-\tsubeq\tr2, r1, r0, lsl r8\n-\tsubeq\tr2, r1, sl, lsl #16\n-\tsubeq\tr2, r1, r4, lsl #16\n-\tstrdeq\tr2, [r1], #-126\t@ 0xffffff82\n-\tstrdeq\tr2, [r1], #-120\t@ 0xffffff88\n-\tstrdeq\tr2, [r1], #-114\t@ 0xffffff8e\n-\tsubeq\tr2, r1, ip, ror #15\n-\tsubeq\tr2, r1, r6, ror #15\n-\tsubeq\tr2, r1, r0, ror #15\n-\tldrdeq\tr2, [r1], #-122\t@ 0xffffff86\n-\tsubeq\tr2, r1, r0, asr #15\n-\tstrheq\tr2, [r1], #-122\t@ 0xffffff86\n-\teorseq\tr9, lr, ip, lsl #13\n-\tsubeq\tr2, r1, lr, lsr #15\n-\tsubeq\tr2, r1, r8, lsr #15\n+\tsubeq\tr2, r1, ip, lsr r8\n+\tsubeq\tr2, r1, r6, lsr r8\n+\tsubeq\tr2, r1, r0, lsr r8\n+\tsubeq\tr2, r1, sl, lsr #16\n+\tsubeq\tr2, r1, r4, lsr #16\n+\tsubeq\tr2, r1, lr, lsl r8\n+\tsubeq\tr2, r1, r8, lsl r8\n+\tsubeq\tr2, r1, r2, lsl r8\n+\tsubeq\tr2, r1, ip, lsl #16\n+\tsubeq\tr2, r1, r6, lsl #16\n+\tsubeq\tr2, r1, r0, lsl #16\n+\tstrdeq\tr2, [r1], #-122\t@ 0xffffff86\n+\tstrdeq\tr2, [r1], #-116\t@ 0xffffff8c\n+\tsubeq\tr2, r1, lr, ror #15\n+\tsubeq\tr2, r1, r8, ror #15\n+\tsubeq\tr2, r1, r2, ror #15\n+\tsubeq\tr2, r1, r8, asr #15\n+\tsubeq\tr2, r1, r2, asr #15\n+\tmlaseq\tlr, r4, r6, r9\n+\tstrheq\tr2, [r1], #-118\t@ 0xffffff8a\n+\tstrheq\tr2, [r1], #-112\t@ 0xffffff90\n+\tsubeq\tr2, r1, r6, lsr #15\n+\tsubeq\tr2, r1, r0, lsr #15\n+\tumaaleq\tr2, r1, sl, r7\n+\tumaaleq\tr2, r1, ip, r7\n \tumaaleq\tr2, r1, lr, r7\n-\tumaaleq\tr2, r1, r8, r7\n-\tumaaleq\tr2, r1, r2, r7\n-\tumaaleq\tr2, r1, r4, r7\n-\tumaaleq\tr2, r1, r6, r7\n+\tsubeq\tr2, r1, r8, lsl #15\n+\teorseq\tr9, sp, lr, ror sl\n \tsubeq\tr2, r1, r0, lsl #15\n-\teorseq\tr9, sp, r2, ror sl\n-\tsubeq\tr2, r1, r8, ror r7\n-\tsubeq\tr2, r1, r2, ror r7\n-\tsubeq\tr2, r1, ip, ror #14\n-\tsubeq\tsl, r0, lr, lsr #4\n-\teorseq\tip, lr, r0, lsl r4\n+\tsubeq\tr2, r1, sl, ror r7\n+\tsubeq\tr2, r1, r4, ror r7\n+\tsubeq\tsl, r0, r6, lsr r2\n+\teorseq\tip, lr, r8, lsl r4\n \tsubeq\tr3, ip, r0, lsl #27\n-\tmlaseq\tlr, r0, r4, r9\n-\tldrhteq\tlr, [lr], -r8\n-\teorseq\tip, lr, r4, lsr #7\n+\tmlaseq\tlr, r8, r4, r9\n+\teorseq\tlr, lr, r0, asr #21\n+\teorseq\tip, lr, ip, lsr #7\n \tsubeq\tr3, ip, r4, lsl sp\n-\teorseq\tr9, lr, r6, lsr r4\n-\teorseq\tlr, lr, r6, asr sl\n-\teorseq\tip, lr, r2, asr #6\n+\teorseq\tr9, lr, lr, lsr r4\n+\teorseq\tlr, lr, lr, asr sl\n+\teorseq\tip, lr, sl, asr #6\n \tstrheq\tr3, [ip], #-196\t@ 0xffffff3c\n-\teorseq\tip, pc, r4, lsl #25\n-\tldrshteq\tlr, [lr], -r4\n-\teorseq\tip, lr, r0, ror #5\n+\teorseq\tip, pc, ip, lsl #25\n+\tldrshteq\tlr, [lr], -ip\n+\teorseq\tip, lr, r8, ror #5\n \tsubeq\tr3, ip, r2, asr ip\n-\teorseq\tip, pc, sl, lsl ip\t@ \n-\tmlaseq\tlr, r2, r9, lr\n-\teorseq\tip, lr, lr, ror r2\n+\teorseq\tip, pc, r2, lsr #24\n+\tmlaseq\tlr, sl, r9, lr\n+\teorseq\tip, lr, r6, lsl #5\n \tsubeq\tr3, ip, lr, ror #23\n-\teorseq\tr9, lr, r8, lsl r3\n-\teorseq\tlr, lr, r0, lsr r9\n-\teorseq\tip, lr, ip, lsl r2\n+\teorseq\tr9, lr, r0, lsr #6\n+\teorseq\tlr, lr, r8, lsr r9\n+\teorseq\tip, lr, r4, lsr #4\n \tsubeq\tr3, ip, lr, lsl #23\n-\tsubeq\tr2, r1, r2, lsl r3\n-\teorseq\tlr, lr, lr, asr #17\n-\tsubeq\tr2, r1, lr, ror #9\n+\tsubeq\tr2, r1, sl, lsl r3\n+\tldrsbteq\tlr, [lr], -r6\n+\tstrdeq\tr2, [r1], #-70\t@ 0xffffffba\n \tsubeq\tr3, ip, sl, lsr #22\n-\tsubeq\tr2, r1, r8, lsr #5\n-\teorseq\tlr, lr, ip, ror #16\n-\tsubeq\tr2, r1, ip, lsl #9\n+\tstrheq\tr2, [r1], #-32\t@ 0xffffffe0\n+\teorseq\tlr, lr, r4, ror r8\n+\tumaaleq\tr2, r1, r4, r4\n \tsubeq\tr3, ip, r8, asr #21\n-\tsubeq\tr2, r1, r6, asr r2\n-\teorseq\tlr, lr, sl, lsl #16\n-\tsubeq\tr2, r1, sl, lsr #8\n+\tsubeq\tr2, r1, lr, asr r2\n+\teorseq\tlr, lr, r2, lsl r8\n+\tsubeq\tr2, r1, r2, lsr r4\n \tsubeq\tr3, ip, r6, ror #20\n-\tsubeq\tr2, r1, r0, asr #5\n-\teorseq\tlr, lr, r8, lsr #15\n-\tmlaseq\tlr, r4, r0, ip\n+\tsubeq\tr2, r1, r8, asr #5\n+\tldrhteq\tlr, [lr], -r0\n+\tmlaseq\tlr, ip, r0, ip\n \tsubeq\tr3, ip, r6, lsl #20\n-\tsubeq\tr2, r1, r6, ror #4\n-\teorseq\tlr, lr, r6, asr #14\n-\teorseq\tip, lr, r2, lsr r0\n+\tsubeq\tr2, r1, lr, ror #4\n+\teorseq\tlr, lr, lr, asr #14\n+\teorseq\tip, lr, sl, lsr r0\n \tsubeq\tr3, ip, r4, lsr #19\n-\tsubeq\tr2, r1, r8, lsl r1\n-\teorseq\tlr, lr, r4, ror #13\n-\tldrsbteq\tfp, [lr], -r0\n+\tsubeq\tr2, r1, r0, lsr #2\n+\teorseq\tlr, lr, ip, ror #13\n+\tldrsbteq\tfp, [lr], -r8\n \tsubeq\tr3, ip, r0, asr #18\n-\tsubeq\tr2, r1, r2, asr #5\n-\teorseq\tlr, lr, r2, lsl #13\n-\teorseq\tfp, lr, lr, ror #30\n+\tsubeq\tr2, r1, sl, asr #5\n+\teorseq\tlr, lr, sl, lsl #13\n+\teorseq\tfp, lr, r6, ror pc\n \tsubeq\tr3, ip, r0, ror #17\n-\tsubeq\tr2, r1, r4, lsl r2\n-\teorseq\tlr, lr, r0, lsr #12\n-\teorseq\tfp, lr, ip, lsl #30\n+\tsubeq\tr2, r1, ip, lsl r2\n+\teorseq\tlr, lr, r8, lsr #12\n+\teorseq\tfp, lr, r4, lsl pc\n \tsubeq\tr3, ip, ip, ror r8\n \tsubeq\tr3, ip, r0, asr #16\n-\teorseq\tlr, lr, r6, asr #11\n-\tstrdeq\tr2, [r1], #-16\n-\tsubeq\tr2, r1, r6, lsl #4\n-\tsubeq\tr2, r1, r4, lsl r2\n-\tsubeq\tr2, r1, r6, lsr #4\n-\tsubeq\tr2, r1, r0, lsr r2\n-\tsubeq\tr2, r1, r6, lsr r2\n-\tsubeq\tr2, r1, ip, lsr r2\n-\tsubeq\tr2, r1, lr, asr #4\n-\tsubeq\tr2, r1, r8, ror #4\n+\teorseq\tlr, lr, lr, asr #11\n+\tstrdeq\tr2, [r1], #-24\t@ 0xffffffe8\n+\tsubeq\tr2, r1, lr, lsl #4\n+\tsubeq\tr2, r1, ip, lsl r2\n+\tsubeq\tr2, r1, lr, lsr #4\n+\tsubeq\tr2, r1, r8, lsr r2\n+\tsubeq\tr2, r1, lr, lsr r2\n+\tsubeq\tr2, r1, r4, asr #4\n+\tsubeq\tr2, r1, r6, asr r2\n+\tsubeq\tr2, r1, r0, ror r2\n \tsubeq\tr3, ip, lr, asr r7\n \tsubeq\tlr, r9, ip, lsr #14\n \tandeq\tr0, r0, r0, lsl #12\n-\tsubeq\tr2, r1, r4, lsr #3\n-\teorseq\tpc, lr, r8, asr #8\n+\tsubeq\tr2, r1, ip, lsr #3\n+\teorseq\tpc, lr, r0, asr r4\t@ \n+\tumaaleq\tr2, r1, ip, r1\n+\tumaaleq\tr2, r1, r8, r1\n \tumaaleq\tr2, r1, r4, r1\n \tumaaleq\tr2, r1, r0, r1\n \tsubeq\tr2, r1, ip, lsl #3\n \tsubeq\tr2, r1, r8, lsl #3\n \tsubeq\tr2, r1, r4, lsl #3\n-\tsubeq\tr2, r1, r0, lsl #3\n-\tsubeq\tr2, r1, ip, ror r1\n \tmuleq\tr0, r0, r6\n \tsubeq\tr3, ip, ip, lsr r6\n \tsubeq\tlr, r9, sl, lsl #12\n-\tsubeq\tr2, r1, sl, lsl r1\n-\teorseq\tpc, lr, r4, ror #6\n-\tsubeq\tr8, r0, lr, ror #16\n-\tsubeq\tr2, r1, r0, lsl #2\n-\tstrdeq\tr2, [r1], #-10\n-\tldrshteq\tfp, [sp], -ip\n-\tsubeq\tr2, r1, sl, ror #1\n-\tsubeq\tr2, r1, r4, ror #1\n-\tldrdeq\tr2, [r1], #-14\n+\tsubeq\tr2, r1, r2, lsr #2\n+\teorseq\tpc, lr, ip, ror #6\n+\tsubeq\tr8, r0, r6, ror r8\n+\tsubeq\tr2, r1, r8, lsl #2\n+\tsubeq\tr2, r1, r2, lsl #2\n+\teorseq\tfp, sp, r8, lsl #2\n+\tstrdeq\tr2, [r1], #-2\n+\tsubeq\tr2, r1, ip, ror #1\n+\tsubeq\tr2, r1, r6, ror #1\n \tsubeq\tr3, ip, r4, ror r5\n \tsubeq\tlr, r9, r6, asr #10\n-\tldrdeq\tr2, [r1], #-12\n-\tsubeq\tr2, r1, ip, lsr #1\n+\tsubeq\tr2, r1, r4, ror #1\n+\tstrheq\tr2, [r1], #-4\n+\tstrheq\tr2, [r1], #-6\n+\tstrheq\tr2, [r1], #-4\n \tsubeq\tr2, r1, lr, lsr #1\n \tsubeq\tr2, r1, ip, lsr #1\n-\tsubeq\tr2, r1, r6, lsr #1\n-\tsubeq\tr2, r1, r4, lsr #1\n-\tsubeq\tr2, r1, r6, lsr #1\n-\tsubeq\tr2, r1, r8\n+\tsubeq\tr2, r1, lr, lsr #1\n+\tsubeq\tr2, r1, r0, lsl r0\n \tldrdeq\tr3, [ip], #-68\t@ 0xffffffbc\n \tsubeq\tlr, r9, r4, lsr #9\n-\teorseq\tr5, pc, r4, lsl ip\t@ \n-\tsubeq\tr1, r1, r2, ror pc\n-\tsubeq\tr2, r1, ip, lsr r0\n-\teorseq\tsl, lr, r2, ror r8\n-\tsubeq\tr1, r1, ip, ror pc\n-\tsubeq\tr2, r1, r6, lsr #32\n-\tsubeq\tr2, r1, r4, lsr #32\n-\teorseq\tr8, pc, r6, lsl #7\n-\tsubeq\tr1, r1, r4, ror #30\n+\teorseq\tr5, pc, ip, lsl ip\t@ \n+\tsubeq\tr1, r1, sl, ror pc\n+\tsubeq\tr2, r1, r4, asr #32\n+\teorseq\tsl, lr, sl, ror r8\n+\tsubeq\tr1, r1, r4, lsl #31\n+\tsubeq\tr2, r1, lr, lsr #32\n+\tsubeq\tr2, r1, ip, lsr #32\n+\teorseq\tr8, pc, lr, lsl #7\n+\tsubeq\tr1, r1, ip, ror #30\n \tsubeq\tr3, ip, r0, lsr r4\n \tsubeq\tlr, r9, r0, lsl #8\n-\tsubeq\tr1, r1, r2, asr #31\n-\tsubeq\tr1, r1, r0, asr #31\n-\teorseq\tr5, pc, lr, asr fp\t@ \n-\tstrheq\tr1, [r1], #-244\t@ 0xffffff0c\n-\tstrheq\tr1, [r1], #-242\t@ 0xffffff0e\n+\tsubeq\tr1, r1, sl, asr #31\n+\tsubeq\tr1, r1, r8, asr #31\n+\teorseq\tr5, pc, r6, ror #22\n+\tstrheq\tr1, [r1], #-252\t@ 0xffffff04\n+\tstrheq\tr1, [r1], #-250\t@ 0xffffff06\n \tmcr2\t7, 0, pc, cr0, cr14, {7}\t@ \n \t\t\t@ instruction: 0x463049fe\n \t\t\t@ instruction: 0xf7fe4479\n \tldmibmi\tsp!, {r0, r1, r3, r4, r5, r6, r7, r8, sl, fp, ip, sp, lr, pc}^\n \tldrbtmi\tr9, [r9], #-2051\t@ 0xfffff7fd\n \tldc2l\t7, cr15, [r6, #1016]!\t@ 0x3f8\n \tmovwcs\tr9, #31240\t@ 0x7a08\n@@ -5996,32 +5996,32 @@\n \t\t\t@ instruction: 0xf43f42a8\n \tldmvs\tr1!, {r0, r1, r2, r4, r5, r6, r8, r9, sl, fp, sp, pc}\n /usr/include/c++/10/ext/new_allocator.h:133\n \t\t\t@ instruction: 0xf7fb3101\n \t\t\t@ instruction: 0xe771e952\n /usr/include/c++/10/bits/basic_string.h:237\n \tsvclt\t0x0000e7f4\n-\tsubeq\tr1, r1, r0, asr sp\n-\tsubeq\tr1, r1, r2, ror ip\n+\tsubeq\tr1, r1, r8, asr sp\n+\tsubeq\tr1, r1, sl, ror ip\n \tsubeq\tr3, ip, r2, asr #2\n \tsubeq\tlr, r9, r4, lsl r1\n \tandeq\tr0, r0, ip, lsl ip\n-\tstrheq\tr1, [r1], #-196\t@ 0xffffff3c\n-\tsubeq\tr9, r0, r6, lsr #10\n-\tsubeq\tr5, r0, r4, ror r9\n-\tumaaleq\tr1, r1, sl, ip\n-\tumaaleq\tr1, r1, r8, ip\n-\teorseq\tfp, lr, r8, lsr #14\n-\tsubeq\tr1, r1, sl, lsl #25\n-\tsubeq\tr1, r1, r8, lsl #25\n-\tsubeq\tr1, r1, r6, lsl #25\n-\tumaaleq\tr9, r0, r0, r5\n-\tsubeq\tr6, r0, r2, lsl r3\n-\tldrdeq\tr9, [r0], #-72\t@ 0xffffffb8\n-\tldrdeq\tr9, [r0], #-74\t@ 0xffffffb6\n+\tstrheq\tr1, [r1], #-204\t@ 0xffffff34\n+\tsubeq\tr9, r0, lr, lsr #10\n+\tsubeq\tr5, r0, ip, ror r9\n+\tsubeq\tr1, r1, r2, lsr #25\n+\tsubeq\tr1, r1, r0, lsr #25\n+\teorseq\tfp, lr, r0, lsr r7\n+\tumaaleq\tr1, r1, r2, ip\n+\tumaaleq\tr1, r1, r0, ip\n+\tsubeq\tr1, r1, lr, lsl #25\n+\tumaaleq\tr9, r0, r8, r5\n+\tsubeq\tr6, r0, sl, lsl r3\n+\tsubeq\tr9, r0, r0, ror #9\n+\tsubeq\tr9, r0, r2, ror #9\n \tsubeq\tr3, ip, ip, lsr #32\n \tstrdeq\tsp, [r9], #-252\t@ 0xffffff04\n \tldrdeq\tr0, [r0], -r0\t@ \n \tsubeq\tip, r9, sl, lsr pc\n \tandeq\tr1, r0, r0, lsr r0\n \tsubeq\tr2, ip, r6, ror pc\n \tsubeq\tr2, ip, sl, asr #29\n@@ -6132,15 +6132,15 @@\n \tsvclt\t0x0000ef66\n \tsubeq\tip, r9, ip, lsl ip\n \tldrdeq\tr0, [r0], -r0\t@ \n \tsubeq\tr3, ip, r4, lsr #3\n \tsubeq\tip, r9, sl, lsl #24\n \tandeq\tr0, r0, r0, ror #21\n \tumaaleq\tsp, r9, r2, ip\n-\tsubeq\tr3, r1, sl, lsr #2\n+\tsubeq\tr3, r1, r2, lsr r1\n \tsubeq\tr3, ip, r8, lsr #2\n \tsubeq\tip, r9, r2, lsl #23\n \tandeq\tr0, r0, ip, lsl ip\n \tsubeq\tsp, r9, sl, lsl #24\n _GLOBAL__sub_I__ZN10ReadPoolIOC2ER8ReadPool():\n ./src/mira/readpool_io.C:988\n \tcfstr32mi\tmvfx11, [r8], {56}\t@ 0x38\n@@ -6876,15 +6876,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tldc\t7, cr15, [r4], #1000\t@ 0x3e8\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrdeq\tpc, [r8, #-133]\t@ 0xffffff7b\n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n-\tbne\t459120 , std::allocator >@@Base+0x510d4>\n+\tbne\t459120 , std::allocator >@@Base+0x510cc>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tstc\t7, cr15, [ip], #1000\t@ 0x3e8\n /usr/include/c++/10/bits/stl_vector.h:680\n \tteqeq\tip, r5\t@ \t@ \n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n@@ -7235,15 +7235,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tb\tff9cef58 , std::allocator >@@Base+0xff5221bc>\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrdeq\tpc, [r8, #-133]\t@ 0xffffff7b\n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n-\tbne\t4594bc , std::allocator >@@Base+0x51470>\n+\tbne\t4594bc , std::allocator >@@Base+0x51468>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tb\tff7cef68 , std::allocator >@@Base+0xff3221cc>\n /usr/include/c++/10/bits/stl_vector.h:680\n \tteqeq\tip, r5\t@ \t@ \n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n@@ -7594,15 +7594,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tldmdb\tr8, {r1, r3, r4, r5, r6, r7, r8, r9, sl, ip, sp, lr, pc}\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrdeq\tpc, [r8, #-133]\t@ 0xffffff7b\n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n-\tbne\t459858 , std::allocator >@@Base+0x5180c>\n+\tbne\t459858 , std::allocator >@@Base+0x51804>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tldmdb\tr0, {r1, r3, r4, r5, r6, r7, r8, r9, sl, ip, sp, lr, pc}\n /usr/include/c++/10/bits/stl_vector.h:680\n \tteqeq\tip, r5\t@ \t@ \n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n@@ -8009,15 +8009,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tsvc\t0x0006f7f9\n /usr/include/c++/10/bits/stl_vector.h:680\n \tstreq\tpc, [r8, #2261]\t@ 0x8d5\n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n-\tbne\t45ad7c , std::allocator >@@Base+0x52d30>\n+\tbne\t45ad7c , std::allocator >@@Base+0x52d28>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tmrc\t7, 7, APSR_nzcv, cr14, cr9, {7}\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrbeq\tpc, [ip, #-2261]!\t@ 0xfffff72b\t@ \n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf8d5b120\n /usr/include/c++/10/bits/stl_vector.h:336\n@@ -8540,15 +8540,15 @@\n \t\t\t@ instruction: 0x4010e8bd\n ./src/progs/quirks.C:53\n \tmrclt\t7, 2, APSR_nzcv, cr10, cr9, {7}\n \tsubeq\tfp, r9, r2, asr r3\n \tldrdeq\tr0, [r0], -r0\t@ \n \tsubeq\tfp, r9, r6, asr #6\n \tsubeq\tfp, r9, r0, lsr #6\n-\tldrhteq\tr6, [pc], -ip\n+\teorseq\tr6, pc, r4, asr #25\n \teorseq\tr4, sp, r6, asr #15\n \tandeq\tr0, r0, r4, lsr #17\n \teorseq\tr4, sp, r2, asr #15\n \tsubeq\tfp, r9, r6, ror #5\n fixQuirks():\n ./src/progs/quirks.C:67\n \tandcs\tfp, r0, #16, 10\t@ 0x4000000\n@@ -8610,15 +8610,15 @@\n \tldcllt\t7, cr15, [r8, #996]!\t@ 0x3e4\n \tumaaleq\tfp, r9, r2, r2\n \tldrdeq\tr0, [r0], -r0\t@ \n \teorseq\tr4, sp, ip, lsl r7\n \teorseq\tr4, sp, r8, lsr #14\n \tsubeq\tfp, r9, r4, ror r2\n \tsubeq\tfp, r9, sl, asr r2\n-\tldrshteq\tr6, [pc], -r8\n+\teorseq\tr6, pc, r0, lsl #24\n \teorseq\tr4, sp, r2, lsl #14\n \tandeq\tr0, r0, r4, lsr #17\n \tldrshteq\tr4, [sp], -lr\n \tsubeq\tfp, r9, r2, lsr #4\n void std::__adjust_heap<__gnu_cxx::__normal_iterator > >, int, char, __gnu_cxx::__ops::_Iter_less_iter>(__gnu_cxx::__normal_iterator > >, int, int, char, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.0]:\n /usr/include/c++/10/bits/stl_heap.h:223\n \tldrbmi\tlr, [r0, sp, lsr #18]!\n@@ -9621,19 +9621,19 @@\n \tstmdbvs\tr3, {r5, sl, lr}^\n /usr/include/c++/10/bits/basic_ios.h:158\n \ttsteq\tr1, r3, asr #32\t@ \n \tbl\tad07d8 , std::allocator >@@Base+0x623a3c>\n \tsvclt\t0x0000e7e1\n \tldrdeq\tsl, [r9], #-112\t@ 0xffffff90\n \tandeq\tr0, r0, r4, lsr #17\n-\teorseq\tr3, sp, r8, asr #27\n+\tldrsbteq\tr3, [sp], -r4\n \t\t\t@ instruction: 0x00000bb8\n-\teorseq\tr3, lr, r8, lsl r8\n-\tldrhteq\tr3, [sp], -r0\n-\tldrshteq\tr3, [sp], -r0\n+\teorseq\tr3, lr, r0, lsr #16\n+\tldrhteq\tr3, [sp], -ip\n+\tldrshteq\tr3, [sp], -ip\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter) [clone .constprop.0]:\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tsvcmi\t0x00f0e92d\n \tstmib\tsp, {r0, r1, r2, r4, r7, ip, sp, pc}^\n \tbne\t2db448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x13d614>\n /usr/include/c++/10/bits/stl_algo.h:1949\n \tsvcvc\t0x00c0f5b3\n@@ -10143,21 +10143,21 @@\n \tvsqrt.f64\td20, d5\n \t\t\t@ instruction: 0xf57ffa10\n \t\t\t@ instruction: 0xe611ad70\n ./src/modules/mod_sigconex.C:62\n \tbleq\t24e41c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xb05e8>\n \tblne\t14e22c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xaa094>\n \tbleq\tff08e890 , std::allocator >@@Base+0xfebe1af4>\n-\tblx\t44e988 , std::allocator >@@Base+0x4693c>\n+\tblx\t44e988 , std::allocator >@@Base+0x46934>\n \ttstcs\tr1, ip, asr #30\n \tldrb\tr2, [fp, #256]!\t@ 0x100\n \tblcs\tce438 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2a2a0>\n \tblcc\t14e244 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xaa0ac>\n \tblcs\tff10e8a8 , std::allocator >@@Base+0xfec61b0c>\n-\tblx\t44e9a0 , std::allocator >@@Base+0x46954>\n+\tblx\t44e9a0 , std::allocator >@@Base+0x4694c>\n \tandcs\tfp, r1, #76, 30\t@ 0x130\n \tldrb\tr2, [r6, #512]!\t@ 0x200\n \tstrls\tr4, [sl, #-1623]\t@ 0xfffff9a9\n \tldmdage\tr0, {r3, r4, r6, r7, r9, sl, sp, lr, pc}\n /usr/include/c++/10/bits/stl_algo.h:1951\n \tandls\tr4, r9, sp, lsl #12\n \tsvclt\t0x0000e60c\n@@ -10583,15 +10583,15 @@\n /usr/include/c++/10/bits/stl_vector.h:113\n \tadcvs\tr1, r1, r4, lsl #24\n /usr/include/c++/10/bits/stl_vector.h:112\n \tstrvs\tlr, [r3], -r5, asr #18\n /usr/include/c++/10/bits/stl_vector.h:113\n \tstcvs\t8, cr15, [r4], {69}\t@ 0x45\n /usr/include/c++/10/bits/stl_vector.h:353\n-\tbne\t47f728 , std::allocator >@@Base+0x776dc>\n+\tbne\t47f728 , std::allocator >@@Base+0x776d4>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tstmdb\tr8!, {r3, r4, r5, r6, r7, r8, r9, sl, ip, sp, lr, pc}\n /usr/include/c++/10/bits/regex_executor.tcc:130\n \tldcvc\t8, cr15, [r0], {85}\t@ 0x55\n /usr/include/c++/10/bits/unique_ptr.h:660\n \t\t\t@ instruction: 0xf8106be0\n /usr/include/c++/10/bits/regex_executor.h:200\n@@ -10656,15 +10656,15 @@\n /usr/include/c++/10/bits/stl_construct.h:151\n \trscvs\tr4, r7, r5, asr r5\n \tstmdavs\tr8!, {r2, r3, ip, lr, pc}^\n /usr/include/c++/10/bits/stl_vector.h:353\n \t\t\t@ instruction: 0xf0002800\n \tstmiavs\tsl!, {r2, r5, r8, pc}^\n /usr/include/c++/10/bits/stl_construct.h:151\n-\tbne\t4607e8 , std::allocator >@@Base+0x5879c>\n+\tbne\t4607e8 , std::allocator >@@Base+0x58794>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tstmia\tr8, {r3, r4, r5, r6, r7, r8, r9, sl, ip, sp, lr, pc}^\n /usr/include/c++/10/bits/stl_construct.h:151\n \tmvnsle\tr4, r5, asr r5\n /usr/include/c++/10/bits/stl_vector.h:335\n \tldrsbtge\tpc, [ip], -sp\t@ \n /usr/include/c++/10/bits/stl_vector.h:353\n@@ -10805,15 +10805,15 @@\n \tsvcge\t0x001df57f\n /usr/include/c++/10/bits/regex_executor.tcc:127\n \t\t\t@ instruction: 0xf47f45a9\n \tstmdbls\tr0, {r4, r8, r9, sl, fp, sp, pc}\n /usr/include/c++/10/bits/regex_executor.tcc:133\n \tumaalvs\tpc, r8, r4, r8\t@ \n /usr/include/c++/10/bits/stl_vector.h:680\n-\tbpl\t40dcb4 , std::allocator >@@Base+0x5c68>\n+\tbpl\t40dcb4 , std::allocator >@@Base+0x5c60>\n /usr/include/c++/10/bits/regex_executor.tcc:133\n \ttstls\tr0, r1, lsr r3\n /usr/include/c++/10/bits/stl_construct.h:151\n \tandle\tr4, ip, r5, asr r5\n /usr/include/c++/10/bits/stl_vector.h:680\n \tstmdacs\tr0, {r3, r5, r6, fp, sp, lr}\n /usr/include/c++/10/bits/stl_vector.h:353\n@@ -11162,15 +11162,15 @@\n ./src/modules/mod_sigconex.C:101\n \tmlaeq\tr4, sp, r8, pc\t@ \n /usr/include/c++/10/bits/basic_string.h:157\n \tblvc\tfe950ce0 , std::allocator >@@Base+0xfe4a3f44>\n ./src/modules/mod_sigconex.C:101\n \tandeq\tpc, r0, sp, lsl #17\n \tstrls\tr4, [r1], #-1611\t@ 0xfffff9b5\n-\tbeq\t44f11c , std::allocator >@@Base+0x470d0>\n+\tbeq\t44f11c , std::allocator >@@Base+0x470c8>\n \t\t\t@ instruction: 0xf8c94629\n /usr/include/c++/10/bits/basic_string.h:183\n \t\t\t@ instruction: 0xf8894004\n /usr/include/c++/10/bits/char_traits.h:329\n \t\t\t@ instruction: 0xf8c94008\n /usr/include/c++/10/bits/basic_string.h:157\n \tvhadd.u\td27, d8, d0\n@@ -11181,15 +11181,15 @@\n /usr/include/c++/10/bits/basic_string.h:231\n \t\t\t@ instruction: 0xf8d9d004\n /usr/include/c++/10/bits/basic_string.h:237\n \ttstcc\tr1, r8\n /usr/include/c++/10/ext/new_allocator.h:133\n \tmrc\t7, 1, APSR_nzcv, cr0, cr7, {7}\n ./src/modules/mod_sigconex.C:102\n-\tbeq\t44f144 , std::allocator >@@Base+0x470f8>\n+\tbeq\t44f144 , std::allocator >@@Base+0x470f0>\n \trscscc\tpc, pc, #79\t@ 0x4f\n \tmvnscc\tpc, #79\t@ 0x4f\n \tblhi\tcef20 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2ad88>\n \tblhi\t4ef24 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1b1ec>\n \tldc2\t3, cr15, [r0, #-492]\t@ 0xfffffe14\n /usr/include/c++/10/bits/basic_string.h:187\n \tbls\t1ed9d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4fba4>\n@@ -11356,15 +11356,15 @@\n \tldrbmi\tr7, [r0, #-3830]!\t@ 0xfffff10a\n \t\t\t@ instruction: 0xf8d9d004\n /usr/include/c++/10/bits/basic_string.h:237\n \tsmlatbcc\tr1, ip, r0, r1\n /usr/include/c++/10/ext/new_allocator.h:133\n \tldc\t7, cr15, [r0, #-988]!\t@ 0xfffffc24\n /usr/include/c++/10/bits/regex.h:507\n-\tbeq\t44f340 , std::allocator >@@Base+0x472f4>\n+\tbeq\t44f340 , std::allocator >@@Base+0x472ec>\n /usr/include/c++/10/bits/stl_vector.h:1769\n \tldrbpl\tpc, [r4], #-581\t@ 0xfffffdbb\t@ \n \tldrbpl\tpc, [r5], #-705\t@ 0xfffffd3f\t@ \n /usr/include/c++/10/bits/regex.h:507\n \tldm\tr4!, {r3, r4, r5, r6, r7, r8, r9, sl, ip, sp, lr, pc}^\n /usr/include/c++/10/bits/stl_vector.h:919\n \tstrcs\tr9, [r0], -ip, lsl #16\n@@ -11402,16 +11402,16 @@\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xffffffff\n \tsubeq\tr9, r9, r0, ror r8\n \tsubeq\tr9, r9, sl, ror #16\n \tldrdeq\tr0, [r0], -r0\t@ \n \tandeq\tr0, r0, r8, ror #16\n \tandeq\tr0, r0, r4, lsr #17\n-\teorseq\tr2, sp, ip, asr #27\n-\teorseq\tr2, sp, ip, lsl #25\n+\tldrsbteq\tr2, [sp], -r8\n+\tmlaseq\tsp, r8, ip, r2\n \t\t\t@ instruction: 0x00000cb8\n \tstrcs\tr4, [r0, -r2, asr #13]\n \tandcs\tsl, r1, r4, asr #24\n ./src/modules/mod_sigconex.C:105\n \tldmdbge\tr2, {r1, r2, r6, r8, r9, fp, sp, pc}^\n \tmovwls\tr9, #20489\t@ 0x5009\n /usr/include/c++/10/bits/basic_string.h:160\n@@ -11553,67 +11553,67 @@\n \tandle\tr2, sl, r6, lsl #20\n ./src/modules/mod_sigconex.C:137\n \tblvs\tcf354 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b1bc>\n /usr/include/c++/10/bits/stl_iterator.h:1005\n \ttsteq\tr8, r8, lsl #2\t@ \n ./src/modules/mod_sigconex.C:137\n \tblvs\tff20f7cc , std::allocator >@@Base+0xfed62a30>\n-\tblx\t44f8c4 , std::allocator >@@Base+0x47878>\n+\tblx\t44f8c4 , std::allocator >@@Base+0x47870>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf888bfa8\n \tldc\t0, cr6, [r1, #64]\t@ 0x40\n ./src/modules/mod_sigconex.C:137\n \ttstcc\tr8, r2, lsl #22\n \tbleq\tff20f7e0 , std::allocator >@@Base+0xfed62a44>\n-\tblx\t44f8d8 , std::allocator >@@Base+0x4788c>\n+\tblx\t44f8d8 , std::allocator >@@Base+0x47884>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf801bfa8\n \tldc\t12, cr6, [r1, #32]\n ./src/modules/mod_sigconex.C:137\n \ttstcc\tr8, r2, lsl #22\n \tblne\tff20f7f4 , std::allocator >@@Base+0xfed62a58>\n-\tblx\t44f8ec , std::allocator >@@Base+0x478a0>\n+\tblx\t44f8ec , std::allocator >@@Base+0x47898>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf801bfa8\n \tldc\t12, cr6, [r1, #32]\n ./src/modules/mod_sigconex.C:137\n \ttstcc\tr8, r2, lsl #22\n \tblcs\tff20f808 , std::allocator >@@Base+0xfed62a6c>\n-\tblx\t44f900 , std::allocator >@@Base+0x478b4>\n+\tblx\t44f900 , std::allocator >@@Base+0x478ac>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf801bfa8\n \tldc\t12, cr6, [r1, #32]\n ./src/modules/mod_sigconex.C:137\n \ttstcc\tr8, r2, lsl #22\n \tblcc\tff20f81c , std::allocator >@@Base+0xfed62a80>\n-\tblx\t44f914 , std::allocator >@@Base+0x478c8>\n+\tblx\t44f914 , std::allocator >@@Base+0x478c0>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf801bfa8\n \tldc\t12, cr6, [r1, #32]\n ./src/modules/mod_sigconex.C:137\n \ttstcc\tr8, r2, lsl #22\n \tblmi\tff20f830 , std::allocator >@@Base+0xfed62a94>\n-\tblx\t44f928 , std::allocator >@@Base+0x478dc>\n+\tblx\t44f928 , std::allocator >@@Base+0x478d4>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf801bfa8\n \tldc\t12, cr6, [r1, #32]\n ./src/modules/mod_sigconex.C:137\n \ttstcc\tr8, r2, lsl #22\n \tblpl\tff20f844 , std::allocator >@@Base+0xfed62aa8>\n-\tblx\t44f93c , std::allocator >@@Base+0x478f0>\n+\tblx\t44f93c , std::allocator >@@Base+0x478e8>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf801bfa8\n \tldrbmi\tr6, [r9, #-3080]\t@ 0xfffff3f8\n ./src/modules/mod_sigconex.C:136\n \tldc\t0, cr13, [r1, #296]\t@ 0x128\n ./src/modules/mod_sigconex.C:137\n \ttstcc\tr8, r2, lsl #22\n \tbleq\tcf3d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b238>\n \tblvs\tff20f860 , std::allocator >@@Base+0xfed62ac4>\n-\tblx\t44f958 , std::allocator >@@Base+0x4790c>\n+\tblx\t44f958 , std::allocator >@@Base+0x47904>\n \tbleq\tff20f868 , std::allocator >@@Base+0xfed62acc>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf801bfa8\n \tcdp\t12, 15, cr6, cr1, cr8, {0}\n ./src/modules/mod_sigconex.C:137\n \tvldr\ts30, [r1, #64]\t@ 0x40\n \tvldr\td1, [r1, #32]\n@@ -11627,37 +11627,37 @@\n \tvldr\td5, [r1, #128]\t@ 0x80\n \t\t\t@ instruction: 0xeef16b26\n \tmrc\t10, 5, APSR_nzcv, cr4, cr0, {0}\n \tsvclt\t0x00a82bc7\n ./src/modules/mod_sigconex.C:139\n \teorvs\tpc, r8, r1, lsl #17\n ./src/modules/mod_sigconex.C:137\n-\tblx\t44f998 , std::allocator >@@Base+0x4794c>\n+\tblx\t44f998 , std::allocator >@@Base+0x47944>\n \tblcc\tff20f8a8 , std::allocator >@@Base+0xfed62b0c>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf881bfa8\n \tcdp\t0, 15, cr6, cr1, cr0, {2}\n ./src/modules/mod_sigconex.C:137\n \tmrc\t10, 5, APSR_nzcv, cr4, cr0, {0}\n \tsvclt\t0x00a84bc7\n ./src/modules/mod_sigconex.C:139\n \tsubsvs\tpc, r8, r1, lsl #17\n ./src/modules/mod_sigconex.C:137\n-\tblx\t44f9b4 , std::allocator >@@Base+0x47968>\n+\tblx\t44f9b4 , std::allocator >@@Base+0x47960>\n \tblpl\tff20f8c4 , std::allocator >@@Base+0xfed62b28>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf881bfa8\n \tmrc\t0, 7, r6, cr1, cr0, {3}\n ./src/modules/mod_sigconex.C:137\n \tmrc\t10, 5, APSR_nzcv, cr4, cr0, {0}\n \tsvclt\t0x00a86bc7\n ./src/modules/mod_sigconex.C:139\n \taddvs\tpc, r8, r1, lsl #17\n ./src/modules/mod_sigconex.C:137\n-\tblx\t44f9d0 , std::allocator >@@Base+0x47984>\n+\tblx\t44f9d0 , std::allocator >@@Base+0x4797c>\n ./src/modules/mod_sigconex.C:139\n \t\t\t@ instruction: 0xf881bfa8\n \t\t\t@ instruction: 0x31a860a0\n ./src/modules/mod_sigconex.C:136\n \t\t\t@ instruction: 0xd1b44559\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tstreq\tlr, [r8, -fp, lsr #23]\n@@ -11719,60 +11719,60 @@\n \tandspl\tpc, r0, r8, lsl #17\n /usr/include/c++/10/bits/stl_iterator.h:1005\n \ttsteq\tr8, #8, 2\t@ \n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tr4, {r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblne\tcf518 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b380>\n \tblne\tff20f9a0 , std::allocator >@@Base+0xfed62c04>\n-\tblx\t44fa98 , std::allocator >@@Base+0x47a4c>\n+\tblx\t44fa98 , std::allocator >@@Base+0x47a44>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:151\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tr4, {r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblcs\tcf534 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b39c>\n \tblcs\tff20f9bc , std::allocator >@@Base+0xfed62c20>\n-\tblx\t44fab4 , std::allocator >@@Base+0x47a68>\n+\tblx\t44fab4 , std::allocator >@@Base+0x47a60>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:151\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tr4, {r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblcc\tcf550 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b3b8>\n \tblcc\tff20f9d8 , std::allocator >@@Base+0xfed62c3c>\n-\tblx\t44fad0 , std::allocator >@@Base+0x47a84>\n+\tblx\t44fad0 , std::allocator >@@Base+0x47a7c>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:151\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tr4, {r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblmi\tcf56c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b3d4>\n \tblmi\tff20f9f4 , std::allocator >@@Base+0xfed62c58>\n-\tblx\t44faec , std::allocator >@@Base+0x47aa0>\n+\tblx\t44faec , std::allocator >@@Base+0x47a98>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:151\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tr4, {r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblpl\tcf588 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b3f0>\n \tblpl\tff20fa10 , std::allocator >@@Base+0xfed62c74>\n-\tblx\t44fb08 , std::allocator >@@Base+0x47abc>\n+\tblx\t44fb08 , std::allocator >@@Base+0x47ab4>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:151\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tr4, {r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblvs\tcf5a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b40c>\n \tblvs\tff20fa2c , std::allocator >@@Base+0xfed62c90>\n-\tblx\t44fb24 , std::allocator >@@Base+0x47ad8>\n+\tblx\t44fb24 , std::allocator >@@Base+0x47ad0>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:151\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:148\n \t\t\t@ instruction: 0xf000455b\n \tand\tr8, r7, r5, lsl #1\n@@ -11794,24 +11794,24 @@\n ./src/modules/mod_sigconex.C:149 (discriminator 3)\n \tmlavs\tr8, r3, r8, pc\t@ \n /usr/include/c++/10/bits/stl_iterator.h:1005 (discriminator 3)\n \tldmdblt\tr6, {r3, r4, r8, r9, ip, sp}^\n ./src/modules/mod_sigconex.C:149\n \tblne\tcf5f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b460>\n \tblne\tff20fa80 , std::allocator >@@Base+0xfed62ce4>\n-\tblx\t44fb78 , std::allocator >@@Base+0x47b2c>\n+\tblx\t44fb78 , std::allocator >@@Base+0x47b24>\n \tldmdavs\tr9, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284291\n ./src/modules/mod_sigconex.C:151\n \t\t\t@ instruction: 0xf893741d\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tip, {r3, r5, lr}^\n \tblcs\t24f614 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xb17e0>\n \tblcs\tff20fa9c , std::allocator >@@Base+0xfed62d00>\n-\tblx\t44fb94 , std::allocator >@@Base+0x47b48>\n+\tblx\t44fb94 , std::allocator >@@Base+0x47b40>\n \tldmibvs\tlr, {r2, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:151\n \teorpl\tpc, r8, r3, lsl #17\n ./src/modules/mod_sigconex.C:149\n \tumaalne\tpc, r0, r3, r8\t@ \n \tvldr.16\ts22, [r3, #178]\t@ 0xb2\n@@ -11822,15 +11822,15 @@\n ./src/modules/mod_sigconex.C:151\n \t\t\t@ instruction: 0xf883bf28\n \t\t\t@ instruction: 0xf8935040\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tlr, {r3, r4, r6, sp, lr}^\n \tblmi\t54f650 , std::allocator >@@Base+0xa28b4>\n \tblmi\tff20fad8 , std::allocator >@@Base+0xfed62d3c>\n-\tblx\t44fbd0 , std::allocator >@@Base+0x47b84>\n+\tblx\t44fbd0 , std::allocator >@@Base+0x47b7c>\n \tvldmiavs\tr9, {d29-d30}\n \tsvclt\t0x00284291\n ./src/modules/mod_sigconex.C:151\n \tsubspl\tpc, r8, r3, lsl #17\n ./src/modules/mod_sigconex.C:149\n \t\t\t@ instruction: 0x4070f893\n \tvldr.16\ts22, [r3, #184]\t@ 0xb8\n@@ -11841,15 +11841,15 @@\n ./src/modules/mod_sigconex.C:151\n \t\t\t@ instruction: 0xf883bf28\n \t\t\t@ instruction: 0xf8935070\n ./src/modules/mod_sigconex.C:149\n \tldmdblt\tr9, {r3, r7, ip}^\n \tblvs\t84f68c , std::allocator >@@Base+0x3a28f0>\n \tblvs\tff20fb14 , std::allocator >@@Base+0xfed62d78>\n-\tblx\t44fc0c , std::allocator >@@Base+0x47bc0>\n+\tblx\t44fc0c , std::allocator >@@Base+0x47bb8>\n \tsvcvs\t0x00dcdb04\n \tsvclt\t0x00284294\n ./src/modules/mod_sigconex.C:151\n \taddpl\tpc, r8, r3, lsl #17\n ./src/modules/mod_sigconex.C:149\n \tumlalvs\tpc, r0, r3, r8\t@ \n \tvldr.16\ts22, [r3, #204]\t@ 0xcc\n@@ -11903,72 +11903,72 @@\n \tandspl\tpc, r0, r8, lsl #17\n /usr/include/c++/10/bits/stl_iterator.h:1005\n \ttsteq\tr8, #8, 2\t@ \n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr1, {r0, r3, r4, sl, fp, ip, sp, lr}^\n \tblcs\tcf74c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b5b4>\n \tblcs\tff20fbd4 , std::allocator >@@Base+0xfed62e38>\n-\tblx\t44fccc , std::allocator >@@Base+0x47c80>\n+\tblx\t44fccc , std::allocator >@@Base+0x47c78>\n \tldmdavs\tpc, {r0, r1, r8, r9, fp, ip, lr, pc}^\t@ \n \tsvclt\t0x00284297\n ./src/modules/mod_sigconex.C:163\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr6, {r1, r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblcc\tcf768 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b5d0>\n \tblcc\tff20fbf0 , std::allocator >@@Base+0xfed62e54>\n-\tblx\t44fce8 , std::allocator >@@Base+0x47c9c>\n+\tblx\t44fce8 , std::allocator >@@Base+0x47c94>\n \tldmdavs\tr9, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284291\n ./src/modules/mod_sigconex.C:163\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr7, {r0, r1, r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblmi\tcf784 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b5ec>\n \tblmi\tff20fc0c , std::allocator >@@Base+0xfed62e70>\n-\tblx\t44fd04 , std::allocator >@@Base+0x47cb8>\n+\tblx\t44fd04 , std::allocator >@@Base+0x47cb0>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:163\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr1, {r0, r3, r4, sl, fp, ip, sp, lr}^\n \tblpl\tcf7a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b608>\n \tblpl\tff20fc28 , std::allocator >@@Base+0xfed62e8c>\n-\tblx\t44fd20 , std::allocator >@@Base+0x47cd4>\n+\tblx\t44fd20 , std::allocator >@@Base+0x47ccc>\n \tldmdavs\tpc, {r0, r1, r8, r9, fp, ip, lr, pc}^\t@ \n \tsvclt\t0x00284297\n ./src/modules/mod_sigconex.C:163\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr6, {r1, r2, r3, r4, sl, fp, ip, sp, lr}^\n \tblvs\tcf7bc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b624>\n \tblvs\tff20fc44 , std::allocator >@@Base+0xfed62ea8>\n-\tblx\t44fd3c , std::allocator >@@Base+0x47cf0>\n+\tblx\t44fd3c , std::allocator >@@Base+0x47ce8>\n \tldmdavs\tr9, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284291\n ./src/modules/mod_sigconex.C:163\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr7, {r0, r1, r2, r3, r4, sl, fp, ip, sp, lr}^\n \tbleq\tcf7d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b640>\n \tbleq\tff20fc60 , std::allocator >@@Base+0xfed62ec4>\n-\tblx\t44fd58 , std::allocator >@@Base+0x47d0c>\n+\tblx\t44fd58 , std::allocator >@@Base+0x47d04>\n \tldmdavs\tlr, {r0, r1, r8, r9, fp, ip, lr, pc}^\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:163\n \ttstcc\tr8, #486539264\t@ 0x1d000000\n ./src/modules/mod_sigconex.C:160\n \trsbsle\tr4, r9, fp, asr r5\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr1, {r0, r3, r4, sl, fp, ip, sp, lr}^\n ./src/modules/mod_sigconex.C:161 (discriminator 1)\n \tblne\tcf7f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b660>\n \tblne\tff20fc80 , std::allocator >@@Base+0xfed62ee4>\n-\tblx\t44fd78 , std::allocator >@@Base+0x47d2c>\n+\tblx\t44fd78 , std::allocator >@@Base+0x47d24>\n \tldmdavs\tpc, {r0, r1, r8, r9, fp, ip, lr, pc}^\t@ \n ./src/modules/mod_sigconex.C:161 (discriminator 2)\n \tsvclt\t0x00284297\n ./src/modules/mod_sigconex.C:163 (discriminator 2)\n \t\t\t@ instruction: 0xf893741d\n ./src/modules/mod_sigconex.C:161 (discriminator 3)\n \ttstcc\tr8, #40\t@ 0x28\n@@ -11990,15 +11990,15 @@\n ./src/modules/mod_sigconex.C:163\n \t\t\t@ instruction: 0xf883bf28\n \t\t\t@ instruction: 0xf8935028\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tr9, {r6, ip}^\n \tblmi\t3cf850 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd2b8>\n \tblmi\tff20fcd8 , std::allocator >@@Base+0xfed62f3c>\n-\tblx\t44fdd0 , std::allocator >@@Base+0x47d84>\n+\tblx\t44fdd0 , std::allocator >@@Base+0x47d7c>\n \tblvs\t180ae20 , std::allocator >@@Base+0x135e084>\n \tsvclt\t0x00284297\n ./src/modules/mod_sigconex.C:163\n \tsubpl\tpc, r0, r3, lsl #17\n ./src/modules/mod_sigconex.C:161\n \t\t\t@ instruction: 0x6058f893\n \tvldr.16\ts22, [r3, #188]\t@ 0xbc\n@@ -12009,15 +12009,15 @@\n ./src/modules/mod_sigconex.C:163\n \t\t\t@ instruction: 0xf883bf28\n \t\t\t@ instruction: 0xf8935058\n ./src/modules/mod_sigconex.C:161\n \tldmdblt\tpc, {r4, r5, r6, ip, sp, lr}^\t@ \n \tblvs\t6cf88c , std::allocator >@@Base+0x222af0>\n \tblvs\tff20fd14 , std::allocator >@@Base+0xfed62f78>\n-\tblx\t44fe0c , std::allocator >@@Base+0x47dc0>\n+\tblx\t44fe0c , std::allocator >@@Base+0x47db8>\n \tvnmlsvs.f64\td29, d14, d4\n \tsvclt\t0x00284296\n ./src/modules/mod_sigconex.C:163\n \trsbspl\tpc, r0, r3, lsl #17\n ./src/modules/mod_sigconex.C:161\n \tumullne\tpc, r8, r3, r8\t@ \n \tvldr.16\ts22, [r3, #178]\t@ 0xb2\n@@ -12028,15 +12028,15 @@\n ./src/modules/mod_sigconex.C:163\n \t\t\t@ instruction: 0xf883bf28\n \t\t\t@ instruction: 0xf8935088\n ./src/modules/mod_sigconex.C:161\n \tstmdblt\tr6!, {r5, r7, sp, lr}^\n \tblne\t9cf8c8 , std::allocator >@@Base+0x522b2c>\n \tblne\tff20fd50 , std::allocator >@@Base+0xfed62fb4>\n-\tblx\t44fe48 , std::allocator >@@Base+0x47dfc>\n+\tblx\t44fe48 , std::allocator >@@Base+0x47df4>\n \t\t\t@ instruction: 0xf8d3db05\n \taddsmi\tr1, r1, #148\t@ 0x94\n ./src/modules/mod_sigconex.C:163\n \t\t\t@ instruction: 0xf883bf28\n \t\t\t@ instruction: 0x33a850a0\n ./src/modules/mod_sigconex.C:160\n \torrle\tr4, r5, fp, asr r5\n@@ -12273,15 +12273,15 @@\n \tldrdeq\tlr, [r0, -r4]\n ./src/modules/mod_sigconex.C:120\n \tsuble\tr2, lr, r0, lsl #18\n /usr/include/c++/10/bits/regex.h:2337\n \tblls\t21dd1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7fee8>\n \tcfmsub32\tmvax0, mvfx9, mvfx8, mvfx0\n \tstrmi\tr2, [r1], #-2576\t@ 0xfffff5f0\n-\tbvs\t44fd88 , std::allocator >@@Base+0x47d3c>\n+\tbvs\t44fd88 , std::allocator >@@Base+0x47d34>\n \tldc2\t0, cr15, [ip], #28\n ./src/modules/mod_sigconex.C:121\n \tsubsle\tr2, r6, r0, lsl #16\n /usr/include/c++/10/bits/stl_iterator.h:979\n \tldmdavs\tr2!, {r0, r2, r4, r5, fp, sp, lr}^\n /usr/include/c++/10/bits/stl_vector.h:919\n \taddsmi\tr1, r5, #84992\t@ 0x14c00\n@@ -12729,15 +12729,15 @@\n \t\t\t@ instruction: 0xf1b8d123\n /usr/include/c++/10/bits/stl_vector.h:353\n \tandle\tr0, r3, r0, lsl #30\n /usr/include/c++/10/ext/new_allocator.h:133\n \t\t\t@ instruction: 0x46404639\n \tldc\t7, cr15, [r2, #984]\t@ 0x3d8\n /usr/include/c++/10/bits/stl_vector.h:680\n-\tbhi\t45027c , std::allocator >@@Base+0x48230>\n+\tbhi\t45027c , std::allocator >@@Base+0x48228>\n \tldrdeq\tpc, [r0], -r8\n /usr/include/c++/10/bits/stl_vector.h:336\n \tldrdmi\tpc, [r8], -r8\n \ttstlt\tr8, r1, lsr #20\n /usr/include/c++/10/ext/new_allocator.h:133\n \tstc\t7, cr15, [r8, #984]\t@ 0x3d8\n ./src/modules/mod_sigconex.C:106\n@@ -12807,33 +12807,33 @@\n \t...\n \t\t\t@ instruction: 0x00000cb8\n \tsubeq\tr8, r9, r8, lsr #22\n \tldrdeq\tr0, [r0], -r0\t@ \n \teorseq\tr1, sp, r6, ror r9\n \tandeq\tr1, r0, r8, ror r0\n \tandeq\tr0, r0, r4, asr ip\n-\tldrshteq\tr1, [sp], -ip\n+\teorseq\tr2, sp, r8\n \tandeq\tr0, r0, r8, asr lr\n \tandeq\tr0, r0, r8, lsr fp\n \tandeq\tr0, r0, r4, lsl r8\n \tandeq\tr0, r0, ip, asr sp\n \tandeq\tr0, r0, ip, asr r7\n-\teorseq\tr2, sp, r0, lsl #7\n-\teorseq\tr2, sp, ip, ror r3\n+\teorseq\tr2, sp, ip, lsl #7\n+\teorseq\tr2, sp, r8, lsl #7\n \tandeq\tr0, r0, r4, ror #31\n \tandeq\tr0, r0, r4, lsl #30\n \tandeq\tr0, r0, r0, lsl #25\n \tandeq\tr0, r0, r4, ror #23\n-\tldrhteq\tr2, [sp], -r0\n+\tldrhteq\tr2, [sp], -ip\n \tldrdeq\tr0, [r0], -r8\n-\teorseq\tr8, lr, r0, lsl r8\n-\tldrshteq\tr1, [sp], -r2\n-\teorseq\tr1, sp, ip, lsr #24\n-\teorseq\tr1, sp, r2, ror ip\n-\teorseq\tr1, sp, r0, lsl ip\n+\teorseq\tr8, lr, r8, lsl r8\n+\tldrshteq\tr1, [sp], -lr\n+\teorseq\tr1, sp, r8, lsr ip\n+\teorseq\tr1, sp, lr, ror ip\n+\teorseq\tr1, sp, ip, lsl ip\n /usr/include/c++/10/bits/stl_construct.h:140\n \t\t\t@ instruction: 0xf60b4658\n /usr/include/c++/10/bits/stl_construct.h:151\n \tvqrdmlah.s32\t, , q4\n /usr/include/c++/10/bits/stl_construct.h:140\n \tldr\tpc, [r6, r9, lsl #16]!\n /usr/include/c++/10/bits/basic_string.h:187\n@@ -13118,30 +13118,30 @@\n \tsvc\t0x0036f7f6\n ./src/modules/mod_sigconex.C:246\n \tldc\t7, cr15, [ip, #984]\t@ 0x3d8\n \tsvc\t0x0032f7f6\n \tsubeq\tr8, r9, r8, ror #6\n \tldrdeq\tr0, [r0], -r0\t@ \n \tsubeq\tr9, r9, r0, lsl #12\n-\teorseq\tr1, sp, r6, asr #20\n+\teorseq\tr1, sp, r2, asr sl\n \tsubeq\tr8, r9, r2, asr #6\n \t\t\t@ instruction: 0x00000bb8\n \tandeq\tr0, r0, r4, lsr #17\n-\teorseq\tr1, sp, r8, asr #19\n-\tldrhteq\tr1, [sp], -r6\n-\teorseq\tr1, sp, sl, ror #19\n-\tldrshteq\tr1, [sp], -r2\n-\tldrshteq\tr1, [sp], -r2\n+\tldrsbteq\tr1, [sp], -r4\n+\teorseq\tr1, sp, r2, asr #19\n+\tldrshteq\tr1, [sp], -r6\n+\tldrshteq\tr1, [sp], -lr\n+\tldrshteq\tr1, [sp], -lr\n \tandeq\tr0, r0, r4, lsr pc\n \tandeq\tr0, r0, r4, ror #23\n \tstrdeq\tr8, [r9], #-18\t@ 0xffffffee\n-\tmlaseq\tsp, r0, r9, r1\n+\tmlaseq\tsp, ip, r9, r1\n \tldrdeq\tr0, [r0], -r8\n \teorseq\tr1, sp, lr, asr #11\n-\teorseq\tr1, sp, r6, lsl #19\n+\tmlaseq\tsp, r2, r9, r1\n \teorseq\tr1, sp, r8, lsr #4\n \n 00014e74 ::do_widen(char) const@@Base>:\n std::ctype::do_widen(char) const:\n /usr/include/c++/10/bits/locale_facets.h:1085\n \tmov\tr0, r1\n \tbx\tlr\n@@ -14841,19 +14841,19 @@\n \tmovs\tr0, #2\n \tadd\tr1, pc\n \tbl\tbff0 \n \tldrb\tr6, [r5, #1]\n \tlsls\tr1, r1, #1\n \tlsrs\tr4, r2, #5\n \tmovs\tr0, r0\n-\tasrs\tr2, r0, #11\n+\tasrs\tr6, r1, #11\n \tmovs\tr5, r7\n-\tasrs\tr4, r3, #9\n+\tasrs\tr0, r5, #9\n \tmovs\tr5, r7\n-\tasrs\tr2, r7, #9\n+\tasrs\tr6, r0, #10\n \tmovs\tr5, r7\n std::vector, std::allocator >, std::allocator, std::allocator > > >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr7, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrd\tr5, r6, [r0]\n@@ -15273,17 +15273,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr4, r4, #3\n+\tasrs\tr0, r6, #3\n \tmovs\tr5, r7\n-\tasrs\tr2, r4, #3\n+\tasrs\tr6, r5, #3\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -15915,15 +15915,15 @@\n \tstrb\tr0, [r7, #4]\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r2, #124]\t@ 0x7c\n \tlsls\tr1, r1, #1\n \tldc2\t0, cr0, [r2, #240]\t@ 0xf0\n-\tlsrs\tr2, r5, #14\n+\tlsrs\tr6, r6, #14\n \tmovs\tr5, r7\n std::vector, std::allocator > > >, std::allocator, std::allocator > > > > > >, std::allocator, std::allocator > > >, std::allocator, std::allocator > > > > > > > >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrd\tr4, r5, [r0]\n@@ -16978,15 +16978,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:235\n \tadds\tr6, #12\n \tb.n\t167d2 , std::allocator >::~basic_stringbuf()@@Base+0xe1a>\n /usr/include/c++/10/bits/stl_vector.h:1770\n \tldr\tr0, [pc, #4]\t@ (168bc , std::allocator >::~basic_stringbuf()@@Base+0xf04>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsls\tr2, r1, #14\n+\tlsls\tr6, r2, #14\n \tmovs\tr5, r7\n std::__detail::_State::~_State():\n /usr/include/c++/10/bits/regex_automaton.h:158\n \tldr\tr3, [r0, #0]\n /usr/include/c++/10/bits/regex_automaton.h:156\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -17654,15 +17654,15 @@\n \tmovs\tr0, #2\n \tadd\tr1, pc\n \tbl\tbff0 \n \tstr\tr6, [r0, #52]\t@ 0x34\n \tlsls\tr1, r1, #1\n \tlsrs\tr4, r2, #5\n \tmovs\tr0, r0\n-\tmcr2\t0, 6, r0, cr10, cr12, {1}\n+\tmrc2\t0, 6, r0, cr6, cr12, {1}\n std::__detail::_Scanner::_M_eat_escape_posix():\n /usr/include/c++/10/bits/regex_scanner.tcc:392\n \tldrd\tr3, r1, [r0, #148]\t@ 0x94\n /usr/include/c++/10/bits/regex_scanner.tcc:389\n \tpush\t{r4, r5, r6, r7, lr}\n \tldr\tr2, [pc, #216]\t@ (16e9c , std::allocator >::~basic_stringbuf()@@Base+0x14e4>)\n \tsub\tsp, #12\n@@ -17785,16 +17785,16 @@\n \tmovs\tr0, #2\n \tadd\tr1, pc\n \tbl\tbff0 \n \tstr\tr0, [r3, #24]\n \tlsls\tr1, r1, #1\n \tlsrs\tr4, r2, #5\n \tmovs\tr0, r0\n-\tstc2l\t0, cr0, [r8, #240]!\t@ 0xf0\n-\tstc2l\t0, cr0, [sl], {60}\t@ 0x3c\n+\tldc2l\t0, cr0, [r4, #240]!\t@ 0xf0\n+\tldc2l\t0, cr0, [r6], {60}\t@ 0x3c\n std::__detail::_Scanner::_M_scan_normal():\n /usr/include/c++/10/bits/regex_scanner.tcc:96\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/regex_scanner.tcc:99\n \tldr.w\tr3, [r0, #148]\t@ 0x94\n /usr/include/c++/10/bits/regex_scanner.tcc:101\n@@ -18109,17 +18109,17 @@\n \tadd\tr1, pc\n \tbl\tbff0 \n \tnop\n \tstr\tr6, [r2, #8]\n \tlsls\tr1, r1, #1\n \tlsrs\tr4, r2, #5\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa9c003c\n-\t\t\t@ instruction: 0xfbc6003c\n-\t\t\t@ instruction: 0xfbf4003c\n+\t\t\t@ instruction: 0xfaa8003c\n+\t\t\t@ instruction: 0xfbd2003c\n+\tstc2\t0, cr0, [r0], {60}\t@ 0x3c\n std::__detail::_Scanner::_M_scan_in_brace():\n /usr/include/c++/10/bits/regex_scanner.tcc:265\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/regex_scanner.tcc:268\n \tldrd\tr3, r5, [r0, #148]\t@ 0x94\n /usr/include/c++/10/bits/regex_scanner.tcc:265\n \tsub\tsp, #8\n@@ -18285,16 +18285,16 @@\n \tadd\tr1, pc\n \tbl\tbff0 \n /usr/include/c++/10/bits/regex_scanner.tcc:269\n \tldr\tr1, [pc, #12]\t@ (1723c , std::allocator >::~basic_stringbuf()@@Base+0x1884>)\n \tmovs\tr0, #6\n \tadd\tr1, pc\n \tbl\tbff0 \n-\t\t\t@ instruction: 0xfafc003c\n-\t\t\t@ instruction: 0xfabe003c\n+\t\t\t@ instruction: 0xfb08003c\n+\t\t\t@ instruction: 0xfaca003c\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #3758096384\t@ 0xe0000000\n \tldrd\tr9, r7, [r0]\n@@ -18398,15 +18398,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t172ec , std::allocator >::~basic_stringbuf()@@Base+0x1934>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1730c , std::allocator >::~basic_stringbuf()@@Base+0x1954>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tvld4.8\t{d0-d3}, [r0 :256], ip\n+\tvld4.8\t{d0-d3}, [ip :256], ip\n std::__detail::_Scanner::_M_eat_class(char):\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr.w\tr3, [r0, #160]\t@ 0xa0\n /usr/include/c++/10/bits/regex_scanner.tcc:469\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n \tmov.w\tr8, #0\n@@ -18507,16 +18507,16 @@\n \tadd\tr1, pc\n \tbl\tbff0 \n /usr/include/c++/10/bits/regex_scanner.tcc:483\n \tldr\tr1, [pc, #12]\t@ (173dc , std::allocator >::~basic_stringbuf()@@Base+0x1a24>)\n \tmovs\tr0, #0\n \tadd\tr1, pc\n \tbl\tbff0 \n-\tvst1.8\t\t\t@ instruction: 0xf988003c\n-\tldr??.w\tr0, [lr, ip, lsl #3]\n+\tldrsb.w\tr0, [r4, #60]\t@ 0x3c\n+\tvst1.8\t\t\t@ instruction: 0xf98a003c\n std::__detail::_Scanner::_M_scan_in_bracket():\n /usr/include/c++/10/bits/regex_scanner.tcc:206\n \tldrd\tr3, r1, [r0, #148]\t@ 0x94\n /usr/include/c++/10/bits/regex_scanner.tcc:203\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/regex_scanner.tcc:206\n \tcmp\tr3, r1\n@@ -18652,16 +18652,16 @@\n \tadd\tr1, pc\n \tbl\tbff0 \n /usr/include/c++/10/bits/regex_scanner.tcc:207\n \tldr\tr1, [pc, #12]\t@ (174d0 , std::allocator >::~basic_stringbuf()@@Base+0x1b18>)\n \tmovs\tr0, #4\n \tadd\tr1, pc\n \tbl\tbff0 \n-\tstr??.w\tr0, [ip, #60]\t@ 0x3c\n-\tstrh.w\tr0, [lr, #60]\t@ 0x3c\n+\tldr??.w\tr0, [r8, #60]\t@ 0x3c\n+\tldrh.w\tr0, [sl, #60]\t@ 0x3c\n std::__detail::_Scanner::_M_advance():\n /usr/include/c++/10/bits/regex_scanner.tcc:73\n \tldrd\tr1, r2, [r0, #148]\t@ 0x94\n /usr/include/c++/10/bits/regex_scanner.tcc:70\n \tmov\tr3, r0\n /usr/include/c++/10/bits/regex_scanner.tcc:73\n \tcmp\tr1, r2\n@@ -18850,33 +18850,33 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr.w\tr1, [r4, #168]\t@ 0xa8\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tldrh.w\tr0, [r8, #60]\t@ 0x3c\n+\tstr.w\tr0, [r4, #60]\t@ 0x3c\n \tldrh\tr6, [r7, r0]\n \tlsls\tr1, r1, #1\n-\tlsls\tr0, r1, #7\n+\tlsls\tr4, r2, #7\n \tmovs\tr5, r7\n-\tldrh.w\tr0, [r6, #60]\t@ 0x3c\n-\tstrh.w\tr0, [r4, #60]\t@ 0x3c\n+\tstr.w\tr0, [r2, #60]\t@ 0x3c\n+\tldrh.w\tr0, [r0, #60]\t@ 0x3c\n \tlsrs\tr4, r7, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #19\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #6\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf7f0003c\n-\t\t\t@ instruction: 0xf7da003c\n+\t\t\t@ instruction: 0xf7fc003c\n+\t\t\t@ instruction: 0xf7e6003c\n void std::vector, std::allocator > > >, std::allocator, std::allocator > > > > > >, std::allocator, std::allocator > > >, std::allocator, std::allocator > > > > > > > >::_M_realloc_insert, std::allocator > > >, std::allocator, std::allocator > > > > > const&>(__gnu_cxx::__normal_iterator, std::allocator > > >, std::allocator, std::allocator > > > > > >*, std::vector, std::allocator > > >, std::allocator, std::allocator > > > > > >, std::allocator, std::allocator > > >, std::allocator, std::allocator > > > > > > > > >, long&, std::vector, std::allocator > > >, std::allocator, std::allocator > > > > > const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n \tmov\tsl, r1\n \tldrd\tr9, r3, [r0]\n \tsub\tsp, #76\t@ 0x4c\n@@ -19454,15 +19454,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t17ad8 , std::allocator >::~basic_stringbuf()@@Base+0x2120>\n /usr/include/c++/10/bits/vector.tcc:485\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tsbc.w\tr0, r4, #60\t@ 0x3c\n+\tsbcs.w\tr0, r0, #60\t@ 0x3c\n void std::vector, std::allocator > >::_M_realloc_insert >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, std::__detail::_State&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tmov\tr1, r2\n \tvpush\t{d8}\n \tsub\tsp, #28\n@@ -20277,15 +20277,15 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/vector.tcc:493\n \tblx\tb9cc <__cxa_rethrow@plt>\n /usr/include/c++/10/bits/vector.tcc:485\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\t\t\t@ instruction: 0xeaf6003c\n+\tadd.w\tr0, r2, ip, rrx\n std::__detail::_NFA >::_M_insert_dummy():\n /usr/include/c++/10/bits/regex_automaton.h:323\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/regex_automaton.h:99\n \tmovs\tr2, #10\n \tmov.w\tr3, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/regex_automaton.h:323\n@@ -20375,15 +20375,15 @@\n \tnop\n \tldr\tr5, [pc, #464]\t@ (18448 , std::allocator >::~basic_stringbuf()@@Base+0x2a90>)\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr5, [pc, #168]\t@ (18328 , std::allocator >::~basic_stringbuf()@@Base+0x2970>)\n \tlsls\tr1, r1, #1\n-\tsubs.w\tr0, r2, ip, rrx\n+\tsubs.w\tr0, lr, ip, rrx\n std::__detail::_NFA >::_M_insert_backref(unsigned int):\n /usr/include/c++/10/bits/regex_automaton.tcc:149\n \tldr\tr2, [pc, #396]\t@ (18414 , std::allocator >::~basic_stringbuf()@@Base+0x2a5c>)\n \tldr\tr3, [pc, #400]\t@ (18418 , std::allocator >::~basic_stringbuf()@@Base+0x2a60>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/regex_constants.h:186\n@@ -20612,20 +20612,20 @@\n \tmov\tr0, r6\n \tbl\t168c0 , std::allocator >::~basic_stringbuf()@@Base+0xf08>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldr\tr4, [pc, #864]\t@ (18778 , std::allocator >::~basic_stringbuf()@@Base+0x2dc0>)\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\trsb\tr0, sl, ip, rrx\n+\trsbs\tr0, r6, ip, rrx\n \tldr\tr3, [pc, #696]\t@ (186dc , std::allocator >::~basic_stringbuf()@@Base+0x2d24>)\n \tlsls\tr1, r1, #1\n-\tbic.w\tr0, sl, ip, rrx\n-\t\t\t@ instruction: 0xeae4003c\n-\t\t\t@ instruction: 0xeaaa003c\n+\tbics.w\tr0, r6, ip, rrx\n+\t\t\t@ instruction: 0xeaf0003c\n+\t\t\t@ instruction: 0xeab6003c\n std::__detail::_BracketMatcher, false, false>::~_BracketMatcher():\n /usr/include/c++/10/bits/regex_compiler.h:413\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr7, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r0, #36]\t@ 0x24\n /usr/include/c++/10/bits/stl_vector.h:353\n@@ -21111,15 +21111,15 @@\n \tnop\n \tldr\tr0, [pc, #968]\t@ (18adc , std::allocator >::~basic_stringbuf()@@Base+0x3124>)\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr0, [pc, #592]\t@ (1896c , std::allocator >::~basic_stringbuf()@@Base+0x2fb4>)\n \tlsls\tr1, r1, #1\n-\tb.n\t18558 , std::allocator >::~basic_stringbuf()@@Base+0x2ba0>\n+\tb.n\t18570 , std::allocator >::~basic_stringbuf()@@Base+0x2bb8>\n \tmovs\tr4, r7\n std::__detail::_NFA >::_M_insert_matcher(std::function):\n /usr/include/c++/10/bits/regex_automaton.h:268\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr2, r1\n \tldr\tr1, [pc, #232]\t@ (18810 , std::allocator >::~basic_stringbuf()@@Base+0x2e58>)\n \tldr\tr3, [pc, #236]\t@ (18814 , std::allocator >::~basic_stringbuf()@@Base+0x2e5c>)\n@@ -21252,15 +21252,15 @@\n \t\t\t@ instruction: 0xffffffff\n \tldr\tr0, [pc, #216]\t@ (188ec , std::allocator >::~basic_stringbuf()@@Base+0x2f34>)\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0x479a\n \tlsls\tr1, r1, #1\n-\tb.n\t18464 , std::allocator >::~basic_stringbuf()@@Base+0x2aac>\n+\tb.n\t1847c , std::allocator >::~basic_stringbuf()@@Base+0x2ac4>\n \tmovs\tr4, r7\n std::__detail::_BracketMatcher, false, false>::_M_ready():\n /usr/include/c++/10/bits/regex_compiler.h:499\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr1, [pc, #2908]\t@ 19384 , std::allocator >::~basic_stringbuf()@@Base+0x39cc>\n \tsub\tsp, #92\t@ 0x5c\n@@ -27062,15 +27062,15 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tmovs\tr1, #60\t@ 0x3c\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr0, r4, #0\n \tlsls\tr1, r1, #1\n-\tcbnz\tr2, 1b2ee , std::allocator >::~basic_stringbuf()@@Base+0x5936>\n+\tcbnz\tr6, 1b2f0 , std::allocator >::~basic_stringbuf()@@Base+0x5938>\n \tmovs\tr4, r7\n std::__detail::_Executor<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, std::__cxx11::regex_traits, false>::_M_lookahead(long):\n /usr/include/c++/10/bits/regex_executor.tcc:147\n \tldr.w\tr2, [pc, #1300]\t@ 1b7d8 , std::allocator >::~basic_stringbuf()@@Base+0x5e20>\n \tldr.w\tr3, [pc, #1300]\t@ 1b7dc , std::allocator >::~basic_stringbuf()@@Base+0x5e24>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -27755,15 +27755,15 @@\n \tnop\n \tadds\tr4, r2, #2\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr4, r3, r4\n \tlsls\tr1, r1, #1\n-\tpush\t{r1, r3, r5, r7}\n+\tpush\t{r1, r2, r4, r5, r7}\n \tmovs\tr4, r7\n std::__detail::_Executor<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, std::__cxx11::regex_traits, false>::_M_dfs(std::__detail::_Executor<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, std::__cxx11::regex_traits, false>::_Match_mode, long):\n /usr/include/c++/10/bits/regex_executor.tcc:506\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n /usr/include/c++/10/bits/unique_ptr.h:173\n \tldr\tr1, [r0, #60]\t@ 0x3c\n@@ -29438,17 +29438,17 @@\n \tmov\tr0, r7\n \tbl\t15dc8 , std::allocator >::~basic_stringbuf()@@Base+0x410>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tlsrs\tr2, r0, #22\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #544\t@ 0x220\n+\tadd\tr0, sp, #592\t@ 0x250\n \tmovs\tr4, r7\n-\tadd\tr0, sp, #512\t@ 0x200\n+\tadd\tr0, sp, #560\t@ 0x230\n \tmovs\tr4, r7\n std::__detail::_Compiler >::_M_cur_int_value(int):\n /usr/include/c++/10/bits/regex_compiler.tcc:602\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r0\n \tldr\tr2, [pc, #720]\t@ (1c6e8 , std::allocator >::~basic_stringbuf()@@Base+0x6d30>)\n \tvpush\t{d8}\n@@ -30359,15 +30359,15 @@\n \tb.n\t1ca02 , std::allocator >::~basic_stringbuf()@@Base+0x704a>\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #8]\t@ (1ca5c , std::allocator >::~basic_stringbuf()@@Base+0x70a4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n /usr/include/c++/10/ext/new_allocator.h:106\n \tblx\tb0c8 \n-\tadd\tr4, pc, #1000\t@ (adr r4, 1ce48 , std::allocator >::~basic_stringbuf()@@Base+0x7490>)\n+\tadd\tr5, pc, #24\t@ (adr r5, 1ca78 , std::allocator >::~basic_stringbuf()@@Base+0x70c0>)\n \tmovs\tr4, r7\n std::__detail::_StateSeq >::_M_clone():\n /usr/include/c++/10/bits/regex_automaton.tcc:195\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_tree.h:175\n \tmovs\tr3, #0\n /usr/include/c++/10/bits/regex_automaton.tcc:195\n@@ -31194,15 +31194,15 @@\n \tb.n\t1d00e , std::allocator >::~basic_stringbuf()@@Base+0x7656>\n \tnop\n \tlsls\tr0, r6, #19\n \tlsls\tr1, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvmla.i\tq8, q0, d0[2]\n-\tldr\tr5, [sp, #864]\t@ 0x360\n+\tldr\tr5, [sp, #912]\t@ 0x390\n \tmovs\tr4, r7\n std::deque >, std::allocator > > >::_M_reallocate_map(unsigned int, bool):\n /usr/include/c++/10/bits/deque.tcc:928\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr9, r1\n \tmov\tsl, r2\n /usr/include/c++/10/bits/deque.tcc:932\n@@ -31423,15 +31423,15 @@\n /usr/include/c++/10/bits/deque.tcc:494\n \tldr\tr6, [r4, #36]\t@ 0x24\n \tb.n\t1d184 , std::allocator >::~basic_stringbuf()@@Base+0x77cc>\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #4]\t@ (1d1c0 , std::allocator >::~basic_stringbuf()@@Base+0x7808>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr5, [sp, #584]\t@ 0x248\n+\tldr\tr5, [sp, #632]\t@ 0x278\n \tmovs\tr4, r7\n void std::__detail::_Compiler >::_M_insert_any_matcher_posix():\n /usr/include/c++/10/bits/regex_compiler.tcc:385\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n \tldr\tr5, [pc, #120]\t@ (1d244 , std::allocator >::~basic_stringbuf()@@Base+0x788c>)\n \tldr\tr0, [pc, #124]\t@ (1d248 , std::allocator >::~basic_stringbuf()@@Base+0x7890>)\n@@ -32918,15 +32918,15 @@\n \tb.n\t1db92 , std::allocator >::~basic_stringbuf()@@Base+0x81da>\n \tnop.w\n \t...\n \t\t\t@ instruction: 0xf5f80048\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tand.w\tr0, sl, #13107200\t@ 0xc80000\n-\tstr\tr3, [sp, #832]\t@ 0x340\n+\tstr\tr3, [sp, #880]\t@ 0x370\n \tmovs\tr4, r7\n void std::__detail::_Compiler >::_M_insert_character_class_matcher():\n /usr/include/c++/10/bits/regex_compiler.tcc:409\n \tldr\tr2, [pc, #612]\t@ (1de38 , std::allocator >::~basic_stringbuf()@@Base+0x8480>)\n \tldr\tr3, [pc, #616]\t@ (1de3c , std::allocator >::~basic_stringbuf()@@Base+0x8484>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tadd\tr2, pc\n@@ -33271,15 +33271,15 @@\n \tnop\n \tnop.w\n \t...\n \tusat\tr0, #8, r8, lsl #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf1940048\n-\tstr\tr1, [sp, #360]\t@ 0x168\n+\tstr\tr1, [sp, #408]\t@ 0x198\n \tmovs\tr4, r7\n void std::deque >, std::allocator > > >::_M_push_back_aux > const&>(std::__detail::_StateSeq > const&):\n /usr/include/c++/10/bits/deque.tcc:481\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr5, r1\n /usr/include/c++/10/bits/stl_deque.h:356\n \tldr\tr3, [r0, #20]\n@@ -33354,15 +33354,15 @@\n /usr/include/c++/10/bits/deque.tcc:494\n \tldr\tr6, [r7, #36]\t@ 0x24\n \tb.n\t1de98 , std::allocator >::~basic_stringbuf()@@Base+0x84e0>\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #4]\t@ (1ded4 , std::allocator >::~basic_stringbuf()@@Base+0x851c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstr\tr0, [sp, #504]\t@ 0x1f8\n+\tstr\tr0, [sp, #552]\t@ 0x228\n \tmovs\tr4, r7\n std::deque >, std::allocator > > >::push_back(std::__detail::_StateSeq > const&):\n /usr/include/c++/10/bits/stl_deque.h:1493\n \tpush\t{r4, lr}\n /usr/include/c++/10/bits/stl_deque.h:1496\n \tldr\tr4, [r0, #32]\n /usr/include/c++/10/bits/stl_deque.h:1495\n@@ -34395,27 +34395,27 @@\n \tmov\tr0, r7\n \tbl\t168c0 , std::allocator >::~basic_stringbuf()@@Base+0xf08>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \torrs.w\tr0, r8, #72\t@ 0x48\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tands.w\tr0, r6, #72\t@ 0x48\n-\tldrh\tr4, [r0, #16]\n+\tldrh\tr0, [r2, #16]\n \tmovs\tr4, r7\n-\tldrh\tr2, [r2, #14]\n+\tldrh\tr6, [r3, #14]\n \tmovs\tr4, r7\n-\tldrh\tr4, [r3, #0]\n+\tldrh\tr0, [r5, #0]\n \tmovs\tr4, r7\n-\tldrh\tr6, [r2, #12]\n+\tldrh\tr2, [r4, #12]\n \tmovs\tr4, r7\n-\tldrh\tr0, [r0, #16]\n+\tldrh\tr4, [r1, #16]\n \tmovs\tr4, r7\n-\tstrh\tr2, [r6, #62]\t@ 0x3e\n+\tstrh\tr6, [r7, #62]\t@ 0x3e\n \tmovs\tr4, r7\n-\tstrh\tr0, [r5, #62]\t@ 0x3e\n+\tstrh\tr4, [r6, #62]\t@ 0x3e\n \tmovs\tr4, r7\n void std::vector::_RegexMask, std::allocator::_RegexMask> >::_M_realloc_insert::_RegexMask const&>(__gnu_cxx::__normal_iterator::_RegexMask*, std::vector::_RegexMask, std::allocator::_RegexMask> > >, std::__cxx11::regex_traits::_RegexMask const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tmov\tr1, r2\n \tldrd\tr7, r9, [r0]\n@@ -34577,15 +34577,15 @@\n \tadds\tr0, #4\n \tstr.w\tr3, [r8]\n \tb.n\t1e6ee , std::allocator >::~basic_stringbuf()@@Base+0x8d36>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1e7e4 , std::allocator >::~basic_stringbuf()@@Base+0x8e2c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrh\tr6, [r0, #34]\t@ 0x22\n+\tstrh\tr2, [r2, #34]\t@ 0x22\n \tmovs\tr4, r7\n std::pair, std::allocator >, std::__cxx11::basic_string, std::allocator > >::~pair():\n /usr/include/c++/10/bits/basic_string.h:203\n \tadd.w\tr3, r0, #32\n /usr/include/c++/10/bits/stl_pair.h:211\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -34810,15 +34810,15 @@\n \tnop\n \tb.n\t1e7c0 , std::allocator >::~basic_stringbuf()@@Base+0x8e08>\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t1e684 , std::allocator >::~basic_stringbuf()@@Base+0x8ccc>\n \tlsls\tr0, r1, #1\n-\tstrh\tr0, [r6, #24]\n+\tstrh\tr4, [r7, #24]\n \tmovs\tr4, r7\n \tstrb\tr0, [r5, #19]\n \tmovs\tr4, r7\n std::__detail::_BracketMatcher, false, true>::_M_ready():\n /usr/include/c++/10/bits/regex_compiler.h:499\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n@@ -36983,15 +36983,15 @@\n \t...\n \tbls.n\t1f7f4 , std::allocator >::~basic_stringbuf()@@Base+0x9e3c>\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbvc.n\t1f940 , std::allocator >::~basic_stringbuf()@@Base+0x9f88>\n \tlsls\tr0, r1, #1\n-\tstrb\tr0, [r0, #28]\n+\tstrb\tr4, [r1, #28]\n \tmovs\tr4, r7\n std::__detail::_BracketMatcher, true, true>::_M_ready():\n /usr/include/c++/10/bits/regex_compiler.h:499\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr1, [pc, #2524]\t@ 20284 , std::allocator >::~basic_stringbuf()@@Base+0xa8cc>\n \tsub\tsp, #124\t@ 0x7c\n@@ -38848,15 +38848,15 @@\n \t...\n \tldmia\tr4!, {r6, r7}\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmia\tr2!, {r1, r5, r6}\n \tlsls\tr0, r1, #1\n-\tldr\tr0, [r2, #32]\n+\tldr\tr4, [r3, #32]\n \tmovs\tr4, r7\n std::__cxx11::basic_string, std::allocator > std::__cxx11::regex_traits::lookup_collatename(char const*, char const*) const:\n /usr/include/c++/10/bits/regex.tcc:124\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tmov\tr5, r3\n \tvpush\t{d8}\n@@ -41549,15 +41549,15 @@\n \tcmp.w\tr9, #0\n \tbeq.n\t21954 , std::allocator >::~basic_stringbuf()@@Base+0xbf9c>\n \tb.n\t21970 , std::allocator >::~basic_stringbuf()@@Base+0xbfb8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (219a0 , std::allocator >::~basic_stringbuf()@@Base+0xbfe8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrh\tr2, [r1, r2]\n+\tstrh\tr6, [r2, r2]\n \tmovs\tr4, r7\n void std::vector >::emplace_back(char&&):\n /usr/include/c++/10/bits/vector.tcc:109\n \tpush\t{r4}\n /usr/include/c++/10/bits/vector.tcc:112\n \tldrd\tr4, r2, [r0, #4]\n \tcmp\tr4, r2\n@@ -42035,15 +42035,15 @@\n \tadds\tr0, #2\n \tstrh.w\tr3, [r8]\n \tb.n\t21c2e , std::allocator >::~basic_stringbuf()@@Base+0xc276>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (21d24 , std::allocator >::~basic_stringbuf()@@Base+0xc36c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr7, [pc, #24]\t@ (21d40 , std::allocator >::~basic_stringbuf()@@Base+0xc388>)\n+\tldr\tr7, [pc, #72]\t@ (21d70 , std::allocator >::~basic_stringbuf()@@Base+0xc3b8>)\n \tmovs\tr4, r7\n bool std::__detail::_Compiler >::_M_expression_term(std::pair&, std::__detail::_BracketMatcher, false, false>&):\n /usr/include/c++/10/bits/regex_compiler.tcc:455\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1212]\t@ 221ec , std::allocator >::~basic_stringbuf()@@Base+0xc834>\n \tldr.w\tr3, [pc, #1212]\t@ 221f0 , std::allocator >::~basic_stringbuf()@@Base+0xc838>\n@@ -42768,27 +42768,27 @@\n \tbl\tbff0 \n \tsxth\tr0, r5\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcbz\tr0, 22214 , std::allocator >::~basic_stringbuf()@@Base+0xc85c>\n \tlsls\tr0, r1, #1\n-\tstr\tr2, [r2, r5]\n+\tstr\tr6, [r3, r5]\n \tmovs\tr4, r7\n-\tldr\tr6, [pc, #656]\t@ (22490 , std::allocator >::~basic_stringbuf()@@Base+0xcad8>)\n+\tldr\tr6, [pc, #704]\t@ (224c0 , std::allocator >::~basic_stringbuf()@@Base+0xcb08>)\n \tmovs\tr4, r7\n-\tldr\tr7, [pc, #408]\t@ (2239c , std::allocator >::~basic_stringbuf()@@Base+0xc9e4>)\n+\tldr\tr7, [pc, #456]\t@ (223cc , std::allocator >::~basic_stringbuf()@@Base+0xca14>)\n \tmovs\tr4, r7\n-\tldr\tr7, [pc, #512]\t@ (22408 , std::allocator >::~basic_stringbuf()@@Base+0xca50>)\n+\tldr\tr7, [pc, #560]\t@ (22438 , std::allocator >::~basic_stringbuf()@@Base+0xca80>)\n \tmovs\tr4, r7\n-\tldr\tr6, [pc, #672]\t@ (224ac , std::allocator >::~basic_stringbuf()@@Base+0xcaf4>)\n+\tldr\tr6, [pc, #720]\t@ (224dc , std::allocator >::~basic_stringbuf()@@Base+0xcb24>)\n \tmovs\tr4, r7\n-\tldr\tr6, [pc, #448]\t@ (223d0 , std::allocator >::~basic_stringbuf()@@Base+0xca18>)\n+\tldr\tr6, [pc, #496]\t@ (22400 , std::allocator >::~basic_stringbuf()@@Base+0xca48>)\n \tmovs\tr4, r7\n-\tldr\tr7, [pc, #8]\t@ (2221c , std::allocator >::~basic_stringbuf()@@Base+0xc864>)\n+\tldr\tr7, [pc, #56]\t@ (2224c , std::allocator >::~basic_stringbuf()@@Base+0xc894>)\n \tmovs\tr4, r7\n void std::__detail::_Compiler >::_M_insert_bracket_matcher(bool):\n /usr/include/c++/10/bits/regex_compiler.tcc:424\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr6, #0\n@@ -43974,27 +43974,27 @@\n \tnop\n \tadd\tr2, sp, #624\t@ 0x270\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr1, sp, #920\t@ 0x398\n \tlsls\tr0, r1, #1\n-\tldr\tr1, [pc, #792]\t@ (22d1c , std::allocator >::~basic_stringbuf()@@Base+0xd364>)\n+\tldr\tr1, [pc, #840]\t@ (22d4c , std::allocator >::~basic_stringbuf()@@Base+0xd394>)\n \tmovs\tr4, r7\n-\tmov\tlr, r3\n+\tmov\tsl, r5\n \tmovs\tr4, r7\n-\tbx\tip\n+\tbxns\tsp\n \tmovs\tr4, r7\n-\tbx\tpc\n+\t\t\t@ instruction: 0x4786\n \tmovs\tr4, r7\n-\tmov\tsl, r4\n+\tmov\tlr, r5\n \tmovs\tr4, r7\n-\tmov\tr2, sp\n+\tmov\tr6, lr\n \tmovs\tr4, r7\n-\tmov\tip, pc\n+\tbx\tr1\n \tmovs\tr4, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n void std::__detail::_Compiler >::_M_insert_bracket_matcher(bool):\n /usr/include/c++/10/bits/regex_compiler.tcc:424\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r0\n@@ -44756,15 +44756,15 @@\n \tstr\tr6, [r7, #40]\t@ 0x28\n \tstr\tr0, [r7, #44]\t@ 0x2c\n \tb.n\t22d72 , std::allocator >::~basic_stringbuf()@@Base+0xd3ba>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (22fb8 , std::allocator >::~basic_stringbuf()@@Base+0xd600>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tsubs\tr4, #114\t@ 0x72\n+\tsubs\tr4, #126\t@ 0x7e\n \tmovs\tr4, r7\n std::__detail::_BracketMatcher, true, true>::_M_make_range(char, char):\n /usr/include/c++/10/bits/regex_compiler.h:488\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n \tldr\tr2, [pc, #776]\t@ (232cc , std::allocator >::~basic_stringbuf()@@Base+0xd914>)\n \tldr\tr3, [pc, #776]\t@ (232d0 , std::allocator >::~basic_stringbuf()@@Base+0xd918>)\n@@ -45258,15 +45258,15 @@\n \tb.n\t232a2 , std::allocator >::~basic_stringbuf()@@Base+0xd8ea>\n \tldr\tr7, [sp, #608]\t@ 0x260\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr5, [sp, #792]\t@ 0x318\n \tlsls\tr0, r1, #1\n-\tsubs\tr6, #50\t@ 0x32\n+\tsubs\tr6, #62\t@ 0x3e\n \tmovs\tr4, r7\n bool std::__detail::_Compiler >::_M_expression_term(std::pair&, std::__detail::_BracketMatcher, true, true>&):\n /usr/include/c++/10/bits/regex_compiler.tcc:455\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1256]\t@ 237cc , std::allocator >::~basic_stringbuf()@@Base+0xde14>\n \tldr.w\tr3, [pc, #1256]\t@ 237d0 , std::allocator >::~basic_stringbuf()@@Base+0xde18>\n@@ -46017,25 +46017,25 @@\n \tnop\n \tldr\tr4, [sp, #464]\t@ 0x1d0\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [sp, #752]\t@ 0x2f0\n \tlsls\tr0, r1, #1\n-\tsubs\tr3, #158\t@ 0x9e\n+\tsubs\tr3, #170\t@ 0xaa\n \tmovs\tr4, r7\n-\tsubs\tr1, #156\t@ 0x9c\n+\tsubs\tr1, #168\t@ 0xa8\n \tmovs\tr4, r7\n-\tsubs\tr1, #182\t@ 0xb6\n+\tsubs\tr1, #194\t@ 0xc2\n \tmovs\tr4, r7\n-\tsubs\tr0, #204\t@ 0xcc\n+\tsubs\tr0, #216\t@ 0xd8\n \tmovs\tr4, r7\n-\tsubs\tr0, #140\t@ 0x8c\n+\tsubs\tr0, #152\t@ 0x98\n \tmovs\tr4, r7\n-\tsubs\tr0, #136\t@ 0x88\n+\tsubs\tr0, #148\t@ 0x94\n \tmovs\tr4, r7\n void std::__detail::_Compiler >::_M_insert_bracket_matcher(bool):\n /usr/include/c++/10/bits/regex_compiler.tcc:424\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r0\n \tldr\tr5, [pc, #696]\t@ (23ab0 , std::allocator >::~basic_stringbuf()@@Base+0xe0f8>)\n \tsub\tsp, #232\t@ 0xe8\n@@ -47004,15 +47004,15 @@\n \tb.n\t23e1e , std::allocator >::~basic_stringbuf()@@Base+0xe466>\n \tstr\tr4, [sp, #112]\t@ 0x70\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr2, [sp, #296]\t@ 0x128\n \tlsls\tr0, r1, #1\n-\tadds\tr2, #182\t@ 0xb6\n+\tadds\tr2, #194\t@ 0xc2\n \tmovs\tr4, r7\n bool std::__detail::_Compiler >::_M_expression_term(std::pair&, std::__detail::_BracketMatcher, false, true>&):\n /usr/include/c++/10/bits/regex_compiler.tcc:455\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1172]\t@ 242f4 , std::allocator >::~basic_stringbuf()@@Base+0xe93c>\n \tldr.w\tr3, [pc, #1172]\t@ 242f8 , std::allocator >::~basic_stringbuf()@@Base+0xe940>\n@@ -47717,25 +47717,25 @@\n \tbl\tbff0 \n \tstr\tr0, [sp, #992]\t@ 0x3e0\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [sp, #264]\t@ 0x108\n \tlsls\tr0, r1, #1\n-\tadds\tr0, #36\t@ 0x24\n+\tadds\tr0, #48\t@ 0x30\n \tmovs\tr4, r7\n-\tcmp\tr5, #146\t@ 0x92\n+\tcmp\tr5, #158\t@ 0x9e\n \tmovs\tr4, r7\n-\tcmp\tr6, #84\t@ 0x54\n+\tcmp\tr6, #96\t@ 0x60\n \tmovs\tr4, r7\n-\tcmp\tr5, #160\t@ 0xa0\n+\tcmp\tr5, #172\t@ 0xac\n \tmovs\tr4, r7\n-\tcmp\tr6, #98\t@ 0x62\n+\tcmp\tr6, #110\t@ 0x6e\n \tmovs\tr4, r7\n-\tcmp\tr5, #94\t@ 0x5e\n+\tcmp\tr5, #106\t@ 0x6a\n \tmovs\tr4, r7\n void std::__detail::_Compiler >::_M_insert_bracket_matcher(bool):\n /usr/include/c++/10/bits/regex_compiler.tcc:424\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r0\n \tldr\tr5, [pc, #712]\t@ (245e8 , std::allocator >::~basic_stringbuf()@@Base+0xec30>)\n \tsub\tsp, #232\t@ 0xe8\n@@ -48820,19 +48820,19 @@\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r2, #2]\n \tlsls\tr0, r1, #1\n \tldrh\tr2, [r3, #0]\n \tlsls\tr0, r1, #1\n-\tmovs\tr6, #248\t@ 0xf8\n+\tmovs\tr7, #4\n \tmovs\tr4, r7\n-\tmovs\tr3, #162\t@ 0xa2\n+\tmovs\tr3, #174\t@ 0xae\n \tmovs\tr4, r7\n-\tmovs\tr3, #152\t@ 0x98\n+\tmovs\tr3, #164\t@ 0xa4\n \tmovs\tr4, r7\n std::__detail::_Compiler >::_M_alternative():\n /usr/include/c++/10/bits/regex_compiler.tcc:120\n \tldr\tr2, [pc, #468]\t@ (24c88 , std::allocator >::~basic_stringbuf()@@Base+0xf2d0>)\n \tldr\tr3, [pc, #472]\t@ (24c8c , std::allocator >::~basic_stringbuf()@@Base+0xf2d4>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -49068,15 +49068,15 @@\n \tbl\tbff0 \n \tstrh\tr4, [r5, #36]\t@ 0x24\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr0, [r5, #32]\n \tlsls\tr0, r1, #1\n-\tmovs\tr1, #146\t@ 0x92\n+\tmovs\tr1, #158\t@ 0x9e\n \tmovs\tr4, r7\n std::__detail::_Compiler >::_M_disjunction():\n /usr/include/c++/10/bits/regex_compiler.tcc:96\n \tldr\tr2, [pc, #628]\t@ (24f10 , std::allocator >::~basic_stringbuf()@@Base+0xf558>)\n \tldr\tr3, [pc, #632]\t@ (24f14 , std::allocator >::~basic_stringbuf()@@Base+0xf55c>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -49386,17 +49386,17 @@\n \t\t\t@ instruction: 0xffffffff\n \tstrh\tr4, [r0, #22]\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr4, [r3, #20]\n \tlsls\tr0, r1, #1\n-\tsubs\tr4, r7, #4\n+\tsubs\tr0, r1, #5\n \tmovs\tr4, r7\n-\tsubs\tr2, r6, #4\n+\tsubs\tr6, r7, #4\n \tmovs\tr4, r7\n std::__detail::_Compiler >::_Compiler(char const*, char const*, std::locale const&, std::regex_constants::syntax_option_type):\n /usr/include/c++/10/bits/regex_compiler.tcc:65\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/regex_compiler.tcc:80\n \tmov\tr8, r0\n /usr/include/c++/10/bits/regex_compiler.tcc:65\n@@ -50070,19 +50070,19 @@\n \tmovs\tr0, r0\n \tldrb\tr0, [r6, #31]\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r7, #8\n \tmovs\tr0, r0\n \tldrb\tr2, [r4, #19]\n \tlsls\tr0, r1, #1\n-\tsubs\tr4, r1, r3\n+\tsubs\tr0, r3, r3\n \tmovs\tr4, r7\n-\tsubs\tr6, r1, r0\n+\tsubs\tr2, r3, r0\n \tmovs\tr4, r7\n-\tsubs\tr2, r0, r0\n+\tsubs\tr6, r1, r0\n \tmovs\tr4, r7\n std::__detail::_Compiler >::_M_assertion():\n /usr/include/c++/10/bits/regex_compiler.tcc:151\n \tldr\tr2, [pc, #908]\t@ (257c8 , std::allocator >::~basic_stringbuf()@@Base+0xfe10>)\n \tldr\tr3, [pc, #912]\t@ (257cc , std::allocator >::~basic_stringbuf()@@Base+0xfe14>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n@@ -50563,25 +50563,25 @@\n \tnop\n \tldrb\tr4, [r4, #12]\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r6, #11]\n \tlsls\tr0, r1, #1\n-\tadds\tr6, r7, r2\n+\tadds\tr2, r1, r3\n \tmovs\tr4, r7\n-\tasrs\tr0, r5, #26\n+\tasrs\tr4, r6, #26\n \tmovs\tr4, r7\n-\tasrs\tr6, r1, #26\n+\tasrs\tr2, r3, #26\n \tmovs\tr4, r7\n-\tadds\tr4, r0, r7\n+\tadds\tr0, r2, r7\n \tmovs\tr4, r7\n-\tasrs\tr6, r5, #25\n+\tasrs\tr2, r7, #25\n \tmovs\tr4, r7\n-\tasrs\tr4, r4, #25\n+\tasrs\tr0, r6, #25\n \tmovs\tr4, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n MiraScaffold::cafmafload_callback(std::__cxx11::list >&, ReadPool&):\n ./src/modules/mod_scaffold.C:48\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr7, r0\n@@ -50927,15 +50927,15 @@\n \tnop\n \tnop.w\n \t...\n \tstrb\tr0, [r4, #28]\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tsubs\tr2, r2, #4\n+\tsubs\tr6, r3, #4\n \tmovs\tr4, r7\n \tstrb\tr4, [r5, #27]\n \tlsls\tr0, r1, #1\n \tpush\t{r7}\n \tlsls\tr0, r1, #1\n \tvminnm.f32\t, , \n \tpush\t{r1, r2, r3, r4}\n@@ -50944,15 +50944,15 @@\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #7\n \tmovs\tr4, r7\n-\tadds\tr4, r7, #5\n+\tadds\tr0, r1, #6\n \tmovs\tr4, r7\n \tlsls\tr4, r7, #23\n \tmovs\tr4, r7\n void std::__cxx11::basic_string, std::allocator >::_M_construct(char*, char*, std::forward_iterator_tag) [clone .constprop.0]:\n /usr/include/c++/10/bits/basic_string.tcc:206\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/basic_string.tcc:211\n@@ -51311,15 +51311,15 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tstrb\tr0, [r6, #11]\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr4, r3, r6\n+\tsubs\tr0, r5, r6\n \tmovs\tr4, r7\n \tsub\tsp, #328\t@ 0x148\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n@@ -51727,67 +51727,67 @@\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr4, [r2, #5]\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr6, r6, r0\n+\tsubs\tr2, r0, r1\n \tmovs\tr4, r7\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n-\tlsls\tr4, r1, #6\n+\tlsls\tr4, r2, #6\n \tmovs\tr5, r7\n-\tlsls\tr4, r4, #28\n+\tlsls\tr0, r6, #28\n \tmovs\tr4, r7\n-\tsubs\tr4, r1, r0\n+\tsubs\tr0, r3, r0\n \tmovs\tr4, r7\n-\tadds\tr6, r4, #0\n+\tadds\tr2, r6, #0\n \tmovs\tr4, r7\n-\tadds\tr6, r4, #0\n+\tadds\tr2, r6, #0\n \tmovs\tr4, r7\n-\tadds\tr2, r2, #2\n+\tadds\tr6, r3, #2\n \tmovs\tr4, r7\n-\tadds\tr4, r2, #2\n+\tadds\tr0, r4, #2\n \tmovs\tr4, r7\n-\tadds\tr6, r5, #7\n+\tadds\tr2, r7, #7\n \tmovs\tr4, r7\n-\tsubs\tr2, r2, #6\n+\tsubs\tr6, r3, #6\n \tmovs\tr4, r7\n-\tmovs\tr0, #76\t@ 0x4c\n+\tmovs\tr0, #88\t@ 0x58\n \tmovs\tr4, r7\n-\tmovs\tr2, #128\t@ 0x80\n+\tmovs\tr2, #140\t@ 0x8c\n \tmovs\tr4, r7\n-\tmovs\tr2, #152\t@ 0x98\n+\tmovs\tr2, #164\t@ 0xa4\n \tmovs\tr4, r7\n-\tmovs\tr3, #68\t@ 0x44\n+\tmovs\tr3, #80\t@ 0x50\n \tmovs\tr4, r7\n-\tmovs\tr3, #112\t@ 0x70\n+\tmovs\tr3, #124\t@ 0x7c\n \tmovs\tr4, r7\n-\tmovs\tr3, #164\t@ 0xa4\n+\tmovs\tr3, #176\t@ 0xb0\n \tmovs\tr4, r7\n-\tmovs\tr3, #208\t@ 0xd0\n+\tmovs\tr3, #220\t@ 0xdc\n \tmovs\tr4, r7\n-\tmovs\tr4, #60\t@ 0x3c\n+\tmovs\tr4, #72\t@ 0x48\n \tmovs\tr4, r7\n-\tmovs\tr5, #28\n+\tmovs\tr5, #40\t@ 0x28\n \tmovs\tr4, r7\n-\tmovs\tr5, #68\t@ 0x44\n+\tmovs\tr5, #80\t@ 0x50\n \tmovs\tr4, r7\n-\tmovs\tr5, #76\t@ 0x4c\n+\tmovs\tr5, #88\t@ 0x58\n \tmovs\tr4, r7\n-\tmovs\tr5, #160\t@ 0xa0\n+\tmovs\tr5, #172\t@ 0xac\n \tmovs\tr4, r7\n-\tmovs\tr6, #100\t@ 0x64\n+\tmovs\tr6, #112\t@ 0x70\n \tmovs\tr4, r7\n-\tmovs\tr6, #128\t@ 0x80\n+\tmovs\tr6, #140\t@ 0x8c\n \tmovs\tr4, r7\n \tldr\tr6, [r6, #120]\t@ 0x78\n \tlsls\tr0, r1, #1\n-\tcmp\tr0, #38\t@ 0x26\n+\tcmp\tr0, #50\t@ 0x32\n \tmovs\tr4, r7\n MiraBait::setupOutfiles(std::__cxx11::basic_string, std::allocator > const&, unsigned char, unsigned char, std::basic_ofstream >&, std::basic_ofstream >&):\n ./src/modules/mod_bait.C:298\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r3\n \tldr.w\tr1, [pc, #1824]\t@ 267a8 , std::allocator >::~basic_stringbuf()@@Base+0x10df0>\n \tvpush\t{d8}\n@@ -52809,17 +52809,17 @@\n \tldr\tr4, [r0, #108]\t@ 0x6c\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr4, sp, #528\t@ 0x210\n \tlsls\tr0, r1, #1\n \tstc2\t0, cr0, [r6, #236]\t@ 0xec\n-\tcmp\tr1, #224\t@ 0xe0\n+\tcmp\tr1, #236\t@ 0xec\n \tmovs\tr4, r7\n-\tcmp\tr1, #182\t@ 0xb6\n+\tcmp\tr1, #194\t@ 0xc2\n \tmovs\tr4, r7\n \tadd\tr3, sp, #848\t@ 0x350\n \tlsls\tr0, r1, #1\n \tadd\tr3, sp, #720\t@ 0x2d0\n \tlsls\tr0, r1, #1\n \tadd\tr3, sp, #296\t@ 0x128\n \tlsls\tr0, r1, #1\n@@ -52829,45 +52829,45 @@\n \tlsls\tr0, r1, #1\n \tadd\tr2, sp, #752\t@ 0x2f0\n \tlsls\tr0, r1, #1\n \tadd\tr2, sp, #640\t@ 0x280\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr0, #160\t@ 0xa0\n+\tcmp\tr0, #172\t@ 0xac\n \tmovs\tr4, r7\n \tldrb\tr6, [r2, #29]\n \tlsls\tr0, r1, #1\n \tadd\tr2, sp, #392\t@ 0x188\n \tlsls\tr0, r1, #1\n \tldr\tr6, [r4, #60]\t@ 0x3c\n \tlsls\tr0, r1, #1\n \tldrb\tr4, [r6, #20]\n \tlsls\tr0, r1, #1\n \tadd\tr0, sp, #256\t@ 0x100\n \tlsls\tr0, r1, #1\n-\tmovs\tr6, #56\t@ 0x38\n+\tmovs\tr6, #68\t@ 0x44\n \tmovs\tr4, r7\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tmovs\tr5, #158\t@ 0x9e\n+\tmovs\tr5, #170\t@ 0xaa\n \tmovs\tr4, r7\n-\tmovs\tr5, #154\t@ 0x9a\n+\tmovs\tr5, #166\t@ 0xa6\n \tmovs\tr4, r7\n-\tmovs\tr5, #236\t@ 0xec\n+\tmovs\tr5, #248\t@ 0xf8\n \tmovs\tr4, r7\n-\tmovs\tr5, #192\t@ 0xc0\n+\tmovs\tr5, #204\t@ 0xcc\n \tmovs\tr4, r7\n-\tmovs\tr4, #118\t@ 0x76\n+\tmovs\tr4, #130\t@ 0x82\n \tmovs\tr4, r7\n-\tmovs\tr4, #110\t@ 0x6e\n+\tmovs\tr4, #122\t@ 0x7a\n \tmovs\tr4, r7\n-\tmovs\tr4, #126\t@ 0x7e\n+\tmovs\tr4, #138\t@ 0x8a\n \tmovs\tr4, r7\n-\tmovs\tr4, #122\t@ 0x7a\n+\tmovs\tr4, #134\t@ 0x86\n \tmovs\tr4, r7\n MiraBait::saveWQueueElement(MiraBait::wqueueunit_t&):\n ./src/modules/mod_bait.C:421\n \tldr\tr1, [pc, #768]\t@ (26b28 , std::allocator >::~basic_stringbuf()@@Base+0x11170>)\n \tldr\tr2, [pc, #772]\t@ (26b2c , std::allocator >::~basic_stringbuf()@@Base+0x11174>)\n \tadd\tr1, pc\n ./src/modules/mod_bait.C:424\n@@ -53302,17 +53302,17 @@\n \tlsls\tr0, r1, #1\n \tadd\tr4, pc, #624\t@ (adr r4, 26dc0 , std::allocator >::~basic_stringbuf()@@Base+0x11408>)\n \tlsls\tr0, r1, #1\n \tadd\tr4, pc, #424\t@ (adr r4, 26cfc , std::allocator >::~basic_stringbuf()@@Base+0x11344>)\n \tlsls\tr0, r1, #1\n \tstr\tr2, [r1, #96]\t@ 0x60\n \tlsls\tr0, r1, #1\n-\tmovs\tr1, #18\n+\tmovs\tr1, #30\n \tmovs\tr4, r7\n-\tmovs\tr1, #0\n+\tmovs\tr1, #12\n \tmovs\tr4, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const [clone .constprop.0]:\n ./src/modules/../../src/mira/stringcontainer.H:114\n@@ -53461,17 +53461,17 @@\n \tmovs\tr0, r0\n \tstr\tr0, [r5, #60]\t@ 0x3c\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tstr\tr6, [r7, #56]\t@ 0x38\n \tlsls\tr0, r1, #1\n-\tmovs\tr2, r4\n+\tmovs\tr6, r5\n \tmovs\tr4, r7\n-\tmovs\tr0, r4\n+\tmovs\tr4, r5\n \tmovs\tr4, r7\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -54218,30 +54218,30 @@\n \tmovs\tr0, r0\n \tstr\tr6, [r7, #24]\n \tlsls\tr0, r1, #1\n \tldr\tr6, [sp, #464]\t@ 0x1d0\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr2, r7, #3\n+\tadds\tr6, r0, #4\n \tmovs\tr4, r7\n-\tb.n\t269ac , std::allocator >::~basic_stringbuf()@@Base+0x10ff4>\n+\tb.n\t269bc , std::allocator >::~basic_stringbuf()@@Base+0x11004>\n \tmovs\tr6, r7\n-\t\t\t@ instruction: 0xf53c003e\n-\tsubs\tr4, #68\t@ 0x44\n+\tadc.w\tr0, r4, #12451840\t@ 0xbe0000\n+\tsubs\tr4, #80\t@ 0x50\n \tmovs\tr4, r7\n-\tadds\tr4, r3, #2\n+\tadds\tr0, r5, #2\n \tmovs\tr4, r7\n-\tsubs\tr3, #178\t@ 0xb2\n+\tsubs\tr3, #190\t@ 0xbe\n \tmovs\tr4, r7\n-\tadds\tr2, r7, #0\n+\tadds\tr6, r0, #1\n \tmovs\tr4, r7\n \tldrsh\tr0, [r7, r3]\n \tlsls\tr0, r1, #1\n-\tsubs\tr2, r5, r0\n+\tsubs\tr6, r6, r0\n \tmovs\tr4, r7\n MiraBait::mainMiraBait(int, char**):\n ./src/modules/mod_bait.C:683\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr6, [pc, #3036]\t@ 27d6c , std::allocator >::~basic_stringbuf()@@Base+0x123b4>\n \tvpush\t{d8}\n@@ -55839,15 +55839,15 @@\n \tlsls\tr0, r1, #1\n \tldr\tr3, [sp, #16]\n \tlsls\tr0, r1, #1\n \tldr\tr3, [sp, #8]\n \tlsls\tr0, r1, #1\n \tstrb\tr4, [r1, #0]\n \tlsls\tr0, r1, #1\n-\tadds\tr2, r6, r6\n+\tadds\tr6, r7, r6\n \tmovs\tr4, r7\n \tlsrs\tr4, r6, #28\n \tmovs\tr0, r0\n \tldr\tr1, [sp, #288]\t@ 0x120\n \tlsls\tr0, r1, #1\n \tldr\tr1, [sp, #104]\t@ 0x68\n \tlsls\tr0, r1, #1\n@@ -55887,45 +55887,45 @@\n \tlsls\tr0, r1, #1\n \tldr\tr0, [r1, #48]\t@ 0x30\n \tlsls\tr0, r1, #1\n \tstr\tr5, [sp, #880]\t@ 0x370\n \tlsls\tr0, r1, #1\n \tstr\tr5, [sp, #360]\t@ 0x168\n \tlsls\tr0, r1, #1\n-\tasrs\tr2, r5, #17\n+\tasrs\tr6, r6, #17\n \tmovs\tr4, r7\n-\tasrs\tr2, r6, #16\n+\tasrs\tr6, r7, #16\n \tmovs\tr4, r7\n \tstr\tr4, [sp, #992]\t@ 0x3e0\n \tlsls\tr0, r1, #1\n \tldr\tr2, [r0, #24]\n \tlsls\tr0, r1, #1\n \tstr\tr4, [sp, #608]\t@ 0x260\n \tlsls\tr0, r1, #1\n-\tasrs\tr6, r3, #15\n+\tasrs\tr2, r5, #15\n \tmovs\tr4, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr4, r0, #15\n+\tasrs\tr0, r2, #15\n \tmovs\tr4, r7\n-\tasrs\tr6, r3, #15\n+\tasrs\tr2, r5, #15\n \tmovs\tr4, r7\n \tstr\tr4, [sp, #360]\t@ 0x168\n \tlsls\tr0, r1, #1\n-\tasrs\tr0, r0, #15\n+\tasrs\tr4, r1, #15\n \tmovs\tr4, r7\n \tldr\tr4, [r3, #16]\n \tlsls\tr0, r1, #1\n-\tasrs\tr2, r5, #14\n+\tasrs\tr6, r6, #14\n \tmovs\tr4, r7\n-\tasrs\tr0, r4, #14\n+\tasrs\tr4, r5, #14\n \tmovs\tr4, r7\n \tstr\tr4, [sp, #48]\t@ 0x30\n \tlsls\tr0, r1, #1\n-\tldc\t0, cr0, [r2], #-236\t@ 0xffffff14\n+\tldc\t0, cr0, [lr], #-236\t@ 0xffffff14\n \tstr\tr3, [sp, #960]\t@ 0x3c0\n \tlsls\tr0, r1, #1\n \tstr\tr3, [sp, #792]\t@ 0x318\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r3, #32\n \tmovs\tr0, r0\n \tstr\tr3, [sp, #672]\t@ 0x2a0\n@@ -55948,31 +55948,31 @@\n \tlsls\tr0, r1, #1\n \tstr\tr1, [sp, #520]\t@ 0x208\n \tlsls\tr0, r1, #1\n \tstr\tr2, [r3, #100]\t@ 0x64\n \tlsls\tr0, r1, #1\n \tstr\tr1, [sp, #416]\t@ 0x1a0\n \tlsls\tr0, r1, #1\n-\tasrs\tr6, r2, #14\n+\tasrs\tr2, r4, #14\n \tmovs\tr4, r7\n \tstr\tr0, [sp, #800]\t@ 0x320\n \tlsls\tr0, r1, #1\n \tstr\tr0, [sp, #656]\t@ 0x290\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrb\tr4, [r0, r3]\n+\tstrb\tr4, [r1, r3]\n \tmovs\tr5, r7\n-\tasrs\tr6, r6, #8\n+\tasrs\tr2, r0, #9\n \tmovs\tr4, r7\n \tstr\tr0, [sp, #344]\t@ 0x158\n \tlsls\tr0, r1, #1\n-\tasrs\tr0, r1, #12\n+\tasrs\tr4, r2, #12\n \tmovs\tr4, r7\n-\tasrs\tr6, r1, #12\n+\tasrs\tr2, r3, #12\n \tmovs\tr4, r7\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #228]\t@ 0xe4\n /usr/include/c++/10/bits/basic_string.h:231\n \tcmp\tr0, r6\n \tbeq.n\t27e9e , std::allocator >::~basic_stringbuf()@@Base+0x124e6>\n /usr/include/c++/10/bits/basic_string.h:237\n@@ -56592,99 +56592,99 @@\n \tcmn\tr0, r1\n \tldrh\tr0, [r1, #54]\t@ 0x36\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tstr\tr4, [r1, #56]\t@ 0x38\n \tlsls\tr0, r1, #1\n-\tasrs\tr4, r2, #7\n+\tasrs\tr0, r4, #7\n \tmovs\tr4, r7\n \tstr\tr4, [r5, #52]\t@ 0x34\n \tlsls\tr0, r1, #1\n-\tasrs\tr6, r3, #7\n+\tasrs\tr2, r5, #7\n \tmovs\tr4, r7\n \tldrh\tr0, [r6, #50]\t@ 0x32\n \tlsls\tr0, r1, #1\n \tldrh\tr6, [r1, #50]\t@ 0x32\n \tlsls\tr0, r1, #1\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tldrh\tr0, [r2, #48]\t@ 0x30\n \tlsls\tr0, r1, #1\n-\tasrs\tr2, r6, #10\n+\tasrs\tr6, r7, #10\n \tmovs\tr4, r7\n-\tasrs\tr6, r3, #13\n+\tasrs\tr2, r5, #13\n \tmovs\tr4, r7\n \tldrh\tr4, [r5, #44]\t@ 0x2c\n \tlsls\tr0, r1, #1\n-\tasrs\tr4, r7, #13\n+\tasrs\tr0, r1, #14\n \tmovs\tr4, r7\n \tldrh\tr0, [r1, #44]\t@ 0x2c\n \tlsls\tr0, r1, #1\n-\tasrs\tr4, r7, #13\n+\tasrs\tr0, r1, #14\n \tmovs\tr4, r7\n \tldrh\tr6, [r4, #42]\t@ 0x2a\n \tlsls\tr0, r1, #1\n-\tbcc.n\t28440 , std::allocator >::~basic_stringbuf()@@Base+0x12a88>\n+\tbcc.n\t28450 , std::allocator >::~basic_stringbuf()@@Base+0x12a98>\n \tmovs\tr6, r7\n \tldrh\tr0, [r0, #42]\t@ 0x2a\n \tlsls\tr0, r1, #1\n-\tasrs\tr6, r1, #12\n+\tasrs\tr2, r3, #12\n \tmovs\tr4, r7\n-\tasrs\tr6, r0, #12\n+\tasrs\tr2, r2, #12\n \tmovs\tr4, r7\n \tldrh\tr2, [r3, #38]\t@ 0x26\n \tlsls\tr0, r1, #1\n-\tbcs.n\t2833c , std::allocator >::~basic_stringbuf()@@Base+0x12984>\n+\tbcs.n\t2834c , std::allocator >::~basic_stringbuf()@@Base+0x12994>\n \tmovs\tr6, r7\n \tldrh\tr2, [r6, #36]\t@ 0x24\n \tlsls\tr0, r1, #1\n-\tasrs\tr0, r0, #10\n+\tasrs\tr4, r1, #10\n \tmovs\tr4, r7\n-\tasrs\tr0, r1, #10\n+\tasrs\tr4, r2, #10\n \tmovs\tr4, r7\n \tldrh\tr4, [r1, #34]\t@ 0x22\n \tlsls\tr0, r1, #1\n-\tbcs.n\t28434 , std::allocator >::~basic_stringbuf()@@Base+0x12a7c>\n+\tbcs.n\t28444 , std::allocator >::~basic_stringbuf()@@Base+0x12a8c>\n \tmovs\tr6, r7\n \tldrh\tr4, [r4, #32]\n \tlsls\tr0, r1, #1\n-\tasrs\tr6, r6, #7\n+\tasrs\tr2, r0, #8\n \tmovs\tr4, r7\n-\tasrs\tr2, r2, #8\n+\tasrs\tr6, r3, #8\n \tmovs\tr4, r7\n \tldrh\tr2, [r0, #30]\n \tlsls\tr0, r1, #1\n-\tbne.n\t28334 , std::allocator >::~basic_stringbuf()@@Base+0x1297c>\n+\tbne.n\t28344 , std::allocator >::~basic_stringbuf()@@Base+0x1298c>\n \tmovs\tr6, r7\n \tldrh\tr2, [r3, #28]\n \tlsls\tr0, r1, #1\n-\tasrs\tr4, r5, #5\n+\tasrs\tr0, r7, #5\n \tmovs\tr4, r7\n \tldrh\tr6, [r0, #26]\n \tlsls\tr0, r1, #1\n \tldr\tr4, [pc, #960]\t@ (287e8 , std::allocator >::~basic_stringbuf()@@Base+0x12e30>)\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r2, #22]\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsrs\tr6, r0, #22\n+\tlsrs\tr2, r2, #22\n \tmovs\tr4, r7\n-\tlsrs\tr6, r1, #22\n+\tlsrs\tr2, r3, #22\n \tmovs\tr4, r7\n \tldrh\tr6, [r6, #16]\n \tlsls\tr0, r1, #1\n-\tlsrs\tr4, r7, #21\n+\tlsrs\tr0, r1, #22\n \tmovs\tr4, r7\n \tldrsh\tr0, [r3, r3]\n \tlsls\tr0, r1, #1\n-\tlsrs\tr2, r0, #22\n+\tlsrs\tr6, r1, #22\n \tmovs\tr4, r7\n /usr/include/c++/10/ostream:611\n \tldr.w\tr7, [pc, #1648]\t@ 28ac0 , std::allocator >::~basic_stringbuf()@@Base+0x13108>\n \tmovs\tr2, #33\t@ 0x21\n \tldr\tr1, [sp, #12]\n \tldr\tr4, [r1, r7]\n \tldr.w\tr1, [pc, #1644]\t@ 28ac4 , std::allocator >::~basic_stringbuf()@@Base+0x1310c>\n@@ -57575,107 +57575,107 @@\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t289a4 , std::allocator >::~basic_stringbuf()@@Base+0x12fec>\n \tb.n\t28ab4 , std::allocator >::~basic_stringbuf()@@Base+0x130fc>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr4, r4, #16\n+\tlsrs\tr0, r6, #16\n \tmovs\tr4, r7\n \tldrh\tr2, [r6, #6]\n \tlsls\tr0, r1, #1\n-\tlsrs\tr4, r3, #16\n+\tlsrs\tr0, r5, #16\n \tmovs\tr4, r7\n \tldrh\tr0, [r1, #6]\n \tlsls\tr0, r1, #1\n-\tlsrs\tr0, r2, #20\n+\tlsrs\tr4, r3, #20\n \tmovs\tr4, r7\n \tldrh\tr0, [r4, #4]\n \tlsls\tr0, r1, #1\n-\tldr\tr4, [pc, #872]\t@ (28e48 )\n+\tldr\tr4, [pc, #904]\t@ (28e68 )\n \tmovs\tr5, r7\n \tldrh\tr6, [r7, #2]\n \tlsls\tr0, r1, #1\n-\tlsrs\tr2, r3, #24\n+\tlsrs\tr6, r4, #24\n \tmovs\tr4, r7\n \tldrh\tr6, [r0, #2]\n \tlsls\tr0, r1, #1\n-\tlsrs\tr2, r4, #25\n+\tlsrs\tr6, r5, #25\n \tmovs\tr4, r7\n \tstrh\tr6, [r7, #62]\t@ 0x3e\n \tlsls\tr0, r1, #1\n-\tlsrs\tr4, r4, #25\n+\tlsrs\tr0, r6, #25\n \tmovs\tr4, r7\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsrs\tr0, r7, #9\n-\tmovs\tr4, r7\n \tlsrs\tr4, r0, #10\n \tmovs\tr4, r7\n-\tmovs\tr4, r5\n+\tlsrs\tr0, r2, #10\n+\tmovs\tr4, r7\n+\tmovs\tr4, r6\n \tmovs\tr5, r7\n \tstrh\tr6, [r7, #58]\t@ 0x3a\n \tlsls\tr0, r1, #1\n-\tlsls\tr2, r4, #27\n+\tlsls\tr6, r5, #27\n \tmovs\tr4, r7\n \tstrh\tr6, [r0, #58]\t@ 0x3a\n \tlsls\tr0, r1, #1\n-\tlsls\tr6, r6, #28\n+\tlsls\tr2, r0, #29\n \tmovs\tr4, r7\n-\tlsrs\tr0, r4, #32\n+\tlsrs\tr4, r5, #32\n \tmovs\tr4, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr0, r3, #12\n+\tlsrs\tr4, r4, #12\n \tmovs\tr4, r7\n-\tlsrs\tr4, r2, #12\n+\tlsrs\tr0, r4, #12\n \tmovs\tr4, r7\n-\tlsls\tr6, r2, #30\n+\tlsls\tr2, r4, #30\n \tmovs\tr4, r7\n-\tlsrs\tr0, r7, #9\n+\tlsrs\tr4, r0, #10\n \tmovs\tr4, r7\n-\tldr\tr2, [pc, #144]\t@ (28bc8 )\n+\tldr\tr2, [pc, #176]\t@ (28be8 )\n \tmovs\tr5, r7\n-\tlsrs\tr2, r2, #1\n+\tlsrs\tr6, r3, #1\n \tmovs\tr4, r7\n-\tlsls\tr0, r3, #13\n+\tlsls\tr4, r4, #13\n \tmovs\tr4, r7\n-\tlsls\tr4, r0, #29\n+\tlsls\tr0, r2, #29\n \tmovs\tr4, r7\n-\tlsls\tr6, r7, #28\n+\tlsls\tr2, r1, #29\n \tmovs\tr4, r7\n-\tlsrs\tr4, r7, #4\n+\tlsrs\tr0, r1, #5\n \tmovs\tr4, r7\n \tstrh\tr0, [r5, #42]\t@ 0x2a\n \tlsls\tr0, r1, #1\n-\tlsrs\tr4, r0, #5\n+\tlsrs\tr0, r2, #5\n \tmovs\tr4, r7\n-\tlsrs\tr0, r4, #5\n+\tlsrs\tr4, r5, #5\n \tmovs\tr4, r7\n-\tlsls\tr6, r0, #26\n+\tlsls\tr2, r2, #26\n \tmovs\tr4, r7\n-\tlsls\tr2, r1, #10\n+\tlsls\tr6, r2, #10\n \tmovs\tr4, r7\n-\tlsls\tr0, r3, #15\n+\tlsls\tr4, r4, #15\n \tmovs\tr4, r7\n \tbge.n\t28b08 , std::allocator >::~basic_stringbuf()@@Base+0x13150>\n \tmovs\tr3, r7\n \tbvs.n\t28af0 , std::allocator >::~basic_stringbuf()@@Base+0x13138>\n \tmovs\tr3, r7\n \tbvs.n\t28ac0 , std::allocator >::~basic_stringbuf()@@Base+0x13108>\n \tmovs\tr3, r7\n boost::system::detail::generic_error_category::name() const:\n /usr/include/boost/system/error_code.hpp:293\n \tldr\tr0, [pc, #4]\t@ (28b78 , std::allocator >::~basic_stringbuf()@@Base+0x131c0>)\n \tadd\tr0, pc\n \tbx\tlr\n \tnop\n-\tstc\t0, cr0, [lr], #-236\t@ 0xffffff14\n+\tldc\t0, cr0, [sl], #-236\t@ 0xffffff14\n \n 00028b7c :\n boost::system::error_category::equivalent(boost::system::error_code const&, int) const:\n /usr/include/boost/system/error_code.hpp:632\n \tldr\tr3, [r1, #8]\n /usr/include/boost/system/error_code.hpp:842\n \tpush\t{r4, r5, r6}\n@@ -57803,17 +57803,17 @@\n \tldr\tr1, [pc, #16]\t@ (28c44 )\n \tldr\tr0, [pc, #20]\t@ (28c48 )\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tsbcs.w\tr0, r4, fp, rrx\n-\t\t\t@ instruction: 0xeb8a003b\n-\tsubs.w\tr0, r4, fp, rrx\n+\t\t\t@ instruction: 0xeb80003b\n+\t\t\t@ instruction: 0xeb96003b\n+\trsb\tr0, r0, fp, rrx\n \n 00028c4c :\n boost::system::detail::generic_error_category::message(int, char*, unsigned int) const:\n /usr/include/boost/system/error_code.hpp:913\n \tmov\tr0, r1\n /usr/include/boost/system/detail/generic_category.hpp:37\n \tmov\tr1, r2\n@@ -59836,17 +59836,17 @@\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr5, #86\t@ 0x56\n \tlsls\tr0, r1, #1\n \tadds\tr5, #58\t@ 0x3a\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xfab2003b\n-\t\t\t@ instruction: 0xfaae003b\n-\tasrs\tr6, r5, #3\n+\t\t\t@ instruction: 0xfabe003b\n+\t\t\t@ instruction: 0xfaba003b\n+\tasrs\tr6, r6, #3\n \tmovs\tr6, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -60007,17 +60007,17 @@\n \tmovs\tr0, r0\n \tadds\tr4, #44\t@ 0x2c\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tadds\tr4, #4\n \tlsls\tr0, r1, #1\n+\tldrsh.w\tr0, [r4, #59]\t@ 0x3b\n \tvld1.8\t\t\t@ instruction: 0xf9a8003b\n-\tldrsb.w\tr0, [ip, #59]\t@ 0x3b\n-\tmovs\tr1, #108\t@ 0x6c\n+\tmovs\tr1, #116\t@ 0x74\n \tmovs\tr6, r7\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -60265,17 +60265,17 @@\n \tlsls\tr0, r1, #1\n \tcmp\tr8, r1\n \tlsls\tr0, r1, #1\n \tstrb\tr2, [r4, #2]\n \tlsls\tr0, r1, #1\n \tcmp\tr4, sp\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xf79c003b\n-\t\t\t@ instruction: 0xf798003b\n-\tlsrs\tr0, r3, #23\n+\t\t\t@ instruction: 0xf7a8003b\n+\t\t\t@ instruction: 0xf7a4003b\n+\tlsrs\tr0, r4, #23\n \tmovs\tr6, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -60525,17 +60525,17 @@\n \tlsls\tr0, r1, #1\n \tbics\tr0, r1\n \tlsls\tr0, r1, #1\n \tldr\tr2, [r4, #104]\t@ 0x68\n \tlsls\tr0, r1, #1\n \tmuls\tr4, r5\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xf59c003b\n-\t\t\t@ instruction: 0xf598003b\n-\tlsrs\tr0, r3, #15\n+\tsub.w\tr0, r8, #12255232\t@ 0xbb0000\n+\tsub.w\tr0, r4, #12255232\t@ 0xbb0000\n+\tlsrs\tr0, r4, #15\n \tmovs\tr6, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -60785,17 +60785,17 @@\n \tlsls\tr0, r1, #1\n \tsbcs\tr0, r1\n \tlsls\tr0, r1, #1\n \tldr\tr2, [r4, #72]\t@ 0x48\n \tlsls\tr0, r1, #1\n \tadcs\tr4, r5\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xf39c003b\n-\t\t\t@ instruction: 0xf398003b\n-\tlsrs\tr0, r3, #7\n+\t\t\t@ instruction: 0xf3a8003b\n+\t\t\t@ instruction: 0xf3a4003b\n+\tlsrs\tr0, r4, #7\n \tmovs\tr6, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -61045,17 +61045,17 @@\n \tlsls\tr0, r1, #1\n \tsubs\tr7, #136\t@ 0x88\n \tlsls\tr0, r1, #1\n \tldr\tr2, [r4, #40]\t@ 0x28\n \tlsls\tr0, r1, #1\n \tsubs\tr7, #108\t@ 0x6c\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xf19c003b\n-\t\t\t@ instruction: 0xf198003b\n-\tlsls\tr0, r3, #31\n+\tsub.w\tr0, r8, #59\t@ 0x3b\n+\tsub.w\tr0, r4, #59\t@ 0x3b\n+\tlsls\tr0, r4, #31\n \tmovs\tr6, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -61236,15 +61236,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t2a584 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0xac>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2a5a4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0xcc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstmia\tr6!, {r3, r7}\n+\tstmia\tr6!, {r2, r4, r7}\n \tmovs\tr3, r7\n std::__cxx11::list >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/list.tcc:217\n \tcmp\tr1, #0\n \tbeq.n\t2a68e >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x1b6>\n /usr/include/c++/10/bits/list.tcc:211\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -62176,15 +62176,15 @@\n \tmovw\tr7, #65528\t@ 0xfff8\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t2abd2 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x6fa>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2abf8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x720>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldrd\tr0, r0, [lr, #-236]\t@ 0xec\n+\tstrd\tr0, r0, [sl, #-236]!\t@ 0xec\n bool boost::io::detail::quoted_put >(std::basic_streambuf >&, char const*, unsigned int, unsigned int, char, char):\n /usr/include/boost/io/quoted.hpp:66\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r1\n \tmov\tr8, r2\n /usr/include/c++/10/streambuf:434\n \tldrd\tr2, r1, [r0, #20]\n@@ -63290,15 +63290,15 @@\n \tblx\tb684 \n \tb.n\t2b348 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0xe70>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2b424 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0xf4c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tb.n\t2b6c8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x11f0>\n+\tb.n\t2b6e0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x1208>\n \tmovs\tr3, r7\n void MiraBait::parallelBaitReads >(HashStatistics >&, ReadPool const&, std::vector >&):\n ./src/modules/mod_bait.C:391\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr\tr4, [pc, #680]\t@ (2b6d8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x1200>)\n \tsub\tsp, #252\t@ 0xfc\n@@ -63655,19 +63655,19 @@\n \tldr\tr2, [r1, r0]\n \tlsls\tr0, r1, #1\n \tstmia.w\tr5, {r0, r1, r2, r3, r4, r5, r6, r7, r8, r9, sl, fp, ip, sp, lr, pc}\n \tadds\tr0, r6, r5\n \tlsls\tr0, r1, #1\n \tldrsb\tr0, [r4, r5]\n \tlsls\tr0, r1, #1\n-\tudf\t#216\t@ 0xd8\n+\tudf\t#228\t@ 0xe4\n \tmovs\tr3, r7\n-\tudf\t#212\t@ 0xd4\n+\tudf\t#224\t@ 0xe0\n \tmovs\tr3, r7\n-\tadds.w\tr0, r4, #12386304\t@ 0xbd0000\n+\tadds.w\tr0, ip, #12386304\t@ 0xbd0000\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n void MiraBait::doBaitWithHS >(HashStatistics >&):\n@@ -64513,31 +64513,31 @@\n \tadd\tr5, pc, #172\t@ (adr r5, 2be68 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x1990>)\n \tvtbl.8\td17, {d15}, d20\n \tlsls\tr0, r1, #1\n \tadds\tr6, r1, r0\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tudf\t#12\n+\tudf\t#24\n \tmovs\tr3, r7\n-\tudf\t#20\n+\tudf\t#32\n \tmovs\tr3, r7\n \tstrb\tr2, [r6, r6]\n \tlsls\tr0, r1, #1\n \tasrs\tr6, r2, #30\n \tlsls\tr0, r1, #1\n \tcmp\tr2, #86\t@ 0x56\n \tlsls\tr0, r1, #1\n \tstrb\tr6, [r7, r4]\n \tlsls\tr0, r1, #1\n \tcmp\tr2, #22\n \tlsls\tr0, r1, #1\n \tstrb\tr2, [r2, r4]\n \tlsls\tr0, r1, #1\n-\tsvc\t78\t@ 0x4e\n+\tsvc\t90\t@ 0x5a\n \tmovs\tr3, r7\n \tstrb\tr2, [r6, r3]\n \tlsls\tr0, r1, #1\n \tstrb\tr2, [r3, r3]\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -64557,21 +64557,21 @@\n \tlsls\tr0, r1, #1\n \tstrh\tr2, [r3, r4]\n \tlsls\tr0, r1, #1\n \tstrh\tr0, [r7, r3]\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbgt.n\t2bea4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19cc>\n+\tbgt.n\t2bebc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19e4>\n \tmovs\tr3, r7\n-\tbgt.n\t2beb4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19dc>\n+\tbgt.n\t2becc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19f4>\n \tmovs\tr3, r7\n-\tbgt.n\t2be84 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19ac>\n+\tbgt.n\t2be9c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19c4>\n \tmovs\tr3, r7\n-\tbgt.n\t2be8c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19b4>\n+\tbgt.n\t2bea4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x19cc>\n \tmovs\tr3, r7\n \tlsls\tr4, r2, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -65908,89 +65908,89 @@\n \tb.n\t2c81a >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2342>\n \tb.n\t2c82c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2354>\n \tb.n\t2c81a >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2342>\n \tb.n\t2c82c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2354>\n \tnop\n \tldr\tr7, [pc, #144]\t@ (2c91c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2444>)\n \tlsls\tr0, r1, #1\n-\tbvc.n\t2c880 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x23a8>\n+\tbhi.n\t2c898 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x23c0>\n \tmovs\tr3, r7\n \tldr\tr6, [pc, #632]\t@ (2cb0c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2634>)\n \tlsls\tr0, r1, #1\n \tldr\tr6, [pc, #488]\t@ (2ca80 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x25a8>)\n \tlsls\tr0, r1, #1\n \tldr\tr6, [pc, #384]\t@ (2ca1c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2544>)\n \tlsls\tr0, r1, #1\n \tldr\tr6, [pc, #312]\t@ (2c9d8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2500>)\n \tlsls\tr0, r1, #1\n-\tbge.n\t2c978 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x24a0>\n+\tbge.n\t2c990 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x24b8>\n \tmovs\tr3, r7\n-\tbls.n\t2c7ec >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2314>\n+\tbls.n\t2c804 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x232c>\n \tmovs\tr3, r7\n \tlsls\tr4, r2, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbcc.n\t2c7e8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2310>\n+\tbcc.n\t2c800 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2328>\n \tmovs\tr3, r7\n-\tbcc.n\t2c7e0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2308>\n+\tbcc.n\t2c7f8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2320>\n \tmovs\tr3, r7\n-\tldrd\tr0, r0, [r0, #244]\t@ 0xf4\n+\tldrd\tr0, r0, [r8, #244]\t@ 0xf4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [pc, #416]\t@ (2ca68 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2590>)\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbmi.n\t2c954 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x247c>\n+\tbmi.n\t2c96c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2494>\n \tmovs\tr3, r7\n-\tadd\tr1, sp, #448\t@ 0x1c0\n+\tadd\tr1, sp, #496\t@ 0x1f0\n \tmovs\tr3, r7\n-\tadd\tr1, sp, #432\t@ 0x1b0\n+\tadd\tr1, sp, #480\t@ 0x1e0\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tbpl.n\t2c84c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2374>\n+\tbpl.n\t2c864 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x238c>\n \tmovs\tr3, r7\n-\tbeq.n\t2c93c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2464>\n+\tbeq.n\t2c954 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x247c>\n \tmovs\tr3, r7\n-\tbeq.n\t2c934 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x245c>\n+\tbeq.n\t2c94c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2474>\n \tmovs\tr3, r7\n-\tb.n\t2c5b8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x20e0>\n+\tb.n\t2c5c8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x20f0>\n \tmovs\tr5, r7\n-\tadd\tr6, pc, #520\t@ (adr r6, 2caf8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2620>)\n+\tadd\tr6, pc, #568\t@ (adr r6, 2cb28 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2650>)\n \tmovs\tr3, r7\n-\tadd\tr6, pc, #512\t@ (adr r6, 2caf4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x261c>)\n+\tadd\tr6, pc, #560\t@ (adr r6, 2cb24 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x264c>)\n \tmovs\tr3, r7\n-\tldmia\tr7, {r1, r2, r6, r7}\n+\tldmia\tr7, {r1, r4, r6, r7}\n \tmovs\tr3, r7\n-\tldmia\tr7, {r2, r4, r6, r7}\n+\tldmia\tr7, {r5, r6, r7}\n \tmovs\tr3, r7\n-\tldmia\tr7, {r1, r2, r4, r5, r6, r7}\n+\tbeq.n\t2c904 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x242c>\n \tmovs\tr3, r7\n-\tbcs.n\t2c954 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x247c>\n+\tbcs.n\t2c96c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2494>\n \tmovs\tr3, r7\n \tbx\tr5\n \tlsls\tr0, r1, #1\n-\tbcs.n\t2c9e4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x250c>\n+\tbcs.n\t2c9fc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2524>\n \tmovs\tr3, r7\n \tbx\tr1\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xf6b0003d\n-\tbcs.n\t2c82c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2354>\n+\t\t\t@ instruction: 0xf6b8003d\n+\tbcs.n\t2c844 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x236c>\n \tmovs\tr3, r7\n-\tbcs.n\t2c86c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2394>\n+\tbcs.n\t2c884 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x23ac>\n \tmovs\tr3, r7\n-\tbeq.n\t2ca10 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2538>\n+\tbeq.n\t2c828 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2350>\n \tmovs\tr3, r7\n \tcmp\tr8, sp\n \tlsls\tr0, r1, #1\n-\tbeq.n\t2c868 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2390>\n+\tbeq.n\t2c880 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x23a8>\n \tmovs\tr3, r7\n void MiraBait::parallelBaitReads >(HashStatistics >&, ReadPool const&, std::vector >&):\n ./src/modules/mod_bait.C:391\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr\tr4, [pc, #680]\t@ (2cbd8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2700>)\n \tsub\tsp, #252\t@ 0xfc\n@@ -66347,19 +66347,19 @@\n \torrs\tr2, r1\n \tlsls\tr0, r1, #1\n \tbvc.n\t2cafa >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2622>\n \tvsri.32\tq8, q8, #1\n \tlsls\tr0, r1, #1\n \tnegs\tr0, r4\n \tlsls\tr0, r1, #1\n-\tldmia\tr1!, {r3, r4, r6, r7}\n+\tldmia\tr1!, {r2, r5, r6, r7}\n \tmovs\tr3, r7\n-\tldmia\tr1!, {r2, r4, r6, r7}\n+\tldmia\tr1!, {r5, r6, r7}\n \tmovs\tr3, r7\n-\tb.n\t2cc2c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2754>\n+\tb.n\t2cc3c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x2764>\n \tmovs\tr5, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -67204,31 +67204,31 @@\n \tstr\tr0, [sp, #172]\t@ 0xac\n \tvsubw.u\tq8, , d20\n \tlsls\tr0, r1, #1\n \tlsls\tr6, r1, #12\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr1!, {r2, r3}\n+\tldmia\tr1!, {r3, r4}\n \tmovs\tr3, r7\n-\tldmia\tr1!, {r2, r4}\n+\tldmia\tr1!, {r5}\n \tmovs\tr3, r7\n \tlsls\tr2, r6\n \tlsls\tr0, r1, #1\n \tlsls\tr6, r2, #10\n \tlsls\tr0, r1, #1\n \tasrs\tr6, r2, #21\n \tlsls\tr0, r1, #1\n \tands\tr6, r7\n \tlsls\tr0, r1, #1\n \tasrs\tr6, r2, #20\n \tlsls\tr0, r1, #1\n \tands\tr2, r2\n \tlsls\tr0, r1, #1\n-\tldmia\tr2, {r1, r2, r3, r6}\n+\tldmia\tr2!, {r1, r3, r4, r6}\n \tmovs\tr3, r7\n \tsubs\tr7, #242\t@ 0xf2\n \tlsls\tr0, r1, #1\n \tsubs\tr7, #216\t@ 0xd8\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -67248,21 +67248,21 @@\n \tlsls\tr0, r1, #1\n \tsubs\tr6, #22\n \tlsls\tr0, r1, #1\n \tsubs\tr5, #244\t@ 0xf4\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r3, r4, r5}\n+\tstmia\tr7!, {r2, r6}\n \tmovs\tr3, r7\n-\tstmia\tr7!, {r6}\n+\tstmia\tr7!, {r2, r3, r6}\n \tmovs\tr3, r7\n-\tstmia\tr7!, {r1, r2, r5}\n+\tstmia\tr7!, {r1, r4, r5}\n \tmovs\tr3, r7\n-\tstmia\tr7!, {r1, r3, r5}\n+\tstmia\tr7!, {r1, r2, r4, r5}\n \tmovs\tr3, r7\n \tlsls\tr4, r2, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -68408,91 +68408,91 @@\n \tb.n\t2db70 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3698>\n \tb.n\t2db70 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3698>\n \tb.n\t2db88 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x36b0>\n \tb.n\t2db98 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x36c0>\n \tb.n\t2db70 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3698>\n \tsubs\tr2, #36\t@ 0x24\n \tlsls\tr0, r1, #1\n-\tstmia\tr6!, {r1, r2, r3, r5}\n+\tstmia\tr6!, {r1, r3, r4, r5}\n \tmovs\tr3, r7\n-\tstmia\tr5!, {r3, r5, r6}\n+\tstmia\tr5!, {r2, r4, r5, r6}\n \tmovs\tr3, r7\n \tlsls\tr4, r2, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r3, r4, r5, r6, r7}\n+\tstmia\tr2!, {r2}\n \tmovs\tr3, r7\n \tsubs\tr0, #156\t@ 0x9c\n \tlsls\tr0, r1, #1\n \tsubs\tr0, #120\t@ 0x78\n \tlsls\tr0, r1, #1\n \tsubs\tr0, #92\t@ 0x5c\n \tlsls\tr0, r1, #1\n \tsubs\tr0, #74\t@ 0x4a\n \tlsls\tr0, r1, #1\n-\titet\tpl\n+\tittt\tvs\n+\tmovvs\tr3, r7\n+\titt\tpl\t@ unpredictable \n \tmovpl\tr3, r7\n-\tsevlmi\n-\tmovpl\tr3, r7\n-\tbpl.n\t2db58 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3680>\n+\tbpl.n\t2db68 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3690>\t@ unpredictable \n \tmovs\tr5, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tadds\tr6, #212\t@ 0xd4\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\titee\tge\n-\tmovge\tr3, r7\n-\tstrlt\tr4, [sp, #880]\t@ 0x370\n+\titte\tlt\n \tmovlt\tr3, r7\n-\tstr\tr4, [sp, #864]\t@ 0x360\n+\tstrlt\tr4, [sp, #928]\t@ 0x3a0\n+\tmovge\tr3, r7\n+\tstr\tr4, [sp, #912]\t@ 0x390\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tpop\t{r1, r2, r4, r6, pc}\n+\tpop\t{r1, r5, r6, pc}\n \tmovs\tr3, r7\n-\tpop\t{r4, r6, pc}\n+\tpop\t{r2, r3, r4, r6, pc}\n \tmovs\tr3, r7\n-\tbcc.n\t2db80 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x36a8>\n+\tbcc.n\t2db90 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x36b8>\n \tmovs\tr5, r7\n-\tstr\tr3, [sp, #520]\t@ 0x208\n-\tmovs\tr3, r7\n-\tstr\tr3, [sp, #512]\t@ 0x200\n+\tstr\tr3, [sp, #568]\t@ 0x238\n \tmovs\tr3, r7\n-\tstmia\tr1!, {r1}\n+\tstr\tr3, [sp, #560]\t@ 0x230\n \tmovs\tr3, r7\n-\tnop\t{14}\n+\tstmia\tr1!, {r1, r2, r3}\n \tmovs\tr3, r7\n-\tstmia\tr0!, {}\n+\tite\tal\n+\tmoval\tr3, r7\n+\tstmia\tr0!, {r2, r3}\n \tmovs\tr3, r7\n-\tpop\t{r2, r4, r6, r7, pc}\n+\tpop\t{r5, r6, r7, pc}\n \tmovs\tr3, r7\n \tadds\tr3, #68\t@ 0x44\n \tlsls\tr0, r1, #1\n-\tpop\t{r2, r3, r4, r5, r6, r7, pc}\n+\tbkpt\t0x0008\n \tmovs\tr3, r7\n-\tcbnz\tr6, 2dcce >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x37f6>\n+\tcbnz\tr2, 2dcd2 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x37fa>\n \tmovs\tr3, r7\n-\tcbnz\tr4, 2dcd6 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x37fe>\n+\tcbnz\tr0, 2dcda >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3802>\n \tmovs\tr3, r7\n-\tcbnz\tr6, 2dce2 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x380a>\n+\tcbnz\tr2, 2dce6 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x380e>\n \tmovs\tr3, r7\n-\tpop\t{r2, r7, pc}\n+\tpop\t{r4, r7, pc}\n \tmovs\tr3, r7\n \tadds\tr2, #132\t@ 0x84\n \tlsls\tr0, r1, #1\n-\tpop\t{r3, r6, r7, pc}\n+\tpop\t{r2, r4, r6, r7, pc}\n \tmovs\tr3, r7\n \tadds\tr2, #100\t@ 0x64\n \tlsls\tr0, r1, #1\n-\tb.n\t2e0bc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3be4>\n+\tb.n\t2e0cc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3bf4>\n \tmovs\tr5, r7\n void MiraBait::parallelBaitReads(HashStatistics&, ReadPool const&, std::vector >&):\n ./src/modules/mod_bait.C:391\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr\tr4, [pc, #680]\t@ (2df54 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x3a7c>)\n \tsub\tsp, #252\t@ 0xfc\n@@ -68847,19 +68847,19 @@\n \tcmp\tr7, #142\t@ 0x8e\n \tlsls\tr0, r1, #1\n \tstmia\tr2!, {r0, r3}\n \tvshr.u64\t, q10, #1\n \tlsls\tr7, r0, #1\n \tcmp\tr6, #228\t@ 0xe4\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xb65c\n+\t\t\t@ instruction: 0xb668\n \tmovs\tr3, r7\n-\tsetend\tbe\n+\tcpsie\ta\n \tmovs\tr3, r7\n-\tldmia\tr4, {r3, r4, r7}\n+\tldmia\tr4!, {r5, r7}\n \tmovs\tr5, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -69707,30 +69707,30 @@\n \tmovs\tr0, r0\n \tldrb\tr3, [r5, #18]\n \t\t\t@ instruction: 0xffffefa4\n \tlsls\tr7, r0, #1\n \tvmla.i\td0, d14, d3[1]\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tpush\t{r2, r3, r7, lr}\n+\tpush\t{r3, r4, r7, lr}\n \tmovs\tr3, r7\n-\tpush\t{r2, r4, r7, lr}\n+\tpush\t{r5, r7, lr}\n \tmovs\tr3, r7\n \tcmp\tr5, #50\t@ 0x32\n \tlsls\tr0, r1, #1\n \tvhadd.s16\tq0, q3, \n \tlsls\tr6, r2, #7\n \tlsls\tr0, r1, #1\n \tcmp\tr4, #190\t@ 0xbe\n \tlsls\tr0, r1, #1\n \tlsls\tr6, r2, #6\n \tlsls\tr0, r1, #1\n \tcmp\tr4, #146\t@ 0x92\n \tlsls\tr0, r1, #1\n-\t\t\t@ instruction: 0xb6ce\n+\t\t\t@ instruction: 0xb6da\n \tmovs\tr3, r7\n \tcmp\tr4, #114\t@ 0x72\n \tlsls\tr0, r1, #1\n \tcmp\tr4, #90\t@ 0x5a\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -69750,21 +69750,21 @@\n \tlsls\tr0, r1, #1\n \tcmp\tr2, #154\t@ 0x9a\n \tlsls\tr0, r1, #1\n \tcmp\tr2, #120\t@ 0x78\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tcbz\tr0, 2e714 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x423c>\n+\tcbz\tr4, 2e716 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x423e>\n \tmovs\tr3, r7\n-\tcbz\tr6, 2e718 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4240>\n+\tcbz\tr2, 2e71c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4244>\n \tmovs\tr3, r7\n-\tcbz\tr4, 2e716 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x423e>\n+\tcbz\tr0, 2e71a >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4242>\n \tmovs\tr3, r7\n-\tcbz\tr6, 2e71a >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4242>\n+\tcbz\tr2, 2e71e >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4246>\n \tmovs\tr3, r7\n \tlsrs\tr0, r7, #19\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -71101,91 +71101,91 @@\n \tb.n\t2f09a >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4bc2>\n \tb.n\t2f0ac >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4bd4>\n \tb.n\t2f09a >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4bc2>\n \tb.n\t2f0ac >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4bd4>\n \tnop\n \tmovs\tr6, #164\t@ 0xa4\n \tlsls\tr0, r1, #1\n-\tadd\tr7, sp, #480\t@ 0x1e0\n+\tadd\tr7, sp, #528\t@ 0x210\n \tmovs\tr3, r7\n \tmovs\tr6, #30\n \tlsls\tr0, r1, #1\n \tmovs\tr5, #250\t@ 0xfa\n \tlsls\tr0, r1, #1\n \tmovs\tr5, #224\t@ 0xe0\n \tlsls\tr0, r1, #1\n \tmovs\tr5, #206\t@ 0xce\n \tlsls\tr0, r1, #1\n-\tcbz\tr2, 2f15e >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4c86>\n+\tcbz\tr6, 2f160 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4c88>\n \tmovs\tr3, r7\n-\tcbz\tr2, 2f130 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4c58>\n+\tcbz\tr6, 2f132 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4c5a>\n \tmovs\tr3, r7\n \tlsrs\tr0, r7, #19\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #96\t@ 0x60\n+\tadd\tr3, sp, #144\t@ 0x90\n \tmovs\tr3, r7\n-\tadd\tr3, sp, #72\t@ 0x48\n+\tadd\tr3, sp, #120\t@ 0x78\n \tmovs\tr3, r7\n-\tstmia\tr1!, {r4, r6}\n+\tstmia\tr1!, {r3, r4, r6}\n \tmovs\tr5, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr2, #232\t@ 0xe8\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #776\t@ 0x308\n+\tadd\tr3, sp, #824\t@ 0x338\n \tmovs\tr3, r7\n-\tstrh\tr0, [r6, #6]\n+\tstrh\tr4, [r7, #6]\n \tmovs\tr3, r7\n-\tstrh\tr4, [r5, #6]\n+\tstrh\tr0, [r7, #6]\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #216\t@ 0xd8\n+\tadd\tr5, sp, #264\t@ 0x108\n \tmovs\tr3, r7\n-\tadd\tr7, pc, #688\t@ (adr r7, 2f414 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4f3c>)\n+\tadd\tr7, pc, #736\t@ (adr r7, 2f444 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4f6c>)\n \tmovs\tr3, r7\n-\tadd\tr7, pc, #664\t@ (adr r7, 2f400 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4f28>)\n+\tadd\tr7, pc, #712\t@ (adr r7, 2f430 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4f58>)\n \tmovs\tr3, r7\n-\tpop\t{r1, r2, r5, r6, r7, pc}\n+\tpop\t{r1, r2, r3, r5, r6, r7, pc}\n \tmovs\tr5, r7\n-\tldrb\tr2, [r0, #24]\n+\tldrb\tr6, [r1, #24]\n \tmovs\tr3, r7\n-\tldrb\tr0, [r0, #24]\n+\tldrb\tr4, [r1, #24]\n \tmovs\tr3, r7\n-\tadd\tr7, pc, #280\t@ (adr r7, 2f290 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4db8>)\n+\tadd\tr7, pc, #328\t@ (adr r7, 2f2c0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4de8>)\n \tmovs\tr3, r7\n-\tadd\tr7, pc, #336\t@ (adr r7, 2f2cc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4df4>)\n+\tadd\tr7, pc, #384\t@ (adr r7, 2f2fc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4e24>)\n \tmovs\tr3, r7\n-\tadd\tr7, pc, #472\t@ (adr r7, 2f358 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4e80>)\n+\tadd\tr7, pc, #520\t@ (adr r7, 2f388 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4eb0>)\n \tmovs\tr3, r7\n-\tadd\tr1, sp, #672\t@ 0x2a0\n+\tadd\tr1, sp, #720\t@ 0x2d0\n \tmovs\tr3, r7\n \tsubs\tr0, r5, #2\n \tlsls\tr0, r1, #1\n-\tadd\tr1, sp, #944\t@ 0x3b0\n+\tadd\tr1, sp, #992\t@ 0x3e0\n \tmovs\tr3, r7\n \tsubs\tr0, r1, #2\n \tlsls\tr0, r1, #1\n-\tldmia\tr6!, {r4, r5}\n+\tldmia\tr6!, {r3, r4, r5}\n \tmovs\tr5, r7\n-\tadd\tr2, sp, #40\t@ 0x28\n+\tadd\tr2, sp, #88\t@ 0x58\n \tmovs\tr3, r7\n-\tadd\tr2, sp, #160\t@ 0xa0\n+\tadd\tr2, sp, #208\t@ 0xd0\n \tmovs\tr3, r7\n-\tadd\tr7, pc, #992\t@ (adr r7, 2f580 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x50a8>)\n+\tadd\tr0, sp, #16\n \tmovs\tr3, r7\n \tadds\tr0, r5, #5\n \tlsls\tr0, r1, #1\n-\tadd\tr0, sp, #128\t@ 0x80\n+\tadd\tr0, sp, #176\t@ 0xb0\n \tmovs\tr3, r7\n void MiraBait::parallelBaitReads >(HashStatistics >&, ReadPool const&, std::vector >&):\n ./src/modules/mod_bait.C:391\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr\tr4, [pc, #680]\t@ (2f458 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x4f80>)\n \tsub\tsp, #252\t@ 0xfc\n@@ -71542,19 +71542,19 @@\n \tsubs\tr2, r1, r2\n \tlsls\tr0, r1, #1\n \tadd\tr1, sp, #20\n \t\t\t@ instruction: 0xffffdbf0\n \tlsls\tr7, r0, #1\n \tadds\tr0, r4, r7\n \tlsls\tr0, r1, #1\n-\tadd\tr1, pc, #352\t@ (adr r1, 2f5dc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5104>)\n+\tadd\tr1, pc, #400\t@ (adr r1, 2f60c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5134>)\n \tmovs\tr3, r7\n-\tadd\tr1, pc, #336\t@ (adr r1, 2f5d0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x50f8>)\n+\tadd\tr1, pc, #384\t@ (adr r1, 2f600 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5128>)\n \tmovs\tr3, r7\n-\t\t\t@ instruction: 0xb794\n+\t\t\t@ instruction: 0xb79c\n \tmovs\tr5, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -72408,29 +72408,29 @@\n \tstr\tr3, [r5, #120]\t@ 0x78\n \tvtbl.8\td29, {d31- >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x55a0>\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #560\t@ (adr r0, 2fd94 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x58bc>)\n+\tadd\tr0, pc, #608\t@ (adr r0, 2fdc4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x58ec>)\n \tmovs\tr3, r7\n-\tadd\tr0, pc, #592\t@ (adr r0, 2fdb8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x58e0>)\n+\tadd\tr0, pc, #640\t@ (adr r0, 2fde8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5910>)\n \tmovs\tr3, r7\n \tadds\tr2, r6, r0\n \tlsls\tr0, r1, #1\n \tbge.n\t2fb9c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x56c4>\n \tlsls\tr7, r0, #1\n \tldcl\t0, cr0, [r6], {71}\t@ 0x47\n \tasrs\tr6, r7, #30\n \tlsls\tr0, r1, #1\n \tldc\t0, cr0, [r6], {71}\t@ 0x47\n \tasrs\tr2, r2, #30\n \tlsls\tr0, r1, #1\n-\tadd\tr1, pc, #824\t@ (adr r1, 2febc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x59e4>)\n+\tadd\tr1, pc, #872\t@ (adr r1, 2feec >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5a14>)\n \tmovs\tr3, r7\n \tasrs\tr2, r6, #29\n \tlsls\tr0, r1, #1\n \tasrs\tr0, r3, #29\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -72450,21 +72450,21 @@\n \tlsls\tr0, r1, #1\n \tasrs\tr6, r2, #22\n \tlsls\tr0, r1, #1\n \tasrs\tr4, r6, #21\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #744]\t@ 0x2e8\n+\tldr\tr6, [sp, #792]\t@ 0x318\n \tmovs\tr3, r7\n-\tldr\tr6, [sp, #776]\t@ 0x308\n+\tldr\tr6, [sp, #824]\t@ 0x338\n \tmovs\tr3, r7\n-\tldr\tr6, [sp, #672]\t@ 0x2a0\n+\tldr\tr6, [sp, #720]\t@ 0x2d0\n \tmovs\tr3, r7\n-\tldr\tr6, [sp, #688]\t@ 0x2b0\n+\tldr\tr6, [sp, #736]\t@ 0x2e0\n \tmovs\tr3, r7\n \tlsls\tr4, r1, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -73517,85 +73517,85 @@\n \tb.n\t3038c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5eb4>\n \tb.n\t3037c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5ea4>\n \tb.n\t3038c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5eb4>\n \tb.n\t3037c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5ea4>\n \tb.n\t3038c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5eb4>\n \tb.n\t3037c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5ea4>\n \tb.n\t3038c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5eb4>\n-\tldr\tr5, [sp, #720]\t@ 0x2d0\n+\tldr\tr5, [sp, #768]\t@ 0x300\n \tmovs\tr3, r7\n-\tldr\tr4, [sp, #952]\t@ 0x3b8\n+\tldr\tr4, [sp, #1000]\t@ 0x3e8\n \tmovs\tr3, r7\n \tlsls\tr4, r1, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #480]\t@ 0x1e0\n+\tldr\tr1, [sp, #528]\t@ 0x210\n \tmovs\tr3, r7\n \tasrs\tr4, r3, #32\n \tlsls\tr0, r1, #1\n \tlsrs\tr0, r7, #31\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r3, #31\n \tlsls\tr0, r1, #1\n \tlsrs\tr2, r1, #31\n \tlsls\tr0, r1, #1\n \tlsrs\tr6, r6, #27\n \tlsls\tr0, r1, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [r7, #80]\t@ 0x50\n+\tldr\tr0, [r1, #84]\t@ 0x54\n \tmovs\tr3, r7\n-\tldr\tr0, [r7, #80]\t@ 0x50\n+\tldr\tr4, [r0, #84]\t@ 0x54\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tstr\tr7, [sp, #232]\t@ 0xe8\n+\tstr\tr7, [sp, #280]\t@ 0x118\n \tmovs\tr3, r7\n-\tstr\tr5, [sp, #480]\t@ 0x1e0\n+\tstr\tr5, [sp, #528]\t@ 0x210\n \tmovs\tr3, r7\n-\tstr\tr5, [sp, #456]\t@ 0x1c8\n+\tstr\tr5, [sp, #504]\t@ 0x1f8\n \tmovs\tr3, r7\n-\tadd\tr3, sp, #704\t@ 0x2c0\n+\tadd\tr3, sp, #736\t@ 0x2e0\n \tmovs\tr5, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr6, [r4, #56]\t@ 0x38\n+\tldr\tr2, [r6, #56]\t@ 0x38\n \tmovs\tr3, r7\n-\tldr\tr4, [r4, #56]\t@ 0x38\n+\tldr\tr0, [r6, #56]\t@ 0x38\n \tmovs\tr3, r7\n-\tldr\tr1, [sp, #152]\t@ 0x98\n+\tldr\tr1, [sp, #200]\t@ 0xc8\n \tmovs\tr3, r7\n-\tldr\tr0, [sp, #32]\n+\tldr\tr0, [sp, #80]\t@ 0x50\n \tmovs\tr3, r7\n-\tldr\tr0, [sp, #160]\t@ 0xa0\n+\tldr\tr0, [sp, #208]\t@ 0xd0\n \tmovs\tr3, r7\n-\tstr\tr6, [sp, #456]\t@ 0x1c8\n+\tstr\tr6, [sp, #504]\t@ 0x1f8\n \tmovs\tr3, r7\n \tlsrs\tr2, r6, #13\n \tlsls\tr0, r1, #1\n-\tstr\tr6, [sp, #728]\t@ 0x2d8\n+\tstr\tr6, [sp, #776]\t@ 0x308\n \tmovs\tr3, r7\n \tlsrs\tr2, r2, #13\n \tlsls\tr0, r1, #1\n-\trevsh\tr2, r7\n+\tcbnz\tr2, 3048c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned int&&)@@Base+0x5fb4>\n \tmovs\tr5, r7\n-\tstr\tr5, [sp, #384]\t@ 0x180\n+\tstr\tr5, [sp, #432]\t@ 0x1b0\n \tmovs\tr3, r7\n \tlsrs\tr0, r2, #11\n \tlsls\tr0, r1, #1\n-\tstr\tr5, [sp, #544]\t@ 0x220\n+\tstr\tr5, [sp, #592]\t@ 0x250\n \tmovs\tr3, r7\n-\tstr\tr2, [sp, #680]\t@ 0x2a8\n+\tstr\tr2, [sp, #728]\t@ 0x2d8\n \tmovs\tr3, r7\n-\tstr\tr2, [sp, #736]\t@ 0x2e0\n+\tstr\tr2, [sp, #784]\t@ 0x310\n \tmovs\tr3, r7\n-\tstr\tr2, [sp, #872]\t@ 0x368\n+\tstr\tr2, [sp, #920]\t@ 0x398\n \tmovs\tr3, r7\n std::_Hashtable, std::allocator >, std::pair, std::allocator > const, unsigned char>, std::allocator, std::allocator > const, unsigned char> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_rehash(unsigned int, unsigned int const&):\n /usr/include/c++/10/bits/hashtable.h:392\n \tcmp\tr1, #1\n /usr/include/c++/10/bits/hashtable.h:2064\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/hashtable.h:394\n@@ -74188,17 +74188,17 @@\n \tb.n\t30838 \n \tstmia\tr7!, {r2, r6, r7}\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr7!, {r3, r5, r7}\n \tlsls\tr7, r0, #1\n-\tldmia\tr1!, {r3, r4, r7}\n+\tldmia\tr1!, {r5, r7}\n \tmovs\tr4, r7\n-\tstrh\tr2, [r2, #22]\n+\tstrh\tr6, [r3, #22]\n \tmovs\tr3, r7\n dbgReplayMain(int, char**):\n ./src/modules/mod_dbgreplay.C:15\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.tcc:215\n \tmov.w\tlr, #35\t@ 0x23\n ./src/modules/mod_dbgreplay.C:15\n@@ -74510,23 +74510,23 @@\n \tstrd\tr2, r3, [r6]\n \tb.n\t30b2c \n \t...\n \tstmia\tr6!, {r4, r6, r7}\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #792]\t@ 0x318\n+\tstr\tr2, [sp, #840]\t@ 0x348\n \tmovs\tr3, r7\n-\tstr\tr2, [sp, #776]\t@ 0x308\n+\tstr\tr2, [sp, #824]\t@ 0x338\n \tmovs\tr3, r7\n-\tstr\tr2, [sp, #520]\t@ 0x208\n+\tstr\tr2, [sp, #568]\t@ 0x238\n \tmovs\tr3, r7\n \tstmia\tr6!, {r1, r2, r3, r4, r5}\n \tlsls\tr7, r0, #1\n-\tstr\tr2, [sp, #304]\t@ 0x130\n+\tstr\tr2, [sp, #352]\t@ 0x160\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n /usr/include/c++/10/ext/new_allocator.h:150\n \tmov\tr1, r7\n \tbl\t312e8 \n /usr/include/c++/10/bits/stl_vector.h:1194\n@@ -75429,51 +75429,51 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t3111e \n \tnop\n \t...\n-\tstr\tr0, [sp, #520]\t@ 0x208\n+\tstr\tr0, [sp, #568]\t@ 0x238\n \tmovs\tr3, r7\n-\tstr\tr0, [sp, #120]\t@ 0x78\n+\tstr\tr0, [sp, #168]\t@ 0xa8\n \tmovs\tr3, r7\n \tstmia\tr0!, {r6, r7}\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrh\tr6, [r1, #40]\t@ 0x28\n+\tldrh\tr2, [r3, #40]\t@ 0x28\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr6, [r0, #32]\n+\tldrh\tr2, [r2, #32]\n \tmovs\tr3, r7\n-\tldrh\tr2, [r7, #30]\n+\tldrh\tr6, [r0, #32]\n \tmovs\tr3, r7\n-\tldrh\tr4, [r4, #30]\n+\tldrh\tr0, [r6, #30]\n \tmovs\tr3, r7\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrh\tr4, [r5, #24]\n+\tldrh\tr0, [r7, #24]\n \tmovs\tr3, r7\n-\tldrh\tr4, [r6, #22]\n+\tldrh\tr0, [r0, #24]\n \tmovs\tr3, r7\n-\tldrh\tr6, [r3, #22]\n+\tldrh\tr2, [r5, #22]\n \tmovs\tr3, r7\n ./src/modules/mod_dbgreplay.C:61\n \tmov\tr0, r7\n \tbl\t211158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73324>\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrd\tr5, r9, [r6]\n /usr/include/c++/10/bits/stl_construct.h:151\n@@ -77148,15 +77148,15 @@\n \tmovs\tr3, r7\n \tsubs\tr7, #36\t@ 0x24\n \tmovs\tr3, r7\n \tsubs\tr7, #28\n \tmovs\tr3, r7\n \tsubs\tr7, #20\n \tmovs\tr3, r7\n-\tldr\tr5, [pc, #176]\t@ (320f4 )\n+\tldr\tr5, [pc, #224]\t@ (32124 )\n \tmovs\tr3, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n MiraDiff::MiraDiff():\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr2, #0\n \tstrd\tr2, r2, [r0]\n@@ -77226,23 +77226,23 @@\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t32082 \n \tnop\n \tadd\tr7, sp, #16\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tip, pc\n+\tcmp\tr0, r1\n \tmovs\tr3, r7\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n-\tsubs\tr7, #76\t@ 0x4c\n+\tsubs\tr7, #84\t@ 0x54\n \tmovs\tr4, r7\n-\tadd\tip, ip\n+\tadd\tr8, lr\n \tmovs\tr3, r7\n-\tmov\tr4, r4\n+\tmov\tr0, r6\n \tmovs\tr3, r7\n MiraDiff::priv_clipsAfterLoad(ReadPool&):\n ./src/modules/mod_diff.C:59\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr3, r1\n \tldr.w\tr4, [pc, #1860]\t@ 32828 \n \tvpush\t{d8}\n@@ -78253,41 +78253,41 @@\n \tb.n\t3281a \n \tb.n\t3277a \n \tnop\n \tadd\tr6, sp, #440\t@ 0x1b8\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr2, [r7, #12]\n+\tldrb\tr6, [r0, #13]\n \tmovs\tr3, r7\n-\tb.n\t32fb8 \n+\tb.n\t32fc8 \n \tmovs\tr4, r7\n \tadd\tr6, sp, #168\t@ 0xa8\n \tlsls\tr7, r0, #1\n-\tldrb\tr6, [r6, #8]\n+\tldrb\tr2, [r0, #9]\n \tmovs\tr3, r7\n-\tldrb\tr6, [r3, #27]\n+\tldrb\tr6, [r4, #27]\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr0, [r6, #3]\n+\tldrb\tr4, [r7, #3]\n \tmovs\tr3, r7\n-\tldrb\tr4, [r4, #3]\n+\tldrb\tr0, [r6, #3]\n \tmovs\tr3, r7\n \tadd\tr2, sp, #960\t@ 0x3c0\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstrb\tr4, [r0, #27]\n+\tstrb\tr0, [r2, #27]\n \tmovs\tr3, r7\n-\tstrb\tr6, [r4, #25]\n+\tstrb\tr2, [r6, #25]\n \tmovs\tr3, r7\n-\tstrb\tr4, [r1, #24]\n+\tstrb\tr0, [r3, #24]\n \tmovs\tr3, r7\n-\tstr\tr0, [r7, #56]\t@ 0x38\n+\tstr\tr4, [r0, #60]\t@ 0x3c\n \tmovs\tr3, r7\n MiraDiff::priv_simpleDiff(int, char**):\n ./src/modules/mod_diff.C:102\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr6, [pc, #1328]\t@ 32da0 \n \tvpush\t{d8-d10}\n@@ -79045,43 +79045,43 @@\n \tmovs\tr0, r0\n \tadd\tr6, pc, #856\t@ (adr r6, 33104 )\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r6, #11]\n+\tstrb\tr4, [r7, #11]\n \tmovs\tr3, r7\n-\tstrb\tr6, [r5, #11]\n+\tstrb\tr2, [r7, #11]\n \tmovs\tr3, r7\n-\tstrb\tr6, [r1, #6]\n+\tstrb\tr2, [r3, #6]\n \tmovs\tr3, r7\n-\tstrb\tr2, [r1, #6]\n+\tstrb\tr6, [r2, #6]\n \tmovs\tr3, r7\n-\tldrsh\tr0, [r1, r2]\n+\tldrsh\tr0, [r2, r2]\n \tmovs\tr4, r7\n-\tstrb\tr4, [r2, #5]\n-\tmovs\tr3, r7\n \tstrb\tr0, [r4, #5]\n \tmovs\tr3, r7\n-\tstrb\tr4, [r6, #5]\n+\tstrb\tr4, [r5, #5]\n \tmovs\tr3, r7\n-\tstrb\tr2, [r0, #4]\n+\tstrb\tr0, [r0, #6]\n+\tmovs\tr3, r7\n+\tstrb\tr6, [r1, #4]\n \tmovs\tr3, r7\n-\tadd\tr5, pc, #976\t@ (adr r5, 331ac )\n+\tadd\tr5, pc, #1008\t@ (adr r5, 331cc )\n \tmovs\tr5, r7\n-\tstrb\tr6, [r0, #2]\n+\tstrb\tr2, [r2, #2]\n \tmovs\tr3, r7\n-\tstrb\tr4, [r1, #1]\n+\tstrb\tr0, [r3, #1]\n \tmovs\tr3, r7\n-\tstrb\tr6, [r2, #0]\n+\tstrb\tr2, [r4, #0]\n \tmovs\tr3, r7\n-\tldr\tr2, [r3, #120]\t@ 0x78\n+\tldr\tr6, [r4, #120]\t@ 0x78\n \tmovs\tr3, r7\n-\tldr\tr0, [r3, #120]\t@ 0x78\n+\tldr\tr4, [r4, #120]\t@ 0x78\n \tmovs\tr3, r7\n ./src/modules/mod_diff.C:174\n \tvmov\tr0, s19\n \tbl\t37dbf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dfdbc>\n /usr/include/c++/10/bits/stl_list.h:946\n \tldr\tr1, [sp, #64]\t@ 0x40\n \tldr.w\tr8, [r1]\n@@ -79500,37 +79500,37 @@\n \tbeq.w\t333a6 \n /usr/include/c++/10/bits/locale_facets.h:875\n \tldrb.w\tr1, [r5, #39]\t@ 0x27\n \tb.n\t33140 \n \tnop.w\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xffffffff\n-\tldr\tr4, [r1, #96]\t@ 0x60\n-\tmovs\tr3, r7\n-\tldr\tr0, [r1, #96]\t@ 0x60\n+\tldr\tr0, [r3, #96]\t@ 0x60\n \tmovs\tr3, r7\n-\tldr\tr2, [r5, #96]\t@ 0x60\n+\tldr\tr4, [r2, #96]\t@ 0x60\n \tmovs\tr3, r7\n-\tldr\tr2, [r2, #92]\t@ 0x5c\n+\tldr\tr6, [r6, #96]\t@ 0x60\n \tmovs\tr3, r7\n \tldr\tr6, [r3, #92]\t@ 0x5c\n \tmovs\tr3, r7\n-\tldr\tr2, [r6, #92]\t@ 0x5c\n+\tldr\tr2, [r5, #92]\t@ 0x5c\n \tmovs\tr3, r7\n-\tldr\tr4, [r3, #88]\t@ 0x58\n+\tldr\tr6, [r7, #92]\t@ 0x5c\n+\tmovs\tr3, r7\n+\tldr\tr0, [r5, #88]\t@ 0x58\n \tmovs\tr3, r7\n-\tadd\tr2, pc, #568\t@ (adr r2, 33368 )\n+\tadd\tr2, pc, #600\t@ (adr r2, 33388 )\n \tmovs\tr5, r7\n-\tldr\tr2, [r4, #80]\t@ 0x50\n+\tldr\tr6, [r5, #80]\t@ 0x50\n \tmovs\tr3, r7\n-\tldr\tr2, [r4, #76]\t@ 0x4c\n+\tldr\tr6, [r5, #76]\t@ 0x4c\n \tmovs\tr3, r7\n-\tldr\tr4, [r5, #72]\t@ 0x48\n+\tldr\tr0, [r7, #72]\t@ 0x48\n \tmovs\tr3, r7\n-\tldr\tr6, [r0, #76]\t@ 0x4c\n+\tldr\tr2, [r2, #76]\t@ 0x4c\n \tmovs\tr3, r7\n /usr/include/c++/10/ostream:682\n \tmov\tr0, sl\n \tblx\tb648 \n /usr/include/c++/10/ostream:704\n \tblx\tb558 \n ./src/modules/mod_diff.C:215\n@@ -80277,41 +80277,41 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t33590 \n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t33652 \n \tb.n\t3366c \n \tb.n\t33652 \n \tnop\n-\tldr\tr6, [r7, #64]\t@ 0x40\n+\tldr\tr2, [r1, #68]\t@ 0x44\n \tmovs\tr3, r7\n-\tldr\tr0, [r6, #64]\t@ 0x40\n+\tldr\tr4, [r7, #64]\t@ 0x40\n \tmovs\tr3, r7\n-\tstrb\tr4, [r2, r1]\n+\tstrb\tr4, [r3, r1]\n \tmovs\tr4, r7\n-\tldr\tr6, [r2, #60]\t@ 0x3c\n+\tldr\tr2, [r4, #60]\t@ 0x3c\n \tmovs\tr3, r7\n-\tldr\tr2, [r1, #60]\t@ 0x3c\n+\tldr\tr6, [r2, #60]\t@ 0x3c\n \tmovs\tr3, r7\n-\tstrh\tr0, [r6, r7]\n+\tstrh\tr0, [r7, r7]\n \tmovs\tr4, r7\n-\tldr\tr2, [r2, #48]\t@ 0x30\n+\tldr\tr6, [r3, #48]\t@ 0x30\n \tmovs\tr3, r7\n \tldr\tr4, [sp, #456]\t@ 0x1c8\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tcmp\tr1, #12\n \tmovs\tr3, r7\n-\tldrsb\tr0, [r1, r0]\n+\tldrsb\tr4, [r2, r0]\n \tmovs\tr3, r7\n \tcmp\tr0, #244\t@ 0xf4\n \tmovs\tr3, r7\n-\tstrb\tr0, [r6, r7]\n+\tstrb\tr4, [r7, r7]\n \tmovs\tr3, r7\n \tcmp\tr0, #228\t@ 0xe4\n \tmovs\tr3, r7\n \tcmp\tr0, #220\t@ 0xdc\n \tmovs\tr3, r7\n MiraDiff::mainMiraDiff(int, char**):\n ./src/modules/mod_diff.C:238\n@@ -80616,33 +80616,33 @@\n \tnop\n \tldr\tr0, [sp, #480]\t@ 0x1e0\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr3, sp, #816\t@ 0x330\n \tlsls\tr7, r0, #1\n-\tstr\tr6, [r0, #108]\t@ 0x6c\n+\tstr\tr2, [r2, #108]\t@ 0x6c\n \tmovs\tr3, r7\n \tldr\tr0, [sp, #328]\t@ 0x148\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #28\n \tmovs\tr0, r0\n-\tcmp\tr6, #136\t@ 0x88\n+\tcmp\tr6, #148\t@ 0x94\n \tmovs\tr3, r7\n-\tstr\tr0, [r2, #92]\t@ 0x5c\n+\tstr\tr4, [r3, #92]\t@ 0x5c\n \tmovs\tr3, r7\n-\tstr\tr4, [r4, #96]\t@ 0x60\n+\tstr\tr0, [r6, #96]\t@ 0x60\n \tmovs\tr3, r7\n-\tcmp\tr6, #184\t@ 0xb8\n+\tcmp\tr6, #196\t@ 0xc4\n \tmovs\tr3, r7\n-\tldr\tr4, [r6, #36]\t@ 0x24\n+\tldr\tr0, [r0, #40]\t@ 0x28\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tstr\tr6, [sp, #840]\t@ 0x348\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n@@ -80654,15 +80654,15 @@\n \tmovs\tr3, r7\n boost::bad_lexical_cast::what() const:\n /usr/include/boost/lexical_cast/bad_lexical_cast.hpp:57\n \tldr\tr0, [pc, #4]\t@ (33980 )\n \tadd\tr0, pc\n \tbx\tlr\n \tnop\n-\tstr\tr6, [r2, #40]\t@ 0x28\n+\tstr\tr2, [r4, #40]\t@ 0x28\n \tmovs\tr3, r7\n boost::bad_lexical_cast::~bad_lexical_cast():\n /usr/include/boost/lexical_cast/bad_lexical_cast.hpp:59\n \tldr\tr3, [pc, #20]\t@ (3399c )\n /usr/include/boost/lexical_cast/bad_lexical_cast.hpp:60\n \tldr\tr2, [pc, #24]\t@ (339a0 )\n /usr/include/boost/lexical_cast/bad_lexical_cast.hpp:59\n@@ -81266,17 +81266,17 @@\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t33d94 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5c>\n \tnop\n \tstr\tr1, [sp, #912]\t@ 0x390\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #136]\t@ 0x88\n+\tstr\tr4, [sp, #168]\t@ 0xa8\n \tmovs\tr4, r7\n-\tstr\tr2, [r6, #12]\n+\tstr\tr6, [r7, #12]\n \tmovs\tr3, r7\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr6, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n@@ -81471,23 +81471,23 @@\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t33f16 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1de>\n \tnop\n \tstr\tr0, [sp, #448]\t@ 0x1c0\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr6, #104\t@ 0x68\n+\tmovs\tr6, #116\t@ 0x74\n \tmovs\tr3, r7\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n-\tmovs\tr0, #184\t@ 0xb8\n+\tmovs\tr0, #192\t@ 0xc0\n \tmovs\tr4, r7\n-\tmovs\tr6, #80\t@ 0x50\n+\tmovs\tr6, #92\t@ 0x5c\n \tmovs\tr3, r7\n-\tmovs\tr7, #144\t@ 0x90\n+\tmovs\tr7, #156\t@ 0x9c\n \tmovs\tr3, r7\n MiraMer::merFilterHashStats(int, char**):\n ./src/modules/mod_mer.C:196\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #2340]\t@ 3489c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb64>\n \tldr.w\tr4, [pc, #2340]\t@ 348a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb68>\n \tadd\tr5, pc\n@@ -82928,17 +82928,17 @@\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tldrh\tr6, [r7, #56]\t@ 0x38\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr4, [r1, #16]\n+\tldrh\tr4, [r2, #16]\n \tmovs\tr4, r7\n-\tldrsb\tr2, [r0, r4]\n+\tldrsb\tr6, [r1, r4]\n \tmovs\tr3, r7\n \tasrs\tr4, r6, #24\n \tmovs\tr3, r7\n \tasrs\tr0, r5, #24\n \tmovs\tr3, r7\n \tasrs\tr0, r3, #24\n \tmovs\tr3, r7\n@@ -83034,21 +83034,21 @@\n \tblx\tbe10 \n \tstrh\tr0, [r5, #50]\t@ 0x32\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr2, [r4, #4]\n+\tldrh\tr2, [r5, #4]\n \tmovs\tr4, r7\n-\tstrb\tr4, [r1, r7]\n+\tstrb\tr0, [r3, r7]\n \tmovs\tr3, r7\n-\tldrh\tr6, [r7, #2]\n+\tldrh\tr6, [r0, #4]\n \tmovs\tr4, r7\n-\tadds\tr0, r4, #1\n+\tadds\tr4, r5, #1\n \tmovs\tr3, r7\n MiraMer::merDumpHashStats(int, char**):\n ./src/modules/mod_mer.C:359\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tldr\tr5, [pc, #544]\t@ (34b98 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xe60>)\n \tldr\tr4, [pc, #548]\t@ (34b9c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xe64>)\n \tsub\tsp, #312\t@ 0x138\n@@ -83360,25 +83360,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tstrh\tr2, [r0, #42]\t@ 0x2a\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrh\tr2, [r0, #56]\t@ 0x38\n+\tstrh\tr2, [r1, #56]\t@ 0x38\n \tmovs\tr4, r7\n-\tsubs\tr4, r4, r3\n+\tsubs\tr0, r6, r3\n \tmovs\tr3, r7\n-\tstrb\tr4, [r6, r0]\n+\tstrb\tr0, [r0, r1]\n \tmovs\tr3, r7\n-\tstrb\tr4, [r5, r0]\n+\tstrb\tr0, [r7, r0]\n \tmovs\tr3, r7\n-\tstrb\tr4, [r4, r0]\n+\tstrb\tr0, [r6, r0]\n \tmovs\tr3, r7\n-\tstrb\tr2, [r3, r0]\n+\tstrb\tr6, [r4, r0]\n \tmovs\tr3, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tasrs\tr4, r4, #10\n \tmovs\tr3, r7\n@@ -83693,25 +83693,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tstrh\tr4, [r3, #22]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrh\tr4, [r3, #36]\t@ 0x24\n+\tstrh\tr4, [r4, #36]\t@ 0x24\n \tmovs\tr4, r7\n-\tadds\tr6, r7, r1\n+\tadds\tr2, r1, r2\n \tmovs\tr3, r7\n-\tstr\tr6, [r1, r7]\n+\tstr\tr2, [r3, r7]\n \tmovs\tr3, r7\n-\tstr\tr6, [r0, r7]\n+\tstr\tr2, [r2, r7]\n \tmovs\tr3, r7\n-\tstr\tr6, [r7, r6]\n+\tstr\tr2, [r1, r7]\n \tmovs\tr3, r7\n-\tstr\tr4, [r5, r7]\n+\tstr\tr0, [r7, r7]\n \tmovs\tr3, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tasrs\tr2, r0, #1\n \tmovs\tr3, r7\n@@ -84017,25 +84017,25 @@\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tstrh\tr6, [r0, #4]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrh\tr2, [r2, #18]\n+\tstrh\tr2, [r3, #18]\n \tmovs\tr4, r7\n-\tasrs\tr4, r6, #24\n+\tasrs\tr0, r0, #25\n \tmovs\tr3, r7\n-\tldr\tr7, [pc, #528]\t@ (35278 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1540>)\n+\tldr\tr7, [pc, #576]\t@ (352a8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1570>)\n \tmovs\tr3, r7\n-\tldr\tr7, [pc, #496]\t@ (3525c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1524>)\n+\tldr\tr7, [pc, #544]\t@ (3528c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1554>)\n \tmovs\tr3, r7\n-\tldr\tr7, [pc, #464]\t@ (35240 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1508>)\n+\tldr\tr7, [pc, #512]\t@ (35270 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1538>)\n \tmovs\tr3, r7\n-\tldr\tr7, [pc, #856]\t@ (353cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1694>)\n+\tldr\tr7, [pc, #904]\t@ (353fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x16c4>)\n \tmovs\tr3, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #23\n \tmovs\tr3, r7\n@@ -84681,39 +84681,39 @@\n \tlsls\tr7, r0, #1\n \tldrb\tr6, [r0, #27]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #496]\t@ (356e0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x19a8>)\n+\tldr\tr6, [pc, #544]\t@ (35710 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x19d8>)\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #416]\t@ (35698 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1960>)\n+\tldr\tr6, [pc, #464]\t@ (356c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1990>)\n \tmovs\tr3, r7\n \tldrb\tr6, [r5, #19]\n \tlsls\tr7, r0, #1\n \tlsrs\tr2, r2, #13\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrb\tr0, [r6, #23]\n+\tldrb\tr0, [r7, #23]\n \tmovs\tr4, r7\n-\tasrs\tr2, r2, #7\n+\tasrs\tr6, r3, #7\n \tmovs\tr3, r7\n-\tldr\tr3, [pc, #144]\t@ (355a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x186c>)\n+\tldr\tr3, [pc, #192]\t@ (355d4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x189c>)\n \tmovs\tr3, r7\n-\tldr\tr3, [pc, #104]\t@ (35580 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1848>)\n+\tldr\tr3, [pc, #152]\t@ (355b0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1878>)\n \tmovs\tr3, r7\n-\tldr\tr3, [pc, #72]\t@ (35564 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x182c>)\n+\tldr\tr3, [pc, #120]\t@ (35594 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x185c>)\n \tmovs\tr3, r7\n-\tldr\tr3, [pc, #848]\t@ (35870 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1b38>)\n+\tldr\tr3, [pc, #896]\t@ (358a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1b68>)\n \tmovs\tr3, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MiraMer::merInfoHashStats(int, char**):\n ./src/modules/mod_mer.C:135\n@@ -85234,44 +85234,44 @@\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr0, [r4, #8]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #856]\t@ (35c38 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f00>)\n+\tldr\tr2, [pc, #904]\t@ (35c68 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f30>)\n \tmovs\tr3, r7\n-\tmrrc\t0, 3, r0, r2, cr11\n-\tldr\tr3, [pc, #224]\t@ (359c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c90>)\n+\tmrrc\t0, 3, r0, sl, cr11\n+\tldr\tr3, [pc, #272]\t@ (359f8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1cc0>)\n \tmovs\tr3, r7\n \tlsls\tr4, r3, #31\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #872]\t@ (35c5c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f24>)\n+\tldr\tr1, [pc, #920]\t@ (35c8c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f54>)\n \tmovs\tr3, r7\n-\tldr\tr1, [pc, #896]\t@ (35c78 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f40>)\n+\tldr\tr1, [pc, #944]\t@ (35ca8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f70>)\n \tmovs\tr3, r7\n-\tldr\tr1, [pc, #896]\t@ (35c7c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f44>)\n+\tldr\tr1, [pc, #944]\t@ (35cac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f74>)\n \tmovs\tr3, r7\n-\tldr\tr1, [pc, #880]\t@ (35c70 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f38>)\n+\tldr\tr1, [pc, #928]\t@ (35ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f68>)\n \tmovs\tr3, r7\n-\tldr\tr1, [pc, #856]\t@ (35c5c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f24>)\n+\tldr\tr1, [pc, #904]\t@ (35c8c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f54>)\n \tmovs\tr3, r7\n \tstrb\tr6, [r7, #31]\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #25\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrb\tr2, [r6, #5]\n+\tldrb\tr2, [r7, #5]\n \tmovs\tr4, r7\n-\tlsrs\tr4, r2, #21\n+\tlsrs\tr0, r4, #21\n \tmovs\tr3, r7\n void MiraMer::mer_bdbg_helper1 >(int, char**, HashStatistics >&) [clone .isra.0]:\n ./src/modules/mod_mer.C:219\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr4, [pc, #1976]\t@ 360dc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x23a4>\n \tldr.w\tr2, [pc, #1976]\t@ 360e0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x23a8>\n@@ -86316,43 +86316,43 @@\n \tmovs\tr0, r0\n \tstrb\tr2, [r4, #24]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmov\tr8, pc\n+\tbxns\tr0\n \tmovs\tr3, r7\n-\tmov\tlr, sl\n+\tmov\tsl, ip\n \tmovs\tr3, r7\n-\tmov\tr6, sl\n+\tmov\tr2, ip\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tadd\tlr, sp\n+\tadd\tsl, pc\n \tmovs\tr3, r7\n-\tbics\tr6, r7\n+\tmvns\tr2, r1\n \tmovs\tr3, r7\n \tstrb\tr2, [r6, #3]\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tcmp\tr3, #6\n+\tcmp\tr3, #18\n \tmovs\tr3, r7\n-\tcmp\tr2, #254\t@ 0xfe\n+\tcmp\tr3, #10\n \tmovs\tr3, r7\n-\tcmp\tr2, #246\t@ 0xf6\n+\tcmp\tr3, #2\n \tmovs\tr3, r7\n \tstc2l\t0, cr0, [sl, #232]!\t@ 0xe8\n \tstc2l\t0, cr0, [r2, #232]!\t@ 0xe8\n \tldc2l\t0, cr0, [sl, #232]\t@ 0xe8\n \tldc2l\t0, cr0, [r2, #232]\t@ 0xe8\n \tstc2l\t0, cr0, [sl, #232]\t@ 0xe8\n void MiraMer::mer_bdbg_helper1(int, char**, HashStatistics&) [clone .isra.0]:\n@@ -87402,43 +87402,43 @@\n \tmovs\tr0, r0\n \tldr\tr6, [r7, #92]\t@ 0x5c\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr6, #212\t@ 0xd4\n+\tsubs\tr6, #224\t@ 0xe0\n \tmovs\tr3, r7\n-\tsubs\tr6, #178\t@ 0xb2\n+\tsubs\tr6, #190\t@ 0xbe\n \tmovs\tr3, r7\n-\tsubs\tr6, #50\t@ 0x32\n+\tsubs\tr6, #62\t@ 0x3e\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tsubs\tr4, #202\t@ 0xca\n+\tsubs\tr4, #214\t@ 0xd6\n \tmovs\tr3, r7\n-\tsubs\tr3, #154\t@ 0x9a\n+\tsubs\tr3, #166\t@ 0xa6\n \tmovs\tr3, r7\n \tldr\tr6, [r1, #12]\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr2, #226\t@ 0xe2\n+\tmovs\tr2, #238\t@ 0xee\n \tmovs\tr3, r7\n-\tmovs\tr2, #218\t@ 0xda\n+\tmovs\tr2, #230\t@ 0xe6\n \tmovs\tr3, r7\n-\tmovs\tr2, #210\t@ 0xd2\n+\tmovs\tr2, #222\t@ 0xde\n \tmovs\tr3, r7\n \trsb\tr0, r6, #12189696\t@ 0xba0000\n \tsubs.w\tr0, lr, #12189696\t@ 0xba0000\n \tsubs.w\tr0, r6, #12189696\t@ 0xba0000\n \tsub.w\tr0, lr, #12189696\t@ 0xba0000\n \tsub.w\tr0, r6, #12189696\t@ 0xba0000\n void MiraMer::mer_bdbg_helper1 >(int, char**, HashStatistics >&) [clone .isra.0]:\n@@ -88488,43 +88488,43 @@\n \tmovs\tr0, r0\n \tstr\tr2, [r3, #92]\t@ 0x5c\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr6, #176\t@ 0xb0\n+\tadds\tr6, #188\t@ 0xbc\n \tmovs\tr3, r7\n-\tadds\tr6, #142\t@ 0x8e\n+\tadds\tr6, #154\t@ 0x9a\n \tmovs\tr3, r7\n-\tadds\tr6, #14\n+\tadds\tr6, #26\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tadds\tr4, #166\t@ 0xa6\n+\tadds\tr4, #178\t@ 0xb2\n \tmovs\tr3, r7\n-\tadds\tr3, #118\t@ 0x76\n+\tadds\tr3, #130\t@ 0x82\n \tmovs\tr3, r7\n \tstr\tr2, [r5, #8]\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsubs\tr6, r7, r2\n+\tsubs\tr2, r1, r3\n \tmovs\tr3, r7\n-\tsubs\tr6, r6, r2\n+\tsubs\tr2, r0, r3\n \tmovs\tr3, r7\n-\tsubs\tr6, r5, r2\n+\tsubs\tr2, r7, r2\n \tmovs\tr3, r7\n \tstc\t0, cr0, [r2, #232]!\t@ 0xe8\n \tldc\t0, cr0, [sl, #232]\t@ 0xe8\n \tldc\t0, cr0, [r2, #232]\t@ 0xe8\n \tstc\t0, cr0, [sl, #232]\t@ 0xe8\n \tstc\t0, cr0, [r2, #232]\t@ 0xe8\n void MiraMer::mer_bdbg_helper1 >(int, char**, HashStatistics >&) [clone .isra.0]:\n@@ -89574,43 +89574,43 @@\n \tmovs\tr0, r0\n \tldrb\tr6, [r6, r6]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr6, #140\t@ 0x8c\n+\tcmp\tr6, #152\t@ 0x98\n \tmovs\tr3, r7\n-\tcmp\tr6, #106\t@ 0x6a\n+\tcmp\tr6, #118\t@ 0x76\n \tmovs\tr3, r7\n-\tcmp\tr5, #234\t@ 0xea\n+\tcmp\tr5, #246\t@ 0xf6\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tcmp\tr4, #130\t@ 0x82\n+\tcmp\tr4, #142\t@ 0x8e\n \tmovs\tr3, r7\n-\tcmp\tr3, #82\t@ 0x52\n+\tcmp\tr3, #94\t@ 0x5e\n \tmovs\tr3, r7\n \tldr\tr6, [r0, r2]\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tasrs\tr2, r3, #10\n+\tasrs\tr6, r4, #10\n \tmovs\tr3, r7\n-\tasrs\tr2, r2, #10\n+\tasrs\tr6, r3, #10\n \tmovs\tr3, r7\n-\tasrs\tr2, r1, #10\n+\tasrs\tr6, r2, #10\n \tmovs\tr3, r7\n \tb.n\t37498 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x3760>\n \tmovs\tr2, r7\n \tb.n\t3748c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x3754>\n \tmovs\tr2, r7\n \tb.n\t37480 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x3748>\n \tmovs\tr2, r7\n@@ -89890,17 +89890,17 @@\n \tlsls\tr7, r0, #1\n \tstrb\tr4, [r1, r2]\n \tlsls\tr7, r0, #1\n \tstrb\tr6, [r4, r1]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrsb\tr2, [r2, r2]\n+\tldrsb\tr2, [r3, r2]\n \tmovs\tr4, r7\n-\tmovs\tr5, #248\t@ 0xf8\n+\tmovs\tr6, #4\n \tmovs\tr3, r7\n \tb.n\t38108 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x43d0>\n \tmovs\tr2, r7\n MiraMer::merDiffHashStats(int, char**):\n ./src/modules/mod_mer.C:284\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n@@ -91660,65 +91660,65 @@\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbkpt\t0x00ce\n+\tbkpt\t0x00d6\n \tmovs\tr6, r7\n-\tmovs\tr3, #116\t@ 0x74\n+\tmovs\tr3, #128\t@ 0x80\n \tmovs\tr3, r7\n-\tmovs\tr3, #28\n+\tmovs\tr3, #40\t@ 0x28\n \tmovs\tr3, r7\n-\tmovs\tr2, #182\t@ 0xb6\n+\tmovs\tr2, #194\t@ 0xc2\n \tmovs\tr3, r7\n-\tmovs\tr2, #94\t@ 0x5e\n+\tmovs\tr2, #106\t@ 0x6a\n \tmovs\tr3, r7\n-\tsubs\tr6, r3, #1\n+\tsubs\tr2, r5, #1\n \tmovs\tr3, r7\n-\tmovs\tr1, #110\t@ 0x6e\n+\tmovs\tr1, #122\t@ 0x7a\n \tmovs\tr3, r7\n-\tmovs\tr1, #64\t@ 0x40\n+\tmovs\tr1, #76\t@ 0x4c\n \tmovs\tr3, r7\n-\tmovs\tr0, #192\t@ 0xc0\n+\tmovs\tr0, #204\t@ 0xcc\n \tmovs\tr3, r7\n-\tmovs\tr0, #86\t@ 0x56\n+\tmovs\tr0, #98\t@ 0x62\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tsubs\tr4, r0, #3\n+\tsubs\tr0, r2, #3\n \tmovs\tr3, r7\n-\tsubs\tr6, r2, #2\n+\tsubs\tr2, r4, #2\n \tmovs\tr3, r7\n-\tsubs\tr0, r3, #1\n+\tsubs\tr0, r4, #1\n \tmovs\tr6, r7\n-\tadds\tr6, r2, #7\n+\tadds\tr2, r4, #7\n \tmovs\tr3, r7\n-\tadds\tr4, r0, #1\n+\tadds\tr0, r2, #1\n \tmovs\tr3, r7\n-\tadds\tr2, r3, #0\n+\tadds\tr6, r4, #0\n \tmovs\tr3, r7\n-\tsubs\tr0, r3, r6\n+\tsubs\tr4, r4, r6\n \tmovs\tr3, r7\n-\tsubs\tr4, r4, r4\n+\tsubs\tr0, r6, r4\n \tmovs\tr3, r7\n-\tadds\tr6, r0, r7\n+\tadds\tr2, r2, r7\n \tmovs\tr3, r7\n-\tadds\tr4, r3, r6\n+\tadds\tr0, r5, r6\n \tmovs\tr3, r7\n-\tadds\tr2, r3, r5\n+\tadds\tr2, r4, r5\n \tmovs\tr6, r7\n /usr/include/c++/10/bits/basic_string.h:179\n \tstr.w\tr3, [fp]\n /usr/include/c++/10/bits/basic_string.h:563\n \tldr\tr1, [r0, #8]\n /usr/include/c++/10/bits/basic_string.h:211\n \tstr.w\tr1, [fp, #8]\n@@ -92864,40 +92864,40 @@\n /usr/include/c++/10/fstream:250\n \tblx\tb080 <__cxa_begin_catch@plt>\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tb.w\t3820a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x44d2>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t38fe2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x52aa>\n \tb.n\t390b8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5380>\n-\tadds\tr6, r1, r1\n+\tadds\tr2, r3, r1\n \tmovs\tr3, r7\n \tadd\tsl, r1\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldc2\t0, cr0, [ip], {58}\t@ 0x3a\n+\tstc2\t0, cr0, [r8], #-232\t@ 0xffffff18\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcmp\tr2, r7\n+\tcmn\tr2, r0\n \tmovs\tr4, r7\n-\tlsrs\tr4, r1, #30\n+\tlsrs\tr0, r3, #30\n \tmovs\tr3, r7\n-\t\t\t@ instruction: 0xfbce003a\n+\t\t\t@ instruction: 0xfbda003a\n+\t\t\t@ instruction: 0xfbd2003a\n \t\t\t@ instruction: 0xfbc6003a\n \t\t\t@ instruction: 0xfbba003a\n \t\t\t@ instruction: 0xfbae003a\n-\t\t\t@ instruction: 0xfba2003a\n-\t\t\t@ instruction: 0xfb9a003a\n-\t\t\t@ instruction: 0xfb92003a\n-\t\t\t@ instruction: 0xfb8a003a\n+\t\t\t@ instruction: 0xfba6003a\n+\t\t\t@ instruction: 0xfb9e003a\n+\t\t\t@ instruction: 0xfb96003a\n+\t\t\t@ instruction: 0xfb8e003a\n \t\t\t@ instruction: 0xfb82003a\n-\t\t\t@ instruction: 0xfb76003a\n-\t\t\t@ instruction: 0xfb6e003a\n+\t\t\t@ instruction: 0xfb7a003a\n \tldmia\tr6, {r1, r5, r6}\n \tmovs\tr2, r7\n \tldmia\tr6, {r1, r3, r4, r6}\n \tmovs\tr2, r7\n \tldmia\tr6, {r1, r4, r6}\n \tmovs\tr2, r7\n \tldmia\tr6, {r1, r3, r6}\n@@ -93585,65 +93585,65 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tsubs\tr5, #32\n \tlsls\tr7, r0, #1\n \tstr\tr4, [r1, r3]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbcc.n\t39758 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5a20>\n+\tbmi.n\t39770 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5a38>\n \tmovs\tr2, r7\n \tsubs\tr5, #0\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #28\n \tmovs\tr0, r0\n-\tbcs.n\t39810 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5ad8>\n+\tbcs.n\t39828 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5af0>\n \tmovs\tr2, r7\n-\tlsrs\tr0, r2, #6\n+\tlsrs\tr4, r3, #6\n \tmovs\tr3, r7\n-\tlsrs\tr0, r2, #21\n+\tlsrs\tr4, r3, #21\n \tmovs\tr3, r7\n-\tbcs.n\t39874 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5b3c>\n+\tbcs.n\t3968c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5954>\n \tmovs\tr2, r7\n-\tlsrs\tr2, r1, #21\n+\tlsrs\tr6, r2, #21\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tldmia\tr6, {r2, r4, r6, r7}\n \tmovs\tr2, r7\n \tsubs\tr2, #60\t@ 0x3c\n \tlsls\tr7, r0, #1\n-\tlsrs\tr0, r4, #23\n+\tlsrs\tr4, r5, #23\n \tmovs\tr3, r7\n \tldmia\tr1, {r1, r6}\n \tmovs\tr2, r7\n-\tlsrs\tr0, r6, #22\n+\tlsrs\tr4, r7, #22\n \tmovs\tr3, r7\n-\tlsrs\tr2, r4, #22\n+\tlsrs\tr6, r5, #22\n \tmovs\tr3, r7\n-\tlsrs\tr4, r2, #22\n+\tlsrs\tr0, r4, #22\n \tmovs\tr3, r7\n-\tlsrs\tr2, r0, #22\n+\tlsrs\tr6, r1, #22\n \tmovs\tr3, r7\n-\tlsrs\tr0, r6, #21\n+\tlsrs\tr4, r7, #21\n \tmovs\tr3, r7\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n-\tlsrs\tr0, r3, #21\n+\tlsrs\tr4, r4, #21\n \tmovs\tr3, r7\n-\tlsrs\tr2, r0, #21\n+\tlsrs\tr6, r1, #21\n \tmovs\tr3, r7\n-\tlsrs\tr2, r6, #18\n+\tlsrs\tr6, r7, #18\n \tmovs\tr3, r7\n-\tlsrs\tr4, r1, #20\n+\tlsrs\tr0, r3, #20\n \tmovs\tr3, r7\n-\tlsrs\tr4, r0, #20\n+\tlsrs\tr0, r2, #20\n \tmovs\tr3, r7\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n \tldmia\tr4!, {r1, r5, r7}\n \tmovs\tr2, r7\n \tldmia\tr0!, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr2, r7\n@@ -94149,15 +94149,15 @@\n \tmovs\tr0, r0\n \tstrh\tr0, [r1, #10]\n \tlsls\tr7, r0, #1\n \tldr\tr3, [pc, #152]\t@ (39c34 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x5efc>)\n \tlsls\tr7, r0, #1\n \tadds\tr7, #4\n \tlsls\tr7, r0, #1\n-\tlsrs\tr2, r4, #12\n+\tlsrs\tr6, r5, #12\n \tmovs\tr3, r7\n \tstrh\tr6, [r3, #4]\n \tlsls\tr7, r0, #1\n \tstrh\tr4, [r2, #4]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n@@ -94167,55 +94167,55 @@\n \tmovs\tr0, r0\n \tstrh\tr6, [r6, #0]\n \tlsls\tr7, r0, #1\n \tstrh\tr0, [r4, #0]\n \tlsls\tr7, r0, #1\n \tstrh\tr4, [r2, #0]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr2, r1, #9\n+\tlsrs\tr6, r2, #9\n \tmovs\tr3, r7\n-\tlsrs\tr2, r0, #9\n+\tlsrs\tr6, r1, #9\n \tmovs\tr3, r7\n \tldrb\tr6, [r0, #31]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr0, r5, #8\n+\tlsrs\tr4, r6, #8\n \tmovs\tr3, r7\n-\tlsrs\tr4, r0, #9\n+\tlsrs\tr0, r2, #9\n \tmovs\tr3, r7\n-\tlsrs\tr4, r2, #10\n+\tlsrs\tr0, r4, #10\n \tmovs\tr3, r7\n-\tlsrs\tr6, r6, #9\n+\tlsrs\tr2, r0, #10\n \tmovs\tr3, r7\n \tldrb\tr4, [r5, #29]\n \tlsls\tr7, r0, #1\n-\tldmia\tr4, {r1, r4, r5, r7}\n+\tldmia\tr4, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr2, r7\n-\tlsrs\tr4, r1, #10\n+\tlsrs\tr0, r3, #10\n \tmovs\tr3, r7\n-\tlsrs\tr6, r4, #13\n+\tlsrs\tr2, r6, #13\n \tmovs\tr3, r7\n \tldrb\tr4, [r2, #28]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr2, r4, #18\n+\tlsrs\tr6, r5, #18\n \tmovs\tr3, r7\n-\tlsrs\tr0, r5, #4\n+\tlsrs\tr4, r6, #4\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsrs\tr6, r0, #6\n+\tlsrs\tr2, r2, #6\n \tmovs\tr3, r7\n-\tlsrs\tr4, r1, #8\n+\tlsrs\tr0, r3, #8\n \tmovs\tr3, r7\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tadds\tr4, #38\t@ 0x26\n \tlsls\tr7, r0, #1\n-\tlsrs\tr2, r7, #32\n+\tlsrs\tr6, r0, #1\n \tmovs\tr3, r7\n-\tlsrs\tr0, r3, #17\n+\tlsrs\tr4, r4, #17\n \tmovs\tr3, r7\n mainPBCorrect(int, char**):\n ./src/modules/mod_mira.C:514\n \tmovs\tr0, #0\n \tbx\tlr\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n@@ -95185,92 +95185,92 @@\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr2, #70\t@ 0x46\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr0, r1, #11\n+\tlsrs\tr4, r2, #11\n \tmovs\tr3, r7\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #136\t@ 0x88\n+\tadd\tr5, sp, #168\t@ 0xa8\n \tmovs\tr3, r7\n \tldrb\tr4, [r3, #16]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr6, r2, #10\n+\tlsrs\tr2, r4, #10\n \tmovs\tr3, r7\n \tldrb\tr0, [r6, #15]\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tldrb\tr4, [r0, #15]\n \tlsls\tr7, r0, #1\n \tldrb\tr4, [r3, #13]\n \tlsls\tr7, r0, #1\n \tldrb\tr0, [r1, #13]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr6, r0, #12\n+\tlsrs\tr2, r2, #12\n \tmovs\tr3, r7\n-\tbics\tr6, r4\n+\tbics\tr2, r6\n \tmovs\tr3, r7\n \tit\tpl\n \tmovpl\tr2, r7\n \tldrb\tr2, [r5, #10]\n \tlsls\tr7, r0, #1\n \tldrb\tr0, [r3, #9]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr6, r1, #8\n+\tlsrs\tr2, r3, #8\n \tmovs\tr3, r7\n \tldrb\tr0, [r0, #7]\n \tlsls\tr7, r0, #1\n \tldrb\tr6, [r4, #6]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr6, r6, #9\n+\tlsrs\tr2, r0, #10\n \tmovs\tr3, r7\n \tldrb\tr0, [r1, #6]\n \tlsls\tr7, r0, #1\n-\tlsrs\tr2, r1, #10\n+\tlsrs\tr6, r2, #10\n \tmovs\tr3, r7\n \tldrb\tr6, [r5, #5]\n \tlsls\tr7, r0, #1\n \tldrb\tr0, [r7, #4]\n \tlsls\tr7, r0, #1\n \tldrb\tr2, [r2, #4]\n \tlsls\tr7, r0, #1\n \tldrb\tr4, [r6, #3]\n \tlsls\tr7, r0, #1\n \tldrb\tr6, [r4, #3]\n \tlsls\tr7, r0, #1\n \tldrb\tr2, [r1, #3]\n \tlsls\tr7, r0, #1\n-\tstmia\tr4!, {r1, r6, r7}\n+\tstmia\tr4!, {r1, r2, r3, r6, r7}\n \tmovs\tr2, r7\n-\tlsrs\tr6, r1, #7\n+\tlsrs\tr2, r3, #7\n \tmovs\tr3, r7\n \tcmp\tr6, #40\t@ 0x28\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsls\tr6, r7, #30\n+\tlsls\tr2, r1, #31\n \tmovs\tr3, r7\n-\tlsls\tr0, r3, #28\n+\tlsls\tr4, r4, #28\n \tmovs\tr3, r7\n-\tlsls\tr2, r4, #28\n+\tlsls\tr6, r5, #28\n \tmovs\tr3, r7\n-\t\t\t@ instruction: 0xe8d6003a\n-\tlsls\tr6, r2, #29\n+\tstrd\tr0, r0, [r2], #232\t@ 0xe8\n+\tlsls\tr2, r4, #29\n \tmovs\tr3, r7\n-\tlsls\tr0, r3, #31\n+\tlsls\tr4, r4, #31\n \tmovs\tr3, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr0, r4, #32\n+\tlsrs\tr4, r5, #32\n \tmovs\tr3, r7\n miraMain_extractContigs(int, char**):\n ./src/modules/mod_mira.C:294\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n \tldr\tr2, [pc, #200]\t@ (3a4c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6790>)\n \tvpush\t{d8}\n@@ -97135,68 +97135,69 @@\n \tlsls\tr7, r0, #1\n \tstrb\tr4, [r3, #17]\n \tlsls\tr7, r0, #1\n \tstrb\tr2, [r6, #16]\n \tlsls\tr7, r0, #1\n \tstrb\tr0, [r3, #16]\n \tlsls\tr7, r0, #1\n-\tlsls\tr4, r2, #21\n+\tlsls\tr0, r4, #21\n \tmovs\tr3, r7\n-\tlsls\tr6, r7, #17\n+\tlsls\tr2, r1, #18\n \tmovs\tr3, r7\n-\tlsls\tr4, r4, #15\n+\tlsls\tr0, r6, #15\n \tmovs\tr3, r7\n \t\t\t@ instruction: 0xb768\n \tmovs\tr2, r7\n-\tlsls\tr6, r3, #13\n+\tlsls\tr2, r5, #13\n \tmovs\tr3, r7\n-\tlsls\tr6, r6, #11\n+\tlsls\tr2, r0, #12\n \tmovs\tr3, r7\n-\tstr??.w\tr0, [ip, #61]\t@ 0x3d\n-\tlsls\tr2, r7, #7\n+\tldr??.w\tr0, [r4, #61]\t@ 0x3d\n+\tlsls\tr6, r0, #8\n \tmovs\tr3, r7\n-\tlsls\tr6, r0, #7\n+\tlsls\tr2, r2, #7\n \tmovs\tr3, r7\n-\tlsls\tr0, r4, #6\n+\tlsls\tr4, r5, #6\n \tmovs\tr3, r7\n-\t\t\t@ instruction: 0xf708003d\n-\tb.n\t3b4d0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x7798>\n+\t\t\t@ instruction: 0xf710003d\n+\tb.n\t3b4e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x77b0>\n \tmovs\tr2, r7\n-\tmovs\tr4, r6\n+\tlsls\tr0, r0, #1\n \tmovs\tr3, r7\n-\tpush\t{r2, r6, r7, lr}\n+\tpush\t{r2, r3, r6, r7, lr}\n \tmovs\tr5, r7\n-\tstr\tr0, [sp, #144]\t@ 0x90\n+\tstr\tr0, [sp, #176]\t@ 0xb0\n \tmovs\tr6, r7\n-\tvqadd.u8\td0, d4, d26\n-\tmrc2\t0, 0, r0, cr4, cr10, {1}\n-\t\t\t@ instruction: 0xf3d0003d\n-\tldrh\tr2, [r7, #46]\t@ 0x2e\n+\tvqadd.u16\td0, d0, d26\n+\tmcr2\t0, 1, r0, cr0, cr10, {1}\n+\t\t\t@ instruction: 0xf3d8003d\n+\tldrh\tr2, [r0, #48]\t@ 0x30\n \tmovs\tr6, r7\n-\tldc2l\t0, cr0, [r2, #-232]\t@ 0xffffff18\n-\tldc2\t0, cr0, [r4], #232\t@ 0xe8\n+\tldc2l\t0, cr0, [lr, #-232]\t@ 0xffffff18\n+\tstc2l\t0, cr0, [r0], {58}\t@ 0x3a\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tldc2\t0, cr0, [r6], #-232\t@ 0xffffff18\n-\tstc2\t0, cr0, [lr], #232\t@ 0xe8\n-\tmrc2\t0, 3, r0, cr0, cr10, {1}\n+\tmcrr2\t0, 3, r0, r2, cr10\n+\tldc2\t0, cr0, [sl], #232\t@ 0xe8\n+\tmrc2\t0, 3, r0, cr12, cr10, {1}\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmrc2\t0, 5, r0, cr10, cr10, {1}\n-\tvshr.u32\td0, d26, #6\n-\tvshr.u32\td16, d26, #12\n-\tlsls\tr4, r5, #2\n+\tmcr2\t0, 6, r0, cr6, cr10, {1}\n+\tvmvn.i32\td16, #234\t@ 0x000000ea\n+\tmovs\tr0, r0\n+\tmovs\tr3, r7\n+\tlsls\tr0, r7, #2\n \tmovs\tr3, r7\n /usr/include/c++/10/bits/basic_string.h:183\n \tldr\tr7, [sp, #16]\n /usr/include/c++/10/bits/char_traits.h:329\n \tmovs\tr3, #0\n /usr/include/c++/10/bits/basic_string.h:322\n \tmvn.w\tr1, #3221225472\t@ 0xc0000000\n@@ -98879,54 +98880,54 @@\n \tldr\tr6, [sp, #20]\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr2, [r4, #0]\n /usr/include/c++/10/bits/basic_string.tcc:232\n \tldr\tr6, [r6, #0]\n /usr/include/c++/10/bits/char_traits.h:402\n \tb.w\t3a7b6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a7e>\n-\tvshr.u16\td0, d26, #10\n+\tvshr.u32\td0, d26, #30\n \tadds\tr4, r1, #5\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstc2l\t0, cr0, [r2], {58}\t@ 0x3a\n-\tldrh\tr0, [r0, #8]\n-\tmovs\tr6, r7\n-\tstc2\t0, cr0, [lr], #-232\t@ 0xffffff18\n-\t\t\t@ instruction: 0xfbc4003a\n-\t\t\t@ instruction: 0xfbcc003a\n-\tldc\t0, cr0, [lr], #244\t@ 0xf4\n-\tstrh\tr4, [r4, #54]\t@ 0x36\n+\tstc2l\t0, cr0, [lr], {58}\t@ 0x3a\n+\tldrh\tr0, [r1, #8]\n \tmovs\tr6, r7\n+\tldc2\t0, cr0, [sl], #-232\t@ 0xffffff18\n \t\t\t@ instruction: 0xfbd0003a\n-\t\t\t@ instruction: 0xfb66003a\n-\t\t\t@ instruction: 0xfb3c003a\n-\t\t\t@ instruction: 0xf3c6003a\n-\t\t\t@ instruction: 0xf3ae003a\n-\t\t\t@ instruction: 0xf38e003a\n-\t\t\t@ instruction: 0xf36e003a\n-\t\t\t@ instruction: 0xf34e003a\n-\t\t\t@ instruction: 0xf32e003a\n-\t\t\t@ instruction: 0xf30e003a\n-\t\t\t@ instruction: 0xf2f2003a\n-\t\t\t@ instruction: 0xf2d2003a\n-\tvshr.s32\td16, d26, #12\n-\tvshr.s32\td16, d26, #10\n-\tmrc\t0, 3, r0, cr10, cr10, {1}\n-\tmrc\t0, 3, r0, cr14, cr10, {1}\n-\t\t\t@ instruction: 0xf3fa003a\n-\t\t\t@ instruction: 0xf3f2003a\n-\t\t\t@ instruction: 0xf53e003a\n-\tldrb\tr4, [r3, #30]\n+\t\t\t@ instruction: 0xfbd8003a\n+\tstcl\t0, cr0, [r6], {61}\t@ 0x3d\n+\tstrh\tr4, [r5, #54]\t@ 0x36\n \tmovs\tr6, r7\n-\t\t\t@ instruction: 0xf4f0003a\n-\teor.w\tr0, sl, #12189696\t@ 0xba0000\n+\t\t\t@ instruction: 0xfbdc003a\n+\t\t\t@ instruction: 0xfb72003a\n+\t\t\t@ instruction: 0xfb48003a\n+\t\t\t@ instruction: 0xf3d2003a\n+\t\t\t@ instruction: 0xf3ba003a\n+\t\t\t@ instruction: 0xf39a003a\n+\t\t\t@ instruction: 0xf37a003a\n+\t\t\t@ instruction: 0xf35a003a\n+\t\t\t@ instruction: 0xf33a003a\n+\t\t\t@ instruction: 0xf31a003a\n+\t\t\t@ instruction: 0xf2fe003a\n+\t\t\t@ instruction: 0xf2de003a\n+\tand.w\tr0, r0, #58\t@ 0x3a\n+\tand.w\tr0, r2, #58\t@ 0x3a\n+\tmcr\t0, 4, r0, cr6, cr10, {1}\n+\tmcr\t0, 4, r0, cr10, cr10, {1}\n+\tand.w\tr0, r6, #12189696\t@ 0xba0000\n+\t\t\t@ instruction: 0xf3fe003a\n+\tadc.w\tr0, sl, #12189696\t@ 0xba0000\n+\tldrb\tr4, [r4, #30]\n+\tmovs\tr6, r7\n+\t\t\t@ instruction: 0xf4fc003a\n \teors.w\tr0, r6, #12189696\t@ 0xba0000\n+\t\t\t@ instruction: 0xf4a2003a\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.tcc:219\n \tmov\tr1, r0\n \tldr\tr0, [sp, #28]\n \tblx\tb838 , std::allocator >::_M_create(unsigned int&, unsigned int)@plt>\n /usr/include/c++/10/bits/basic_string.h:211\n@@ -99805,103 +99806,103 @@\n \tcmp\tr0, r7\n \tbne.n\t3c4e4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x87ac>\n \tb.n\t3c2de , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x85a6>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t3c510 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x87d8>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\torn\tr0, r4, #58\t@ 0x3a\n-\t\t\t@ instruction: 0xf27c003a\n+\torns\tr0, r0, #58\t@ 0x3a\n+\t\t\t@ instruction: 0xf288003a\n \tldr\tr5, [sp, #200]\t@ 0xc8\n \tmovs\tr2, r7\n-\tldmia\tr2, {r2, r3, r5}\n+\tldmia\tr2!, {r3, r4, r5}\n \tmovs\tr2, r7\n-\tldmia\tr2!, {r1, r5}\n+\tldmia\tr2, {r1, r2, r3, r5}\n \tmovs\tr2, r7\n-\tldmia\tr2!, {r3, r4}\n+\tldmia\tr2, {r2, r5}\n \tmovs\tr2, r7\n-\tldmia\tr2, {r1, r2, r3}\n+\tldmia\tr2!, {r1, r3, r4}\n \tmovs\tr2, r7\n-\tldmia\tr2, {r2}\n+\tldmia\tr2!, {r4}\n \tmovs\tr2, r7\n-\tldmia\tr1, {r1, r3, r4, r5, r6, r7}\n+\tldmia\tr2, {r1, r2}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r5, r6, r7}\n+\tldmia\tr1!, {r2, r4, r5, r6, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1, {r1, r3, r4, r6, r7}\n+\tldmia\tr1, {r1, r2, r5, r6, r7}\n \tmovs\tr2, r7\n \tldr\tr4, [sp, #816]\t@ 0x330\n \tmovs\tr2, r7\n-\tldmia\tr1, {r1, r2, r6, r7}\n+\tldmia\tr1, {r1, r4, r6, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r4, r5, r7}\n+\tldmia\tr1!, {r2, r6, r7}\n \tmovs\tr2, r7\n \tldr\tr4, [sp, #680]\t@ 0x2a8\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r2, r5, r7}\n+\tldmia\tr1!, {r4, r5, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1, {r1, r3, r4, r7}\n+\tldmia\tr1, {r1, r2, r5, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r4, r7}\n+\tldmia\tr1!, {r2, r3, r4, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r7}\n+\tldmia\tr1!, {r2, r4, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r7}\n+\tldmia\tr1!, {r2, r3, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r4, r5, r6}\n+\tldmia\tr1!, {r2, r7}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r4, r5, r6}\n+\tldmia\tr1!, {r2, r3, r4, r5, r6}\n \tmovs\tr2, r7\n \tldr\tr4, [sp, #400]\t@ 0x190\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r5, r6}\n+\tldmia\tr1!, {r2, r3, r5, r6}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r4, r6}\n+\tldmia\tr1!, {r2, r5, r6}\n \tmovs\tr2, r7\n \tldr\tr4, [sp, #304]\t@ 0x130\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r6}\n+\tldmia\tr1!, {r2, r4, r6}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r6}\n+\tldmia\tr1!, {r2, r3, r6}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r4, r5}\n+\tldmia\tr1!, {r2, r6}\n \tmovs\tr2, r7\n \tldr\tr4, [sp, #176]\t@ 0xb0\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3, r5}\n+\tldmia\tr1!, {r2, r4, r5}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r5}\n+\tldmia\tr1!, {r2, r3, r5}\n \tmovs\tr2, r7\n \tldr\tr4, [sp, #80]\t@ 0x50\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r4}\n+\tldmia\tr1!, {r2, r3, r4}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {r3}\n+\tldmia\tr1!, {r2, r4}\n \tmovs\tr2, r7\n-\tldmia\tr1!, {}\n+\tldmia\tr1!, {r2, r3}\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r3, r4, r5, r6, r7}\n+\tldmia\tr1!, {r2}\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r4, r5, r6, r7}\n+\tldmia\tr0!, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r3, r5, r6, r7}\n+\tldmia\tr0!, {r2, r4, r5, r6, r7}\n \tmovs\tr2, r7\n \tldr\tr3, [sp, #880]\t@ 0x370\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r3, r4, r6, r7}\n+\tldmia\tr0!, {r2, r5, r6, r7}\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r2, r3, r6, r7}\n+\tldmia\tr0!, {r3, r4, r6, r7}\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r2, r6, r7}\n+\tldmia\tr0!, {r4, r6, r7}\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r2, r3, r4, r5, r7}\n+\tldmia\tr0!, {r3, r6, r7}\n \tmovs\tr2, r7\n \tldr\tr3, [sp, #704]\t@ 0x2c0\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r2, r3, r5, r7}\n+\tldmia\tr0!, {r3, r4, r5, r7}\n \tmovs\tr2, r7\n \tldr\tr3, [sp, #640]\t@ 0x280\n \tmovs\tr2, r7\n \tldr\tr3, [sp, #608]\t@ 0x260\n \tmovs\tr2, r7\n miraMain_launchWrapped(int, char**):\n ./src/modules/mod_mira.C:444\n@@ -100694,55 +100695,55 @@\n \t...\n \tlsrs\tr2, r4, #5\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr6, r2, #5\n \tlsls\tr7, r0, #1\n-\tsub.w\tr0, r4, sl, rrx\n+\tsubs.w\tr0, r0, sl, rrx\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldc\t0, cr0, [r4, #-232]\t@ 0xffffff18\n-\tmrrc\t0, 3, r0, ip, cr10\n-\tldr\tr5, [sp, #184]\t@ 0xb8\n+\tstc\t0, cr0, [r0, #-232]!\t@ 0xffffff18\n+\tstcl\t0, cr0, [r8], #-232\t@ 0xffffff18\n+\tldr\tr5, [sp, #232]\t@ 0xe8\n \tmovs\tr2, r7\n-\tadds.w\tr0, lr, sl, rrx\n+\t\t\t@ instruction: 0xeb2a003a\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd.w\tr0, r6, sl, rrx\n-\tand.w\tr0, r0, sl, rrx\n+\tadds.w\tr0, r2, sl, rrx\n+\tand.w\tr0, ip, sl, rrx\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe8c6003a\n-\tstmia.w\tr8!, {r1, r3, r4, r5}\n+\t\t\t@ instruction: 0xe8d2003a\n+\tldmia.w\tr4!, {r1, r3, r4, r5}\n \tlsls\tr2, r0, #21\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r1, r2, r3, r4, r5}\n+\tstmia\tr0!, {r1, r3, r6}\n \tmovs\tr2, r7\n-\tstmia\tr0!, {r1, r2, r4, r5}\n+\tstmia\tr0!, {r1, r6}\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xe804003a\n-\tldr\tr2, [sp, #672]\t@ 0x2a0\n+\t\t\t@ instruction: 0xe810003a\n+\tldr\tr2, [sp, #720]\t@ 0x2d0\n \tmovs\tr2, r7\n-\tb.n\t3cc04 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x8ecc>\n+\tb.n\t3cc1c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x8ee4>\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xe812003a\n-\t\t\t@ instruction: 0xe810003a\n+\t\t\t@ instruction: 0xe81e003a\n+\t\t\t@ instruction: 0xe81c003a\n \tb.n\t3cc3c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x8f04>\n ./src/modules/mod_mira.C:477 (discriminator 9)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n ./src/modules/mod_mira.C:477 (discriminator 13)\n \tmov\tr0, sl\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n@@ -100959,15 +100960,15 @@\n \tnop\n \tlsls\tr2, r1, #10\n \tlsls\tr7, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r5, #8\n \tlsls\tr7, r0, #1\n-\tpop\t{r1, r2, r3, r7, pc}\n+\tpop\t{r1, r3, r4, r7, pc}\n \tmovs\tr2, r7\n \tstr\tr0, [sp, #504]\t@ 0x1f8\n \tmovs\tr2, r7\n ConvPro::contig__nameordercomp(Contig const&, Contig const&):\n ./src/modules/mod_convert.C:715\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr5, r1\n@@ -101952,59 +101953,59 @@\n /usr/include/c++/10/bits/basic_ios.h:158\n \torr.w\tr1, r3, #1\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t3d292 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x955a>\n \tldc2l\t0, cr0, [r8], #280\t@ 0x118\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t3d97c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9c44>\n+\tb.n\t3d994 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9c5c>\n \tmovs\tr2, r7\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n-\tb.n\t3d96c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9c34>\n+\tb.n\t3d984 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9c4c>\n \tmovs\tr2, r7\n-\tb.n\t3da28 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9cf0>\n+\tb.n\t3da40 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9d08>\n \tmovs\tr2, r7\n-\tb.n\t3db4c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9e14>\n+\tb.n\t3db64 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9e2c>\n \tmovs\tr2, r7\n-\tb.n\t3db4c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9e14>\n+\tb.n\t3db64 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9e2c>\n \tmovs\tr2, r7\n-\tb.n\t3ce64 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x912c>\n+\tb.n\t3ce7c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9144>\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xeb28003a\n-\tadc.w\tr0, lr, sl, rrx\n-\tstcl\t0, cr0, [r6], #232\t@ 0xe8\n-\tldc\t0, cr0, [lr, #-232]\t@ 0xffffff18\n-\tstcl\t0, cr0, [lr, #232]!\t@ 0xe8\n-\tmcr\t0, 6, r0, cr0, cr10, {1}\n-\tvshr.s32\td16, d26, #32\n-\torr.w\tr0, r8, #58\t@ 0x3a\n-\teors.w\tr0, r8, #58\t@ 0x3a\n-\t\t\t@ instruction: 0xf0dc003a\n-\tadd.w\tr0, r0, #58\t@ 0x3a\n-\trsb\tr0, r0, #58\t@ 0x3a\n-\t\t\t@ instruction: 0xf268003a\n-\t\t\t@ instruction: 0xf308003a\n-\t\t\t@ instruction: 0xf3f8003a\n-\torn\tr0, r0, #12189696\t@ 0xba0000\n-\tadd.w\tr0, ip, #12189696\t@ 0xba0000\n-\t\t\t@ instruction: 0xf522003a\n-\tmovw\tr0, #59450\t@ 0xe83a\n-\t\t\t@ instruction: 0xf73a003a\n-\t\t\t@ instruction: 0xf798003a\n-\tldrsh.w\tr0, [ip, #58]\t@ 0x3a\n-\tldr??.w\tr0, [lr, #58]\t@ 0x3a\n-\t\t\t@ instruction: 0xfb0e003a\n-\t\t\t@ instruction: 0xfbd2003a\n-\tstc2\t0, cr0, [sl], {58}\t@ 0x3a\n-\tldc2l\t0, cr0, [r2, #-232]\t@ 0xffffff18\n-\tstc2\t0, cr0, [r2, #232]!\t@ 0xe8\n-\tmcr2\t0, 1, r0, cr14, cr10, {1}\n-\tmcr2\t0, 6, r0, cr10, cr10, {1}\n-\tvshr.u8\td0, d26, #6\n+\t\t\t@ instruction: 0xeb34003a\n+\tadcs.w\tr0, sl, sl, rrx\n+\tldcl\t0, cr0, [r2], #232\t@ 0xe8\n+\tstc\t0, cr0, [sl, #-232]!\t@ 0xffffff18\n+\tldcl\t0, cr0, [sl, #232]!\t@ 0xe8\n+\tmcr\t0, 6, r0, cr12, cr10, {1}\n+\tvshr.s32\td16, d26, #20\n+\torrs.w\tr0, r4, #58\t@ 0x3a\n+\t\t\t@ instruction: 0xf0a4003a\n+\t\t\t@ instruction: 0xf0e8003a\n+\tadd.w\tr0, ip, #58\t@ 0x3a\n+\trsb\tr0, ip, #58\t@ 0x3a\n+\t\t\t@ instruction: 0xf274003a\n+\t\t\t@ instruction: 0xf314003a\n+\tand.w\tr0, r4, #12189696\t@ 0xba0000\n+\torn\tr0, ip, #12189696\t@ 0xba0000\n+\tadds.w\tr0, r8, #12189696\t@ 0xba0000\n+\t\t\t@ instruction: 0xf52e003a\n+\t\t\t@ instruction: 0xf65a003a\n+\t\t\t@ instruction: 0xf746003a\n+\t\t\t@ instruction: 0xf7a4003a\n+\tvst1.8\t\t\t@ instruction: 0xf9c8003a\n+\t\t\t@ instruction: 0xfa0a003a\n+\tsmlatt\tr0, sl, sl, r0\n+\t\t\t@ instruction: 0xfbde003a\n+\tldc2\t0, cr0, [r6], {58}\t@ 0x3a\n+\tldc2l\t0, cr0, [lr, #-232]\t@ 0xffffff18\n+\tstc2\t0, cr0, [lr, #232]!\t@ 0xe8\n+\tmrc2\t0, 1, r0, cr10, cr10, {1}\n+\tmrc2\t0, 6, r0, cr6, cr10, {1}\n+\tvshr.u16\td0, d26, #10\n ConvPro::specialTestCode(std::__cxx11::list >&, ReadPool&):\n ./src/modules/mod_convert.C:577\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr1, [pc, #1624]\t@ 3db68 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9e30>\n \tvpush\t{d8-d9}\n \tsub\tsp, #196\t@ 0xc4\n \tldr.w\tr2, [pc, #1620]\t@ 3db6c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9e34>\n@@ -102763,34 +102764,34 @@\n \tblx\tb310 \n \tnop.w\n \t...\n \t\t\t@ instruction: 0xfa460046\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xfa3a0046\n-\tvqadd.u8\td16, d6, d26\n-\tvqadd.u16\td16, d0, d26\n-\tlsrs\tr6, r0, #2\n+\tvqadd.u16\td16, d2, d26\n+\tvqadd.u16\td16, d12, d26\n+\tlsrs\tr6, r1, #2\n \tmovs\tr4, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmrc2\t0, 5, r0, cr12, cr10, {1}\n-\t\t\t@ instruction: 0xb8da\n+\tmcr2\t0, 6, r0, cr8, cr10, {1}\n+\t\t\t@ instruction: 0xb8e2\n \tmovs\tr4, r7\n-\tmcr2\t0, 1, r0, cr12, cr10, {1}\n-\tmcr2\t0, 1, r0, cr14, cr10, {1}\n-\tldc2l\t0, cr0, [r8, #-232]\t@ 0xffffff18\n-\tstc2l\t0, cr0, [r4, #-232]\t@ 0xffffff18\n-\tldc2\t0, cr0, [ip], #-232\t@ 0xffffff18\n+\tmrc2\t0, 1, r0, cr8, cr10, {1}\n+\tmrc2\t0, 1, r0, cr10, cr10, {1}\n+\tstc2l\t0, cr0, [r4, #-232]!\t@ 0xffffff18\n+\tldc2l\t0, cr0, [r0, #-232]\t@ 0xffffff18\n+\tmcrr2\t0, 3, r0, r8, cr10\n \t\t\t@ instruction: 0xf5fc0046\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsls\tr0, r2, #12\n+\tlsls\tr0, r3, #12\n \tmovs\tr4, r7\n-\tlsls\tr4, r7, #11\n+\tlsls\tr4, r0, #12\n \tmovs\tr4, r7\n /usr/include/c++/10/bits/stl_vector.h:680\n \tmov\tr4, r0\n \tmov\tr8, r1\n \tldr\tr0, [sp, #32]\n /usr/include/c++/10/bits/stl_vector.h:336\n \tldr\tr5, [sp, #40]\t@ 0x28\n@@ -102885,15 +102886,15 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tlsls\tr1, r3, #2\n \tmov\tr8, sl\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tb.n\t3dc14 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9edc>\n-\tldrsh.w\tr0, [r8, sl, lsl #3]\n+\tvst4.8\t{d16-d19}, [r4 :256], sl\n ConvPro::closeOpenStreams(std::__cxx11::list >*, std::allocator >*> >&):\n ./src/modules/mod_convert.C:1527\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr5, r0\n /usr/include/c++/10/bits/stl_list.h:946\n \tldr\tr4, [r0, #0]\n ./src/modules/mod_convert.C:1528\n@@ -103185,18 +103186,18 @@\n \tb.n\t3de5a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xa122>\n \tnop\n \t\t\t@ instruction: 0xf1f20046\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf1e40046\n \tsubs.w\tr0, r0, #70\t@ 0x46\n-\tstmia\tr2!, {r2, r3, r5, r6}\n+\tstmia\tr2!, {r3, r4, r5, r6}\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xf766003a\n-\t\t\t@ instruction: 0xf7b8003a\n+\t\t\t@ instruction: 0xf772003a\n+\t\t\t@ instruction: 0xf7c4003a\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ConvPro::openIFStream(std::basic_ifstream >&, std::__cxx11::basic_string, std::allocator >, std::_Ios_Openmode):\n ./src/modules/mod_convert.C:1543\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -103348,18 +103349,18 @@\n \tb.n\t3df92 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xa25a>\n \tnop\n \t\t\t@ instruction: 0xf0ba0046\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf0ac0046\n \torns\tr0, r8, #70\t@ 0x46\n-\tstmia\tr1!, {r2, r4, r5}\n+\tstmia\tr1!, {r6}\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xf70e003a\n-\t\t\t@ instruction: 0xf680003a\n+\t\t\t@ instruction: 0xf71a003a\n+\t\t\t@ instruction: 0xf68c003a\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ConvPro::closeOFSList(unsigned int, std::__cxx11::list >*, std::allocator >*> >&):\n ./src/modules/mod_convert.C:1473\n \tldr\tr2, [pc, #472]\t@ (3e1b0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xa478>)\n@@ -103627,16 +103628,16 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs.w\tr0, ip, #12189696\t@ 0xba0000\n-\tsub.w\tr0, r8, #12189696\t@ 0xba0000\n+\trsb\tr0, r8, #12189696\t@ 0xba0000\n+\tsubs.w\tr0, r4, #12189696\t@ 0xba0000\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ConvPro::discardShortReads(std::vector >&, ReadPool&, unsigned int, bool):\n ./src/modules/mod_convert.C:684\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n@@ -103955,15 +103956,15 @@\n \tstcl\t0, cr0, [lr], {70}\t@ 0x46\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstcl\t0, cr0, [r6], {70}\t@ 0x46\n \tstc\t0, cr0, [r0], #-280\t@ 0xfffffee8\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tadd\tr7, pc, #128\t@ (adr r7, 3e4a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xa768>)\n+\tadd\tr7, pc, #176\t@ (adr r7, 3e4d0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xa798>)\n \tmovs\tr2, r7\n \tldrb\tr0, [r2, #8]\n \tmovs\tr2, r7\n ConvPro::openOFSlist(Contig*, std::__cxx11::list >*, std::allocator >*> >&):\n ./src/modules/mod_convert.C:1427\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_list.h:1056\n@@ -104596,79 +104597,79 @@\n \tadds.w\tr0, r8, r6, lsl #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tadds\tr5, #214\t@ 0xd6\n \tlsls\tr7, r0, #1\n \tadds\tr5, #210\t@ 0xd2\n \tlsls\tr7, r0, #1\n-\t\t\t@ instruction: 0xf2ee003a\n-\tstmia\tr7!, {r1, r2, r3}\n+\t\t\t@ instruction: 0xf2fa003a\n+\tstmia\tr7!, {r1, r3, r4}\n \tmovs\tr2, r7\n \tadds\tr5, #156\t@ 0x9c\n \tlsls\tr7, r0, #1\n-\tpop\t{r2, r5, r7}\n+\tpop\t{r4, r5, r7}\n \tmovs\tr2, r7\n \tadds\tr5, #98\t@ 0x62\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tsub.w\tr0, sl, #58\t@ 0x3a\n-\tsub.w\tr0, r0, #58\t@ 0x3a\n+\tsubs.w\tr0, r6, #58\t@ 0x3a\n+\tsub.w\tr0, ip, #58\t@ 0x3a\n \tadds\tr4, #84\t@ 0x54\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsbc.w\tr0, sl, #58\t@ 0x3a\n+\tsbcs.w\tr0, r6, #58\t@ 0x3a\n \tadds\tr4, #6\n \tlsls\tr7, r0, #1\n-\tcbnz\tr6, 3e9a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xac6c>\n+\tcbnz\tr2, 3e9a8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xac70>\n \tmovs\tr2, r7\n-\tadc.w\tr0, r0, #58\t@ 0x3a\n-\tldrh\tr0, [r5, #20]\n+\tadc.w\tr0, ip, #58\t@ 0x3a\n+\tldrh\tr0, [r6, #20]\n \tmovs\tr4, r7\n-\tadd\tr4, pc, #896\t@ (adr r4, 3ecec , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xafb4>)\n+\tadd\tr4, pc, #928\t@ (adr r4, 3ed0c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xafd4>)\n \tmovs\tr4, r7\n \tadds\tr3, #184\t@ 0xb8\n \tlsls\tr7, r0, #1\n \tldmia.w\tip!, {r1, r2, r6}\n \tadds\tr3, #116\t@ 0x74\n \tlsls\tr7, r0, #1\n-\t\t\t@ instruction: 0xf0ae003a\n-\tstmia\tr4!, {r4, r5, r6}\n+\t\t\t@ instruction: 0xf0ba003a\n+\tstmia\tr4!, {r2, r3, r4, r5, r6}\n \tmovs\tr2, r7\n \tadds\tr3, #62\t@ 0x3e\n \tlsls\tr7, r0, #1\n-\tldmia\tr2!, {r1, r4, r6}\n+\tldmia\tr2, {r1, r2, r3, r4, r6}\n \tmovs\tr2, r7\n-\tadd\tr4, sp, #976\t@ 0x3d0\n+\tadd\tr5, sp, #0\n \tmovs\tr2, r7\n-\tstmia\tr4!, {r1, r4, r5}\n+\tstmia\tr4!, {r1, r2, r3, r4, r5}\n \tmovs\tr2, r7\n \tadds\tr2, #246\t@ 0xf6\n \tlsls\tr7, r0, #1\n-\thlt\t0x0004\n+\thlt\t0x000c\n \tmovs\tr5, r7\n-\tvqadd.s32\td16, d14, d26\n-\tvqadd.s16\td16, d12, d26\n+\tvqadd.s64\td16, d10, d26\n+\tvqadd.s32\td16, d8, d26\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tvmvn.i32\td16, #74\t@ 0x0000004a\n-\tvshr.s32\td0, d26, #4\n-\tvshr.s32\td0, d26, #18\n-\tstmia\tr3!, {r2, r4, r6}\n+\tvshr.s16\td16, d26, #16\n+\tvshr.s8\td16, d26, #8\n+\tvshr.s32\td0, d26, #6\n+\tstmia\tr3!, {r5, r6}\n \tmovs\tr2, r7\n \tadds\tr1, #248\t@ 0xf8\n \tlsls\tr7, r0, #1\n-\tvqadd.s32\td16, d12, d26\n+\tvqadd.s64\td16, d8, d26\n ConvPro::saveContigList_helper(std::__cxx11::list >&, ReadPool&):\n ./src/modules/mod_convert.C:757\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n ./src/modules/mod_convert.C:760\n \tldr.w\tr4, [pc, #3208]\t@ 3f650 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb918>\n ./src/modules/mod_convert.C:757\n@@ -106443,153 +106444,153 @@\n \tlsls\tr7, r0, #1\n \tcmp\tr7, #184\t@ 0xb8\n \tlsls\tr7, r0, #1\n \tcmp\tr7, #180\t@ 0xb4\n \tlsls\tr7, r0, #1\n \tcmp\tr7, #158\t@ 0x9e\n \tlsls\tr7, r0, #1\n-\tvld4.8\t{d16-d19}, [r0 :256]\n-\tadd\tr1, sp, #320\t@ 0x140\n+\tvld4.8\t{d16-d19}, [r8 :256]\n+\tadd\tr1, sp, #368\t@ 0x170\n \tmovs\tr2, r7\n-\tstc\t0, cr0, [r0, #232]\t@ 0xe8\n+\tstc\t0, cr0, [ip, #232]\t@ 0xe8\n \tcmp\tr7, #82\t@ 0x52\n \tlsls\tr7, r0, #1\n \tcmp\tr7, #32\n \tlsls\tr7, r0, #1\n-\tldc\t0, cr0, [sl, #-232]\t@ 0xffffff18\n+\tstc\t0, cr0, [r6, #-232]!\t@ 0xffffff18\n \tstrb.w\tr0, [r2, #70]\t@ 0x46\n-\tldc\t0, cr0, [r0], #232\t@ 0xe8\n+\tldc\t0, cr0, [ip], #232\t@ 0xe8\n \tcmp\tr6, #110\t@ 0x6e\n \tlsls\tr7, r0, #1\n \tcmp\tr6, #62\t@ 0x3e\n \tlsls\tr7, r0, #1\n-\tpush\t{r1, r5, r6, lr}\n+\tpush\t{r1, r3, r5, r6, lr}\n \tmovs\tr5, r7\n \t\t\t@ instruction: 0xf7c40046\n \tcmp\tr5, #222\t@ 0xde\n \tlsls\tr7, r0, #1\n-\tpush\t{r3, lr}\n+\tpush\t{r4, lr}\n \tmovs\tr5, r7\n \t\t\t@ instruction: 0xf7680046\n \tcmp\tr5, #114\t@ 0x72\n \tlsls\tr7, r0, #1\n \tb.n\t3fbb8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbe80>\n \tlsls\tr6, r0, #1\n-\tsbc.w\tr0, r8, sl, rrx\n+\tsbcs.w\tr0, r4, sl, rrx\n \tcmp\tr5, #30\n \tlsls\tr7, r0, #1\n \tcmp\tr4, #234\t@ 0xea\n \tlsls\tr7, r0, #1\n-\tpush\t{r4}\n+\tpush\t{r3, r4}\n \tmovs\tr5, r7\n \t\t\t@ instruction: 0xf66e0046\n-\teors.w\tr0, sl, sl, rrx\n+\t\t\t@ instruction: 0xeaa6003a\n \taddw\tr0, r6, #2118\t@ 0x846\n-\tcbz\tr0, 3f73e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xba06>\n+\tcbz\tr0, 3f740 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xba08>\n \tmovs\tr5, r7\n-\tbic.w\tr0, r2, sl, rrx\n+\tbic.w\tr0, lr, sl, rrx\n \tcmp\tr3, #210\t@ 0xd2\n \tlsls\tr7, r0, #1\n \tcmp\tr3, #154\t@ 0x9a\n \tlsls\tr7, r0, #1\n-\tuxth\tr6, r1\n+\tuxth\tr6, r2\n \tmovs\tr5, r7\n \tcmp\tr3, #18\n \tlsls\tr7, r0, #1\n-\tsxtb\tr0, r4\n+\tsxtb\tr0, r5\n \tmovs\tr5, r7\n \tcmp\tr2, #210\t@ 0xd2\n \tlsls\tr7, r0, #1\n-\tsxth\tr0, r4\n+\tsxth\tr0, r5\n \tmovs\tr5, r7\n \tcmp\tr2, #152\t@ 0x98\n \tlsls\tr7, r0, #1\n-\tcbz\tr6, 3f744 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xba0c>\n+\tcbz\tr6, 3f746 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xba0e>\n \tmovs\tr5, r7\n \tbics.w\tr0, sl, #12976128\t@ 0xc60000\n \tbic.w\tr0, r2, #12976128\t@ 0xc60000\n \tcmp\tr1, #244\t@ 0xf4\n \tlsls\tr7, r0, #1\n \tcmp\tr1, #218\t@ 0xda\n \tlsls\tr7, r0, #1\n-\tcbz\tr2, 3f722 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb9ea>\n+\tcbz\tr2, 3f724 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb9ec>\n \tmovs\tr5, r7\n-\tsub\tsp, #144\t@ 0x90\n+\tsub\tsp, #176\t@ 0xb0\n \tmovs\tr5, r7\n-\tb.n\t3f600 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb8c8>\n+\tb.n\t3f618 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb8e0>\n \tmovs\tr2, r7\n \tcmp\tr1, #18\n \tlsls\tr7, r0, #1\n \tcmp\tr0, #220\t@ 0xdc\n \tlsls\tr7, r0, #1\n-\tadd\tr7, sp, #840\t@ 0x348\n+\tadd\tr7, sp, #872\t@ 0x368\n \tmovs\tr5, r7\n \t\t\t@ instruction: 0xf2320046\n-\tadd\tr7, sp, #312\t@ 0x138\n+\tadd\tr7, sp, #344\t@ 0x158\n \tmovs\tr5, r7\n \tmovs\tr7, #206\t@ 0xce\n \tlsls\tr7, r0, #1\n-\tadd\tr7, sp, #40\t@ 0x28\n+\tadd\tr7, sp, #72\t@ 0x48\n \tmovs\tr5, r7\n \tmovs\tr7, #138\t@ 0x8a\n \tlsls\tr7, r0, #1\n-\tadd\tr6, sp, #864\t@ 0x360\n+\tadd\tr6, sp, #896\t@ 0x380\n \tmovs\tr5, r7\n \tmovs\tr7, #74\t@ 0x4a\n \tlsls\tr7, r0, #1\n-\tadd\tr6, sp, #584\t@ 0x248\n+\tadd\tr6, sp, #616\t@ 0x268\n \tmovs\tr5, r7\n-\t\t\t@ instruction: 0xb85a\n+\t\t\t@ instruction: 0xb866\n \tmovs\tr2, r7\n \tmovs\tr6, #246\t@ 0xf6\n \tlsls\tr7, r0, #1\n-\torr.w\tr0, ip, fp, rrx\n+\torrs.w\tr0, r4, fp, rrx\n \teor.w\tr0, r6, #70\t@ 0x46\n \tmovs\tr6, #172\t@ 0xac\n \tlsls\tr7, r0, #1\n-\tb.n\t3ff48 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc210>\n+\tb.n\t3ff60 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc228>\n \tmovs\tr2, r7\n-\tb.n\t3ef78 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb240>\n+\tb.n\t3ef90 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xb258>\n \tmovs\tr2, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #368\t@ 0x170\n+\tadd\tr5, sp, #400\t@ 0x190\n \tmovs\tr5, r7\n-\tstrd\tr0, r0, [lr, #-236]\t@ 0xec\n-\tb.n\t3fd2c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbff4>\n+\tldrd\tr0, r0, [r6, #-236]\t@ 0xec\n+\tb.n\t3fd44 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc00c>\n \tmovs\tr2, r7\n-\tldrb\tr4, [r3, #17]\n+\tldrb\tr4, [r4, #17]\n \tmovs\tr4, r7\n \tmovs\tr5, #122\t@ 0x7a\n \tlsls\tr7, r0, #1\n-\t\t\t@ instruction: 0xe8ce003b\n+\t\t\t@ instruction: 0xe8d6003b\n \tvhadd.s8\tq0, q4, q3\n \tmovs\tr5, #46\t@ 0x2e\n \tlsls\tr7, r0, #1\n-\tstrd\tr0, r0, [lr], #-236\t@ 0xec\n-\tpush\t{r4, r5, r6, r7, lr}\n+\tldrd\tr0, r0, [r6], #-236\t@ 0xec\n+\tpush\t{r2, r3, r4, r5, r6, r7, lr}\n \tmovs\tr2, r7\n-\tb.n\t3fc04 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbecc>\n+\tb.n\t3fc1c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbee4>\n \tmovs\tr2, r7\n-\tb.n\t3fbf0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbeb8>\n+\tb.n\t3fc08 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbed0>\n \tmovs\tr2, r7\n-\tpush\t{r3, r6, r7, lr}\n+\tpush\t{r2, r4, r6, r7, lr}\n \tmovs\tr2, r7\n-\tpush\t{r2, r3, r4, r7, lr}\n+\tpush\t{r3, r5, r7, lr}\n \tmovs\tr2, r7\n \tmovs\tr4, #128\t@ 0x80\n \tlsls\tr7, r0, #1\n-\tb.n\t3fcbc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbf84>\n+\tb.n\t3fcd4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbf9c>\n \tmovs\tr2, r7\n \tcdp\t0, 0, cr0, cr14, cr6, {2}\n \tmovs\tr4, #52\t@ 0x34\n \tlsls\tr7, r0, #1\n-\tb.n\t3fc38 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbf00>\n+\tb.n\t3fc50 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbf18>\n \tmovs\tr2, r7\n /usr/include/c++/10/bits/basic_string.h:6187\n \tldr.w\tr1, [pc, #2984]\t@ 40370 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc638>\n \tmov\tr0, r9\n \tadd\tr1, pc\n \tblx\tbb30 , std::allocator >::compare(char const*) const@plt>\n ./src/modules/mod_convert.C:1034\n@@ -108234,138 +108235,138 @@\n \tb.n\t402f6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc5be>\n \tb.n\t402f6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc5be>\n \tb.n\t4025a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc522>\n \tb.n\t402f6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc5be>\n \tb.n\t402f6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc5be>\n \tb.n\t402f6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc5be>\n \tb.n\t4027a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc542>\n-\tb.n\t40530 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc7f8>\n+\tb.n\t40548 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc810>\n \tmovs\tr2, r7\n \tmovs\tr2, #100\t@ 0x64\n \tlsls\tr7, r0, #1\n-\tadd\tr1, sp, #592\t@ 0x250\n+\tadd\tr1, sp, #624\t@ 0x270\n \tmovs\tr5, r7\n \t\t\t@ instruction: 0xebee0046\n-\tadd\tr1, sp, #312\t@ 0x138\n+\tadd\tr1, sp, #344\t@ 0x158\n \tmovs\tr5, r7\n-\tuxtb\tr6, r4\n+\tuxtb\tr2, r6\n \tmovs\tr2, r7\n-\tcbz\tr6, 403d2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc69a>\n+\tcbz\tr2, 403d6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc69e>\n \tmovs\tr2, r7\n \tmovs\tr1, #174\t@ 0xae\n \tlsls\tr7, r0, #1\n-\tb.n\t3fd90 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc058>\n+\tb.n\t3fda0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc068>\n \tmovs\tr3, r7\n \t\t\t@ instruction: 0xeb3a0046\n-\tb.n\t3fd0c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbfd4>\n+\tb.n\t3fd1c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbfe4>\n \tmovs\tr3, r7\n-\tldr\tr2, [sp, #896]\t@ 0x380\n+\tldr\tr2, [sp, #944]\t@ 0x3b0\n \tmovs\tr2, r7\n \t\t\t@ instruction: 0xeae60046\n \tmovs\tr0, #250\t@ 0xfa\n \tlsls\tr7, r0, #1\n-\tb.n\t3fc44 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbf0c>\n+\tb.n\t3fc54 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbf1c>\n \tmovs\tr3, r7\n \teor.w\tr0, r6, r6, lsl #1\n \tmovs\tr0, #172\t@ 0xac\n \tlsls\tr7, r0, #1\n-\tb.n\t40ba0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xce68>\n+\tb.n\t40bb0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xce78>\n \tmovs\tr3, r7\n-\tcbz\tr2, 403da , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6a2>\n+\tcbz\tr6, 403dc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6a4>\n \tmovs\tr2, r7\n-\tcbz\tr0, 403d8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6a0>\n+\tcbz\tr4, 403da , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6a2>\n \tmovs\tr2, r7\n \tmovs\tr0, #24\n \tlsls\tr7, r0, #1\n-\tudf\t#100\t@ 0x64\n+\tudf\t#112\t@ 0x70\n \tmovs\tr2, r7\n \t\t\t@ instruction: 0xe9a60046\n-\tudf\t#32\n+\tudf\t#44\t@ 0x2c\n \tmovs\tr2, r7\n-\tsub\tsp, #216\t@ 0xd8\n+\tsub\tsp, #264\t@ 0x108\n \tmovs\tr2, r7\n \tsubs\tr6, r6, #5\n \tlsls\tr7, r0, #1\n-\tble.n\t40370 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc638>\n+\tble.n\t40388 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc650>\n \tmovs\tr2, r7\n \tstmdb\tr2, {r1, r2, r6}\n-\tble.n\t402f0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc5b8>\n+\tble.n\t40308 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc5d0>\n \tmovs\tr2, r7\n-\tble.n\t404ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc774>\n+\tble.n\t404c4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc78c>\n \tmovs\tr2, r7\n \tsubs\tr0, r2, #3\n \tlsls\tr7, r0, #1\n-\tble.n\t40470 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc738>\n+\tble.n\t40488 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc750>\n \tmovs\tr2, r7\n \t\t\t@ instruction: 0xe8580046\n-\tbgt.n\t403e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6b0>\n+\tble.n\t40400 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6c8>\n \tmovs\tr2, r7\n-\tadd\tr7, sp, #528\t@ 0x210\n+\tadd\tr7, sp, #576\t@ 0x240\n \tmovs\tr2, r7\n-\tbgt.n\t40360 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc628>\n+\tbgt.n\t40378 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc640>\n \tmovs\tr2, r7\n \tsubs\tr6, r2, #0\n \tlsls\tr7, r0, #1\n-\tble.n\t40434 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6fc>\n+\tble.n\t4044c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc714>\n \tmovs\tr2, r7\n \tb.n\t4034c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc614>\n \tlsls\tr6, r0, #1\n-\tbgt.n\t403ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc674>\n+\tbgt.n\t403c4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc68c>\n \tmovs\tr2, r7\n-\tbgt.n\t40448 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc710>\n+\tbgt.n\t40460 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc728>\n \tmovs\tr2, r7\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tbgt.n\t40430 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6f8>\n+\tbgt.n\t40448 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc710>\n \tmovs\tr2, r7\n-\tblt.n\t40418 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6e0>\n+\tbgt.n\t40430 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6f8>\n \tmovs\tr2, r7\n-\tb.n\t40584 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc84c>\n+\tb.n\t40594 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc85c>\n \tmovs\tr3, r7\n-\tb.n\t4057c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc844>\n+\tb.n\t4058c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc854>\n \tmovs\tr3, r7\n \tadds\tr4, r0, #4\n \tlsls\tr7, r0, #1\n \tadds\tr0, r5, #3\n \tlsls\tr7, r0, #1\n \tadds\tr0, r3, #3\n \tlsls\tr7, r0, #1\n \tadds\tr2, r0, #1\n \tlsls\tr7, r0, #1\n \tb.n\t40068 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc330>\n \tlsls\tr6, r0, #1\n-\tadd\tr3, pc, #528\t@ (adr r3, 40650 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc918>)\n+\tadd\tr3, pc, #560\t@ (adr r3, 40670 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc938>)\n \tmovs\tr5, r7\n \tsubs\tr6, r7, r5\n \tlsls\tr7, r0, #1\n-\tadd\tr2, pc, #960\t@ (adr r2, 40808 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcad0>)\n+\tadd\tr2, pc, #992\t@ (adr r2, 40828 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcaf0>)\n \tmovs\tr5, r7\n \tsubs\tr2, r0, r3\n \tlsls\tr7, r0, #1\n \tsubs\tr2, r0, r2\n \tlsls\tr7, r0, #1\n \tsubs\tr6, r0, r1\n \tlsls\tr7, r0, #1\n \tb.n\t3fc8c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xbf54>\n \tlsls\tr6, r0, #1\n-\tcbz\tr6, 4046c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc734>\n+\tcbz\tr2, 40470 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc738>\n \tmovs\tr2, r7\n-\tsub\tsp, #40\t@ 0x28\n+\tsub\tsp, #88\t@ 0x58\n \tmovs\tr2, r7\n-\tbvc.n\t404b0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc778>\n+\tbvc.n\t404c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc790>\n \tmovs\tr2, r7\n-\tbvs.n\t40560 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc828>\n+\tbvs.n\t40378 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc640>\n \tmovs\tr2, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbvs.n\t40400 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6c8>\n+\tbvs.n\t40418 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc6e0>\n \tmovs\tr2, r7\n-\tbvs.n\t404b0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc778>\n+\tbvs.n\t404c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xc790>\n \tmovs\tr2, r7\n ConvPro::putReadsInContigsAndSave(std::vector >&, ReadPool&):\n ./src/modules/mod_convert.C:666\n \tldr.w\tr2, [pc, #1516]\t@ 40a68 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcd30>\n \tldr.w\tr3, [pc, #1516]\t@ 40a6c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcd34>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -109138,29 +109139,29 @@\n \tlsls\tr7, r0, #1\n \tasrs\tr6, r0, #22\n \tlsls\tr7, r0, #1\n \tasrs\tr2, r0, #22\n \tlsls\tr7, r0, #1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbcc.n\t409b8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcc80>\n+\tbcc.n\t409d0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcc98>\n \tmovs\tr2, r7\n \tasrs\tr4, r7, #16\n \tlsls\tr7, r0, #1\n \tasrs\tr2, r1, #16\n \tlsls\tr7, r0, #1\n \tldmia\tr0!, {r1, r2, r3, r4, r5, r6, r7}\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrh\tr4, [r1, #46]\t@ 0x2e\n+\tldrh\tr0, [r3, #46]\t@ 0x2e\n \tmovs\tr2, r7\n-\tldrh\tr0, [r1, #46]\t@ 0x2e\n+\tldrh\tr4, [r2, #46]\t@ 0x2e\n \tmovs\tr2, r7\n-\tadd\tr4, pc, #32\t@ (adr r4, 40ac4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcd8c>)\n+\tadd\tr4, pc, #64\t@ (adr r4, 40ae4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xcdac>)\n \tmovs\tr4, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -109170,23 +109171,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r2, #36]\t@ 0x24\n+\tldrh\tr0, [r4, #36]\t@ 0x24\n \tmovs\tr2, r7\n-\tldrh\tr0, [r2, #36]\t@ 0x24\n+\tldrh\tr4, [r3, #36]\t@ 0x24\n \tmovs\tr2, r7\n-\tadd\tr2, pc, #832\t@ (adr r2, 40e10 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd0d8>)\n+\tadd\tr2, pc, #864\t@ (adr r2, 40e30 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd0f8>)\n \tmovs\tr4, r7\n-\tstr\tr6, [r2, #36]\t@ 0x24\n+\tstr\tr2, [r4, #36]\t@ 0x24\n \tmovs\tr2, r7\n-\tstr\tr4, [r2, #36]\t@ 0x24\n+\tstr\tr0, [r4, #36]\t@ 0x24\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr6, sp, #320\t@ 0x140\n@@ -109501,27 +109502,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r2, #12]\n+\tldrh\tr6, [r3, #12]\n \tmovs\tr2, r7\n-\tldrh\tr6, [r0, #12]\n+\tldrh\tr2, [r2, #12]\n \tmovs\tr2, r7\n-\tcbz\tr4, 40d7c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd044>\n+\tcbz\tr4, 40d7e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd046>\n \tmovs\tr4, r7\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr6, [r2, #27]\n+\tldrb\tr2, [r4, #27]\n \tmovs\tr2, r7\n \tstr\tr2, [r1, r7]\n \tmovs\tr2, r7\n ConvPro::saveContigList(std::__cxx11::list >&, ReadPool&):\n ./src/modules/mod_convert.C:1179\n \tldr\tr2, [pc, #828]\t@ (410bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd384>)\n \tldr\tr3, [pc, #832]\t@ (410c0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd388>)\n@@ -109997,15 +109998,15 @@\n \tlsls\tr7, r0, #1\n \tstmia\tr0!, {r1, r2}\n \tlsls\tr6, r0, #1\n \tbmi.n\t41194 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd45c>\n \tlsls\tr6, r0, #1\n \tldr\tr5, [pc, #688]\t@ (413a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd668>)\n \tmovs\tr2, r7\n-\tldmia\tr0!, {r1, r4, r5, r6, r7}\n+\tldmia\tr0!, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr2, r7\n ConvPro::sortPoolByName(ReadPool&, std::__cxx11::basic_string, std::allocator >&):\n ./src/modules/mod_convert.C:727\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr\tr4, [pc, #932]\t@ (414a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd768>)\n \tldr\tr2, [pc, #932]\t@ (414a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd76c>)\n@@ -110504,23 +110505,23 @@\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbkpt\t0x0056\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r1, r5, r7}\n+\tldmia\tr0!, {r1, r2, r3, r5, r7}\n \tmovs\tr2, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tstrh\tr2, [r0, #22]\n+\tstrh\tr6, [r1, #22]\n \tmovs\tr2, r7\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tcbnz\tr6, 41544 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xd80c>\n \tlsls\tr6, r0, #1\n@@ -111001,77 +111002,77 @@\n \tlsls\tr7, r0, #1\n \trev16\tr4, r3\n \tlsls\tr6, r0, #1\n \tlsls\tr2, r5, #20\n \tlsls\tr7, r0, #1\n \trev\tr6, r5\n \tlsls\tr6, r0, #1\n-\tstr\tr6, [sp, #200]\t@ 0xc8\n+\tstr\tr6, [sp, #248]\t@ 0xf8\n \tmovs\tr2, r7\n-\tstmia\tr4!, {r1, r3, r5, r6}\n+\tstmia\tr4!, {r1, r2, r4, r5, r6}\n \tmovs\tr2, r7\n-\tstmia\tr4!, {r2, r5, r6}\n+\tstmia\tr4!, {r4, r5, r6}\n \tmovs\tr2, r7\n-\tldrh\tr2, [r2, r6]\n+\tldrh\tr2, [r3, r6]\n \tmovs\tr4, r7\n-\tstmia\tr4!, {r2, r4, r6}\n+\tstmia\tr4!, {r5, r6}\n \tmovs\tr2, r7\n-\tstmia\tr1!, {r1, r2, r3, r4, r5, r6, r7}\n+\tstmia\tr2!, {r1, r3}\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #768]\t@ 0x300\n+\tstr\tr5, [sp, #816]\t@ 0x330\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #760]\t@ 0x2f8\n+\tstr\tr5, [sp, #808]\t@ 0x328\n \tmovs\tr2, r7\n-\tstmia\tr1!, {r2, r3, r4, r5, r6, r7}\n+\tstmia\tr2!, {r3}\n \tmovs\tr2, r7\n-\tstmia\tr1!, {r1, r2, r4, r5, r6, r7}\n+\tstmia\tr2!, {r1}\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #704]\t@ 0x2c0\n+\tstr\tr5, [sp, #752]\t@ 0x2f0\n \tmovs\tr2, r7\n-\tldrb\tr2, [r1, #25]\n+\tldrb\tr6, [r2, #25]\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #784]\t@ 0x310\n+\tstr\tr5, [sp, #832]\t@ 0x340\n \tmovs\tr2, r7\n-\tldrb\tr2, [r4, #24]\n+\tldrb\tr6, [r5, #24]\n \tmovs\tr2, r7\n-\tldrb\tr0, [r4, #24]\n+\tldrb\tr4, [r5, #24]\n \tmovs\tr2, r7\n-\tldrb\tr2, [r2, #24]\n+\tldrb\tr6, [r3, #24]\n \tmovs\tr2, r7\n-\tldrb\tr0, [r0, #24]\n+\tldrb\tr4, [r1, #24]\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #456]\t@ 0x1c8\n+\tstr\tr5, [sp, #504]\t@ 0x1f8\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #352]\t@ 0x160\n+\tstr\tr5, [sp, #400]\t@ 0x190\n \tmovs\tr2, r7\n-\tstmia\tr2!, {r1, r2, r7}\n+\tstmia\tr2!, {r1, r4, r7}\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #176]\t@ 0xb0\n+\tstr\tr5, [sp, #224]\t@ 0xe0\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #88]\t@ 0x58\n+\tstr\tr5, [sp, #136]\t@ 0x88\n \tmovs\tr2, r7\n-\tstmia\tr2!, {r7}\n+\tstmia\tr2!, {r2, r3, r7}\n \tmovs\tr2, r7\n-\tstr\tr5, [sp, #264]\t@ 0x108\n+\tstr\tr5, [sp, #312]\t@ 0x138\n \tmovs\tr2, r7\n-\tstmia\tr2!, {r2, r4, r5, r6}\n+\tstmia\tr2!, {r7}\n \tmovs\tr2, r7\n-\tstmia\tr2!, {r1, r2, r3, r4, r5, r6}\n+\tstmia\tr2!, {r1, r3, r7}\n \tmovs\tr2, r7\n-\tstmia\tr2!, {r2, r4}\n+\tstmia\tr2!, {r5}\n \tmovs\tr2, r7\n-\tstmia\tr2!, {r1, r4}\n+\tstmia\tr2!, {r1, r2, r3, r4}\n \tmovs\tr2, r7\n-\tstmia\tr1!, {r5, r6, r7}\n+\tstmia\tr1!, {r2, r3, r5, r6, r7}\n \tmovs\tr2, r7\n-\tstmia\tr1!, {r1, r2, r5, r6, r7}\n+\tstmia\tr1!, {r1, r4, r5, r6, r7}\n \tmovs\tr2, r7\n-\tstmia\tr1!, {r2, r5, r6, r7}\n+\tstmia\tr1!, {r4, r5, r6, r7}\n \tmovs\tr2, r7\n-\tldmia\tr5!, {r1, r7}\n+\tldmia\tr5!, {r1, r3, r7}\n \tmovs\tr7, r7\n \tlsls\tr0, r3, #14\n \tlsls\tr7, r0, #1\n \tlsls\tr6, r1, #14\n \tlsls\tr7, r0, #1\n \tlsls\tr6, r0, #14\n \tlsls\tr7, r0, #1\n@@ -111503,17 +111504,17 @@\n \tb.n\t41baa , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xde72>\n \t\t\t@ instruction: 0xb620\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tpush\t{r1, r2, r3, lr}\n \tlsls\tr6, r0, #1\n-\tstr\tr0, [sp, #840]\t@ 0x348\n+\tstr\tr0, [sp, #888]\t@ 0x378\n \tmovs\tr2, r7\n-\tstr\tr0, [sp, #280]\t@ 0x118\n+\tstr\tr0, [sp, #328]\t@ 0x148\n \tmovs\tr2, r7\n ConvPro::checkForFromType(std::__cxx11::basic_string, std::allocator > const&):\n ./src/modules/mod_convert.C:357\n \tldr\tr1, [pc, #736]\t@ (41eb4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xe17c>)\n \tldr\tr2, [pc, #740]\t@ (41eb8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xe180>)\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -111902,39 +111903,39 @@\n \tmovs\tr0, r0\n \tcdp2\t0, 6, cr0, cr0, cr6, {2}\n \tcbz\tr6, 41f1e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xe1e6>\n \tlsls\tr6, r0, #1\n \tcdp2\t0, 3, cr0, cr12, cr6, {2}\n \tcbz\tr6, 41f1c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xe1e4>\n \tlsls\tr6, r0, #1\n-\tldrh\tr0, [r2, #56]\t@ 0x38\n+\tldrh\tr4, [r3, #56]\t@ 0x38\n \tmovs\tr2, r7\n-\tldrh\tr4, [r1, #56]\t@ 0x38\n+\tldrh\tr0, [r3, #56]\t@ 0x38\n \tmovs\tr2, r7\n-\tstrb\tr2, [r6, #30]\n+\tstrb\tr6, [r7, #30]\n \tmovs\tr2, r7\n-\tstrb\tr0, [r3, #30]\n+\tstrb\tr4, [r4, #30]\n \tmovs\tr2, r7\n-\tstrb\tr6, [r2, #30]\n+\tstrb\tr2, [r4, #30]\n \tmovs\tr2, r7\n-\tstrb\tr0, [r1, #30]\n+\tstrb\tr4, [r2, #30]\n \tmovs\tr2, r7\n-\tstrb\tr6, [r6, #29]\n+\tstrb\tr2, [r0, #30]\n \tmovs\tr2, r7\n-\tldrh\tr0, [r7, #54]\t@ 0x36\n+\tldrh\tr4, [r0, #56]\t@ 0x38\n \tmovs\tr2, r7\n-\tpop\t{r1, r3, r4, pc}\n+\tpop\t{r1, r2, r5, pc}\n \tmovs\tr2, r7\n-\tpop\t{r2, r4, pc}\n+\tpop\t{r5, pc}\n \tmovs\tr2, r7\n-\tstrb\tr2, [r0, r1]\n+\tstrb\tr2, [r1, r1]\n \tmovs\tr4, r7\n-\tpop\t{r2, pc}\n+\tpop\t{r4, pc}\n \tmovs\tr2, r7\n-\tpop\t{r1, r2, r3, r4, r5, r6, r7}\n+\tpop\t{r1, r3, pc}\n \tmovs\tr2, r7\n \tstc2l\t0, cr0, [ip, #-280]\t@ 0xfffffee8\n \tstc2l\t0, cr0, [r6, #-280]\t@ 0xfffffee8\n \tldc2\t0, cr0, [sl, #-280]!\t@ 0xfffffee8\n \tldc2\t0, cr0, [r4, #-280]!\t@ 0xfffffee8\n \tstc2\t0, cr0, [r2, #-280]!\t@ 0xfffffee8\n \tstc2\t0, cr0, [r0, #-280]\t@ 0xfffffee8\n@@ -112076,21 +112077,21 @@\n \t\t\t@ instruction: 0xfafa0046\n \t\t\t@ instruction: 0xfaf00046\n \t\t\t@ instruction: 0xfabc0046\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\trev16\tr2, r7\n+\thlt\t0x0006\n \tmovs\tr2, r7\n-\thlt\t0x0016\n+\thlt\t0x0022\n \tmovs\tr2, r7\n-\trev\tr4, r0\n+\trev\tr0, r2\n \tmovs\tr2, r7\n-\trev\tr2, r2\n+\trev\tr6, r3\n \tmovs\tr2, r7\n ConvPro::filterToReadGroup(ReadPool&):\n ./src/modules/mod_convert.C:475\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr4, [pc, #3180]\t@ 42cb4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xef7c>\n \tsub.w\tsp, sp, #684\t@ 0x2ac\n \tldr.w\tr2, [pc, #3176]\t@ 42cb8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xef80>\n@@ -113729,24 +113730,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tudf\t#38\t@ 0x26\n+\tudf\t#46\t@ 0x2e\n \tmovs\tr3, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcbz\tr2, 42d10 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xefd8>\n+\tcbz\tr6, 42d12 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xefda>\n \tmovs\tr2, r7\n-\tcbz\tr2, 42d12 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xefda>\n+\tcbz\tr6, 42d14 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xefdc>\n \tmovs\tr2, r7\n \tadc.w\tr0, r6, #70\t@ 0x46\n-\tstr\tr0, [r3, r7]\n+\tstr\tr0, [r4, r7]\n \tmovs\tr3, r7\n /usr/include/c++/10/bits/basic_ios.h:460\n \tadd.w\tr6, fp, #140\t@ 0x8c\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, r6\n \tblx\tbcc4 \n \tstrb.w\tr5, [fp, #256]\t@ 0x100\n@@ -115394,37 +115395,37 @@\n \tmovs\tr0, #255\t@ 0xff\n /usr/include/boost/lexical_cast/detail/lcast_unsigned_converters.hpp:127\n \tadd.w\tlr, r4, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/char_traits.h:329\n \tstrb.w\tr9, [r4, #-1]\n \tb.n\t4381e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xfae6>\n \tldc\t0, cr0, [lr], {70}\t@ 0x46\n-\tadd\tr4, sp, #160\t@ 0xa0\n+\tadd\tr4, sp, #208\t@ 0xd0\n \tmovs\tr2, r7\n-\tadd\tr3, sp, #488\t@ 0x1e8\n+\tadd\tr3, sp, #536\t@ 0x218\n \tmovs\tr2, r7\n-\tadd\tr2, sp, #1016\t@ 0x3f8\n+\tadd\tr3, sp, #40\t@ 0x28\n \tmovs\tr2, r7\n-\tadd\tr2, sp, #576\t@ 0x240\n+\tadd\tr2, sp, #624\t@ 0x270\n \tmovs\tr2, r7\n-\tadd\tr1, sp, #984\t@ 0x3d8\n+\tadd\tr2, sp, #8\n \tmovs\tr2, r7\n \tb.n\t43628 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xf8f0>\n \tlsls\tr6, r0, #1\n \tb.n\t4363c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xf904>\n \tlsls\tr6, r0, #1\n \tb.n\t4363c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xf904>\n \tlsls\tr6, r0, #1\n \tb.n\t43630 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0xf8f8>\n \tlsls\tr6, r0, #1\n-\tstr\tr6, [r7, #12]\n+\tstr\tr2, [r1, #16]\n \tmovs\tr2, r7\n-\tstr\tr0, [r7, #12]\n+\tstr\tr4, [r0, #16]\n \tmovs\tr2, r7\n-\tstrb\tr4, [r6, #28]\n+\tstrb\tr4, [r7, #28]\n \tmovs\tr4, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -116857,45 +116858,45 @@\n \tlsls\tr6, r0, #1\n \tstr\tr4, [sp, #88]\t@ 0x58\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #26\n \tmovs\tr0, r0\n-\tldrsb\tr0, [r6, r0]\n+\tldrsb\tr4, [r7, r0]\n \tmovs\tr2, r7\n \tsubs\tr6, r2, #3\n \tmovs\tr2, r7\n \tsubs\tr4, r1, #3\n \tmovs\tr2, r7\n-\tldr\tr3, [pc, #768]\t@ (4466c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10934>)\n+\tldr\tr3, [pc, #816]\t@ (4469c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10964>)\n \tmovs\tr2, r7\n \tsubs\tr2, r6, #2\n \tmovs\tr2, r7\n-\tldr\tr3, [pc, #688]\t@ (44624 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x108ec>)\n+\tldr\tr3, [pc, #736]\t@ (44654 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1091c>)\n \tmovs\tr2, r7\n \tsubs\tr6, r3, #2\n \tmovs\tr2, r7\n-\tldr\tr3, [pc, #592]\t@ (445cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10894>)\n+\tldr\tr3, [pc, #640]\t@ (445fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x108c4>)\n \tmovs\tr2, r7\n-\tldr\tr3, [pc, #552]\t@ (445a8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10870>)\n+\tldr\tr3, [pc, #600]\t@ (445d8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x108a0>)\n \tmovs\tr2, r7\n-\tldr\tr3, [pc, #520]\t@ (4458c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10854>)\n+\tldr\tr3, [pc, #568]\t@ (445bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10884>)\n \tmovs\tr2, r7\n-\tldr\tr3, [pc, #488]\t@ (44570 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10838>)\n+\tldr\tr3, [pc, #536]\t@ (445a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x10868>)\n \tmovs\tr2, r7\n-\tcmp\tr4, #174\t@ 0xae\n+\tcmp\tr4, #186\t@ 0xba\n \tmovs\tr2, r7\n-\tcmp\tr4, #166\t@ 0xa6\n+\tcmp\tr4, #178\t@ 0xb2\n \tmovs\tr2, r7\n-\tcmp\tr4, #158\t@ 0x9e\n+\tcmp\tr4, #170\t@ 0xaa\n \tmovs\tr2, r7\n-\tcmp\tr4, #150\t@ 0x96\n+\tcmp\tr4, #162\t@ 0xa2\n \tmovs\tr2, r7\n-\tcmp\tr4, #142\t@ 0x8e\n+\tcmp\tr4, #154\t@ 0x9a\n \tmovs\tr2, r7\n ConvPro::saveReadPool(ReadPool&, std::__cxx11::list >*, std::allocator >*> >&):\n ./src/modules/mod_convert.C:1263\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr3, r1\n \tldr.w\tr2, [pc, #3140]\t@ 44fe8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x112b0>\n \tvpush\t{d8}\n@@ -118635,55 +118636,55 @@\n \tlsls\tr6, r0, #1\n \tbcc.n\t45018 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x112e0>\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tbcs.n\t44fb8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x11280>\n \tlsls\tr6, r0, #1\n-\tadds\tr3, #178\t@ 0xb2\n+\tadds\tr3, #186\t@ 0xba\n \tmovs\tr3, r7\n \tldr\tr3, [sp, #992]\t@ 0x3e0\n \tlsls\tr6, r0, #1\n \tldmia\tr7, {r1, r4, r5, r6, r7}\n \tlsls\tr6, r0, #1\n \tldmia\tr7, {r2, r4, r6, r7}\n \tlsls\tr6, r0, #1\n \tldmia\tr7, {r1, r4, r6, r7}\n \tlsls\tr6, r0, #1\n \tldmia\tr6, {r2, r6, r7}\n \tlsls\tr6, r0, #1\n \tldmia\tr6, {r3, r5, r6}\n \tlsls\tr6, r0, #1\n-\tldrsh\tr4, [r6, r5]\n+\tldrsh\tr0, [r0, r6]\n \tmovs\tr2, r7\n \tldmia\tr6!, {r1, r4, r5}\n \tlsls\tr6, r0, #1\n \tldmia\tr6!, {r4, r5}\n \tlsls\tr6, r0, #1\n \tldmia\tr6!, {r3, r5}\n \tlsls\tr6, r0, #1\n-\tldrsh\tr4, [r4, r2]\n+\tldrsh\tr0, [r6, r2]\n \tmovs\tr2, r7\n \tstrh\tr0, [r1, #18]\n \tlsls\tr6, r0, #1\n \tldmia\tr5!, {r1, r3}\n \tlsls\tr6, r0, #1\n-\tldrh\tr4, [r4, #16]\n+\tldrh\tr0, [r6, #16]\n \tmovs\tr2, r7\n-\tldrh\tr4, [r7, #14]\n+\tldrh\tr0, [r1, #16]\n \tmovs\tr2, r7\n-\tldrh\tr6, [r5, #14]\n+\tldrh\tr2, [r7, #14]\n \tmovs\tr2, r7\n \tstrh\tr6, [r6, #2]\n \tlsls\tr6, r0, #1\n-\tmovs\tr2, #0\n+\tmovs\tr2, #8\n \tmovs\tr4, r7\n-\tldrb\tr4, [r7, r0]\n+\tldrb\tr0, [r1, r1]\n \tmovs\tr2, r7\n-\tadd\tip, sp\n+\tadd\tr8, pc\n \tmovs\tr2, r7\n \tldmia\tr2, {r2, r3, r5, r6}\n \tlsls\tr6, r0, #1\n ./src/modules/mod_convert.C:1380 (discriminator 2)\n \tadd\tr4, sp, #192\t@ 0xc0\n \tmov\tr0, r4\n \tbl\t3dc84 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x9f4c>\n@@ -119812,107 +119813,107 @@\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t458aa , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x11b72>\n \tb.n\t45900 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x11bc8>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t457c6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x11a8e>\n \tb.n\t457ce , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x11a96>\n \tnop\n-\tldrh\tr0, [r0, #24]\n+\tldrh\tr4, [r1, #24]\n \tmovs\tr2, r7\n-\tldrh\tr0, [r4, #18]\n+\tldrh\tr4, [r5, #18]\n \tmovs\tr2, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr6, [r7, #16]\n+\tldrh\tr2, [r1, #18]\n \tmovs\tr2, r7\n \tldrb\tr0, [r3, #23]\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\torrs\tr0, r3\n+\torrs\tr4, r4\n \tmovs\tr2, r7\n-\torrs\tr2, r2\n+\torrs\tr6, r3\n \tmovs\tr2, r7\n-\tldr\tr0, [r2, r5]\n+\tldr\tr0, [r3, r5]\n \tmovs\tr4, r7\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\ttst\tr4, r0\n+\ttst\tr0, r2\n \tmovs\tr2, r7\n-\trors\tr6, r6\n+\ttst\tr2, r0\n \tmovs\tr2, r7\n-\tldr\tr4, [r0, #28]\n+\tldr\tr4, [r1, #28]\n \tmovs\tr4, r7\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tasrs\tr6, r5\n+\tasrs\tr2, r7\n \tmovs\tr2, r7\n-\tasrs\tr0, r5\n+\tasrs\tr4, r6\n \tmovs\tr2, r7\n-\tldrsb\tr6, [r4, r5]\n+\tldrsb\tr6, [r5, r5]\n \tmovs\tr4, r7\n-\tlsls\tr0, r1\n+\tlsls\tr4, r2\n \tmovs\tr2, r7\n-\tlsls\tr2, r0\n+\tlsls\tr6, r1\n \tmovs\tr2, r7\n-\tldrsb\tr0, [r0, r3]\n+\tldrsb\tr0, [r1, r3]\n \tmovs\tr4, r7\n-\tstrh\tr2, [r4, #50]\t@ 0x32\n+\tstrh\tr6, [r5, #50]\t@ 0x32\n \tmovs\tr2, r7\n-\tldrsb\tr2, [r6, r0]\n+\tldrsb\tr6, [r7, r0]\n \tmovs\tr2, r7\n-\tldrsb\tr6, [r5, r0]\n+\tldrsb\tr2, [r7, r0]\n \tmovs\tr2, r7\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstrh\tr2, [r4, #40]\t@ 0x28\n+\tstrh\tr6, [r5, #40]\t@ 0x28\n \tmovs\tr2, r7\n \tstmia\tr4!, {r1, r2, r3, r6}\n \tlsls\tr6, r0, #1\n-\tstrh\tr6, [r2, #40]\t@ 0x28\n+\tstrh\tr2, [r4, #40]\t@ 0x28\n \tmovs\tr2, r7\n-\tstrh\tr4, [r7, #38]\t@ 0x26\n+\tstrh\tr0, [r1, #40]\t@ 0x28\n \tmovs\tr2, r7\n-\tadds\tr4, #168\t@ 0xa8\n+\tadds\tr4, #180\t@ 0xb4\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrh\tr2, [r6, #18]\n+\tstrh\tr6, [r7, #18]\n \tmovs\tr2, r7\n-\tstrh\tr4, [r6, #40]\t@ 0x28\n+\tstrh\tr0, [r0, #42]\t@ 0x2a\n \tmovs\tr2, r7\n-\tasrs\tr2, r5, #22\n+\tasrs\tr6, r6, #22\n \tmovs\tr2, r7\n \tlsls\tr2, r4, #29\n \tmovs\tr2, r7\n-\tadds\tr4, #94\t@ 0x5e\n+\tadds\tr4, #106\t@ 0x6a\n \tmovs\tr2, r7\n-\tadds\tr4, #86\t@ 0x56\n+\tadds\tr4, #98\t@ 0x62\n \tmovs\tr2, r7\n-\tstrh\tr6, [r7, #36]\t@ 0x24\n+\tstrh\tr2, [r1, #38]\t@ 0x26\n \tmovs\tr2, r7\n-\tstrh\tr2, [r2, #36]\t@ 0x24\n+\tstrh\tr6, [r3, #36]\t@ 0x24\n \tmovs\tr2, r7\n-\tstr\tr2, [r2, #96]\t@ 0x60\n+\tstr\tr2, [r3, #96]\t@ 0x60\n \tmovs\tr4, r7\n-\tstrh\tr0, [r6, #30]\n+\tstrh\tr4, [r7, #30]\n \tmovs\tr2, r7\n ConvPro::cafmafload_callback(std::__cxx11::list >&, ReadPool&):\n ./src/modules/mod_convert.C:1485\n \tldr\tr2, [pc, #764]\t@ (45ccc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x11f94>)\n \tldr\tr3, [pc, #768]\t@ (45cd0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x11f98>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -120353,17 +120354,17 @@\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tstrb\tr6, [r1, #16]\n \tlsls\tr6, r0, #1\n \tbkpt\t0x0080\n \tlsls\tr6, r0, #1\n-\tldrb\tr6, [r0, #31]\n+\tldrb\tr2, [r2, #31]\n \tmovs\tr2, r7\n-\tldrb\tr4, [r7, #30]\n+\tldrb\tr0, [r1, #31]\n \tmovs\tr2, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ConvPro::readpoolload_callback(ReadPool&):\n ./src/modules/mod_convert.C:1517\n@@ -122110,15 +122111,15 @@\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr2, [r7, #3]\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r4, #31\n \tmovs\tr0, r0\n-\tstrh\tr0, [r6, #40]\t@ 0x28\n+\tstrh\tr4, [r7, #40]\t@ 0x28\n \tmovs\tr2, r7\n \tcbnz\tr4, 46a6c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12d34>\n \tlsls\tr6, r0, #1\n \tcbnz\tr4, 46a66 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12d2e>\n \tlsls\tr6, r0, #1\n \tcbnz\tr6, 46a66 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12d2e>\n \tlsls\tr6, r0, #1\n@@ -122128,27 +122129,27 @@\n \tmovs\tr0, r0\n \thlt\t0x0006\n \tlsls\tr6, r0, #1\n \trev16\tr2, r3\n \tlsls\tr6, r0, #1\n \trev\tr6, r6\n \tlsls\tr6, r0, #1\n-\tldrb\tr0, [r3, #23]\n+\tldrb\tr4, [r4, #23]\n \tmovs\tr2, r7\n \tstrh\tr2, [r5, #30]\n \tlsls\tr6, r0, #1\n \trev\tr2, r0\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r6, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrb\tr4, [r4, #16]\n+\tldrb\tr0, [r6, #16]\n \tmovs\tr2, r7\n \tstrh\tr4, [r3, #26]\n \tlsls\tr6, r0, #1\n \tcbnz\tr6, 46a54 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12d1c>\n \tlsls\tr6, r0, #1\n \tcbnz\tr4, 46a52 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12d1a>\n \tlsls\tr6, r0, #1\n@@ -122180,15 +122181,15 @@\n \tlsls\tr6, r0, #1\n \t\t\t@ instruction: 0xb6a0\n \tlsls\tr6, r0, #1\n \t\t\t@ instruction: 0xb66a\n \tlsls\tr6, r0, #1\n \t\t\t@ instruction: 0xb63e\n \tlsls\tr6, r0, #1\n-\tldrb\tr6, [r6, #2]\n+\tldrb\tr2, [r0, #3]\n \tmovs\tr2, r7\n \tpush\t{r1, r4, r6, r7, lr}\n \tlsls\tr6, r0, #1\n \tpush\t{r1, r3, r5, r7, lr}\n \tlsls\tr6, r0, #1\n \tpush\t{r3, r4, r7, lr}\n \tlsls\tr6, r0, #1\n@@ -122200,41 +122201,41 @@\n \tlsls\tr6, r0, #1\n \tldrb\tr0, [r6, #28]\n \tlsls\tr6, r0, #1\n \tpush\t{r1, r2, r5, lr}\n \tlsls\tr6, r0, #1\n \tpush\t{r1, r3, r5, r7}\n \tlsls\tr6, r0, #1\n-\tcmp\tr6, #100\t@ 0x64\n+\tcmp\tr6, #112\t@ 0x70\n \tmovs\tr2, r7\n-\tcmp\tr6, #92\t@ 0x5c\n+\tcmp\tr6, #104\t@ 0x68\n \tmovs\tr2, r7\n \tpush\t{r2, r3, r4, r5, r6}\n \tlsls\tr6, r0, #1\n-\tcmp\tr6, #60\t@ 0x3c\n+\tcmp\tr6, #72\t@ 0x48\n \tmovs\tr2, r7\n \tpush\t{r1, r2, r5, r6}\n \tlsls\tr6, r0, #1\n \tpush\t{r2, r4, r6}\n \tlsls\tr6, r0, #1\n+\tcmp\tr6, #28\n+\tmovs\tr2, r7\n \tcmp\tr6, #16\n \tmovs\tr2, r7\n-\tcmp\tr6, #4\n+\tcmp\tr5, #240\t@ 0xf0\n \tmovs\tr2, r7\n \tcmp\tr5, #228\t@ 0xe4\n \tmovs\tr2, r7\n-\tcmp\tr5, #216\t@ 0xd8\n-\tmovs\tr2, r7\n-\tstrb\tr0, [r3, #14]\n+\tstrb\tr4, [r4, #14]\n \tmovs\tr2, r7\n-\tstrb\tr2, [r0, #14]\n+\tstrb\tr6, [r1, #14]\n \tmovs\tr2, r7\n-\tstrb\tr0, [r6, #13]\n+\tstrb\tr4, [r7, #13]\n \tmovs\tr2, r7\n-\tcmp\tr4, r3\n+\tcmp\tr0, r5\n \tmovs\tr2, r7\n \tcbz\tr6, 46b48 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e10>\n \tlsls\tr6, r0, #1\n \tcbz\tr2, 46b44 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e0c>\n \tlsls\tr6, r0, #1\n \tcbz\tr4, 46b38 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e00>\n \tlsls\tr6, r0, #1\n@@ -122242,21 +122243,21 @@\n \tlsls\tr6, r0, #1\n \tuxth\tr2, r4\n \tlsls\tr6, r0, #1\n \tuxth\tr4, r3\n \tlsls\tr6, r0, #1\n \tuxth\tr6, r1\n \tlsls\tr6, r0, #1\n-\tldr\tr2, [r7, #124]\t@ 0x7c\n+\tstrb\tr6, [r0, #0]\n \tmovs\tr2, r7\n \tsxtb\tr6, r5\n \tlsls\tr6, r0, #1\n \tsxtb\tr6, r3\n \tlsls\tr6, r0, #1\n-\tldr\tr6, [r0, #124]\t@ 0x7c\n+\tldr\tr2, [r2, #124]\t@ 0x7c\n \tmovs\tr2, r7\n \tsxth\tr2, r7\n \tlsls\tr6, r0, #1\n \tsxth\tr6, r5\n \tlsls\tr6, r0, #1\n \tsxth\tr4, r5\n \tlsls\tr6, r0, #1\n@@ -122264,47 +122265,47 @@\n \tlsls\tr6, r0, #1\n \tcbz\tr2, 46b5e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e26>\n \tlsls\tr6, r0, #1\n \tcbz\tr0, 46b52 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e1a>\n \tlsls\tr6, r0, #1\n \tcbz\tr4, 46b50 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e18>\n \tlsls\tr6, r0, #1\n-\tmovs\tr7, #202\t@ 0xca\n+\tmovs\tr7, #214\t@ 0xd6\n \tmovs\tr2, r7\n \tcbz\tr4, 46b4a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e12>\n \tlsls\tr6, r0, #1\n-\tmovs\tr7, #182\t@ 0xb6\n+\tmovs\tr7, #194\t@ 0xc2\n \tmovs\tr2, r7\n \tcbz\tr0, 46b4a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e12>\n \tlsls\tr6, r0, #1\n \tlsls\tr0, r6, #22\n \tmovs\tr0, r0\n \tldrb\tr4, [r4, #11]\n \tlsls\tr6, r0, #1\n \tcbz\tr2, 46b46 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x12e0e>\n \tlsls\tr6, r0, #1\n \tsub\tsp, #424\t@ 0x1a8\n \tlsls\tr6, r0, #1\n \tsub\tsp, #360\t@ 0x168\n \tlsls\tr6, r0, #1\n-\tstrb\tr2, [r4, #18]\n+\tstrb\tr6, [r5, #18]\n \tmovs\tr2, r7\n \tsub\tsp, #192\t@ 0xc0\n \tlsls\tr6, r0, #1\n-\tstrb\tr6, [r1, #18]\n+\tstrb\tr2, [r3, #18]\n \tmovs\tr2, r7\n \tsub\tsp, #88\t@ 0x58\n \tlsls\tr6, r0, #1\n \tsub\tsp, #8\n \tlsls\tr6, r0, #1\n \tadd\tsp, #496\t@ 0x1f0\n \tlsls\tr6, r0, #1\n \tadd\tsp, #448\t@ 0x1c0\n \tlsls\tr6, r0, #1\n-\trors\tr4, r0\n+\trors\tr0, r2\n \tmovs\tr2, r7\n ./src/modules/mod_convert.C:1905\n \tldr.w\tr1, [pc, #2144]\t@ 473d0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13698>\n \tadd.w\tr5, sp, #1160\t@ 0x488\n \tadd.w\tr7, sp, #1168\t@ 0x490\n \tadd\tr1, pc\n \tldrb.w\tr3, [r1, #416]\t@ 0x1a0\n@@ -123355,155 +123356,155 @@\n \tblx\tbb24 , std::allocator >::_M_replace(unsigned int, unsigned int, char const*, unsigned int)@plt+0x4>\n \tb.w\t4660c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x128d4>\n \tnop\n \tnop.w\n \t...\n \tadd\tr6, sp, #816\t@ 0x330\n \tlsls\tr6, r0, #1\n-\tadds\tr5, #202\t@ 0xca\n+\tadds\tr5, #214\t@ 0xd6\n \tmovs\tr2, r7\n-\tldr\tr4, [r7, #56]\t@ 0x38\n+\tldr\tr0, [r1, #60]\t@ 0x3c\n \tmovs\tr2, r7\n \tadd\tr6, sp, #296\t@ 0x128\n \tlsls\tr6, r0, #1\n \tadd\tr6, sp, #80\t@ 0x50\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tldr\tr4, [r7, #36]\t@ 0x24\n+\tldr\tr0, [r1, #40]\t@ 0x28\n \tmovs\tr2, r7\n \tadd\tr5, sp, #224\t@ 0xe0\n \tlsls\tr6, r0, #1\n-\tldr\tr4, [r4, #36]\t@ 0x24\n+\tldr\tr0, [r6, #36]\t@ 0x24\n \tmovs\tr2, r7\n-\tldr\tr0, [r6, #32]\n+\tldr\tr4, [r7, #32]\n \tmovs\tr2, r7\n \tadd\tr4, sp, #816\t@ 0x330\n \tlsls\tr6, r0, #1\n-\tadds\tr3, #202\t@ 0xca\n+\tadds\tr3, #214\t@ 0xd6\n \tmovs\tr2, r7\n-\tldr\tr6, [r4, #28]\n+\tldr\tr2, [r6, #28]\n \tmovs\tr2, r7\n \tadd\tr4, sp, #376\t@ 0x178\n \tlsls\tr6, r0, #1\n \tadd\tr4, sp, #280\t@ 0x118\n \tlsls\tr6, r0, #1\n \tadd\tr4, sp, #184\t@ 0xb8\n \tlsls\tr6, r0, #1\n \tadd\tr4, sp, #128\t@ 0x80\n \tlsls\tr6, r0, #1\n-\tldr\tr6, [r1, #24]\n+\tldr\tr2, [r3, #24]\n \tmovs\tr2, r7\n-\tldr\tr0, [r1, #24]\n+\tldr\tr4, [r2, #24]\n \tmovs\tr2, r7\n \tadd\tr3, sp, #960\t@ 0x3c0\n \tlsls\tr6, r0, #1\n \tadd\tr3, sp, #896\t@ 0x380\n \tlsls\tr6, r0, #1\n \tadd\tr3, sp, #816\t@ 0x330\n \tlsls\tr6, r0, #1\n-\tsubs\tr4, #196\t@ 0xc4\n+\tsubs\tr4, #208\t@ 0xd0\n \tmovs\tr2, r7\n-\tldr\tr0, [r2, #124]\t@ 0x7c\n+\tldr\tr4, [r3, #124]\t@ 0x7c\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tadd\tr3, sp, #264\t@ 0x108\n \tlsls\tr6, r0, #1\n-\tsubs\tr4, #88\t@ 0x58\n+\tsubs\tr4, #100\t@ 0x64\n \tmovs\tr2, r7\n \tadd\tr3, sp, #152\t@ 0x98\n \tlsls\tr6, r0, #1\n \tadd\tr3, sp, #80\t@ 0x50\n \tlsls\tr6, r0, #1\n-\tsubs\tr4, #44\t@ 0x2c\n+\tsubs\tr4, #56\t@ 0x38\n \tmovs\tr2, r7\n-\tmovs\tr4, #200\t@ 0xc8\n+\tmovs\tr4, #212\t@ 0xd4\n \tmovs\tr2, r7\n-\tsubs\tr4, #4\n+\tsubs\tr4, #16\n \tmovs\tr2, r7\n-\tldr\tr4, [r7, #0]\n+\tldr\tr0, [r1, #4]\n \tmovs\tr2, r7\n-\tldr\tr0, [r6, #0]\n+\tldr\tr4, [r7, #0]\n \tmovs\tr2, r7\n-\tsubs\tr4, #12\n+\tsubs\tr4, #24\n \tmovs\tr2, r7\n \tadd\tr2, sp, #640\t@ 0x280\n \tlsls\tr6, r0, #1\n-\tldr\tr6, [r3, #112]\t@ 0x70\n+\tldr\tr2, [r5, #112]\t@ 0x70\n \tmovs\tr2, r7\n \tstrb\tr6, [r2, #16]\n \tlsls\tr6, r0, #1\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tadd\tr2, sp, #208\t@ 0xd0\n \tlsls\tr6, r0, #1\n-\tsubs\tr3, #66\t@ 0x42\n+\tsubs\tr3, #78\t@ 0x4e\n \tmovs\tr2, r7\n \tadd\tr2, sp, #48\t@ 0x30\n \tlsls\tr6, r0, #1\n \tadd\tr1, sp, #936\t@ 0x3a8\n \tlsls\tr6, r0, #1\n-\tsubs\tr3, #0\n+\tsubs\tr3, #12\n \tmovs\tr2, r7\n \tadd\tr1, sp, #696\t@ 0x2b8\n \tlsls\tr6, r0, #1\n \tadd\tr1, sp, #320\t@ 0x140\n \tlsls\tr6, r0, #1\n \tadd\tr1, sp, #80\t@ 0x50\n \tlsls\tr6, r0, #1\n-\tldr\tr6, [r6, #100]\t@ 0x64\n+\tldr\tr2, [r0, #104]\t@ 0x68\n \tmovs\tr2, r7\n \tadd\tr0, sp, #976\t@ 0x3d0\n \tlsls\tr6, r0, #1\n-\tldr\tr2, [r4, #100]\t@ 0x64\n+\tldr\tr6, [r5, #100]\t@ 0x64\n \tmovs\tr2, r7\n \tadd\tr0, sp, #856\t@ 0x358\n \tlsls\tr6, r0, #1\n-\tldr\tr4, [r2, #100]\t@ 0x64\n+\tldr\tr0, [r4, #100]\t@ 0x64\n \tmovs\tr2, r7\n-\tldr\tr0, [r2, #100]\t@ 0x64\n+\tldr\tr4, [r3, #100]\t@ 0x64\n \tmovs\tr2, r7\n \tadd\tr0, sp, #712\t@ 0x2c8\n \tlsls\tr6, r0, #1\n \tstrb\tr4, [r5, #9]\n \tlsls\tr6, r0, #1\n-\tstrb\tr6, [r0, #1]\n+\tstrb\tr2, [r2, #1]\n \tmovs\tr2, r7\n \tldrb\tr4, [r1, r5]\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr2, [r1, #84]\t@ 0x54\n+\tstr\tr6, [r2, #84]\t@ 0x54\n \tmovs\tr2, r7\n \tadd\tr7, pc, #896\t@ (adr r7, 4784c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13b14>)\n \tlsls\tr6, r0, #1\n-\tstr\tr4, [r1, #80]\t@ 0x50\n+\tstr\tr0, [r3, #80]\t@ 0x50\n \tmovs\tr2, r7\n-\tsubs\tr0, #184\t@ 0xb8\n+\tsubs\tr0, #196\t@ 0xc4\n \tmovs\tr2, r7\n \tadd\tr7, pc, #384\t@ (adr r7, 47658 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13920>)\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldr\tr4, [r5, #28]\n+\tldr\tr0, [r7, #28]\n \tmovs\tr2, r7\n-\tldr\tr2, [r7, #28]\n+\tldr\tr6, [r0, #32]\n \tmovs\tr2, r7\n-\tldr\tr0, [r1, #32]\n+\tldr\tr4, [r2, #32]\n \tmovs\tr2, r7\n-\tldr\tr6, [r2, #12]\n+\tldr\tr2, [r4, #12]\n \tmovs\tr2, r7\n-\tldc2l\t0, cr0, [ip, #-236]\t@ 0xffffff14\n+\tstc2l\t0, cr0, [r4, #-236]!\t@ 0xffffff14\n ./src/modules/mod_convert.C:2011\n \tldr.w\tr8, [pc, #1492]\t@ 47ac8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13d90>\n ./src/modules/mod_convert.C:2010\n \tldr.w\tr0, [pc, #1492]\t@ 47acc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13d94>\n ./src/modules/mod_convert.C:2011\n \tadd\tr8, pc\n ./src/modules/mod_convert.C:2010\n@@ -124228,106 +124229,106 @@\n \tadd\tr0, pc\n \tblx\tb068 \n \tnop\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xe805ffff\n \tb.n\t4746e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13736>\n-\t\t\t@ instruction: 0xffff1f0a\n+\tvcvt.u32.f32\td17, d6, #1\n \tmovs\tr2, r7\n \tadd\tr4, pc, #1008\t@ (adr r4, 47ec8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x14190>)\n \tlsls\tr6, r0, #1\n \tadd\tr4, pc, #920\t@ (adr r4, 47e74 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1413c>)\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldr\tr4, [r4, #4]\n+\tldr\tr0, [r6, #4]\n \tmovs\tr2, r7\n \tadd\tr4, pc, #648\t@ (adr r4, 47d70 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x14038>)\n \tlsls\tr6, r0, #1\n-\tldr\tr2, [r7, #0]\n+\tldr\tr6, [r0, #4]\n \tmovs\tr2, r7\n \tadd\tr4, pc, #440\t@ (adr r4, 47ca8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13f70>)\n \tlsls\tr6, r0, #1\n-\tcbnz\tr4, 47b2e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13df6>\n+\tcbnz\tr4, 47b30 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13df8>\n \tmovs\tr2, r7\n \tadd\tr4, pc, #216\t@ (adr r4, 47bd0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13e98>)\n \tlsls\tr6, r0, #1\n-\tadds\tr5, #32\n+\tadds\tr5, #44\t@ 0x2c\n \tmovs\tr2, r7\n-\tadds\tr5, #6\n+\tadds\tr5, #18\n \tmovs\tr2, r7\n-\tasrs\tr2, r3, #22\n+\tasrs\tr6, r4, #22\n \tmovs\tr2, r7\n \tadd\tr3, pc, #776\t@ (adr r3, 47e10 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x140d8>)\n \tlsls\tr6, r0, #1\n-\tldr\tr5, [pc, #288]\t@ (47c2c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13ef4>)\n+\tldr\tr5, [pc, #320]\t@ (47c4c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13f14>)\n \tmovs\tr3, r7\n \tldr\tr0, [r5, #84]\t@ 0x54\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadds\tr4, #194\t@ 0xc2\n+\tadds\tr4, #206\t@ 0xce\n \tmovs\tr2, r7\n \tadd\tr3, pc, #400\t@ (adr r3, 47cac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13f74>)\n \tlsls\tr6, r0, #1\n-\tasrs\tr6, r7, #18\n+\tasrs\tr2, r1, #19\n \tmovs\tr2, r7\n \tadd\tr2, pc, #736\t@ (adr r2, 47e04 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x140cc>)\n \tlsls\tr6, r0, #1\n-\tadds\tr3, #244\t@ 0xf4\n+\tadds\tr4, #0\n \tmovs\tr2, r7\n \tldr\tr0, [r6, #68]\t@ 0x44\n \tlsls\tr6, r0, #1\n \tadd\tr2, pc, #544\t@ (adr r2, 47d50 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x14018>)\n \tlsls\tr6, r0, #1\n-\tstr\tr6, [r4, #112]\t@ 0x70\n+\tstr\tr2, [r6, #112]\t@ 0x70\n \tmovs\tr2, r7\n \tadd\tr2, pc, #352\t@ (adr r2, 47c98 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13f60>)\n \tlsls\tr6, r0, #1\n \tadd\tr2, pc, #248\t@ (adr r2, 47c34 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13efc>)\n \tlsls\tr6, r0, #1\n \tadd\tr1, pc, #1008\t@ (adr r1, 47f30 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x141f8>)\n \tlsls\tr6, r0, #1\n-\tldr.w\tr0, [r0, fp, lsl #3]\n+\tldr.w\tr0, [r8, fp, lsl #3]\n \tadd\tr1, pc, #472\t@ (adr r1, 47d20 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13fe8>)\n \tlsls\tr6, r0, #1\n-\tasrs\tr2, r7, #9\n+\tasrs\tr2, r0, #10\n \tmovs\tr4, r7\n \tstrb\tr5, [r5, r2]\n \tvsra.u32\td26, d22, #1\n \tlsls\tr6, r0, #1\n-\tadds\tr2, #66\t@ 0x42\n+\tadds\tr2, #78\t@ 0x4e\n \tmovs\tr2, r7\n-\tsubs\tr0, #38\t@ 0x26\n+\tsubs\tr0, #50\t@ 0x32\n \tmovs\tr2, r7\n-\tstr\tr4, [r7, #104]\t@ 0x68\n+\tstr\tr0, [r1, #108]\t@ 0x6c\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xf79c003b\n-\tstr\tr4, [r7, #88]\t@ 0x58\n+\t\t\t@ instruction: 0xf7a4003b\n+\tstr\tr0, [r1, #92]\t@ 0x5c\n \tmovs\tr2, r7\n-\tsubs\tr4, r6, r1\n+\tsubs\tr0, r0, r2\n \tmovs\tr2, r7\n-\tadds\tr1, #178\t@ 0xb2\n+\tadds\tr1, #190\t@ 0xbe\n \tmovs\tr2, r7\n \tadd\tr0, pc, #520\t@ (adr r0, 47d7c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x14044>)\n \tlsls\tr6, r0, #1\n-\tmovs\tr7, #254\t@ 0xfe\n+\tcmp\tr0, #6\n \tmovs\tr5, r7\n \tadd\tr0, pc, #256\t@ (adr r0, 47c7c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13f44>)\n \tlsls\tr6, r0, #1\n-\tasrs\tr4, r4, #7\n+\tasrs\tr0, r6, #7\n \tmovs\tr2, r7\n-\tstr\tr2, [r2, #68]\t@ 0x44\n+\tstr\tr6, [r3, #68]\t@ 0x44\n \tmovs\tr2, r7\n-\tldrb\tr2, [r0, r5]\n+\tldrb\tr6, [r1, r5]\n \tmovs\tr2, r7\n-\tldrb\tr4, [r5, r4]\n+\tldrb\tr0, [r7, r4]\n \tmovs\tr2, r7\n-\tasrs\tr4, r2, #1\n+\tasrs\tr0, r4, #1\n \tmovs\tr2, r7\n \tb.n\t48224 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x144ec>\n \tmovs\tr1, r7\n /usr/include/c++/10/bits/basic_string.h:6187\n \tldr.w\tr1, [pc, #1400]\t@ 48110 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x143d8>\n \tmov\tr0, r7\n \tadd\tr1, pc\n@@ -125035,91 +125036,91 @@\n \tldr\tr1, [r7, #8]\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tmov\tr7, r9\n \tb.n\t47f46 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1420e>\n-\tldrb\tr2, [r3, r0]\n+\tldrb\tr6, [r4, r0]\n \tmovs\tr2, r7\n-\tcmp\tr7, #212\t@ 0xd4\n+\tcmp\tr7, #224\t@ 0xe0\n \tmovs\tr2, r7\n \tldr\tr6, [sp, #544]\t@ 0x220\n \tlsls\tr6, r0, #1\n-\tstr\tr0, [r4, #28]\n+\tstr\tr0, [r5, #28]\n \tmovs\tr3, r7\n \tldr\tr6, [sp, #392]\t@ 0x188\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrb\tr0, [r4, r6]\n+\tstrb\tr0, [r5, r6]\n \tmovs\tr3, r7\n-\tstr\tr4, [r3, #20]\n+\tstr\tr0, [r5, #20]\n \tmovs\tr2, r7\n-\tstrb\tr4, [r4, r5]\n+\tstrb\tr4, [r5, r5]\n \tmovs\tr3, r7\n-\tstr\tr0, [r2, #20]\n+\tstr\tr4, [r3, #20]\n \tmovs\tr2, r7\n-\tstr\tr6, [r0, #8]\n+\tstr\tr2, [r2, #8]\n \tmovs\tr2, r7\n-\tldrsh\tr4, [r3, r7]\n+\tldrsh\tr0, [r5, r7]\n \tmovs\tr2, r7\n-\tldrh\tr0, [r3, r6]\n+\tldrh\tr4, [r4, r6]\n \tmovs\tr2, r7\n-\tldrh\tr6, [r4, r6]\n+\tldrh\tr2, [r6, r6]\n \tmovs\tr2, r7\n-\tldrh\tr4, [r3, r6]\n+\tldrh\tr0, [r5, r6]\n \tmovs\tr2, r7\n-\tldrh\tr2, [r6, r5]\n+\tldrh\tr6, [r7, r5]\n \tmovs\tr2, r7\n-\tldrh\tr0, [r5, r5]\n+\tldrh\tr4, [r6, r5]\n \tmovs\tr2, r7\n-\tcmp\tr6, #46\t@ 0x2e\n+\tcmp\tr6, #58\t@ 0x3a\n \tmovs\tr2, r7\n-\tldrh\tr0, [r7, r5]\n+\tldrh\tr4, [r0, r6]\n \tmovs\tr2, r7\n-\tcmp\tr6, #22\n+\tcmp\tr6, #34\t@ 0x22\n \tmovs\tr2, r7\n-\tcmp\tr6, #76\t@ 0x4c\n+\tcmp\tr6, #88\t@ 0x58\n \tmovs\tr2, r7\n-\tasrs\tr2, r4, #26\n+\tasrs\tr6, r5, #26\n \tmovs\tr2, r7\n-\tcmp\tr6, #10\n+\tcmp\tr6, #22\n \tmovs\tr2, r7\n-\tcmp\tr5, #242\t@ 0xf2\n+\tcmp\tr5, #254\t@ 0xfe\n \tmovs\tr2, r7\n-\tcmp\tr5, #218\t@ 0xda\n+\tcmp\tr5, #230\t@ 0xe6\n \tmovs\tr2, r7\n-\tldrh\tr2, [r3, r4]\n+\tldrh\tr6, [r4, r4]\n \tmovs\tr2, r7\n-\tcmp\tr5, #214\t@ 0xd6\n+\tcmp\tr5, #226\t@ 0xe2\n \tmovs\tr2, r7\n-\tldrh\tr2, [r0, r4]\n+\tldrh\tr6, [r1, r4]\n \tmovs\tr2, r7\n-\tldrh\tr6, [r0, r4]\n+\tldrh\tr2, [r2, r4]\n \tmovs\tr2, r7\n-\tstr\tr6, [r6, #96]\t@ 0x60\n+\tstr\tr6, [r7, #96]\t@ 0x60\n \tmovs\tr7, r7\n-\tstr\tr4, [r0, #4]\n+\tstr\tr0, [r2, #4]\n \tmovs\tr2, r7\n-\tstr\tr2, [r6, #0]\n+\tstr\tr6, [r7, #0]\n \tmovs\tr2, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsh\tr0, [r4, r1]\n+\tldrsh\tr4, [r5, r1]\n \tmovs\tr2, r7\n \tb.n\t47a84 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x13d4c>\n \tmovs\tr1, r7\n \tldr\tr1, [sp, #920]\t@ 0x398\n \tlsls\tr6, r0, #1\n-\tldrb\tr0, [r5, r7]\n+\tldrb\tr4, [r6, r7]\n \tmovs\tr2, r7\n \tsvc\t138\t@ 0x8a\n \tmovs\tr1, r7\n std::__cxx11::list >*, std::allocator >*> >::~list():\n /usr/include/c++/10/bits/stl_list.h:827\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr5, r0\n@@ -125835,19 +125836,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr4, r5, #30\n+\tlsrs\tr0, r7, #30\n \tmovs\tr2, r7\n-\tlsrs\tr0, r4, #30\n+\tlsrs\tr4, r5, #30\n \tmovs\tr2, r7\n-\tadds\tr7, #112\t@ 0x70\n+\tadds\tr7, #120\t@ 0x78\n \tmovs\tr4, r7\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -125923,15 +125924,15 @@\n \tsubs\tr1, r1, r6\n \tb.n\t48716 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x149de>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (48734 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x149fc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrb\tr0, [r2, r4]\n+\tldrb\tr4, [r3, r4]\n \tmovs\tr2, r7\n std::vector >, std::allocator > > >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrd\tr4, r5, [r0]\n@@ -126895,15 +126896,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t48e30 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x150f8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (48e50 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x15118>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tble.n\t48e0c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x150d4>\n+\tble.n\t48e24 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x150ec>\n \tmovs\tr1, r7\n ReadPool::ReadContainer::sortContainerToGivenOrder(std::vector > const&):\n ./src/modules/../../src/mira/readpool.H:146\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr\tr0, [pc, #764]\t@ (49158 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x15420>)\n \tsub\tsp, #260\t@ 0x104\n@@ -127333,23 +127334,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr2, [r0, r1]\n+\tstrb\tr6, [r1, r1]\n \tmovs\tr2, r7\n \tlsrs\tr0, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr0, [r7, r7]\n+\tstrb\tr4, [r0, r0]\n \tmovs\tr2, r7\n std::__cxx11::_List_base >::_M_clear():\n /usr/include/c++/10/bits/list.tcc:66\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/list.tcc:70\n \tldr\tr4, [r0, #0]\n /usr/include/c++/10/bits/list.tcc:71\n@@ -127717,15 +127718,15 @@\n \tnop\n \tsubs\tr5, #48\t@ 0x30\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr4, #130\t@ 0x82\n \tlsls\tr6, r0, #1\n-\tblt.n\t49314 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x155dc>\n+\tblt.n\t4932c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x155f4>\n \tmovs\tr1, r7\n \tldmia\tr2!, {r3, r5}\n \tmovs\tr1, r7\n std::_Bvector_base >::_M_deallocate():\n /usr/include/c++/10/bits/stl_bvector.h:560\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -130231,24 +130232,24 @@\n \tmovs\tr0, r0\n \tcmp\tr4, #198\t@ 0xc6\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r1, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr6, r1, #2\n+\tlsrs\tr2, r3, #2\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xf2620039\n-\tstrb\tr0, [r0, #2]\n+\t\t\t@ instruction: 0xf26e0039\n+\tstrb\tr0, [r1, #2]\n \tmovs\tr5, r7\n \tcmp\tr3, #14\n \tlsls\tr6, r0, #1\n-\tsubs\tr2, #136\t@ 0x88\n+\tsubs\tr2, #144\t@ 0x90\n \tmovs\tr3, r7\n-\tsubs\tr7, #44\t@ 0x2c\n+\tsubs\tr7, #56\t@ 0x38\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n mme_askDoubleNP(std::__cxx11::basic_string, std::allocator > const&, double&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/modules/mod_memestim.C:80\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r1\n@@ -130519,21 +130520,21 @@\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr0, #218\t@ 0xda\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr6, #66\t@ 0x42\n+\tsubs\tr6, #78\t@ 0x4e\n \tmovs\tr2, r7\n \tlsrs\tr4, r1, #25\n \tmovs\tr0, r0\n-\tsubs\tr1, #104\t@ 0x68\n+\tsubs\tr1, #112\t@ 0x70\n \tmovs\tr3, r7\n-\tsubs\tr6, #26\n+\tsubs\tr6, #38\t@ 0x26\n \tmovs\tr2, r7\n \tmovs\tr7, #240\t@ 0xf0\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n mme_askDouble(std::__cxx11::basic_string, std::allocator > const&, double&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/modules/mod_memestim.C:123\n@@ -132005,64 +132006,64 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf0a04129\n \tmovs\tr5, #180\t@ 0xb4\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r1, r3, r4, r7}\n+\tstmia\tr0!, {r1, r2, r5, r7}\n \tmovs\tr1, r7\n \tmovs\tr5, #144\t@ 0x90\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmcr2\t0, 0, r0, cr14, cr9, {1}\n+\tmrc2\t0, 0, r0, cr10, cr9, {1}\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #384\t@ (adr r0, 4b468 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x17730>)\n+\tadd\tr0, pc, #416\t@ (adr r0, 4b488 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x17750>)\n \tmovs\tr2, r7\n-\tsubs\tr3, #186\t@ 0xba\n+\tsubs\tr3, #198\t@ 0xc6\n \tmovs\tr2, r7\n-\tldc2l\t0, cr0, [r2, #228]\t@ 0xe4\n-\tsubs\tr2, #162\t@ 0xa2\n+\tldc2l\t0, cr0, [lr, #228]\t@ 0xe4\n+\tsubs\tr2, #174\t@ 0xae\n \tmovs\tr2, r7\n-\tsubs\tr4, #26\n+\tsubs\tr4, #38\t@ 0x26\n \tmovs\tr2, r7\n-\tsubs\tr3, #146\t@ 0x92\n+\tsubs\tr3, #158\t@ 0x9e\n \tmovs\tr2, r7\n-\tsubs\tr3, #138\t@ 0x8a\n+\tsubs\tr3, #150\t@ 0x96\n \tmovs\tr2, r7\n-\tsubs\tr3, #58\t@ 0x3a\n+\tsubs\tr3, #70\t@ 0x46\n \tmovs\tr2, r7\n-\tadds\tr7, #126\t@ 0x7e\n+\tadds\tr7, #138\t@ 0x8a\n \tmovs\tr2, r7\n-\tsubs\tr0, #14\n+\tsubs\tr0, #26\n \tmovs\tr2, r7\n-\tsubs\tr0, #42\t@ 0x2a\n+\tsubs\tr0, #54\t@ 0x36\n \tmovs\tr2, r7\n-\tsubs\tr0, #84\t@ 0x54\n+\tsubs\tr0, #96\t@ 0x60\n \tmovs\tr2, r7\n-\tbmi.n\t4b278 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x17540>\n+\tbmi.n\t4b288 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x17550>\n \tmovs\tr2, r7\n-\tsubs\tr0, #82\t@ 0x52\n+\tsubs\tr0, #94\t@ 0x5e\n \tmovs\tr2, r7\n-\tsubs\tr0, #66\t@ 0x42\n+\tsubs\tr0, #78\t@ 0x4e\n \tmovs\tr2, r7\n-\tcmp\tr3, #250\t@ 0xfa\n+\tcmp\tr4, #2\n \tmovs\tr3, r7\n-\tcmp\tr2, #130\t@ 0x82\n+\tcmp\tr2, #138\t@ 0x8a\n \tmovs\tr3, r7\n-\tsubs\tr0, #6\n+\tsubs\tr0, #18\n \tmovs\tr2, r7\n-\tcbz\tr6, 4b396 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1765e>\n+\tcbz\tr2, 4b39a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x17662>\n \tmovs\tr1, r7\n-\tadds\tr7, #222\t@ 0xde\n-\tmovs\tr2, r7\n \tadds\tr7, #234\t@ 0xea\n \tmovs\tr2, r7\n+\tadds\tr7, #246\t@ 0xf6\n+\tmovs\tr2, r7\n \tadds\tr4, r1, #4\n \tlsls\tr6, r0, #1\n \tmov.w\tr8, #25856\t@ 0x6500\n \tmovt\tr8, #7629\t@ 0x1dcd\n \tcmp\tr3, r8\n \tsbcs.w\tr0, r2, #0\n \titt\tlt\n@@ -132712,33 +132713,33 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.w\t4ab3c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x16e04>\n \tnop.w\n \t...\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr5, #210\t@ 0xd2\n+\tadds\tr5, #222\t@ 0xde\n \tmovs\tr2, r7\n-\tadds\tr4, #58\t@ 0x3a\n+\tadds\tr4, #70\t@ 0x46\n \tmovs\tr2, r7\n-\tadds\tr1, #158\t@ 0x9e\n+\tadds\tr1, #170\t@ 0xaa\n \tmovs\tr2, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr0, #164\t@ 0xa4\n+\tadds\tr0, #176\t@ 0xb0\n \tmovs\tr2, r7\n-\tcmp\tr7, #242\t@ 0xf2\n+\tcmp\tr7, #254\t@ 0xfe\n \tmovs\tr2, r7\n ./src/modules/mod_memestim.C:281\n \tldrb.w\tr4, [sp, #83]\t@ 0x53\n \tadd.w\tr3, sp, #83\t@ 0x53\n ./src/modules/mod_memestim.C:285\n \tldr\tr5, [sp, #88]\t@ 0x58\n \tadd\tr1, sp, #88\t@ 0x58\n@@ -133739,35 +133740,35 @@\n \tb.n\t4bd9e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x18066>\n \tnop\n \tnop.w\n \tstmia\tr3!, {r7}\n \tlsls\tr1, r1, #7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n-\tcmp\tr7, #76\t@ 0x4c\n+\tcmp\tr7, #88\t@ 0x58\n \tmovs\tr2, r7\n-\tcmp\tr6, #224\t@ 0xe0\n+\tcmp\tr6, #236\t@ 0xec\n \tmovs\tr2, r7\n-\tcmp\tr5, #226\t@ 0xe2\n+\tcmp\tr5, #238\t@ 0xee\n \tmovs\tr2, r7\n-\tcmp\tr5, #114\t@ 0x72\n+\tcmp\tr5, #126\t@ 0x7e\n \tmovs\tr2, r7\n-\tcmp\tr5, #14\n+\tcmp\tr5, #26\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr4, #220\t@ 0xdc\n+\tcmp\tr4, #232\t@ 0xe8\n \tmovs\tr2, r7\n-\tcmp\tr4, #86\t@ 0x56\n+\tcmp\tr4, #98\t@ 0x62\n \tmovs\tr2, r7\n-\tcmp\tr1, #204\t@ 0xcc\n+\tcmp\tr1, #216\t@ 0xd8\n \tmovs\tr2, r7\n-\tcmp\tr0, #196\t@ 0xc4\n+\tcmp\tr0, #208\t@ 0xd0\n \tmovs\tr2, r7\n-\tcmp\tr0, #250\t@ 0xfa\n+\tcmp\tr1, #6\n \tmovs\tr2, r7\n std::_Hashtable, std::allocator >, std::pair, std::allocator > const, unsigned int>, std::allocator, std::allocator > const, unsigned int> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::find(std::__cxx11::basic_string, std::allocator > const&) [clone .constprop.0]:\n /usr/include/c++/10/bits/hashtable.h:1447\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n /usr/include/c++/10/bits/functional_hash.h:197\n \tmovw\tr2, #26887\t@ 0x6907\n \tmovt\tr2, #50959\t@ 0xc70f\n@@ -134006,40 +134007,40 @@\n \tb.n\t4bf32 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x181fa>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tasrs\tr6, r2, #1\n \tlsls\tr6, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr4, #174\t@ 0xae\n+\tcmp\tr4, #186\t@ 0xba\n \tmovs\tr2, r7\n \tlsrs\tr0, r3, #15\n \tmovs\tr0, r0\n-\tcmp\tr6, #0\n-\tmovs\tr2, r7\n-\tcmp\tr6, #24\n-\tmovs\tr2, r7\n-\tcmp\tr6, #44\t@ 0x2c\n-\tmovs\tr2, r7\n-\tcmp\tr6, #72\t@ 0x48\n+\tcmp\tr6, #12\n \tmovs\tr2, r7\n-\tcmp\tr6, #100\t@ 0x64\n+\tcmp\tr6, #36\t@ 0x24\n \tmovs\tr2, r7\n-\tcmp\tr6, #104\t@ 0x68\n+\tcmp\tr6, #56\t@ 0x38\n \tmovs\tr2, r7\n-\tcmp\tr6, #108\t@ 0x6c\n+\tcmp\tr6, #84\t@ 0x54\n \tmovs\tr2, r7\n \tcmp\tr6, #112\t@ 0x70\n \tmovs\tr2, r7\n \tcmp\tr6, #116\t@ 0x74\n \tmovs\tr2, r7\n-\tcmp\tr6, #122\t@ 0x7a\n+\tcmp\tr6, #120\t@ 0x78\n+\tmovs\tr2, r7\n+\tcmp\tr6, #124\t@ 0x7c\n \tmovs\tr2, r7\n \tcmp\tr6, #128\t@ 0x80\n \tmovs\tr2, r7\n+\tcmp\tr6, #134\t@ 0x86\n+\tmovs\tr2, r7\n+\tcmp\tr6, #140\t@ 0x8c\n+\tmovs\tr2, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n General::checkNamePresence(std::__cxx11::basic_string, std::allocator >&):\n ./src/modules/misc.C:148\n \tpush\t{r3, lr}\n ./src/modules/misc.C:149\n \tldr\tr3, [pc, #24]\t@ (4c090 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x18358>)\n@@ -134727,25 +134728,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr6, r3, #16\n \tlsls\tr6, r0, #1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcmp\tr3, #56\t@ 0x38\n+\tcmp\tr3, #68\t@ 0x44\n \tmovs\tr2, r7\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr2, #40\t@ 0x28\n+\tcmp\tr2, #52\t@ 0x34\n \tmovs\tr2, r7\n-\tcmp\tr2, #6\n+\tcmp\tr2, #18\n \tmovs\tr2, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n std::unordered_map, std::allocator >, unsigned int, std::hash, std::allocator > >, std::equal_to, std::allocator > >, std::allocator, std::allocator > const, unsigned int> > >::~unordered_map():\n /usr/include/c++/10/bits/unordered_map.h:102\n@@ -136671,21 +136672,21 @@\n \tbne.n\t4d2b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1957c>\n \tadd\tsp, #12\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tldc2l\t0, cr0, [r4, #-276]!\t@ 0xfffffeec\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #760\t@ (adr r5, 4d5bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x19884>)\n+\tadd\tr5, pc, #792\t@ (adr r5, 4d5dc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x198a4>)\n \tmovs\tr3, r7\n-\tadds\tr2, r0, #2\n+\tadds\tr6, r1, #2\n \tmovs\tr2, r7\n-\tadds\tr2, r6, #1\n+\tadds\tr6, r7, #1\n \tmovs\tr2, r7\n-\tadds\tr4, r4, #1\n+\tadds\tr0, r6, #1\n \tmovs\tr2, r7\n \tstc2l\t0, cr0, [r2], {69}\t@ 0x45\n HashStatistics::sortHashStatComparatorByLow24bit(HashStatistics::hashstat_t const&, HashStatistics::hashstat_t const&):\n ./src/mira/../../src/mira/hashstats.H:415\n \tldr\tr3, [pc, #60]\t@ (4d314 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x195dc>)\n ./src/mira/../../src/mira/hashstats.H:416\n \tldr\tr2, [pc, #64]\t@ (4d318 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x195e0>)\n@@ -137695,21 +137696,21 @@\n \tbne.n\t4d9bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x19c84>\n \tadd\tsp, #12\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \t\t\t@ instruction: 0xf66c0045\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #728]\t@ 0x2d8\n+\tldr\tr6, [sp, #760]\t@ 0x2f8\n \tmovs\tr3, r7\n-\tasrs\tr2, r7, #21\n+\tasrs\tr6, r0, #22\n \tmovs\tr2, r7\n-\tasrs\tr2, r5, #21\n+\tasrs\tr6, r6, #21\n \tmovs\tr2, r7\n-\tasrs\tr4, r3, #21\n+\tasrs\tr0, r5, #21\n \tmovs\tr2, r7\n \tsubs.w\tr0, sl, #12910592\t@ 0xc50000\n HashStatistics >::sortHashStatComparatorByLow24bit(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&):\n ./src/mira/../../src/mira/hashstats.H:415\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr4, [pc, #212]\t@ (4dab8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x19d80>)\n \tldr\tr2, [pc, #216]\t@ (4dabc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x19d84>)\n@@ -138943,21 +138944,21 @@\n \tbne.n\t4e2a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1a568>\n \tadd\tsp, #12\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tstc\t0, cr0, [r8, #276]\t@ 0x114\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #840]\t@ 0x348\n+\tstr\tr5, [sp, #872]\t@ 0x368\n \tmovs\tr3, r7\n-\tlsrs\tr6, r2, #18\n+\tlsrs\tr2, r4, #18\n \tmovs\tr2, r7\n-\tlsrs\tr6, r0, #18\n+\tlsrs\tr2, r2, #18\n \tmovs\tr2, r7\n-\tlsrs\tr0, r7, #17\n+\tlsrs\tr4, r0, #18\n \tmovs\tr2, r7\n \tldcl\t0, cr0, [r6], {69}\t@ 0x45\n HashStatistics >::sortHashStatComparatorByLow24bit(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&):\n ./src/mira/../../src/mira/hashstats.H:415\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr4, [pc, #484]\t@ (4e4ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1a774>)\n \tldr\tr2, [pc, #488]\t@ (4e4b0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1a778>)\n@@ -140518,21 +140519,21 @@\n \tadd\tsp, #12\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tb.n\t4f20c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1b4d4>\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrh\tr6, [r4, #16]\n+\tldrh\tr6, [r5, #16]\n \tmovs\tr3, r7\n-\tlsls\tr2, r5, #3\n+\tlsls\tr6, r6, #3\n \tmovs\tr2, r7\n-\tlsls\tr2, r3, #3\n+\tlsls\tr6, r4, #3\n \tmovs\tr2, r7\n-\tlsls\tr4, r1, #3\n+\tlsls\tr0, r3, #3\n \tmovs\tr2, r7\n \tb.n\t4f0c0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1b388>\n \tlsls\tr5, r0, #1\n HashStatistics >::sortHashStatComparatorByLow24bit(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&):\n ./src/mira/../../src/mira/hashstats.H:415\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr4, [pc, #976]\t@ (4f244 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1b50c>)\n@@ -142646,31 +142647,31 @@\n \tmovs\tr0, r0\n \tbcc.n\t4ff64 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c22c>\n \tlsls\tr5, r0, #1\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf2780039\n+\t\t\t@ instruction: 0xf2840039\n+\t\t\t@ instruction: 0xf2720039\n+\t\t\t@ instruction: 0xf26a0039\n \t\t\t@ instruction: 0xf2660039\n-\t\t\t@ instruction: 0xf25e0039\n-\t\t\t@ instruction: 0xf25a0039\n-\t\t\t@ instruction: 0xf21e0039\n+\t\t\t@ instruction: 0xf22a0039\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf0ea0039\n-\t\t\t@ instruction: 0xf0fa0039\n+\t\t\t@ instruction: 0xf0f60039\n+\tadd.w\tr0, r6, #57\t@ 0x39\n \tlsrs\tr0, r6, #9\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n@@ -143144,19 +143145,19 @@\n \tmovs\tr0, r0\n \tldmia\tr5, {r3, r4, r5, r7}\n \tlsls\tr5, r0, #1\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstc\t0, cr0, [r0, #-228]\t@ 0xffffff1c\n+\tstc\t0, cr0, [ip, #-228]\t@ 0xffffff1c\n+\tldcl\t0, cr0, [ip], #228\t@ 0xe4\n+\tldcl\t0, cr0, [r4], #228\t@ 0xe4\n \tldcl\t0, cr0, [r0], #228\t@ 0xe4\n-\tstcl\t0, cr0, [r8], #228\t@ 0xe4\n-\tstcl\t0, cr0, [r4], #228\t@ 0xe4\n-\tstc\t0, cr0, [r8], #228\t@ 0xe4\n+\tldc\t0, cr0, [r4], #228\t@ 0xe4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #232\t@ 0xe8\n /usr/include/c++/10/ostream:391\n \tldr\tr6, [pc, #396]\t@ (5048c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c754>)\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, r8\n \tadd\tr4, sp, #168\t@ 0xa8\n@@ -143375,16 +143376,16 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xeb3a0039\n-\tadc.w\tr0, sl, r9, rrx\n+\tadc.w\tr0, r6, r9, rrx\n+\tadcs.w\tr0, r6, r9, rrx\n \tlsrs\tr4, r2, #13\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n@@ -144200,37 +144201,37 @@\n ./src/mira/hashstats_sdbg.C:640 (discriminator 15)\n \tmov\tr0, r6\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t50a7c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1cd44>\n \tb.n\t50ad2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1cd9a>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t507d0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca98>\n+\tb.n\t507e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1cab0>\n \tmovs\tr1, r7\n-\tb.n\t507b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca7c>\n+\tb.n\t507cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca94>\n \tmovs\tr1, r7\n-\tb.n\t507a8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca70>\n+\tb.n\t507c0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca88>\n \tmovs\tr1, r7\n-\tb.n\t507a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca6c>\n+\tb.n\t507bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca84>\n \tmovs\tr1, r7\n-\tb.n\t50730 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c9f8>\n+\tb.n\t50748 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ca10>\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t504e4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c7ac>\n+\tb.n\t504fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c7c4>\n \tmovs\tr1, r7\n-\tb.n\t50508 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c7d0>\n+\tb.n\t50520 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1c7e8>\n \tmovs\tr1, r7\n \tlsrs\tr4, r7, #7\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -145168,37 +145169,37 @@\n ./src/mira/hashstats_sdbg.C:640 (discriminator 15)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t51220 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d4e8>\n \tb.n\t51276 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d53e>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tudf\t#228\t@ 0xe4\n+\tudf\t#240\t@ 0xf0\n \tmovs\tr1, r7\n-\tudf\t#210\t@ 0xd2\n+\tudf\t#222\t@ 0xde\n \tmovs\tr1, r7\n-\tudf\t#200\t@ 0xc8\n+\tudf\t#212\t@ 0xd4\n \tmovs\tr1, r7\n-\tudf\t#196\t@ 0xc4\n+\tudf\t#208\t@ 0xd0\n \tmovs\tr1, r7\n-\tudf\t#136\t@ 0x88\n+\tudf\t#148\t@ 0x94\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tble.n\t51340 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d608>\n+\tble.n\t51358 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d620>\n \tmovs\tr1, r7\n-\tble.n\t51364 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d62c>\n+\tble.n\t5137c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d644>\n \tmovs\tr1, r7\n \tlsrs\tr4, r0, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -145276,15 +145277,15 @@\n \tsubs\tr1, r1, r6\n \tb.n\t5131a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d5e2>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (51338 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d600>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tbne.n\t51354 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d61c>\n+\tbne.n\t5136c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1d634>\n \tmovs\tr1, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n VLuint<128u> nsvhash::reverseComplement >(VLuint<128u>&, unsigned int):\n ./src/mira/../../src/mira/vhash.H:128\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr9, r0\n@@ -145501,15 +145502,15 @@\n \tnop\n \tnop.w\n \t...\n \tpop\t{r1, r4}\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tudf\t#234\t@ 0xea\n+\tudf\t#246\t@ 0xf6\n \tmovs\tr1, r7\n \trevsh\tr0, r0\n \tlsls\tr5, r0, #1\n VLuint<256u> nsvhash::reverseComplement >(VLuint<256u>&, unsigned int):\n ./src/mira/../../src/mira/vhash.H:128\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/../../src/mira/vhash.H:129\n@@ -146009,15 +146010,15 @@\n ./src/mira/../../src/mira/vhash.H:130\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \trev\tr6, r7\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tble.n\t519ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1dc74>\n+\tble.n\t519c4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1dc8c>\n \tmovs\tr1, r7\n \t\t\t@ instruction: 0xb642\n \tlsls\tr5, r0, #1\n VLuint<512u> nsvhash::reverseComplement >(VLuint<512u>&, unsigned int):\n ./src/mira/../../src/mira/vhash.H:128\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tsub.w\tip, r1, #8\n@@ -146683,15 +146684,15 @@\n ./src/mira/../../src/mira/vhash.H:130\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \tpush\t{r3, r4, r5, r7, lr}\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbhi.n\t51ff4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1e2bc>\n+\tbhi.n\t5200c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1e2d4>\n \tmovs\tr1, r7\n \tadd\tr7, sp, #688\t@ 0x2b0\n \tlsls\tr5, r0, #1\n std::vector::hashstatnode_t, std::allocator::hashstatnode_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t52216 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1e4de>\n@@ -147226,15 +147227,15 @@\n \tmovw\tr5, #65528\t@ 0xfff8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t52584 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1e84c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (525ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1e874>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr2, [r5, #120]\t@ 0x78\n+\tldr\tr6, [r6, #120]\t@ 0x78\n \tmovs\tr1, r7\n HashStatistics::priv_sdbg_populateHashStatNodes():\n ./src/mira/hashstats_sdbg.C:87\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n \tldr\tr1, [pc, #984]\t@ (52990 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ec58>)\n \tvpush\t{d8-d12}\n@@ -147708,31 +147709,31 @@\n \tlsls\tr5, r0, #1\n \tadd\tr1, sp, #624\t@ 0x270\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r1, r4, r5, r6, r7}\n+\tldmia\tr0!, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr1, r7\n-\tudf\t#42\t@ 0x2a\n+\tudf\t#50\t@ 0x32\n \tmovs\tr2, r7\n-\tstr\tr1, [sp, #96]\t@ 0x60\n+\tstr\tr1, [sp, #128]\t@ 0x80\n \tmovs\tr3, r7\n-\tldmia\tr0!, {r1, r2, r3, r4, r7}\n+\tldmia\tr0!, {r1, r3, r5, r7}\n \tmovs\tr1, r7\n-\tstmia\tr7!, {r1, r3, r6, r7}\n+\tstmia\tr7!, {r1, r2, r4, r6, r7}\n \tmovs\tr1, r7\n-\tbgt.n\t52900 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ebc8>\n+\tbgt.n\t52910 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ebd8>\n \tmovs\tr2, r7\n-\tldrh\tr2, [r2, #60]\t@ 0x3c\n+\tldrh\tr2, [r3, #60]\t@ 0x3c\n \tmovs\tr3, r7\n-\tstmia\tr7!, {r3, r4}\n+\tstmia\tr7!, {r2, r5}\n \tmovs\tr1, r7\n-\tstmia\tr6!, {r6, r7}\n+\tstmia\tr6!, {r2, r3, r6, r7}\n \tmovs\tr1, r7\n ./src/mira/hashstats_sdbg.C:169\n \tcmp\tr5, #0\n \tblt.w\t52bac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1ee74>\n /usr/include/c++/10/bits/stl_vector.h:919 (discriminator 2)\n \tldrd\tr3, r6, [r9, #152]\t@ 0x98\n \tsubs\tr4, r6, r3\n@@ -148256,33 +148257,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr4!, {r1, r2, r3, r4, r5, r7}\n+\tstmia\tr4!, {r1, r3, r6, r7}\n \tmovs\tr1, r7\n-\tstmia\tr4!, {r1, r4, r5, r7}\n+\tstmia\tr4!, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr1, r7\n \tlsrs\tr0, r4, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tadd\tr4, pc, #40\t@ (adr r4, 52e1c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f0e4>)\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r3, r4}\n+\tstmia\tr3!, {r2, r5}\n \tmovs\tr1, r7\n-\tstmia\tr3!, {r2, r6}\n+\tstmia\tr3!, {r4, r6}\n \tmovs\tr1, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::vector::dbgseq_t, std::allocator::dbgseq_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tvpush\t{d8}\n@@ -148742,15 +148743,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t531ce , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f496>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (53200 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1f4c8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstr\tr0, [r3, #52]\t@ 0x34\n+\tstr\tr4, [r4, #52]\t@ 0x34\n \tmovs\tr1, r7\n HashStatistics::priv_sdbg_calcExpectedCopyNumbers():\n ./src/mira/hashstats_sdbg.C:346\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n \tldr.w\tr3, [pc, #2216]\t@ 53ab4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1fd7c>\n \tsub\tsp, #68\t@ 0x44\n@@ -149899,23 +149900,23 @@\n \tnop\n \tldr\tr5, [sp, #304]\t@ 0x130\n \tlsls\tr5, r0, #1\n \tldr\tr5, [sp, #280]\t@ 0x118\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tnop\t{15}\n-\tmovs\tr1, r7\n-\tldr\tr1, [sp, #960]\t@ 0x3c0\n+\titt\t\n+\tmov\tr1, r7\n+\tldr\tr1, [sp, #960]\t@ 0x3c0\n \tlsls\tr5, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcbnz\tr6, 53afe , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1fdc6>\n+\tcbnz\tr2, 53b02 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x1fdca>\n \tmovs\tr1, r7\n-\tldr\tr3, [sp, #424]\t@ 0x1a8\n+\tldr\tr3, [sp, #456]\t@ 0x1c8\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_calcExpectedCopyNumbers():\n ./src/mira/hashstats_sdbg.C:346\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n@@ -151071,23 +151072,23 @@\n \tb.n\t5436a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x20632>\n \tstr\tr4, [sp, #392]\t@ 0x188\n \tlsls\tr5, r0, #1\n \tstr\tr4, [sp, #336]\t@ 0x150\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb718\n+\t\t\t@ instruction: 0xb724\n \tmovs\tr1, r7\n \tstr\tr1, [sp, #96]\t@ 0x60\n \tlsls\tr5, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsub\tsp, #408\t@ 0x198\n+\tsub\tsp, #456\t@ 0x1c8\n \tmovs\tr1, r7\n-\tstr\tr2, [sp, #584]\t@ 0x248\n+\tstr\tr2, [sp, #616]\t@ 0x268\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_calcExpectedCopyNumbers():\n ./src/mira/hashstats_sdbg.C:346\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n@@ -152239,23 +152240,23 @@\n \tb.n\t54c2e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x20ef6>\n \tldrh\tr0, [r6, #28]\n \tlsls\tr5, r0, #1\n \tldrh\tr2, [r5, #28]\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #336\t@ 0x150\n+\tadd\tr6, sp, #384\t@ 0x180\n \tmovs\tr1, r7\n \tldrh\tr4, [r2, #2]\n \tlsls\tr5, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #136\t@ 0x88\n+\tadd\tr0, sp, #184\t@ 0xb8\n \tmovs\tr1, r7\n-\tldrh\tr6, [r1, #14]\n+\tldrh\tr6, [r2, #14]\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_calcExpectedCopyNumbers():\n ./src/mira/hashstats_sdbg.C:346\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n@@ -153407,23 +153408,23 @@\n \tb.n\t554f2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x217ba>\n \tstrh\tr4, [r5, #22]\n \tlsls\tr5, r0, #1\n \tstrh\tr6, [r4, #22]\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #576\t@ (adr r5, 55754 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x21a1c>)\n+\tadd\tr5, pc, #624\t@ (adr r5, 55784 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x21a4c>)\n \tmovs\tr1, r7\n \tldrb\tr0, [r2, #30]\n \tlsls\tr5, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #376]\t@ 0x178\n+\tldr\tr7, [sp, #424]\t@ 0x1a8\n \tmovs\tr1, r7\n-\tstrh\tr2, [r1, #8]\n+\tstrh\tr2, [r2, #8]\n \tmovs\tr2, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::vector >::hashstatnode_t, std::allocator >::hashstatnode_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t5567e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x21946>\n@@ -153958,15 +153959,15 @@\n \tmovw\tr5, #65528\t@ 0xfff8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t559ec , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x21cb4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (55a14 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x21cdc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tsubs\tr3, #66\t@ 0x42\n+\tsubs\tr3, #78\t@ 0x4e\n \tmovs\tr1, r7\n HashStatistics >::priv_sdbg_populateHashStatNodes():\n ./src/mira/hashstats_sdbg.C:87\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n \tldr\tr1, [pc, #816]\t@ (55d50 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x22018>)\n \tvpush\t{d8-d11}\n@@ -154349,31 +154350,31 @@\n \tlsls\tr5, r0, #1\n \tstrb\tr4, [r6, #20]\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #544]\t@ 0x220\n+\tstr\tr4, [sp, #592]\t@ 0x250\n \tmovs\tr1, r7\n-\tadd\tr1, sp, #752\t@ 0x2f0\n+\tadd\tr1, sp, #784\t@ 0x310\n \tmovs\tr2, r7\n-\tldrb\tr0, [r6, r0]\n+\tldrb\tr0, [r7, r0]\n \tmovs\tr3, r7\n-\tstr\tr3, [sp, #728]\t@ 0x2d8\n+\tstr\tr3, [sp, #776]\t@ 0x308\n \tmovs\tr1, r7\n-\tstr\tr3, [sp, #384]\t@ 0x180\n+\tstr\tr3, [sp, #432]\t@ 0x1b0\n \tmovs\tr1, r7\n-\tadd\tr0, sp, #216\t@ 0xd8\n+\tadd\tr0, sp, #248\t@ 0xf8\n \tmovs\tr2, r7\n-\tldrh\tr4, [r4, r4]\n+\tldrh\tr4, [r5, r4]\n \tmovs\tr3, r7\n-\tstr\tr2, [sp, #680]\t@ 0x2a8\n+\tstr\tr2, [sp, #728]\t@ 0x2d8\n \tmovs\tr1, r7\n-\tstr\tr2, [sp, #328]\t@ 0x148\n+\tstr\tr2, [sp, #376]\t@ 0x178\n \tmovs\tr1, r7\n /usr/include/c++/10/bits/stl_vector.h:919\n \tsubs\tr4, r5, r3\n \tldr\tr0, [sp, #40]\t@ 0x28\n ./src/mira/hashstats_sdbg.C:136\n \tldr\tr2, [sp, #24]\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -155086,33 +155087,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr0, [r4, #62]\t@ 0x3e\n+\tldrh\tr4, [r5, #62]\t@ 0x3e\n \tmovs\tr1, r7\n-\tldrh\tr4, [r2, #62]\t@ 0x3e\n+\tldrh\tr0, [r4, #62]\t@ 0x3e\n \tmovs\tr1, r7\n \tlsrs\tr0, r6, #5\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tldr\tr4, [r1, #112]\t@ 0x70\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrh\tr6, [r7, #44]\t@ 0x2c\n+\tldrh\tr2, [r1, #46]\t@ 0x2e\n \tmovs\tr1, r7\n-\tldrh\tr2, [r5, #46]\t@ 0x2e\n+\tldrh\tr6, [r6, #46]\t@ 0x2e\n \tmovs\tr1, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::vector >::dbgseq_t, std::allocator >::dbgseq_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tvpush\t{d8}\n@@ -155572,15 +155573,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t566f6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x229be>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (56728 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x229f0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr6, #48\t@ 0x30\n+\tcmp\tr6, #60\t@ 0x3c\n \tmovs\tr1, r7\n std::vector >::hashstatnode_t, std::allocator >::hashstatnode_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t56882 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x22b4a>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -156113,15 +156114,15 @@\n \tmovw\tr5, #65528\t@ 0xfff8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t56bf0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x22eb8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (56c18 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x22ee0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tcmp\tr1, #62\t@ 0x3e\n+\tcmp\tr1, #74\t@ 0x4a\n \tmovs\tr1, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_populateHashStatNodes():\n ./src/mira/hashstats_sdbg.C:87\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n@@ -156537,31 +156538,31 @@\n \tlsls\tr5, r0, #1\n \tstr\tr4, [r5, #48]\t@ 0x30\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr2, [r5, #16]\n+\tstrh\tr6, [r6, #16]\n \tmovs\tr1, r7\n-\tstr\tr7, [sp, #344]\t@ 0x158\n+\tstr\tr7, [sp, #376]\t@ 0x178\n \tmovs\tr2, r7\n-\tldr\tr1, [pc, #792]\t@ (572e4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x235ac>)\n+\tldr\tr1, [pc, #824]\t@ (57304 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x235cc>)\n \tmovs\tr3, r7\n-\tstrh\tr2, [r1, #10]\n+\tstrh\tr6, [r2, #10]\n \tmovs\tr1, r7\n-\tstrh\tr4, [r6, #6]\n+\tstrh\tr0, [r0, #8]\n \tmovs\tr1, r7\n-\tstr\tr5, [sp, #760]\t@ 0x2f8\n+\tstr\tr5, [sp, #792]\t@ 0x318\n \tmovs\tr2, r7\n-\tldr\tr0, [pc, #688]\t@ (5728c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x23554>)\n+\tldr\tr0, [pc, #720]\t@ (572ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x23574>)\n \tmovs\tr3, r7\n-\tstrh\tr2, [r6, #0]\n+\tstrh\tr6, [r7, #0]\n \tmovs\tr1, r7\n-\tldrb\tr2, [r3, #31]\n+\tldrb\tr6, [r4, #31]\n \tmovs\tr1, r7\n /usr/include/c++/10/bits/stl_vector.h:919\n \tsubs\tr0, r6, r3\n \tldr\tr2, [sp, #48]\t@ 0x30\n \tasrs\tr4, r0, #3\n ./src/mira/hashstats_sdbg.C:136\n \tldr\tr0, [sp, #24]\n@@ -157370,33 +157371,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr0, [r6, #18]\n+\tldrb\tr4, [r7, #18]\n \tmovs\tr1, r7\n-\tldrb\tr4, [r4, #18]\n+\tldrb\tr0, [r6, #18]\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #16\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tldrh\tr2, [r3, r7]\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr2, [r0, #10]\n+\tldrb\tr6, [r1, #10]\n \tmovs\tr1, r7\n-\tldrb\tr6, [r5, #10]\n+\tldrb\tr2, [r7, #10]\n \tmovs\tr1, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::vector >::dbgseq_t, std::allocator >::dbgseq_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tvpush\t{d8}\n@@ -157856,15 +157857,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t57a56 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x23d1e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (57a88 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x23d50>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tsubs\tr0, r2, r3\n+\tsubs\tr4, r3, r3\n \tmovs\tr1, r7\n std::vector >::hashstatnode_t, std::allocator >::hashstatnode_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t57be2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x23eaa>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -158397,15 +158398,15 @@\n \tmovw\tr5, #65528\t@ 0xfff8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t57f50 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x24218>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (57f78 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x24240>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tasrs\tr6, r3, #23\n+\tasrs\tr2, r5, #23\n \tmovs\tr1, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_populateHashStatNodes():\n ./src/mira/hashstats_sdbg.C:87\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r0\n@@ -158847,31 +158848,31 @@\n \tlsls\tr5, r0, #1\n \tldr\tr7, [pc, #808]\t@ (58678 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x24940>)\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [r6, #100]\t@ 0x64\n+\tldr\tr0, [r0, #104]\t@ 0x68\n \tmovs\tr1, r7\n-\tstrh\tr6, [r5, #28]\n+\tstrh\tr6, [r6, #28]\n \tmovs\tr2, r7\n-\tadds\tr6, #36\t@ 0x24\n+\tadds\tr6, #44\t@ 0x2c\n \tmovs\tr3, r7\n-\tldr\tr2, [r5, #88]\t@ 0x58\n+\tldr\tr6, [r6, #88]\t@ 0x58\n \tmovs\tr1, r7\n-\tldr\tr4, [r2, #84]\t@ 0x54\n+\tldr\tr0, [r4, #84]\t@ 0x54\n \tmovs\tr1, r7\n-\tstrh\tr0, [r5, #16]\n+\tstrh\tr0, [r6, #16]\n \tmovs\tr2, r7\n-\tadds\tr5, #22\n+\tadds\tr5, #30\n \tmovs\tr3, r7\n-\tldr\tr4, [r3, #72]\t@ 0x48\n+\tldr\tr0, [r5, #72]\t@ 0x48\n \tmovs\tr1, r7\n-\tldr\tr4, [r0, #68]\t@ 0x44\n+\tldr\tr0, [r2, #68]\t@ 0x44\n \tmovs\tr1, r7\n /usr/include/c++/10/bits/stl_vector.h:919\n \tsubs\tr4, r5, r3\n \tldr\tr0, [sp, #56]\t@ 0x38\n ./src/mira/hashstats_sdbg.C:136\n \tldr\tr2, [sp, #24]\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -159764,33 +159765,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [r2, #4]\n+\tldr\tr6, [r3, #4]\n \tmovs\tr1, r7\n-\tldr\tr6, [r0, #4]\n+\tldr\tr2, [r2, #4]\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #3\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tbxns\tpc\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr6, [r3, #96]\t@ 0x60\n+\tstr\tr2, [r5, #96]\t@ 0x60\n \tmovs\tr1, r7\n-\tstr\tr2, [r1, #100]\t@ 0x64\n+\tstr\tr6, [r2, #100]\t@ 0x64\n \tmovs\tr1, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::vector >::dbgseq_t, std::allocator >::dbgseq_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tvpush\t{d8}\n@@ -160250,15 +160251,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t58ea6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2516e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (58ed8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x251a0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tlsls\tr0, r0, #26\n+\tlsls\tr4, r1, #26\n \tmovs\tr1, r7\n void std::vector::dbgedits_t, std::allocator::dbgedits_t> >::_M_realloc_insert::dbgedits_t>(__gnu_cxx::__normal_iterator::dbgedits_t*, std::vector::dbgedits_t, std::allocator::dbgedits_t> > >, HashStatistics::dbgedits_t&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #4227858432\t@ 0xfc000000\n@@ -160494,15 +160495,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1012\n \tmov\tr5, r3\n \tb.n\t58fcc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x25294>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (59094 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2535c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tblt.n\t58fc4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2528c>\n+\tblt.n\t58fdc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x252a4>\n \tmovs\tr0, r7\n HashStatistics::proposeSDBGEditsForSequence(void const*, unsigned long long, char const*, std::vector::dbgedits_t, std::allocator::dbgedits_t> >&):\n ./src/mira/hashstats_sdbg.C:521\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n \tldr\tr5, [pc, #728]\t@ (59378 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x25640>)\n \tldr\tr4, [pc, #728]\t@ (5937c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x25644>)\n@@ -161302,39 +161303,39 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t59616 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x258de>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr2, [r7, r5]\n+\tldrh\tr6, [r0, r6]\n \tmovs\tr1, r7\n-\tldrh\tr4, [r5, r5]\n+\tldrh\tr0, [r7, r5]\n \tmovs\tr1, r7\n-\tldrh\tr4, [r4, r5]\n+\tldrh\tr0, [r6, r5]\n \tmovs\tr1, r7\n-\tldrh\tr0, [r4, r5]\n+\tldrh\tr4, [r5, r5]\n \tmovs\tr1, r7\n \tldmia\tr1!, {r2, r3, r4, r5, r7}\n \tmovs\tr0, r7\n-\tldrh\tr4, [r7, r3]\n+\tldrh\tr0, [r1, r4]\n \tmovs\tr1, r7\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr6, [r0, r7]\n+\tldr\tr2, [r2, r7]\n \tmovs\tr1, r7\n-\tldr\tr6, [r2, r7]\n+\tldr\tr2, [r4, r7]\n \tmovs\tr1, r7\n \tlsrs\tr4, r0, #26\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -161578,15 +161579,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1012\n \tmov\tr5, r3\n \tb.n\t59768 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x25a30>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (59830 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x25af8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tbcc.n\t59828 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x25af0>\n+\tbmi.n\t59840 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x25b08>\n \tmovs\tr0, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::proposeSDBGEditsForSequence(void const*, unsigned long long, char const*, std::vector >::dbgedits_t, std::allocator >::dbgedits_t> >&):\n ./src/mira/hashstats_sdbg.C:521\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n@@ -162475,39 +162476,39 @@\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t59ea4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2616c>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr2, [r7, r3]\n+\tstrh\tr6, [r0, r4]\n \tmovs\tr1, r7\n-\tstrh\tr2, [r5, r3]\n+\tstrh\tr6, [r6, r3]\n \tmovs\tr1, r7\n-\tstrh\tr2, [r4, r3]\n+\tstrh\tr6, [r5, r3]\n \tmovs\tr1, r7\n-\tstrh\tr6, [r3, r3]\n+\tstrh\tr2, [r5, r3]\n \tmovs\tr1, r7\n \tstmia\tr1!, {r3, r4, r5}\n \tmovs\tr0, r7\n-\tstrh\tr0, [r7, r1]\n+\tstrh\tr4, [r0, r2]\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr0, [r7, r4]\n+\tstr\tr4, [r0, r5]\n \tmovs\tr1, r7\n-\tstr\tr0, [r1, r5]\n+\tstr\tr4, [r2, r5]\n \tmovs\tr1, r7\n \tlsrs\tr0, r1, #26\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -162751,15 +162752,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1012\n \tmov\tr5, r3\n \tb.n\t59ff8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x262c0>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (5a0c0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26388>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldmia\tr3, {r1, r3, r5, r6}\n+\tldmia\tr3!, {r1, r2, r4, r5, r6}\n \tmovs\tr0, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::proposeSDBGEditsForSequence(void const*, unsigned long long, char const*, std::vector >::dbgedits_t, std::allocator >::dbgedits_t> >&):\n ./src/mira/hashstats_sdbg.C:521\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n@@ -163761,39 +163762,39 @@\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t5a830 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26af8>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #416]\t@ (5a9f4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26cbc>)\n+\tldr\tr1, [pc, #464]\t@ (5aa24 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26cec>)\n \tmovs\tr1, r7\n-\tldr\tr1, [pc, #352]\t@ (5a9b8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26c80>)\n+\tldr\tr1, [pc, #400]\t@ (5a9e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26cb0>)\n \tmovs\tr1, r7\n-\tldr\tr1, [pc, #320]\t@ (5a99c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26c64>)\n+\tldr\tr1, [pc, #368]\t@ (5a9cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26c94>)\n \tmovs\tr1, r7\n-\tldr\tr1, [pc, #304]\t@ (5a990 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26c58>)\n+\tldr\tr1, [pc, #352]\t@ (5a9c0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26c88>)\n \tmovs\tr1, r7\n \t\t\t@ instruction: 0xb7a6\n \tmovs\tr0, r7\n-\tldr\tr0, [pc, #920]\t@ (5ac00 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26ec8>)\n+\tldr\tr0, [pc, #968]\t@ (5ac30 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26ef8>)\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0x47aa\n+\t\t\t@ instruction: 0x47b6\n \tmovs\tr1, r7\n-\t\t\t@ instruction: 0x47ba\n+\t\t\t@ instruction: 0x47c6\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -164037,15 +164038,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1012\n \tmov\tr5, r3\n \tb.n\t5a984 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26c4c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (5aa4c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x26d14>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstmia\tr1!, {r1, r2, r3, r4, r6, r7}\n+\tstmia\tr1!, {r1, r3, r5, r6, r7}\n \tmovs\tr0, r7\n HashStatistics >::proposeSDBGEditsForSequence(void const*, unsigned long long, char const*, std::vector >::dbgedits_t, std::allocator >::dbgedits_t> >&):\n ./src/mira/hashstats_sdbg.C:521\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #1208]\t@ 5af10 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x271d8>\n \tldr.w\tr4, [pc, #1208]\t@ 5af14 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x271dc>\n \tadd\tr5, pc\n@@ -165225,39 +165226,39 @@\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t5b30c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x275d4>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr6, #148\t@ 0x94\n+\tsubs\tr6, #160\t@ 0xa0\n \tmovs\tr1, r7\n-\tsubs\tr6, #132\t@ 0x84\n+\tsubs\tr6, #144\t@ 0x90\n \tmovs\tr1, r7\n-\tsubs\tr6, #124\t@ 0x7c\n+\tsubs\tr6, #136\t@ 0x88\n \tmovs\tr1, r7\n-\tsubs\tr6, #120\t@ 0x78\n+\tsubs\tr6, #132\t@ 0x84\n \tmovs\tr1, r7\n \tadd\tr4, sp, #840\t@ 0x348\n \tmovs\tr0, r7\n-\tsubs\tr6, #18\n+\tsubs\tr6, #30\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr4, #210\t@ 0xd2\n+\tsubs\tr4, #222\t@ 0xde\n \tmovs\tr1, r7\n-\tsubs\tr4, #226\t@ 0xe2\n+\tsubs\tr4, #238\t@ 0xee\n \tmovs\tr1, r7\n \tlsrs\tr0, r5, #8\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -165638,15 +165639,15 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/deque.tcc:920 (discriminator 2)\n \tb.n\t5b5f8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x278c0>\n /usr/include/c++/10/bits/deque.tcc:918\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tsubs\tr2, #16\n+\tsubs\tr2, #28\n \tmovs\tr1, r7\n std::deque, std::allocator >, std::allocator, std::allocator > > >::resize(unsigned int):\n /usr/include/c++/10/bits/stl_deque.h:1249\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/stl_deque.h:357\n \tldr\tr4, [r0, #16]\n@@ -167065,34 +167066,34 @@\n \tlsls\tr5, r0, #1\n \tasrs\tr6, r7, #16\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr2, #112\t@ 0x70\n+\tadds\tr2, #124\t@ 0x7c\n \tmovs\tr1, r7\n-\tmov\tlr, sp\n+\tmov\tlr, lr\n \tmovs\tr2, r7\n-\tldr??.w\tr0, [r8, #58]\t@ 0x3a\n-\tadds\tr1, #94\t@ 0x5e\n+\tvld1.8\t\t\t@ instruction: 0xf9e0003a\n+\tadds\tr1, #106\t@ 0x6a\n \tmovs\tr1, r7\n-\tadds\tr3, #176\t@ 0xb0\n+\tadds\tr3, #188\t@ 0xbc\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr0, #18\n+\tadds\tr0, #30\n \tmovs\tr1, r7\n \tlsls\tr4, r5, #21\n \tmovs\tr0, r0\n \tcmp\tr0, r1\n \tbeq.n\t5c134 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x283fc>\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr\tr1, [sp, #168]\t@ 0xa8\n@@ -168723,56 +168724,56 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tcmp\tr5, #146\t@ 0x92\n+\tcmp\tr5, #158\t@ 0x9e\n \tmovs\tr1, r7\n-\tcmp\tr7, #112\t@ 0x70\n+\tcmp\tr7, #124\t@ 0x7c\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr2, #84\t@ 0x54\n+\tcmp\tr2, #96\t@ 0x60\n \tmovs\tr1, r7\n-\tcmp\tr2, #50\t@ 0x32\n+\tcmp\tr2, #62\t@ 0x3e\n \tmovs\tr1, r7\n \tlsls\tr4, r5, #21\n \tmovs\tr0, r0\n-\tcmp\tr0, #88\t@ 0x58\n+\tcmp\tr0, #100\t@ 0x64\n \tmovs\tr1, r7\n-\tmovs\tr7, #106\t@ 0x6a\n+\tmovs\tr7, #118\t@ 0x76\n \tmovs\tr1, r7\n-\tsubs\tr1, #246\t@ 0xf6\n+\tsubs\tr1, #254\t@ 0xfe\n \tmovs\tr2, r7\n-\tstcl\t0, cr0, [r4], #232\t@ 0xe8\n-\tmovs\tr4, #106\t@ 0x6a\n+\tstcl\t0, cr0, [ip], #232\t@ 0xe8\n+\tmovs\tr4, #118\t@ 0x76\n \tmovs\tr1, r7\n \tlsls\tr4, r0, #15\n \tlsls\tr5, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr3, #162\t@ 0xa2\n+\tmovs\tr3, #174\t@ 0xae\n \tmovs\tr1, r7\n-\tmovs\tr3, #252\t@ 0xfc\n+\tmovs\tr4, #8\n \tmovs\tr1, r7\n-\tldr\tr7, [sp, #152]\t@ 0x98\n+\tldr\tr7, [sp, #200]\t@ 0xc8\n \tmovs\tr0, r7\n-\tldr\tr7, [sp, #120]\t@ 0x78\n+\tldr\tr7, [sp, #168]\t@ 0xa8\n \tmovs\tr0, r7\n /usr/include/c++/10/bits/basic_ios.h:282\n \tmov\tr0, r7\n \tadd.w\tr3, r9, #8\n \tstr\tr3, [sp, #248]\t@ 0xf8\n \tblx\tb844 \n /usr/include/c++/10/bits/stl_vector.h:680\n@@ -169068,17 +169069,17 @@\n \tb.n\t5cf56 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2921e>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tlsls\tr6, r3, #1\n \tlsls\tr5, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr1, #214\t@ 0xd6\n+\tmovs\tr1, #226\t@ 0xe2\n \tmovs\tr1, r7\n-\tmovs\tr1, #204\t@ 0xcc\n+\tmovs\tr1, #216\t@ 0xd8\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_assignGraphIDsMakeSeqsAndCollectStats():\n ./src/mira/hashstats_sdbg.C:217\n@@ -169854,33 +169855,33 @@\n \teors\tr1, r3\n \tvhadd.u\tq8, q7, q2\n \tvhadd.u\tq8, q3, q2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr0, r4, #6\n+\tadds\tr4, r5, #6\n \tmovs\tr1, r7\n-\tadds\tr2, #32\n+\tadds\tr2, #40\t@ 0x28\n \tmovs\tr2, r7\n-\tb.n\t5cfc8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x29290>\n+\tb.n\t5cfd8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x292a0>\n \tmovs\tr2, r7\n-\tadds\tr4, r1, #2\n+\tadds\tr0, r3, #2\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr4, r4, r6\n+\tsubs\tr0, r6, r6\n \tmovs\tr1, r7\n \tasrs\tr4, r1, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -171461,58 +171462,58 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tnop.w\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tadds\tr2, r4, r4\n+\tadds\tr6, r5, r4\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr2, r4, #25\n+\tasrs\tr6, r5, #25\n \tmovs\tr1, r7\n-\tasrs\tr6, r6, #24\n+\tasrs\tr2, r0, #25\n \tmovs\tr1, r7\n \tasrs\tr4, r1, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tasrs\tr0, r4, #17\n+\tasrs\tr4, r5, #17\n \tmovs\tr1, r7\n-\tasrs\tr0, r7, #13\n+\tasrs\tr4, r0, #14\n \tmovs\tr1, r7\n-\tmovs\tr5, #240\t@ 0xf0\n+\tmovs\tr5, #248\t@ 0xf8\n \tmovs\tr2, r7\n-\tbhi.n\t5e174 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2a43c>\n+\tbhi.n\t5e184 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2a44c>\n \tmovs\tr2, r7\n-\tasrs\tr4, r4, #1\n+\tasrs\tr0, r6, #1\n \tmovs\tr1, r7\n \tvext.8\tq0, q7, q2, #0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr4, r3, #30\n+\tlsrs\tr0, r5, #30\n \tmovs\tr1, r7\n-\tlsrs\tr4, r7, #31\n+\tasrs\tr0, r1, #32\n \tmovs\tr1, r7\n-\tldrh\tr6, [r4, #24]\n+\tldrh\tr2, [r6, #24]\n \tmovs\tr0, r7\n-\tldrh\tr6, [r3, #24]\n+\tldrh\tr2, [r5, #24]\n \tmovs\tr0, r7\n ./src/mira/hashstats_sdbg.C:311 (discriminator 14)\n \tldr\tr0, [sp, #8]\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n \tb.n\t5e140 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2a408>\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #200]\t@ 0xc8\n@@ -171807,17 +171808,17 @@\n \tmov\tr1, r0\n \tb.n\t5e392 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2a65a>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tstc\t0, cr0, [r2], #-272\t@ 0xfffffef0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr2, r3, #22\n+\tlsrs\tr6, r4, #22\n \tmovs\tr1, r7\n-\tlsrs\tr0, r2, #22\n+\tlsrs\tr4, r3, #22\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_assignGraphIDsMakeSeqsAndCollectStats():\n ./src/mira/hashstats_sdbg.C:217\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -172584,33 +172585,33 @@\n \teors\tr1, r3\n \tadc.w\tr0, r6, r4, lsl #1\n \t\t\t@ instruction: 0xeb3e0044\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr0, r5, #5\n+\tlsrs\tr4, r6, #5\n \tmovs\tr1, r7\n-\tadds\tr0, r5, #7\n+\tadds\tr0, r6, #7\n \tmovs\tr2, r7\n-\tbeq.n\t5e990 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2ac58>\n+\tbeq.n\t5e9a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2ac68>\n \tmovs\tr2, r7\n-\tlsrs\tr4, r2, #1\n+\tlsrs\tr0, r4, #1\n \tmovs\tr1, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr4, r3, #29\n+\tlsls\tr0, r5, #29\n \tmovs\tr1, r7\n \tlsrs\tr0, r1, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -174200,54 +174201,54 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tblx\tb310 \n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tlsls\tr4, r3, #19\n+\tlsls\tr0, r5, #19\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr2, r0, #8\n+\tlsls\tr6, r1, #8\n \tmovs\tr1, r7\n-\tlsls\tr6, r0, #7\n+\tlsls\tr2, r2, #7\n \tmovs\tr1, r7\n \tlsrs\tr0, r1, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tvshr.u16\td16, d24, #14\n-\tmcr2\t0, 7, r0, cr6, cr8, {1}\n-\tasrs\tr2, r2, #5\n+\tvshr.u16\td16, d24, #2\n+\tmrc2\t0, 7, r0, cr2, cr8, {1}\n+\tasrs\tr2, r3, #5\n \tmovs\tr2, r7\n-\tstmia\tr4!, {r6}\n+\tstmia\tr4!, {r3, r6}\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xfbc60038\n+\t\t\t@ instruction: 0xfbd20038\n \tblt.n\t5f664 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2b92c>\n \tlsls\tr4, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfafc0038\n-\t\t\t@ instruction: 0xfb580038\n-\tstrb\tr2, [r0, #26]\n+\t\t\t@ instruction: 0xfb080038\n+\t\t\t@ instruction: 0xfb640038\n+\tstrb\tr6, [r1, #26]\n \tmovs\tr0, r7\n-\tstrb\tr2, [r7, #25]\n+\tstrb\tr6, [r0, #26]\n \tmovs\tr0, r7\n /usr/include/c++/10/bits/basic_ios.h:282\n \tmov\tr0, r5\n \tadd.w\tr3, r9, #8\n \tstr\tr3, [sp, #336]\t@ 0x150\n \tblx\tb844 \n /usr/include/c++/10/bits/stl_vector.h:680\n@@ -174533,16 +174534,16 @@\n \tb.n\t5f7ce , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2ba96>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tbvc.n\t5f7f8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2bac0>\n \tlsls\tr4, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr??.w\tr0, [lr, r8, lsl #3]\n-\tldr??.w\tr0, [r4, r8, lsl #3]\n+\tvld4.8\t{d16-d19}, [sl :256], r8\n+\tvld4.8\t{d16-d19}, [r0 :256], r8\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_sdbg_assignGraphIDsMakeSeqsAndCollectStats():\n ./src/mira/hashstats_sdbg.C:217\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -175315,25 +175316,25 @@\n \tlsls\tr4, r0, #1\n \tbvs.n\t5fe78 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2c140>\n \tlsls\tr4, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf5220038\n-\tlsrs\tr6, r1, #6\n+\t\t\t@ instruction: 0xf52e0038\n+\tlsrs\tr6, r2, #6\n \tmovs\tr2, r7\n-\tpop\t{r2, r3, r4, r5, r6}\n+\tpop\t{r2, r7}\n \tmovs\tr2, r7\n-\t\t\t@ instruction: 0xf3820038\n-\tlsls\tr4, r6, #27\n+\t\t\t@ instruction: 0xf38e0038\n+\tlsls\tr4, r7, #27\n \tmovs\tr2, r7\n-\tcbnz\tr2, 5fed8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2c1a0>\n+\tcbnz\tr2, 5feda , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2c1a2>\n \tmovs\tr2, r7\n-\tsbc.w\tr0, r8, #56\t@ 0x38\n+\tsbcs.w\tr0, r4, #56\t@ 0x38\n \tldr\tr2, [sp, #56]\t@ 0x38\n \tadds\tr6, #24\n \tadds\tr5, #24\n \tcmp\tr2, r6\n \tbne.w\t5f94c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2bc14>\n \tb.n\t5f968 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2bc30>\n /usr/include/c++/10/ostream:611\n@@ -176975,45 +176976,45 @@\n \tldrsb.w\tr4, [sp, #60]\t@ 0x3c\n \tb.w\t5fdee , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2c0b6>\n \tnop\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\t\t\t@ instruction: 0xf0a20038\n+\t\t\t@ instruction: 0xf0ae0038\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldc\t0, cr0, [sl, #224]!\t@ 0xe0\n-\tldcl\t0, cr0, [r6, #-224]\t@ 0xffffff20\n+\tstcl\t0, cr0, [r6, #224]\t@ 0xe0\n+\tstcl\t0, cr0, [r2, #-224]!\t@ 0xffffff20\n \tlsrs\tr0, r1, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xeb3e0038\n-\torrs.w\tr0, r2, r8, rrx\n-\t\t\t@ instruction: 0xe82e0038\n+\tadc.w\tr0, sl, r8, rrx\n+\torrs.w\tr0, lr, r8, rrx\n+\t\t\t@ instruction: 0xe83a0038\n \tstmia\tr5!, {r2, r6, r7}\n \tlsls\tr4, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tb.n\t606b0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2c978>\n+\tb.n\t606c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2c990>\n \tmovs\tr0, r7\n-\tb.n\t60740 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2ca08>\n+\tb.n\t60758 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2ca20>\n \tmovs\tr0, r7\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n ./src/mira/hashstats_sdbg.C:331\n \tblx\tb2d4 <__stack_chk_fail@plt>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n@@ -177215,17 +177216,17 @@\n \tb.n\t60c82 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2cf4a>\n \tb.n\t60ba4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2ce6c>\n \tb.n\t60bc2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2ce8a>\n /usr/include/c++/10/bits/basic_ios.h:282\n \tb.n\t60c98 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2cf60>\n \tb.n\t60c98 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2cf60>\n \tnop\n-\tstr\tr6, [r6, #8]\n+\tstr\tr2, [r0, #12]\n \tmovs\tr0, r7\n-\tstr\tr6, [r5, #8]\n+\tstr\tr2, [r7, #8]\n \tmovs\tr0, r7\n HashStatistics >::buildSDBGraphs():\n ./src/mira/hashstats_sdbg.C:400\n \tpush\t{r3, r4, r5, r6, r7, lr}\n /usr/include/c++/10/ostream:611\n \tmovs\tr2, #40\t@ 0x28\n ./src/mira/hashstats_sdbg.C:400\n@@ -177328,17 +177329,17 @@\n \tb.n\t60d56 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d01e>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tstmia\tr2!, {r1, r2, r3, r4, r6}\n \tlsls\tr4, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t61568 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d830>\n+\tb.n\t61580 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d848>\n \tmovs\tr0, r7\n-\tb.n\t61558 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d820>\n+\tb.n\t61570 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d838>\n \tmovs\tr0, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n void __gnu_parallel::parallel_sort_mwms::dbgseq_t*, std::vector::dbgseq_t, std::allocator::dbgseq_t> > >, bool (*)(HashStatistics::dbgseq_t const&, HashStatistics::dbgseq_t const&)>(__gnu_cxx::__normal_iterator::dbgseq_t*, std::vector::dbgseq_t, std::allocator::dbgseq_t> > >, __gnu_cxx::__normal_iterator::dbgseq_t*, std::vector::dbgseq_t, std::allocator::dbgseq_t> > >, bool (*)(HashStatistics::dbgseq_t const&, HashStatistics::dbgseq_t const&), unsigned short):\n /usr/include/c++/10/parallel/multiway_mergesort.h:395\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1205\n@@ -178306,15 +178307,15 @@\n \tmovw\tr8, #65528\t@ 0xfff8\n \tmovt\tr8, #32767\t@ 0x7fff\n \tb.n\t6138c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d654>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (614f4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d7bc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrh\tr2, [r4, #2]\n+\tstrh\tr6, [r5, #2]\n \tmovs\tr0, r7\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator::dbgseq_t*, std::vector::dbgseq_t, std::allocator::dbgseq_t> > >, __gnu_cxx::__ops::_Val_comp_iter::dbgseq_t const&, HashStatistics::dbgseq_t const&)> >(__gnu_cxx::__normal_iterator::dbgseq_t*, std::vector::dbgseq_t, std::allocator::dbgseq_t> > >, __gnu_cxx::__ops::_Val_comp_iter::dbgseq_t const&, HashStatistics::dbgseq_t const&)>):\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tldr\tr2, [pc, #148]\t@ (61590 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x2d858>)\n /usr/include/c++/10/bits/stl_algo.h:1823\n \tmov\tip, r0\n /usr/include/c++/10/bits/stl_algo.h:1819\n@@ -184405,15 +184406,15 @@\n \tmovw\tr7, #65504\t@ 0xffe0\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t646ce , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x30996>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (6476c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x30a34>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tmovs\tr4, #190\t@ 0xbe\n+\tmovs\tr4, #202\t@ 0xca\n \tmovs\tr0, r7\n void std::__push_heap<__gnu_cxx::__normal_iterator::dbgseq_t, int>*, std::vector::dbgseq_t, int>, std::allocator::dbgseq_t, int> > > >, int, std::pair::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse::dbgseq_t, int, bool (*)(HashStatistics::dbgseq_t const&, HashStatistics::dbgseq_t const&)> > >(__gnu_cxx::__normal_iterator::dbgseq_t, int>*, std::vector::dbgseq_t, int>, std::allocator::dbgseq_t, int> > > >, int, int, std::pair::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse::dbgseq_t, int, bool (*)(HashStatistics::dbgseq_t const&, HashStatistics::dbgseq_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tadd.w\tfp, r1, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -185028,15 +185029,15 @@\n \tmovw\tr7, #65504\t@ 0xffe0\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t64bda , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x30ea2>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (64c78 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x30f40>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tsubs\tr2, r6, #6\n+\tsubs\tr6, r7, #6\n \tmovs\tr0, r7\n void std::__push_heap<__gnu_cxx::__normal_iterator >::dbgseq_t, int>*, std::vector >::dbgseq_t, int>, std::allocator >::dbgseq_t, int> > > >, int, std::pair >::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::dbgseq_t, int, bool (*)(HashStatistics >::dbgseq_t const&, HashStatistics >::dbgseq_t const&)> > >(__gnu_cxx::__normal_iterator >::dbgseq_t, int>*, std::vector >::dbgseq_t, int>, std::allocator >::dbgseq_t, int> > > >, int, int, std::pair >::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::dbgseq_t, int, bool (*)(HashStatistics >::dbgseq_t const&, HashStatistics >::dbgseq_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tadd.w\tfp, r1, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -185651,15 +185652,15 @@\n \tmovw\tr7, #65504\t@ 0xffe0\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t650e6 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x313ae>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (65184 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x3144c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tsubs\tr6, r4, r2\n+\tsubs\tr2, r6, r2\n \tmovs\tr0, r7\n void std::__push_heap<__gnu_cxx::__normal_iterator >::dbgseq_t, int>*, std::vector >::dbgseq_t, int>, std::allocator >::dbgseq_t, int> > > >, int, std::pair >::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::dbgseq_t, int, bool (*)(HashStatistics >::dbgseq_t const&, HashStatistics >::dbgseq_t const&)> > >(__gnu_cxx::__normal_iterator >::dbgseq_t, int>*, std::vector >::dbgseq_t, int>, std::allocator >::dbgseq_t, int> > > >, int, int, std::pair >::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::dbgseq_t, int, bool (*)(HashStatistics >::dbgseq_t const&, HashStatistics >::dbgseq_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tadd.w\tfp, r1, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -186274,15 +186275,15 @@\n \tmovw\tr7, #65504\t@ 0xffe0\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t655f2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x318ba>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (65690 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x31958>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tasrs\tr2, r3, #22\n+\tasrs\tr6, r4, #22\n \tmovs\tr0, r7\n void std::__push_heap<__gnu_cxx::__normal_iterator >::dbgseq_t, int>*, std::vector >::dbgseq_t, int>, std::allocator >::dbgseq_t, int> > > >, int, std::pair >::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::dbgseq_t, int, bool (*)(HashStatistics >::dbgseq_t const&, HashStatistics >::dbgseq_t const&)> > >(__gnu_cxx::__normal_iterator >::dbgseq_t, int>*, std::vector >::dbgseq_t, int>, std::allocator >::dbgseq_t, int> > > >, int, int, std::pair >::dbgseq_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::dbgseq_t, int, bool (*)(HashStatistics >::dbgseq_t const&, HashStatistics >::dbgseq_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tadd.w\tfp, r1, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -274621,17 +274622,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr6, r2, #5\n+\tlsls\tr2, r4, #5\n \tmovs\tr5, r6\n-\tlsls\tr4, r2, #5\n+\tlsls\tr0, r4, #5\n \tmovs\tr5, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -275231,19 +275232,19 @@\n \tmovs\tr2, #135\t@ 0x87\n \tldr\tr1, [pc, #16]\t@ (97054 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6331c>)\n \tldr\tr0, [pc, #16]\t@ (97058 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63320>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tstrh\tr6, [r0, #50]\t@ 0x32\n+\tstrh\tr2, [r2, #50]\t@ 0x32\n \tmovs\tr5, r6\n-\tadd\tr2, pc, #192\t@ (adr r2, 97118 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x633e0>)\n+\tadd\tr2, pc, #240\t@ (adr r2, 97148 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63410>)\n \tmovs\tr5, r6\n-\tstrh\tr6, [r3, #54]\t@ 0x36\n+\tstrh\tr2, [r5, #54]\t@ 0x36\n \tmovs\tr5, r6\n boost::basic_format, std::allocator >::basic_format(char const*) [clone .constprop.0] [clone .isra.0]:\n /usr/include/boost/format/format_implementation.hpp:28\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:193\n \tadd.w\tr1, r0, #56\t@ 0x38\n /usr/include/boost/format/format_implementation.hpp:28\n@@ -276250,25 +276251,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n \tldrh\tr2, [r4, r6]\n \tlsls\tr1, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstrh\tr4, [r5, #8]\n+\tstrh\tr0, [r7, #8]\n \tmovs\tr5, r6\n-\tstrh\tr6, [r5, #16]\n+\tstrh\tr2, [r7, #16]\n \tmovs\tr5, r6\n-\tstrh\tr4, [r2, #18]\n+\tstrh\tr0, [r4, #18]\n \tmovs\tr5, r6\n-\tstrh\tr6, [r0, #20]\n+\tstrh\tr2, [r2, #20]\n \tmovs\tr5, r6\n-\tstrh\tr0, [r3, #24]\n+\tstrh\tr4, [r4, #24]\n \tmovs\tr5, r6\n-\tstrh\tr6, [r7, #24]\n+\tstrh\tr2, [r1, #26]\n \tmovs\tr5, r6\n \tlsls\tr0, r4, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #11\n \tmovs\tr0, r0\n boost::detail::sp_counted_base::destroy():\n /usr/include/boost/smart_ptr/detail/sp_counted_base_gcc_atomic.hpp:99\n@@ -276302,39 +276303,39 @@\n \tbx\tlr\n boost::io::format_error::what() const:\n /usr/include/boost/format/exceptions.hpp:36\n \tldr\tr0, [pc, #4]\t@ (977d8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63aa0>)\n \tadd\tr0, pc\n \tbx\tlr\n \tnop\n-\tldrb\tr2, [r2, #14]\n+\tldrb\tr6, [r3, #14]\n \tmovs\tr5, r6\n boost::io::bad_format_string::what() const:\n /usr/include/boost/format/exceptions.hpp:49\n \tldr\tr0, [pc, #4]\t@ (977e4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63aac>)\n \tadd\tr0, pc\n \tbx\tlr\n \tnop\n-\tldrb\tr2, [r6, #14]\n+\tldrb\tr6, [r7, #14]\n \tmovs\tr5, r6\n boost::io::too_few_args::what() const:\n /usr/include/boost/format/exceptions.hpp:63\n \tldr\tr0, [pc, #4]\t@ (977f0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63ab8>)\n \tadd\tr0, pc\n \tbx\tlr\n \tnop\n-\tldrb\tr6, [r3, #15]\n+\tldrb\tr2, [r5, #15]\n \tmovs\tr5, r6\n boost::io::too_many_args::what() const:\n /usr/include/boost/format/exceptions.hpp:77\n \tldr\tr0, [pc, #4]\t@ (977fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63ac4>)\n \tadd\tr0, pc\n \tbx\tlr\n \tnop\n-\tldrb\tr2, [r4, #16]\n+\tldrb\tr6, [r5, #16]\n \tmovs\tr5, r6\n void boost::io::detail::call_put_head, unsigned int>(std::basic_ostream >&, void const*):\n /usr/include/boost/format/feed_args.hpp:122\n \tbx\tlr\n \tnop\n boost::detail::sp_counted_impl_pd, std::allocator >*, boost::io::basic_oaltstringstream, std::allocator >::No_Op>::~sp_counted_impl_pd():\n /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:143\n@@ -276923,24 +276924,24 @@\n \tmovs\tr2, #176\t@ 0xb0\n \tldr\tr1, [pc, #16]\t@ (97b88 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63e50>)\n \tldr\tr0, [pc, #16]\t@ (97b8c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63e54>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tldrb\tr2, [r6, #3]\n+\tldrb\tr6, [r7, #3]\n \tmovs\tr5, r6\n-\tldrb\tr0, [r0, #10]\n+\tldrb\tr4, [r1, #10]\n \tmovs\tr5, r6\n-\titte\tne\n-\tmovne\tr6, r6\n+\tittt\tcs\n+\tmovcs\tr6, r6\n boost::io::format_error::~format_error():\n /usr/include/boost/format/exceptions.hpp:29\n-\tldrne\tr3, [pc, #20]\t@ (97ba8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63e70>)\n-\tldreq\tr2, [pc, #24]\t@ (97bac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63e74>)\n+\tldrcs\tr3, [pc, #20]\t@ (97ba8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63e70>)\n+\tldrcs\tr2, [pc, #24]\t@ (97bac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x63e74>)\n \tadd\tr3, pc\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n \tldr\tr3, [r3, r2]\n \tadds\tr3, #8\n \tstr\tr3, [r0, #0]\n \tblx\tb098 \n@@ -281007,19 +281008,19 @@\n \tmovs\tr2, #70\t@ 0x46\n \tldr\tr1, [pc, #16]\t@ (998b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65b7c>)\n \tldr\tr0, [pc, #16]\t@ (998b8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65b80>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tldr\tr6, [r2, #96]\t@ 0x60\n+\tldr\tr2, [r4, #96]\t@ 0x60\n \tmovs\tr5, r6\n-\tsvc\t24\n+\tsvc\t36\t@ 0x24\n \tmovs\tr4, r6\n-\tldr\tr6, [r5, #96]\t@ 0x60\n+\tldr\tr2, [r7, #96]\t@ 0x60\n \tmovs\tr5, r6\n boost::condition_variable::~condition_variable():\n /usr/include/boost/thread/pthread/condition_variable_fwd.hpp:77\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n /usr/include/boost/thread/pthread/pthread_helpers.hpp:57\n \tmov\tr0, r4\n@@ -281056,25 +281057,25 @@\n \tmovs\tr2, #83\t@ 0x53\n \tldr\tr1, [pc, #28]\t@ (99914 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65bdc>)\n \tldr\tr0, [pc, #28]\t@ (99918 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65be0>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tldr\tr4, [r2, #96]\t@ 0x60\n+\tldr\tr0, [r4, #96]\t@ 0x60\n \tmovs\tr5, r6\n-\tldr\tr6, [r0, #100]\t@ 0x64\n+\tldr\tr2, [r2, #100]\t@ 0x64\n \tmovs\tr5, r6\n-\tldr\tr4, [r0, #104]\t@ 0x68\n+\tldr\tr0, [r2, #104]\t@ 0x68\n \tmovs\tr5, r6\n-\tldr\tr2, [r0, #96]\t@ 0x60\n+\tldr\tr6, [r1, #96]\t@ 0x60\n \tmovs\tr5, r6\n-\tldr\tr4, [r6, #96]\t@ 0x60\n+\tldr\tr0, [r0, #100]\t@ 0x64\n \tmovs\tr5, r6\n-\tldr\tr2, [r4, #104]\t@ 0x68\n+\tldr\tr6, [r5, #104]\t@ 0x68\n \tmovs\tr5, r6\n boost::thread_group::~thread_group():\n /usr/include/boost/thread/detail/thread_group.hpp:30\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tldr.w\tr8, [pc, #336]\t@ 99a74 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65d3c>\n /usr/include/c++/10/bits/stl_list.h:946\n@@ -281271,31 +281272,31 @@\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tadds\tr6, #56\t@ 0x38\n \tlsls\tr1, r0, #1\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tldr\tr6, [r6, #72]\t@ 0x48\n+\tldr\tr2, [r0, #76]\t@ 0x4c\n \tmovs\tr5, r6\n-\tldr\tr0, [r5, #76]\t@ 0x4c\n+\tldr\tr4, [r6, #76]\t@ 0x4c\n \tmovs\tr5, r6\n-\tldr\tr6, [r4, #80]\t@ 0x50\n+\tldr\tr2, [r6, #80]\t@ 0x50\n \tmovs\tr5, r6\n-\tldr\tr4, [r4, #72]\t@ 0x48\n+\tldr\tr0, [r6, #72]\t@ 0x48\n \tmovs\tr5, r6\n-\tldr\tr6, [r2, #76]\t@ 0x4c\n+\tldr\tr2, [r4, #76]\t@ 0x4c\n \tmovs\tr5, r6\n-\tldr\tr4, [r0, #84]\t@ 0x54\n+\tldr\tr0, [r2, #84]\t@ 0x54\n \tmovs\tr5, r6\n-\tble.n\t99b14 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65ddc>\n+\tble.n\t99b2c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65df4>\n \tmovs\tr4, r6\n-\tble.n\t99b44 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65e0c>\n+\tble.n\t99b5c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65e24>\n \tmovs\tr4, r6\n-\tble.n\t99b9c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65e64>\n+\tble.n\t999b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65c7c>\n \tmovs\tr4, r6\n HashStatistics::hash2string(unsigned long long, unsigned int, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/hashstats.C:288\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr6, r3\n \tmov\tr7, r2\n /usr/include/c++/10/bits/basic_string.h:187\n@@ -281974,15 +281975,15 @@\n ./src/mira/hashstats.C:1280\n \tmovw\tr0, #999\t@ 0x3e7\n \tblx\tbe10 \n \tcmp\tr7, #52\t@ 0x34\n \tlsls\tr1, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [r2, #120]\t@ 0x78\n+\tstr\tr0, [r4, #120]\t@ 0x78\n \tmovs\tr5, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics::HashStatistics():\n ./src/mira/hashstats.C:196\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n@@ -282604,29 +282605,29 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr4, #36\t@ 0x24\n \tlsls\tr1, r0, #1\n-\tstr\tr4, [r2, #72]\t@ 0x48\n+\tstr\tr0, [r4, #72]\t@ 0x48\n \tmovs\tr5, r6\n-\tstr\tr2, [r3, #72]\t@ 0x48\n+\tstr\tr6, [r4, #72]\t@ 0x48\n \tmovs\tr5, r6\n-\tstr\tr4, [r4, #72]\t@ 0x48\n+\tstr\tr0, [r6, #72]\t@ 0x48\n \tmovs\tr5, r6\n-\tstr\tr2, [r0, #64]\t@ 0x40\n+\tstr\tr6, [r1, #64]\t@ 0x40\n \tmovs\tr5, r6\n-\tstr\tr2, [r7, #60]\t@ 0x3c\n+\tstr\tr6, [r0, #64]\t@ 0x40\n \tmovs\tr5, r6\n-\tstr\tr0, [r6, #60]\t@ 0x3c\n+\tstr\tr4, [r7, #60]\t@ 0x3c\n \tmovs\tr5, r6\n-\tstr\tr0, [r4, #60]\t@ 0x3c\n+\tstr\tr4, [r5, #60]\t@ 0x3c\n \tmovs\tr5, r6\n-\tstr\tr6, [r1, #60]\t@ 0x3c\n+\tstr\tr2, [r3, #60]\t@ 0x3c\n \tmovs\tr5, r6\n \tcmp\tr2, #166\t@ 0xa6\n \tlsls\tr1, r0, #1\n HashStatistics::dumpAsFASTA(std::ostream&):\n ./src/mira/hashstats.C:3310\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_iterator.h:979\n@@ -282793,15 +282794,15 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr2, #46\t@ 0x2e\n \tlsls\tr1, r0, #1\n-\tbcs.n\t9a748 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x66a10>\n+\tbcs.n\t9a558 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x66820>\n \tmovs\tr6, r6\n \tcmp\tr1, #70\t@ 0x46\n \tlsls\tr1, r0, #1\n HashStatistics >::hash2string(VLuint<128u>, unsigned int, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/hashstats.C:288\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n@@ -283528,15 +283529,15 @@\n ./src/mira/hashstats.C:1280\n \tmovw\tr0, #999\t@ 0x3e7\n \tblx\tbe10 \n \tmovs\tr3, #136\t@ 0x88\n \tlsls\tr1, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr0, [r5, r7]\n+\tldrh\tr4, [r6, r7]\n \tmovs\tr5, r6\n HashStatistics >::HashStatistics():\n ./src/mira/hashstats.C:196\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr3, #0\n@@ -284177,31 +284178,31 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr0, #114\t@ 0x72\n \tlsls\tr1, r0, #1\n-\tldr\tr4, [r6, r3]\n+\tldr\tr0, [r0, r4]\n \tmovs\tr5, r6\n-\tldrh\tr0, [r0, #42]\t@ 0x2a\n+\tldrh\tr0, [r1, #42]\t@ 0x2a\n \tmovs\tr0, r7\n-\tldr\tr0, [r1, r1]\n+\tldr\tr4, [r2, r1]\n \tmovs\tr5, r6\n-\tldr\tr6, [r7, r0]\n+\tldr\tr2, [r1, r1]\n \tmovs\tr5, r6\n-\tldr\tr4, [r6, r0]\n+\tldr\tr0, [r0, r1]\n \tmovs\tr5, r6\n-\tldr\tr4, [r5, r0]\n+\tldr\tr0, [r7, r0]\n \tmovs\tr5, r6\n-\tldr\tr2, [r4, r0]\n+\tldr\tr6, [r5, r0]\n \tmovs\tr5, r6\n-\tldr\tr2, [r2, r0]\n+\tldr\tr6, [r3, r0]\n \tmovs\tr5, r6\n-\tldr\tr0, [r0, r0]\n+\tldr\tr4, [r1, r0]\n \tmovs\tr5, r6\n \tsubs\tr2, r3, #3\n \tlsls\tr1, r0, #1\n HashStatistics >::dumpAsFASTA(std::ostream&):\n ./src/mira/hashstats.C:3310\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n@@ -284364,15 +284365,15 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tsubs\tr0, r6, #1\n \tlsls\tr1, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r4, r5, r7}\n+\tstmia\tr6!, {r3, r4, r5, r7}\n \tmovs\tr6, r6\n \tadds\tr2, r6, #5\n \tlsls\tr1, r0, #1\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::hash2string(VLuint<256u>, unsigned int, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/hashstats.C:288\n@@ -285139,15 +285140,15 @@\n ./src/mira/hashstats.C:1280\n \tmovw\tr0, #999\t@ 0x3e7\n \tblx\tbe10 \n \tasrs\tr4, r5, #28\n \tlsls\tr1, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr7, [pc, #560]\t@ (9ba84 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x67d4c>)\n+\tldr\tr7, [pc, #608]\t@ (9bab4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x67d7c>)\n \tmovs\tr5, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::HashStatistics():\n ./src/mira/hashstats.C:196\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n@@ -285785,31 +285786,31 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr6, r0, #16\n \tlsls\tr1, r0, #1\n-\tldr\tr4, [pc, #544]\t@ (9bf5c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68224>)\n+\tldr\tr4, [pc, #592]\t@ (9bf8c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68254>)\n \tmovs\tr5, r6\n-\tstrh\tr4, [r2, #6]\n+\tstrh\tr4, [r3, #6]\n \tmovs\tr0, r7\n-\tldr\tr3, [pc, #824]\t@ (9c07c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68344>)\n+\tldr\tr3, [pc, #872]\t@ (9c0ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68374>)\n \tmovs\tr5, r6\n-\tldr\tr3, [pc, #784]\t@ (9c058 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68320>)\n+\tldr\tr3, [pc, #832]\t@ (9c088 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68350>)\n \tmovs\tr5, r6\n-\tldr\tr3, [pc, #744]\t@ (9c034 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x682fc>)\n+\tldr\tr3, [pc, #792]\t@ (9c064 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6832c>)\n \tmovs\tr5, r6\n-\tldr\tr3, [pc, #712]\t@ (9c018 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x682e0>)\n+\tldr\tr3, [pc, #760]\t@ (9c048 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68310>)\n \tmovs\tr5, r6\n-\tldr\tr3, [pc, #672]\t@ (9bff4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x682bc>)\n+\tldr\tr3, [pc, #720]\t@ (9c024 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x682ec>)\n \tmovs\tr5, r6\n-\tldr\tr3, [pc, #608]\t@ (9bfb8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x68280>)\n+\tldr\tr3, [pc, #656]\t@ (9bfe8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x682b0>)\n \tmovs\tr5, r6\n-\tldr\tr3, [pc, #536]\t@ (9bf74 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6823c>)\n+\tldr\tr3, [pc, #584]\t@ (9bfa4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6826c>)\n \tmovs\tr5, r6\n \tasrs\tr0, r4, #9\n \tlsls\tr1, r0, #1\n HashStatistics >::dumpAsFASTA(std::ostream&):\n ./src/mira/hashstats.C:3310\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n@@ -285975,15 +285976,15 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tasrs\tr4, r6, #7\n \tlsls\tr1, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\trev\tr4, r6\n+\trev\tr4, r7\n \tmovs\tr6, r6\n \tasrs\tr2, r5, #3\n \tlsls\tr1, r0, #1\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::hash2string(VLuint<512u>, unsigned int, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/hashstats.C:288\n@@ -286838,15 +286839,15 @@\n ./src/mira/hashstats.C:1280\n \tmovw\tr0, #999\t@ 0x3e7\n \tblx\tbe10 \n \tlsrs\tr0, r2, #6\n \tlsls\tr1, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\trors\tr0, r6\n+\trors\tr4, r7\n \tmovs\tr5, r6\n HashStatistics >::HashStatistics():\n ./src/mira/hashstats.C:196\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr3, #0\n@@ -287494,31 +287495,31 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr6, r2, #25\n \tlsls\tr1, r0, #1\n-\tsubs\tr6, #216\t@ 0xd8\n+\tsubs\tr6, #228\t@ 0xe4\n \tmovs\tr5, r6\n-\tstrb\tr4, [r4, #12]\n+\tstrb\tr4, [r5, #12]\n \tmovs\tr0, r7\n-\tsubs\tr6, #16\n+\tsubs\tr6, #28\n \tmovs\tr5, r6\n-\tsubs\tr6, #6\n+\tsubs\tr6, #18\n \tmovs\tr5, r6\n-\tsubs\tr5, #252\t@ 0xfc\n+\tsubs\tr6, #8\n \tmovs\tr5, r6\n-\tsubs\tr5, #244\t@ 0xf4\n+\tsubs\tr6, #0\n \tmovs\tr5, r6\n-\tsubs\tr5, #234\t@ 0xea\n+\tsubs\tr5, #246\t@ 0xf6\n \tmovs\tr5, r6\n-\tsubs\tr5, #218\t@ 0xda\n+\tsubs\tr5, #230\t@ 0xe6\n \tmovs\tr5, r6\n-\tsubs\tr5, #200\t@ 0xc8\n+\tsubs\tr5, #212\t@ 0xd4\n \tmovs\tr5, r6\n \tlsls\tr2, r4, #18\n \tlsls\tr1, r0, #1\n HashStatistics >::dumpAsFASTA(std::ostream&):\n ./src/mira/hashstats.C:3310\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n@@ -287688,15 +287689,15 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tlsls\tr0, r7, #16\n \tlsls\tr1, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #480\t@ 0x1e0\n+\tadd\tr4, sp, #512\t@ 0x200\n \tmovs\tr6, r6\n \tlsls\tr4, r3, #12\n \tlsls\tr1, r0, #1\n boost::system::system_error::system_error(boost::system::system_error const&):\n /usr/include/boost/system/system_error.hpp:22\n \tldr\tr2, [pc, #192]\t@ (9cd48 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x69010>)\n \tldr\tr3, [pc, #196]\t@ (9cd4c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x69014>)\n@@ -287979,41 +287980,41 @@\n \tb.n\t9ce70 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x69138>\n \tlsls\tr2, r7, #7\n \tlsls\tr1, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr4, r5, #7\n \tlsls\tr1, r0, #1\n-\tsubs\tr3, #188\t@ 0xbc\n+\tsubs\tr3, #200\t@ 0xc8\n \tmovs\tr5, r6\n-\tsubs\tr1, #134\t@ 0x86\n+\tsubs\tr1, #146\t@ 0x92\n \tmovs\tr5, r6\n-\tsubs\tr1, #196\t@ 0xc4\n+\tsubs\tr1, #208\t@ 0xd0\n \tmovs\tr5, r6\n \tlsls\tr4, r0, #6\n \tlsls\tr1, r0, #1\n-\tsubs\tr3, #154\t@ 0x9a\n+\tsubs\tr3, #166\t@ 0xa6\n \tmovs\tr5, r6\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tsubs\tr2, #28\n+\tsubs\tr2, #40\t@ 0x28\n \tmovs\tr5, r6\n-\tsubs\tr2, #92\t@ 0x5c\n+\tsubs\tr2, #104\t@ 0x68\n \tmovs\tr5, r6\n-\tsubs\tr2, #146\t@ 0x92\n+\tsubs\tr2, #158\t@ 0x9e\n \tmovs\tr5, r6\n-\tsubs\tr2, #200\t@ 0xc8\n+\tsubs\tr2, #212\t@ 0xd4\n \tmovs\tr5, r6\n-\tsubs\tr2, #74\t@ 0x4a\n+\tsubs\tr2, #86\t@ 0x56\n \tmovs\tr5, r6\n-\tsubs\tr2, #128\t@ 0x80\n+\tsubs\tr2, #140\t@ 0x8c\n \tmovs\tr5, r6\n-\tsubs\tr2, #222\t@ 0xde\n+\tsubs\tr2, #234\t@ 0xea\n \tmovs\tr5, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n boost::detail::interruption_checker::interruption_checker(pthread_mutex_t*, pthread_cond_t*):\n /usr/include/boost/thread/pthread/thread_data.hpp:206\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr8, r2\n@@ -288176,36 +288177,36 @@\n \tnop\n \tlsls\tr0, r1, #2\n \tlsls\tr1, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr6, r7, #1\n \tlsls\tr1, r0, #1\n-\tadds\tr7, #112\t@ 0x70\n+\tadds\tr7, #124\t@ 0x7c\n \tmovs\tr5, r6\n-\tadd\tr0, sp, #456\t@ 0x1c8\n+\tadd\tr0, sp, #504\t@ 0x1f8\n \tmovs\tr4, r6\n-\tadds\tr7, #136\t@ 0x88\n+\tadds\tr7, #148\t@ 0x94\n \tmovs\tr5, r6\n \tvmla.i\tq8, q3, d0[0]\n-\tsubs\tr2, #142\t@ 0x8e\n+\tsubs\tr2, #154\t@ 0x9a\n \tmovs\tr5, r6\n-\tsubs\tr2, #236\t@ 0xec\n+\tsubs\tr2, #248\t@ 0xf8\n \tmovs\tr5, r6\n-\tsubs\tr3, #30\n+\tsubs\tr3, #42\t@ 0x2a\n \tmovs\tr5, r6\n-\tsubs\tr2, #76\t@ 0x4c\n+\tsubs\tr2, #88\t@ 0x58\n \tmovs\tr5, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tsubs\tr2, #94\t@ 0x5e\n+\tsubs\tr2, #106\t@ 0x6a\n \tmovs\tr5, r6\n-\tsubs\tr2, #188\t@ 0xbc\n+\tsubs\tr2, #200\t@ 0xc8\n \tmovs\tr5, r6\n-\tsubs\tr2, #238\t@ 0xee\n+\tsubs\tr2, #250\t@ 0xfa\n \tmovs\tr5, r6\n \tlsrs\tr0, r4, #8\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n boost::shared_mutex::unlock():\n /usr/include/boost/thread/pthread/shared_mutex.hpp:349\n@@ -288423,65 +288424,65 @@\n \tbl\t28c58 \n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tvhadd.u16\tq0, q4, q0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvhadd.u8\tq0, q0, q0\n \tcdp2\t0, 7, cr0, cr2, cr0, {2}\n-\tsubs\tr2, #94\t@ 0x5e\n+\tsubs\tr2, #106\t@ 0x6a\n \tmovs\tr5, r6\n-\tsubs\tr2, #180\t@ 0xb4\n+\tsubs\tr2, #192\t@ 0xc0\n \tmovs\tr5, r6\n-\tsubs\tr1, #162\t@ 0xa2\n+\tsubs\tr1, #174\t@ 0xae\n \tmovs\tr5, r6\n-\tsubs\tr2, #228\t@ 0xe4\n+\tsubs\tr2, #240\t@ 0xf0\n \tmovs\tr5, r6\n-\tsubs\tr3, #18\n+\tsubs\tr3, #30\n \tmovs\tr5, r6\n-\tsubs\tr3, #76\t@ 0x4c\n+\tsubs\tr3, #88\t@ 0x58\n \tmovs\tr5, r6\n-\tsubs\tr1, #162\t@ 0xa2\n+\tsubs\tr1, #174\t@ 0xae\n \tmovs\tr5, r6\n-\tsubs\tr1, #220\t@ 0xdc\n+\tsubs\tr1, #232\t@ 0xe8\n \tmovs\tr5, r6\n-\tsubs\tr2, #42\t@ 0x2a\n+\tsubs\tr2, #54\t@ 0x36\n \tmovs\tr5, r6\n-\tsubs\tr1, #144\t@ 0x90\n+\tsubs\tr1, #156\t@ 0x9c\n \tmovs\tr5, r6\n-\tsubs\tr1, #202\t@ 0xca\n+\tsubs\tr1, #214\t@ 0xd6\n \tmovs\tr5, r6\n-\tsubs\tr2, #8\n+\tsubs\tr2, #20\n \tmovs\tr5, r6\n-\tsubs\tr1, #126\t@ 0x7e\n+\tsubs\tr1, #138\t@ 0x8a\n \tmovs\tr5, r6\n-\tsubs\tr1, #184\t@ 0xb8\n+\tsubs\tr1, #196\t@ 0xc4\n \tmovs\tr5, r6\n-\tsubs\tr1, #234\t@ 0xea\n+\tsubs\tr1, #246\t@ 0xf6\n \tmovs\tr5, r6\n-\tsubs\tr0, #136\t@ 0x88\n+\tsubs\tr0, #148\t@ 0x94\n \tmovs\tr5, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tsubs\tr3, #16\n+\tsubs\tr3, #28\n \tmovs\tr5, r6\n-\tsubs\tr2, #62\t@ 0x3e\n+\tsubs\tr2, #74\t@ 0x4a\n \tmovs\tr5, r6\n-\tmovs\tr4, #232\t@ 0xe8\n+\tmovs\tr4, #244\t@ 0xf4\n \tmovs\tr5, r6\n-\tadds\tr5, #42\t@ 0x2a\n+\tadds\tr5, #54\t@ 0x36\n \tmovs\tr5, r6\n-\tadd\tr6, pc, #176\t@ (adr r6, 9d2e0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x695a8>)\n+\tadd\tr6, pc, #224\t@ (adr r6, 9d310 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x695d8>)\n \tmovs\tr4, r6\n-\tadds\tr5, #66\t@ 0x42\n+\tadds\tr5, #78\t@ 0x4e\n \tmovs\tr5, r6\n-\tsubs\tr3, #36\t@ 0x24\n+\tsubs\tr3, #48\t@ 0x30\n \tmovs\tr5, r6\n-\tsubs\tr2, #134\t@ 0x86\n+\tsubs\tr2, #146\t@ 0x92\n \tmovs\tr5, r6\n-\tsubs\tr3, #80\t@ 0x50\n+\tsubs\tr3, #92\t@ 0x5c\n \tmovs\tr5, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n boost::shared_mutex::unlock_shared():\n /usr/include/boost/thread/pthread/shared_mutex.hpp:241\n \tldr\tr2, [pc, #424]\t@ (9d3f0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x696b8>)\n \tldr\tr3, [pc, #428]\t@ (9d3f4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x696bc>)\n@@ -288724,59 +288725,59 @@\n \tbl\t28c58 \n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldc2\t0, cr0, [r8, #-256]\t@ 0xffffff00\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstc2\t0, cr0, [r0, #-256]\t@ 0xffffff00\n \tstc2l\t0, cr0, [r2], #-256\t@ 0xffffff00\n-\tsubs\tr1, #72\t@ 0x48\n+\tsubs\tr1, #84\t@ 0x54\n \tmovs\tr5, r6\n-\tsubs\tr0, #118\t@ 0x76\n+\tsubs\tr0, #130\t@ 0x82\n \tmovs\tr5, r6\n-\tmovs\tr3, #32\n+\tmovs\tr3, #44\t@ 0x2c\n \tmovs\tr5, r6\n-\tsubs\tr0, #14\n+\tsubs\tr0, #26\n \tmovs\tr5, r6\n-\tsubs\tr0, #100\t@ 0x64\n+\tsubs\tr0, #112\t@ 0x70\n \tmovs\tr5, r6\n-\tadds\tr7, #82\t@ 0x52\n+\tadds\tr7, #94\t@ 0x5e\n \tmovs\tr5, r6\n-\tsubs\tr1, #96\t@ 0x60\n+\tsubs\tr1, #108\t@ 0x6c\n \tmovs\tr5, r6\n-\tsubs\tr0, #194\t@ 0xc2\n+\tsubs\tr0, #206\t@ 0xce\n \tmovs\tr5, r6\n-\tsubs\tr1, #140\t@ 0x8c\n+\tsubs\tr1, #152\t@ 0x98\n \tmovs\tr5, r6\n-\tadds\tr3, #62\t@ 0x3e\n+\tadds\tr3, #74\t@ 0x4a\n \tmovs\tr5, r6\n-\tadd\tr4, pc, #256\t@ (adr r4, 9d52c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x697f4>)\n+\tadd\tr4, pc, #304\t@ (adr r4, 9d55c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x69824>)\n \tmovs\tr4, r6\n-\tadds\tr3, #86\t@ 0x56\n+\tadds\tr3, #98\t@ 0x62\n \tmovs\tr5, r6\n-\tadds\tr6, #88\t@ 0x58\n+\tadds\tr6, #100\t@ 0x64\n \tmovs\tr5, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tsubs\tr1, #116\t@ 0x74\n+\tsubs\tr1, #128\t@ 0x80\n \tmovs\tr5, r6\n-\tadds\tr7, #90\t@ 0x5a\n+\tadds\tr7, #102\t@ 0x66\n \tmovs\tr5, r6\n-\tsubs\tr1, #192\t@ 0xc0\n+\tsubs\tr1, #204\t@ 0xcc\n \tmovs\tr5, r6\n-\tsubs\tr0, #62\t@ 0x3e\n+\tsubs\tr0, #74\t@ 0x4a\n \tmovs\tr5, r6\n-\tsubs\tr0, #108\t@ 0x6c\n+\tsubs\tr0, #120\t@ 0x78\n \tmovs\tr5, r6\n-\tsubs\tr0, #166\t@ 0xa6\n+\tsubs\tr0, #178\t@ 0xb2\n \tmovs\tr5, r6\n-\tsubs\tr1, #80\t@ 0x50\n+\tsubs\tr1, #92\t@ 0x5c\n \tmovs\tr5, r6\n-\tadds\tr7, #54\t@ 0x36\n+\tadds\tr7, #66\t@ 0x42\n \tmovs\tr5, r6\n-\tsubs\tr1, #144\t@ 0x90\n+\tsubs\tr1, #156\t@ 0x9c\n \tmovs\tr5, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n boost::io::detail::maybe_throw_exception(unsigned char, unsigned int, unsigned int):\n /usr/include/boost/format/parsing.hpp:90\n \tpush\t{r4, r5, lr}\n \tldr\tr5, [pc, #96]\t@ (9d4c4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6978c>)\n@@ -289346,15 +289347,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr6, #92\t@ 0x5c\n+\tadds\tr6, #104\t@ 0x68\n \tmovs\tr5, r6\n \tlsls\tr4, r4, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -289822,15 +289823,15 @@\n \tbic.w\tr0, r0, #12582912\t@ 0xc00000\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tands.w\tr0, r0, #12582912\t@ 0xc00000\n \tlsrs\tr4, r1, #27\n \tmovs\tr0, r0\n \tubfx\tr0, r6, #1, #1\n-\tadds\tr1, #240\t@ 0xf0\n+\tadds\tr1, #252\t@ 0xfc\n \tmovs\tr5, r6\n \tlsls\tr0, r5, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -289979,15 +289980,15 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t9dd50 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a018>\n \t\t\t@ instruction: 0xf2f80040\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf2d80040\n \t\t\t@ instruction: 0xf29e0040\n-\tadds\tr1, #36\t@ 0x24\n+\tadds\tr1, #48\t@ 0x30\n \tmovs\tr5, r6\n \tlsls\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -290281,27 +290282,27 @@\n \trsb\tr0, r6, #64\t@ 0x40\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs.w\tr0, lr, #64\t@ 0x40\n \tlsrs\tr4, r1, #27\n \tmovs\tr0, r0\n \tadcs.w\tr0, r2, #64\t@ 0x40\n-\tadds\tr0, #48\t@ 0x30\n+\tadds\tr0, #60\t@ 0x3c\n \tmovs\tr5, r6\n \tlsrs\tr4, r6, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr0, #44\t@ 0x2c\n+\tadds\tr0, #56\t@ 0x38\n \tmovs\tr5, r6\n-\tadds\tr0, #92\t@ 0x5c\n+\tadds\tr0, #104\t@ 0x68\n \tmovs\tr5, r6\n-\tcmp\tr7, #114\t@ 0x72\n+\tcmp\tr7, #126\t@ 0x7e\n \tmovs\tr5, r6\n HashStatistics::loadHashStatisticsFileHeader(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1324\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r0\n \tldr\tr4, [pc, #416]\t@ (9e16c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a434>)\n \tldr\tr2, [pc, #416]\t@ (9e170 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a438>)\n@@ -290505,30 +290506,30 @@\n \tb.n\t9e0dc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a3a4>\n \tb.n\t9e160 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a428>\n \tnop\n \tvmla.i16\td0, d0, d0[0]\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvhadd.s\tq8, q7, q0\n-\tcmp\tr7, #28\n+\tcmp\tr7, #40\t@ 0x28\n \tmovs\tr5, r6\n \tvhadd.s16\tq0, q6, q0\n-\tcmp\tr6, #170\t@ 0xaa\n+\tcmp\tr6, #182\t@ 0xb6\n \tmovs\tr5, r6\n-\tcmp\tr6, #168\t@ 0xa8\n+\tcmp\tr6, #180\t@ 0xb4\n \tmovs\tr5, r6\n \tlsrs\tr0, r1, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr6, #68\t@ 0x44\n+\tcmp\tr6, #80\t@ 0x50\n \tmovs\tr5, r6\n HashStatistics::saveHashStatistics(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1207\n \tldr\tr2, [pc, #340]\t@ (9e2f4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a5bc>)\n \tldr\tr3, [pc, #344]\t@ (9e2f8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a5c0>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -290704,31 +290705,31 @@\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t9e26a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a532>\n \tb.n\t9e2e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a5b0>\n \tnop\n \tstcl\t0, cr0, [r0, #256]\t@ 0x100\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr5, #188\t@ 0xbc\n+\tcmp\tr5, #200\t@ 0xc8\n \tmovs\tr5, r6\n \tstc\t0, cr0, [r4, #256]!\t@ 0x100\n \tstc\t0, cr0, [r8, #256]\t@ 0x100\n-\tcmp\tr5, #26\n+\tcmp\tr5, #38\t@ 0x26\n \tmovs\tr5, r6\n-\tsubs\tr1, #24\n+\tsubs\tr1, #36\t@ 0x24\n \tmovs\tr5, r6\n \tlsls\tr4, r3, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr4, #210\t@ 0xd2\n+\tcmp\tr4, #222\t@ 0xde\n \tmovs\tr5, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_calcMidHashStatIndex(std::vector >::hashstat_t, std::allocator >::hashstat_t> > const&, unsigned int):\n ./src/mira/hashstats.C:1552\n \tldr\tr0, [pc, #940]\t@ (9e6d8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a9a0>)\n \tldr\tr3, [pc, #944]\t@ (9e6dc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a9a4>)\n@@ -291239,15 +291240,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr0, #24\n+\tcmp\tr0, #36\t@ 0x24\n \tmovs\tr5, r6\n \tlsrs\tr4, r7, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -291727,15 +291728,15 @@\n \tmovs\tr0, r0\n \tb.n\t9e610 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a8d8>\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r4, #12\n \tmovs\tr0, r0\n \tb.n\t9e584 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a84c>\n \tlsls\tr0, r0, #1\n-\tmovs\tr3, #148\t@ 0x94\n+\tmovs\tr3, #160\t@ 0xa0\n \tmovs\tr5, r6\n \tlsrs\tr0, r4, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -291892,15 +291893,15 @@\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t9e4c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a790>\n \tlsls\tr0, r0, #1\n \tb.n\t9e450 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6a718>\n \tlsls\tr0, r0, #1\n-\tmovs\tr2, #188\t@ 0xbc\n+\tmovs\tr2, #200\t@ 0xc8\n \tmovs\tr5, r6\n \tlsls\tr0, r0, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -292197,27 +292198,27 @@\n \tmovs\tr0, r0\n \tb.n\t9f4b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b77c>\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r4, #12\n \tmovs\tr0, r0\n \tb.n\t9f3e4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b6ac>\n \tlsls\tr0, r0, #1\n-\tmovs\tr1, #200\t@ 0xc8\n+\tmovs\tr1, #212\t@ 0xd4\n \tmovs\tr5, r6\n \tlsrs\tr4, r1, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr1, #196\t@ 0xc4\n+\tmovs\tr1, #208\t@ 0xd0\n \tmovs\tr5, r6\n-\tmovs\tr1, #244\t@ 0xf4\n+\tmovs\tr2, #0\n \tmovs\tr5, r6\n-\tmovs\tr1, #10\n+\tmovs\tr1, #22\n \tmovs\tr5, r6\n HashStatistics >::loadHashStatisticsFileHeader(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1324\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r0\n \tldr\tr4, [pc, #416]\t@ (9efd4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b29c>)\n \tldr\tr2, [pc, #416]\t@ (9efd8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b2a0>)\n@@ -292423,31 +292424,31 @@\n \tnop\n \tb.n\t9f228 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b4f0>\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t9f20c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b4d4>\n \tlsls\tr0, r0, #1\n-\tmovs\tr0, #180\t@ 0xb4\n+\tmovs\tr0, #192\t@ 0xc0\n \tmovs\tr5, r6\n \tb.n\t9f150 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b418>\n \tlsls\tr0, r0, #1\n-\tmovs\tr0, #66\t@ 0x42\n+\tmovs\tr0, #78\t@ 0x4e\n \tmovs\tr5, r6\n-\tmovs\tr0, #64\t@ 0x40\n+\tmovs\tr0, #76\t@ 0x4c\n \tmovs\tr5, r6\n \tlsrs\tr0, r5, #11\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr4, r3, #7\n+\tsubs\tr0, r5, #7\n \tmovs\tr5, r6\n HashStatistics >::saveHashStatistics(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1207\n \tldr\tr2, [pc, #340]\t@ (9f15c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b424>)\n \tldr\tr3, [pc, #344]\t@ (9f160 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b428>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -292624,33 +292625,33 @@\n \tb.n\t9f0d2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b39a>\n \tb.n\t9f150 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b418>\n \tnop\n \tsvc\t88\t@ 0x58\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tsubs\tr4, r2, #5\n+\tsubs\tr0, r4, #5\n \tmovs\tr5, r6\n \tsvc\t60\t@ 0x3c\n \tlsls\tr0, r0, #1\n \tsvc\t32\n \tlsls\tr0, r0, #1\n-\tsubs\tr2, r6, #2\n+\tsubs\tr6, r7, #2\n \tmovs\tr5, r6\n-\tcmp\tr2, #176\t@ 0xb0\n+\tcmp\tr2, #188\t@ 0xbc\n \tmovs\tr5, r6\n \tasrs\tr4, r7, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr2, r5, #1\n+\tsubs\tr6, r6, #1\n \tmovs\tr5, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_calcMidHashStatIndex(std::vector >::hashstat_t, std::allocator >::hashstat_t> > const&, unsigned int):\n ./src/mira/hashstats.C:1552\n \tldr\tr0, [pc, #940]\t@ (9f540 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b808>)\n \tldr\tr3, [pc, #944]\t@ (9f544 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6b80c>)\n@@ -293163,15 +293164,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr6, r6, r6\n+\tadds\tr2, r0, r7\n \tmovs\tr5, r6\n \tlsrs\tr4, r6, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -293650,15 +293651,15 @@\n \tmovs\tr0, r0\n \tbvc.n\t9f9b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6bc7c>\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r5, #26\n \tmovs\tr0, r0\n \tbvc.n\t9f928 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6bbf0>\n \tlsls\tr0, r0, #1\n-\tasrs\tr0, r7, #20\n+\tasrs\tr4, r0, #21\n \tmovs\tr5, r6\n \tlsls\tr0, r5, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -293815,15 +293816,15 @@\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbvs.n\t9fa6c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6bd34>\n \tlsls\tr0, r0, #1\n \tbpl.n\t9f9f4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6bcbc>\n \tlsls\tr0, r0, #1\n-\tasrs\tr0, r4, #17\n+\tasrs\tr4, r5, #17\n \tmovs\tr5, r6\n \tlsrs\tr0, r2, #7\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -294120,27 +294121,27 @@\n \tmovs\tr0, r0\n \tbmi.n\t9fc58 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6bf20>\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r5, #26\n \tmovs\tr0, r0\n \tbmi.n\t9fb88 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6be50>\n \tlsls\tr0, r0, #1\n-\tasrs\tr4, r5, #13\n+\tasrs\tr0, r7, #13\n \tmovs\tr5, r6\n \tlsrs\tr4, r7, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr0, r5, #13\n+\tasrs\tr4, r6, #13\n \tmovs\tr5, r6\n-\tasrs\tr0, r3, #14\n+\tasrs\tr4, r4, #14\n \tmovs\tr5, r6\n-\tasrs\tr6, r5, #10\n+\tasrs\tr2, r7, #10\n \tmovs\tr5, r6\n HashStatistics >::loadHashStatisticsFileHeader(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1324\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r0\n \tldr\tr4, [pc, #416]\t@ (9fe30 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c0f8>)\n \tldr\tr2, [pc, #416]\t@ (9fe34 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c0fc>)\n@@ -294346,31 +294347,31 @@\n \tnop\n \tbcs.n\t9fdcc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c094>\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbcs.n\t9fdb0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c078>\n \tlsls\tr0, r0, #1\n-\tasrs\tr0, r3, #9\n+\tasrs\tr4, r4, #9\n \tmovs\tr5, r6\n \tbcs.n\t9fef4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c1bc>\n \tlsls\tr0, r0, #1\n-\tasrs\tr6, r4, #7\n+\tasrs\tr2, r6, #7\n \tmovs\tr5, r6\n-\tasrs\tr4, r4, #7\n+\tasrs\tr0, r6, #7\n \tmovs\tr5, r6\n \tlsrs\tr4, r2, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr0, r0, #6\n+\tasrs\tr4, r1, #6\n \tmovs\tr5, r6\n HashStatistics >::saveHashStatistics(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1207\n \tldr\tr2, [pc, #340]\t@ (9ffb8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c280>)\n \tldr\tr3, [pc, #344]\t@ (9ffbc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c284>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -294547,33 +294548,33 @@\n \tb.n\t9ff2e , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c1f6>\n \tb.n\t9ffac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c274>\n \tnop\n \tbeq.n\t9ffb4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c27c>\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr0, r7, #3\n+\tasrs\tr4, r0, #4\n \tmovs\tr5, r6\n \tbeq.n\t9ff88 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c250>\n \tlsls\tr0, r0, #1\n \tbeq.n\t9ff54 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c21c>\n \tlsls\tr0, r0, #1\n-\tasrs\tr6, r2, #1\n+\tasrs\tr2, r4, #1\n \tmovs\tr5, r6\n-\tadds\tr4, r2, #1\n+\tadds\tr0, r4, #1\n \tmovs\tr5, r6\n \tasrs\tr0, r0, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr6, r1, #32\n+\tasrs\tr2, r3, #32\n \tmovs\tr5, r6\n HashStatistics >::priv_calcMidHashStatIndex(std::vector >::hashstat_t, std::allocator >::hashstat_t> > const&, unsigned int):\n ./src/mira/hashstats.C:1552\n \tldr\tr0, [pc, #948]\t@ (a03a0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c668>)\n \tldr\tr3, [pc, #952]\t@ (a03a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6c66c>)\n \tadd\tr0, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -295083,15 +295084,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr4, r2, #13\n+\tlsrs\tr0, r4, #13\n \tmovs\tr5, r6\n \tlsrs\tr4, r3, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -295568,15 +295569,15 @@\n \tmovs\tr0, r0\n \tldmia\tr0!, {r2, r4, r5, r6, r7}\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r6, #20\n \tmovs\tr0, r0\n \tldmia\tr0!, {r1, r3, r5, r7}\n \tlsls\tr0, r0, #1\n-\tlsls\tr4, r2, #27\n+\tlsls\tr0, r4, #27\n \tmovs\tr5, r6\n \tlsrs\tr4, r6, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -295733,15 +295734,15 @@\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr7!, {r2, r4, r5, r7}\n \tlsls\tr0, r0, #1\n \tstmia\tr7!, {r1, r2, r4, r5, r6}\n \tlsls\tr0, r0, #1\n-\tlsls\tr4, r7, #23\n+\tlsls\tr0, r1, #24\n \tmovs\tr5, r6\n \tlsls\tr0, r1, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -296038,27 +296039,27 @@\n \tmovs\tr0, r0\n \tstmia\tr6!, {r1, r2, r4, r7}\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r6, #20\n \tmovs\tr0, r0\n \tstmia\tr6!, {r1, r3, r5}\n \tlsls\tr0, r0, #1\n-\tlsls\tr0, r1, #20\n+\tlsls\tr4, r2, #20\n \tmovs\tr5, r6\n \tlsrs\tr0, r6, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr4, r0, #20\n+\tlsls\tr0, r2, #20\n \tmovs\tr5, r6\n-\tlsls\tr4, r6, #20\n+\tlsls\tr0, r0, #21\n \tmovs\tr5, r6\n-\tlsls\tr2, r1, #17\n+\tlsls\tr6, r2, #17\n \tmovs\tr5, r6\n HashStatistics >::loadHashStatisticsFileHeader(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1324\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r0\n \tldr\tr4, [pc, #416]\t@ (a0c94 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6cf5c>)\n \tldr\tr2, [pc, #416]\t@ (a0c98 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6cf60>)\n@@ -296264,31 +296265,31 @@\n \tnop\n \tstmia\tr4!, {r3, r5, r6}\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr4!, {r1, r2, r4, r6}\n \tlsls\tr0, r0, #1\n-\tlsls\tr4, r6, #15\n+\tlsls\tr0, r0, #16\n \tmovs\tr5, r6\n \tstmia\tr3!, {r2, r4, r5, r6, r7}\n \tlsls\tr0, r0, #1\n-\tlsls\tr2, r0, #14\n+\tlsls\tr6, r1, #14\n \tmovs\tr5, r6\n-\tlsls\tr0, r0, #14\n+\tlsls\tr4, r1, #14\n \tmovs\tr5, r6\n \tlsls\tr0, r1, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr4, r3, #12\n+\tlsls\tr0, r5, #12\n \tmovs\tr5, r6\n HashStatistics >::saveHashStatistics(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:1207\n \tldr\tr2, [pc, #340]\t@ (a0e1c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d0e4>)\n \tldr\tr3, [pc, #344]\t@ (a0e20 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d0e8>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -296465,33 +296466,33 @@\n \tb.n\ta0d92 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d05a>\n \tb.n\ta0e10 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d0d8>\n \tnop\n \tstmia\tr2!, {r3, r4, r7}\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsls\tr4, r2, #10\n+\tlsls\tr0, r4, #10\n \tmovs\tr5, r6\n \tstmia\tr2!, {r2, r3, r4, r5, r6}\n \tlsls\tr0, r0, #1\n \tstmia\tr2!, {r5, r6}\n \tlsls\tr0, r0, #1\n-\tlsls\tr2, r6, #7\n+\tlsls\tr6, r7, #7\n \tmovs\tr5, r6\n-\tlsrs\tr0, r6, #23\n+\tlsrs\tr4, r7, #23\n \tmovs\tr5, r6\n \tlsrs\tr0, r5, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr2, r5, #6\n+\tlsls\tr6, r6, #6\n \tmovs\tr5, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics::estimDigiNormCov(Read&):\n ./src/mira/hashstats.C:3158\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n@@ -297017,21 +297018,21 @@\n \tlsls\tr0, r0, #1\n \tasrs\tr4, r0, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tble.n\ta12f8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d5c0>\n+\tble.n\ta1310 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d5d8>\n \tmovs\tr4, r6\n-\tble.n\ta12d4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d59c>\n+\tble.n\ta12ec , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d5b4>\n \tmovs\tr4, r6\n-\tble.n\ta12c8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d590>\n+\tble.n\ta12e0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d5a8>\n \tmovs\tr4, r6\n-\tble.n\ta12c4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d58c>\n+\tble.n\ta12dc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d5a4>\n \tmovs\tr4, r6\n ./src/mira/hashstats.C:3162 (discriminator 1)\n \tadd\tr4, sp, #68\t@ 0x44\n \tmov\tr0, r4\n \tbl\t968b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x62b7c>\n /usr/include/c++/10/ostream:611 (discriminator 1)\n \tldr\tr1, [pc, #288]\t@ (a1398 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d660>)\n@@ -297182,26 +297183,26 @@\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\ta136c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d634>\n \tb.n\ta138a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d652>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\ta1378 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d640>\n \tb.n\ta138a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d652>\n-\tstc2\t0, cr0, [r6, #-208]\t@ 0xffffff30\n+\tldc2\t0, cr0, [r2, #-208]\t@ 0xffffff30\n \tlsrs\tr4, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tblt.n\ta1380 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d648>\n+\tblt.n\ta1398 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d660>\n \tmovs\tr4, r6\n-\tblt.n\ta13a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d66c>\n+\tbgt.n\ta13bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d684>\n \tmovs\tr4, r6\n-\tblt.n\ta1398 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d660>\n+\tblt.n\ta13b0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6d678>\n \tmovs\tr4, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::estimDigiNormCov(Read&):\n ./src/mira/hashstats.C:3158\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n@@ -298084,34 +298085,34 @@\n \tb.n\ta1a60 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dd28>\n \tb.n\ta1a94 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dd5c>\n \tnop\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbvs.n\ta1afc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ddc4>\n+\tbvs.n\ta1b14 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dddc>\n \tmovs\tr4, r6\n-\tbvs.n\ta1ad8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dda0>\n+\tbvs.n\ta1af0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ddb8>\n \tmovs\tr4, r6\n-\tbvs.n\ta1ac8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dd90>\n+\tbvs.n\ta1ae0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dda8>\n \tmovs\tr4, r6\n-\tbvs.n\ta1ac4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dd8c>\n+\tbvs.n\ta1adc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dda4>\n \tmovs\tr4, r6\n-\t\t\t@ instruction: 0xf6200034\n+\t\t\t@ instruction: 0xf62c0034\n \tlsrs\tr0, r3, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbpl.n\ta1acc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6dd94>\n+\tbpl.n\ta1ae4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ddac>\n \tmovs\tr4, r6\n-\tbpl.n\ta1af0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ddb8>\n+\tbpl.n\ta1b08 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ddd0>\n \tmovs\tr4, r6\n-\tbpl.n\ta1ae4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ddac>\n+\tbpl.n\ta1afc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ddc4>\n \tmovs\tr4, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::estimDigiNormCov(Read&):\n ./src/mira/hashstats.C:3158\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr4, [pc, #1008]\t@ (a1ed0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6e198>)\n@@ -299111,34 +299112,34 @@\n \tb.n\ta2250 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6e518>\n \tb.n\ta2288 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6e550>\n \tnop\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr6!, {r1, r4, r5}\n+\tldmia\tr6!, {r1, r2, r3, r4, r5}\n \tmovs\tr4, r6\n-\tldmia\tr6!, {r1, r2, r3, r4}\n+\tldmia\tr6!, {r1, r3, r5}\n \tmovs\tr4, r6\n-\tldmia\tr6!, {r2, r4}\n+\tldmia\tr6!, {r5}\n \tmovs\tr4, r6\n-\tldmia\tr6!, {r4}\n+\tldmia\tr6!, {r2, r3, r4}\n \tmovs\tr4, r6\n-\tmcr\t0, 1, r0, cr12, cr4, {1}\n+\tmrc\t0, 1, r0, cr8, cr4, {1}\n \tlsrs\tr0, r0, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r4}\n+\tldmia\tr5!, {r2, r3, r4}\n \tmovs\tr4, r6\n-\tldmia\tr5, {r5}\n+\tldmia\tr5, {r2, r3, r5}\n \tmovs\tr4, r6\n-\tldmia\tr5!, {r3, r4}\n+\tldmia\tr5, {r2, r5}\n \tmovs\tr4, r6\n HashStatistics >::estimDigiNormCov(Read&):\n ./src/mira/hashstats.C:3158\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr4, [pc, #1224]\t@ a2798 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ea60>\n \tvpush\t{d8-d10}\n \tsub.w\tsp, sp, #540\t@ 0x21c\n@@ -300397,35 +300398,35 @@\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\ta2c8a , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ef52>\n \tb.n\ta2cc2 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6ef8a>\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr4!, {r2, r6}\n+\tstmia\tr4!, {r4, r6}\n \tmovs\tr4, r6\n-\tstmia\tr4!, {r1, r4, r5}\n+\tstmia\tr4!, {r1, r2, r3, r4, r5}\n \tmovs\tr4, r6\n-\tstmia\tr4!, {r3, r5}\n+\tstmia\tr4!, {r2, r4, r5}\n \tmovs\tr4, r6\n-\tstmia\tr4!, {r2, r5}\n+\tstmia\tr4!, {r4, r5}\n \tmovs\tr4, r6\n-\tb.n\ta2560 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6e828>\n+\tb.n\ta2578 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6e840>\n \tmovs\tr4, r6\n \tlsrs\tr0, r0, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr2!, {r2, r4, r6, r7}\n+\tstmia\tr2!, {r5, r6, r7}\n \tmovs\tr4, r6\n-\tstmia\tr2!, {r2, r5, r6, r7}\n+\tstmia\tr2!, {r4, r5, r6, r7}\n \tmovs\tr4, r6\n-\tstmia\tr2!, {r1, r2, r3, r4, r6, r7}\n+\tstmia\tr2!, {r1, r3, r5, r6, r7}\n \tmovs\tr4, r6\n boost::basic_format, std::allocator >::~basic_format():\n /usr/include/boost/optional/optional.hpp:756\n \tldrb.w\tr3, [r0, #124]\t@ 0x7c\n /usr/include/boost/format/format_class.hpp:30\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr5, r0\n@@ -300684,21 +300685,21 @@\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr1, pc, #384\t@ (adr r1, a3034 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f2fc>)\n \tlsls\tr0, r0, #1\n \tadd\tr1, pc, #232\t@ (adr r1, a2fa0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f268>)\n \tlsls\tr0, r0, #1\n-\tb.n\ta3190 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f458>\n+\tb.n\ta31a8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f470>\n \tmovs\tr4, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tblt.n\ta2dd8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f0a0>\n+\tblt.n\ta2df0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f0b8>\n \tmovs\tr4, r6\n-\tb.n\ta3164 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f42c>\n+\tb.n\ta317c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f444>\n \tmovs\tr4, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n boost::thread_group::join_all():\n /usr/include/boost/thread/detail/thread_group.hpp:107\n@@ -301143,31 +301144,31 @@\n \t...\n \tadd\tr0, pc, #544\t@ (adr r0, a3424 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f6ec>)\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr0, pc, #368\t@ (adr r0, a337c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f644>)\n \tlsls\tr0, r0, #1\n-\tbvs.n\ta31f8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f4c0>\n+\tbvc.n\ta3210 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f4d8>\n \tmovs\tr4, r6\n-\t\t\t@ instruction: 0x47f6\n+\tldr\tr0, [pc, #8]\t@ (a321c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f4e4>)\n \tmovs\tr4, r6\n-\tbvc.n\ta3230 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f4f8>\n+\tbvc.n\ta3248 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f510>\n \tmovs\tr4, r6\n-\tsvc\t184\t@ 0xb8\n+\tsvc\t196\t@ 0xc4\n \tmovs\tr4, r6\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r3, r4, r5, r6}\n+\tstmia\tr5!, {r2, r7}\n \tmovs\tr4, r6\n-\tbls.n\ta31b8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f480>\n+\tbls.n\ta31d0 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f498>\n \tmovs\tr4, r6\n-\tstmia\tr5!, {r2, r4, r5, r7}\n+\tstmia\tr5!, {r6, r7}\n \tmovs\tr4, r6\n \tldr\tr5, [sp, #632]\t@ 0x278\n \tlsls\tr0, r0, #1\n /usr/include/boost/thread/pthread/condition_variable.hpp:147\n \tadd.w\tfp, r8, #192\t@ 0xc0\n /usr/include/boost/thread/pthread/shared_mutex.hpp:253\n \tmov.w\tip, #1\n@@ -301548,79 +301549,79 @@\n \tb.n\ta34e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7b0>\n \tb.n\ta34de , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7a6>\n \tb.n\ta34e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7b0>\n \tb.n\ta34de , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7a6>\n \tb.n\ta34e8 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7b0>\n \tb.n\ta34de , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7a6>\n \tnop\n-\tbge.n\ta354c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f814>\n+\tbge.n\ta3564 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f82c>\n \tmovs\tr4, r6\n-\tbls.n\ta35ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f874>\n+\tbls.n\ta35c4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f88c>\n \tmovs\tr4, r6\n-\tstmia\tr3!, {r1, r2, r4, r5, r6, r7}\n+\tstmia\tr4!, {r1}\n \tmovs\tr4, r6\n-\tbge.n\ta345c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f724>\n+\tbge.n\ta3474 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f73c>\n \tmovs\tr4, r6\n-\tbhi.n\ta342c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f6f4>\n+\tbhi.n\ta3444 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f70c>\n \tmovs\tr4, r6\n-\tbge.n\ta34fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7c4>\n+\tbge.n\ta3514 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7dc>\n \tmovs\tr4, r6\n-\tble.n\ta35ec , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f8b4>\n+\tble.n\ta3604 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f8cc>\n \tmovs\tr4, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tble.n\ta3480 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f748>\n+\tble.n\ta3498 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f760>\n \tmovs\tr4, r6\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tbvc.n\ta3564 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f82c>\n+\tbvc.n\ta357c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f844>\n \tmovs\tr4, r6\n-\tbvs.n\ta352c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7f4>\n+\tbvc.n\ta3544 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f80c>\n \tmovs\tr4, r6\n-\tbge.n\ta3564 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f82c>\n+\tbge.n\ta357c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f844>\n \tmovs\tr4, r6\n-\tbvc.n\ta3534 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7fc>\n+\tbhi.n\ta354c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f814>\n \tmovs\tr4, r6\n-\tbge.n\ta35ec , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f8b4>\n+\tbge.n\ta3604 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f8cc>\n \tmovs\tr4, r6\n-\tbls.n\ta349c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f764>\n+\tbls.n\ta34b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f77c>\n \tmovs\tr4, r6\n-\tbls.n\ta3564 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f82c>\n+\tbls.n\ta357c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f844>\n \tmovs\tr4, r6\n-\tbls.n\ta34fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7c4>\n+\tbls.n\ta3514 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7dc>\n \tmovs\tr4, r6\n-\tbhi.n\ta34e4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7ac>\n+\tbhi.n\ta34fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7c4>\n \tmovs\tr4, r6\n-\tbhi.n\ta3544 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f80c>\n+\tbls.n\ta355c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f824>\n \tmovs\tr4, r6\n-\tbls.n\ta35bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f884>\n+\tbls.n\ta35d4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f89c>\n \tmovs\tr4, r6\n-\tbhi.n\ta359c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f864>\n+\tbhi.n\ta35b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f87c>\n \tmovs\tr4, r6\n-\tbhi.n\ta364c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f914>\n+\tbhi.n\ta3664 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f92c>\n \tmovs\tr4, r6\n-\tbvc.n\ta362c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f8f4>\n+\tbvc.n\ta3644 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f90c>\n \tmovs\tr4, r6\n-\tbvs.n\ta348c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f754>\n+\tbvs.n\ta34a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f76c>\n \tmovs\tr4, r6\n-\tstmia\tr2!, {r4, r5, r7}\n+\tstmia\tr2!, {r2, r3, r4, r5, r7}\n \tmovs\tr4, r6\n-\tbvs.n\ta3574 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f83c>\n+\tbvc.n\ta358c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f854>\n \tmovs\tr4, r6\n-\tstmia\tr2!, {r2, r3, r5, r6, r7}\n+\tstmia\tr2!, {r3, r4, r5, r6, r7}\n \tmovs\tr4, r6\n-\tbgt.n\ta35bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f884>\n+\tbgt.n\ta35d4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f89c>\n \tmovs\tr4, r6\n-\tbvs.n\ta3604 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f8cc>\n+\tbvs.n\ta361c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f8e4>\n \tmovs\tr4, r6\n-\tbgt.n\ta358c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f854>\n+\tbgt.n\ta35a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f86c>\n \tmovs\tr4, r6\n-\tblt.n\ta3514 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7dc>\n+\tblt.n\ta352c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f7f4>\n \tmovs\tr4, r6\n-\tbpl.n\ta3554 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f81c>\n+\tbpl.n\ta356c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6f834>\n \tmovs\tr4, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n boost::shared_mutex::lock():\n /usr/include/boost/thread/pthread/shared_mutex.hpp:266\n@@ -302068,57 +302069,57 @@\n \t...\n \tldr\tr1, [sp, #768]\t@ 0x300\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr1, [sp, #640]\t@ 0x280\n \tlsls\tr0, r0, #1\n-\tbeq.n\ta3948 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc10>\n+\tbeq.n\ta3960 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc28>\n \tmovs\tr4, r6\n-\tasrs\tr2, r6\n+\tasrs\tr6, r7\n \tmovs\tr4, r6\n-\tbeq.n\ta3980 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc48>\n+\tbeq.n\ta3998 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc60>\n \tmovs\tr4, r6\n-\tbhi.n\ta38cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fb94>\n+\tbhi.n\ta38e4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fbac>\n \tmovs\tr4, r6\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n-\tbkpt\t0x00ae\n+\tbkpt\t0x00ba\n \tmovs\tr4, r6\n-\tbcs.n\ta38fc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fbc4>\n+\tbcc.n\ta3914 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fbdc>\n \tmovs\tr4, r6\n-\tbkpt\t0x00ea\n+\tbkpt\t0x00f6\n \tmovs\tr4, r6\n \tstr\tr7, [sp, #784]\t@ 0x310\n \tlsls\tr0, r0, #1\n-\tbhi.n\ta3960 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc28>\n+\tbhi.n\ta3978 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc40>\n \tmovs\tr4, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tbvc.n\ta3894 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fb5c>\n+\tbvc.n\ta38ac , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fb74>\n \tmovs\tr4, r6\n-\tbne.n\ta38dc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fba4>\n+\tbne.n\ta38f4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fbbc>\n \tmovs\tr4, r6\n-\tpop\t{r1, r2, r3, r4, r5, r6, r7, pc}\n+\tbkpt\t0x000a\n \tmovs\tr4, r6\n-\tbcs.n\ta39bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc84>\n+\tbcs.n\ta39d4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc9c>\n \tmovs\tr4, r6\n-\tbkpt\t0x003a\n+\tbkpt\t0x0046\n \tmovs\tr4, r6\n-\tbne.n\ta3884 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fb4c>\n+\tbne.n\ta389c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fb64>\n \tmovs\tr4, r6\n-\tbne.n\ta384c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fb14>\n+\tbne.n\ta3864 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fb2c>\n \tmovs\tr4, r6\n-\tbvc.n\ta39d4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc9c>\n+\tbvc.n\ta39ec , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fcb4>\n \tmovs\tr4, r6\n-\tbvc.n\ta395c , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc24>\n+\tbvc.n\ta3974 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc3c>\n \tmovs\tr4, r6\n-\tbne.n\ta39a4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc6c>\n+\tbne.n\ta39bc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x6fc84>\n \tmovs\tr4, r6\n /usr/include/boost/thread/exceptions.hpp:70\n \tmov\tr0, r5\n \tstr\tr4, [sp, #24]\n \tbl\t28c58 \n /usr/include/boost/thread/lock_types.hpp:329\n \tldrb.w\tr4, [sp, #8]\n@@ -302968,15 +302969,15 @@\n \tblx\tb6dc \n \tstr\tr5, [sp, #368]\t@ 0x170\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr3, [sp, #680]\t@ 0x2a8\n \tlsls\tr0, r0, #1\n-\tstrb\tr6, [r3, r6]\n+\tstrb\tr2, [r5, r6]\n \tmovs\tr4, r6\n std::vector::hashstat_t, std::allocator::hashstat_t> >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:66\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/vector.tcc:69\n \tcmp.w\tr1, #134217728\t@ 0x8000000\n /usr/include/c++/10/bits/vector.tcc:66\n@@ -303153,15 +303154,15 @@\n \tstmia.w\tr7, {r0, r1, r2, r3}\n \tb.n\ta4068 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x70330>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (a4194 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x7045c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr2, pc, #704\t@ (adr r2, a4458 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c0>)\n+\tadd\tr2, pc, #752\t@ (adr r2, a4488 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2f0>)\n \tmovs\tr4, r6\n \n 000a4198 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base>:\n std::__cxx11::basic_string, std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&):\n /usr/include/c++/10/bits/basic_string.tcc:1152\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n@@ -303220,15 +303221,15 @@\n \tldr\tr1, [r4, #8]\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tldr\tr1, [pc, #104]\t@ (a4270 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xd8>)\n+\tldr\tr1, [pc, #152]\t@ (a42a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x108>)\n \tmovs\tr4, r6\n std::vector >::hashstat_t, std::allocator >::hashstat_t> >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:66\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/vector.tcc:69\n \tmovw\tr3, #21845\t@ 0x5555\n \tmovt\tr3, #1365\t@ 0x555\n@@ -303486,15 +303487,15 @@\n \tstrd\tr0, r1, [fp]\n \tb.n\ta42ae , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x116>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (a44a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x310>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldr\tr7, [sp, #624]\t@ 0x270\n+\tldr\tr7, [sp, #672]\t@ 0x2a0\n \tmovs\tr4, r6\n std::vector >::hashstat_t, std::allocator >::hashstat_t> >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:66\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/vector.tcc:69\n \tmovw\tr3, #13107\t@ 0x3333\n \tmovt\tr3, #819\t@ 0x333\n@@ -303683,15 +303684,15 @@\n \tmov\tr1, r2\n \tb.n\ta451a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x382>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (a4660 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x4c8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldr\tr5, [sp, #912]\t@ 0x390\n+\tldr\tr5, [sp, #960]\t@ 0x3c0\n \tmovs\tr4, r6\n std::vector >::hashstat_t, std::allocator >::hashstat_t> >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:66\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/vector.tcc:69\n \tmovw\tr3, #7281\t@ 0x1c71\n \tmovt\tr3, #455\t@ 0x1c7\n@@ -303900,15 +303901,15 @@\n \tblx\tb678 \n \tb.n\ta4700 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x568>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (a482c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x694>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldr\tr4, [sp, #96]\t@ 0x60\n+\tldr\tr4, [sp, #144]\t@ 0x90\n \tmovs\tr4, r6\n void std::vector, std::allocator > >::_M_realloc_insert >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, std::pair&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4026531840\t@ 0xf0000000\n \tldrd\tr7, r8, [r0]\n@@ -304101,15 +304102,15 @@\n \tadd.w\tr5, r7, #8\n \tstmia.w\tr9, {r0, r1}\n \tb.n\ta48b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x718>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (a4a08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x870>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tmovs\tr2, #34\t@ 0x22\n+\tmovs\tr2, #46\t@ 0x2e\n \tmovs\tr4, r6\n boost::detail::thread_data_base::notify_all_at_thread_exit(boost::condition_variable*, boost::mutex*):\n /usr/include/boost/thread/pthread/thread_data.hpp:170\n \tpush\t{r4, r5, lr}\n \tmov\tr3, r0\n \tsub\tsp, #20\n /usr/include/c++/10/bits/vector.tcc:112\n@@ -304611,15 +304612,15 @@\n \tmovw\tr6, #65520\t@ 0xfff0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\ta4de6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xc4e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (a4e10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xc78>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tbx\tr8\n+\tbx\tsl\n \tmovs\tr4, r6\n HashStatistics::loadHashStatistics(HashStatistics::mhsheader_t const&, gzFile_s*&):\n ./src/mira/hashstats.C:1446\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr5, r1\n \tldr\tr1, [pc, #880]\t@ (a518c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff4>)\n \tldr\tr3, [pc, #880]\t@ (a5190 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff8>)\n@@ -305091,39 +305092,39 @@\n \tnop\n \tstrh\tr0, [r0, #10]\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr0, [r7, #8]\n \tlsls\tr0, r0, #1\n-\tstmia\tr2!, {r2, r3, r4, r7}\n+\tstmia\tr2!, {r3, r5, r7}\n \tmovs\tr4, r6\n \tlsls\tr0, r5, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tstrh\tr6, [r3, #0]\n \tlsls\tr0, r0, #1\n-\tstmia\tr1!, {r2, r4}\n+\tstmia\tr1!, {r5}\n \tmovs\tr4, r6\n-\tstmia\tr1!, {r2, r3}\n+\tstmia\tr1!, {r3, r4}\n \tmovs\tr4, r6\n-\tldr\tr4, [r2, #88]\t@ 0x58\n+\tldr\tr4, [r3, #88]\t@ 0x58\n \tmovs\tr6, r6\n-\tstmia\tr1!, {r2, r4, r5}\n+\tstmia\tr1!, {r6}\n \tmovs\tr4, r6\n-\tstmia\tr1!, {r1, r3, r5}\n+\tstmia\tr1!, {r1, r2, r4, r5}\n \tmovs\tr4, r6\n-\tstmia\tr0!, {r5}\n+\tstmia\tr0!, {r2, r3, r5}\n \tmovs\tr4, r6\n-\tstmia\tr0!, {r1, r3, r5}\n+\tstmia\tr0!, {r1, r2, r4, r5}\n \tmovs\tr4, r6\n-\tstmia\tr0!, {r1, r2, r3, r4, r5}\n+\tstmia\tr0!, {r1, r3, r6}\n \tmovs\tr4, r6\n HashStatistics::loadHashStatistics(gzFile_s*&):\n ./src/mira/hashstats.C:1427\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n \tldr\tr2, [pc, #88]\t@ (a522c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1094>)\n \tsub\tsp, #68\t@ 0x44\n@@ -305358,33 +305359,33 @@\n \tb.n\ta530a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1172>\n \tb.n\ta5388 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x11f0>\n \tnop\n \tldrb\tr4, [r4, #20]\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tpop\t{r2, r6, r7}\n+\tpop\t{r4, r6, r7}\n \tmovs\tr4, r6\n \tldrb\tr0, [r1, #20]\n \tlsls\tr0, r0, #1\n \tldrb\tr4, [r4, #19]\n \tlsls\tr0, r0, #1\n-\tpop\t{r1, r2, r4, r5, r6}\n+\tpop\t{r1, r7}\n \tmovs\tr4, r6\n-\tpop\t{r2, r4, r5, r6}\n+\tpop\t{r7}\n \tmovs\tr4, r6\n \tlsrs\tr4, r0, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tpop\t{r1, r4}\n+\tpop\t{r1, r2, r3, r4}\n \tmovs\tr4, r6\n HashStatistics::priv_trimHashVStatsByFrequencyAND(unsigned int, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1734\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/stl_iterator.h:979\n \tldrd\tr5, r8, [r0, #152]\t@ 0x98\n@@ -306845,15 +306846,15 @@\n \tblx\tb6dc \n \tstrb\tr4, [r0, #30]\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r0, #21]\n \tlsls\tr0, r0, #1\n-\tadds\tr5, #66\t@ 0x42\n+\tadds\tr5, #78\t@ 0x4e\n \tmovs\tr4, r6\n HashStatistics >::priv_dn_TestSingleSeq(Read&, std::vector >&, std::vector >&):\n ./src/mira/hashstats.C:3034\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr6, [pc, #1464]\t@ a6600 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2468>\n \tvpush\t{d8}\n \tsub.w\tsp, sp, #548\t@ 0x224\n@@ -308230,35 +308231,35 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\ta6abe , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2926>\n \tb.n\ta6ac4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x292c>\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr2, [r3, #48]\t@ 0x30\n+\tstrh\tr6, [r4, #48]\t@ 0x30\n \tmovs\tr4, r6\n-\tstrh\tr0, [r2, #48]\t@ 0x30\n+\tstrh\tr4, [r3, #48]\t@ 0x30\n \tmovs\tr4, r6\n-\tstrh\tr0, [r1, #48]\t@ 0x30\n+\tstrh\tr4, [r2, #48]\t@ 0x30\n \tmovs\tr4, r6\n-\tstrh\tr4, [r0, #48]\t@ 0x30\n+\tstrh\tr0, [r2, #48]\t@ 0x30\n \tmovs\tr4, r6\n-\tadd\tr6, pc, #112\t@ (adr r6, a6b90 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x29f8>)\n+\tadd\tr6, pc, #160\t@ (adr r6, a6bc0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2a28>)\n \tmovs\tr4, r6\n \tlsrs\tr0, r7, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr2, [r4, #36]\t@ 0x24\n+\tstrh\tr6, [r5, #36]\t@ 0x24\n \tmovs\tr4, r6\n-\tstrh\tr2, [r6, #36]\t@ 0x24\n+\tstrh\tr6, [r7, #36]\t@ 0x24\n \tmovs\tr4, r6\n-\tstrh\tr2, [r5, #36]\t@ 0x24\n+\tstrh\tr6, [r6, #36]\t@ 0x24\n \tmovs\tr4, r6\n HashStatistics::priv_ckmf_relaxed_helper(unsigned long long, unsigned int, bool):\n ./src/mira/hashstats.C:2093\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r3\n \tldr.w\tr4, [pc, #2032]\t@ a7330 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3198>\n \tsub\tsp, #36\t@ 0x24\n@@ -312971,35 +312972,35 @@\n \tlsls\tr0, r0, #1\n \tasrs\tr4, r0, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrsh\tr4, [r3, r5]\n+\tldrsh\tr0, [r5, r5]\n \tmovs\tr4, r6\n-\tldrsh\tr2, [r1, r5]\n+\tldrsh\tr6, [r2, r5]\n \tmovs\tr4, r6\n-\tldrsh\tr0, [r0, r5]\n+\tldrsh\tr4, [r1, r5]\n \tmovs\tr4, r6\n-\tldrsh\tr4, [r7, r4]\n+\tldrsh\tr0, [r1, r5]\n \tmovs\tr4, r6\n-\tldrb\tr6, [r2, #29]\n+\tldrb\tr2, [r4, #29]\n \tmovs\tr4, r6\n \tlsls\tr4, r4, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsh\tr6, [r4, r0]\n+\tldrsh\tr2, [r6, r0]\n \tmovs\tr4, r6\n-\tldrsh\tr6, [r6, r0]\n+\tldrsh\tr2, [r0, r1]\n \tmovs\tr4, r6\n-\tldrsh\tr2, [r6, r0]\n+\tldrsh\tr6, [r7, r0]\n \tmovs\tr4, r6\n HashStatistics >::priv_dn_TestSingleSeq(Read&, std::vector >&, std::vector >&):\n ./src/mira/hashstats.C:3034\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n \tldr\tr5, [pc, #920]\t@ (a9540 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x53a8>)\n \tvpush\t{d8}\n@@ -314005,35 +314006,35 @@\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\ta98de , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x5746>\n \tb.n\ta9916 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x577e>\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrsb\tr6, [r6, r6]\n+\tldrsb\tr2, [r0, r7]\n \tmovs\tr4, r6\n-\tldrsb\tr6, [r4, r6]\n+\tldrsb\tr2, [r6, r6]\n \tmovs\tr4, r6\n-\tldrsb\tr4, [r3, r6]\n+\tldrsb\tr0, [r5, r6]\n \tmovs\tr4, r6\n-\tldrsb\tr0, [r3, r6]\n+\tldrsb\tr4, [r4, r6]\n \tmovs\tr4, r6\n-\tstrb\tr0, [r6, #30]\n+\tstrb\tr4, [r7, #30]\n \tmovs\tr4, r6\n \tlsrs\tr4, r1, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsb\tr0, [r0, r2]\n+\tldrsb\tr4, [r1, r2]\n \tmovs\tr4, r6\n-\tldrsb\tr0, [r2, r2]\n+\tldrsb\tr4, [r3, r2]\n \tmovs\tr4, r6\n-\tldrsb\tr2, [r1, r2]\n+\tldrsb\tr6, [r2, r2]\n \tmovs\tr4, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_dn_TestSingleSeq(Read&, std::vector >&, std::vector >&):\n ./src/mira/hashstats.C:3034\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr6, [pc, #1208]\t@ a9e18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x5c80>\n@@ -315154,35 +315155,35 @@\n \tb.n\taa1c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6028>\n \tb.n\taa1f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6060>\n \tnop\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #856]\t@ (aa568 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x63d0>)\n+\tldr\tr6, [pc, #904]\t@ (aa598 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6400>)\n \tmovs\tr4, r6\n-\tldr\tr6, [pc, #792]\t@ (aa52c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6394>)\n+\tldr\tr6, [pc, #840]\t@ (aa55c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x63c4>)\n \tmovs\tr4, r6\n-\tldr\tr6, [pc, #752]\t@ (aa508 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6370>)\n+\tldr\tr6, [pc, #800]\t@ (aa538 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x63a0>)\n \tmovs\tr4, r6\n-\tldr\tr6, [pc, #736]\t@ (aa4fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6364>)\n+\tldr\tr6, [pc, #784]\t@ (aa52c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6394>)\n \tmovs\tr4, r6\n-\tldr\tr0, [r2, #108]\t@ 0x6c\n+\tldr\tr4, [r3, #108]\t@ 0x6c\n \tmovs\tr4, r6\n \tlsls\tr4, r7, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #640]\t@ (aa4b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6318>)\n+\tldr\tr5, [pc, #688]\t@ (aa4e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6348>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #704]\t@ (aa4f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x635c>)\n+\tldr\tr5, [pc, #752]\t@ (aa524 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x638c>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #672]\t@ (aa4d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6340>)\n+\tldr\tr5, [pc, #720]\t@ (aa508 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6370>)\n \tmovs\tr4, r6\n std::vector::vhrap_t, std::allocator::vhrap_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\taa374 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x61dc>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -315653,15 +315654,15 @@\n \tmovw\tr6, #65520\t@ 0xfff0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\taa636 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x649e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (aa660 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x64c8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tmrc\t0, 7, r0, cr6, cr3, {1}\n+\tvqadd.s8\td0, d2, d19\n HashStatistics::priv_arb_DoStuff(ReadPool&, unsigned int, std::vector::hashstat_t, std::allocator::hashstat_t> >&, unsigned int, std::vector::hsvbendit_t, std::allocator::hsvbendit_t> >&, bool, int, int, bool):\n ./src/mira/hashstats.C:2361\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tvmov\ts4, r2\n \tldr.w\tr5, [pc, #3004]\t@ ab22c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7094>\n \tvpush\t{d8-d9}\n \tsub\tsp, #420\t@ 0x1a4\n@@ -317272,26 +317273,26 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\taae38 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6ca0>\n+\tb.n\taae50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6cb8>\n \tmovs\tr3, r6\n-\tb.n\taae34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6c9c>\n+\tb.n\taae4c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6cb4>\n \tmovs\tr3, r6\n-\tstc2\t0, cr0, [r8], #-212\t@ 0xffffff2c\n+\tldc2\t0, cr0, [r0], #-212\t@ 0xffffff2c\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstr\tr0, [r0, #4]\n+\tstr\tr4, [r1, #4]\n \tmovs\tr4, r6\n \tlsls\tr0, r2, #27\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #184]\t@ 0xb8\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd.w\tr8, sp, #192\t@ 0xc0\n@@ -317525,29 +317526,29 @@\n \tb.n\tab406 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x726e>\n \tadds\tr0, r0, #3\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr0, r7, #2\n \tlsls\tr0, r0, #1\n-\tstrh\tr4, [r7, r5]\n+\tstrh\tr0, [r1, r6]\n \tmovs\tr4, r6\n-\tstmia\tr4!, {r1, r2, r3, r4, r5, r6}\n+\tstmia\tr4!, {r1, r3, r7}\n \tmovs\tr3, r6\n-\tstrh\tr4, [r2, r6]\n+\tstrh\tr0, [r4, r6]\n \tmovs\tr4, r6\n \tadds\tr4, r0, #0\n \tlsls\tr0, r0, #1\n-\tldrsb\tr6, [r5, r1]\n+\tldrsb\tr2, [r7, r1]\n \tmovs\tr4, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tldrb\tr0, [r2, r0]\n+\tldrb\tr4, [r3, r0]\n \tmovs\tr4, r6\n-\tldrsb\tr2, [r6, r0]\n+\tldrsb\tr6, [r7, r0]\n \tmovs\tr4, r6\n \tlsls\tr4, r7, #27\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n std::vector::hashstat_t, std::allocator::hashstat_t> >, std::allocator::hashstat_t, std::allocator::hashstat_t> > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n@@ -318466,15 +318467,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\tabb56 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x79be>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (abd0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7b74>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tbhi.n\tabda8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7c10>\n+\tbhi.n\tabdc0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7c28>\n \tmovs\tr3, r6\n boost::io::detail::format_item, std::allocator >::~format_item():\n /usr/include/boost/optional/optional.hpp:756\n \tldrb.w\tr3, [r0, #76]\t@ 0x4c\n /usr/include/boost/format/internals.hpp:65\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -318812,19 +318813,19 @@\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r0, #8\n \tlsls\tr0, r0, #1\n \tasrs\tr0, r4, #3\n \tlsls\tr0, r0, #1\n-\tstrh\tr2, [r6, r2]\n+\tstrh\tr6, [r7, r2]\n \tmovs\tr4, r6\n-\tstrh\tr0, [r6, r6]\n+\tstrh\tr4, [r7, r6]\n \tmovs\tr4, r6\n-\tstrh\tr2, [r4, r7]\n+\tstrh\tr6, [r5, r7]\n \tmovs\tr4, r6\n \tlsrs\tr4, r7, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #17\n \tmovs\tr0, r0\n@@ -318939,15 +318940,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\tac020 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7e88>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (ac040 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7ea8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr3, sp, #944\t@ 0x3b0\n+\tadd\tr3, sp, #992\t@ 0x3e0\n \tmovs\tr3, r6\n std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned int, unsigned int const&):\n /usr/include/c++/10/bits/vector.tcc:512\n \tcmp\tr2, #0\n \tbeq.w\tac1a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8010>\n /usr/include/c++/10/bits/vector.tcc:509\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -319607,15 +319608,15 @@\n \tlsls\tr7, r1, #2\n \tb.n\tac53c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x83a4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (ac570 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x83d8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tbeq.n\tac57c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x83e4>\n+\tbeq.n\tac594 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x83fc>\n \tmovs\tr3, r6\n HashStatistics >::showHashStatisticsInfo():\n ./src/mira/hashstats.C:1624\n \tldr.w\tr1, [pc, #1404]\t@ acaf4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x895c>\n \tldr.w\tr2, [pc, #1404]\t@ acaf8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8960>\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -320310,57 +320311,57 @@\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr2, r2, #7\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #224]\t@ (acbe8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a50>)\n+\tldr\tr5, [pc, #272]\t@ (acc18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a80>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #224]\t@ (acbec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a54>)\n+\tldr\tr5, [pc, #272]\t@ (acc1c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a84>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #408]\t@ (acca8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b10>)\n+\tldr\tr5, [pc, #456]\t@ (accd8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b40>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #248]\t@ (acc0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a74>)\n+\tldr\tr5, [pc, #296]\t@ (acc3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8aa4>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #152]\t@ (acbb0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a18>)\n+\tldr\tr5, [pc, #200]\t@ (acbe0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a48>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #184]\t@ (acbd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a3c>)\n+\tldr\tr5, [pc, #232]\t@ (acc04 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a6c>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #224]\t@ (acc00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a68>)\n+\tldr\tr5, [pc, #272]\t@ (acc30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a98>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #80]\t@ (acb74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89dc>)\n+\tldr\tr5, [pc, #128]\t@ (acba4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a0c>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #728]\t@ (ace00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c68>)\n+\tldr\tr5, [pc, #776]\t@ (ace30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c98>)\n \tmovs\tr4, r6\n-\tldr\tr5, [pc, #64]\t@ (acb6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89d4>)\n+\tldr\tr5, [pc, #112]\t@ (acb9c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a04>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #1008]\t@ (acf20 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d88>)\n+\tldr\tr5, [pc, #32]\t@ (acb50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89b8>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #952]\t@ (aceec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d54>)\n+\tldr\tr4, [pc, #1000]\t@ (acf1c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d84>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #896]\t@ (aceb8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d20>)\n+\tldr\tr4, [pc, #944]\t@ (acee8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d50>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #824]\t@ (ace74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cdc>)\n+\tldr\tr4, [pc, #872]\t@ (acea4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d0c>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #752]\t@ (ace30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c98>)\n+\tldr\tr4, [pc, #800]\t@ (ace60 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cc8>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #680]\t@ (acdec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c54>)\n+\tldr\tr4, [pc, #728]\t@ (ace1c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c84>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #624]\t@ (acdb8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c20>)\n+\tldr\tr4, [pc, #672]\t@ (acde8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c50>)\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #688]\t@ (acdfc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c64>)\n+\tldr\tr4, [pc, #736]\t@ (ace2c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c94>)\n \tmovs\tr4, r6\n-\tldr\tr3, [pc, #792]\t@ (ace68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cd0>)\n+\tldr\tr3, [pc, #840]\t@ (ace98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d00>)\n \tmovs\tr4, r6\n \tlsls\tr0, r4, #25\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #256]\t@ (acc5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8ac4>)\n+\tldr\tr1, [pc, #304]\t@ (acc8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8af4>)\n \tmovs\tr4, r6\n HashStatistics::showHashStatisticsInfo():\n ./src/mira/hashstats.C:1624\n \tldr.w\tr1, [pc, #1388]\t@ ad0cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8f34>\n \tldr.w\tr2, [pc, #1388]\t@ ad0d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8f38>\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -321060,57 +321061,57 @@\n \tlsls\tr0, r0, #1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr2, r5, #15\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbx\tsl\n-\tmovs\tr4, r6\n-\tbx\tsl\n+\tbxns\tfp\n \tmovs\tr4, r6\n-\tbx\tpc\n+\tbxns\tfp\n \tmovs\tr4, r6\n-\tbx\tsl\n+\t\t\t@ instruction: 0x478a\n \tmovs\tr4, r6\n-\tbx\tr7\n+\tbx\tip\n \tmovs\tr4, r6\n-\tbx\tr8\n+\tbx\tr9\n \tmovs\tr4, r6\n \tbx\tsl\n \tmovs\tr4, r6\n-\tbxns\tr5\n+\tbxns\tfp\n \tmovs\tr4, r6\n-\t\t\t@ instruction: 0x47ce\n+\tbx\tr7\n \tmovs\tr4, r6\n-\tbx\tr5\n+\t\t\t@ instruction: 0x47da\n \tmovs\tr4, r6\n-\tbxns\tr2\n+\tbxns\tr6\n \tmovs\tr4, r6\n-\tbx\tr0\n+\tbx\tr4\n \tmovs\tr4, r6\n-\tmov\tr8, pc\n+\tbx\tr2\n \tmovs\tr4, r6\n-\tmov\tlr, ip\n+\tbxns\tr0\n \tmovs\tr4, r6\n-\tmov\tip, sl\n+\tmov\tsl, lr\n \tmovs\tr4, r6\n-\tmov\tsl, r8\n+\tmov\tr8, ip\n \tmovs\tr4, r6\n-\tmov\tip, r6\n+\tmov\tlr, r9\n \tmovs\tr4, r6\n-\tmov\tip, r8\n+\tnop\t\t\t@ (mov r8, r8)\n \tmovs\tr4, r6\n-\tcmp\tr8, lr\n+\tmov\tr8, sl\n+\tmovs\tr4, r6\n+\tcmp\tip, pc\n \tmovs\tr4, r6\n \tlsls\tr2, r1, #2\n \tlsls\tr0, r0, #1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmuls\tr0, r6\n+\tmuls\tr4, r7\n \tmovs\tr4, r6\n HashStatistics >::showHashStatisticsInfo():\n ./src/mira/hashstats.C:1624\n \tldr.w\tr1, [pc, #1404]\t@ ad6b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x951c>\n \tldr.w\tr2, [pc, #1404]\t@ ad6b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9520>\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -321803,56 +321804,56 @@\n \tnop\n \tmcr2\t0, 1, r0, cr4, cr15, {1}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmrc2\t0, 0, r0, cr2, cr15, {1}\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadcs\tr0, r7\n+\tsbcs\tr4, r0\n \tmovs\tr4, r6\n-\tadcs\tr0, r7\n+\tsbcs\tr4, r0\n \tmovs\tr4, r6\n-\tsbcs\tr6, r4\n+\tsbcs\tr2, r6\n \tmovs\tr4, r6\n-\tadcs\tr6, r7\n+\tsbcs\tr2, r1\n \tmovs\tr4, r6\n-\tadcs\tr6, r4\n+\tadcs\tr2, r6\n \tmovs\tr4, r6\n-\tadcs\tr6, r5\n+\tadcs\tr2, r7\n \tmovs\tr4, r6\n-\tadcs\tr0, r7\n+\tsbcs\tr4, r0\n \tmovs\tr4, r6\n-\tadcs\tr4, r2\n+\tadcs\tr0, r4\n \tmovs\tr4, r6\n-\trors\tr6, r6\n+\ttst\tr2, r0\n \tmovs\tr4, r6\n-\tadcs\tr0, r2\n+\tadcs\tr4, r3\n \tmovs\tr4, r6\n-\tasrs\tr4, r7\n+\tadcs\tr0, r1\n \tmovs\tr4, r6\n-\tasrs\tr6, r5\n+\tasrs\tr2, r7\n \tmovs\tr4, r6\n-\tasrs\tr0, r4\n+\tasrs\tr4, r5\n \tmovs\tr4, r6\n-\tasrs\tr6, r1\n+\tasrs\tr2, r3\n \tmovs\tr4, r6\n-\tlsrs\tr4, r7\n+\tasrs\tr0, r1\n \tmovs\tr4, r6\n-\tlsrs\tr2, r5\n+\tlsrs\tr6, r6\n \tmovs\tr4, r6\n-\tlsrs\tr4, r3\n+\tlsrs\tr0, r5\n \tmovs\tr4, r6\n-\tlsrs\tr4, r5\n+\tlsrs\tr0, r7\n \tmovs\tr4, r6\n-\tands\tr6, r0\n+\tands\tr2, r2\n \tmovs\tr4, r6\n \t\t\t@ instruction: 0xfaa0003f\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsubs\tr5, #128\t@ 0x80\n+\tsubs\tr5, #140\t@ 0x8c\n \tmovs\tr4, r6\n HashStatistics >::showHashStatisticsInfo():\n ./src/mira/hashstats.C:1624\n \tldr.w\tr1, [pc, #1404]\t@ adc9c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9b04>\n \tldr.w\tr2, [pc, #1404]\t@ adca0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9b08>\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -322545,56 +322546,56 @@\n \tnop\n \tldrh.w\tr0, [ip, pc, lsl #3]\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh.w\tr0, [sl, pc, lsl #3]\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr3, #144\t@ 0x90\n+\tsubs\tr3, #156\t@ 0x9c\n \tmovs\tr4, r6\n-\tsubs\tr3, #144\t@ 0x90\n+\tsubs\tr3, #156\t@ 0x9c\n \tmovs\tr4, r6\n-\tsubs\tr3, #190\t@ 0xbe\n+\tsubs\tr3, #202\t@ 0xca\n \tmovs\tr4, r6\n-\tsubs\tr3, #150\t@ 0x96\n+\tsubs\tr3, #162\t@ 0xa2\n \tmovs\tr4, r6\n-\tsubs\tr3, #126\t@ 0x7e\n+\tsubs\tr3, #138\t@ 0x8a\n \tmovs\tr4, r6\n-\tsubs\tr3, #134\t@ 0x86\n+\tsubs\tr3, #146\t@ 0x92\n \tmovs\tr4, r6\n-\tsubs\tr3, #144\t@ 0x90\n+\tsubs\tr3, #156\t@ 0x9c\n \tmovs\tr4, r6\n-\tsubs\tr3, #108\t@ 0x6c\n+\tsubs\tr3, #120\t@ 0x78\n \tmovs\tr4, r6\n-\tsubs\tr4, #14\n+\tsubs\tr4, #26\n \tmovs\tr4, r6\n-\tsubs\tr3, #104\t@ 0x68\n+\tsubs\tr3, #116\t@ 0x74\n \tmovs\tr4, r6\n-\tsubs\tr3, #84\t@ 0x54\n+\tsubs\tr3, #96\t@ 0x60\n \tmovs\tr4, r6\n-\tsubs\tr3, #70\t@ 0x46\n+\tsubs\tr3, #82\t@ 0x52\n \tmovs\tr4, r6\n-\tsubs\tr3, #56\t@ 0x38\n+\tsubs\tr3, #68\t@ 0x44\n \tmovs\tr4, r6\n-\tsubs\tr3, #38\t@ 0x26\n+\tsubs\tr3, #50\t@ 0x32\n \tmovs\tr4, r6\n-\tsubs\tr3, #20\n+\tsubs\tr3, #32\n \tmovs\tr4, r6\n-\tsubs\tr3, #2\n+\tsubs\tr3, #14\n \tmovs\tr4, r6\n-\tsubs\tr2, #244\t@ 0xf4\n+\tsubs\tr3, #0\n \tmovs\tr4, r6\n-\tsubs\tr3, #4\n+\tsubs\tr3, #16\n \tmovs\tr4, r6\n-\tsubs\tr2, #30\n+\tsubs\tr2, #42\t@ 0x2a\n \tmovs\tr4, r6\n \t\t\t@ instruction: 0xf4b8003f\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr7, #152\t@ 0x98\n+\tadds\tr7, #164\t@ 0xa4\n \tmovs\tr4, r6\n HashStatistics >::digiNormTestRead(Read&, bool):\n ./src/mira/hashstats.C:3120\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n \tldr\tr0, [pc, #468]\t@ (adee0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9d48>)\n \tldr\tr3, [pc, #472]\t@ (adee4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9d4c>)\n@@ -323701,15 +323702,15 @@\n \tadd.w\tr6, r8, #16\n \tstmia.w\tsl, {r0, r1, r2, r3}\n \tb.n\tae53e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa3a6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (ae698 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa500>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrh\tr2, [r2, #44]\t@ 0x2c\n+\tstrh\tr6, [r3, #44]\t@ 0x2c\n \tmovs\tr3, r6\n boost::movelib::unique_ptr >::~unique_ptr():\n /usr/include/boost/move/unique_ptr.hpp:566\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n /usr/include/boost/move/unique_ptr.hpp:567\n \tldr\tr5, [r0, #0]\n@@ -323893,15 +323894,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\tae7d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa63c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (ae7f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa65c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstrh\tr0, [r7, #32]\n+\tstrh\tr4, [r0, #34]\t@ 0x22\n \tmovs\tr3, r6\n HashStatistics::removeDustEndsFixed(unsigned char, unsigned int):\n ./src/mira/hashstats.C:1829\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r1\n \tldr\tr6, [pc, #680]\t@ (aeaa8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa910>)\n \tvpush\t{d8-d9}\n@@ -325855,15 +325856,15 @@\n \tmovw\tr6, #65528\t@ 0xfff8\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\taf772 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb5da>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (af79c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb604>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr5, [sp, #744]\t@ 0x2e8\n+\tldr\tr5, [sp, #792]\t@ 0x318\n \tmovs\tr3, r6\n HashStatistics >::loadHashStatistics(HashStatistics >::mhsheader_t const&, gzFile_s*&):\n ./src/mira/hashstats.C:1446\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr5, r1\n \tldr\tr1, [pc, #904]\t@ (afb30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb998>)\n \tldr\tr3, [pc, #904]\t@ (afb34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb99c>)\n@@ -326345,39 +326346,39 @@\n \tnop\n \tbvc.n\tafa9c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb904>\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbvc.n\tafa98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb900>\n \tmovs\tr7, r7\n-\tadds\tr2, r2, r4\n+\tadds\tr6, r3, r4\n \tmovs\tr4, r6\n \tlsrs\tr4, r2, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tbvs.n\tafc38 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xbaa0>\n \tmovs\tr7, r7\n-\tasrs\tr2, r5, #29\n+\tasrs\tr6, r6, #29\n \tmovs\tr4, r6\n-\tasrs\tr2, r4, #29\n+\tasrs\tr6, r5, #29\n \tmovs\tr4, r6\n-\tstmia\tr3!, {r1, r3, r5, r6, r7}\n+\tstmia\tr3!, {r1, r4, r5, r6, r7}\n \tmovs\tr5, r6\n-\tasrs\tr2, r1, #30\n+\tasrs\tr6, r2, #30\n \tmovs\tr4, r6\n-\tasrs\tr4, r7, #29\n+\tasrs\tr0, r1, #30\n \tmovs\tr4, r6\n-\tasrs\tr6, r6, #25\n+\tasrs\tr2, r0, #26\n \tmovs\tr4, r6\n-\tasrs\tr0, r0, #26\n+\tasrs\tr4, r1, #26\n \tmovs\tr4, r6\n-\tasrs\tr4, r2, #26\n+\tasrs\tr0, r4, #26\n \tmovs\tr4, r6\n HashStatistics >::loadHashStatistics(gzFile_s*&):\n ./src/mira/hashstats.C:1427\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n \tldr\tr2, [pc, #88]\t@ (afbd0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xba38>)\n \tsub\tsp, #68\t@ 0x44\n@@ -326612,33 +326613,33 @@\n \tb.n\tafcae , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xbb16>\n \tb.n\tafd2c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xbb94>\n \tnop\n \tbcc.n\tafc3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xbaa4>\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr0, r4, #12\n+\tasrs\tr4, r5, #12\n \tmovs\tr4, r6\n \tbcc.n\tafe10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xbc78>\n \tmovs\tr7, r7\n \tbcc.n\tafdcc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xbc34>\n \tmovs\tr7, r7\n-\tasrs\tr2, r2, #11\n+\tasrs\tr6, r3, #11\n \tmovs\tr4, r6\n-\tasrs\tr0, r2, #11\n+\tasrs\tr4, r3, #11\n \tmovs\tr4, r6\n \tlsrs\tr0, r3, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr6, r5, #9\n+\tasrs\tr2, r7, #9\n \tmovs\tr4, r6\n HashStatistics >::priv_trimHashVStatsByFrequencyAND(unsigned int, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1734\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr8, r3\n \tmov\tr6, r0\n ./src/mira/hashstats.C:1741\n@@ -327828,15 +327829,15 @@\n \tblx\tb6dc \n \tbeq.n\tb07d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xc638>\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmia\tr5!, {r1, r3, r4, r6, r7}\n \tmovs\tr7, r7\n-\tldrh\tr6, [r2, #46]\t@ 0x2e\n+\tldrh\tr2, [r4, #46]\t@ 0x2e\n \tmovs\tr3, r6\n std::vector >::vhrap_t, std::allocator >::vhrap_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.n\tb08a2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xc70a>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -328275,15 +328276,15 @@\n \tmovw\tr6, #65528\t@ 0xfff8\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\tb0bae , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xca16>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (b0bd8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xca40>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldrh\tr6, [r7, #10]\n+\tldrh\tr2, [r1, #12]\n \tmovs\tr3, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_arb_DoStuff(ReadPool&, unsigned int, std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned int, std::vector >::hsvbendit_t, std::allocator >::hsvbendit_t> >&, bool, int, int, bool):\n ./src/mira/hashstats.C:2361\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tvmov\ts4, r2\n@@ -330099,29 +330100,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr2, [r5, #28]\n+\tldrb\tr6, [r6, #28]\n \tmovs\tr3, r6\n-\tldrb\tr6, [r4, #28]\n+\tldrb\tr2, [r6, #28]\n \tmovs\tr3, r6\n-\tstr\tr5, [sp, #400]\t@ 0x190\n+\tstr\tr5, [sp, #432]\t@ 0x1b0\n \tmovs\tr5, r6\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #27\n \tmovs\tr0, r0\n-\tldrsh.w\tr0, [r4, r3, lsl #3]\n+\tvst4.8\t{d16-d19}, [r0 :256], r3\n \tlsrs\tr0, r4, #10\n \tmovs\tr0, r0\n HashStatistics >::priv_arb_thread(unsigned int, HashStatistics >::arbs_threadsharecontrol_t*):\n ./src/mira/hashstats.C:2297\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/boost/thread/lock_types.hpp:336\n \tmov\tr4, r2\n@@ -330337,25 +330338,25 @@\n \tb.n\tb1b0e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xd976>\n \tpush\t{r3, r4, r5, r7, lr}\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tpush\t{r4, r5, r7, lr}\n \tmovs\tr7, r7\n-\tldcl\t0, cr0, [r4], #-204\t@ 0xffffff34\n-\tldrb\tr6, [r6, r5]\n+\tstc\t0, cr0, [r0], {51}\t@ 0x33\n+\tldrb\tr2, [r0, r6]\n \tmovs\tr3, r6\n-\tstc\t0, cr0, [ip], {51}\t@ 0x33\n+\tldc\t0, cr0, [r8], {51}\t@ 0x33\n \tpush\t{r2, r3, r4, r5, r6, r7}\n \tmovs\tr7, r7\n-\tvqadd.s32\td16, d6, d19\n+\tvqadd.s64\td16, d2, d19\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tadd.w\tr0, r8, #11730944\t@ 0xb30000\n-\tvqadd.s32\td0, d10, d19\n+\tadds.w\tr0, r4, #11730944\t@ 0xb30000\n+\tvqadd.s64\td0, d6, d19\n \tlsrs\tr4, r5, #24\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n std::vector >::hashstat_t, std::allocator >::hashstat_t> >, std::allocator >::hashstat_t, std::allocator >::hashstat_t> > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n@@ -331273,15 +331274,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\tb225e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0c6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b2414 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe27c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstrb\tr4, [r0, #5]\n+\tstrb\tr0, [r2, #5]\n \tmovs\tr3, r6\n void std::vector >::hashstat_t, std::allocator >::hashstat_t> >::_M_realloc_insert >::hashstat_t const&>(__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, HashStatistics >::hashstat_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr2, #43691\t@ 0xaaab\n@@ -331579,15 +331580,15 @@\n \tstmia.w\tr4, {r0, r1}\n \tb.n\tb24b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe320>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b271c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe584>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr0, r2\n+\tcmp\tr4, r3\n \tmovs\tr3, r6\n void std::vector, std::allocator > >::_M_realloc_insert const&>(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, VLuint<128u> const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4160749568\t@ 0xf8000000\n \tldrd\tr8, r9, [r0]\n@@ -331788,15 +331789,15 @@\n \tadd.w\tr6, r8, #16\n \tstmia.w\tsl, {r0, r1, r2, r3}\n \tb.n\tb27a6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe60e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (b2900 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe768>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\torrs\tr2, r5\n+\torrs\tr6, r6\n \tmovs\tr3, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::removeDustEndsFixed(unsigned char, unsigned int):\n ./src/mira/hashstats.C:1829\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n@@ -334202,15 +334203,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\tb3caa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xfb12>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b3ce4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xfb4c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldr\tr4, [r6, r1]\n+\tldr\tr0, [r0, r2]\n \tmovs\tr3, r6\n HashStatistics >::loadHashStatistics(HashStatistics >::mhsheader_t const&, gzFile_s*&):\n ./src/mira/hashstats.C:1446\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr5, r1\n \tldr\tr1, [pc, #912]\t@ (b4080 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xfee8>)\n \tldr\tr3, [pc, #912]\t@ (b4084 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xfeec>)\n@@ -334696,39 +334697,39 @@\n \tnop\n \tstr\tr2, [sp, #432]\t@ 0x1b0\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr2, [sp, #408]\t@ 0x198\n \tmovs\tr7, r7\n-\tbcc.n\tb4024 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xfe8c>\n+\tbcc.n\tb403c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xfea4>\n \tmovs\tr3, r6\n \tlsrs\tr4, r1, #11\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tstr\tr1, [sp, #144]\t@ 0x90\n \tmovs\tr7, r7\n-\tbcs.n\tb40d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff40>\n+\tbcs.n\tb40f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff58>\n \tmovs\tr3, r6\n-\tbcs.n\tb40cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff34>\n+\tbcs.n\tb40e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff4c>\n \tmovs\tr3, r6\n-\tldrb\tr2, [r3, #26]\n+\tldrb\tr2, [r4, #26]\n \tmovs\tr5, r6\n-\tbcs.n\tb4124 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff8c>\n-\tmovs\tr3, r6\n-\tbcs.n\tb410c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff74>\n+\tbcs.n\tb413c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xffa4>\n \tmovs\tr3, r6\n-\tbne.n\tb4104 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff6c>\n+\tbcs.n\tb4124 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff8c>\n \tmovs\tr3, r6\n \tbne.n\tb411c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff84>\n \tmovs\tr3, r6\n-\tbne.n\tb4148 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xffb0>\n+\tbne.n\tb4134 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff9c>\n+\tmovs\tr3, r6\n+\tbne.n\tb4160 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xffc8>\n \tmovs\tr3, r6\n HashStatistics >::loadHashStatistics(gzFile_s*&):\n ./src/mira/hashstats.C:1427\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n \tldr\tr2, [pc, #88]\t@ (b4120 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xff88>)\n \tsub\tsp, #68\t@ 0x44\n@@ -334963,33 +334964,33 @@\n \tb.n\tb41fe , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x10066>\n \tb.n\tb427c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x100e4>\n \tnop\n \tldrh\tr0, [r6, #48]\t@ 0x30\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r4, r6, r7}\n+\tldmia\tr5!, {r2, r3, r4, r6, r7}\n \tmovs\tr3, r6\n \tldrh\tr4, [r2, #48]\t@ 0x30\n \tmovs\tr7, r7\n \tldrh\tr0, [r6, #46]\t@ 0x2e\n \tmovs\tr7, r7\n-\tldmia\tr5!, {r1, r7}\n+\tldmia\tr5!, {r1, r2, r3, r7}\n \tmovs\tr3, r6\n-\tldmia\tr5!, {r7}\n+\tldmia\tr5!, {r2, r3, r7}\n \tmovs\tr3, r6\n \tlsrs\tr4, r3, #19\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r1, r2, r3, r4}\n+\tldmia\tr5, {r1, r3, r5}\n \tmovs\tr3, r6\n HashStatistics >::priv_trimHashVStatsByFrequencyAND(unsigned int, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1734\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr8, r3\n \tmov\tr6, r0\n ./src/mira/hashstats.C:1741\n@@ -336179,15 +336180,15 @@\n \tblx\tb6dc \n \tldrh\tr0, [r1, #22]\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr2, [r1, #4]\n \tmovs\tr7, r7\n-\tldr\tr0, [pc, #536]\t@ (b4f14 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x10d7c>)\n+\tldr\tr0, [pc, #584]\t@ (b4f44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x10dac>)\n \tmovs\tr3, r6\n std::vector >::vhrap_t, std::allocator >::vhrap_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tsub\tsp, #36\t@ 0x24\n \tstr\tr0, [sp, #4]\n /usr/include/c++/10/bits/vector.tcc:614\n@@ -336749,15 +336750,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\tb515e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x10fc6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b5190 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x10ff8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tmvns\tr0, r1\n+\tmvns\tr4, r2\n \tmovs\tr3, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_arb_DoStuff(ReadPool&, unsigned int, std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned int, std::vector >::hsvbendit_t, std::allocator >::hsvbendit_t> >&, bool, int, int, bool):\n ./src/mira/hashstats.C:2361\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr6, [pc, #352]\t@ (b5300 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x11168>)\n@@ -338554,29 +338555,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr2, #38\t@ 0x26\n+\tsubs\tr2, #50\t@ 0x32\n \tmovs\tr3, r6\n-\tsubs\tr2, #34\t@ 0x22\n+\tsubs\tr2, #46\t@ 0x2e\n \tmovs\tr3, r6\n-\tstr\tr0, [r4, r1]\n+\tstr\tr0, [r5, r1]\n \tmovs\tr5, r6\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #14\n \tmovs\tr0, r0\n-\tcbz\tr2, b5f44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x11dac>\n+\tcbz\tr6, b5f46 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x11dae>\n \tmovs\tr3, r6\n \tlsrs\tr4, r6, #21\n \tmovs\tr0, r0\n HashStatistics >::priv_arb_thread(unsigned int, HashStatistics >::arbs_threadsharecontrol_t*):\n ./src/mira/hashstats.C:2297\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/boost/thread/lock_types.hpp:336\n@@ -338793,29 +338794,29 @@\n \tb.n\tb6042 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x11eaa>\n \tstrb\tr4, [r0, #2]\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr4, [r7, #1]\n \tmovs\tr7, r7\n-\tadd\tr7, pc, #256\t@ (adr r7, b617c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x11fe4>)\n+\tadd\tr7, pc, #304\t@ (adr r7, b61ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x12014>)\n \tmovs\tr3, r6\n-\tadds\tr2, r0, r1\n+\tadds\tr6, r1, r1\n \tmovs\tr3, r6\n-\tadd\tr7, pc, #352\t@ (adr r7, b61e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1204c>)\n+\tadd\tr7, pc, #400\t@ (adr r7, b6214 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1207c>)\n \tmovs\tr3, r6\n \tldr\tr0, [r1, #124]\t@ 0x7c\n \tmovs\tr7, r7\n-\tadd\tr2, sp, #200\t@ 0xc8\n+\tadd\tr2, sp, #248\t@ 0xf8\n \tmovs\tr3, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #848\t@ 0x350\n+\tadd\tr7, sp, #896\t@ 0x380\n \tmovs\tr3, r6\n-\tadd\tr1, sp, #984\t@ 0x3d8\n+\tadd\tr2, sp, #8\n \tmovs\tr3, r6\n \tlsrs\tr0, r4, #1\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n std::vector >::hashstat_t, std::allocator >::hashstat_t> >, std::allocator >::hashstat_t, std::allocator >::hashstat_t> > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n@@ -339734,15 +339735,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\tb6792 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x125fa>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b6948 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x127b0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr4, #16\n+\tcmp\tr4, #28\n \tmovs\tr3, r6\n void std::vector >::hashstat_t, std::allocator >::hashstat_t> >::_M_realloc_insert >::hashstat_t const&>(__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, HashStatistics >::hashstat_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tldr\tr3, [r0, #0]\n \tsub\tsp, #28\n@@ -339958,15 +339959,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\tb6ab8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x12920>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b6b58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x129c0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tlsls\tr4, r2, #3\n+\tlsls\tr0, r4, #3\n \tmovs\tr3, r6\n void std::vector, std::allocator > >::_M_realloc_insert const&>(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, VLuint<256u> const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4227858432\t@ 0xfc000000\n \tldrd\tr7, r3, [r0]\n@@ -340239,15 +340240,15 @@\n \tstmia.w\tr4, {r0, r1, r2, r3}\n \tb.n\tb6bea , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x12a52>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b6e0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x12c74>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tmcr2\t0, 1, r0, cr0, cr2, {1}\n+\tmcr2\t0, 1, r0, cr12, cr2, {1}\n HashStatistics >::removeDustEndsFixed(unsigned char, unsigned int):\n ./src/mira/hashstats.C:1829\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n \tldr.w\tr6, [pc, #1600]\t@ b7458 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x132c0>\n \tvpush\t{d8-d9}\n \tsub\tsp, #212\t@ 0xd4\n@@ -343333,15 +343334,15 @@\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\tb8a2e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x14896>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (b8a58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x148c0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tlsrs\tr0, r0, #12\n+\tlsrs\tr4, r1, #12\n \tmovs\tr3, r6\n HashStatistics >::loadHashStatistics(HashStatistics >::mhsheader_t const&, gzFile_s*&):\n ./src/mira/hashstats.C:1446\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr5, r1\n \tldr\tr1, [pc, #908]\t@ (b8df0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x14c58>)\n \tldr\tr3, [pc, #908]\t@ (b8df4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x14c5c>)\n@@ -343824,39 +343825,39 @@\n \tb.n\tb8dd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x14c3c>\n \tadd\tr8, pc\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tsl, lr\n \tmovs\tr7, r7\n-\tstrh\tr6, [r2, #50]\t@ 0x32\n+\tstrh\tr2, [r4, #50]\t@ 0x32\n \tmovs\tr3, r6\n \tlsrs\tr0, r4, #18\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tbics\tr2, r6\n \tmovs\tr7, r7\n-\tstrh\tr0, [r5, #36]\t@ 0x24\n+\tstrh\tr4, [r6, #36]\t@ 0x24\n \tmovs\tr3, r6\n-\tstrh\tr0, [r4, #36]\t@ 0x24\n+\tstrh\tr4, [r5, #36]\t@ 0x24\n \tmovs\tr3, r6\n-\tadds\tr1, #40\t@ 0x28\n+\tadds\tr1, #48\t@ 0x30\n \tmovs\tr5, r6\n-\tstrh\tr0, [r1, #38]\t@ 0x26\n+\tstrh\tr4, [r2, #38]\t@ 0x26\n \tmovs\tr3, r6\n-\tstrh\tr2, [r7, #36]\t@ 0x24\n+\tstrh\tr6, [r0, #38]\t@ 0x26\n \tmovs\tr3, r6\n-\tstrh\tr4, [r6, #28]\n+\tstrh\tr0, [r0, #30]\n \tmovs\tr3, r6\n-\tstrh\tr6, [r7, #28]\n+\tstrh\tr2, [r1, #30]\n \tmovs\tr3, r6\n-\tstrh\tr2, [r2, #30]\n+\tstrh\tr6, [r3, #30]\n \tmovs\tr3, r6\n HashStatistics >::loadHashStatistics(gzFile_s*&):\n ./src/mira/hashstats.C:1427\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n \tldr\tr2, [pc, #88]\t@ (b8e90 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x14cf8>)\n \tsub\tsp, #68\t@ 0x44\n@@ -344091,33 +344092,33 @@\n \tb.n\tb8f6e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x14dd6>\n \tb.n\tb8fec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x14e54>\n \tnop\n \tlsrs\tr0, r0\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr0, [r4, #2]\n+\tstrh\tr4, [r5, #2]\n \tmovs\tr3, r6\n \tlsls\tr4, r4\n \tmovs\tr7, r7\n \tlsls\tr0, r0\n \tmovs\tr7, r7\n-\tstrh\tr2, [r2, #0]\n+\tstrh\tr6, [r3, #0]\n \tmovs\tr3, r6\n-\tstrh\tr0, [r2, #0]\n+\tstrh\tr4, [r3, #0]\n \tmovs\tr3, r6\n \tlsls\tr4, r4, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr6, [r5, #30]\n+\tldrb\tr2, [r7, #30]\n \tmovs\tr3, r6\n HashStatistics >::priv_trimHashVStatsByFrequencyAND(unsigned int, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1734\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr8, r3\n \tmov\tr6, r0\n ./src/mira/hashstats.C:1741\n@@ -345307,15 +345308,15 @@\n \tblx\tb6dc \n \tsubs\tr5, #88\t@ 0x58\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr3, #26\n \tmovs\tr7, r7\n-\tsmlatt\tr0, r6, r2, r0\n+\t\t\t@ instruction: 0xfb220032\n std::vector >::vhrap_t, std::allocator >::vhrap_t> >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\tb9bf6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x15a5e>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n@@ -345900,15 +345901,15 @@\n \tmovw\tr5, #65480\t@ 0xffc8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\tb9efc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x15d64>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (b9f30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x15d98>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\t\t\t@ instruction: 0xf6260032\n+\t\t\t@ instruction: 0xf6320032\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_arb_DoStuff(ReadPool&, unsigned int, std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned int, std::vector >::hsvbendit_t, std::allocator >::hsvbendit_t> >&, bool, int, int, bool):\n ./src/mira/hashstats.C:2361\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr6, [pc, #1120]\t@ ba3a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x16208>\n \tvpush\t{d8-d10}\n@@ -347896,27 +347897,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xeb9e0032\n-\t\t\t@ instruction: 0xeb980032\n-\tlsls\tr4, r2, #7\n+\tsub.w\tr0, sl, r2, rrx\n+\tsub.w\tr0, r4, r2, rrx\n+\tlsls\tr4, r3, #7\n \tmovs\tr5, r6\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #30\n \tmovs\tr0, r0\n-\tstr\tr6, [r5, #72]\t@ 0x48\n+\tstr\tr2, [r7, #72]\t@ 0x48\n \tmovs\tr3, r6\n \tlsrs\tr4, r2, #18\n \tmovs\tr0, r0\n HashStatistics >::priv_arb_thread(unsigned int, HashStatistics >::arbs_threadsharecontrol_t*):\n ./src/mira/hashstats.C:2297\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/boost/thread/lock_types.hpp:336\n@@ -348133,29 +348134,29 @@\n \tb.n\tbaf8a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x16df2>\n \tmovs\tr1, #60\t@ 0x3c\n \tmovs\tr7, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr1, #52\t@ 0x34\n \tmovs\tr7, r7\n-\tldrsb\tr0, [r7, r7]\n+\tldr\tr4, [r0, r0]\n \tmovs\tr3, r6\n-\tldmia\tr0!, {r1, r3, r4, r5, r6, r7}\n+\tldmia\tr1, {r1, r2}\n \tmovs\tr2, r6\n-\tldr\tr0, [r2, r0]\n+\tldr\tr4, [r3, r0]\n \tmovs\tr3, r6\n \tmovs\tr0, #128\t@ 0x80\n \tmovs\tr7, r7\n-\tldrh\tr2, [r5, r3]\n+\tldrh\tr6, [r6, r3]\n \tmovs\tr3, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tstr\tr4, [r1, #8]\n+\tstr\tr0, [r3, #8]\n \tmovs\tr3, r6\n-\tldrh\tr6, [r5, r2]\n+\tldrh\tr2, [r7, r2]\n \tmovs\tr3, r6\n \tlsrs\tr4, r1, #18\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n std::vector >::hashstat_t, std::allocator >::hashstat_t> >, std::allocator >::hashstat_t, std::allocator >::hashstat_t> > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n@@ -349074,15 +349075,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\tbb6da , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x17542>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (bb890 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x176f8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tbgt.n\tbb824 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1768c>\n+\tbgt.n\tbb83c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x176a4>\n \tmovs\tr2, r6\n void std::vector >::hashstat_t, std::allocator >::hashstat_t> >::_M_realloc_insert >::hashstat_t const&>(__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, HashStatistics >::hashstat_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr3, #36409\t@ 0x8e39\n \tmovt\tr3, #14563\t@ 0x38e3\n@@ -349322,15 +349323,15 @@\n \tadd.w\tr5, fp, #144\t@ 0x90\n \tblx\tb678 \n \tb.n\tbb922 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1778a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (bbac8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x17930>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tcbz\tr2, bbae4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1794c>\n+\tcbz\tr6, bbae6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1794e>\n \tmovs\tr2, r6\n void std::vector, std::allocator > >::_M_realloc_insert const&>(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, VLuint<512u> const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr\tr3, [r0, #0]\n \tsub\tsp, #36\t@ 0x24\n@@ -349547,15 +349548,15 @@\n \tmovw\tr4, #65472\t@ 0xffc0\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\tbbca2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x17b0a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (bbcc8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x17b30>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadd\tr7, sp, #392\t@ 0x188\n+\tadd\tr7, sp, #440\t@ 0x1b8\n \tmovs\tr2, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::removeDustEndsFixed(unsigned char, unsigned int):\n ./src/mira/hashstats.C:1829\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n@@ -356699,15 +356700,15 @@\n \tmovs\tr2, r6\n \tstr\tr6, [r5, #64]\t@ 0x40\n \tmovs\tr2, r6\n \tstr\tr6, [r4, #64]\t@ 0x40\n \tmovs\tr2, r6\n \tstr\tr6, [r3, #64]\t@ 0x40\n \tmovs\tr2, r6\n-\tstrb\tr2, [r2, #9]\n+\tstrb\tr6, [r3, #9]\n \tmovs\tr2, r6\n void __gnu_parallel::parallel_sort_mwms::hashstat_t*, std::vector::hashstat_t, std::allocator::hashstat_t> > >, bool (*)(HashStatistics::hashstat_t const&, HashStatistics::hashstat_t const&)>(__gnu_cxx::__normal_iterator::hashstat_t*, std::vector::hashstat_t, std::allocator::hashstat_t> > >, __gnu_cxx::__normal_iterator::hashstat_t*, std::vector::hashstat_t, std::allocator::hashstat_t> > >, bool (*)(HashStatistics::hashstat_t const&, HashStatistics::hashstat_t const&), unsigned short):\n /usr/include/c++/10/parallel/multiway_mergesort.h:395\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tsubs\tr1, r1, r0\n /usr/include/c++/10/parallel/multiway_mergesort.h:407\n@@ -357794,15 +357795,15 @@\n \tmovt\tsl, #4095\t@ 0xfff\n \tb.n\tbfd18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1bb80>\n /usr/include/c++/10/bits/stl_bvector.h:1321\n \tldr\tr0, [pc, #8]\t@ (c0254 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c0bc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tasrs\tr0, r4, #10\n+\tasrs\tr4, r5, #10\n \tmovs\tr3, r6\n boost::io::detail::stream_format_state >::apply_on(std::basic_ios >&, std::locale*) const:\n /usr/include/boost/format/internals.hpp:106\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r0\n \tldr\tr6, [pc, #196]\t@ (c0324 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c18c>)\n \tldr\tr0, [pc, #196]\t@ (c0328 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c190>)\n@@ -358086,15 +358087,15 @@\n \tbeq.n\tc03b2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c21a>\n \tb.n\tc03fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c264>\n /usr/include/c++/10/bits/basic_string.h:323\n \tldr\tr0, [pc, #8]\t@ (c0464 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c2cc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstrh\tr0, [r5, #52]\t@ 0x34\n+\tstrh\tr4, [r6, #52]\t@ 0x34\n \tmovs\tr2, r6\n boost::io::basic_altstringbuf, std::allocator >::clear_buffer():\n /usr/include/boost/format/alt_sstream_impl.hpp:21\n \tldr\tr2, [pc, #244]\t@ (c0560 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c3c8>)\n \tldr\tr3, [pc, #248]\t@ (c0564 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1c3cc>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, lr}\n@@ -359405,27 +359406,27 @@\n \tmovs\tr0, r0\n \tldmia\tr0!, {r1, r2, r4, r5}\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tlsls\tr4, r5, #28\n+\tlsls\tr0, r7, #28\n \tmovs\tr3, r6\n-\tlsrs\tr2, r2, #7\n+\tlsrs\tr6, r3, #7\n \tmovs\tr3, r6\n-\tlsrs\tr0, r7, #7\n+\tlsrs\tr4, r0, #8\n \tmovs\tr3, r6\n-\tldrb\tr0, [r3, #20]\n+\tldrb\tr4, [r4, #20]\n \tmovs\tr2, r6\n-\tlsls\tr0, r2, #28\n+\tlsls\tr4, r3, #28\n \tmovs\tr3, r6\n-\tlsrs\tr6, r6, #6\n+\tlsrs\tr2, r0, #7\n \tmovs\tr3, r6\n-\tlsrs\tr0, r4, #7\n+\tlsrs\tr4, r5, #7\n \tmovs\tr3, r6\n void boost::io::detail::distribute, std::allocator, boost::io::detail::put_holder > const&>(boost::basic_format, std::allocator >&, boost::io::detail::put_holder > const&):\n /usr/include/boost/format/feed_args.hpp:282\n \tldr\tr2, [pc, #252]\t@ (c0fc4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ce2c>)\n \tldr\tr3, [pc, #256]\t@ (c0fc8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ce30>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -361927,15 +361928,15 @@\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xb866\n \tmovs\tr6, r7\n \tsubs\tr4, #222\t@ 0xde\n \tmovs\tr2, r6\n \tsubs\tr4, #214\t@ 0xd6\n \tmovs\tr2, r6\n-\tstrb\tr2, [r7, #16]\n+\tstrb\tr6, [r0, #17]\n \tmovs\tr2, r6\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tldr\tr1, [sp, #24]\n \tmovw\tr5, #14247\t@ 0x37a7\n \tmovt\tr5, #59837\t@ 0xe9bd\n /usr/include/c++/10/bits/vector.tcc:587\n \tmovs\tr2, #92\t@ 0x5c\n@@ -362936,26 +362937,26 @@\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr2, sp, #272\t@ 0x110\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovw\tr0, #57394\t@ 0xe032\n-\t\t\t@ instruction: 0xf2140032\n-\trsbs\tr0, r2, #50\t@ 0x32\n-\tsub.w\tr0, sl, #50\t@ 0x32\n+\t\t\t@ instruction: 0xf25a0032\n+\t\t\t@ instruction: 0xf2200032\n+\trsbs\tr0, lr, #50\t@ 0x32\n+\tsubs.w\tr0, r6, #50\t@ 0x32\n \tlsrs\tr4, r4, #13\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf0f80032\n-\t\t\t@ instruction: 0xf0ae0032\n-\torns\tr0, r0, #50\t@ 0x32\n-\tand.w\tr0, sl, #50\t@ 0x32\n+\tadd.w\tr0, r4, #50\t@ 0x32\n+\t\t\t@ instruction: 0xf0ba0032\n+\torns\tr0, ip, #50\t@ 0x32\n+\tands.w\tr0, r6, #50\t@ 0x32\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr.w\tr0, [r5, #236]\t@ 0xec\n ./src/mira/hashstats.C:666 (discriminator 2)\n \tadd\tr0, r7\n \tldr\tr1, [r4, #0]\n ./src/mira/hashstats.C:665 (discriminator 2)\n \tadds\tr7, #12\n@@ -364067,17 +364068,17 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\tc319c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f004>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\tc3158 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1efc0>\n \tb.n\tc3160 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1efc8>\n \tnop\n-\tvqadd.s32\td0, d2, d18\n-\tvqadd.s32\td0, d12, d18\n-\tb.n\tc2d8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ebf4>\n+\tvqadd.s32\td0, d14, d18\n+\tvqadd.s64\td0, d8, d18\n+\tb.n\tc2da4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ec0c>\n \tmovs\tr2, r6\n \tlsrs\tr4, r6, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n@@ -364085,39 +364086,38 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr2, pc, #648\t@ (adr r2, c3470 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f2d8>)\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe9ac0032\n-\tldrd\tr0, r0, [sl, #-200]!\t@ 0xc8\n-\tstmia.w\tr4, {r1, r4, r5}\n+\t\t\t@ instruction: 0xe9b80032\n+\t\t\t@ instruction: 0xe9860032\n+\tldmia.w\tr0, {r1, r4, r5}\n \tlsrs\tr4, r6, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe8340032\n-\t\t\t@ instruction: 0xe8300032\n-\tb.n\tc32cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f134>\n+\tstrex\tr0, r0, [r0, #200]\t@ 0xc8\n+\t\t\t@ instruction: 0xe83c0032\n+\tb.n\tc32dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f144>\n \tmovs\tr5, r6\n \tcmp\tr5, #118\t@ 0x76\n \tmovs\tr2, r6\n-\tldrh\tr2, [r6, r1]\n+\tldrh\tr6, [r7, r1]\n \tmovs\tr2, r6\n-\tldrh\tr2, [r5, r1]\n+\tldrh\tr6, [r6, r1]\n \tmovs\tr2, r6\n \tcmp\tr5, #94\t@ 0x5e\n \tmovs\tr2, r6\n-\tudf\t#96\t@ 0x60\n-\tmovs\tr2, r6\n-\tb.n\tc321c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f084>\n+\tudf\t#108\t@ 0x6c\n \tmovs\tr2, r6\n+\t\t\t@ instruction: 0xe8060032\n HashStatistics >::prepareStreamHashStatistics(unsigned int, int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:502\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tip, r2\n \tldr\tr6, [pc, #416]\t@ (c33d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f238>)\n ./src/mira/hashstats.C:506\n \tmov\tr2, r1\n@@ -364348,15 +364348,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\tc2fe0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ee48>\n+\tb.n\tc2ff8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ee60>\n \tmovs\tr2, r6\n \tasrs\tr4, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -364893,33 +364893,33 @@\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [sp, #208]\t@ 0xd0\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\tc3ec8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fd30>\n+\tb.n\tc3ee0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fd48>\n \tmovs\tr2, r6\n-\tb.n\tc3e58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fcc0>\n+\tb.n\tc3e70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fcd8>\n \tmovs\tr2, r6\n-\tb.n\tc3dd8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fc40>\n+\tb.n\tc3df0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fc58>\n \tmovs\tr2, r6\n-\tb.n\tc3d8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fbf4>\n+\tb.n\tc3da4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fc0c>\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tb.n\tc3c34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fa9c>\n+\tb.n\tc3c4c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fab4>\n \tmovs\tr2, r6\n-\tb.n\tc3ba4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fa0c>\n+\tb.n\tc3bbc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fa24>\n \tmovs\tr2, r6\n-\tb.n\tc3b2c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f994>\n+\tb.n\tc3b44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f9ac>\n \tmovs\tr2, r6\n-\tb.n\tc3a64 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f8cc>\n+\tb.n\tc3a7c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1f8e4>\n \tmovs\tr2, r6\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr.w\tr0, [r5, #236]\t@ 0xec\n ./src/mira/hashstats.C:666 (discriminator 2)\n \tadd\tr0, r7\n \tldr\tr1, [r4, #0]\n ./src/mira/hashstats.C:665 (discriminator 2)\n@@ -366032,19 +366032,19 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\tc40ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ff14>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\tc4068 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fed0>\n \tb.n\tc4070 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fed8>\n \tnop\n-\tb.n\tc40fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ff64>\n-\tmovs\tr2, r6\n \tb.n\tc4114 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ff7c>\n \tmovs\tr2, r6\n-\tbvs.n\tc407c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fee4>\n+\tb.n\tc412c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ff94>\n+\tmovs\tr2, r6\n+\tbvs.n\tc4094 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fefc>\n \tmovs\tr2, r6\n \tlsrs\tr4, r6, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n@@ -366052,43 +366052,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr3, [sp, #584]\t@ 0x248\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tbge.n\tc4038 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fea0>\n+\tbge.n\tc4050 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1feb8>\n \tmovs\tr2, r6\n-\tbge.n\tc41d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20040>\n+\tbge.n\tc41f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20058>\n \tmovs\tr2, r6\n-\tbls.n\tc41f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20058>\n+\tbls.n\tc4008 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1fe70>\n \tmovs\tr2, r6\n \tlsrs\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbls.n\tc4160 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ffc8>\n+\tbls.n\tc4178 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ffe0>\n \tmovs\tr2, r6\n-\tbls.n\tc415c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ffc4>\n+\tbls.n\tc4174 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ffdc>\n \tmovs\tr2, r6\n-\tbne.n\tc41bc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20024>\n+\tbne.n\tc41cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20034>\n \tmovs\tr5, r6\n \tsubs\tr6, r4, #1\n \tmovs\tr2, r6\n-\tldr\tr3, [pc, #392]\t@ (c42b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20118>)\n+\tldr\tr3, [pc, #440]\t@ (c42e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20148>)\n \tmovs\tr2, r6\n-\tldr\tr3, [pc, #360]\t@ (c4294 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x200fc>)\n+\tldr\tr3, [pc, #408]\t@ (c42c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2012c>)\n \tmovs\tr2, r6\n \tsubs\tr6, r1, #1\n \tmovs\tr2, r6\n-\tldmia\tr7!, {r4, r6}\n+\tldmia\tr7!, {r2, r3, r4, r6}\n \tmovs\tr2, r6\n-\tbhi.n\tc410c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ff74>\n+\tbhi.n\tc4124 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1ff8c>\n \tmovs\tr2, r6\n HashStatistics >::prepareStreamHashStatistics(unsigned int, int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:502\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tip, r2\n \tldr\tr6, [pc, #416]\t@ (c42e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20148>)\n ./src/mira/hashstats.C:506\n@@ -366320,15 +366320,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbvs.n\tc42d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20138>\n+\tbvs.n\tc42e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20150>\n \tmovs\tr2, r6\n \tlsrs\tr0, r0, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -366865,33 +366865,33 @@\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r4, #32]\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbmi.n\tc47b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20620>\n+\tbmi.n\tc47d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20638>\n \tmovs\tr2, r6\n-\tbcc.n\tc4748 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x205b0>\n+\tbmi.n\tc4760 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x205c8>\n \tmovs\tr2, r6\n-\tbcc.n\tc46c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20530>\n+\tbcc.n\tc46e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20548>\n \tmovs\tr2, r6\n-\tbcc.n\tc467c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x204e4>\n+\tbcc.n\tc4694 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x204fc>\n \tmovs\tr2, r6\n \tasrs\tr4, r5, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbcs.n\tc4724 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2058c>\n+\tbcs.n\tc473c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x205a4>\n \tmovs\tr2, r6\n-\tbcs.n\tc4694 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x204fc>\n+\tbcs.n\tc46ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20514>\n \tmovs\tr2, r6\n-\tbcs.n\tc481c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20684>\n+\tbcs.n\tc4834 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2069c>\n \tmovs\tr2, r6\n-\tbne.n\tc4754 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x205bc>\n+\tbne.n\tc476c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x205d4>\n \tmovs\tr2, r6\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr.w\tr0, [r5, #236]\t@ 0xec\n ./src/mira/hashstats.C:666 (discriminator 2)\n \tadd\tr0, r7\n \tldr\tr1, [r4, #0]\n ./src/mira/hashstats.C:665 (discriminator 2)\n@@ -368004,19 +368004,19 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\tc4fbc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20e24>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\tc4f78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20de0>\n \tb.n\tc4f80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20de8>\n \tnop\n-\tbne.n\tc4fec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20e54>\n-\tmovs\tr2, r6\n \tbne.n\tc5004 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20e6c>\n \tmovs\tr2, r6\n-\tstmia\tr7!, {r1, r2, r3, r4, r5, r7}\n+\tbne.n\tc501c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x20e84>\n+\tmovs\tr2, r6\n+\tstmia\tr7!, {r1, r3, r6, r7}\n \tmovs\tr2, r6\n \tlsrs\tr4, r6, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n@@ -368024,43 +368024,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr2, [r0, #36]\t@ 0x24\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldmia\tr3, {r2, r3, r7}\n+\tldmia\tr3, {r3, r4, r7}\n \tmovs\tr2, r6\n-\tldmia\tr3, {r1, r3, r4, r6}\n+\tldmia\tr3!, {r1, r2, r5, r6}\n \tmovs\tr2, r6\n-\tldmia\tr2, {r2, r5, r6}\n+\tldmia\tr2!, {r4, r5, r6}\n \tmovs\tr2, r6\n \tlsls\tr4, r0, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr2, {r2, r4}\n+\tldmia\tr2!, {r5}\n \tmovs\tr2, r6\n-\tldmia\tr2!, {r4}\n+\tldmia\tr2, {r2, r3, r4}\n \tmovs\tr2, r6\n-\tstmia\tr2!, {r1, r2, r3, r4, r5}\n+\tstmia\tr2!, {r1, r2, r6}\n \tmovs\tr5, r6\n \tlsrs\tr6, r2, #29\n \tmovs\tr2, r6\n-\tsubs\tr4, #82\t@ 0x52\n+\tsubs\tr4, #94\t@ 0x5e\n \tmovs\tr2, r6\n-\tsubs\tr4, #74\t@ 0x4a\n+\tsubs\tr4, #86\t@ 0x56\n \tmovs\tr2, r6\n \tlsrs\tr6, r7, #28\n \tmovs\tr2, r6\n-\tstmia\tr0!, {r6}\n+\tstmia\tr0!, {r2, r3, r6}\n \tmovs\tr2, r6\n-\tldmia\tr1, {r1, r3, r4, r6, r7}\n+\tldmia\tr1, {r1, r2, r5, r6, r7}\n \tmovs\tr2, r6\n HashStatistics >::prepareStreamHashStatistics(unsigned int, int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:502\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tip, r2\n \tldr\tr6, [pc, #416]\t@ (c51f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21058>)\n ./src/mira/hashstats.C:506\n@@ -368292,15 +368292,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r2, r4, r6, r7}\n+\tstmia\tr7!, {r5, r6, r7}\n \tmovs\tr2, r6\n \tlsrs\tr0, r1, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -368835,33 +368835,33 @@\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr4, [r2, #20]\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r1, r2, r3, r4}\n+\tstmia\tr5!, {r1, r3, r5}\n \tmovs\tr2, r6\n-\tstmia\tr4!, {r2, r5, r6, r7}\n+\tstmia\tr4!, {r4, r5, r6, r7}\n \tmovs\tr2, r6\n-\tstmia\tr4!, {r1, r5, r7}\n+\tstmia\tr4!, {r1, r2, r3, r5, r7}\n \tmovs\tr2, r6\n-\tstmia\tr4!, {r1, r3, r4, r5, r6}\n+\tstmia\tr4!, {r1, r2, r7}\n \tmovs\tr2, r6\n \tlsls\tr0, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r2, r4, r6, r7}\n+\tstmia\tr3!, {r5, r6, r7}\n \tmovs\tr2, r6\n-\tstmia\tr3!, {r1, r3, r7}\n+\tstmia\tr3!, {r1, r2, r4, r7}\n \tmovs\tr2, r6\n-\tstmia\tr3!, {r2, r3, r6}\n+\tstmia\tr3!, {r3, r4, r6}\n \tmovs\tr2, r6\n-\tstmia\tr2!, {r1, r2, r5, r6, r7}\n+\tstmia\tr2!, {r1, r4, r5, r6, r7}\n \tmovs\tr2, r6\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr.w\tr0, [r5, #236]\t@ 0xec\n ./src/mira/hashstats.C:666 (discriminator 2)\n \tadd\tr0, r7\n \tldr\tr1, [r4, #0]\n ./src/mira/hashstats.C:665 (discriminator 2)\n@@ -369975,19 +369975,19 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\tc5ec4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21d2c>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\tc5e80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21ce8>\n \tb.n\tc5e88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21cf0>\n \tnop\n-\tstmia\tr1!, {r1, r3, r4, r5, r6, r7}\n+\tstmia\tr2!, {r1, r2}\n \tmovs\tr2, r6\n-\tstmia\tr2!, {r2}\n+\tstmia\tr2!, {r4}\n \tmovs\tr2, r6\n-\t\t\t@ instruction: 0xb8b6\n+\t\t\t@ instruction: 0xb8c2\n \tmovs\tr2, r6\n \tlsrs\tr4, r6, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n@@ -369995,43 +369995,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr2, [r7, #21]\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tpop\t{r2, r7}\n+\tpop\t{r4, r7}\n \tmovs\tr2, r6\n-\tpop\t{r4, r6}\n+\tpop\t{r2, r3, r4, r6}\n \tmovs\tr2, r6\n-\tcbnz\tr2, c5f76 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21dde>\n+\tcbnz\tr6, c5f78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21de0>\n \tmovs\tr2, r6\n \tlsrs\tr4, r6, #7\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcbnz\tr2, c5f72 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21dda>\n-\tmovs\tr2, r6\n \tcbnz\tr6, c5f74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21ddc>\n \tmovs\tr2, r6\n-\tcbz\tr4, c5f84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21dec>\n+\tcbnz\tr2, c5f78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21de0>\n+\tmovs\tr2, r6\n+\tcbz\tr4, c5f86 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21dee>\n \tmovs\tr5, r6\n \tlsls\tr6, r1, #1\n \tmovs\tr2, r6\n-\tcmp\tr5, #74\t@ 0x4a\n+\tcmp\tr5, #86\t@ 0x56\n \tmovs\tr2, r6\n-\tcmp\tr5, #66\t@ 0x42\n+\tcmp\tr5, #78\t@ 0x4e\n \tmovs\tr2, r6\n \tmovs\tr6, r6\n \tmovs\tr2, r6\n-\tcbz\tr0, c5f5a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21dc2>\n+\tcbz\tr4, c5f5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21dc4>\n \tmovs\tr2, r6\n-\trevsh\tr2, r2\n+\trevsh\tr6, r3\n \tmovs\tr2, r6\n HashStatistics::prepareStreamHashStatistics(unsigned int, int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:502\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tip, r2\n \tldr\tr6, [pc, #416]\t@ (c60f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x21f60>)\n ./src/mira/hashstats.C:506\n@@ -370263,15 +370263,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb8cc\n+\t\t\t@ instruction: 0xb8d8\n \tmovs\tr2, r6\n \tlsrs\tr4, r0, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -372511,15 +372511,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldrb\tr6, [r4, r3]\n \tmovs\tr6, r7\n \tlsrs\tr0, r5, #14\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #680\t@ (adr r6, c7548 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x233b0>)\n+\tadd\tr6, pc, #728\t@ (adr r6, c7578 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x233e0>)\n \tmovs\tr2, r6\n HashStatistics::priv_makeHashStatArrayShortcuts():\n ./src/mira/hashstats.C:2169\n \tldr\tr2, [pc, #868]\t@ (c7608 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x23470>)\n \tldr\tr3, [pc, #872]\t@ (c760c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x23474>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -372970,15 +372970,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #936\t@ (adr r3, c79d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x23840>)\n+\tadd\tr3, pc, #984\t@ (adr r3, c7a08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x23870>)\n \tmovs\tr2, r6\n \tlsrs\tr4, r5, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -373451,33 +373451,33 @@\n \tmovs\tr0, r0\n \tldrsb\tr0, [r0, r6]\n \tmovs\tr6, r7\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr2, [r4, #26]\n+\tstrb\tr6, [r5, #26]\n \tmovs\tr2, r6\n-\tstrb\tr6, [r1, #26]\n+\tstrb\tr2, [r3, #26]\n \tmovs\tr2, r6\n-\tstrb\tr4, [r0, #26]\n+\tstrb\tr0, [r2, #26]\n \tmovs\tr2, r6\n-\tstrb\tr0, [r0, #26]\n+\tstrb\tr4, [r1, #26]\n \tmovs\tr2, r6\n-\tstrb\tr6, [r3, #23]\n+\tstrb\tr2, [r5, #23]\n \tmovs\tr2, r6\n-\tstrb\tr0, [r6, #23]\n+\tstrb\tr4, [r7, #23]\n \tmovs\tr2, r6\n \tlsrs\tr4, r2, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr4, [r4, #23]\n+\tstrb\tr0, [r6, #23]\n \tmovs\tr2, r6\n HashStatistics::findVHash(HashStatistics::hashstat_t const&):\n ./src/mira/hashstats.C:2980\n \tldr\tr2, [pc, #616]\t@ (c7c54 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x23abc>)\n \tldr\tr3, [pc, #620]\t@ (c7c58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x23ac0>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -373818,15 +373818,15 @@\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r4, r5]\n \tmovs\tr6, r7\n \tstrb\tr0, [r0, r0]\n \tmovs\tr6, r7\n-\tldr\tr5, [sp, #600]\t@ 0x258\n+\tldr\tr5, [sp, #648]\t@ 0x288\n \tmovs\tr2, r6\n \tlsrs\tr4, r5, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -374284,17 +374284,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #392]\t@ 0x188\n+\tldr\tr2, [sp, #440]\t@ 0x1b8\n \tmovs\tr2, r6\n-\tldr\tr2, [sp, #400]\t@ 0x190\n+\tldr\tr2, [sp, #448]\t@ 0x1c0\n \tmovs\tr2, r6\n \tlsrs\tr0, r4, #16\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -375029,17 +375029,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #88]\t@ 0x58\n+\tstr\tr5, [sp, #136]\t@ 0x88\n \tmovs\tr2, r6\n-\tstr\tr5, [sp, #96]\t@ 0x60\n+\tstr\tr5, [sp, #144]\t@ 0x90\n \tmovs\tr2, r6\n \tlsrs\tr0, r6, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -375063,15 +375063,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldr\tr0, [pc, #776]\t@ (c89c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2482c>)\n \tmovs\tr6, r7\n \tlsrs\tr4, r0, #15\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #56]\t@ 0x38\n+\tstr\tr3, [sp, #104]\t@ 0x68\n \tmovs\tr2, r6\n HashStatistics::priv_sortByCountUp(std::vector::hashstat_t, std::allocator::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:252\n \tldr\tr3, [pc, #28]\t@ (c86e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2454c>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:254\n \tldr\tr4, [pc, #28]\t@ (c86e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x24550>)\n@@ -375089,15 +375089,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldr\tr0, [pc, #600]\t@ (c8940 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x247a8>)\n \tmovs\tr6, r7\n \tlsrs\tr4, r6, #1\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #1000]\t@ 0x3e8\n+\tstr\tr3, [sp, #24]\n \tmovs\tr2, r6\n HashStatistics::priv_calcAvgHashFreq(bool):\n ./src/mira/hashstats.C:1494\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n ./src/mira/../../src/mira/hashstats.H:461\n \tadd.w\tr8, r0, #152\t@ 0x98\n@@ -375623,37 +375623,37 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tldr\tr0, [pc, #280]\t@ (c8c18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x24a80>)\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #264]\t@ 0x108\n+\tstr\tr2, [sp, #312]\t@ 0x138\n \tmovs\tr2, r6\n-\tstr\tr2, [sp, #16]\n+\tstr\tr2, [sp, #64]\t@ 0x40\n \tmovs\tr2, r6\n-\tpush\t{r3, r6}\n+\tpush\t{r4, r6}\n \tmovs\tr5, r6\n-\tstr\tr1, [sp, #672]\t@ 0x2a0\n+\tstr\tr1, [sp, #720]\t@ 0x2d0\n \tmovs\tr2, r6\n-\tstr\tr1, [sp, #600]\t@ 0x258\n+\tstr\tr1, [sp, #648]\t@ 0x288\n \tmovs\tr2, r6\n-\tstr\tr1, [sp, #400]\t@ 0x190\n+\tstr\tr1, [sp, #448]\t@ 0x1c0\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #672]\t@ 0x2a0\n+\tstr\tr0, [sp, #720]\t@ 0x2d0\n \tmovs\tr2, r6\n-\tstr\tr0, [sp, #224]\t@ 0xe0\n+\tstr\tr0, [sp, #272]\t@ 0x110\n \tmovs\tr2, r6\n-\tsxtb\tr0, r3\n+\tsxtb\tr0, r4\n \tmovs\tr5, r6\n-\tldrh\tr2, [r7, #60]\t@ 0x3c\n+\tldrh\tr6, [r0, #62]\t@ 0x3e\n \tmovs\tr2, r6\n-\tldrh\tr4, [r4, #60]\t@ 0x3c\n+\tldrh\tr0, [r6, #60]\t@ 0x3c\n \tmovs\tr2, r6\n HashStatistics::priv_sortByCountDown(std::vector::hashstat_t, std::allocator::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:258\n \tldr\tr3, [pc, #28]\t@ (c8b54 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x249bc>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:260\n \tldr\tr4, [pc, #28]\t@ (c8b58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x249c0>)\n@@ -375671,15 +375671,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tadd\tr6, r4\n \tmovs\tr6, r7\n \tlsls\tr4, r2, #26\n \tmovs\tr0, r0\n-\tldrh\tr6, [r0, #56]\t@ 0x38\n+\tldrh\tr2, [r2, #56]\t@ 0x38\n \tmovs\tr2, r6\n HashStatistics::priv_sortLexByCount(std::vector::hashstat_t, std::allocator::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:264\n \tldr\tr3, [pc, #28]\t@ (c8b80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x249e8>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:266\n \tldr\tr4, [pc, #28]\t@ (c8b84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x249ec>)\n@@ -375697,15 +375697,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tmvns\tr2, r7\n \tmovs\tr6, r7\n \tlsrs\tr4, r7, #2\n \tmovs\tr0, r0\n-\tldrh\tr2, [r5, #54]\t@ 0x36\n+\tldrh\tr6, [r6, #54]\t@ 0x36\n \tmovs\tr2, r6\n HashStatistics::priv_compressHashStatBufferInPlace(std::vector::hashstat_t, std::allocator::hashstat_t> >&, unsigned int):\n ./src/mira/hashstats.C:940\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr\tr3, [pc, #548]\t@ (c8db8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x24c20>)\n \tsub\tsp, #60\t@ 0x3c\n@@ -376204,15 +376204,15 @@\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsbcs\tr2, r1\n \tmovs\tr6, r7\n \tadcs\tr6, r0\n \tmovs\tr6, r7\n-\tldrh\tr4, [r0, #32]\n+\tldrh\tr0, [r2, #32]\n \tmovs\tr2, r6\n \tlsrs\tr4, r7, #18\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -377125,51 +377125,51 @@\n \tmovs\tr6, r7\n \tasrs\tr4, r0, #2\n \tmovs\tr0, r0\n \tsubs\tr6, #78\t@ 0x4e\n \tmovs\tr6, r7\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n-\tstrh\tr0, [r2, #60]\t@ 0x3c\n+\tstrh\tr4, [r3, #60]\t@ 0x3c\n \tmovs\tr2, r6\n \tlsrs\tr0, r1, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr0, [r5, #56]\t@ 0x38\n+\tstrh\tr4, [r6, #56]\t@ 0x38\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr0, [r5, r4]\n+\tldrh\tr4, [r6, r4]\n \tmovs\tr2, r6\n-\tldrh\tr4, [r2, r4]\n+\tldrh\tr0, [r4, r4]\n \tmovs\tr2, r6\n-\tldrh\tr2, [r1, r4]\n+\tldrh\tr6, [r2, r4]\n \tmovs\tr2, r6\n-\tldrh\tr0, [r1, r4]\n+\tldrh\tr4, [r2, r4]\n \tmovs\tr2, r6\n-\tldrh\tr2, [r7, r2]\n+\tldrh\tr6, [r0, r3]\n \tmovs\tr2, r6\n-\tldrh\tr6, [r4, r2]\n+\tldrh\tr2, [r6, r2]\n \tmovs\tr2, r6\n-\tldrh\tr4, [r3, r2]\n+\tldrh\tr0, [r5, r2]\n \tmovs\tr2, r6\n-\tldrh\tr2, [r3, r2]\n+\tldrh\tr6, [r4, r2]\n \tmovs\tr2, r6\n-\tldrh\tr2, [r0, r0]\n+\tldrh\tr6, [r1, r0]\n \tmovs\tr2, r6\n-\tldrh\tr2, [r2, r0]\n+\tldrh\tr6, [r3, r0]\n \tmovs\tr2, r6\n-\tldr\tr0, [r0, r6]\n+\tldr\tr4, [r1, r6]\n \tmovs\tr2, r6\n-\tldr\tr0, [r2, r6]\n+\tldr\tr4, [r3, r6]\n \tmovs\tr2, r6\n-\tldr\tr6, [r0, r6]\n+\tldr\tr2, [r2, r6]\n \tmovs\tr2, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics::priv_hashes2disk(ReadPool&, bool, bool, bool, unsigned int):\n ./src/mira/hashstats.C:708\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n@@ -377556,37 +377556,37 @@\n \tmovs\tr0, r0\n \tsubs\tr0, #216\t@ 0xd8\n \tmovs\tr6, r7\n \tsubs\tr0, #206\t@ 0xce\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [r2, #96]\t@ 0x60\n+\tldr\tr2, [r3, #96]\t@ 0x60\n \tmovs\tr3, r6\n-\tmovs\tr1, #0\n+\tmovs\tr1, #8\n \tmovs\tr4, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr0, [r5, r0]\n+\tldr\tr4, [r6, r0]\n \tmovs\tr2, r6\n-\tldrsb\tr2, [r1, r7]\n+\tldrsb\tr6, [r2, r7]\n \tmovs\tr2, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr2, [r0, #64]\t@ 0x40\n+\tldr\tr2, [r1, #64]\t@ 0x40\n \tmovs\tr3, r6\n-\tsubs\tr4, r5, #3\n+\tsubs\tr4, r6, #3\n \tmovs\tr4, r6\n-\tldrsb\tr2, [r6, r1]\n+\tldrsb\tr6, [r7, r1]\n \tmovs\tr2, r6\n-\tldrsb\tr2, [r4, r0]\n+\tldrsb\tr6, [r5, r0]\n \tmovs\tr2, r6\n \tadds\tr6, #0\n \tmovs\tr6, r7\n-\tstrh\tr0, [r4, #10]\n+\tstrh\tr4, [r5, #10]\n \tmovs\tr2, r6\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tfp, [pc, #932]\t@ c9d80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x25be8>\n \tadd.w\tr9, sp, #144\t@ 0x90\n \tmov\tr0, r9\n \tmov.w\tsl, #0\n \tblx\tbcc4 \n@@ -378054,27 +378054,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa7c0031\n-\t\t\t@ instruction: 0xfa780031\n-\tasrs\tr6, r6, #2\n+\t\t\t@ instruction: 0xfa880031\n+\t\t\t@ instruction: 0xfa840031\n+\tasrs\tr6, r7, #2\n \tmovs\tr4, r6\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n+\tvst1.8\t\t\t@ instruction: 0xf9880031\n \tldr??.w\tr0, [ip, r1, lsl #3]\n-\tldr??.w\tr0, [r0, r1, lsl #3]\n-\tmovs\tr1, #64\t@ 0x40\n+\tmovs\tr1, #72\t@ 0x48\n \tmovs\tr4, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics::priv_createHashStatisticsFile(std::__cxx11::basic_string, std::allocator > const&, std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::vector >&, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1090\n@@ -378670,35 +378670,35 @@\n \tmovs\tr0, r0\n \tadds\tr1, #136\t@ 0x88\n \tmovs\tr6, r7\n \tadds\tr1, #118\t@ 0x76\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr4, [r5, #16]\n+\tldrb\tr0, [r7, #16]\n \tmovs\tr2, r6\n-\tstrb\tr4, [r5, #1]\n+\tstrb\tr0, [r7, #1]\n \tmovs\tr2, r6\n-\tstr\tr4, [r7, #84]\t@ 0x54\n+\tstr\tr4, [r0, #88]\t@ 0x58\n \tmovs\tr3, r6\n-\tadds\tr2, r5, r1\n+\tadds\tr2, r6, r1\n \tmovs\tr4, r6\n-\tldr\tr7, [pc, #944]\t@ (ca648 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x264b0>)\n+\tldr\tr7, [pc, #992]\t@ (ca678 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x264e0>)\n \tmovs\tr2, r6\n-\tldrb\tr4, [r5, #14]\n+\tldrb\tr0, [r7, #14]\n \tmovs\tr2, r6\n-\tldr\tr4, [r5, #108]\t@ 0x6c\n+\tldr\tr0, [r7, #108]\t@ 0x6c\n \tmovs\tr2, r6\n-\tldrb\tr0, [r7, #13]\n+\tldrb\tr4, [r0, #14]\n \tmovs\tr2, r6\n-\tldrb\tr2, [r6, #7]\n+\tldrb\tr6, [r7, #7]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #240]\t@ (ca3a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26208>)\n+\tldr\tr5, [pc, #288]\t@ (ca3d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26238>)\n \tmovs\tr2, r6\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, sl\n \tblx\tb51c ::_M_widen_init() const@plt>\n /usr/include/c++/10/bits/locale_facets.h:877\n \tldr.w\tlr, [pc, #840]\t@ ca600 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26468>\n \tldr\tr3, [sp, #28]\n@@ -379112,35 +379112,35 @@\n \tnop\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr6, [r6, #24]\n+\tstr\tr6, [r7, #24]\n \tmovs\tr3, r6\n-\tasrs\tr4, r4, #18\n+\tasrs\tr4, r5, #18\n \tmovs\tr4, r6\n-\tldr\tr4, [pc, #168]\t@ (ca6b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26520>)\n+\tldr\tr4, [pc, #216]\t@ (ca6e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26550>)\n \tmovs\tr2, r6\n-\tldr\tr3, [pc, #872]\t@ (ca97c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x267e4>)\n+\tldr\tr3, [pc, #920]\t@ (ca9ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26814>)\n \tmovs\tr2, r6\n-\tldrb\tr6, [r5, #1]\n+\tldrb\tr2, [r7, #1]\n \tmovs\tr2, r6\n-\tb.n\tca9d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26840>\n+\tb.n\tca9e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26850>\n \tmovs\tr6, r6\n-\tldrb\tr0, [r1, #2]\n+\tldrb\tr4, [r2, #2]\n \tmovs\tr2, r6\n-\tldrb\tr6, [r2, #1]\n+\tldrb\tr2, [r4, #1]\n \tmovs\tr2, r6\n-\tldrb\tr4, [r3, #0]\n+\tldrb\tr0, [r5, #0]\n \tmovs\tr2, r6\n-\tstrb\tr6, [r3, #31]\n+\tstrb\tr2, [r5, #31]\n \tmovs\tr2, r6\n-\tstrb\tr0, [r4, #30]\n+\tstrb\tr4, [r5, #30]\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr1, #240\t@ 0xf0\n \tmovs\tr6, r7\n /usr/include/c++/10/bits/locale_facets.h:876\n \tldr.w\tsl, [pc, #1136]\t@ caaac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26914>\n@@ -379735,43 +379735,43 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\tcaa2a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26892>\n \tb.n\tcaa3a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x268a2>\n \tb.n\tcaa2a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26892>\n \tb.n\tcaa3a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x268a2>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstrb\tr0, [r3, #16]\n+\tstrb\tr4, [r4, #16]\n \tmovs\tr2, r6\n \tlsrs\tr4, r3, #10\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr0, [r5, #120]\t@ 0x78\n+\tstr\tr4, [r6, #120]\t@ 0x78\n \tmovs\tr2, r6\n-\tstrb\tr2, [r5, #15]\n+\tstrb\tr6, [r6, #15]\n \tmovs\tr2, r6\n-\tldr\tr6, [r7, #16]\n+\tldr\tr2, [r1, #20]\n \tmovs\tr2, r6\n-\tstrb\tr2, [r0, #15]\n+\tstrb\tr6, [r1, #15]\n \tmovs\tr2, r6\n-\tstrb\tr0, [r6, #14]\n+\tstrb\tr4, [r7, #14]\n \tmovs\tr2, r6\n-\tstrb\tr2, [r5, #14]\n+\tstrb\tr6, [r6, #14]\n \tmovs\tr2, r6\n-\tstr\tr4, [r2, #84]\t@ 0x54\n+\tstr\tr0, [r4, #84]\t@ 0x54\n \tmovs\tr2, r6\n-\tstr\tr2, [r4, #92]\t@ 0x5c\n+\tstr\tr6, [r5, #92]\t@ 0x5c\n \tmovs\tr2, r6\n-\tstrb\tr2, [r2, #7]\n+\tstrb\tr6, [r3, #7]\n \tmovs\tr2, r6\n-\tstr\tr2, [r4, #84]\t@ 0x54\n+\tstr\tr6, [r5, #84]\t@ 0x54\n \tmovs\tr2, r6\n-\tstrb\tr2, [r5, #9]\n+\tstrb\tr6, [r6, #9]\n \tmovs\tr2, r6\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics::prepareStreamFinalise(unsigned int, unsigned int):\n ./src/mira/hashstats.C:522\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n@@ -380231,40 +380231,40 @@\n \teors\tr1, r3\n \tmovs\tr1, r0\n \tmovs\tr0, r0\n \tmovs\tr4, #96\t@ 0x60\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr6, [r2, #7]\n+\tstrb\tr2, [r4, #7]\n \tmovs\tr2, r6\n-\tldr\tr6, [r0, r6]\n+\tldr\tr6, [r1, r6]\n \tmovs\tr3, r6\n-\tlsrs\tr0, r6, #17\n+\tlsrs\tr0, r7, #17\n \tmovs\tr4, r6\n-\tmvns\tr4, r6\n+\tadd\tr0, r0\n \tmovs\tr2, r6\n-\tmuls\tr6, r1\n+\tmuls\tr2, r3\n \tmovs\tr2, r6\n-\tldrsb\tr4, [r7, r7]\n+\tldr\tr4, [r0, r0]\n \tmovs\tr3, r6\n-\tlsrs\tr2, r5, #11\n+\tlsrs\tr2, r6, #11\n \tmovs\tr4, r6\n-\tnegs\tr0, r6\n+\tnegs\tr4, r7\n \tmovs\tr2, r6\n-\ttst\tr0, r4\n+\ttst\tr4, r5\n \tmovs\tr2, r6\n-\tstrex\tr0, r0, [sl, #196]\t@ 0xc4\n-\tldr\tr6, [r2, #120]\t@ 0x78\n+\t\t\t@ instruction: 0xe8560031\n+\tldr\tr2, [r4, #120]\t@ 0x78\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr0, [r5, #104]\t@ 0x68\n+\tldr\tr4, [r6, #104]\t@ 0x68\n \tmovs\tr2, r6\n-\tbvc.n\tcaff0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26e58>\n+\tbvc.n\tcae00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26c68>\n \tmovs\tr2, r6\n HashStatistics::computeHashStatistics(ReadPool&, int, bool, bool, bool, unsigned int, unsigned int, unsigned int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:350\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r3\n \tldr\tr5, [pc, #520]\t@ (cb104 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x26f6c>)\n ./src/mira/hashstats.C:354\n@@ -380536,15 +380536,15 @@\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr0, #34\t@ 0x22\n \tmovs\tr6, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [r6, #92]\t@ 0x5c\n+\tldr\tr2, [r0, #96]\t@ 0x60\n \tmovs\tr2, r6\n \tsubs\tr4, r5, #7\n \tmovs\tr6, r7\n \tsubs\tr2, r1, #7\n \tmovs\tr6, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -380552,15 +380552,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr4, [r6, #8]\n+\tldr\tr0, [r0, #12]\n \tmovs\tr2, r6\n \tlsrs\tr0, r7, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -381177,21 +381177,21 @@\n \tmovs\tr6, r7\n \tadds\tr0, r6, #7\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr6, [r1, #52]\t@ 0x34\n+\tldr\tr2, [r3, #52]\t@ 0x34\n \tmovs\tr2, r6\n-\tldr\tr4, [r5, #48]\t@ 0x30\n+\tldr\tr0, [r7, #48]\t@ 0x30\n \tmovs\tr2, r6\n-\tldr\tr0, [r0, #48]\t@ 0x30\n+\tldr\tr4, [r1, #48]\t@ 0x30\n \tmovs\tr2, r6\n-\tbvc.n\tcb664 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x274cc>\n+\tbvc.n\tcb674 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x274dc>\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n ./src/mira/hashstats.C:458\n \tmov\tr0, r5\n@@ -381653,29 +381653,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpush\t{r2, r3, r4, r6, r7}\n+\tpush\t{r3, r5, r6, r7}\n \tmovs\tr1, r6\n-\tpush\t{r1, r3, r4, r6, r7}\n+\tpush\t{r1, r2, r5, r6, r7}\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tbgt.n\tcb908 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27770>\n+\tbgt.n\tcb920 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27788>\n \tmovs\tr1, r6\n-\tbgt.n\tcb8f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2775c>\n+\tbgt.n\tcb90c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27774>\n \tmovs\tr1, r6\n-\tlsls\tr4, r2, #18\n+\tlsls\tr4, r3, #18\n \tmovs\tr4, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr5, [sp, #88]\t@ 0x58\n@@ -382268,29 +382268,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsub\tsp, #192\t@ 0xc0\n+\tsub\tsp, #240\t@ 0xf0\n \tmovs\tr1, r6\n-\tsub\tsp, #184\t@ 0xb8\n+\tsub\tsp, #232\t@ 0xe8\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tbhi.n\tcbd44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27bac>\n+\tbhi.n\tcbd5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27bc4>\n \tmovs\tr1, r6\n-\tbhi.n\tcbd30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27b98>\n+\tbhi.n\tcbd48 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27bb0>\n \tmovs\tr1, r6\n-\tlsls\tr2, r5, #1\n+\tlsls\tr2, r6, #1\n \tmovs\tr4, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, r6\n@@ -382755,31 +382755,31 @@\n \tb.n\tcbfbe , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27e26>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\tcc014 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27e7c>\n \tb.n\tcc01e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27e86>\n \tb.n\tcc024 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27e8c>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrsh\tr2, [r4, r4]\n+\tldrsh\tr6, [r5, r4]\n \tmovs\tr2, r6\n-\tldrsh\tr0, [r0, r5]\n+\tldrsh\tr4, [r1, r5]\n \tmovs\tr2, r6\n \tlsrs\tr0, r5, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr3, {r2, r3, r5, r6, r7}\n+\tldmia\tr3, {r3, r4, r5, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr3!, {r2, r5, r6, r7}\n+\tldmia\tr3!, {r4, r5, r6, r7}\n \tmovs\tr1, r6\n-\tldrsh\tr4, [r7, r0]\n+\tldrsh\tr0, [r1, r1]\n \tmovs\tr2, r6\n-\tadd\tr4, sp, #488\t@ 0x1e8\n+\tadd\tr4, sp, #536\t@ 0x218\n \tmovs\tr1, r6\n HashStatistics::priv_sortMaskUp(std::vector::hashstat_t, std::allocator::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:270\n \tpush\t{r4, lr}\n \tldr.w\tip, [pc, #40]\t@ cc190 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x27ff8>\n \tsub\tsp, #8\n \tadd\tip, pc\n@@ -382800,15 +382800,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tlsrs\tr4, r6, #23\n \tmovs\tr6, r7\n \tlsrs\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr4, [r1, r2]\n+\tldrb\tr0, [r3, r2]\n \tmovs\tr2, r6\n HashStatistics::calcKMerForks(unsigned int, bool):\n ./src/mira/hashstats.C:2001\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr.w\tlr, [pc, #796]\t@ cc4c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x28328>\n /usr/include/c++/10/bits/stl_iterator.h:979\n@@ -383172,19 +383172,19 @@\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tlsrs\tr6, r6, #22\n \tmovs\tr6, r7\n \tlsrs\tr4, r3, #1\n \tmovs\tr0, r0\n \tldrh\tr6, [r2, r6]\n \tmovs\tr6, r7\n-\tldrh\tr6, [r1, r1]\n+\tldrh\tr2, [r3, r1]\n \tmovs\tr2, r6\n-\tldrh\tr0, [r2, r0]\n+\tldrh\tr4, [r3, r0]\n \tmovs\tr2, r6\n-\tldr\tr0, [r7, r6]\n+\tldr\tr4, [r0, r7]\n \tmovs\tr2, r6\n HashStatistics::assignReadBaseStatistics_MultiThread(ReadPool&, unsigned int, bool, unsigned int, bool):\n ./src/mira/hashstats.C:2236\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n \tldr.w\tr3, [pc, #1608]\t@ ccb28 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x28990>\n \tvpush\t{d8-d12}\n@@ -384021,34 +384021,34 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #7\n \tmovs\tr0, r0\n \tlsls\tr0, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #23\n \tmovs\tr0, r0\n-\tsubs\tr4, #244\t@ 0xf4\n+\tsubs\tr4, #252\t@ 0xfc\n \tmovs\tr3, r6\n-\tvshr.s16\td16, d19, #6\n-\tmovs\tr7, #90\t@ 0x5a\n+\tvshr.s32\td16, d19, #30\n+\tmovs\tr7, #102\t@ 0x66\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tsubs\tr7, #144\t@ 0x90\n+\tsubs\tr7, #156\t@ 0x9c\n \tmovs\tr2, r6\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tsubs\tr7, #30\n+\tsubs\tr7, #42\t@ 0x2a\n \tmovs\tr2, r6\n-\tsubs\tr4, #232\t@ 0xe8\n+\tsubs\tr4, #244\t@ 0xf4\n \tmovs\tr2, r6\n-\tsubs\tr5, #38\t@ 0x26\n+\tsubs\tr5, #50\t@ 0x32\n \tmovs\tr2, r6\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s23\n \tmovs\tr2, #2\n \tmov\tr0, sl\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n /usr/include/c++/10/ostream:185\n@@ -384735,132 +384735,132 @@\n \tldr\tr7, [sp, #12]\n \tldr\tr0, [r7, #4]\n \tcmp\tr0, #0\n \tbeq.n\tccfc6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x28e2e>\n \tbl\t997cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65a94>\n \tb.n\tccfc6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x28e2e>\n \tnop\n-\tmovs\tr3, #230\t@ 0xe6\n+\tmovs\tr3, #242\t@ 0xf2\n \tmovs\tr2, r6\n \tlsls\tr4, r4, #12\n \tmovs\tr6, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr0, #70\t@ 0x46\n+\tsubs\tr0, #78\t@ 0x4e\n \tmovs\tr3, r6\n-\t\t\t@ instruction: 0xeb320033\n-\tmovs\tr2, #184\t@ 0xb8\n+\t\t\t@ instruction: 0xeb3a0033\n+\tmovs\tr2, #196\t@ 0xc4\n \tmovs\tr2, r6\n-\tmovs\tr2, #70\t@ 0x46\n+\tmovs\tr2, #82\t@ 0x52\n \tmovs\tr2, r6\n-\tstmia\tr6!, {r3, r6, r7}\n+\tstmia\tr6!, {r2, r4, r6, r7}\n \tmovs\tr1, r6\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tstr\tr6, [r4, r2]\n+\tstr\tr2, [r6, r2]\n \tmovs\tr2, r6\n \tlsls\tr0, r0, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r6}\n+\tstmia\tr6!, {r2, r3, r6}\n \tmovs\tr1, r6\n-\tsubs\tr5, #102\t@ 0x66\n+\tsubs\tr5, #114\t@ 0x72\n \tmovs\tr2, r6\n-\tsubs\tr5, #188\t@ 0xbc\n+\tsubs\tr5, #200\t@ 0xc8\n \tmovs\tr2, r6\n-\tsubs\tr4, #170\t@ 0xaa\n+\tsubs\tr4, #182\t@ 0xb6\n \tmovs\tr2, r6\n-\tsubs\tr2, #56\t@ 0x38\n+\tsubs\tr2, #68\t@ 0x44\n \tmovs\tr2, r6\n-\tstmia\tr5!, {r2, r4, r5, r6, r7}\n+\tstmia\tr6!, {}\n \tmovs\tr1, r6\n-\tsubs\tr6, #126\t@ 0x7e\n+\tsubs\tr6, #138\t@ 0x8a\n \tmovs\tr2, r6\n-\tsubs\tr5, #224\t@ 0xe0\n+\tsubs\tr5, #236\t@ 0xec\n \tmovs\tr2, r6\n-\tsubs\tr6, #170\t@ 0xaa\n+\tsubs\tr6, #182\t@ 0xb6\n \tmovs\tr2, r6\n-\tstr\tr6, [r0, r1]\n+\tstr\tr2, [r2, r1]\n \tmovs\tr2, r6\n-\tsubs\tr3, #110\t@ 0x6e\n+\tsubs\tr3, #122\t@ 0x7a\n \tmovs\tr2, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tsubs\tr4, #52\t@ 0x34\n+\tsubs\tr4, #64\t@ 0x40\n \tmovs\tr2, r6\n-\tsubs\tr4, #110\t@ 0x6e\n+\tsubs\tr4, #122\t@ 0x7a\n \tmovs\tr2, r6\n-\tsubs\tr4, #160\t@ 0xa0\n+\tsubs\tr4, #172\t@ 0xac\n \tmovs\tr2, r6\n-\tadd\tr0, sp, #984\t@ 0x3d8\n+\tadd\tr1, sp, #8\n \tmovs\tr1, r6\n-\tadd\tr1, sp, #48\t@ 0x30\n+\tadd\tr1, sp, #96\t@ 0x60\n \tmovs\tr1, r6\n-\tadd\tr1, sp, #216\t@ 0xd8\n+\tadd\tr1, sp, #264\t@ 0x108\n \tmovs\tr1, r6\n-\tsubs\tr0, #56\t@ 0x38\n+\tsubs\tr0, #68\t@ 0x44\n \tmovs\tr2, r6\n-\tsubs\tr0, #106\t@ 0x6a\n+\tsubs\tr0, #118\t@ 0x76\n \tmovs\tr2, r6\n-\tsubs\tr0, #216\t@ 0xd8\n+\tsubs\tr0, #228\t@ 0xe4\n \tmovs\tr2, r6\n-\tsubs\tr0, #38\t@ 0x26\n+\tsubs\tr0, #50\t@ 0x32\n \tmovs\tr2, r6\n-\tsubs\tr0, #88\t@ 0x58\n+\tsubs\tr0, #100\t@ 0x64\n \tmovs\tr2, r6\n-\tsubs\tr0, #150\t@ 0x96\n+\tsubs\tr0, #162\t@ 0xa2\n \tmovs\tr2, r6\n-\tsubs\tr3, #232\t@ 0xe8\n+\tsubs\tr3, #244\t@ 0xf4\n \tmovs\tr2, r6\n-\tsubs\tr4, #34\t@ 0x22\n+\tsubs\tr4, #46\t@ 0x2e\n \tmovs\tr2, r6\n-\tsubs\tr4, #112\t@ 0x70\n+\tsubs\tr4, #124\t@ 0x7c\n \tmovs\tr2, r6\n-\tsubs\tr5, #6\n+\tsubs\tr5, #18\n \tmovs\tr2, r6\n-\tsubs\tr5, #52\t@ 0x34\n+\tsubs\tr5, #64\t@ 0x40\n \tmovs\tr2, r6\n-\tsubs\tr5, #110\t@ 0x6e\n+\tsubs\tr5, #122\t@ 0x7a\n \tmovs\tr2, r6\n-\tadds\tr7, #176\t@ 0xb0\n+\tadds\tr7, #188\t@ 0xbc\n \tmovs\tr2, r6\n-\tadd\tr0, sp, #712\t@ 0x2c8\n+\tadd\tr0, sp, #760\t@ 0x2f8\n \tmovs\tr1, r6\n-\tadds\tr7, #200\t@ 0xc8\n+\tadds\tr7, #212\t@ 0xd4\n \tmovs\tr2, r6\n-\tsubs\tr5, #114\t@ 0x72\n+\tsubs\tr5, #126\t@ 0x7e\n \tmovs\tr2, r6\n-\tsubs\tr4, #160\t@ 0xa0\n+\tsubs\tr4, #172\t@ 0xac\n \tmovs\tr2, r6\n-\tmovs\tr7, #74\t@ 0x4a\n+\tmovs\tr7, #86\t@ 0x56\n \tmovs\tr2, r6\n-\tsubs\tr1, #120\t@ 0x78\n+\tsubs\tr1, #132\t@ 0x84\n \tmovs\tr2, r6\n-\tsubs\tr1, #174\t@ 0xae\n+\tsubs\tr1, #186\t@ 0xba\n \tmovs\tr2, r6\n-\tsubs\tr1, #228\t@ 0xe4\n+\tsubs\tr1, #240\t@ 0xf0\n \tmovs\tr2, r6\n-\tsubs\tr3, #142\t@ 0x8e\n+\tsubs\tr3, #154\t@ 0x9a\n \tmovs\tr2, r6\n-\tsubs\tr3, #200\t@ 0xc8\n+\tsubs\tr3, #212\t@ 0xd4\n \tmovs\tr2, r6\n-\tsubs\tr4, #6\n+\tsubs\tr4, #18\n \tmovs\tr2, r6\n-\tsubs\tr1, #84\t@ 0x54\n+\tsubs\tr1, #96\t@ 0x60\n \tmovs\tr2, r6\n-\tsubs\tr1, #138\t@ 0x8a\n+\tsubs\tr1, #150\t@ 0x96\n \tmovs\tr2, r6\n-\tsubs\tr1, #232\t@ 0xe8\n+\tsubs\tr1, #244\t@ 0xf4\n \tmovs\tr2, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n void std::__adjust_heap<__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, int, HashStatistics >::hashstat_t, __gnu_cxx::__ops::_Iter_comp_iter >::hashstat_t const&, HashStatistics >::hashstat_t const&)> >(__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, int, int, HashStatistics >::hashstat_t, __gnu_cxx::__ops::_Iter_comp_iter >::hashstat_t const&, HashStatistics >::hashstat_t const&)>):\n /usr/include/c++/10/bits/stl_heap.h:223\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr3, r2\n@@ -385906,15 +385906,15 @@\n ./src/mira/hashstats.C:244\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \t\t\t@ instruction: 0xf53a003d\n \tlsrs\tr0, r3, #5\n \tmovs\tr0, r0\n-\tsubs\tr6, #254\t@ 0xfe\n+\tsubs\tr7, #10\n \tmovs\tr2, r6\n HashStatistics >::priv_makeHashStatArrayShortcuts():\n ./src/mira/hashstats.C:2169\n \tldr\tr2, [pc, #884]\t@ (cddc4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x29c2c>)\n \tldr\tr3, [pc, #888]\t@ (cddc8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x29c30>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -386363,15 +386363,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr4, #36\t@ 0x24\n+\tsubs\tr4, #48\t@ 0x30\n \tmovs\tr2, r6\n \tlsrs\tr0, r3, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -386866,21 +386866,21 @@\n \tlsrs\tr4, r7, #27\n \tmovs\tr0, r0\n \tvqadd.s32\td16, d0, d29\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr4, r6, #23\n+\tlsrs\tr0, r0, #24\n \tmovs\tr2, r6\n-\tlsrs\tr0, r4, #23\n+\tlsrs\tr4, r5, #23\n \tmovs\tr2, r6\n-\tlsrs\tr6, r2, #23\n+\tlsrs\tr2, r4, #23\n \tmovs\tr2, r6\n-\tlsrs\tr2, r2, #23\n+\tlsrs\tr6, r3, #23\n \tmovs\tr2, r6\n ./src/mira/hashstats.C:2931 (discriminator 1)\n \tadd\tr5, sp, #112\t@ 0x70\n \tmov\tr0, r5\n \tbl\t968b4 , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x62b7c>\n /usr/include/c++/10/ostream:611 (discriminator 1)\n \tldr\tr1, [pc, #192]\t@ (ce28c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2a0f4>)\n@@ -386977,25 +386977,25 @@\n \tldr\tr1, [sp, #96]\t@ 0x60\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\tce26e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2a0d6>\n \tnop\n-\tlsrs\tr6, r7, #19\n+\tlsrs\tr2, r1, #20\n \tmovs\tr2, r6\n-\tlsrs\tr6, r1, #20\n+\tlsrs\tr2, r3, #20\n \tmovs\tr2, r6\n \tlsls\tr0, r5, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr4, r7, #19\n+\tlsrs\tr0, r1, #20\n \tmovs\tr2, r6\n HashStatistics >::findVHash(HashStatistics >::hashstat_t const&):\n ./src/mira/hashstats.C:2980\n \tldr\tr2, [pc, #812]\t@ (ce5d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2a43c>)\n \tldr\tr3, [pc, #816]\t@ (ce5d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2a440>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -387424,15 +387424,15 @@\n \tldc\t0, cr0, [r8], #244\t@ 0xf4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstc\t0, cr0, [r8], #244\t@ 0xf4\n \tlsrs\tr4, r7, #27\n \tmovs\tr0, r0\n \torn\tr0, r8, sp, rrx\n-\tadds\tr4, #10\n+\tadds\tr4, #22\n \tmovs\tr2, r6\n \tlsrs\tr0, r0, #14\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -387909,17 +387909,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr0, #140\t@ 0x8c\n+\tadds\tr0, #152\t@ 0x98\n \tmovs\tr2, r6\n-\tadds\tr0, #142\t@ 0x8e\n+\tadds\tr0, #154\t@ 0x9a\n \tmovs\tr2, r6\n \tlsrs\tr4, r1, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -388695,17 +388695,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr2, #190\t@ 0xbe\n+\tcmp\tr2, #202\t@ 0xca\n \tmovs\tr2, r6\n-\tcmp\tr2, #192\t@ 0xc0\n+\tcmp\tr2, #204\t@ 0xcc\n \tmovs\tr2, r6\n \tlsrs\tr4, r3, #11\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -388729,15 +388729,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tudf\t#90\t@ 0x5a\n \tmovs\tr5, r7\n \tlsrs\tr4, r0, #13\n \tmovs\tr0, r0\n-\tcmp\tr0, #166\t@ 0xa6\n+\tcmp\tr0, #178\t@ 0xb2\n \tmovs\tr2, r6\n HashStatistics >::priv_sortByCountUp(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:252\n \tldr\tr3, [pc, #28]\t@ (cf14c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2afb4>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:254\n \tldr\tr4, [pc, #28]\t@ (cf150 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2afb8>)\n@@ -388755,15 +388755,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tudf\t#46\t@ 0x2e\n \tmovs\tr5, r7\n \tlsrs\tr0, r7, #6\n \tmovs\tr0, r0\n-\tcmp\tr0, #146\t@ 0x92\n+\tcmp\tr0, #158\t@ 0x9e\n \tmovs\tr2, r6\n HashStatistics >::priv_calcAvgHashFreq(bool):\n ./src/mira/hashstats.C:1494\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n ./src/mira/../../src/mira/hashstats.H:461\n \tadd.w\tr7, r0, #152\t@ 0x98\n@@ -389307,37 +389307,37 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tble.n\tcf550 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b3b8>\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr7, #198\t@ 0xc6\n+\tmovs\tr7, #210\t@ 0xd2\n \tmovs\tr2, r6\n-\tmovs\tr7, #132\t@ 0x84\n+\tmovs\tr7, #144\t@ 0x90\n \tmovs\tr2, r6\n-\tldr\tr1, [pc, #792]\t@ (cf8c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b728>)\n+\tldr\tr1, [pc, #824]\t@ (cf8e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b748>)\n \tmovs\tr5, r6\n-\tmovs\tr7, #36\t@ 0x24\n+\tmovs\tr7, #48\t@ 0x30\n \tmovs\tr2, r6\n-\tmovs\tr7, #6\n+\tmovs\tr7, #18\n \tmovs\tr2, r6\n-\tmovs\tr6, #212\t@ 0xd4\n+\tmovs\tr6, #224\t@ 0xe0\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr6, #14\n+\tmovs\tr6, #26\n \tmovs\tr2, r6\n-\tmovs\tr5, #198\t@ 0xc6\n+\tmovs\tr5, #210\t@ 0xd2\n \tmovs\tr2, r6\n-\tblxns\tip\n+\tblxns\tsp\n \tmovs\tr5, r6\n-\tmovs\tr5, #76\t@ 0x4c\n+\tmovs\tr5, #88\t@ 0x58\n \tmovs\tr2, r6\n-\tmovs\tr5, #42\t@ 0x2a\n+\tmovs\tr5, #54\t@ 0x36\n \tmovs\tr2, r6\n HashStatistics >::priv_sortByCountDown(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:258\n \tldr\tr3, [pc, #28]\t@ (cf5ec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b454>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:260\n \tldr\tr4, [pc, #28]\t@ (cf5f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b458>)\n@@ -389355,15 +389355,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tbls.n\tcf50c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b374>\n \tmovs\tr5, r7\n \tlsls\tr4, r2, #22\n \tmovs\tr0, r0\n-\tmovs\tr4, #110\t@ 0x6e\n+\tmovs\tr4, #122\t@ 0x7a\n \tmovs\tr2, r6\n HashStatistics >::priv_sortLexByCount(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:264\n \tldr\tr3, [pc, #28]\t@ (cf618 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b480>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:266\n \tldr\tr4, [pc, #28]\t@ (cf61c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b484>)\n@@ -389381,15 +389381,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tbls.n\tcf6e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b548>\n \tmovs\tr5, r7\n \tlsrs\tr4, r6, #17\n \tmovs\tr0, r0\n-\tmovs\tr4, #82\t@ 0x52\n+\tmovs\tr4, #94\t@ 0x5e\n \tmovs\tr2, r6\n HashStatistics >::priv_compressHashStatBufferInPlace(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned int):\n ./src/mira/hashstats.C:940\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr\tr4, [pc, #808]\t@ (cf954 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b7bc>)\n \tsub\tsp, #92\t@ 0x5c\n@@ -390022,15 +390022,15 @@\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbpl.n\tcfa70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b8d8>\n \tmovs\tr5, r7\n \tbpl.n\tcf9dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2b844>\n \tmovs\tr5, r7\n-\tmovs\tr0, #62\t@ 0x3e\n+\tmovs\tr0, #74\t@ 0x4a\n \tmovs\tr2, r6\n \tlsrs\tr4, r0, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -391289,41 +391289,41 @@\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\td04f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c35c>\n \tb.n\td052c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c394>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\td04c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c328>\n \tb.n\td04ca , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c332>\n \tnop\n-\tadds\tr4, r7, r5\n+\tadds\tr0, r1, r6\n \tmovs\tr2, r6\n \tlsrs\tr4, r7, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr2, r7, r3\n+\tadds\tr6, r0, r4\n \tmovs\tr2, r6\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmcrr\t0, 3, r0, ip, cr1\n-\tldc\t0, cr0, [sl], #-196\t@ 0xffffff3c\n-\tldc\t0, cr0, [r2], #-196\t@ 0xffffff3c\n-\tldc\t0, cr0, [r0], #-196\t@ 0xffffff3c\n-\trsbs\tr0, lr, r1, rrx\n+\tmrrc\t0, 3, r0, r8, cr1\n+\tmcrr\t0, 3, r0, r6, cr1\n+\tldc\t0, cr0, [lr], #-196\t@ 0xffffff3c\n+\tldc\t0, cr0, [ip], #-196\t@ 0xffffff3c\n+\t\t\t@ instruction: 0xebea0031\n+\trsbs\tr0, sl, r1, rrx\n+\trsbs\tr0, r0, r1, rrx\n \trsb\tr0, lr, r1, rrx\n-\trsb\tr0, r4, r1, rrx\n-\trsb\tr0, r2, r1, rrx\n-\trsb\tr0, r0, r1, rrx\n-\t\t\t@ instruction: 0xeb240031\n-\t\t\t@ instruction: 0xeb360031\n-\t\t\t@ instruction: 0xeaa60031\n-\t\t\t@ instruction: 0xeab80031\n+\trsb\tr0, ip, r1, rrx\n+\t\t\t@ instruction: 0xeb300031\n+\tadc.w\tr0, r2, r1, rrx\n+\t\t\t@ instruction: 0xeab20031\n+\t\t\t@ instruction: 0xeac40031\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_hashes2disk(ReadPool&, bool, bool, bool, unsigned int):\n ./src/mira/hashstats.C:708\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr8, [pc, #796]\t@ d08b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c71c>\n@@ -391709,33 +391709,33 @@\n \tmovs\tr0, r0\n \tldmia\tr1!, {r6, r7}\n \tmovs\tr5, r7\n \tldmia\tr1, {r1, r2, r4, r5, r7}\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmrc2\t0, 7, r0, cr10, cr2, {1}\n-\tcbz\tr0, d0902 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c76a>\n+\tvqadd.u8\td0, d2, d18\n+\tcbz\tr0, d0904 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c76c>\n \tmovs\tr3, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmdb\tr0, {r0, r4, r5}\n-\tldmia.w\tr2!, {r0, r4, r5}\n+\tldmdb\tip, {r0, r4, r5}\n+\tldmia.w\tlr!, {r0, r4, r5}\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstc2l\t0, cr0, [sl], #200\t@ 0xc8\n-\tadd\tr7, sp, #848\t@ 0x350\n+\tldc2l\t0, cr0, [r2], #200\t@ 0xc8\n+\tadd\tr7, sp, #880\t@ 0x370\n \tmovs\tr3, r6\n-\tb.n\td0798 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c600>\n+\tb.n\td07b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c618>\n \tmovs\tr1, r6\n-\tb.n\td06fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c564>\n+\tb.n\td0714 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2c57c>\n \tmovs\tr1, r6\n \tstmia\tr6!, {r3, r5, r6, r7}\n \tmovs\tr5, r7\n-\tasrs\tr0, r1, #9\n+\tasrs\tr4, r2, #9\n \tmovs\tr2, r6\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tfp, [pc, #932]\t@ d0c98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2cb00>\n \tadd.w\tr9, sp, #144\t@ 0x90\n \tmov\tr0, r9\n \tmov.w\tsl, #0\n \tblx\tbcc4 \n@@ -392203,31 +392203,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r4, #26]\n+\tldrh\tr0, [r6, #26]\n \tmovs\tr1, r6\n-\tldrh\tr0, [r4, #26]\n+\tldrh\tr4, [r5, #26]\n \tmovs\tr1, r6\n-\tadd\tr1, pc, #632\t@ (adr r1, d0f30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2cd98>)\n+\tadd\tr1, pc, #664\t@ (adr r1, d0f50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2cdb8>)\n \tmovs\tr3, r6\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr4, [r4, #18]\n+\tldrh\tr0, [r6, #18]\n \tmovs\tr1, r6\n-\tldrh\tr0, [r3, #18]\n+\tldrh\tr4, [r4, #18]\n \tmovs\tr1, r6\n-\tsxth\tr0, r5\n+\tsxth\tr0, r6\n \tmovs\tr3, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_createHashStatisticsFile(std::__cxx11::basic_string, std::allocator > const&, std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::vector >&, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1090\n@@ -392828,33 +392828,33 @@\n \tmovs\tr0, r0\n \tstmia\tr2!, {r4, r5, r6}\n \tmovs\tr5, r7\n \tstmia\tr2!, {r1, r2, r3, r4, r6}\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr4, r2, #20\n+\tlsrs\tr0, r4, #20\n \tmovs\tr2, r6\n-\tlsls\tr4, r2, #5\n+\tlsls\tr0, r4, #5\n \tmovs\tr2, r6\n-\t\t\t@ instruction: 0xf6640032\n-\tadd\tr1, sp, #328\t@ 0x148\n+\t\t\t@ instruction: 0xf66c0032\n+\tadd\tr1, sp, #360\t@ 0x168\n \tmovs\tr3, r6\n-\tb.n\td1378 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d1e0>\n+\tb.n\td1390 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d1f8>\n \tmovs\tr1, r6\n-\tlsrs\tr4, r2, #18\n+\tlsrs\tr0, r4, #18\n \tmovs\tr2, r6\n-\tvshr.u16\td16, d17, #14\n-\tlsrs\tr2, r1, #17\n+\tvshr.u16\td16, d17, #2\n+\tlsrs\tr6, r2, #17\n \tmovs\tr2, r6\n-\tlsrs\tr0, r7, #10\n+\tlsrs\tr4, r0, #11\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tudf\t#2\n+\tudf\t#14\n \tmovs\tr1, r6\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, sl\n \tblx\tb51c ::_M_widen_init() const@plt>\n /usr/include/c++/10/bits/locale_facets.h:877\n \tldr\tr0, [pc, #832]\t@ (d1530 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d398>)\n \tldr\tr2, [sp, #28]\n@@ -393265,34 +393265,34 @@\n \tb.n\td1440 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d2a8>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf2820032\n-\tadd\tr5, pc, #448\t@ (adr r5, d16fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d564>)\n+\t\t\t@ instruction: 0xf28a0032\n+\tadd\tr5, pc, #480\t@ (adr r5, d171c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d584>)\n \tmovs\tr3, r6\n-\tbgt.n\td152c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d394>\n+\tble.n\td1544 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d3ac>\n \tmovs\tr1, r6\n-\tbgt.n\td1494 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d2fc>\n+\tbgt.n\td14ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d314>\n \tmovs\tr1, r6\n-\tlsrs\tr4, r7, #4\n+\tlsrs\tr0, r1, #5\n \tmovs\tr2, r6\n-\tstrb\tr4, [r5, #10]\n+\tstrb\tr4, [r6, #10]\n \tmovs\tr6, r6\n-\tlsrs\tr6, r2, #5\n+\tlsrs\tr2, r4, #5\n \tmovs\tr2, r6\n-\tlsrs\tr4, r4, #4\n+\tlsrs\tr0, r6, #4\n \tmovs\tr2, r6\n-\tlsrs\tr2, r5, #3\n+\tlsrs\tr6, r6, #3\n \tmovs\tr2, r6\n-\tlsrs\tr4, r5, #2\n+\tlsrs\tr0, r7, #2\n \tmovs\tr2, r6\n-\tlsrs\tr6, r5, #1\n+\tlsrs\tr2, r7, #1\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \thlt\t0x003e\n \tmovs\tr5, r7\n /usr/include/c++/10/bits/locale_facets.h:876\n \tldr.w\tr8, [pc, #1132]\t@ d19d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d840>\n@@ -393888,38 +393888,38 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\td1952 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d7ba>\n \tb.n\td1964 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d7cc>\n \tb.n\td1952 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d7ba>\n \tb.n\td1964 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2d7cc>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsls\tr4, r4, #19\n+\tlsls\tr0, r6, #19\n \tmovs\tr2, r6\n \tlsls\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr??.w\tr0, [sl, r1, lsl #3]\n-\tlsls\tr4, r7, #18\n+\tstrb.w\tr0, [r6, #49]\t@ 0x31\n+\tlsls\tr0, r1, #19\n \tmovs\tr2, r6\n-\t\t\t@ instruction: 0xfa100031\n-\tlsls\tr0, r2, #18\n+\t\t\t@ instruction: 0xfa1c0031\n+\tlsls\tr4, r3, #18\n \tmovs\tr2, r6\n-\tlsls\tr6, r7, #17\n+\tlsls\tr2, r1, #18\n \tmovs\tr2, r6\n-\tlsls\tr0, r7, #17\n+\tlsls\tr4, r0, #18\n \tmovs\tr2, r6\n-\t\t\t@ instruction: 0xf6260031\n-\t\t\t@ instruction: 0xf6ba0031\n-\tlsls\tr2, r5, #10\n+\t\t\t@ instruction: 0xf6320031\n+\tmovt\tr0, #26673\t@ 0x6831\n+\tlsls\tr6, r6, #10\n \tmovs\tr2, r6\n-\t\t\t@ instruction: 0xf63c0031\n-\tlsls\tr4, r0, #13\n+\tmovw\tr0, #34865\t@ 0x8831\n+\tlsls\tr0, r2, #13\n \tmovs\tr2, r6\n HashStatistics >::prepareStreamFinalise(unsigned int, unsigned int):\n ./src/mira/hashstats.C:522\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr6, [pc, #956]\t@ (d1ddc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dc44>)\n \tvpush\t{d8-d9}\n@@ -394377,38 +394377,38 @@\n \teors\tr1, r3\n \tmovs\tr1, r0\n \tmovs\tr0, r0\n \tpush\t{r3, r4, r5, lr}\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr6, r5, #10\n+\tlsls\tr2, r7, #10\n \tmovs\tr2, r6\n-\torrs.w\tr0, lr, r2, rrx\n-\tldr\tr5, [sp, #288]\t@ 0x120\n+\torn\tr0, r6, r2, rrx\n+\tldr\tr5, [sp, #320]\t@ 0x140\n \tmovs\tr3, r6\n-\tbmi.n\td1d8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dbf4>\n+\tbmi.n\td1da4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dc0c>\n \tmovs\tr1, r6\n-\tbmi.n\td1e44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dcac>\n+\tbmi.n\td1e5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dcc4>\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xe8d40032\n-\tldr\tr3, [sp, #776]\t@ 0x308\n+\t\t\t@ instruction: 0xe8dc0032\n+\tldr\tr3, [sp, #808]\t@ 0x328\n \tmovs\tr3, r6\n-\tbcc.n\td1e94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dcfc>\n+\tbcc.n\td1eac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dd14>\n \tmovs\tr1, r6\n-\tbcs.n\td1df8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dc60>\n+\tbcc.n\td1e10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2dc78>\n \tmovs\tr1, r6\n-\tldrb\tr2, [r4, #4]\n+\tldrb\tr6, [r5, #4]\n \tmovs\tr1, r6\n-\tlsls\tr6, r5, #1\n+\tlsls\tr2, r7, #1\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tvmvn.i32\td0, #129\t@ 0x00000081\n-\tldr\tr6, [r2, #4]\n+\tvshr.u8\td0, d17, #4\n+\tldr\tr6, [r3, #4]\n \tmovs\tr2, r6\n HashStatistics >::computeHashStatistics(ReadPool&, int, bool, bool, bool, unsigned int, unsigned int, unsigned int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:350\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r3\n \tldr\tr5, [pc, #520]\t@ (d202c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2de94>)\n ./src/mira/hashstats.C:354\n@@ -394680,30 +394680,30 @@\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsub\tsp, #488\t@ 0x1e8\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmcr2\t0, 6, r0, cr14, cr1, {1}\n+\tmrc2\t0, 6, r0, cr10, cr1, {1}\n \tsub\tsp, #272\t@ 0x110\n \tmovs\tr5, r7\n \tsub\tsp, #136\t@ 0x88\n \tmovs\tr5, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tvst1.8\t\t\t@ instruction: 0xf98c0031\n+\tldrsb.w\tr0, [r8, #49]\t@ 0x31\n \tlsrs\tr0, r4, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n@@ -395319,18 +395319,18 @@\n \tmovs\tr5, r7\n \tadd\tr6, sp, #800\t@ 0x320\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstc2\t0, cr0, [r6], #-196\t@ 0xffffff3c\n-\tstc2\t0, cr0, [r4], {49}\t@ 0x31\n-\t\t\t@ instruction: 0xfbd80031\n-\tldr\tr2, [r6, #0]\n+\tldc2\t0, cr0, [r2], #-196\t@ 0xffffff3c\n+\tldc2\t0, cr0, [r0], {49}\t@ 0x31\n+\t\t\t@ instruction: 0xfbe40031\n+\tldr\tr2, [r7, #0]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n ./src/mira/hashstats.C:458\n \tmov\tr0, r5\n@@ -395792,29 +395792,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tip, r6\n+\tcmp\tr8, r8\n \tmovs\tr1, r6\n-\tcmp\tsl, r6\n+\tcmp\tlr, r7\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr2, [r5, #88]\t@ 0x58\n+\tldr\tr6, [r6, #88]\t@ 0x58\n \tmovs\tr1, r6\n-\tldr\tr6, [r3, #88]\t@ 0x58\n+\tldr\tr2, [r5, #88]\t@ 0x58\n \tmovs\tr1, r6\n-\tstr\tr5, [sp, #432]\t@ 0x1b0\n+\tstr\tr5, [sp, #464]\t@ 0x1d0\n \tmovs\tr3, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr5, [sp, #88]\t@ 0x58\n@@ -396407,29 +396407,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsbcs\tr0, r1\n+\tsbcs\tr4, r2\n \tmovs\tr1, r6\n-\tsbcs\tr6, r0\n+\tsbcs\tr2, r2\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr0, [r0, #24]\n+\tldr\tr4, [r1, #24]\n \tmovs\tr1, r6\n-\tldr\tr4, [r6, #20]\n+\tldr\tr0, [r0, #24]\n \tmovs\tr1, r6\n-\tstr\tr1, [sp, #264]\t@ 0x108\n+\tstr\tr1, [sp, #296]\t@ 0x128\n \tmovs\tr3, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, r6\n@@ -396894,28 +396894,28 @@\n \tb.n\td2ee6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2ed4e>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\td2f3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2eda4>\n \tb.n\td2f46 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2edae>\n \tb.n\td2f4c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2edb4>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tvshr.s32\td16, d17, #6\n-\tands.w\tr0, r8, #49\t@ 0x31\n+\tand.w\tr0, r6, #49\t@ 0x31\n+\tbic.w\tr0, r4, #49\t@ 0x31\n \tlsrs\tr4, r6, #22\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr4, [r0, r3]\n+\tldrb\tr0, [r2, r3]\n \tmovs\tr1, r6\n-\tldrb\tr4, [r7, r2]\n+\tldrb\tr0, [r1, r3]\n \tmovs\tr1, r6\n-\tvqadd.s16\td0, d4, d17\n-\tsubs\tr5, #82\t@ 0x52\n+\tvqadd.s32\td0, d0, d17\n+\tsubs\tr5, #94\t@ 0x5e\n \tmovs\tr1, r6\n HashStatistics >::priv_sortMaskUp(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:270\n \tpush\t{r4, lr}\n \tldr.w\tip, [pc, #40]\t@ d30b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2ef20>\n \tsub\tsp, #8\n \tadd\tip, pc\n@@ -396936,15 +396936,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldr\tr6, [sp, #816]\t@ 0x330\n \tmovs\tr5, r7\n \tlsrs\tr4, r1, #23\n \tmovs\tr0, r0\n-\tstcl\t0, cr0, [r4, #-196]!\t@ 0xffffff3c\n+\tldcl\t0, cr0, [r0, #-196]!\t@ 0xffffff3c\n HashStatistics >::calcKMerForks(unsigned int, bool):\n ./src/mira/hashstats.C:2001\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr4, [pc, #1024]\t@ d34cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2f334>\n /usr/include/c++/10/bits/stl_iterator.h:979\n \tldr.w\tr0, [r0, #152]\t@ 0x98\n@@ -397374,17 +397374,17 @@\n \tadd\tsp, #28\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tldr\tr6, [sp, #544]\t@ 0x220\n \tmovs\tr5, r7\n \tlsls\tr0, r3, #25\n \tmovs\tr0, r0\n \tstc\t0, cr0, [r8], #-244\t@ 0xffffff0c\n-\t\t\t@ instruction: 0xeae60031\n-\teor.w\tr0, r2, r1, rrx\n-\tldrd\tr0, r0, [sl, #196]!\t@ 0xc4\n+\t\t\t@ instruction: 0xeaf20031\n+\teor.w\tr0, lr, r1, rrx\n+\tand.w\tr0, r6, r1, rrx\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::assignReadBaseStatistics_MultiThread(ReadPool&, unsigned int, bool, unsigned int, bool):\n ./src/mira/hashstats.C:2236\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n \tldr.w\tr3, [pc, #1608]\t@ d3b38 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2f9a0>\n@@ -398222,35 +398222,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #26\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #22\n \tmovs\tr0, r0\n-\tldmia\tr4!, {r2, r5, r6, r7}\n+\tldmia\tr4!, {r2, r3, r5, r6, r7}\n \tmovs\tr2, r6\n-\tldrb\tr2, [r1, #31]\n+\tldrb\tr2, [r2, #31]\n \tmovs\tr3, r6\n-\t\t\t@ instruction: 0xb74a\n+\t\t\t@ instruction: 0xb756\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tldmia\tr7, {r7}\n+\tldmia\tr7, {r2, r3, r7}\n \tmovs\tr1, r6\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tldmia\tr7!, {r1, r2, r3}\n+\tldmia\tr7!, {r1, r3, r4}\n \tmovs\tr1, r6\n-\tldmia\tr4, {r3, r4, r6, r7}\n+\tldmia\tr4!, {r2, r5, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr5!, {r1, r2, r4}\n+\tldmia\tr5, {r1, r5}\n \tmovs\tr1, r6\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s23\n \tmovs\tr2, #2\n \tmov\tr0, sl\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n /usr/include/c++/10/ostream:185\n@@ -398937,133 +398937,133 @@\n \tldr\tr7, [sp, #12]\n \tldr\tr0, [r7, #4]\n \tcmp\tr0, #0\n \tbeq.n\td3fd6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2fe3e>\n \tbl\t997cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65a94>\n \tb.n\td3fd6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2fe3e>\n \tnop\n-\tcbz\tr6, d4150 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2ffb8>\n+\tcbz\tr2, d4154 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x2ffbc>\n \tmovs\tr1, r6\n \tstr\tr3, [sp, #80]\t@ 0x50\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r1, r2, r4, r5}\n+\tldmia\tr0!, {r1, r2, r3, r4, r5}\n \tmovs\tr2, r6\n-\tldrb\tr2, [r4, #12]\n+\tldrb\tr2, [r5, #12]\n \tmovs\tr3, r6\n-\tuxth\tr0, r5\n+\tuxth\tr4, r6\n \tmovs\tr1, r6\n-\tsxth\tr6, r6\n+\tsxtb\tr2, r0\n \tmovs\tr1, r6\n-\tldrsb\tr0, [r7, r2]\n+\tldrsb\tr4, [r0, r3]\n \tmovs\tr1, r6\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tb.n\td4234 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3009c>\n+\tb.n\td424c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x300b4>\n \tmovs\tr1, r6\n \tlsrs\tr4, r2, #22\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsb\tr0, [r6, r0]\n+\tldrsb\tr4, [r7, r0]\n \tmovs\tr1, r6\n-\tldmia\tr5!, {r1, r2, r4, r6}\n+\tldmia\tr5, {r1, r5, r6}\n \tmovs\tr1, r6\n-\tldmia\tr5, {r2, r3, r5, r7}\n+\tldmia\tr5, {r3, r4, r5, r7}\n \tmovs\tr1, r6\n-\tldmia\tr4, {r1, r3, r4, r7}\n+\tldmia\tr4!, {r1, r2, r5, r7}\n \tmovs\tr1, r6\n-\tldmia\tr2!, {r3, r5}\n+\tldmia\tr2, {r2, r4, r5}\n \tmovs\tr1, r6\n-\tstrb\tr4, [r4, r7]\n+\tstrb\tr0, [r6, r7]\n \tmovs\tr1, r6\n-\tldmia\tr6, {r1, r2, r3, r5, r6}\n+\tldmia\tr6, {r1, r3, r4, r5, r6}\n \tmovs\tr1, r6\n-\tldmia\tr5!, {r4, r6, r7}\n+\tldmia\tr5!, {r2, r3, r4, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr6!, {r1, r3, r4, r7}\n+\tldmia\tr6!, {r1, r2, r5, r7}\n \tmovs\tr1, r6\n-\tb.n\td41a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x30010>\n+\tb.n\td41c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x30028>\n \tmovs\tr1, r6\n-\tldmia\tr3, {r1, r2, r3, r4, r6}\n+\tldmia\tr3, {r1, r3, r5, r6}\n \tmovs\tr1, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tldmia\tr4!, {r2, r5}\n+\tldmia\tr4, {r4, r5}\n \tmovs\tr1, r6\n-\tldmia\tr4, {r1, r2, r3, r4, r6}\n+\tldmia\tr4!, {r1, r3, r5, r6}\n \tmovs\tr1, r6\n-\tldmia\tr4, {r4, r7}\n+\tldmia\tr4, {r2, r3, r4, r7}\n \tmovs\tr1, r6\n-\tsubs\tr0, #230\t@ 0xe6\n+\tsubs\tr0, #242\t@ 0xf2\n \tmovs\tr1, r6\n-\tsubs\tr0, #252\t@ 0xfc\n+\tsubs\tr1, #8\n \tmovs\tr1, r6\n-\tsubs\tr1, #38\t@ 0x26\n+\tsubs\tr1, #50\t@ 0x32\n \tmovs\tr1, r6\n-\tldmia\tr0!, {r3, r5}\n+\tldmia\tr0!, {r2, r4, r5}\n \tmovs\tr1, r6\n-\tldmia\tr0!, {r1, r3, r4, r6}\n+\tldmia\tr0!, {r1, r2, r5, r6}\n \tmovs\tr1, r6\n-\tldmia\tr0!, {r3, r6, r7}\n+\tldmia\tr0!, {r2, r4, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr0!, {r1, r2, r4}\n+\tldmia\tr0!, {r1, r5}\n \tmovs\tr1, r6\n-\tldmia\tr0!, {r3, r6}\n+\tldmia\tr0!, {r2, r4, r6}\n \tmovs\tr1, r6\n-\tldmia\tr0!, {r1, r2, r7}\n+\tldmia\tr0!, {r1, r4, r7}\n \tmovs\tr1, r6\n-\tldmia\tr3, {r3, r4, r6, r7}\n+\tldmia\tr3!, {r2, r5, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr4, {r1, r4}\n+\tldmia\tr4, {r1, r2, r3, r4}\n \tmovs\tr1, r6\n-\tldmia\tr4!, {r5, r6}\n+\tldmia\tr4!, {r2, r3, r5, r6}\n \tmovs\tr1, r6\n-\tldmia\tr4, {r1, r2, r4, r5, r6, r7}\n+\tldmia\tr5!, {r1}\n \tmovs\tr1, r6\n-\tldmia\tr5, {r2, r5}\n+\tldmia\tr5, {r4, r5}\n \tmovs\tr1, r6\n-\tldmia\tr5!, {r1, r2, r3, r4, r6}\n+\tldmia\tr5, {r1, r3, r5, r6}\n \tmovs\tr1, r6\n-\tstmia\tr7!, {r5, r7}\n+\tstmia\tr7!, {r2, r3, r5, r7}\n \tmovs\tr1, r6\n-\tsubs\tr0, #162\t@ 0xa2\n+\tsubs\tr0, #174\t@ 0xae\n \tmovs\tr1, r6\n-\tstmia\tr7!, {r3, r4, r5, r7}\n+\tstmia\tr7!, {r2, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr5, {r1, r5, r6}\n+\tldmia\tr5, {r1, r2, r3, r5, r6}\n \tmovs\tr1, r6\n-\tldmia\tr4, {r4, r7}\n+\tldmia\tr4, {r2, r3, r4, r7}\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xb73a\n+\t\t\t@ instruction: 0xb746\n \tmovs\tr1, r6\n-\tldmia\tr1!, {r3, r5, r6}\n+\tldmia\tr1!, {r2, r4, r5, r6}\n \tmovs\tr1, r6\n-\tldmia\tr1, {r1, r2, r3, r4, r7}\n+\tldmia\tr1, {r1, r3, r5, r7}\n \tmovs\tr1, r6\n-\tldmia\tr1!, {r2, r4, r6, r7}\n+\tldmia\tr1!, {r5, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr3, {r1, r2, r3, r4, r5, r6}\n+\tldmia\tr3, {r1, r3, r7}\n \tmovs\tr1, r6\n-\tldmia\tr3, {r3, r4, r5, r7}\n+\tldmia\tr3!, {r2, r6, r7}\n \tmovs\tr1, r6\n-\tldmia\tr3!, {r1, r2, r4, r5, r6, r7}\n+\tldmia\tr4!, {r1}\n \tmovs\tr1, r6\n-\tldmia\tr1!, {r2, r6}\n+\tldmia\tr1!, {r4, r6}\n \tmovs\tr1, r6\n-\tldmia\tr1, {r1, r3, r4, r5, r6}\n+\tldmia\tr1, {r1, r2, r7}\n \tmovs\tr1, r6\n-\tldmia\tr1!, {r3, r4, r6, r7}\n+\tldmia\tr1!, {r2, r5, r6, r7}\n \tmovs\tr1, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n void std::__adjust_heap<__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, int, HashStatistics >::hashstat_t, __gnu_cxx::__ops::_Iter_comp_iter >::hashstat_t const&, HashStatistics >::hashstat_t const&)> >(__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, int, int, HashStatistics >::hashstat_t, __gnu_cxx::__ops::_Iter_comp_iter >::hashstat_t const&, HashStatistics >::hashstat_t const&)>):\n /usr/include/c++/10/bits/stl_heap.h:223\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr3, r2\n@@ -400119,15 +400119,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tstrh\tr2, [r2, #40]\t@ 0x28\n \tmovs\tr5, r7\n \tlsrs\tr0, r4, #21\n \tmovs\tr0, r0\n-\tldmia\tr6, {r1, r2, r4, r6, r7}\n+\tldmia\tr6, {r1, r5, r6, r7}\n \tmovs\tr1, r6\n HashStatistics >::priv_makeHashStatArrayShortcuts():\n ./src/mira/hashstats.C:2169\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr1, [pc, #1032]\t@ d4e84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x30cec>\n \tsub\tsp, #292\t@ 0x124\n \tldr.w\tr2, [pc, #1032]\t@ d4e88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x30cf0>\n@@ -400668,15 +400668,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr3!, {r2, r5, r6}\n+\tldmia\tr3!, {r4, r5, r6}\n \tmovs\tr1, r6\n \tlsls\tr4, r0, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -401373,33 +401373,33 @@\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\td542e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x31296>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #976]\t@ 0x3d0\n+\tldr\tr4, [sp, #0]\n \tmovs\tr1, r6\n-\tldr\tr3, [sp, #904]\t@ 0x388\n+\tldr\tr3, [sp, #952]\t@ 0x3b8\n \tmovs\tr1, r6\n-\tldr\tr3, [sp, #864]\t@ 0x360\n+\tldr\tr3, [sp, #912]\t@ 0x390\n \tmovs\tr1, r6\n-\tldr\tr3, [sp, #848]\t@ 0x350\n+\tldr\tr3, [sp, #896]\t@ 0x380\n \tmovs\tr1, r6\n-\tldr\tr3, [sp, #232]\t@ 0xe8\n+\tldr\tr3, [sp, #280]\t@ 0x118\n \tmovs\tr1, r6\n-\tldr\tr3, [sp, #296]\t@ 0x128\n+\tldr\tr3, [sp, #344]\t@ 0x158\n \tmovs\tr1, r6\n \tlsls\tr0, r4, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #240]\t@ 0xf0\n+\tldr\tr3, [sp, #288]\t@ 0x120\n \tmovs\tr1, r6\n HashStatistics >::findVHash(HashStatistics >::hashstat_t const&):\n ./src/mira/hashstats.C:2980\n \tldr\tr2, [pc, #884]\t@ (d57f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x31658>)\n \tldr\tr3, [pc, #888]\t@ (d57f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3165c>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -401866,15 +401866,15 @@\n \tmovs\tr0, r0\n \tldrb\tr4, [r2, #11]\n \tmovs\tr5, r7\n \tlsrs\tr4, r0, #14\n \tmovs\tr0, r0\n \tldrb\tr6, [r3, #3]\n \tmovs\tr5, r7\n-\tstmia\tr1!, {r1, r2, r4, r5, r6, r7}\n+\tstmia\tr2!, {r1}\n \tmovs\tr1, r6\n \tlsls\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -402364,17 +402364,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbkpt\t0x0058\n+\tbkpt\t0x0064\n \tmovs\tr1, r6\n-\tbkpt\t0x005a\n+\tbkpt\t0x0066\n \tmovs\tr1, r6\n \tlsls\tr4, r2, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -402899,17 +402899,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\trev\tr0, r7\n+\trev16\tr4, r0\n \tmovs\tr1, r6\n-\trev\tr2, r7\n+\trev16\tr6, r0\n \tmovs\tr1, r6\n \tlsls\tr0, r4, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -402933,15 +402933,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldr\tr2, [r4, #100]\t@ 0x64\n \tmovs\tr5, r7\n \tlsrs\tr4, r3, #12\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb8ae\n+\t\t\t@ instruction: 0xb8ba\n \tmovs\tr1, r6\n HashStatistics >::priv_sortByCountUp(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:252\n \tldr\tr3, [pc, #28]\t@ (d6144 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x31fac>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:254\n \tldr\tr4, [pc, #28]\t@ (d6148 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x31fb0>)\n@@ -402959,15 +402959,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldr\tr6, [r6, #96]\t@ 0x60\n \tmovs\tr5, r7\n \tlsls\tr0, r1, #30\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb89a\n+\t\t\t@ instruction: 0xb8a6\n \tmovs\tr1, r6\n HashStatistics >::priv_calcAvgHashFreq(bool):\n ./src/mira/hashstats.C:1494\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n ./src/mira/../../src/mira/hashstats.H:461\n \tadd.w\tr7, r0, #152\t@ 0x98\n@@ -403504,37 +403504,37 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tldr\tr4, [r4, #92]\t@ 0x5c\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb7d6\n+\t\t\t@ instruction: 0xb7e2\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xb794\n+\t\t\t@ instruction: 0xb7a0\n \tmovs\tr1, r6\n-\tbls.n\td653c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x323a4>\n+\tbls.n\td654c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x323b4>\n \tmovs\tr4, r6\n-\t\t\t@ instruction: 0xb734\n+\t\t\t@ instruction: 0xb740\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xb716\n+\t\t\t@ instruction: 0xb722\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xb6e4\n+\t\t\t@ instruction: 0xb6f0\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb61e\n+\t\t\t@ instruction: 0xb62a\n \tmovs\tr1, r6\n-\tpush\t{r1, r2, r4, r6, r7, lr}\n+\tpush\t{r1, r5, r6, r7, lr}\n \tmovs\tr1, r6\n-\tbvc.n\td6594 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x323fc>\n+\tbvc.n\td65a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3240c>\n \tmovs\tr4, r6\n-\tpush\t{r2, r3, r4, r6, lr}\n+\tpush\t{r3, r5, r6, lr}\n \tmovs\tr1, r6\n-\tpush\t{r1, r3, r4, r5, lr}\n+\tpush\t{r1, r2, r6, lr}\n \tmovs\tr1, r6\n HashStatistics >::priv_sortByCountDown(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:258\n \tldr\tr3, [pc, #28]\t@ (d65d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3243c>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:260\n \tldr\tr4, [pc, #28]\t@ (d65d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x32440>)\n@@ -403552,15 +403552,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldr\tr6, [r4, #24]\n \tmovs\tr5, r7\n \tlsrs\tr4, r0, #31\n \tmovs\tr0, r0\n-\tpush\t{r1, r2, r7}\n+\tpush\t{r1, r4, r7}\n \tmovs\tr1, r6\n HashStatistics >::priv_sortLexByCount(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:264\n \tldr\tr3, [pc, #28]\t@ (d6600 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x32468>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:266\n \tldr\tr4, [pc, #28]\t@ (d6604 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3246c>)\n@@ -403578,15 +403578,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tldr\tr2, [r7, #20]\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #14\n \tmovs\tr0, r0\n-\tpush\t{r1, r3, r5, r6}\n+\tpush\t{r1, r2, r4, r5, r6}\n \tmovs\tr1, r6\n HashStatistics >::priv_compressHashStatBufferInPlace(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned int):\n ./src/mira/hashstats.C:940\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr\tr4, [pc, #944]\t@ (d69c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3282c>)\n \tvpush\t{d8}\n@@ -404286,15 +404286,15 @@\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r5, #84]\t@ 0x54\n \tmovs\tr5, r7\n \tstr\tr0, [r3, #80]\t@ 0x50\n \tmovs\tr5, r7\n-\tadd\tr7, sp, #792\t@ 0x318\n+\tadd\tr7, sp, #840\t@ 0x348\n \tmovs\tr1, r6\n \tlsrs\tr4, r5, #17\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -405930,51 +405930,51 @@\n ./src/mira/hashstats.C:808 (discriminator 10)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\td7966 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x337ce>\n \tb.n\td79ae , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x33816>\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #176\t@ (adr r4, d7a70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x338d8>)\n+\tadd\tr4, pc, #224\t@ (adr r4, d7aa0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x33908>)\n \tmovs\tr1, r6\n \tlsls\tr0, r3, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #776\t@ (adr r3, d7cd8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x33b40>)\n+\tadd\tr3, pc, #824\t@ (adr r3, d7d08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x33b70>)\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r7, #30]\n+\tstrb\tr0, [r1, #31]\n \tmovs\tr1, r6\n-\tstrb\tr4, [r5, #30]\n+\tstrb\tr0, [r7, #30]\n \tmovs\tr1, r6\n-\tstrb\tr4, [r4, #30]\n+\tstrb\tr0, [r6, #30]\n \tmovs\tr1, r6\n-\tstrb\tr2, [r4, #30]\n+\tstrb\tr6, [r5, #30]\n \tmovs\tr1, r6\n-\tstrb\tr0, [r2, #29]\n+\tstrb\tr4, [r3, #29]\n \tmovs\tr1, r6\n-\tstrb\tr0, [r0, #29]\n+\tstrb\tr4, [r1, #29]\n \tmovs\tr1, r6\n-\tstrb\tr0, [r7, #28]\n+\tstrb\tr4, [r0, #29]\n \tmovs\tr1, r6\n-\tstrb\tr6, [r6, #28]\n+\tstrb\tr2, [r0, #29]\n \tmovs\tr1, r6\n-\tstrb\tr4, [r6, #28]\n+\tstrb\tr0, [r0, #29]\n \tmovs\tr1, r6\n-\tstrb\tr0, [r3, #26]\n+\tstrb\tr4, [r4, #26]\n \tmovs\tr1, r6\n-\tstrb\tr2, [r5, #26]\n+\tstrb\tr6, [r6, #26]\n \tmovs\tr1, r6\n-\tstrb\tr0, [r3, #24]\n+\tstrb\tr4, [r4, #24]\n \tmovs\tr1, r6\n-\tstrb\tr2, [r5, #24]\n+\tstrb\tr6, [r6, #24]\n \tmovs\tr1, r6\n HashStatistics >::priv_hashes2disk(ReadPool&, bool, bool, bool, unsigned int):\n ./src/mira/hashstats.C:708\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr8, [pc, #796]\t@ d7d2c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x33b94>\n \tvpush\t{d8-d10}\n@@ -406359,37 +406359,37 @@\n \tmovs\tr0, r0\n \tstrb\tr0, [r1, r5]\n \tmovs\tr5, r7\n \tstrb\tr6, [r7, r4]\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrh\tr2, [r0, #20]\n+\tldrh\tr2, [r1, #20]\n \tmovs\tr2, r6\n-\tsubs\tr5, #112\t@ 0x70\n+\tsubs\tr5, #120\t@ 0x78\n \tmovs\tr3, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r3, #18]\n+\tstrb\tr4, [r4, #18]\n \tmovs\tr1, r6\n-\tstrb\tr2, [r7, #16]\n+\tstrb\tr6, [r0, #17]\n \tmovs\tr1, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrh\tr2, [r6, #2]\n+\tldrh\tr2, [r7, #2]\n \tmovs\tr2, r6\n-\tsubs\tr3, #92\t@ 0x5c\n+\tsubs\tr3, #100\t@ 0x64\n \tmovs\tr3, r6\n-\tstrb\tr2, [r4, #11]\n+\tstrb\tr6, [r5, #11]\n \tmovs\tr1, r6\n-\tstrb\tr2, [r2, #10]\n+\tstrb\tr6, [r3, #10]\n \tmovs\tr1, r6\n \tstrh\tr0, [r6, r1]\n \tmovs\tr5, r7\n-\tldr\tr5, [sp, #832]\t@ 0x340\n+\tldr\tr5, [sp, #880]\t@ 0x370\n \tmovs\tr1, r6\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tfp, [pc, #932]\t@ d8110 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x33f78>\n \tadd.w\tr9, sp, #144\t@ 0x90\n \tmov\tr0, r9\n \tmov.w\tsl, #0\n \tblx\tbcc4 \n@@ -406857,31 +406857,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #27\n+\tasrs\tr0, r7, #27\n \tmovs\tr1, r6\n-\tasrs\tr0, r5, #27\n+\tasrs\tr4, r6, #27\n \tmovs\tr1, r6\n-\tcmp\tr5, #38\t@ 0x26\n+\tcmp\tr5, #46\t@ 0x2e\n \tmovs\tr3, r6\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #23\n+\tasrs\tr0, r7, #23\n \tmovs\tr1, r6\n-\tasrs\tr0, r4, #23\n+\tasrs\tr4, r5, #23\n \tmovs\tr1, r6\n-\tsubs\tr5, #176\t@ 0xb0\n+\tsubs\tr5, #184\t@ 0xb8\n \tmovs\tr3, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_createHashStatisticsFile(std::__cxx11::basic_string, std::allocator > const&, std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::vector >&, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1090\n@@ -407482,35 +407482,35 @@\n \tmovs\tr0, r0\n \tldr\tr5, [pc, #992]\t@ (d8a0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34874>)\n \tmovs\tr5, r7\n \tldr\tr5, [pc, #920]\t@ (d89c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34830>)\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr0, [sp, #624]\t@ 0x270\n+\tldr\tr0, [sp, #672]\t@ 0x2a0\n \tmovs\tr1, r6\n-\tldrh\tr4, [r3, #38]\t@ 0x26\n+\tldrh\tr0, [r5, #38]\t@ 0x26\n \tmovs\tr1, r6\n-\tstrh\tr4, [r5, #14]\n+\tstrh\tr4, [r6, #14]\n \tmovs\tr2, r6\n-\tadds\tr4, #218\t@ 0xda\n+\tadds\tr4, #226\t@ 0xe2\n \tmovs\tr3, r6\n-\tldr\tr4, [r3, #68]\t@ 0x44\n+\tldr\tr0, [r5, #68]\t@ 0x44\n \tmovs\tr1, r6\n-\tldr\tr0, [sp, #112]\t@ 0x70\n+\tldr\tr0, [sp, #160]\t@ 0xa0\n \tmovs\tr1, r6\n-\tldrh\tr2, [r3, #26]\n+\tldrh\tr6, [r4, #26]\n \tmovs\tr1, r6\n-\tstr\tr7, [sp, #840]\t@ 0x348\n+\tstr\tr7, [sp, #888]\t@ 0x378\n \tmovs\tr1, r6\n-\tstr\tr6, [sp, #256]\t@ 0x100\n+\tstr\tr6, [sp, #304]\t@ 0x130\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr2, [r1, #24]\n+\tldr\tr6, [r2, #24]\n \tmovs\tr1, r6\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, sl\n \tblx\tb51c ::_M_widen_init() const@plt>\n /usr/include/c++/10/bits/locale_facets.h:877\n \tldr\tr0, [pc, #832]\t@ (d89a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34810>)\n \tldr\tr2, [sp, #28]\n@@ -407921,34 +407921,34 @@\n \tb.n\td88b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34720>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrb\tr2, [r1, #24]\n+\tldrb\tr2, [r2, #24]\n \tmovs\tr2, r6\n-\tadds\tr0, #248\t@ 0xf8\n+\tadds\tr1, #0\n \tmovs\tr3, r6\n-\tldr\tr6, [r7, #4]\n+\tldr\tr2, [r1, #8]\n \tmovs\tr1, r6\n-\tldr\tr0, [r6, #0]\n+\tldr\tr4, [r7, #0]\n \tmovs\tr1, r6\n-\tstr\tr4, [sp, #784]\t@ 0x310\n+\tstr\tr4, [sp, #832]\t@ 0x340\n \tmovs\tr1, r6\n-\tmrc2\t0, 1, r0, cr4, cr5, {1}\n-\tstr\tr4, [sp, #888]\t@ 0x378\n+\tmrc2\t0, 1, r0, cr12, cr5, {1}\n+\tstr\tr4, [sp, #936]\t@ 0x3a8\n \tmovs\tr1, r6\n-\tstr\tr4, [sp, #688]\t@ 0x2b0\n+\tstr\tr4, [sp, #736]\t@ 0x2e0\n \tmovs\tr1, r6\n-\tstr\tr4, [sp, #456]\t@ 0x1c8\n+\tstr\tr4, [sp, #504]\t@ 0x1f8\n \tmovs\tr1, r6\n-\tstr\tr4, [sp, #208]\t@ 0xd0\n+\tstr\tr4, [sp, #256]\t@ 0x100\n \tmovs\tr1, r6\n-\tstr\tr3, [sp, #984]\t@ 0x3d8\n+\tstr\tr4, [sp, #8]\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmov\tr6, r8\n \tmovs\tr5, r7\n /usr/include/c++/10/bits/locale_facets.h:876\n \tldr.w\tr8, [pc, #1132]\t@ d8e50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34cb8>\n@@ -408544,43 +408544,43 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\td8dca , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34c32>\n \tb.n\td8ddc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34c44>\n \tb.n\td8dca , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34c32>\n \tb.n\td8ddc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x34c44>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #432]\t@ 0x1b0\n+\tstr\tr0, [sp, #480]\t@ 0x1e0\n \tmovs\tr1, r6\n \tlsls\tr4, r1, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr2, [r0, #32]\n+\tstrh\tr6, [r1, #32]\n \tmovs\tr1, r6\n-\tstr\tr0, [sp, #272]\t@ 0x110\n+\tstr\tr0, [sp, #320]\t@ 0x140\n \tmovs\tr1, r6\n-\tstrh\tr0, [r3, #44]\t@ 0x2c\n+\tstrh\tr4, [r4, #44]\t@ 0x2c\n \tmovs\tr1, r6\n-\tstr\tr0, [sp, #96]\t@ 0x60\n+\tstr\tr0, [sp, #144]\t@ 0x90\n \tmovs\tr1, r6\n-\tstr\tr0, [sp, #24]\n+\tstr\tr0, [sp, #72]\t@ 0x48\n \tmovs\tr1, r6\n-\tstr\tr0, [sp, #0]\n+\tstr\tr0, [sp, #48]\t@ 0x30\n \tmovs\tr1, r6\n-\tstrh\tr6, [r5, #12]\n+\tstrh\tr2, [r7, #12]\n \tmovs\tr1, r6\n-\tstrh\tr2, [r0, #18]\n+\tstrh\tr6, [r1, #18]\n \tmovs\tr1, r6\n-\tldrh\tr2, [r6, #48]\t@ 0x30\n+\tldrh\tr6, [r7, #48]\t@ 0x30\n \tmovs\tr1, r6\n-\tstrh\tr4, [r0, #14]\n+\tstrh\tr0, [r2, #14]\n \tmovs\tr1, r6\n-\tldrh\tr4, [r1, #54]\t@ 0x36\n+\tldrh\tr0, [r3, #54]\t@ 0x36\n \tmovs\tr1, r6\n HashStatistics >::prepareStreamFinalise(unsigned int, unsigned int):\n ./src/mira/hashstats.C:522\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr6, [pc, #956]\t@ (d9254 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x350bc>)\n \tvpush\t{d8-d9}\n@@ -409038,41 +409038,41 @@\n \teors\tr1, r3\n \tmovs\tr1, r0\n \tmovs\tr0, r0\n \tlsrs\tr0, r0\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr6, [r6, #48]\t@ 0x30\n+\tldrh\tr2, [r0, #50]\t@ 0x32\n \tmovs\tr1, r6\n-\tstrb\tr6, [r4, #23]\n+\tstrb\tr6, [r5, #23]\n \tmovs\tr2, r6\n-\tcmp\tr0, #208\t@ 0xd0\n+\tcmp\tr0, #216\t@ 0xd8\n \tmovs\tr3, r6\n-\tstr\tr4, [r2, #4]\n+\tstr\tr0, [r4, #4]\n \tmovs\tr1, r6\n-\tldrsh\tr6, [r5, r6]\n+\tldrsh\tr2, [r7, r6]\n \tmovs\tr1, r6\n-\tstrb\tr4, [r3, #17]\n+\tstrb\tr4, [r4, #17]\n \tmovs\tr2, r6\n-\tmovs\tr7, #74\t@ 0x4a\n+\tmovs\tr7, #82\t@ 0x52\n \tmovs\tr3, r6\n-\tldrsh\tr0, [r2, r3]\n+\tldrsh\tr4, [r3, r3]\n \tmovs\tr1, r6\n-\tldrsh\tr0, [r0, r2]\n+\tldrsh\tr4, [r1, r2]\n \tmovs\tr1, r6\n-\tlsls\tr2, r5, #18\n+\tlsls\tr6, r6, #18\n \tmovs\tr1, r6\n-\tldrh\tr6, [r6, #30]\n+\tldrh\tr2, [r0, #32]\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrh\tr0, [r1, #24]\n+\tldrh\tr4, [r2, #24]\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xf3de0031\n+\t\t\t@ instruction: 0xf3e60031\n HashStatistics >::computeHashStatistics(ReadPool&, int, bool, bool, bool, unsigned int, unsigned int, unsigned int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:350\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r3\n \tldr\tr5, [pc, #520]\t@ (d94a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3530c>)\n ./src/mira/hashstats.C:354\n \tmov\tr3, r2\n@@ -409343,15 +409343,15 @@\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr4, #130\t@ 0x82\n \tmovs\tr5, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr6, [r2, #18]\n+\tldrh\tr2, [r4, #18]\n \tmovs\tr1, r6\n \tsubs\tr4, #76\t@ 0x4c\n \tmovs\tr5, r7\n \tsubs\tr4, #42\t@ 0x2a\n \tmovs\tr5, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -409359,15 +409359,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r2, #40]\t@ 0x28\n+\tstrh\tr0, [r4, #40]\t@ 0x28\n \tmovs\tr1, r6\n \tlsrs\tr4, r7, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -409984,21 +409984,21 @@\n \tmovs\tr5, r7\n \tsubs\tr2, #80\t@ 0x50\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrh\tr6, [r5, #60]\t@ 0x3c\n+\tstrh\tr2, [r7, #60]\t@ 0x3c\n \tmovs\tr1, r6\n-\tstrh\tr4, [r1, #60]\t@ 0x3c\n+\tstrh\tr0, [r3, #60]\t@ 0x3c\n \tmovs\tr1, r6\n-\tstrh\tr0, [r4, #58]\t@ 0x3a\n+\tstrh\tr4, [r5, #58]\t@ 0x3a\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xf3ba0031\n+\t\t\t@ instruction: 0xf3c20031\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n ./src/mira/hashstats.C:458\n \tmov\tr0, r5\n \tbl\t1e8e08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4afd4>\n@@ -410459,27 +410459,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbne.n\td9d68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x35bd0>\n+\tbne.n\td9d80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x35be8>\n \tmovs\tr0, r6\n-\tbne.n\td9d68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x35bd0>\n+\tbne.n\td9d80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x35be8>\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n+\tldrsh.w\tr0, [lr, r0, lsl #3]\n \tldrsh.w\tr0, [r2, r0, lsl #3]\n-\tvld4.8\t{d0-d3}, [r6 :256], r0\n-\tmovs\tr0, #244\t@ 0xf4\n+\tmovs\tr0, #252\t@ 0xfc\n \tmovs\tr3, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr5, [sp, #88]\t@ 0x58\n@@ -411072,27 +411072,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r4}\n+\tldmia\tr5!, {r2, r3, r4}\n \tmovs\tr0, r6\n-\tldmia\tr5!, {r1, r2, r3}\n+\tldmia\tr5!, {r1, r3, r4}\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n+\tadds.w\tr0, r4, #11534336\t@ 0xb00000\n \tadd.w\tr0, r8, #11534336\t@ 0xb00000\n-\t\t\t@ instruction: 0xf4fc0030\n-\tadds\tr2, r1, #3\n+\tadds\tr2, r2, #3\n \tmovs\tr3, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, r6\n@@ -411557,29 +411557,29 @@\n \tb.n\tda35e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x361c6>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\tda3b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3621c>\n \tb.n\tda3be , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x36226>\n \tb.n\tda3c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3622c>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrb\tr2, [r0, #14]\n+\tldrb\tr6, [r1, #14]\n \tmovs\tr1, r6\n-\tldrb\tr0, [r4, #14]\n+\tldrb\tr4, [r5, #14]\n \tmovs\tr1, r6\n \tlsrs\tr0, r5, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrex\tr0, r0, [ip, #192]\t@ 0xc0\n-\tstrex\tr0, r0, [r4, #192]\t@ 0xc0\n-\tldrb\tr4, [r3, #10]\n+\t\t\t@ instruction: 0xe8580030\n+\t\t\t@ instruction: 0xe8500030\n+\tldrb\tr0, [r5, #10]\n \tmovs\tr1, r6\n-\tldmia\tr0!, {r1, r3, r4, r6, r7}\n+\tldmia\tr0!, {r1, r2, r5, r6, r7}\n \tmovs\tr0, r6\n HashStatistics >::priv_sortMaskUp(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:270\n \tpush\t{r4, lr}\n \tldr.w\tip, [pc, #40]\t@ da530 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x36398>\n \tsub\tsp, #8\n \tadd\tip, pc\n@@ -411600,15 +411600,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tcmp\tr2, #84\t@ 0x54\n \tmovs\tr5, r7\n \tlsls\tr0, r5, #29\n \tmovs\tr0, r0\n-\tldrb\tr4, [r5, #3]\n+\tldrb\tr0, [r7, #3]\n \tmovs\tr1, r6\n HashStatistics >::calcKMerForks(unsigned int, bool):\n ./src/mira/hashstats.C:2001\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr0, [pc, #1220]\t@ daa08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x36870>\n \tldr.w\tr3, [pc, #1220]\t@ daa0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x36874>\n@@ -412130,19 +412130,19 @@\n \tmovs\tr0, r0\n \tcmp\tr2, #8\n \tmovs\tr5, r7\n \tlsrs\tr4, r0, #12\n \tmovs\tr0, r0\n \tstrb\tr0, [r3, #29]\n \tmovs\tr5, r7\n-\tstrb\tr6, [r4, #24]\n+\tstrb\tr2, [r6, #24]\n \tmovs\tr1, r6\n \tstrb\tr6, [r3, #26]\n \tmovs\tr5, r7\n-\tstrb\tr6, [r6, #21]\n+\tstrb\tr2, [r0, #22]\n \tmovs\tr1, r6\n \tmovs\tr6, #136\t@ 0x88\n \tmovs\tr5, r7\n \tmovs\tr5, #122\t@ 0x7a\n \tmovs\tr5, r7\n HashStatistics >::assignReadBaseStatistics_MultiThread(ReadPool&, unsigned int, bool, unsigned int, bool):\n ./src/mira/hashstats.C:2236\n@@ -412983,35 +412983,35 @@\n \tmovs\tr0, r0\n \tlsls\tr0, r4, #27\n \tmovs\tr0, r0\n \tlsls\tr4, r4, #27\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #6\n \tmovs\tr0, r0\n-\tldrsb\tr4, [r3, r6]\n+\tldrsb\tr4, [r4, r6]\n \tmovs\tr2, r6\n-\tlsrs\tr2, r0, #10\n+\tlsrs\tr2, r1, #10\n \tmovs\tr3, r6\n-\ttst\tr2, r0\n+\ttst\tr6, r1\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tldrh\tr0, [r7, r0]\n+\tldrh\tr4, [r0, r1]\n \tmovs\tr1, r6\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tldr\tr6, [r0, r7]\n+\tldr\tr2, [r2, r7]\n \tmovs\tr1, r6\n-\tldrsb\tr0, [r2, r6]\n+\tldrsb\tr4, [r3, r6]\n \tmovs\tr1, r6\n-\tldrsb\tr6, [r1, r7]\n+\tldrsb\tr2, [r3, r7]\n \tmovs\tr1, r6\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s23\n \tmovs\tr2, #2\n \tmov\tr0, sl\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n /usr/include/c++/10/ostream:185\n@@ -413698,133 +413698,133 @@\n \tldr\tr7, [sp, #12]\n \tldr\tr0, [r7, #4]\n \tcmp\tr0, #0\n \tbeq.n\tdb51e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x37386>\n \tbl\t997cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65a94>\n \tb.n\tdb51e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x37386>\n \tnop\n-\tsubs\tr6, #142\t@ 0x8e\n+\tsubs\tr6, #154\t@ 0x9a\n \tmovs\tr1, r6\n \tadds\tr4, r1, #7\n \tmovs\tr5, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr6, [r5, r3]\n+\tstrh\tr6, [r6, r3]\n \tmovs\tr2, r6\n-\tlsls\tr2, r3, #23\n+\tlsls\tr2, r4, #23\n \tmovs\tr3, r6\n-\tsubs\tr5, #96\t@ 0x60\n+\tsubs\tr5, #108\t@ 0x6c\n \tmovs\tr1, r6\n-\tsubs\tr4, #238\t@ 0xee\n+\tsubs\tr4, #250\t@ 0xfa\n \tmovs\tr1, r6\n-\tb.n\tdb928 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x37790>\n+\tb.n\tdb940 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x377a8>\n \tmovs\tr0, r6\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tldr\tr6, [r1, #52]\t@ 0x34\n+\tldr\tr2, [r3, #52]\t@ 0x34\n \tmovs\tr1, r6\n \tlsrs\tr4, r5, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\tdb830 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x37698>\n+\tb.n\tdb848 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x376b0>\n \tmovs\tr0, r6\n-\tldr\tr6, [r1, r0]\n+\tldr\tr2, [r3, r0]\n \tmovs\tr1, r6\n-\tldr\tr4, [r4, r1]\n+\tldr\tr0, [r6, r1]\n \tmovs\tr1, r6\n-\tldrsb\tr2, [r2, r5]\n+\tldrsb\tr6, [r3, r5]\n \tmovs\tr1, r6\n-\tstrb\tr0, [r4, r3]\n+\tstrb\tr4, [r5, r3]\n \tmovs\tr1, r6\n-\tb.n\tdb7ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x37614>\n+\tb.n\tdb7c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3762c>\n \tmovs\tr0, r6\n-\tldr\tr6, [r4, r4]\n+\tldr\tr2, [r6, r4]\n \tmovs\tr1, r6\n-\tldr\tr0, [r1, r2]\n+\tldr\tr4, [r2, r2]\n \tmovs\tr1, r6\n-\tldr\tr2, [r2, r5]\n+\tldr\tr6, [r3, r5]\n \tmovs\tr1, r6\n-\tldr\tr6, [r5, #44]\t@ 0x2c\n+\tldr\tr2, [r7, #44]\t@ 0x2c\n \tmovs\tr1, r6\n-\tldrsb\tr6, [r2, r0]\n+\tldrsb\tr2, [r4, r0]\n \tmovs\tr1, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tldrsb\tr4, [r3, r3]\n+\tldrsb\tr0, [r5, r3]\n \tmovs\tr1, r6\n-\tldrsb\tr6, [r2, r4]\n+\tldrsb\tr2, [r4, r4]\n \tmovs\tr1, r6\n-\tldrsb\tr0, [r1, r5]\n+\tldrsb\tr4, [r2, r5]\n \tmovs\tr1, r6\n-\tstmia\tr3!, {r1, r2, r3, r4, r7}\n+\tstmia\tr3!, {r1, r3, r5, r7}\n \tmovs\tr0, r6\n-\tstmia\tr3!, {r2, r4, r5, r7}\n+\tstmia\tr3!, {r6, r7}\n \tmovs\tr0, r6\n-\tstmia\tr3!, {r1, r2, r3, r4, r6, r7}\n+\tstmia\tr3!, {r1, r3, r5, r6, r7}\n \tmovs\tr0, r6\n-\tstrh\tr0, [r4, r3]\n+\tstrh\tr4, [r5, r3]\n \tmovs\tr1, r6\n-\tstrh\tr2, [r2, r4]\n+\tstrh\tr6, [r3, r4]\n \tmovs\tr1, r6\n-\tstrh\tr0, [r0, r6]\n+\tstrh\tr4, [r1, r6]\n \tmovs\tr1, r6\n-\tstrh\tr6, [r1, r3]\n+\tstrh\tr2, [r3, r3]\n \tmovs\tr1, r6\n-\tstrh\tr0, [r0, r4]\n+\tstrh\tr4, [r1, r4]\n \tmovs\tr1, r6\n-\tstrh\tr6, [r7, r4]\n+\tstrh\tr2, [r1, r5]\n \tmovs\tr1, r6\n-\tldrsb\tr0, [r2, r2]\n+\tldrsb\tr4, [r3, r2]\n \tmovs\tr1, r6\n-\tldrsb\tr2, [r1, r3]\n+\tldrsb\tr6, [r2, r3]\n \tmovs\tr1, r6\n-\tldrsb\tr0, [r3, r4]\n+\tldrsb\tr4, [r4, r4]\n \tmovs\tr1, r6\n-\tldrsb\tr6, [r5, r6]\n+\tldrsb\tr2, [r7, r6]\n \tmovs\tr1, r6\n-\tldrsb\tr4, [r3, r7]\n+\tldrsb\tr0, [r5, r7]\n \tmovs\tr1, r6\n-\tldr\tr6, [r2, r0]\n+\tldr\tr2, [r4, r0]\n \tmovs\tr1, r6\n-\tstrh\tr0, [r3, r1]\n+\tstrh\tr4, [r4, r1]\n \tmovs\tr1, r6\n-\tstmia\tr3!, {r1, r3, r4, r6}\n+\tstmia\tr3!, {r1, r2, r5, r6}\n \tmovs\tr0, r6\n-\tstrh\tr0, [r6, r1]\n+\tstrh\tr4, [r7, r1]\n \tmovs\tr1, r6\n-\tldr\tr2, [r3, r0]\n+\tldr\tr6, [r4, r0]\n \tmovs\tr1, r6\n-\tldrsb\tr0, [r1, r5]\n+\tldrsb\tr4, [r2, r5]\n \tmovs\tr1, r6\n-\trors\tr2, r6\n+\trors\tr6, r7\n \tmovs\tr1, r6\n-\tstrb\tr0, [r4, r0]\n+\tstrb\tr4, [r5, r0]\n \tmovs\tr1, r6\n-\tstrb\tr6, [r2, r1]\n+\tstrb\tr2, [r4, r1]\n \tmovs\tr1, r6\n-\tstrb\tr4, [r1, r2]\n+\tstrb\tr0, [r3, r2]\n \tmovs\tr1, r6\n-\tldrsb\tr6, [r6, r0]\n+\tldrsb\tr2, [r0, r1]\n \tmovs\tr1, r6\n-\tldrsb\tr0, [r6, r1]\n+\tldrsb\tr4, [r7, r1]\n \tmovs\tr1, r6\n-\tldrsb\tr6, [r5, r2]\n+\tldrsb\tr2, [r7, r2]\n \tmovs\tr1, r6\n-\tstrh\tr4, [r7, r7]\n+\tstrb\tr0, [r1, r0]\n \tmovs\tr1, r6\n-\tstrb\tr2, [r6, r0]\n+\tstrb\tr6, [r7, r0]\n \tmovs\tr1, r6\n-\tstrb\tr0, [r2, r2]\n+\tstrb\tr4, [r3, r2]\n \tmovs\tr1, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n void std::__adjust_heap<__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, int, HashStatistics >::hashstat_t, __gnu_cxx::__ops::_Iter_comp_iter >::hashstat_t const&, HashStatistics >::hashstat_t const&)> >(__gnu_cxx::__normal_iterator >::hashstat_t*, std::vector >::hashstat_t, std::allocator >::hashstat_t> > >, int, int, HashStatistics >::hashstat_t, __gnu_cxx::__ops::_Iter_comp_iter >::hashstat_t const&, HashStatistics >::hashstat_t const&)>):\n /usr/include/c++/10/bits/stl_heap.h:223\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr3, r2\n@@ -414936,15 +414936,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tlsrs\tr2, r0, #30\n \tmovs\tr5, r7\n \tasrs\tr0, r4, #32\n \tmovs\tr0, r0\n-\tldr\tr6, [r0, r5]\n+\tldr\tr2, [r2, r5]\n \tmovs\tr1, r6\n HashStatistics >::priv_makeHashStatArrayShortcuts():\n ./src/mira/hashstats.C:2169\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr1, [pc, #1112]\t@ dc464 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x382cc>\n \tvpush\t{d8}\n \tsub\tsp, #356\t@ 0x164\n@@ -415491,15 +415491,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr0, [r1, r6]\n+\tstrb\tr4, [r2, r6]\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -416424,33 +416424,33 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\tdcc38 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x38aa0>\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr3, #230\t@ 0xe6\n+\tmovs\tr3, #242\t@ 0xf2\n \tmovs\tr1, r6\n-\tmovs\tr3, #214\t@ 0xd6\n+\tmovs\tr3, #226\t@ 0xe2\n \tmovs\tr1, r6\n-\tmovs\tr3, #206\t@ 0xce\n+\tmovs\tr3, #218\t@ 0xda\n \tmovs\tr1, r6\n-\tmovs\tr3, #202\t@ 0xca\n+\tmovs\tr3, #214\t@ 0xd6\n \tmovs\tr1, r6\n-\tmovs\tr3, #48\t@ 0x30\n+\tmovs\tr3, #60\t@ 0x3c\n \tmovs\tr1, r6\n-\tmovs\tr3, #64\t@ 0x40\n+\tmovs\tr3, #76\t@ 0x4c\n \tmovs\tr1, r6\n \tlsrs\tr4, r6, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr3, #50\t@ 0x32\n+\tmovs\tr3, #62\t@ 0x3e\n \tmovs\tr1, r6\n HashStatistics >::findVHash(HashStatistics >::hashstat_t const&):\n ./src/mira/hashstats.C:2980\n \tldr\tr2, [pc, #1004]\t@ (dd074 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x38edc>)\n \tldr\tr3, [pc, #1008]\t@ (dd078 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x38ee0>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -416981,15 +416981,15 @@\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #11\n \tmovs\tr5, r7\n \tlsrs\tr4, r1, #30\n \tmovs\tr0, r0\n \tlsls\tr4, r7, #2\n \tmovs\tr5, r7\n-\tldr\tr1, [pc, #456]\t@ (dd254 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x390bc>)\n+\tldr\tr1, [pc, #504]\t@ (dd284 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x390ec>)\n \tmovs\tr1, r6\n \tlsrs\tr0, r4, #7\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -417463,17 +417463,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmov\tr6, r6\n+\tmov\tr2, r8\n \tmovs\tr1, r6\n-\tmov\tr0, r7\n+\tmov\tr4, r8\n \tmovs\tr1, r6\n \tlsrs\tr0, r6, #19\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -418245,17 +418245,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr4, r2\n+\tlsrs\tr0, r4\n \tmovs\tr1, r6\n-\tlsrs\tr6, r2\n+\tlsrs\tr2, r4\n \tmovs\tr1, r6\n \tlsrs\tr4, r5, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -418278,15 +418278,15 @@\n ./src/mira/hashstats.C:250\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \torns\tr0, sl, #12320768\t@ 0xbc0000\n \tlsrs\tr4, r2, #3\n \tmovs\tr0, r0\n-\tsubs\tr6, #198\t@ 0xc6\n+\tsubs\tr6, #210\t@ 0xd2\n \tmovs\tr1, r6\n HashStatistics >::priv_sortByCountUp(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:252\n \tldr\tr3, [pc, #28]\t@ (ddb2c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x39994>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:254\n \tldr\tr4, [pc, #28]\t@ (ddb30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x39998>)\n@@ -418303,15 +418303,15 @@\n ./src/mira/hashstats.C:256\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \torr.w\tr0, lr, #12320768\t@ 0xbc0000\n \tlsrs\tr0, r3, #30\n \tmovs\tr0, r0\n-\tsubs\tr6, #178\t@ 0xb2\n+\tsubs\tr6, #190\t@ 0xbe\n \tmovs\tr1, r6\n HashStatistics >::priv_calcAvgHashFreq(bool):\n ./src/mira/hashstats.C:1494\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n ./src/mira/../../src/mira/hashstats.H:461\n \tadd.w\tr7, r0, #152\t@ 0x98\n@@ -418854,37 +418854,37 @@\n \tb.n\tddefa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x39d62>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \t\t\t@ instruction: 0xf3fc003c\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr5, #230\t@ 0xe6\n+\tsubs\tr5, #242\t@ 0xf2\n \tmovs\tr1, r6\n-\tsubs\tr5, #164\t@ 0xa4\n+\tsubs\tr5, #176\t@ 0xb0\n \tmovs\tr1, r6\n-\tldrsh\tr6, [r4, r7]\n+\tldrsh\tr6, [r5, r7]\n \tmovs\tr4, r6\n-\tsubs\tr5, #68\t@ 0x44\n+\tsubs\tr5, #80\t@ 0x50\n \tmovs\tr1, r6\n-\tsubs\tr5, #38\t@ 0x26\n+\tsubs\tr5, #50\t@ 0x32\n \tmovs\tr1, r6\n-\tsubs\tr4, #244\t@ 0xf4\n+\tsubs\tr5, #0\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsubs\tr4, #46\t@ 0x2e\n+\tsubs\tr4, #58\t@ 0x3a\n \tmovs\tr1, r6\n-\tsubs\tr3, #230\t@ 0xe6\n+\tsubs\tr3, #242\t@ 0xf2\n \tmovs\tr1, r6\n-\tldrsh\tr4, [r0, r0]\n+\tldrsh\tr4, [r1, r0]\n \tmovs\tr4, r6\n-\tsubs\tr3, #108\t@ 0x6c\n+\tsubs\tr3, #120\t@ 0x78\n \tmovs\tr1, r6\n-\tsubs\tr3, #74\t@ 0x4a\n+\tsubs\tr3, #86\t@ 0x56\n \tmovs\tr1, r6\n HashStatistics >::priv_sortByCountDown(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:258\n \tldr\tr3, [pc, #28]\t@ (ddfcc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x39e34>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:260\n \tldr\tr4, [pc, #28]\t@ (ddfd0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x39e38>)\n@@ -418901,15 +418901,15 @@\n ./src/mira/hashstats.C:262\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tvshr.s32\td0, d28, #18\n \tlsrs\tr0, r3, #12\n \tmovs\tr0, r0\n-\tsubs\tr2, #142\t@ 0x8e\n+\tsubs\tr2, #154\t@ 0x9a\n \tmovs\tr1, r6\n HashStatistics >::priv_sortLexByCount(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:264\n \tldr\tr3, [pc, #28]\t@ (ddff8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x39e60>)\n \tpush\t{r4, lr}\n ./src/mira/hashstats.C:266\n \tldr\tr4, [pc, #28]\t@ (ddffc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x39e64>)\n@@ -418926,15 +418926,15 @@\n ./src/mira/hashstats.C:268\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tvmvn.i32\td0, #44\t@ 0x0000002c\n \tlsrs\tr4, r0, #21\n \tmovs\tr0, r0\n-\tsubs\tr2, #114\t@ 0x72\n+\tsubs\tr2, #126\t@ 0x7e\n \tmovs\tr1, r6\n HashStatistics >::priv_compressHashStatBufferInPlace(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned int):\n ./src/mira/hashstats.C:940\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr4, [pc, #1068]\t@ de438 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3a2a0>\n \tvpush\t{d8}\n@@ -419677,15 +419677,15 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\tde57c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3a3e4>\n \tadd.w\tr0, r6, ip, rrx\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xeaf8003c\n \t\t\t@ instruction: 0xeaa4003c\n-\tadds\tr5, #82\t@ 0x52\n+\tadds\tr5, #94\t@ 0x5e\n \tmovs\tr1, r6\n \tlsrs\tr0, r3, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -422095,39 +422095,39 @@\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\tdfbc2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ba2a>\n \tb.n\tdfc08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ba70>\n \tnop\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n-\tmovs\tr1, #186\t@ 0xba\n+\tmovs\tr1, #198\t@ 0xc6\n \tmovs\tr1, r6\n \tlsrs\tr0, r0, #5\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr1, #84\t@ 0x54\n+\tmovs\tr1, #96\t@ 0x60\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadcs.w\tr0, r6, #11534336\t@ 0xb00000\n-\tadc.w\tr0, r6, #11534336\t@ 0xb00000\n-\t\t\t@ instruction: 0xf53e0030\n-\t\t\t@ instruction: 0xf53c0030\n-\t\t\t@ instruction: 0xf4ee0030\n+\tsbc.w\tr0, r2, #11534336\t@ 0xb00000\n+\tadcs.w\tr0, r2, #11534336\t@ 0xb00000\n+\tadc.w\tr0, sl, #11534336\t@ 0xb00000\n+\tadc.w\tr0, r8, #11534336\t@ 0xb00000\n+\t\t\t@ instruction: 0xf4fa0030\n+\t\t\t@ instruction: 0xf4ea0030\n+\t\t\t@ instruction: 0xf4e20030\n+\t\t\t@ instruction: 0xf4e00030\n \t\t\t@ instruction: 0xf4de0030\n-\t\t\t@ instruction: 0xf4d60030\n-\t\t\t@ instruction: 0xf4d40030\n-\t\t\t@ instruction: 0xf4d20030\n-\tbics.w\tr0, r6, #11534336\t@ 0xb00000\n-\torr.w\tr0, r8, #11534336\t@ 0xb00000\n-\t\t\t@ instruction: 0xf3b60030\n-\t\t\t@ instruction: 0xf3c80030\n+\torr.w\tr0, r2, #11534336\t@ 0xb00000\n+\torrs.w\tr0, r4, #11534336\t@ 0xb00000\n+\t\t\t@ instruction: 0xf3c20030\n+\t\t\t@ instruction: 0xf3d40030\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_hashes2disk(ReadPool&, bool, bool, bool, unsigned int):\n ./src/mira/hashstats.C:708\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr8, [pc, #796]\t@ dff8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3bdf4>\n@@ -422513,33 +422513,33 @@\n \tmovs\tr0, r0\n \tbcs.n\tdff60 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3bdc8>\n \tmovs\tr4, r7\n \tbcs.n\tdff50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3bdb8>\n \tmovs\tr4, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr2, r4, #32\n+\tlsrs\tr2, r5, #32\n \tmovs\tr2, r6\n-\tcbnz\tr0, dffe4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3be4c>\n+\tcbnz\tr0, dffe6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3be4e>\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf2380030\n-\trsbs\tr0, sl, #48\t@ 0x30\n+\tmovw\tr0, #16432\t@ 0x4030\n+\t\t\t@ instruction: 0xf1e60030\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tlsls\tr2, r2, #24\n+\tlsls\tr2, r3, #24\n \tmovs\tr2, r6\n-\t\t\t@ instruction: 0xb8fc\n+\tcbnz\tr4, dffb8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3be20>\n \tmovs\tr2, r6\n-\teor.w\tr0, r2, #48\t@ 0x30\n-\tbics.w\tr0, r2, #48\t@ 0x30\n+\teor.w\tr0, lr, #48\t@ 0x30\n+\tbics.w\tr0, lr, #48\t@ 0x30\n \tbeq.n\tdffe4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3be4c>\n \tmovs\tr4, r7\n-\tsubs\tr0, r6, r5\n+\tsubs\tr4, r7, r5\n \tmovs\tr1, r6\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tfp, [pc, #932]\t@ e0370 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3c1d8>\n \tadd.w\tr9, sp, #144\t@ 0x90\n \tmov\tr0, r9\n \tmov.w\tsl, #0\n \tblx\tbcc4 \n@@ -423007,31 +423007,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #560]\t@ 0x230\n+\tstr\tr4, [sp, #608]\t@ 0x260\n \tmovs\tr0, r6\n-\tstr\tr4, [sp, #544]\t@ 0x220\n+\tstr\tr4, [sp, #592]\t@ 0x250\n \tmovs\tr0, r6\n-\tadd\tr2, sp, #792\t@ 0x318\n+\tadd\tr2, sp, #824\t@ 0x338\n \tmovs\tr2, r6\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #560]\t@ 0x230\n+\tstr\tr3, [sp, #608]\t@ 0x260\n \tmovs\tr0, r6\n-\tstr\tr3, [sp, #512]\t@ 0x200\n+\tstr\tr3, [sp, #560]\t@ 0x230\n \tmovs\tr0, r6\n-\tcbnz\tr0, e03fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3c264>\n+\tcbnz\tr0, e03fe , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3c266>\n \tmovs\tr2, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::priv_createHashStatisticsFile(std::__cxx11::basic_string, std::allocator > const&, std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::vector >&, unsigned int, unsigned int):\n ./src/mira/hashstats.C:1090\n@@ -423626,34 +423626,34 @@\n \tmovs\tr0, r0\n \tldmia\tr3, {r3, r4, r7}\n \tmovs\tr4, r7\n \tldmia\tr3!, {r1, r2, r7}\n \tmovs\tr4, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr4, r7, #24\n+\tasrs\tr0, r1, #25\n \tmovs\tr1, r6\n-\tlsrs\tr4, r7, #9\n+\tlsrs\tr0, r1, #10\n \tmovs\tr1, r6\n-\tvshr.u8\td0, d17, #8\n-\tsxtb\tr6, r6\n+\tvshr.u16\td0, d17, #16\n+\tsxtb\tr6, r7\n \tmovs\tr2, r6\n-\t\t\t@ instruction: 0xe9a40030\n-\tasrs\tr0, r6, #20\n+\t\t\t@ instruction: 0xe9b00030\n+\tasrs\tr4, r7, #20\n \tmovs\tr1, r6\n-\tasrs\tr0, r4, #19\n+\tasrs\tr4, r5, #19\n \tmovs\tr1, r6\n-\tlsrs\tr2, r3, #32\n+\tlsrs\tr6, r4, #32\n \tmovs\tr1, r6\n-\tasrs\tr6, r3, #18\n+\tasrs\tr2, r5, #18\n \tmovs\tr1, r6\n-\tldc2\t0, cr0, [r4], {49}\t@ 0x31\n-\tadd\tr7, sp, #520\t@ 0x208\n+\tldc2\t0, cr0, [ip], {49}\t@ 0x31\n+\tadd\tr7, sp, #552\t@ 0x228\n \tmovs\tr2, r6\n-\tb.n\te06c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3c52c>\n+\tb.n\te06dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3c544>\n \tmovs\tr0, r6\n \tadds\tr3, #25\n \tmovs\tr2, #1\n \tmov\tr0, r5\n ./src/mira/../../src/util/progressindic.H:125\n \tuxtb\tr3, r3\n \tcmp\tr3, #50\t@ 0x32\n@@ -424658,65 +424658,65 @@\n \tb.n\te1080 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3cee8>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\te100c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ce74>\n \tb.n\te101e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ce86>\n \tb.n\te100c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ce74>\n \tb.n\te101e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ce86>\n \tnop\n-\tb.n\te0d70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3cbd8>\n+\tb.n\te0d88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3cbf0>\n \tmovs\tr0, r6\n-\tasrs\tr6, r7, #11\n+\tasrs\tr2, r1, #12\n \tmovs\tr1, r6\n-\tldrb\tr4, [r5, #17]\n+\tldrb\tr4, [r6, #17]\n \tmovs\tr5, r6\n-\tasrs\tr4, r2, #12\n+\tasrs\tr0, r4, #12\n \tmovs\tr1, r6\n-\tasrs\tr0, r4, #11\n+\tasrs\tr4, r5, #11\n \tmovs\tr1, r6\n-\tasrs\tr4, r4, #10\n+\tasrs\tr0, r6, #10\n \tmovs\tr1, r6\n-\tasrs\tr4, r4, #9\n+\tasrs\tr0, r6, #9\n \tmovs\tr1, r6\n-\tasrs\tr2, r4, #8\n+\tasrs\tr6, r5, #8\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr4!, {r1, r3, r5, r6}\n \tmovs\tr4, r7\n-\tb.n\te0948 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3c7b0>\n+\tb.n\te0960 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3c7c8>\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsrs\tr2, r5, #24\n+\tlsrs\tr6, r6, #24\n \tmovs\tr1, r6\n \tasrs\tr4, r2, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr0, r0, #7\n+\tlsls\tr4, r1, #7\n \tmovs\tr1, r6\n-\tlsrs\tr2, r0, #24\n+\tlsrs\tr6, r1, #24\n \tmovs\tr1, r6\n-\tlsls\tr6, r2, #13\n+\tlsls\tr2, r4, #13\n \tmovs\tr1, r6\n-\tlsrs\tr6, r2, #23\n+\tlsrs\tr2, r4, #23\n \tmovs\tr1, r6\n-\tlsrs\tr4, r0, #23\n+\tlsrs\tr0, r2, #23\n \tmovs\tr1, r6\n-\tlsrs\tr6, r7, #22\n+\tlsrs\tr2, r1, #23\n \tmovs\tr1, r6\n-\tvqadd.u32\td16, d12, d16\n-\tmovs\tr0, r0\n+\tvqadd.u64\td16, d8, d16\n+\tmovs\tr4, r1\n \tmovs\tr1, r6\n-\tlsrs\tr0, r6, #15\n+\tlsrs\tr4, r7, #15\n \tmovs\tr1, r6\n-\tvmvn.i32\td0, #160\t@ 0x000000a0\n-\tlsrs\tr2, r1, #18\n+\tvshr.u8\td0, d16, #2\n+\tlsrs\tr6, r2, #18\n \tmovs\tr1, r6\n HashStatistics >::prepareStreamFinalise(unsigned int, unsigned int):\n ./src/mira/hashstats.C:522\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr6, [pc, #956]\t@ (e14c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d32c>)\n \tvpush\t{d8-d9}\n@@ -425174,39 +425174,39 @@\n \teors\tr1, r3\n \tmovs\tr1, r0\n \tmovs\tr0, r0\n \tbkpt\t0x0050\n \tmovs\tr4, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr6, r0, #15\n+\tlsrs\tr2, r2, #15\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xf3760031\n-\tadd\tr6, pc, #384\t@ (adr r6, e1658 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d4c0>)\n+\t\t\t@ instruction: 0xf37e0031\n+\tadd\tr6, pc, #416\t@ (adr r6, e1678 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d4e0>)\n \tmovs\tr2, r6\n-\tble.n\te14a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d30c>\n+\tble.n\te14bc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d324>\n \tmovs\tr0, r6\n-\tble.n\te155c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d3c4>\n+\tble.n\te1574 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d3dc>\n \tmovs\tr0, r6\n-\t\t\t@ instruction: 0xf1ec0031\n-\tadd\tr4, pc, #872\t@ (adr r4, e1850 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d6b8>)\n+\t\t\t@ instruction: 0xf1f40031\n+\tadd\tr4, pc, #904\t@ (adr r4, e1870 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d6d8>)\n \tmovs\tr2, r6\n-\tbgt.n\te15ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d414>\n+\tbgt.n\te15c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d42c>\n \tmovs\tr0, r6\n-\tbgt.n\te1510 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d378>\n+\tbgt.n\te1528 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d390>\n \tmovs\tr0, r6\n-\tstrh\tr2, [r7, #16]\n+\tstrh\tr6, [r0, #18]\n \tmovs\tr0, r6\n-\tlsrs\tr6, r0, #6\n+\tlsrs\tr2, r2, #6\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsrs\tr0, r3, #2\n+\tlsrs\tr4, r4, #2\n \tmovs\tr1, r6\n-\tstrb\tr6, [r5, #5]\n+\tstrb\tr6, [r6, #5]\n \tmovs\tr1, r6\n HashStatistics >::computeHashStatistics(ReadPool&, int, bool, bool, bool, unsigned int, unsigned int, unsigned int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/hashstats.C:350\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r3\n \tldr\tr5, [pc, #520]\t@ (e1714 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d57c>)\n ./src/mira/hashstats.C:354\n@@ -425478,15 +425478,15 @@\n \tmovs\tr4, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \trev\tr2, r2\n \tmovs\tr4, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr6, r4, #31\n+\tlsls\tr2, r6, #31\n \tmovs\tr1, r6\n \tcbnz\tr4, e1762 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d5ca>\n \tmovs\tr4, r7\n \tcbnz\tr2, e175e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3d5c6>\n \tmovs\tr4, r7\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -425494,15 +425494,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr4, r4, #10\n+\tlsls\tr0, r6, #10\n \tmovs\tr1, r6\n \tasrs\tr4, r4, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -426119,21 +426119,21 @@\n \tmovs\tr4, r7\n \t\t\t@ instruction: 0xb7e0\n \tmovs\tr4, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tlsls\tr6, r7, #20\n+\tlsls\tr2, r1, #21\n \tmovs\tr1, r6\n-\tlsls\tr4, r3, #20\n+\tlsls\tr0, r5, #20\n \tmovs\tr1, r6\n-\tlsls\tr0, r6, #19\n+\tlsls\tr4, r7, #19\n \tmovs\tr1, r6\n-\tstrb\tr2, [r1, #5]\n+\tstrb\tr2, [r2, #5]\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n ./src/mira/hashstats.C:458\n \tmov\tr0, r5\n@@ -426595,29 +426595,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #816]\t@ (e2290 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e0f8>)\n+\tldr\tr6, [pc, #864]\t@ (e22c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e128>)\n \tmovs\tr0, r6\n-\tldr\tr6, [pc, #808]\t@ (e228c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e0f4>)\n+\tldr\tr6, [pc, #856]\t@ (e22bc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e124>)\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrb\tr2, [r0, #27]\n+\tstrb\tr6, [r1, #27]\n \tmovs\tr0, r6\n-\tstrb\tr6, [r6, #26]\n+\tstrb\tr2, [r0, #27]\n \tmovs\tr0, r6\n-\tldr\tr6, [sp, #528]\t@ 0x210\n+\tldr\tr6, [sp, #560]\t@ 0x230\n \tmovs\tr2, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr5, [sp, #88]\t@ 0x58\n@@ -427210,29 +427210,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #640]\t@ (e2670 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e4d8>)\n+\tldr\tr2, [pc, #688]\t@ (e26a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e508>)\n \tmovs\tr0, r6\n-\tldr\tr2, [pc, #632]\t@ (e266c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e4d4>)\n+\tldr\tr2, [pc, #680]\t@ (e269c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e504>)\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrb\tr0, [r3, #10]\n+\tstrb\tr4, [r4, #10]\n \tmovs\tr0, r6\n-\tstrb\tr4, [r1, #10]\n+\tstrb\tr0, [r3, #10]\n \tmovs\tr0, r6\n-\tldr\tr2, [sp, #360]\t@ 0x168\n+\tldr\tr2, [sp, #392]\t@ 0x188\n \tmovs\tr2, r6\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, r6\n@@ -427697,28 +427697,28 @@\n \tb.n\te25ce , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e436>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\te2624 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e48c>\n \tb.n\te262e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e496>\n \tb.n\te2634 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e49c>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrsb.w\tr0, [r2, r0, lsl #3]\n-\tldrsh.w\tr0, [r0, r0, lsl #3]\n+\tldrsb.w\tr0, [lr, r0, lsl #3]\n+\tldrsh.w\tr0, [ip, r0, lsl #3]\n \tlsrs\tr0, r5, #17\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr4, [r3, #92]\t@ 0x5c\n+\tstr\tr0, [r5, #92]\t@ 0x5c\n \tmovs\tr0, r6\n-\tstr\tr4, [r2, #92]\t@ 0x5c\n+\tstr\tr0, [r4, #92]\t@ 0x5c\n \tmovs\tr0, r6\n-\tstrh.w\tr0, [ip, r0, lsl #3]\n-\tmov\tr2, sp\n+\tldrh.w\tr0, [r8, r0, lsl #3]\n+\tmov\tr6, lr\n \tmovs\tr0, r6\n HashStatistics >::priv_sortMaskUp(std::vector >::hashstat_t, std::allocator >::hashstat_t> >&, unsigned char*):\n ./src/mira/hashstats.C:270\n \tpush\t{r4, lr}\n \tldr.w\tip, [pc, #40]\t@ e27a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e608>\n \tsub\tsp, #8\n \tadd\tip, pc\n@@ -427739,15 +427739,15 @@\n \tadd\tsp, #8\n \tpop\t{r4, pc}\n \tnop\n \tadd\tr7, pc, #912\t@ (adr r7, e2b34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3e99c>)\n \tmovs\tr4, r7\n \tlsrs\tr0, r4, #20\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf67c0030\n+\t\t\t@ instruction: 0xf6880030\n HashStatistics >::calcKMerForks(unsigned int, bool):\n ./src/mira/hashstats.C:2001\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r0\n \tldr.w\tr0, [pc, #1408]\t@ e2d34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3eb9c>\n \tldr.w\tr3, [pc, #1408]\t@ e2d38 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3eba0>\n \tsub\tsp, #140\t@ 0x8c\n@@ -428350,17 +428350,17 @@\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr7, pc, #608\t@ (adr r7, e2fa0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ee08>)\n \tmovs\tr4, r7\n \tlsls\tr4, r2, #28\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf4d2003c\n-\t\t\t@ instruction: 0xf3a20030\n+\t\t\t@ instruction: 0xf3ae0030\n \t\t\t@ instruction: 0xf39c003c\n-\t\t\t@ instruction: 0xf2720030\n+\t\t\t@ instruction: 0xf27e0030\n \tadd\tr3, pc, #464\t@ (adr r3, e2f28 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ed90>)\n \tmovs\tr4, r7\n \tadd\tr2, pc, #304\t@ (adr r2, e2e8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3ecf4>)\n \tmovs\tr4, r7\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n HashStatistics >::assignReadBaseStatistics_MultiThread(ReadPool&, unsigned int, bool, unsigned int, bool):\n@@ -429202,35 +429202,35 @@\n \tmovs\tr0, r0\n \tlsls\tr0, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #16\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #28\n \tmovs\tr0, r0\n-\tbmi.n\te34a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f310>\n+\tbmi.n\te34b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f320>\n \tmovs\tr1, r6\n-\tstrh\tr2, [r2, #58]\t@ 0x3a\n+\tstrh\tr2, [r3, #58]\t@ 0x3a\n \tmovs\tr2, r6\n-\tbkpt\t0x00d2\n+\tbkpt\t0x00de\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tbvc.n\te33f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f25c>\n+\tbvc.n\te340c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f274>\n \tmovs\tr0, r6\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tbvs.n\te331c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f184>\n+\tbvs.n\te3334 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f19c>\n \tmovs\tr0, r6\n-\tbmi.n\te34b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f31c>\n+\tbmi.n\te34cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f334>\n \tmovs\tr0, r6\n-\tbmi.n\te3334 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f19c>\n+\tbmi.n\te334c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f1b4>\n \tmovs\tr0, r6\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s23\n \tmovs\tr2, #2\n \tmov\tr0, sl\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n /usr/include/c++/10/ostream:185\n@@ -429917,132 +429917,132 @@\n \tldr\tr7, [sp, #12]\n \tldr\tr0, [r7, #4]\n \tcmp\tr0, #0\n \tbeq.n\te384e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f6b6>\n \tbl\t997cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65a94>\n \tb.n\te384e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f6b6>\n \tnop\n-\tcbnz\tr6, e39aa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f812>\n+\tcbnz\tr2, e39ae , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f816>\n \tmovs\tr0, r6\n \tldr\tr2, [sp, #624]\t@ 0x270\n \tmovs\tr4, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr7, {r1, r2, r3, r4, r5, r7}\n+\tldmia\tr7, {r1, r2, r6, r7}\n \tmovs\tr1, r6\n-\tstrh\tr2, [r5, #20]\n+\tstrh\tr2, [r6, #20]\n \tmovs\tr2, r6\n-\trev\tr0, r6\n+\trev\tr4, r7\n \tmovs\tr0, r6\n-\tcbnz\tr6, e39a2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f80a>\n+\tcbnz\tr2, e39a6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f80e>\n \tmovs\tr0, r6\n-\tldrsh\tr0, [r0, r1]\n+\tldrsh\tr4, [r1, r1]\n \tmovs\tr0, r6\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe81e0030\n+\t\t\t@ instruction: 0xe82a0030\n \tlsrs\tr0, r2, #16\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr0, [r7, r6]\n+\tldrb\tr4, [r0, r7]\n \tmovs\tr0, r6\n-\tbmi.n\te3950 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7b8>\n+\tbmi.n\te3968 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7d0>\n \tmovs\tr0, r6\n-\tbpl.n\te3a00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f868>\n+\tbpl.n\te3a18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f880>\n \tmovs\tr0, r6\n-\tbmi.n\te39e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f848>\n+\tbmi.n\te39f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f860>\n \tmovs\tr0, r6\n-\tbne.n\te3900 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f768>\n+\tbne.n\te3918 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f780>\n \tmovs\tr0, r6\n-\tldrb\tr4, [r5, r5]\n+\tldrb\tr0, [r7, r5]\n \tmovs\tr0, r6\n-\tbpl.n\te3994 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7fc>\n+\tbvs.n\te39ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f814>\n \tmovs\tr0, r6\n-\tbpl.n\te3a5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8c4>\n+\tbpl.n\te3a74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8dc>\n \tmovs\tr0, r6\n-\tbvs.n\te39f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f85c>\n+\tbvs.n\te3a0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f874>\n \tmovs\tr0, r6\n-\tb.n\te3930 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f798>\n+\tb.n\te3948 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7b0>\n \tmovs\tr0, r6\n-\tbcs.n\te3984 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7ec>\n+\tbcs.n\te399c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f804>\n \tmovs\tr0, r6\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tbcc.n\te3918 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f780>\n+\tbcc.n\te3930 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f798>\n \tmovs\tr0, r6\n-\tbcc.n\te3990 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7f8>\n+\tbcc.n\te39a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f810>\n \tmovs\tr0, r6\n-\tbmi.n\te39f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f860>\n+\tbmi.n\te3a10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f878>\n \tmovs\tr0, r6\n-\teors\tr6, r5\n+\teors\tr2, r7\n \tmovs\tr0, r6\n-\tlsls\tr4, r0\n+\tlsls\tr0, r2\n \tmovs\tr0, r6\n-\tlsls\tr6, r5\n+\tlsls\tr2, r7\n \tmovs\tr0, r6\n-\tldmia\tr7, {r4, r5, r7}\n+\tldmia\tr7, {r2, r3, r4, r5, r7}\n \tmovs\tr0, r6\n-\tldmia\tr7, {r1, r5, r6, r7}\n+\tldmia\tr7, {r1, r2, r3, r5, r6, r7}\n \tmovs\tr0, r6\n-\tbeq.n\te3a80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8e8>\n+\tbeq.n\te3a98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f900>\n \tmovs\tr0, r6\n-\tldmia\tr7, {r1, r2, r3, r4, r7}\n+\tldmia\tr7, {r1, r3, r5, r7}\n \tmovs\tr0, r6\n-\tldmia\tr7, {r4, r6, r7}\n+\tldmia\tr7, {r2, r3, r4, r6, r7}\n \tmovs\tr0, r6\n-\tbeq.n\te3a08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f870>\n+\tbeq.n\te3a20 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f888>\n \tmovs\tr0, r6\n-\tbcc.n\te3ab0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f918>\n+\tbcc.n\te3ac8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f930>\n \tmovs\tr0, r6\n-\tbcc.n\te3928 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f790>\n+\tbcc.n\te3940 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7a8>\n \tmovs\tr0, r6\n-\tbcc.n\te39c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f830>\n+\tbcc.n\te39e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f848>\n \tmovs\tr0, r6\n-\tbmi.n\te3af8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f960>\n+\tbmi.n\te3910 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f778>\n \tmovs\tr0, r6\n-\tbmi.n\te3958 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7c0>\n+\tbmi.n\te3970 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7d8>\n \tmovs\tr0, r6\n-\tbmi.n\te39d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f838>\n+\tbmi.n\te39e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f850>\n \tmovs\tr0, r6\n-\tldmia\tr7!, {r3, r5}\n+\tldmia\tr7!, {r2, r4, r5}\n \tmovs\tr0, r6\n-\tands\tr2, r5\n+\tands\tr6, r6\n \tmovs\tr0, r6\n-\tldmia\tr7!, {r6}\n+\tldmia\tr7!, {r2, r3, r6}\n \tmovs\tr0, r6\n-\tbmi.n\te39e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f850>\n+\tbmi.n\te3a00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f868>\n \tmovs\tr0, r6\n-\tbmi.n\te3a48 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8b0>\n+\tbmi.n\te3a60 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8c8>\n \tmovs\tr0, r6\n-\tbkpt\t0x00c2\n+\tbkpt\t0x00ce\n \tmovs\tr0, r6\n-\tbeq.n\te3a00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f868>\n+\tbeq.n\te3a18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f880>\n \tmovs\tr0, r6\n-\tbne.n\te3a70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8d8>\n+\tbne.n\te3a88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8f0>\n \tmovs\tr0, r6\n-\tbne.n\te3ae0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f948>\n+\tbne.n\te3af8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f960>\n \tmovs\tr0, r6\n-\tbcc.n\te3a38 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8a0>\n+\tbcc.n\te3a50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8b8>\n \tmovs\tr0, r6\n-\tbcc.n\te3ab0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f918>\n+\tbcc.n\te3ac8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f930>\n \tmovs\tr0, r6\n-\tbcc.n\te3b30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f998>\n+\tbcc.n\te3948 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f7b0>\n \tmovs\tr0, r6\n-\tbeq.n\te39d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f838>\n+\tbeq.n\te39e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f850>\n \tmovs\tr0, r6\n-\tbne.n\te3a40 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8a8>\n+\tbne.n\te3a58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f8c0>\n \tmovs\tr0, r6\n-\tbne.n\te3b00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f968>\n+\tbne.n\te3b18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f980>\n \tmovs\tr0, r6\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n void std::vector::hashstat_t, int>, std::allocator::hashstat_t, int> > >::_M_realloc_insert::hashstat_t, int> >(__gnu_cxx::__normal_iterator::hashstat_t, int>*, std::vector::hashstat_t, int>, std::allocator::hashstat_t, int> > > >, std::pair::hashstat_t, int>&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n@@ -430342,15 +430342,15 @@\n \tstmia.w\tr4, {r0, r1}\n \tb.n\te3ae4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3f94c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (e3d48 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3fbb0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr6, #228\t@ 0xe4\n+\tcmp\tr6, #240\t@ 0xf0\n \tmovs\tr0, r6\n void std::__push_heap<__gnu_cxx::__normal_iterator::hashstat_t, int>*, std::vector::hashstat_t, int>, std::allocator::hashstat_t, int> > > >, int, std::pair::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse::hashstat_t, int, bool (*)(HashStatistics::hashstat_t const&, HashStatistics::hashstat_t const&)> > >(__gnu_cxx::__normal_iterator::hashstat_t, int>*, std::vector::hashstat_t, int>, std::allocator::hashstat_t, int> > > >, int, int, std::pair::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse::hashstat_t, int, bool (*)(HashStatistics::hashstat_t const&, HashStatistics::hashstat_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tsubs\tr5, r1, #1\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -430962,15 +430962,15 @@\n \tstmia.w\tr4, {r0, r1, r2, r3}\n \tb.n\te4032 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x3fe9a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (e4254 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x400bc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr1, #216\t@ 0xd8\n+\tcmp\tr1, #228\t@ 0xe4\n \tmovs\tr0, r6\n void std::__push_heap<__gnu_cxx::__normal_iterator >::hashstat_t, int>*, std::vector >::hashstat_t, int>, std::allocator >::hashstat_t, int> > > >, int, std::pair >::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::hashstat_t, int, bool (*)(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&)> > >(__gnu_cxx::__normal_iterator >::hashstat_t, int>*, std::vector >::hashstat_t, int>, std::allocator >::hashstat_t, int> > > >, int, int, std::pair >::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::hashstat_t, int, bool (*)(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tsubs\tr5, r1, #1\n /usr/include/c++/10/bits/stl_iterator.h:1042\n@@ -431469,15 +431469,15 @@\n \tmovw\tr7, #65504\t@ 0xffe0\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\te45a6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x4040e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (e4644 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x404ac>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tmovs\tr5, #230\t@ 0xe6\n+\tmovs\tr5, #242\t@ 0xf2\n \tmovs\tr0, r6\n void std::__push_heap<__gnu_cxx::__normal_iterator >::hashstat_t, int>*, std::vector >::hashstat_t, int>, std::allocator >::hashstat_t, int> > > >, int, std::pair >::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::hashstat_t, int, bool (*)(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&)> > >(__gnu_cxx::__normal_iterator >::hashstat_t, int>*, std::vector >::hashstat_t, int>, std::allocator >::hashstat_t, int> > > >, int, int, std::pair >::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::hashstat_t, int, bool (*)(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1042\n \tmov.w\tsl, #48\t@ 0x30\n /usr/include/c++/10/bits/stl_heap.h:138\n@@ -432034,15 +432034,15 @@\n \tadd.w\tr5, fp, #160\t@ 0xa0\n \tblx\tb678 \n \tb.n\te48f2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x4075a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (e4a98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x40900>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tmovs\tr1, #146\t@ 0x92\n+\tmovs\tr1, #158\t@ 0x9e\n \tmovs\tr0, r6\n void std::__push_heap<__gnu_cxx::__normal_iterator >::hashstat_t, int>*, std::vector >::hashstat_t, int>, std::allocator >::hashstat_t, int> > > >, int, std::pair >::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::hashstat_t, int, bool (*)(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&)> > >(__gnu_cxx::__normal_iterator >::hashstat_t, int>*, std::vector >::hashstat_t, int>, std::allocator >::hashstat_t, int> > > >, int, int, std::pair >::hashstat_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::hashstat_t, int, bool (*)(HashStatistics >::hashstat_t const&, HashStatistics >::hashstat_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1042\n \tmov.w\tsl, #80\t@ 0x50\n /usr/include/c++/10/bits/stl_heap.h:138\n@@ -518949,35 +518949,35 @@\n \tadd\tsp, #8\n \tpop\t{r4, r5, r6, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tbcc.n\t10fcb0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6bb18>\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr4, #182\t@ 0xb6\n+\tcmp\tr4, #190\t@ 0xbe\n \tmovs\tr6, r5\n-\tcmp\tr4, #92\t@ 0x5c\n+\tcmp\tr4, #100\t@ 0x64\n \tmovs\tr6, r5\n-\tcmp\tr4, #80\t@ 0x50\n+\tcmp\tr4, #88\t@ 0x58\n \tmovs\tr6, r5\n-\tcmp\tr4, #64\t@ 0x40\n+\tcmp\tr4, #72\t@ 0x48\n \tmovs\tr6, r5\n-\tcmp\tr4, #52\t@ 0x34\n+\tcmp\tr4, #60\t@ 0x3c\n \tmovs\tr6, r5\n-\tcmp\tr4, #36\t@ 0x24\n+\tcmp\tr4, #44\t@ 0x2c\n \tmovs\tr6, r5\n-\tcmp\tr4, #20\n+\tcmp\tr4, #28\n \tmovs\tr6, r5\n-\tcmp\tr4, #4\n+\tcmp\tr4, #12\n \tmovs\tr6, r5\n-\tcmp\tr3, #244\t@ 0xf4\n+\tcmp\tr3, #252\t@ 0xfc\n \tmovs\tr6, r5\n-\tcmp\tr3, #228\t@ 0xe4\n+\tcmp\tr3, #236\t@ 0xec\n \tmovs\tr6, r5\n-\tcmp\tr3, #204\t@ 0xcc\n+\tcmp\tr3, #212\t@ 0xd4\n \tmovs\tr6, r5\n \tbcs.n\t10fe10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6bc78>\n \tmovs\tr1, r7\n operator<<(std::ostream&, matchwithsorter_t const&) [clone .isra.0]:\n ./src/mira/../../src/mira/skim.H:75\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r1\n@@ -519172,31 +519172,31 @@\n \tpop\t{r4, r5, r6, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \tbcs.n\t10fec0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6bd28>\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr3, #70\t@ 0x46\n+\tcmp\tr3, #78\t@ 0x4e\n \tmovs\tr6, r5\n-\tcmp\tr2, #226\t@ 0xe2\n+\tcmp\tr2, #234\t@ 0xea\n \tmovs\tr6, r5\n-\tcmp\tr2, #214\t@ 0xd6\n+\tcmp\tr2, #222\t@ 0xde\n \tmovs\tr6, r5\n-\tcmp\tr2, #198\t@ 0xc6\n+\tcmp\tr2, #206\t@ 0xce\n \tmovs\tr6, r5\n-\tcmp\tr2, #110\t@ 0x6e\n+\tcmp\tr2, #118\t@ 0x76\n \tmovs\tr6, r5\n-\tcmp\tr2, #94\t@ 0x5e\n+\tcmp\tr2, #102\t@ 0x66\n \tmovs\tr6, r5\n-\tcmp\tr2, #134\t@ 0x86\n+\tcmp\tr2, #142\t@ 0x8e\n \tmovs\tr6, r5\n-\tcmp\tr2, #118\t@ 0x76\n+\tcmp\tr2, #126\t@ 0x7e\n \tmovs\tr6, r5\n-\tcmp\tr2, #102\t@ 0x66\n+\tcmp\tr2, #110\t@ 0x6e\n \tmovs\tr6, r5\n \tbeq.n\t10fe74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6bcdc>\n \tmovs\tr1, r7\n std::basic_ostream >& std::endl >(std::basic_ostream >&) [clone .isra.0]:\n /usr/include/c++/10/ostream:682\n \tldr\tr3, [r0, #0]\n /usr/include/c++/10/ostream:681\n@@ -520738,20 +520738,20 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tstmia\tr5!, {r2, r5, r7}\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfad2002e\n-\tadd\tr5, sp, #752\t@ 0x2f0\n+\t\t\t@ instruction: 0xfada002e\n+\tadd\tr5, sp, #784\t@ 0x310\n \tmovs\tr7, r5\n-\tb.n\t110540 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6c3a8>\n+\tb.n\t110558 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6c3c0>\n \tmovs\tr5, r5\n-\tb.n\t11049c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6c304>\n+\tb.n\t1104b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6c31c>\n \tmovs\tr5, r5\n operator<<(std::ostream&, ADSEstimator const&) [clone .isra.0]:\n ./src/mira/../../src/mira/ads.H:222\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r1\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #312]\t@ (110c00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6ca68>)\n@@ -520936,39 +520936,39 @@\n \tbeq.n\t110bd2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6ca3a>\n \tmov\tr0, r5\n \tblx\tr2\n \tmov\tr1, r0\n \tb.n\t110bd2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6ca3a>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n-\tsubs\tr6, r2, #0\n+\tsubs\tr6, r3, #0\n \tmovs\tr6, r5\n \tstmia\tr4!, {r1, r3, r7}\n \tmovs\tr1, r7\n-\tsubs\tr2, r1, #0\n+\tsubs\tr2, r2, #0\n \tmovs\tr6, r5\n-\tadds\tr6, r7, #7\n+\tsubs\tr6, r0, #0\n \tmovs\tr6, r5\n-\tadds\tr2, r6, #7\n+\tadds\tr2, r7, #7\n \tmovs\tr6, r5\n-\tadds\tr6, r4, #7\n+\tadds\tr6, r5, #7\n \tmovs\tr6, r5\n-\tadds\tr2, r3, #7\n+\tadds\tr2, r4, #7\n \tmovs\tr6, r5\n-\tadds\tr6, r1, #7\n+\tadds\tr6, r2, #7\n \tmovs\tr6, r5\n-\tadds\tr2, r0, #7\n+\tadds\tr2, r1, #7\n \tmovs\tr6, r5\n-\tadds\tr6, r6, #6\n+\tadds\tr6, r7, #6\n \tmovs\tr6, r5\n-\tadds\tr2, r5, #6\n+\tadds\tr2, r6, #6\n \tmovs\tr6, r5\n-\tadds\tr6, r3, #6\n+\tadds\tr6, r4, #6\n \tmovs\tr6, r5\n-\tadds\tr0, r2, #6\n+\tadds\tr0, r3, #6\n \tmovs\tr6, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n skimhitforsave_t::stdSortCmp(skimhitforsave_t const&, skimhitforsave_t const&):\n ./src/mira/skim.C:68\n \tldr\tr2, [r0, #0]\n \tldr\tr3, [r1, #0]\n@@ -521101,17 +521101,17 @@\n \tmovs\tr0, r0\n \tstmia\tr2!, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr1, r7\n \tstmia\tr2!, {r6, r7}\n \tmovs\tr1, r7\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tlsls\tr4, r5, #11\n+\tlsls\tr0, r7, #11\n \tmovs\tr6, r5\n-\tstc2\t0, cr0, [lr, #-180]\t@ 0xffffff4c\n+\tldc2\t0, cr0, [sl, #-180]\t@ 0xffffff4c\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n boost::detail::interruption_checker::unlock_if_locked() [clone .part.0]:\n /usr/include/boost/thread/pthread/thread_data.hpp:223\n \tldr\tr2, [pc, #232]\t@ (110e14 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6cc7c>)\n \tldr\tr3, [pc, #236]\t@ (110e18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6cc80>)\n \tadd\tr2, pc\n@@ -521251,27 +521251,27 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr2!, {r3, r5}\n \tmovs\tr1, r7\n \tstmia\tr1!, {r3, r4, r6, r7}\n \tmovs\tr1, r7\n-\tldrd\tr0, r0, [sl], #-180\t@ 0xb4\n-\tstc2l\t0, cr0, [r8], {45}\t@ 0x2d\n-\tldmia.w\tr6!, {r0, r2, r3, r5}\n-\tstrd\tr0, r0, [r4], #-180\t@ 0xb4\n-\tldc2\t0, cr0, [r2], #180\t@ 0xb4\n-\tstmia.w\tr0!, {r0, r2, r3, r5}\n-\tldc2\t0, cr0, [r2], {45}\t@ 0x2d\n+\tstmia.w\tr6, {r0, r2, r3, r5}\n+\tldc2l\t0, cr0, [r4], {45}\t@ 0x2d\n+\t\t\t@ instruction: 0xe8c2002d\n+\tldrd\tr0, r0, [r0], #-180\t@ 0xb4\n+\tldc2\t0, cr0, [lr], #180\t@ 0xb4\n+\tstmia.w\tip!, {r0, r2, r3, r5}\n+\tldc2\t0, cr0, [lr], {45}\t@ 0x2d\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tstr.w\tr0, [r6, #45]\t@ 0x2d\n-\tldr\tr0, [r1, #28]\n+\tldr.w\tr0, [r2, #45]\t@ 0x2d\n+\tldr\tr4, [r2, #28]\n \tmovs\tr5, r5\n-\tldr.w\tr0, [lr, #45]\t@ 0x2d\n+\tstr??.w\tr0, [sl, #45]\t@ 0x2d\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n@@ -521530,17 +521530,17 @@\n \tmovs\tr0, r0\n \tstmia\tr0!, {r2, r3, r4}\n \tmovs\tr1, r7\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \titee\t\n \tmov\tr1, r7\n-\tldrbal\tr6, [r2, r1]\n+\tldrbal\tr2, [r4, r1]\n \tmoval\tr5, r5\n-\tldrb\tr4, [r2, r1]\n+\tldrb\tr0, [r4, r1]\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -522066,36 +522066,36 @@\n \t...\n \tbkpt\t0x0048\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbkpt\t0x0024\n \tmovs\tr1, r7\n-\t\t\t@ instruction: 0xf4c4002d\n-\tstr\tr6, [r0, #92]\t@ 0x5c\n+\t\t\t@ instruction: 0xf4d0002d\n+\tstr\tr2, [r2, #92]\t@ 0x5c\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xf4dc002d\n-\tstc2\t0, cr0, [sl, #180]\t@ 0xb4\n-\tb.n\t111b50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d9b8>\n+\t\t\t@ instruction: 0xf4e8002d\n+\tldc2\t0, cr0, [r6, #180]\t@ 0xb4\n+\tb.n\t111b68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d9d0>\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xf7c2002d\n-\tb.n\t111bd0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6da38>\n+\t\t\t@ instruction: 0xf7ce002d\n+\tb.n\t111be8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6da50>\n \tmovs\tr5, r5\n \tcbnz\tr6, 1114e2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d34a>\n \tmovs\tr1, r7\n-\t\t\t@ instruction: 0xf616002d\n+\t\t\t@ instruction: 0xf622002d\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf5f8002d\n-\tb.n\t1118b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d720>\n+\taddw\tr0, r4, #2093\t@ 0x82d\n+\tb.n\t1118d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d738>\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xf668002d\n-\tb.n\t111938 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d7a0>\n+\t\t\t@ instruction: 0xf674002d\n+\tb.n\t111950 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d7b8>\n \tmovs\tr5, r5\n-\trsb\tr0, r8, #11337728\t@ 0xad0000\n+\trsbs\tr0, r4, #11337728\t@ 0xad0000\n /usr/include/boost/thread/pthread/condition_variable.hpp:149\n \tldr\tr3, [pc, #424]\t@ (11163c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d4a4>)\n \tmovs\tr2, #149\t@ 0x95\n \tldr\tr1, [pc, #424]\t@ (111640 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d4a8>)\n \tldr\tr0, [pc, #428]\t@ (111644 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d4ac>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n@@ -522317,42 +522317,42 @@\n \tadds\tr5, #8\n \tstr\tr5, [sp, #40]\t@ 0x28\n \tbl\t28c58 \n \tb.n\t11159c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d404>\n /usr/include/boost/thread/pthread/thread_data.hpp:225\n \tmovs\tr4, #0\n \tb.n\t11159c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d404>\n-\t\t\t@ instruction: 0xf768002d\n-\t\t\t@ instruction: 0xf796002d\n-\t\t\t@ instruction: 0xf7d0002d\n-\t\t\t@ instruction: 0xf6be002d\n-\t\t\t@ instruction: 0xf714002d\n-\taddw\tr0, r2, #2093\t@ 0x82d\n-\t\t\t@ instruction: 0xfaf0002d\n+\t\t\t@ instruction: 0xf774002d\n+\t\t\t@ instruction: 0xf7a2002d\n+\t\t\t@ instruction: 0xf7dc002d\n+\tmovt\tr0, #43053\t@ 0xa82d\n+\t\t\t@ instruction: 0xf720002d\n+\taddw\tr0, lr, #2093\t@ 0x82d\n+\t\t\t@ instruction: 0xfafc002d\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf5f6002d\n-\t\t\t@ instruction: 0xf630002d\n-\t\t\t@ instruction: 0xf662002d\n-\t\t\t@ instruction: 0xf7a4002d\n-\t\t\t@ instruction: 0xf6d2002d\n-\tb.n\t11196c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d7d4>\n+\taddw\tr0, r2, #2093\t@ 0x82d\n+\t\t\t@ instruction: 0xf63c002d\n+\t\t\t@ instruction: 0xf66e002d\n+\t\t\t@ instruction: 0xf7b0002d\n+\t\t\t@ instruction: 0xf6de002d\n+\tb.n\t111984 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6d7ec>\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xf7ce002d\n-\t\t\t@ instruction: 0xf730002d\n-\t\t\t@ instruction: 0xf7fa002d\n-\tsubs.w\tr0, ip, #11337728\t@ 0xad0000\n-\t\t\t@ instruction: 0xf5f6002d\n-\tmovw\tr0, #18477\t@ 0x482d\n-\tsub.w\tr0, sl, #11337728\t@ 0xad0000\n-\t\t\t@ instruction: 0xf5e4002d\n-\t\t\t@ instruction: 0xf622002d\n-\t\t\t@ instruction: 0xfa94002d\n-\t\t\t@ instruction: 0xfaa2002d\n-\t\t\t@ instruction: 0xfa38002d\n+\t\t\t@ instruction: 0xf7da002d\n+\t\t\t@ instruction: 0xf73c002d\n+\tstrb.w\tr0, [r6, sp, lsl #2]\n+\trsb\tr0, r8, #11337728\t@ 0xad0000\n+\taddw\tr0, r2, #2093\t@ 0x82d\n+\t\t\t@ instruction: 0xf650002d\n+\tsubs.w\tr0, r6, #11337728\t@ 0xad0000\n+\t\t\t@ instruction: 0xf5f0002d\n+\t\t\t@ instruction: 0xf62e002d\n+\t\t\t@ instruction: 0xfaa0002d\n+\t\t\t@ instruction: 0xfaae002d\n+\t\t\t@ instruction: 0xfa44002d\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n std::vector >, std::allocator > > >::resize(unsigned int) [clone .constprop.0]:\n /usr/include/c++/10/bits/stl_vector.h:937\n \tpush\t{r3, r4, r5, r6, r7, lr}\n@@ -527212,23 +527212,23 @@\n \tmovs\tr2, #184\t@ 0xb8\n \tldr\tr1, [pc, #28]\t@ (113cb0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6fb18>)\n \tldr\tr0, [pc, #28]\t@ (113cb4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6fb1c>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\t\t\t@ instruction: 0xf0ac002d\n-\tldmia\tr7, {r1, r3, r5, r7}\n+\t\t\t@ instruction: 0xf0b4002d\n+\tldmia\tr7, {r1, r2, r4, r5, r7}\n \tmovs\tr5, r5\n-\tldmia\tr2!, {r3, r5, r6, r7}\n+\tldmia\tr2, {r2, r4, r5, r6, r7}\n \tmovs\tr5, r5\n-\teors.w\tr0, sl, #45\t@ 0x2d\n-\tldmia\tr7, {r3, r4, r7}\n+\t\t\t@ instruction: 0xf0a2002d\n+\tldmia\tr7, {r2, r5, r7}\n \tmovs\tr5, r5\n-\tldmia\tr3!, {r1, r2}\n+\tldmia\tr3!, {r1, r4}\n \tmovs\tr5, r5\n Skim::sortMWByPercent_(matchwithsorter_t const&, matchwithsorter_t const&):\n ./src/mira/../../src/mira/skim.H:606\n \tldr\tr2, [r0, #8]\n \tldr\tr3, [r1, #8]\n \tcmp\tr2, r3\n \tbeq.n\t113cc8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x6fb30>\n@@ -528171,19 +528171,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tadds\tr4, #224\t@ 0xe0\n+\tadds\tr4, #236\t@ 0xec\n \tmovs\tr5, r5\n-\tadds\tr4, #246\t@ 0xf6\n+\tadds\tr5, #2\n \tmovs\tr5, r5\n-\tadds\tr5, #32\n+\tadds\tr5, #44\t@ 0x2c\n \tmovs\tr5, r5\n Skim::discard():\n ./src/mira/skim.C:154\n \tbx\tlr\n \tnop\n Skim::setExtendedLog(bool):\n ./src/mira/../../src/mira/skim.H:710\n@@ -529140,19 +529140,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tcmp\tr6, #112\t@ 0x70\n+\tcmp\tr6, #124\t@ 0x7c\n \tmovs\tr5, r5\n-\tcmp\tr6, #134\t@ 0x86\n+\tcmp\tr6, #146\t@ 0x92\n \tmovs\tr5, r5\n-\tcmp\tr6, #176\t@ 0xb0\n+\tcmp\tr6, #188\t@ 0xbc\n \tmovs\tr5, r5\n Skim >::discard():\n ./src/mira/skim.C:154\n \tbx\tlr\n \tnop\n Skim >::setExtendedLog(bool):\n ./src/mira/../../src/mira/skim.H:710\n@@ -530118,19 +530118,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tmovs\tr7, #244\t@ 0xf4\n+\tcmp\tr0, #0\n \tmovs\tr5, r5\n-\tcmp\tr0, #10\n+\tcmp\tr0, #22\n \tmovs\tr5, r5\n-\tcmp\tr0, #52\t@ 0x34\n+\tcmp\tr0, #64\t@ 0x40\n \tmovs\tr5, r5\n Skim >::discard():\n ./src/mira/skim.C:154\n \tbx\tlr\n \tnop\n Skim >::setExtendedLog(bool):\n ./src/mira/../../src/mira/skim.H:710\n@@ -531089,19 +531089,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tmovs\tr1, #132\t@ 0x84\n+\tmovs\tr1, #144\t@ 0x90\n \tmovs\tr5, r5\n-\tmovs\tr1, #154\t@ 0x9a\n+\tmovs\tr1, #166\t@ 0xa6\n \tmovs\tr5, r5\n-\tmovs\tr1, #196\t@ 0xc4\n+\tmovs\tr1, #208\t@ 0xd0\n \tmovs\tr5, r5\n Skim >::discard():\n ./src/mira/skim.C:154\n \tbx\tlr\n \tnop\n Skim >::setExtendedLog(bool):\n ./src/mira/../../src/mira/skim.H:710\n@@ -531191,15 +531191,15 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r7, #2]\n \tmovs\tr1, r7\n \tldrb\tr2, [r5, #2]\n \tmovs\tr1, r7\n-\tsubs\tr5, #80\t@ 0x50\n+\tsubs\tr5, #92\t@ 0x5c\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n boost::condition_variable_any::condition_variable_any():\n /usr/include/boost/thread/pthread/condition_variable.hpp:167\n@@ -531346,39 +531346,39 @@\n \tb.n\t115810 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x71678>\n \tldrb\tr2, [r7, #0]\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r5, #0]\n \tmovs\tr1, r7\n-\tbvs.n\t1158f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7175c>\n+\tbvs.n\t115904 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7176c>\n \tmovs\tr5, r5\n-\tpush\t{r1, r3, r6, r7}\n+\tpush\t{r1, r2, r4, r6, r7}\n \tmovs\tr5, r5\n-\tadd\tsp, #32\n+\tadd\tsp, #80\t@ 0x50\n \tmovs\tr5, r5\n \tstrb\tr0, [r1, #31]\n \tmovs\tr1, r7\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tbvs.n\t1158d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7173c>\n+\tbvs.n\t1158e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7174c>\n \tmovs\tr5, r5\n-\tbpl.n\t115780 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x715e8>\n+\tbpl.n\t115790 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x715f8>\n \tmovs\tr5, r5\n-\tsub\tsp, #240\t@ 0xf0\n+\tsub\tsp, #288\t@ 0x120\n \tmovs\tr5, r5\n-\tsub\tsp, #456\t@ 0x1c8\n+\tsub\tsp, #504\t@ 0x1f8\n \tmovs\tr5, r5\n-\tcbz\tr0, 115862 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x716ca>\n+\tcbz\tr4, 115864 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x716cc>\n \tmovs\tr5, r5\n-\tsub\tsp, #168\t@ 0xa8\n+\tsub\tsp, #216\t@ 0xd8\n \tmovs\tr5, r5\n-\tsub\tsp, #384\t@ 0x180\n+\tsub\tsp, #432\t@ 0x1b0\n \tmovs\tr5, r5\n-\tcbz\tr6, 115872 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x716da>\n+\tcbz\tr2, 115876 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x716de>\n \tmovs\tr5, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim::chimeraHuntStoreOverlapCoverage(signed char, unsigned int, unsigned int, unsigned short, unsigned short, unsigned short, unsigned short):\n ./src/mira/skim.C:2951\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n ./src/mira/skim.C:2993\n@@ -533144,29 +533144,29 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r5, #68]\t@ 0x44\n \tmovs\tr1, r7\n \tldr\tr2, [r1, #64]\t@ 0x40\n \tmovs\tr1, r7\n-\tldmia\tr1!, {r2, r4, r5, r7}\n+\tldmia\tr1!, {r2, r3, r4, r5, r7}\n \tmovs\tr5, r5\n-\tldmia\tr1!, {r2, r4, r5, r7}\n+\tldmia\tr1!, {r2, r3, r4, r5, r7}\n \tmovs\tr5, r5\n-\tstmia\tr4!, {r3, r5}\n+\tstmia\tr4!, {r4, r5}\n \tmovs\tr5, r5\n-\tmovs\tr1, #36\t@ 0x24\n+\tmovs\tr1, #44\t@ 0x2c\n \tmovs\tr6, r5\n \tlsrs\tr4, r7, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr1!, {r2, r5}\n+\tldmia\tr1!, {r2, r3, r5}\n \tmovs\tr5, r5\n Skim >::getOverlapCriterionLevel(unsigned int, unsigned char, ADSEstimator const&, unsigned char, unsigned char&, unsigned char&):\n ./src/mira/skim.C:2266\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tldr\tr2, [pc, #768]\t@ (116918 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x72780>)\n \tmov\tr7, r3\n@@ -533574,29 +533574,29 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r6, #16]\n \tmovs\tr1, r7\n \tldr\tr2, [r2, #12]\n \tmovs\tr1, r7\n-\tstmia\tr6!, {r2, r3, r4, r5, r6}\n+\tstmia\tr6!, {r2, r7}\n \tmovs\tr5, r5\n-\tstmia\tr6!, {r2, r3, r4, r5, r6}\n+\tstmia\tr6!, {r2, r7}\n \tmovs\tr5, r5\n-\tstmia\tr0!, {r4, r5, r6, r7}\n+\tstmia\tr0!, {r3, r4, r5, r6, r7}\n \tmovs\tr5, r5\n-\tadds\tr4, r5, #7\n+\tadds\tr4, r6, #7\n \tmovs\tr6, r5\n \tlsls\tr0, r0, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r2, r3, r5, r6, r7}\n+\tstmia\tr5!, {r2, r4, r5, r6, r7}\n \tmovs\tr5, r5\n Skim >::getOverlapCriterionLevel(unsigned int, unsigned char, ADSEstimator const&, unsigned char, unsigned char&, unsigned char&):\n ./src/mira/skim.C:2266\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tldr\tr2, [pc, #768]\t@ (116c50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x72ab8>)\n \tmov\tr7, r3\n@@ -534004,29 +534004,29 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr2, [r7, #92]\t@ 0x5c\n \tmovs\tr1, r7\n \tstr\tr2, [r3, #88]\t@ 0x58\n \tmovs\tr1, r7\n-\tstmia\tr3!, {r2, r6}\n+\tstmia\tr3!, {r2, r3, r6}\n \tmovs\tr5, r5\n-\tstmia\tr3!, {r2, r6}\n+\tstmia\tr3!, {r2, r3, r6}\n \tmovs\tr5, r5\n-\tpop\t{r3, r4, r5, r7, pc}\n+\tpop\t{r6, r7, pc}\n \tmovs\tr5, r5\n-\tsubs\tr4, r6, r2\n+\tsubs\tr4, r7, r2\n \tmovs\tr6, r5\n \tlsrs\tr4, r4, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr2!, {r2, r4, r5, r7}\n+\tstmia\tr2!, {r2, r3, r4, r5, r7}\n \tmovs\tr5, r5\n Skim >::getOverlapCriterionLevel(unsigned int, unsigned char, ADSEstimator const&, unsigned char, unsigned char&, unsigned char&):\n ./src/mira/skim.C:2266\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tldr\tr2, [pc, #768]\t@ (116f88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x72df0>)\n \tmov\tr7, r3\n@@ -534434,33 +534434,33 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr2, [r0, #44]\t@ 0x2c\n \tmovs\tr1, r7\n \tstr\tr2, [r4, #36]\t@ 0x24\n \tmovs\tr1, r7\n-\tstmia\tr0!, {r2, r3}\n+\tstmia\tr0!, {r2, r4}\n \tmovs\tr5, r5\n-\tstmia\tr0!, {r2, r3}\n+\tstmia\tr0!, {r2, r4}\n \tmovs\tr5, r5\n-\thlt\t0x0000\n+\thlt\t0x0008\n \tmovs\tr5, r5\n-\tasrs\tr4, r7, #29\n+\tasrs\tr4, r0, #30\n \tmovs\tr6, r5\n \tlsls\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\titt\tvc\n-\tmovvc\tr5, r5\n+\titt\thi\n+\tmovhi\tr5, r5\n bannedoverlappairs_t::checkIfBanned(unsigned int, unsigned int):\n ./src/mira/../../src/mira/skim.H:210\n-\tpushvc\t{r4, r5, r6, r7, lr}\n+\tpushhi\t{r4, r5, r6, r7, lr}\n \tmov\tr5, r0\n \tldr\tr0, [pc, #340]\t@ (117114 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x72f7c>)\n \tldr\tr3, [pc, #344]\t@ (117118 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x72f80>)\n ./src/mira/../../src/mira/skim.H:212\n \tcmp\tr1, r2\n ./src/mira/../../src/mira/skim.H:210\n \tadd\tr0, pc\n@@ -534659,17 +534659,17 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsh\tr4, [r6, r5]\n \tmovs\tr1, r7\n \tldrsh\tr2, [r4, r4]\n \tmovs\tr1, r7\n-\tbkpt\t0x0028\n+\tbkpt\t0x0030\n \tmovs\tr5, r5\n-\tbkpt\t0x001c\n+\tbkpt\t0x0024\n \tmovs\tr5, r5\n \tlsls\tr0, r6, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -535536,43 +535536,43 @@\n \tmovs\tr1, r7\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tldrh\tr4, [r2, r5]\n \tmovs\tr1, r7\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\trevsh\tr4, r0\n+\trevsh\tr4, r1\n \tmovs\tr5, r5\n-\tldrb\tr4, [r7, #9]\n+\tldrb\tr0, [r1, #10]\n \tmovs\tr5, r5\n-\tldrb\tr2, [r6, #9]\n+\tldrb\tr6, [r7, #9]\n \tmovs\tr5, r5\n-\thlt\t0x0006\n+\thlt\t0x000e\n \tmovs\tr5, r5\n-\tcbnz\tr0, 1177b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73620>\n+\tcbnz\tr0, 1177ba , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73622>\n \tmovs\tr5, r5\n \tlsls\tr0, r7, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcbnz\tr4, 1177cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73634>\n+\tcbnz\tr4, 1177ce , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73636>\n \tmovs\tr5, r5\n-\tcbnz\tr4, 1177d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73638>\n+\tcbnz\tr4, 1177d2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7363a>\n \tmovs\tr5, r5\n-\tcbnz\tr6, 1177c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7362c>\n+\tcbnz\tr6, 1177c6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7362e>\n \tmovs\tr5, r5\n-\tstr\tr2, [r4, #80]\t@ 0x50\n+\tstr\tr6, [r5, #80]\t@ 0x50\n \tmovs\tr5, r5\n-\tb.n\t117dfc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73c64>\n+\tb.n\t117e0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73c74>\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xb826\n+\t\t\t@ instruction: 0xb82e\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xb850\n+\t\t\t@ instruction: 0xb858\n \tmovs\tr5, r5\n Skim >::transformSeqToVariableHash(unsigned int, Read const&, char const*, unsigned int, unsigned int, __gnu_cxx::__normal_iterator >::vhrap_t*, std::vector >::vhrap_t, std::allocator >::vhrap_t> > >&, bool, unsigned char, std::vector >&, std::vector > const&, int, int):\n ./src/mira/skim.C:1251\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n \tldr\tr2, [pc, #904]\t@ (117b48 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x739b0>)\n \tvpush\t{d8}\n@@ -536719,47 +536719,47 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t118064 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73ecc>\n \tb.n\t118074 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73edc>\n \tb.n\t118064 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73ecc>\n \tb.n\t118074 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73edc>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcbz\tr2, 118120 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73f88>\n+\tcbz\tr2, 118122 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73f8a>\n \tmovs\tr5, r5\n-\tstrb\tr2, [r3, #14]\n+\tstrb\tr6, [r4, #14]\n \tmovs\tr5, r5\n-\tstrb\tr6, [r1, #14]\n+\tstrb\tr2, [r3, #14]\n \tmovs\tr5, r5\n-\tcbz\tr0, 11811c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73f84>\n+\tcbz\tr0, 11811e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73f86>\n \tmovs\tr5, r5\n \tstrh\tr0, [r5, r5]\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tsp, #440\t@ 0x1b8\n+\tadd\tsp, #472\t@ 0x1d8\n \tmovs\tr5, r5\n \tlsls\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsub\tsp, #0\n+\tsub\tsp, #32\n \tmovs\tr5, r5\n-\tsub\tsp, #0\n+\tsub\tsp, #32\n \tmovs\tr5, r5\n-\tadd\tsp, #224\t@ 0xe0\n+\tadd\tsp, #256\t@ 0x100\n \tmovs\tr5, r5\n-\tldrh\tr4, [r3, r7]\n+\tldrh\tr0, [r5, r7]\n \tmovs\tr5, r5\n-\tbls.n\t1180a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73f08>\n+\tbls.n\t1180b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x73f18>\n \tmovs\tr5, r5\n-\tadd\tr6, sp, #896\t@ 0x380\n+\tadd\tr6, sp, #928\t@ 0x3a0\n \tmovs\tr5, r5\n-\tadd\tr7, sp, #40\t@ 0x28\n+\tadd\tr7, sp, #72\t@ 0x48\n \tmovs\tr5, r5\n Skim >::transformSeqToVariableHash(unsigned int, Read const&, char const*, unsigned int, unsigned int, __gnu_cxx::__normal_iterator >::vhrap_t*, std::vector >::vhrap_t, std::allocator >::vhrap_t> > >&, bool, unsigned char, std::vector >&, std::vector > const&, int, int):\n ./src/mira/skim.C:1251\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n \tldr.w\tr2, [pc, #1200]\t@ 1185a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74408>\n \tvpush\t{d8}\n@@ -538065,43 +538065,43 @@\n \tb.n\t118b1c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74984>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t118af0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74958>\n \tb.n\t118ae8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74950>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #496\t@ 0x1f0\n+\tadd\tr0, sp, #528\t@ 0x210\n \tmovs\tr5, r5\n-\tldr\tr4, [r6, #0]\n+\tldr\tr0, [r0, #4]\n \tmovs\tr5, r5\n-\tldr\tr2, [r5, #0]\n+\tldr\tr6, [r6, #0]\n \tmovs\tr5, r5\n-\tadd\tr0, sp, #240\t@ 0xf0\n+\tadd\tr0, sp, #272\t@ 0x110\n \tmovs\tr5, r5\n-\tadd\tr5, pc, #880\t@ (adr r5, 118eb4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74d1c>)\n+\tadd\tr5, pc, #912\t@ (adr r5, 118ed4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74d3c>)\n \tmovs\tr5, r5\n \tlsrs\tr0, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #960\t@ (adr r5, 118f14 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74d7c>)\n+\tadd\tr5, pc, #992\t@ (adr r5, 118f34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74d9c>)\n \tmovs\tr5, r5\n-\tadd\tr5, pc, #952\t@ (adr r5, 118f10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74d78>)\n+\tadd\tr5, pc, #984\t@ (adr r5, 118f30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74d98>)\n \tmovs\tr5, r5\n-\tadd\tr5, pc, #688\t@ (adr r5, 118e0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74c74>)\n+\tadd\tr5, pc, #720\t@ (adr r5, 118e2c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74c94>)\n \tmovs\tr5, r5\n-\tstr\tr2, [r2, r5]\n+\tstr\tr6, [r3, r5]\n \tmovs\tr5, r5\n-\tldmia\tr7!, {r1, r2, r4, r6}\n+\tldmia\tr7!, {r1, r2, r3, r4, r6}\n \tmovs\tr5, r5\n-\tadd\tr4, pc, #344\t@ (adr r4, 118cc0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74b28>)\n+\tadd\tr4, pc, #376\t@ (adr r4, 118ce0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74b48>)\n \tmovs\tr5, r5\n-\tadd\tr4, pc, #512\t@ (adr r4, 118d6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74bd4>)\n+\tadd\tr4, pc, #544\t@ (adr r4, 118d8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x74bf4>)\n \tmovs\tr5, r5\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n Skim >::transformSeqToVariableHash(unsigned int, Read const&, char const*, unsigned int, unsigned int, __gnu_cxx::__normal_iterator >::vhrap_t*, std::vector >::vhrap_t, std::allocator >::vhrap_t> > >&, bool, unsigned char, std::vector >&, std::vector > const&, int, int):\n ./src/mira/skim.C:1251\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n@@ -539699,43 +539699,43 @@\n \tmovs\tr0, r0\n \tsubs\tr4, #246\t@ 0xf6\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #144]\t@ 0x90\n+\tldr\tr3, [sp, #176]\t@ 0xb0\n \tmovs\tr5, r5\n-\tldrh\tr2, [r3, r3]\n+\tldrh\tr6, [r4, r3]\n \tmovs\tr5, r5\n-\tldrh\tr6, [r1, r3]\n+\tldrh\tr2, [r3, r3]\n \tmovs\tr5, r5\n-\tldr\tr2, [sp, #896]\t@ 0x380\n+\tldr\tr2, [sp, #928]\t@ 0x3a0\n \tmovs\tr5, r5\n-\tldr\tr0, [sp, #464]\t@ 0x1d0\n+\tldr\tr0, [sp, #496]\t@ 0x1f0\n \tmovs\tr5, r5\n \tlsls\tr4, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr0, [sp, #528]\t@ 0x210\n+\tldr\tr0, [sp, #560]\t@ 0x230\n \tmovs\tr5, r5\n-\tldr\tr0, [sp, #520]\t@ 0x208\n+\tldr\tr0, [sp, #552]\t@ 0x228\n \tmovs\tr5, r5\n-\tldr\tr0, [sp, #248]\t@ 0xf8\n+\tldr\tr0, [sp, #280]\t@ 0x118\n \tmovs\tr5, r5\n-\tmvns\tr0, r5\n+\tmvns\tr4, r6\n \tmovs\tr5, r5\n-\tstmia\tr1!, {r2, r3, r5, r6, r7}\n+\tstmia\tr1!, {r2, r4, r5, r6, r7}\n \tmovs\tr5, r5\n-\tstr\tr6, [sp, #944]\t@ 0x3b0\n+\tstr\tr6, [sp, #976]\t@ 0x3d0\n \tmovs\tr5, r5\n-\tstr\tr7, [sp, #88]\t@ 0x58\n+\tstr\tr7, [sp, #120]\t@ 0x78\n \tmovs\tr5, r5\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n Skim::correctReadBaseStatisticsByRMB(ReadPool&, unsigned int):\n ./src/mira/skim.C:3251\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr0, [pc, #480]\t@ (119ab8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x75920>)\n@@ -539981,23 +539981,23 @@\n \teors\tr1, r3\n \tadds\tr6, #130\t@ 0x82\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr6, #122\t@ 0x7a\n \tmovs\tr1, r7\n-\tldr\tr4, [r1, #60]\t@ 0x3c\n+\tldr\tr4, [r2, #60]\t@ 0x3c\n \tmovs\tr6, r5\n-\tsubs\tr0, r7, #2\n+\tsubs\tr0, r0, #3\n \tmovs\tr7, r5\n-\tldrsb\tr2, [r7, r0]\n+\tldrsb\tr6, [r0, r1]\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr2, [r5, r5]\n+\tstrb\tr6, [r6, r5]\n \tmovs\tr5, r5\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/stringcontainer.H:53 (discriminator 2)\n \tldr.w\tip, [pc, #1692]\t@ 11a180 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x75fe8>\n@@ -540742,17 +540742,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tcmp\tr7, #74\t@ 0x4a\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf4b8002c\n-\t\t\t@ instruction: 0xf4b4002c\n-\tlsrs\tr2, r6, #11\n+\t\t\t@ instruction: 0xf4c4002c\n+\t\t\t@ instruction: 0xf4c0002c\n+\tlsrs\tr2, r7, #11\n \tmovs\tr7, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -541002,23 +541002,23 @@\n \teors\tr1, r3\n \tcmp\tr5, #170\t@ 0xaa\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr5, #162\t@ 0xa2\n \tmovs\tr1, r7\n-\tstr\tr4, [r6, #44]\t@ 0x2c\n+\tstr\tr4, [r7, #44]\t@ 0x2c\n \tmovs\tr6, r5\n-\tasrs\tr0, r4, #23\n+\tasrs\tr0, r5, #23\n \tmovs\tr7, r5\n-\tldr\tr5, [pc, #392]\t@ (11a530 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x76398>)\n+\tldr\tr5, [pc, #440]\t@ (11a560 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x763c8>)\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #584]\t@ (11a5f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x76460>)\n+\tldr\tr4, [pc, #632]\t@ (11a628 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x76490>)\n \tmovs\tr5, r5\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/stringcontainer.H:53 (discriminator 2)\n \tldr.w\tip, [pc, #1692]\t@ 11aa58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x768c0>\n@@ -541763,17 +541763,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tmovs\tr6, #114\t@ 0x72\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xebe0002c\n-\trsbs\tr0, ip, ip, asr #32\n-\tlsls\tr2, r3, #8\n+\t\t\t@ instruction: 0xebec002c\n+\t\t\t@ instruction: 0xebe8002c\n+\tlsls\tr2, r4, #8\n \tmovs\tr7, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -542023,23 +542023,23 @@\n \teors\tr1, r3\n \tmovs\tr4, #210\t@ 0xd2\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr4, #202\t@ 0xca\n \tmovs\tr1, r7\n-\tldrh\tr4, [r3, r0]\n+\tldrh\tr4, [r4, r0]\n \tmovs\tr6, r5\n-\tlsrs\tr0, r1, #20\n+\tlsrs\tr0, r2, #20\n \tmovs\tr7, r5\n-\tadd\tsl, r1\n+\tadd\tlr, r2\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbics\tr2, r7\n+\tmvns\tr6, r0\n \tmovs\tr5, r5\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/stringcontainer.H:53 (discriminator 2)\n \tldr.w\tip, [pc, #1692]\t@ 11b330 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x77198>\n@@ -542784,19 +542784,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tadds\tr2, r3, #6\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tb.n\t11b954 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x777bc>\n+\tb.n\t11b96c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x777d4>\n \tmovs\tr4, r5\n-\tb.n\t11b950 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x777b8>\n+\tb.n\t11b968 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x777d0>\n \tmovs\tr4, r5\n-\tvst4.8\t{d16-d19}, [r2 :128], lr\n+\tvst4.8\t{d16-d19}, [sl :128], lr\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Skim >::correctReadBaseStatisticsByRMB(ReadPool&, unsigned int):\n@@ -543045,23 +543045,23 @@\n \teors\tr1, r3\n \tsubs\tr2, r7, r7\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr2, r6, r7\n \tmovs\tr1, r7\n-\tstr\tr4, [r0, r5]\n+\tstr\tr4, [r1, r5]\n \tmovs\tr6, r5\n-\tlsls\tr0, r6, #16\n+\tlsls\tr0, r7, #16\n \tmovs\tr7, r5\n-\tsubs\tr3, #178\t@ 0xb2\n+\tsubs\tr3, #190\t@ 0xbe\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr2, #226\t@ 0xe2\n+\tsubs\tr2, #238\t@ 0xee\n \tmovs\tr5, r5\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/stringcontainer.H:53 (discriminator 2)\n \tldr.w\tip, [pc, #1692]\t@ 11bc08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x77a70>\n@@ -543806,19 +543806,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tasrs\tr2, r0, #19\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbge.n\t11bc7c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x77ae4>\n+\tbge.n\t11bc94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x77afc>\n \tmovs\tr4, r5\n-\tbge.n\t11bc78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x77ae0>\n+\tbge.n\t11bc90 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x77af8>\n \tmovs\tr4, r5\n-\torn\tr0, sl, #46\t@ 0x2e\n+\torns\tr0, r2, #46\t@ 0x2e\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Skim >::computePartition(unsigned int, bool):\n@@ -544127,19 +544127,19 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r3, #12\n \tmovs\tr1, r7\n \tasrs\tr6, r1, #8\n \tmovs\tr1, r7\n-\tadds\tr0, r7, #6\n+\tadds\tr4, r0, #7\n \tmovs\tr5, r5\n-\tstrb\tr6, [r2, #6]\n+\tstrb\tr6, [r3, #6]\n \tmovs\tr5, r5\n-\tstrb\tr0, [r6, #6]\n+\tstrb\tr0, [r7, #6]\n \tmovs\tr5, r5\n \tlsls\tr4, r6, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -544449,19 +544449,19 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #2\n \tmovs\tr1, r7\n \tlsrs\tr2, r1, #30\n \tmovs\tr1, r7\n-\tsubs\tr4, r6, r4\n+\tsubs\tr0, r0, r5\n \tmovs\tr5, r5\n-\tldr\tr2, [r2, #112]\t@ 0x70\n+\tldr\tr2, [r3, #112]\t@ 0x70\n \tmovs\tr5, r5\n-\tldr\tr4, [r5, #112]\t@ 0x70\n+\tldr\tr4, [r6, #112]\t@ 0x70\n \tmovs\tr5, r5\n \tlsrs\tr0, r0, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -544771,19 +544771,19 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #24\n \tmovs\tr1, r7\n \tlsrs\tr6, r0, #20\n \tmovs\tr1, r7\n-\tadds\tr0, r6, r2\n+\tadds\tr4, r7, r2\n \tmovs\tr5, r5\n-\tldr\tr6, [r1, #72]\t@ 0x48\n+\tldr\tr6, [r2, #72]\t@ 0x48\n \tmovs\tr5, r5\n-\tldr\tr0, [r5, #72]\t@ 0x48\n+\tldr\tr0, [r6, #72]\t@ 0x48\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -545093,19 +545093,19 @@\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #14\n \tmovs\tr1, r7\n \tlsrs\tr2, r0, #10\n \tmovs\tr1, r7\n-\tasrs\tr4, r5, #24\n+\tasrs\tr0, r7, #24\n \tmovs\tr5, r5\n-\tldr\tr2, [r1, #32]\n+\tldr\tr2, [r2, #32]\n \tmovs\tr5, r5\n-\tldr\tr4, [r4, #32]\n+\tldr\tr4, [r5, #32]\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -545996,19 +545996,19 @@\n \tmovs\tr1, r7\n \tlsrs\tr4, r1, #4\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr4, r5, #23\n \tmovs\tr1, r7\n-\tldmia\tr1!, {r2, r4, r6}\n+\tldmia\tr1!, {r5, r6}\n \tmovs\tr4, r5\n-\tldmia\tr1!, {r4, r6}\n+\tldmia\tr1!, {r2, r3, r4, r6}\n \tmovs\tr4, r5\n-\tsvc\t144\t@ 0x90\n+\tsvc\t152\t@ 0x98\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -546898,19 +546898,19 @@\n \tlsls\tr2, r1, #11\n \tmovs\tr1, r7\n \tlsls\tr0, r1, #11\n \tmovs\tr1, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvshr.u32\td0, d24, #24\n-\tstmia\tr3!, {r4}\n+\tstmia\tr3!, {r2, r3, r4}\n \tmovs\tr4, r5\n-\tstmia\tr3!, {r2, r3}\n+\tstmia\tr3!, {r3, r4}\n \tmovs\tr4, r5\n-\tbls.n\t11d354 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x791bc>\n+\tbls.n\t11d364 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x791cc>\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -547798,19 +547798,19 @@\n \tb.n\t11d8c2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7972a>\n \tnop\n \tstc2\t0, cr0, [r6], {56}\t@ 0x38\n \tstc2\t0, cr0, [r4], {56}\t@ 0x38\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvld4.8\t{d16-d19}, [r4 :256], r8\n-\tpop\t{r2, r3, r6, r7}\n+\tpop\t{r3, r4, r6, r7}\n \tmovs\tr4, r5\n-\tpop\t{r3, r6, r7}\n+\tpop\t{r2, r4, r6, r7}\n \tmovs\tr4, r5\n-\tbcc.n\t11d910 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x79778>\n+\tbcc.n\t11d920 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x79788>\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -548698,19 +548698,19 @@\n \tb.n\t11df06 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x79d6e>\n \tnop\n \tmovw\tr0, #10296\t@ 0x2838\n \tmovw\tr0, #2104\t@ 0x838\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf3200038\n-\t\t\t@ instruction: 0xb688\n+\t\t\t@ instruction: 0xb694\n \tmovs\tr4, r5\n-\t\t\t@ instruction: 0xb684\n+\t\t\t@ instruction: 0xb690\n \tmovs\tr4, r5\n-\tldmia\tr4!, {r2, r6, r7}\n+\tldmia\tr4!, {r2, r3, r6, r7}\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -549676,15 +549676,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t11e67e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7a4e6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (11e834 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7a69c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr5, sp, #144\t@ 0x90\n+\tadd\tr5, sp, #192\t@ 0xc0\n \tmovs\tr4, r5\n void boost::condition_variable_any::wait >(boost::unique_lock&):\n /usr/include/boost/thread/pthread/condition_variable.hpp:188\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r1\n \tldr\tr1, [pc, #436]\t@ (11e9f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7a85c>)\n \tldr\tr3, [pc, #436]\t@ (11e9f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7a860>)\n@@ -549935,33 +549935,33 @@\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t11e818 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7a680>\n \tmovs\tr0, r7\n \tb.n\t11e734 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7a59c>\n \tmovs\tr0, r7\n-\tmovs\tr0, #246\t@ 0xf6\n+\tmovs\tr1, #2\n \tmovs\tr5, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tadds\tr2, r5, #6\n+\tadds\tr6, r6, #6\n \tmovs\tr5, r5\n-\tldrh\tr4, [r5, #52]\t@ 0x34\n+\tldrh\tr0, [r7, #52]\t@ 0x34\n \tmovs\tr4, r5\n-\tadds\tr2, r0, #7\n+\tadds\tr6, r1, #7\n \tmovs\tr5, r5\n-\tmovs\tr6, #212\t@ 0xd4\n+\tmovs\tr6, #224\t@ 0xe0\n \tmovs\tr5, r5\n-\tmovs\tr6, #108\t@ 0x6c\n+\tmovs\tr6, #120\t@ 0x78\n \tmovs\tr5, r5\n-\tmov\tip, r0\n+\tmov\tip, r1\n \tmovs\tr5, r5\n-\tmovs\tr6, #88\t@ 0x58\n+\tmovs\tr6, #100\t@ 0x64\n \tmovs\tr5, r5\n-\tmovs\tr6, #28\n+\tmovs\tr6, #40\t@ 0x28\n \tmovs\tr5, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n boost::_bi::bind_t, boost::_bi::list_av_1::type> boost::bind, unsigned int>(boost::function, unsigned int):\n /usr/include/boost/bind/bind.hpp:2049\n@@ -552687,15 +552687,15 @@\n \tmovw\tr6, #65504\t@ 0xffe0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t11faae , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7b916>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (11fc24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7ba8c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr1, [sp, #200]\t@ 0xc8\n+\tldr\tr1, [sp, #248]\t@ 0xf8\n \tmovs\tr4, r5\n Skim::farcThreadsDataInit(unsigned int):\n ./src/mira/skim.C:3767\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr2, r1\n \tmov\tr8, r0\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -553166,15 +553166,15 @@\n \tmovw\tr9, #65528\t@ 0xfff8\n \tmovt\tr9, #32767\t@ 0x7fff\n \tb.n\t11ffe2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7be4a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (120004 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7be6c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr6, [r4, #64]\t@ 0x40\n+\tldr\tr2, [r6, #64]\t@ 0x40\n \tmovs\tr4, r5\n std::vector >::push_back(matchwithsorter_t const&):\n /usr/include/c++/10/bits/stl_vector.h:1187\n \tmov\tip, r1\n /usr/include/c++/10/bits/stl_vector.h:1189\n \tldrd\tr1, r3, [r0, #4]\n \tcmp\tr1, r3\n@@ -553670,15 +553670,15 @@\n \tmovw\tr6, #65520\t@ 0xfff0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t120436 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7c29e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (120460 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7c2c8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstr\tr0, [sp, #984]\t@ 0x3d8\n+\tstr\tr1, [sp, #8]\n \tmovs\tr4, r5\n std::vector >::resize(unsigned int):\n /usr/include/c++/10/bits/stl_vector.h:937\n \tpush\t{r4, r5}\n /usr/include/c++/10/bits/stl_vector.h:919\n \tldrd\tr4, r5, [r0]\n \tsubs\tr2, r5, r4\n@@ -554365,15 +554365,15 @@\n \tlsls\tr7, r1, #2\n \tb.n\t120984 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7c7ec>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1209b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7c820>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrh\tr4, [r7, #28]\n+\tldrh\tr0, [r1, #30]\n \tmovs\tr4, r5\n std::vector >::resize(unsigned int, int const&):\n /usr/include/c++/10/bits/stl_vector.h:957\n \tpush\t{r4, lr}\n /usr/include/c++/10/bits/stl_vector.h:919\n \tldrd\tr3, r4, [r0]\n \tsub.w\tlr, r4, r3\n@@ -554771,15 +554771,15 @@\n \tmovw\tr6, #65528\t@ 0xfff8\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t120d3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7cba4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (120d84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7cbec>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrh\tr2, [r2, #62]\t@ 0x3e\n+\tstrh\tr6, [r3, #62]\t@ 0x3e\n \tmovs\tr4, r5\n Skim >::findPerfectRailMatchesInSkimFile(std::__cxx11::basic_string, std::allocator >&, signed char, std::vector >&):\n ./src/mira/skim.C:715\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n ./src/mira/skim.C:723\n \tldr.w\tr1, [pc, #1344]\t@ 1212d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d138>\n@@ -555461,15 +555461,15 @@\n \tcmp\tr1, #0\n \tit\tne\n \tmovne\tr8, r7\n ./src/mira/skim.C:780\n \tstrb.w\tip, [r3, r8]\n \tb.n\t120f04 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7cd6c>\n \t...\n-\tmovs\tr2, #138\t@ 0x8a\n+\tmovs\tr2, #146\t@ 0x92\n \tmovs\tr5, r5\n \tstmia\tr1!, {r2, r3, r4, r5, r7}\n \tmovs\tr0, r7\n \tstmia\tr1!, {r1, r4, r5, r7}\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n@@ -555481,31 +555481,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr6, [r0, #38]\t@ 0x26\n+\tstrh\tr2, [r2, #38]\t@ 0x26\n \tmovs\tr4, r5\n-\tstrh\tr2, [r0, #38]\t@ 0x26\n+\tstrh\tr6, [r1, #38]\t@ 0x26\n \tmovs\tr4, r5\n-\tldr\tr3, [sp, #8]\n+\tldr\tr3, [sp, #40]\t@ 0x28\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr4, [r0, #30]\n+\tstrh\tr0, [r2, #30]\n \tmovs\tr4, r5\n-\tstrh\tr0, [r7, #28]\n+\tstrh\tr4, [r0, #30]\n \tmovs\tr4, r5\n-\tadd\tr3, sp, #536\t@ 0x218\n+\tadd\tr3, sp, #568\t@ 0x238\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r5, #0]\n /usr/include/c++/10/bits/stl_vector.h:353\n \tcbz\tr0, 12132c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d194>\n@@ -555864,35 +555864,35 @@\n \tstr.w\tr0, [r3, #-208]\n \tb.n\t121594 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d3fc>\n \tnop\n \tpop\t{r4, r5}\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr2, [r2, #12]\n+\tstrh\tr6, [r3, #12]\n \tmovs\tr4, r5\n-\tstrh\tr6, [r1, #12]\n+\tstrh\tr2, [r3, #12]\n \tmovs\tr4, r5\n-\tstr\tr7, [sp, #824]\t@ 0x338\n+\tstr\tr7, [sp, #856]\t@ 0x358\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr0, [r5, #8]\n+\tstrh\tr4, [r6, #8]\n \tmovs\tr4, r5\n-\tstrh\tr4, [r3, #8]\n+\tstrh\tr0, [r5, #8]\n \tmovs\tr4, r5\n-\tadd\tr0, sp, #936\t@ 0x3a8\n+\tadd\tr0, sp, #968\t@ 0x3c8\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tbls.n\t121580 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d3e8>\n+\tbls.n\t121598 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d400>\n \tmovs\tr4, r5\n \tlsrs\tr0, r4, #27\n \tmovs\tr0, r0\n Skim >::findPerfectRailMatchesInSkimFile(std::__cxx11::basic_string, std::allocator >&, signed char, std::vector >&):\n ./src/mira/skim.C:715\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n@@ -556576,15 +556576,15 @@\n \tcmp\tr1, #0\n \tit\tne\n \tmovne\tr8, r7\n ./src/mira/skim.C:780\n \tstrb.w\tip, [r3, r8]\n \tb.n\t12177c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d5e4>\n \t...\n-\tsubs\tr2, r2, r0\n+\tsubs\tr2, r3, r0\n \tmovs\tr5, r5\n \tcbnz\tr4, 121b60 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d9c8>\n \tmovs\tr0, r7\n \tcbnz\tr2, 121b62 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7d9ca>\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n@@ -556596,31 +556596,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr6, [r1, #17]\n+\tldrb\tr2, [r3, #17]\n \tmovs\tr4, r5\n-\tldrb\tr2, [r1, #17]\n+\tldrb\tr6, [r2, #17]\n \tmovs\tr4, r5\n-\tstr\tr2, [sp, #552]\t@ 0x228\n+\tstr\tr2, [sp, #584]\t@ 0x248\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr4, [r1, #13]\n+\tldrb\tr0, [r3, #13]\n \tmovs\tr4, r5\n-\tldrb\tr0, [r0, #13]\n+\tldrb\tr4, [r1, #13]\n \tmovs\tr4, r5\n-\tadd\tr3, pc, #56\t@ (adr r3, 121bcc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7da34>)\n+\tadd\tr3, pc, #88\t@ (adr r3, 121bec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7da54>)\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r5, #0]\n /usr/include/c++/10/bits/stl_vector.h:353\n \tcbz\tr0, 121ba4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7da0c>\n@@ -556979,35 +556979,35 @@\n \tstr.w\tr0, [r3, #-208]\n \tb.n\t121e0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7dc74>\n \tnop\n \tcbz\tr0, 121eb2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7dd1a>\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr2, [r3, #4]\n+\tldrb\tr6, [r4, #4]\n \tmovs\tr4, r5\n-\tldrb\tr6, [r2, #4]\n+\tldrb\tr2, [r4, #4]\n \tmovs\tr4, r5\n-\tldrh\tr6, [r2, #58]\t@ 0x3a\n+\tldrh\tr6, [r3, #58]\t@ 0x3a\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr0, [r6, #2]\n+\tldrb\tr4, [r7, #2]\n \tmovs\tr4, r5\n-\tldrb\tr4, [r4, #2]\n+\tldrb\tr0, [r6, #2]\n \tmovs\tr4, r5\n-\tadd\tr0, pc, #456\t@ (adr r0, 122034 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7de9c>)\n+\tadd\tr0, pc, #488\t@ (adr r0, 122054 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7debc>)\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tbne.n\t121f08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7dd70>\n+\tbne.n\t121f20 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7dd88>\n \tmovs\tr4, r5\n \tlsrs\tr0, r1, #7\n \tmovs\tr0, r0\n Skim::findPerfectRailMatchesInSkimFile(std::__cxx11::basic_string, std::allocator >&, signed char, std::vector >&):\n ./src/mira/skim.C:715\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n@@ -557691,15 +557691,15 @@\n \tcmp\tr1, #0\n \tit\tne\n \tmovne\tr8, r7\n ./src/mira/skim.C:780\n \tstrb.w\tip, [r3, r8]\n \tb.n\t121ff4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7de5c>\n \t...\n-\tasrs\tr2, r3, #6\n+\tasrs\tr2, r4, #6\n \tmovs\tr5, r5\n \tsub\tsp, #304\t@ 0x130\n \tmovs\tr0, r7\n \tsub\tsp, #264\t@ 0x108\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n@@ -557711,31 +557711,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr6, [r2, #15]\n+\tstrb\tr2, [r4, #15]\n \tmovs\tr4, r5\n-\tstrb\tr2, [r2, #15]\n+\tstrb\tr6, [r3, #15]\n \tmovs\tr4, r5\n-\tldrh\tr2, [r2, #16]\n+\tldrh\tr2, [r3, #16]\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr4, [r2, #11]\n+\tstrb\tr0, [r4, #11]\n \tmovs\tr4, r5\n-\tstrb\tr0, [r1, #11]\n+\tstrb\tr4, [r2, #11]\n \tmovs\tr4, r5\n-\tldr\tr2, [sp, #600]\t@ 0x258\n+\tldr\tr2, [sp, #632]\t@ 0x278\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r5, #0]\n /usr/include/c++/10/bits/stl_vector.h:353\n \tcbz\tr0, 12241c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7e284>\n@@ -558094,35 +558094,35 @@\n \tstr.w\tr0, [r3, #-208]\n \tb.n\t122684 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7e4ec>\n \tnop\n \tadd\tr3, sp, #256\t@ 0x100\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrb\tr2, [r4, #2]\n+\tstrb\tr6, [r5, #2]\n \tmovs\tr4, r5\n-\tstrb\tr6, [r3, #2]\n+\tstrb\tr2, [r5, #2]\n \tmovs\tr4, r5\n-\tstrh\tr6, [r3, #54]\t@ 0x36\n+\tstrh\tr6, [r4, #54]\t@ 0x36\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr0, [r7, #0]\n+\tstrb\tr4, [r0, #1]\n \tmovs\tr4, r5\n-\tstrb\tr4, [r5, #0]\n+\tstrb\tr0, [r7, #0]\n \tmovs\tr4, r5\n-\tstr\tr7, [sp, #1000]\t@ 0x3e8\n+\tldr\tr0, [sp, #8]\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r1, r4, r6, r7}\n+\tldmia\tr0!, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr4, r5\n \tlsrs\tr4, r4, #29\n \tmovs\tr0, r0\n Skim >::findPerfectRailMatchesInSkimFile(std::__cxx11::basic_string, std::allocator >&, signed char, std::vector >&):\n ./src/mira/skim.C:715\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n@@ -558806,15 +558806,15 @@\n \tcmp\tr1, #0\n \tit\tne\n \tmovne\tr8, r7\n ./src/mira/skim.C:780\n \tstrb.w\tip, [r3, r8]\n \tb.n\t12286c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7e6d4>\n \t...\n-\tlsrs\tr2, r4, #4\n+\tlsrs\tr2, r5, #4\n \tmovs\tr5, r5\n \tadd\tr0, sp, #336\t@ 0x150\n \tmovs\tr0, r7\n \tadd\tr0, sp, #296\t@ 0x128\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n@@ -558826,31 +558826,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr6, [r3, #52]\t@ 0x34\n+\tldr\tr2, [r5, #52]\t@ 0x34\n \tmovs\tr4, r5\n-\tldr\tr2, [r3, #52]\t@ 0x34\n+\tldr\tr6, [r4, #52]\t@ 0x34\n \tmovs\tr4, r5\n-\tstrh\tr2, [r3, #12]\n+\tstrh\tr2, [r4, #12]\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr4, [r3, #36]\t@ 0x24\n+\tldr\tr0, [r5, #36]\t@ 0x24\n \tmovs\tr4, r5\n-\tldr\tr0, [r2, #36]\t@ 0x24\n+\tldr\tr4, [r3, #36]\t@ 0x24\n \tmovs\tr4, r5\n-\tstr\tr2, [sp, #120]\t@ 0x78\n+\tstr\tr2, [sp, #152]\t@ 0x98\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r5, #0]\n /usr/include/c++/10/bits/stl_vector.h:353\n \tcbz\tr0, 122c94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7eafc>\n@@ -559209,35 +559209,35 @@\n \tstr.w\tr0, [r3, #-208]\n \tb.n\t122efc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7ed64>\n \tnop\n \tadd\tr2, pc, #800\t@ (adr r2, 123254 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7f0bc>)\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [r5, #0]\n+\tldr\tr6, [r6, #0]\n \tmovs\tr4, r5\n-\tldr\tr6, [r4, #0]\n+\tldr\tr2, [r6, #0]\n \tmovs\tr4, r5\n-\tldrb\tr6, [r4, #25]\n+\tldrb\tr6, [r5, #25]\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr0, [r0, #124]\t@ 0x7c\n+\tstr\tr4, [r1, #124]\t@ 0x7c\n \tmovs\tr4, r5\n-\tstr\tr4, [r6, #120]\t@ 0x78\n+\tstr\tr0, [r0, #124]\t@ 0x7c\n \tmovs\tr4, r5\n-\tldrh\tr2, [r0, #60]\t@ 0x3c\n+\tldrh\tr2, [r1, #60]\t@ 0x3c\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r1, r3, r4, r6}\n+\tstmia\tr0!, {r1, r2, r5, r6}\n \tmovs\tr4, r5\n \tlsrs\tr0, r6, #20\n \tmovs\tr0, r0\n std::vector >::resize(unsigned int, unsigned int const&):\n /usr/include/c++/10/bits/stl_vector.h:957\n \tpush\t{r4, lr}\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -561003,88 +561003,88 @@\n \t...\n \tldr\tr7, [sp, #704]\t@ 0x2c0\n \tmovs\tr0, r7\n \tldr\tr7, [sp, #648]\t@ 0x288\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsls\tr2, r0, #1\n+\tlsls\tr2, r1, #1\n \tmovs\tr5, r5\n-\tvaddl.u32\tq8, d12, d28\n+\tvrev64.16\td16, d28\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tvaddl.u16\tq0, d6, d28\n-\tcdp2\t0, 14, cr0, cr14, cr12, {1}\n-\tcdp2\t0, 10, cr0, cr12, cr12, {1}\n-\tcdp2\t0, 4, cr0, cr2, cr12, {1}\n+\tvaddl.u16\tq0, d14, d28\n+\tcdp2\t0, 15, cr0, cr6, cr12, {1}\n+\tcdp2\t0, 11, cr0, cr4, cr12, {1}\n+\tcdp2\t0, 4, cr0, cr10, cr12, {1}\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr0, [r7, #0]\n+\tstr\tr4, [r0, #4]\n \tmovs\tr4, r5\n-\tstr\tr2, [r6, #0]\n+\tstr\tr6, [r7, #0]\n \tmovs\tr4, r5\n-\tstrb\tr0, [r6, #25]\n+\tstrb\tr0, [r7, #25]\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrh.w\tr0, [r0, #44]\t@ 0x2c\n-\tsubs\tr4, r0, r5\n+\tldrh.w\tr0, [r8, #44]\t@ 0x2c\n+\tsubs\tr4, r1, r5\n \tmovs\tr7, r5\n-\tcmp\tr1, #62\t@ 0x3e\n+\tcmp\tr1, #70\t@ 0x46\n \tmovs\tr7, r5\n-\tcmp\tr4, #48\t@ 0x30\n+\tcmp\tr4, #56\t@ 0x38\n \tmovs\tr7, r5\n-\tsubs\tr2, r6, r3\n+\tsubs\tr2, r7, r3\n \tmovs\tr7, r5\n-\tcmp\tr0, #236\t@ 0xec\n+\tcmp\tr0, #244\t@ 0xf4\n \tmovs\tr7, r5\n-\tcmp\tr3, #222\t@ 0xde\n+\tcmp\tr3, #230\t@ 0xe6\n \tmovs\tr7, r5\n-\tsubs\tr6, r5, r1\n+\tsubs\tr6, r6, r1\n \tmovs\tr7, r5\n-\tcmp\tr0, #106\t@ 0x6a\n+\tcmp\tr0, #114\t@ 0x72\n \tmovs\tr7, r5\n-\tcmp\tr3, #94\t@ 0x5e\n+\tcmp\tr3, #102\t@ 0x66\n \tmovs\tr7, r5\n-\tsubs\tr2, r4, r0\n+\tsubs\tr2, r5, r0\n \tmovs\tr7, r5\n-\tcmp\tr0, #30\n+\tcmp\tr0, #38\t@ 0x26\n \tmovs\tr7, r5\n-\tcmp\tr3, #18\n+\tcmp\tr3, #26\n \tmovs\tr7, r5\n-\t\t\t@ instruction: 0xf71e002c\n-\tmovs\tr7, #220\t@ 0xdc\n+\t\t\t@ instruction: 0xf726002c\n+\tmovs\tr7, #228\t@ 0xe4\n \tmovs\tr7, r5\n-\tcmp\tr2, #218\t@ 0xda\n+\tcmp\tr2, #226\t@ 0xe2\n \tmovs\tr7, r5\n-\tldrh\tr6, [r2, r1]\n+\tldrh\tr2, [r4, r1]\n \tmovs\tr4, r5\n-\tldrh\tr2, [r2, r1]\n+\tldrh\tr6, [r3, r1]\n \tmovs\tr4, r5\n-\tstrb\tr2, [r2, #2]\n+\tstrb\tr2, [r3, #2]\n \tmovs\tr6, r5\n-\tldr\tr2, [r2, r5]\n+\tldr\tr6, [r3, r5]\n \tmovs\tr4, r5\n-\tldr\tr6, [r0, r5]\n+\tldr\tr2, [r2, r5]\n \tmovs\tr4, r5\n-\tstrh\tr6, [r2, #8]\n+\tstrh\tr6, [r3, #8]\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/readpool.H:218\n \tmov\tr1, r6\n \tmov\tr0, r5\n ./src/mira/skim.C:888\n@@ -562959,94 +562959,94 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr4, [r7, r3]\n+\tstrb\tr0, [r1, r4]\n \tmovs\tr4, r5\n-\tstrb\tr6, [r5, r3]\n+\tstrb\tr2, [r7, r3]\n \tmovs\tr4, r5\n-\tldrb\tr4, [r7, #18]\n+\tldrb\tr4, [r0, #19]\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tbge.n\t124ba8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80a10>\n+\tbge.n\t124bc0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80a28>\n \tmovs\tr4, r5\n \tlsrs\tr4, r7, #25\n \tmovs\tr0, r0\n-\tvaddl.s32\tq0, d14, d28\n-\tldr\tr2, [pc, #744]\t@ (124e78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80ce0>)\n+\tvext.8\td0, d6, d28, #0\n+\tldr\tr2, [pc, #792]\t@ (124ea8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80d10>)\n \tmovs\tr4, r5\n-\tadds\tr4, r1, #0\n+\tadds\tr4, r2, #0\n \tmovs\tr7, r5\n-\tldr\tr4, [sp, #136]\t@ 0x88\n+\tldr\tr4, [sp, #168]\t@ 0xa8\n \tmovs\tr5, r5\n-\tldr\tr4, [sp, #128]\t@ 0x80\n+\tldr\tr4, [sp, #160]\t@ 0xa0\n \tmovs\tr5, r5\n-\tldr\tr4, [sp, #120]\t@ 0x78\n+\tldr\tr4, [sp, #152]\t@ 0x98\n \tmovs\tr5, r5\n-\tldr\tr3, [sp, #672]\t@ 0x2a0\n+\tldr\tr3, [sp, #704]\t@ 0x2c0\n \tmovs\tr5, r5\n-\tldr\tr3, [sp, #552]\t@ 0x228\n+\tldr\tr3, [sp, #584]\t@ 0x248\n \tmovs\tr5, r5\n-\tldr\tr3, [sp, #440]\t@ 0x1b8\n+\tldr\tr3, [sp, #472]\t@ 0x1d8\n \tmovs\tr5, r5\n-\tcdp\t0, 11, cr0, cr6, cr12, {1}\n+\tcdp\t0, 11, cr0, cr14, cr12, {1}\n \tldrh\tr4, [r6, #34]\t@ 0x22\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr2, [r6, r6]\n+\tstr\tr6, [r7, r6]\n \tmovs\tr4, r5\n-\tstr\tr4, [r5, r6]\n+\tstr\tr0, [r7, r6]\n \tmovs\tr4, r5\n-\tstr\tr2, [r5, #124]\t@ 0x7c\n+\tstr\tr2, [r6, #124]\t@ 0x7c\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tstc\t0, cr0, [r0], #-176\t@ 0xffffff50\n-\tlsrs\tr4, r4, #26\n+\tstc\t0, cr0, [r8], #-176\t@ 0xffffff50\n+\tlsrs\tr4, r5, #26\n \tmovs\tr7, r5\n-\tadds\tr6, r3, #2\n+\tadds\tr6, r4, #2\n \tmovs\tr7, r5\n-\tsubs\tr0, r2, #6\n+\tsubs\tr0, r3, #6\n \tmovs\tr7, r5\n-\tlsrs\tr2, r2, #25\n+\tlsrs\tr2, r3, #25\n \tmovs\tr7, r5\n-\tadds\tr4, r1, #1\n+\tadds\tr4, r2, #1\n \tmovs\tr7, r5\n-\tsubs\tr6, r7, #4\n+\tsubs\tr6, r0, #5\n \tmovs\tr7, r5\n-\tlsrs\tr6, r1, #23\n+\tlsrs\tr6, r2, #23\n \tmovs\tr7, r5\n-\tsubs\tr0, r1, r7\n+\tsubs\tr0, r2, r7\n \tmovs\tr7, r5\n-\tsubs\tr2, r7, #2\n+\tsubs\tr2, r0, #3\n \tmovs\tr7, r5\n-\tlsrs\tr4, r7, #21\n+\tlsrs\tr4, r0, #22\n \tmovs\tr7, r5\n-\tsubs\tr6, r6, r5\n+\tsubs\tr6, r7, r5\n \tmovs\tr7, r5\n-\tsubs\tr0, r5, #1\n+\tsubs\tr0, r6, #1\n \tmovs\tr7, r5\n-\torns\tr0, r2, ip, asr #32\n-\tsubs\tr6, r5, r4\n+\torns\tr0, sl, ip, asr #32\n+\tsubs\tr6, r6, r4\n \tmovs\tr7, r5\n-\tsubs\tr2, r5, #0\n+\tsubs\tr2, r6, #0\n \tmovs\tr7, r5\n-\tadd\tr6, pc, #392\t@ (adr r6, 124d94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80bfc>)\n+\tadd\tr6, pc, #440\t@ (adr r6, 124dc4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80c2c>)\n \tmovs\tr4, r5\n-\tstmia.w\tr4, {r2, r3, r5}\n-\tb.n\t124b6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x809d4>\n+\tstmia.w\tip, {r2, r3, r5}\n+\tb.n\t124b7c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x809e4>\n \tmovs\tr4, r5\n Skim::purgeMatchFileIfNeeded(signed char):\n ./src/mira/skim.C:664\n \tldr\tr2, [pc, #432]\t@ (124dc8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80c30>)\n \tldr\tr3, [pc, #436]\t@ (124dcc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x80c34>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -563272,15 +563272,15 @@\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr6, [r6, #24]\n \tmovs\tr0, r7\n \tstrh\tr2, [r4, #22]\n \tmovs\tr0, r7\n-\tb.n\t124658 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x804c0>\n+\tb.n\t124668 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x804d0>\n \tmovs\tr4, r5\n \tasrs\tr0, r0, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -565018,91 +565018,91 @@\n \t...\n \tstrh\tr0, [r5, #10]\n \tmovs\tr0, r7\n \tstrh\tr2, [r3, #10]\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tb.n\t125ebc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81d24>\n+\tb.n\t125ecc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81d34>\n \tmovs\tr4, r5\n-\tb.n\t125e14 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81c7c>\n+\tb.n\t125e24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81c8c>\n \tmovs\tr4, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t125d70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81bd8>\n+\tb.n\t125d80 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81be8>\n \tmovs\tr4, r5\n-\tb.n\t125c24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81a8c>\n+\tb.n\t125c34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81a9c>\n \tmovs\tr4, r5\n-\tb.n\t125ba4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81a0c>\n+\tb.n\t125bb4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81a1c>\n \tmovs\tr4, r5\n-\tsvc\t250\t@ 0xfa\n+\tb.n\t125ae4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8194c>\n \tmovs\tr4, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\trors\tr0, r6\n+\trors\tr4, r7\n \tmovs\tr4, r5\n-\trors\tr2, r5\n+\trors\tr6, r6\n \tmovs\tr4, r5\n-\tldr\tr0, [r5, r0]\n+\tldr\tr0, [r6, r0]\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tbge.n\t125be4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81a4c>\n+\tbge.n\t125bf4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x81a5c>\n \tmovs\tr4, r5\n-\tldc2l\t0, cr0, [ip], #184\t@ 0xb8\n-\tlsrs\tr6, r6, #11\n+\tstc2\t0, cr0, [r4, #-184]\t@ 0xffffff48\n+\tlsrs\tr6, r7, #11\n \tmovs\tr7, r5\n-\tlsrs\tr0, r5, #23\n+\tlsrs\tr0, r6, #23\n \tmovs\tr7, r5\n-\tstc2\t0, cr0, [sl], #184\t@ 0xb8\n-\tlsrs\tr4, r4, #10\n+\tldc2\t0, cr0, [r2], #184\t@ 0xb8\n+\tlsrs\tr4, r5, #10\n \tmovs\tr7, r5\n-\tlsrs\tr6, r2, #22\n+\tlsrs\tr6, r3, #22\n \tmovs\tr7, r5\n-\tstc2\t0, cr0, [r6], #-184\t@ 0xffffff48\n-\tlsrs\tr2, r4, #8\n+\tstc2\t0, cr0, [lr], #-184\t@ 0xffffff48\n+\tlsrs\tr2, r5, #8\n \tmovs\tr7, r5\n-\tlsrs\tr6, r2, #20\n+\tlsrs\tr6, r3, #20\n \tmovs\tr7, r5\n-\t\t\t@ instruction: 0xfbda002e\n-\tlsrs\tr6, r2, #7\n+\t\t\t@ instruction: 0xfbe2002e\n+\tlsrs\tr6, r3, #7\n \tmovs\tr7, r5\n-\tlsrs\tr2, r1, #19\n+\tlsrs\tr2, r2, #19\n \tmovs\tr7, r5\n-\tbhi.n\t125af4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8195c>\n+\tbhi.n\t125b04 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8196c>\n \tmovs\tr4, r5\n-\tlsrs\tr4, r2, #6\n+\tlsrs\tr4, r3, #6\n \tmovs\tr7, r5\n-\tlsrs\tr2, r2, #18\n+\tlsrs\tr2, r3, #18\n \tmovs\tr7, r5\n-\tsubs\tr4, #14\n+\tsubs\tr4, #26\n \tmovs\tr4, r5\n-\tsubs\tr4, #10\n+\tsubs\tr4, #22\n \tmovs\tr4, r5\n-\tstrh\tr2, [r1, r1]\n+\tstrh\tr2, [r2, r1]\n \tmovs\tr6, r5\n-\tsubs\tr3, #10\n+\tsubs\tr3, #22\n \tmovs\tr4, r5\n-\tsubs\tr2, #254\t@ 0xfe\n+\tsubs\tr3, #10\n \tmovs\tr4, r5\n-\tstr\tr6, [r1, #44]\t@ 0x2c\n+\tstr\tr6, [r2, #44]\t@ 0x2c\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/readpool.H:218\n \tmov\tr1, r6\n \tmov\tr0, r5\n ./src/mira/skim.C:888\n@@ -566977,88 +566977,88 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr6, #180\t@ 0xb4\n+\tadds\tr6, #192\t@ 0xc0\n \tmovs\tr4, r5\n-\tadds\tr6, #166\t@ 0xa6\n+\tadds\tr6, #178\t@ 0xb2\n \tmovs\tr4, r5\n-\tldrsh\tr4, [r6, r1]\n+\tldrsh\tr4, [r7, r1]\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tcbnz\tr2, 126a3e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x828a6>\n+\tcbnz\tr6, 126a40 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x828a8>\n \tmovs\tr4, r5\n \tlsrs\tr4, r0, #17\n \tmovs\tr0, r0\n-\tbne.n\t126aa0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x82908>\n+\tbne.n\t126ab0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x82918>\n \tmovs\tr4, r5\n-\tcmp\tr4, #114\t@ 0x72\n+\tcmp\tr4, #126\t@ 0x7e\n \tmovs\tr4, r5\n-\tstc2l\t0, cr0, [r4, #184]\t@ 0xb8\n-\tldrb\tr2, [r3, #23]\n+\tstc2l\t0, cr0, [ip, #184]\t@ 0xb8\n+\tldrb\tr2, [r4, #23]\n \tmovs\tr5, r5\n-\tldrb\tr0, [r3, #23]\n+\tldrb\tr0, [r4, #23]\n \tmovs\tr5, r5\n-\tldrb\tr6, [r2, #23]\n+\tldrb\tr6, [r3, #23]\n \tmovs\tr5, r5\n-\tldrb\tr0, [r4, #21]\n+\tldrb\tr0, [r5, #21]\n \tmovs\tr5, r5\n-\tldrb\tr2, [r0, #21]\n+\tldrb\tr2, [r1, #21]\n \tmovs\tr5, r5\n-\tldrb\tr6, [r4, #20]\n+\tldrb\tr6, [r5, #20]\n \tmovs\tr5, r5\n-\tbeq.n\t126ad4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8293c>\n+\tbeq.n\t126ae4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8294c>\n \tmovs\tr4, r5\n \tldr\tr4, [r5, #96]\t@ 0x60\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadds\tr3, #106\t@ 0x6a\n+\tadds\tr3, #118\t@ 0x76\n \tmovs\tr4, r5\n-\tadds\tr3, #100\t@ 0x64\n+\tadds\tr3, #112\t@ 0x70\n \tmovs\tr4, r5\n-\tldr\tr1, [pc, #648]\t@ (126c94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x82afc>)\n+\tldr\tr1, [pc, #680]\t@ (126cb4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x82b1c>)\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r3, r4, r6, r7}\n+\tldmia\tr5, {r5, r6, r7}\n \tmovs\tr4, r5\n-\torrs.w\tr0, ip, #46\t@ 0x2e\n-\tcdp2\t0, 5, cr0, cr6, cr14, {1}\n-\tlsls\tr0, r1, #5\n+\torn\tr0, r4, #46\t@ 0x2e\n+\tcdp2\t0, 5, cr0, cr14, cr14, {1}\n+\tlsls\tr0, r2, #5\n \tmovs\tr7, r5\n-\tand.w\tr0, sl, #46\t@ 0x2e\n-\tcdp2\t0, 0, cr0, cr4, cr14, {1}\n-\tlsls\tr6, r6, #3\n+\tands.w\tr0, r2, #46\t@ 0x2e\n+\tcdp2\t0, 0, cr0, cr12, cr14, {1}\n+\tlsls\tr6, r7, #3\n \tmovs\tr7, r5\n-\tvaddl.s8\tq0, d6, d30\n-\tstc2\t0, cr0, [r0, #184]\t@ 0xb8\n-\tlsls\tr2, r6, #1\n+\tvaddl.s8\tq0, d14, d30\n+\tstc2\t0, cr0, [r8, #184]\t@ 0xb8\n+\tlsls\tr2, r7, #1\n \tmovs\tr7, r5\n-\tvhadd.s\td0, d4, d30\n-\tstc2\t0, cr0, [lr, #-184]!\t@ 0xffffff48\n-\tmovs\tr0, r4\n+\tvhadd.s\td0, d12, d30\n+\tldc2\t0, cr0, [r6, #-184]!\t@ 0xffffff48\n+\tmovs\tr0, r5\n \tmovs\tr7, r5\n-\tldmia\tr4!, {r1, r3, r5}\n+\tldmia\tr4, {r1, r4, r5}\n \tmovs\tr4, r5\n-\tstc2l\t0, cr0, [r6], #184\t@ 0xb8\n-\tvaddl.u32\tq8, d2, d30\n-\tldrh\tr2, [r3, #0]\n+\tstc2l\t0, cr0, [lr], #184\t@ 0xb8\n+\tvaddl.u32\tq8, d10, d30\n+\tldrh\tr6, [r4, #0]\n \tmovs\tr4, r5\n-\tldmia\tr2, {r2, r3, r4, r5}\n+\tldmia\tr2, {r2, r6}\n \tmovs\tr4, r5\n-\tldmia\tr1!, {r2, r5, r6}\n+\tldmia\tr1!, {r2, r3, r5, r6}\n \tmovs\tr4, r5\n Skim >::purgeMatchFileIfNeeded(signed char):\n ./src/mira/skim.C:664\n \tldr\tr2, [pc, #432]\t@ (126c10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x82a78>)\n \tldr\tr3, [pc, #436]\t@ (126c14 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x82a7c>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -567284,15 +567284,15 @@\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [r5, #76]\t@ 0x4c\n \tmovs\tr0, r7\n \tstr\tr2, [r3, #72]\t@ 0x48\n \tmovs\tr0, r7\n-\tstmia\tr5!, {r1, r2, r4, r5, r6, r7}\n+\tstmia\tr5!, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr4, r5\n \tlsls\tr4, r5, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -569030,85 +569030,85 @@\n \t...\n \tstr\tr0, [r4, #48]\t@ 0x30\n \tmovs\tr0, r7\n \tstr\tr2, [r2, #48]\t@ 0x30\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r4, r5, r7}\n+\tstmia\tr3!, {r1, r3, r4, r5, r7}\n \tmovs\tr4, r5\n-\tstmia\tr3!, {r2, r3, r4, r6}\n+\tstmia\tr3!, {r2, r5, r6}\n \tmovs\tr4, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r2}\n+\tstmia\tr3!, {r1, r2, r3}\n \tmovs\tr4, r5\n-\tstmia\tr2!, {r1, r2, r3, r4, r6}\n+\tstmia\tr2!, {r1, r2, r5, r6}\n \tmovs\tr4, r5\n-\tstmia\tr2!, {r2, r3, r4}\n+\tstmia\tr2!, {r2, r5}\n \tmovs\tr4, r5\n-\tstmia\tr1!, {r1, r4, r5, r7}\n+\tstmia\tr1!, {r1, r3, r4, r5, r7}\n \tmovs\tr4, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr3, #168\t@ 0xa8\n+\tmovs\tr3, #180\t@ 0xb4\n \tmovs\tr4, r5\n-\tmovs\tr3, #162\t@ 0xa2\n+\tmovs\tr3, #174\t@ 0xae\n \tmovs\tr4, r5\n-\tsubs\tr1, #224\t@ 0xe0\n+\tsubs\tr1, #232\t@ 0xe8\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tpop\t{r5}\n+\tpop\t{r3, r5}\n \tmovs\tr4, r5\n-\tudf\t#180\t@ 0xb4\n+\tudf\t#188\t@ 0xbc\n \tmovs\tr6, r5\n-\tstc\t0, cr0, [lr], #184\t@ 0xb8\n-\tvaddl.s32\tq0, d0, d30\n-\tudf\t#98\t@ 0x62\n+\tldc\t0, cr0, [r6], #184\t@ 0xb8\n+\tvaddl.s32\tq0, d8, d30\n+\tudf\t#106\t@ 0x6a\n \tmovs\tr6, r5\n-\tmrrc\t0, 2, r0, ip, cr14\n-\tvhadd.s8\td16, d14, d30\n-\tble.n\t127934 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8379c>\n+\tstcl\t0, cr0, [r4], #-184\t@ 0xffffff48\n+\tvhadd.s16\td16, d6, d30\n+\tble.n\t127944 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x837ac>\n \tmovs\tr6, r5\n-\trsbs\tr0, sl, lr, asr #32\n-\tcdp\t0, 12, cr0, cr14, cr14, {1}\n-\tble.n\t1278a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x83710>\n+\t\t\t@ instruction: 0xebe2002e\n+\tcdp\t0, 13, cr0, cr6, cr14, {1}\n+\tble.n\t1278b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x83720>\n \tmovs\tr6, r5\n-\t\t\t@ instruction: 0xeb8e002e\n-\tcdp\t0, 8, cr0, cr2, cr14, {1}\n-\thlt\t0x000e\n+\t\t\t@ instruction: 0xeb96002e\n+\tcdp\t0, 8, cr0, cr10, cr14, {1}\n+\thlt\t0x0016\n \tmovs\tr4, r5\n-\tadc.w\tr0, ip, lr, asr #32\n-\tcdp\t0, 4, cr0, cr10, cr14, {1}\n-\tadds\tr6, r0, #7\n+\tadcs.w\tr0, r4, lr, asr #32\n+\tcdp\t0, 5, cr0, cr2, cr14, {1}\n+\tadds\tr2, r2, #7\n \tmovs\tr4, r5\n-\tadds\tr2, r0, #7\n+\tadds\tr6, r1, #7\n \tmovs\tr4, r5\n-\tadds\tr4, #2\n+\tadds\tr4, #10\n \tmovs\tr6, r5\n-\tadds\tr2, r0, #3\n+\tadds\tr6, r1, #3\n \tmovs\tr4, r5\n-\tadds\tr6, r6, #2\n+\tadds\tr2, r0, #3\n \tmovs\tr4, r5\n-\tadd\tlr, r0\n+\tadd\tlr, r1\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/readpool.H:218\n \tmov\tr1, r6\n \tmov\tr0, r5\n ./src/mira/skim.C:888\n@@ -570983,99 +570983,99 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr4, r5, r1\n+\tadds\tr0, r7, r1\n \tmovs\tr4, r5\n-\tadds\tr6, r3, r1\n+\tadds\tr2, r5, r1\n \tmovs\tr4, r5\n-\tands\tr4, r5\n+\tands\tr4, r6\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #520]\t@ 0x208\n+\tldr\tr5, [sp, #568]\t@ 0x238\n \tmovs\tr4, r5\n \tlsrs\tr0, r7, #5\n \tmovs\tr0, r0\n-\tcbz\tr6, 128862 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x846ca>\n+\tcbz\tr6, 128864 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x846cc>\n \tmovs\tr4, r5\n-\tlsrs\tr2, r5, #24\n+\tlsrs\tr6, r6, #24\n \tmovs\tr4, r5\n-\tsvc\t124\t@ 0x7c\n+\tsvc\t132\t@ 0x84\n \tmovs\tr6, r5\n-\tldrsh\tr2, [r2, r6]\n+\tldrsh\tr2, [r3, r6]\n \tmovs\tr5, r5\n-\tldrsh\tr0, [r2, r6]\n+\tldrsh\tr0, [r3, r6]\n \tmovs\tr5, r5\n-\tldrsh\tr6, [r1, r6]\n+\tldrsh\tr6, [r2, r6]\n \tmovs\tr5, r5\n-\tldrsh\tr0, [r3, r4]\n+\tldrsh\tr0, [r4, r4]\n \tmovs\tr5, r5\n-\tldrsh\tr2, [r7, r3]\n+\tldrsh\tr2, [r0, r4]\n \tmovs\tr5, r5\n-\tldrsh\tr6, [r3, r3]\n+\tldrsh\tr6, [r4, r3]\n \tmovs\tr5, r5\n-\tsxth\tr6, r4\n+\tsxth\tr6, r5\n \tmovs\tr4, r5\n \tldr\tr7, [pc, #912]\t@ (128bd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84a3c>)\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr2, r4, #20\n+\tasrs\tr6, r5, #20\n \tmovs\tr4, r5\n-\tasrs\tr4, r3, #20\n+\tasrs\tr0, r5, #20\n \tmovs\tr4, r5\n-\tcmp\tr3, #90\t@ 0x5a\n+\tcmp\tr3, #98\t@ 0x62\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #576\t@ 0x240\n+\tadd\tr7, sp, #608\t@ 0x260\n \tmovs\tr4, r5\n-\tbcs.n\t128888 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x846f0>\n+\tbcs.n\t128898 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84700>\n \tmovs\tr6, r5\n-\tb.n\t128880 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x846e8>\n+\tb.n\t128890 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x846f8>\n \tmovs\tr6, r5\n-\tb.n\t128e68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84cd0>\n+\tb.n\t128e78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84ce0>\n \tmovs\tr6, r5\n-\tbne.n\t1287f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84658>\n+\tbne.n\t128800 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84668>\n \tmovs\tr6, r5\n-\tsvc\t188\t@ 0xbc\n+\tsvc\t196\t@ 0xc4\n \tmovs\tr6, r5\n-\tb.n\t128dd0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84c38>\n+\tb.n\t128de0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84c48>\n \tmovs\tr6, r5\n-\tbne.n\t1288f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8475c>\n+\tbne.n\t128904 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8476c>\n \tmovs\tr6, r5\n-\tsvc\t56\t@ 0x38\n+\tsvc\t64\t@ 0x40\n \tmovs\tr6, r5\n-\tb.n\t128cd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84b3c>\n+\tb.n\t128ce4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84b4c>\n \tmovs\tr6, r5\n-\tbeq.n\t12885c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x846c4>\n+\tbeq.n\t12886c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x846d4>\n \tmovs\tr6, r5\n-\tudf\t#230\t@ 0xe6\n+\tudf\t#238\t@ 0xee\n \tmovs\tr6, r5\n-\tb.n\t128c3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84aa4>\n+\tb.n\t128c4c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84ab4>\n \tmovs\tr6, r5\n-\tadd\tr5, sp, #904\t@ 0x388\n+\tadd\tr5, sp, #936\t@ 0x3a8\n \tmovs\tr4, r5\n-\tudf\t#158\t@ 0x9e\n+\tudf\t#166\t@ 0xa6\n \tmovs\tr6, r5\n-\tb.n\t128bcc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84a34>\n+\tb.n\t128bdc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84a44>\n \tmovs\tr6, r5\n-\tldr\tr2, [r2, #28]\n+\tldr\tr6, [r3, #28]\n \tmovs\tr4, r5\n-\tadd\tr3, sp, #976\t@ 0x3d0\n+\tadd\tr3, sp, #1008\t@ 0x3f0\n \tmovs\tr4, r5\n-\tadd\tr3, sp, #112\t@ 0x70\n+\tadd\tr3, sp, #144\t@ 0x90\n \tmovs\tr4, r5\n Skim >::purgeMatchFileIfNeeded(signed char):\n ./src/mira/skim.C:664\n \tldr\tr2, [pc, #432]\t@ (128a58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x848c0>)\n \tldr\tr3, [pc, #436]\t@ (128a5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x848c4>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -571301,15 +571301,15 @@\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmov\tlr, r4\n \tmovs\tr0, r7\n \tmov\tr2, sl\n \tmovs\tr0, r7\n-\tadd\tr7, pc, #696\t@ (adr r7, 128d24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84b8c>)\n+\tadd\tr7, pc, #728\t@ (adr r7, 128d44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x84bac>)\n \tmovs\tr4, r5\n \tlsrs\tr4, r1, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -573047,91 +573047,91 @@\n \t...\n \tadd\tr8, fp\n \tmovs\tr0, r7\n \tadd\tsl, r9\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #424\t@ (adr r5, 129900 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85768>)\n+\tadd\tr5, pc, #456\t@ (adr r5, 129920 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85788>)\n \tmovs\tr4, r5\n-\tadd\tr5, pc, #80\t@ (adr r5, 1297ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85614>)\n+\tadd\tr5, pc, #112\t@ (adr r5, 1297cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85634>)\n \tmovs\tr4, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #760\t@ (adr r4, 129a5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x858c4>)\n+\tadd\tr4, pc, #792\t@ (adr r4, 129a7c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x858e4>)\n \tmovs\tr4, r5\n-\tadd\tr4, pc, #88\t@ (adr r4, 1297c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85628>)\n+\tadd\tr4, pc, #120\t@ (adr r4, 1297e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85648>)\n \tmovs\tr4, r5\n-\tadd\tr3, pc, #848\t@ (adr r3, 129abc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85924>)\n+\tadd\tr3, pc, #880\t@ (adr r3, 129adc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85944>)\n \tmovs\tr4, r5\n-\tadd\tr3, pc, #424\t@ (adr r3, 129918 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85780>)\n+\tadd\tr3, pc, #456\t@ (adr r3, 129938 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x857a0>)\n \tmovs\tr4, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr0, r4, #21\n+\tlsls\tr4, r5, #21\n \tmovs\tr4, r5\n-\tlsls\tr2, r3, #21\n+\tlsls\tr6, r4, #21\n \tmovs\tr4, r5\n-\tsubs\tr0, r3, r6\n+\tsubs\tr0, r4, r6\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #864]\t@ 0x360\n+\tldr\tr5, [sp, #896]\t@ 0x380\n \tmovs\tr4, r5\n-\tstmia\tr0!, {r2, r3, r5, r6}\n+\tstmia\tr0!, {r2, r4, r5, r6}\n \tmovs\tr6, r5\n-\tldmia\tr6, {r1, r2, r5, r6}\n+\tldmia\tr6, {r1, r2, r3, r5, r6}\n \tmovs\tr6, r5\n-\tbne.n\t129860 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x856c8>\n+\tbne.n\t129870 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x856d8>\n \tmovs\tr6, r5\n-\tstmia\tr0!, {r1, r3, r4}\n+\tstmia\tr0!, {r1, r5}\n \tmovs\tr6, r5\n-\tldmia\tr6!, {r2, r4}\n+\tldmia\tr6!, {r2, r3, r4}\n \tmovs\tr6, r5\n-\tbne.n\t1297c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85630>\n+\tbne.n\t1297d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x85640>\n \tmovs\tr6, r5\n-\titet\tls\n+\tittt\tls\n \tmovls\tr6, r5\n-\tldmiahi\tr5!, {r1, r4, r7}\n+\tldmials\tr5!, {r1, r3, r4, r7}\n \tmovls\tr6, r5\n-\tbeq.n\t1296d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8553c>\n+\tbeq.n\t1296e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8554c>\n \tmovs\tr6, r5\n-\titet\tmi\n-\tmovmi\tr6, r5\n-\tldmiapl\tr5!, {r1, r2, r6}\n+\titee\tpl\n+\tmovpl\tr6, r5\n+\tldmiami\tr5!, {r1, r2, r3, r6}\n \tmovmi\tr6, r5\n-\tbeq.n\t129848 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x856b0>\n+\tbeq.n\t129858 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x856c0>\n \tmovs\tr6, r5\n-\tldr\tr4, [sp, #280]\t@ 0x118\n+\tldr\tr4, [sp, #312]\t@ 0x138\n \tmovs\tr4, r5\n-\tldmia\tr5!, {r2}\n+\tldmia\tr5!, {r2, r3}\n \tmovs\tr6, r5\n-\tbeq.n\t1297e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8564c>\n+\tbeq.n\t1297f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8565c>\n \tmovs\tr6, r5\n-\tvhadd.u\td16, d14, d27\n-\tvhadd.u\td16, d10, d27\n-\tasrs\tr2, r7, #22\n+\tvaddl.u8\tq0, d10, d27\n+\tvaddl.u8\tq0, d6, d27\n+\tasrs\tr2, r0, #23\n \tmovs\tr6, r5\n+\tcdp2\t0, 8, cr0, cr6, cr11, {1}\n \tcdp2\t0, 7, cr0, cr10, cr11, {1}\n-\tcdp2\t0, 6, cr0, cr14, cr11, {1}\n-\tmovs\tr6, #62\t@ 0x3e\n+\tmovs\tr6, #70\t@ 0x46\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/readpool.H:218\n \tmov\tr1, r6\n \tmov\tr0, r5\n ./src/mira/skim.C:888\n@@ -575006,94 +575006,94 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa24002b\n-\t\t\t@ instruction: 0xfa16002b\n-\tmovs\tr1, #228\t@ 0xe4\n+\t\t\t@ instruction: 0xfa30002b\n+\t\t\t@ instruction: 0xfa22002b\n+\tmovs\tr1, #236\t@ 0xec\n \tmovs\tr6, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrb\tr2, [r7, #28]\n+\tldrb\tr6, [r0, #29]\n \tmovs\tr4, r5\n \tlsrs\tr4, r5, #10\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #856]\t@ 0x358\n+\tstr\tr4, [sp, #888]\t@ 0x378\n \tmovs\tr4, r5\n-\tvaddl.s32\tq8, d2, d27\n-\tstmia\tr1!, {r2, r4, r5}\n+\tvaddl.s32\tq8, d14, d27\n+\tstmia\tr1!, {r2, r3, r4, r5}\n \tmovs\tr6, r5\n-\tadcs\tr2, r1\n+\tadcs\tr2, r2\n \tmovs\tr5, r5\n-\tadcs\tr0, r1\n+\tadcs\tr0, r2\n \tmovs\tr5, r5\n-\tadcs\tr6, r0\n+\tadcs\tr6, r1\n \tmovs\tr5, r5\n-\tlsrs\tr0, r2\n+\tlsrs\tr0, r3\n \tmovs\tr5, r5\n-\tlsls\tr2, r6\n+\tlsls\tr2, r7\n \tmovs\tr5, r5\n-\tlsls\tr6, r2\n+\tlsls\tr6, r3\n \tmovs\tr5, r5\n-\tstr\tr3, [sp, #888]\t@ 0x378\n+\tstr\tr3, [sp, #920]\t@ 0x398\n \tmovs\tr4, r5\n \tadds\tr1, #156\t@ 0x9c\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf6da002b\n-\t\t\t@ instruction: 0xf6d4002b\n-\tlsrs\tr2, r2, #20\n+\t\t\t@ instruction: 0xf6e6002b\n+\t\t\t@ instruction: 0xf6e0002b\n+\tlsrs\tr2, r3, #20\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #288]\t@ 0x120\n+\tstr\tr1, [sp, #320]\t@ 0x140\n \tmovs\tr4, r5\n-\tcbz\tr4, 12a71a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86582>\n+\tcbz\tr4, 12a71c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86584>\n \tmovs\tr6, r5\n-\tstmia\tr1!, {r1, r2, r6, r7}\n+\tstmia\tr1!, {r1, r2, r3, r6, r7}\n \tmovs\tr6, r5\n-\tstmia\tr4!, {r3, r4, r5, r7}\n+\tstmia\tr4!, {r6, r7}\n \tmovs\tr6, r5\n-\tcbz\tr2, 12a712 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8657a>\n+\tcbz\tr2, 12a714 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8657c>\n \tmovs\tr6, r5\n-\tstmia\tr1!, {r2, r4, r5, r6}\n+\tstmia\tr1!, {r2, r3, r4, r5, r6}\n \tmovs\tr6, r5\n-\tstmia\tr4!, {r1, r2, r5, r6}\n+\tstmia\tr4!, {r1, r2, r3, r5, r6}\n \tmovs\tr6, r5\n-\tuxtb\tr6, r6\n+\tuxtb\tr6, r7\n \tmovs\tr6, r5\n-\tstmia\tr0!, {r4, r5, r6, r7}\n+\tstmia\tr0!, {r3, r4, r5, r6, r7}\n \tmovs\tr6, r5\n-\tstmia\tr3!, {r1, r5, r6, r7}\n+\tstmia\tr3!, {r1, r3, r5, r6, r7}\n \tmovs\tr6, r5\n-\tuxth\tr4, r4\n+\tuxth\tr4, r5\n \tmovs\tr6, r5\n-\tstmia\tr0!, {r1, r2, r3, r4, r7}\n+\tstmia\tr0!, {r1, r2, r5, r7}\n \tmovs\tr6, r5\n-\tstmia\tr3!, {r4, r7}\n+\tstmia\tr3!, {r3, r4, r7}\n \tmovs\tr6, r5\n-\tldrh\tr2, [r3, #60]\t@ 0x3c\n+\tldrh\tr2, [r4, #60]\t@ 0x3c\n \tmovs\tr4, r5\n-\tstmia\tr0!, {r1, r2, r4, r6}\n+\tstmia\tr0!, {r1, r2, r3, r4, r6}\n \tmovs\tr6, r5\n-\tstmia\tr3!, {r1, r4, r6}\n+\tstmia\tr3!, {r1, r3, r4, r6}\n \tmovs\tr6, r5\n-\tldr\tr3, [pc, #552]\t@ (12a90c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86774>)\n+\tldr\tr3, [pc, #600]\t@ (12a93c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x867a4>)\n \tmovs\tr4, r5\n-\tldrh\tr4, [r5, #44]\t@ 0x2c\n+\tldrh\tr4, [r6, #44]\t@ 0x2c\n \tmovs\tr4, r5\n-\tldrh\tr4, [r2, #38]\t@ 0x26\n+\tldrh\tr4, [r3, #38]\t@ 0x26\n \tmovs\tr4, r5\n Skim >::purgeMatchFileIfNeeded(signed char):\n ./src/mira/skim.C:664\n \tldr\tr2, [pc, #432]\t@ (12a8a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86708>)\n \tldr\tr3, [pc, #436]\t@ (12a8a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8670c>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -575320,15 +575320,15 @@\n \tmovs\tr0, r7\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr0, #94\t@ 0x5e\n \tmovs\tr0, r7\n \tcmp\tr0, #10\n \tmovs\tr0, r7\n-\tldrh\tr4, [r4, #10]\n+\tldrh\tr4, [r5, #10]\n \tmovs\tr4, r5\n \tlsls\tr4, r7, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -576029,32 +576029,32 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrd\tr0, r0, [r4, #172]!\t@ 0xac\n-\tldrd\tr0, r0, [r0, #172]!\t@ 0xac\n-\tmovs\tr0, r6\n+\tand.w\tr0, r0, fp, asr #32\n+\tldrd\tr0, r0, [ip, #172]!\t@ 0xac\n+\tmovs\tr0, r7\n \tmovs\tr6, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia.w\tr6!, {r0, r1, r3, r5}\n-\tldmia.w\tr2!, {r0, r1, r3, r5}\n-\tcdp2\t0, 15, cr0, cr2, cr13, {1}\n-\tb.n\t12ad70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86bd8>\n+\t\t\t@ instruction: 0xe8c2002b\n+\tldmia.w\tlr!, {r0, r1, r3, r5}\n+\tcdp2\t0, 15, cr0, cr10, cr13, {1}\n+\tb.n\t12ad88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86bf0>\n \tmovs\tr3, r5\n-\tb.n\t12ad6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86bd4>\n+\tb.n\t12ad84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86bec>\n \tmovs\tr3, r5\n-\tstc2l\t0, cr0, [r6, #180]\t@ 0xb4\n+\tstc2l\t0, cr0, [lr, #180]\t@ 0xb4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #104\t@ 0x68\n /usr/include/c++/10/ostream:391\n \tldr\tr7, [pc, #508]\t@ (12b068 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86ed0>)\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, sl\n \tadd.w\tr8, sp, #40\t@ 0x28\n@@ -576321,19 +576321,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t12ac70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86ad8>\n+\tb.n\t12ac88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86af0>\n \tmovs\tr3, r5\n-\tb.n\t12ac6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86ad4>\n+\tb.n\t12ac84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x86aec>\n \tmovs\tr3, r5\n-\tldc2\t0, cr0, [r4], #-180\t@ 0xffffff4c\n+\tldc2\t0, cr0, [ip], #-180\t@ 0xffffff4c\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tsubs\tr4, r1, #7\n@@ -577009,35 +577009,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t12ba70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x878d8>\n+\tb.n\t12ba88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x878f0>\n \tmovs\tr3, r5\n-\tb.n\t12ba6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x878d4>\n+\tb.n\t12ba84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x878ec>\n \tmovs\tr3, r5\n-\tstrb.w\tr0, [r0, #45]\t@ 0x2d\n+\tstrb.w\tr0, [r8, #45]\t@ 0x2d\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t12b80c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87674>\n+\tb.n\t12b824 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8768c>\n \tmovs\tr3, r5\n-\tb.n\t12b808 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87670>\n+\tb.n\t12b820 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87688>\n \tmovs\tr3, r5\n-\t\t\t@ instruction: 0xf742002d\n-\tsvc\t218\t@ 0xda\n+\t\t\t@ instruction: 0xf74a002d\n+\tsvc\t230\t@ 0xe6\n \tmovs\tr3, r5\n-\tsvc\t214\t@ 0xd6\n+\tsvc\t226\t@ 0xe2\n \tmovs\tr3, r5\n-\t\t\t@ instruction: 0xf616002d\n+\t\t\t@ instruction: 0xf61e002d\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #104\t@ 0x68\n /usr/include/c++/10/ostream:391\n \tldr\tr7, [pc, #508]\t@ (12b818 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87680>)\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, sl\n \tadd.w\tr8, sp, #40\t@ 0x28\n@@ -577304,19 +577304,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tudf\t#72\t@ 0x48\n+\tudf\t#84\t@ 0x54\n \tmovs\tr3, r5\n-\tudf\t#68\t@ 0x44\n+\tudf\t#80\t@ 0x50\n \tmovs\tr3, r5\n-\teor.w\tr0, r4, #11337728\t@ 0xad0000\n+\teor.w\tr0, ip, #11337728\t@ 0xad0000\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tadds\tr4, r3, r0\n@@ -577992,35 +577992,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbge.n\t12bcc0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87b28>\n+\tbge.n\t12bcd8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87b40>\n \tmovs\tr3, r5\n-\tbge.n\t12bcbc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87b24>\n+\tbge.n\t12bcd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87b3c>\n \tmovs\tr3, r5\n-\t\t\t@ instruction: 0xf0d0002d\n+\t\t\t@ instruction: 0xf0d8002d\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbls.n\t12be5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87cc4>\n+\tbls.n\t12be74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87cdc>\n \tmovs\tr3, r5\n-\tbls.n\t12be58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87cc0>\n+\tbls.n\t12be70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87cd8>\n \tmovs\tr3, r5\n-\tvaddl.s16\tq0, d2, d29\n-\tbhi.n\t12be10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87c78>\n+\tvaddl.s16\tq0, d10, d29\n+\tbhi.n\t12be28 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87c90>\n \tmovs\tr3, r5\n-\tbhi.n\t12be0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87c74>\n+\tbhi.n\t12be24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87c8c>\n \tmovs\tr3, r5\n-\tcdp\t0, 6, cr0, cr6, cr13, {1}\n+\tcdp\t0, 6, cr0, cr14, cr13, {1}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #104\t@ 0x68\n /usr/include/c++/10/ostream:391\n \tldr\tr7, [pc, #508]\t@ (12bfc8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87e30>)\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, sl\n \tadd.w\tr8, sp, #40\t@ 0x28\n@@ -578287,19 +578287,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbvs.n\t12bf10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87d78>\n+\tbvs.n\t12bf28 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87d90>\n \tmovs\tr3, r5\n-\tbvs.n\t12bf0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87d74>\n+\tbvs.n\t12bf24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x87d8c>\n \tmovs\tr3, r5\n-\tldcl\t0, cr0, [r4], {45}\t@ 0x2d\n+\tldcl\t0, cr0, [ip], {45}\t@ 0x2d\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tasrs\tr4, r5, #1\n@@ -578975,36 +578975,36 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbcs.n\t12c510 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88378>\n+\tbcs.n\t12c528 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88390>\n \tmovs\tr3, r5\n-\tbcs.n\t12c50c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88374>\n+\tbcs.n\t12c524 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8838c>\n \tmovs\tr3, r5\n-\tstmdb\tr0!, {r0, r2, r3, r5}\n+\tstmdb\tr8!, {r0, r2, r3, r5}\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbne.n\t12c4ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88314>\n+\tbne.n\t12c4c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8832c>\n \tmovs\tr3, r5\n-\tbne.n\t12c4a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88310>\n+\tbne.n\t12c4c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88328>\n \tmovs\tr3, r5\n-\tb.n\t12c52c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88394>\n+\tb.n\t12c53c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x883a4>\n \tmovs\tr5, r5\n-\tbeq.n\t12c660 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x884c8>\n+\tbeq.n\t12c478 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x882e0>\n \tmovs\tr3, r5\n-\tbeq.n\t12c65c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x884c4>\n+\tbeq.n\t12c474 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x882dc>\n \tmovs\tr3, r5\n-\tb.n\t12c2e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88148>\n+\tb.n\t12c2f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88158>\n \tmovs\tr5, r5\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #104\t@ 0x68\n /usr/include/c++/10/ostream:391\n \tldr\tr7, [pc, #508]\t@ (12c778 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x885e0>)\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, sl\n@@ -579272,19 +579272,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr6, {r3, r5, r6, r7}\n+\tldmia\tr6, {r2, r4, r5, r6, r7}\n \tmovs\tr3, r5\n-\tldmia\tr6, {r2, r5, r6, r7}\n+\tldmia\tr6, {r4, r5, r6, r7}\n \tmovs\tr3, r5\n-\tb.n\t12c1e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88048>\n+\tb.n\t12c1f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88058>\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -580244,33 +580244,33 @@\n \tmovs\tr0, r0\n \tlsls\tr2, r1, #30\n \tmovs\tr0, r7\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #4\n \tmovs\tr0, r0\n-\tldmia\tr4, {r1, r3, r4, r5, r6}\n+\tldmia\tr4!, {r1, r2, r7}\n \tmovs\tr3, r5\n-\tldmia\tr4, {r2, r4, r5, r6}\n+\tldmia\tr4!, {r7}\n \tmovs\tr3, r5\n-\tb.n\t12d46c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x892d4>\n+\tb.n\t12d47c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x892e4>\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsls\tr6, r0, #21\n \tmovs\tr0, r7\n-\tldmia\tr2!, {r1, r5, r7}\n+\tldmia\tr2, {r1, r2, r3, r5, r7}\n \tmovs\tr3, r5\n-\tldmia\tr2, {r2, r3, r4, r7}\n+\tldmia\tr2!, {r3, r5, r7}\n \tmovs\tr3, r5\n-\tb.n\t12d0d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88f40>\n+\tb.n\t12d0e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x88f50>\n \tmovs\tr5, r5\n Skim >::fillTagMaskVector(unsigned int, std::vector >&):\n ./src/mira/skim.C:3174\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n \tldr.w\tr2, [pc, #1844]\t@ 12d660 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x894c8>\n \tldr.w\tr3, [pc, #1844]\t@ 12d664 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x894cc>\n@@ -581220,32 +581220,32 @@\n \tmovs\tr0, r0\n \tmovs\tr2, r2\n \tmovs\tr0, r7\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #4\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r1}\n+\tstmia\tr5!, {r1, r2, r3}\n \tmovs\tr3, r5\n-\tstmia\tr4!, {r2, r3, r4, r5, r6, r7}\n+\tstmia\tr5!, {r3}\n \tmovs\tr3, r5\n-\tblt.n\t12d6f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8955c>\n+\tblt.n\t12d704 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8956c>\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tstc2l\t0, cr0, [lr, #220]\t@ 0xdc\n-\tstmia\tr3!, {r1, r3, r5}\n+\tstmia\tr3!, {r1, r2, r4, r5}\n \tmovs\tr3, r5\n-\tstmia\tr3!, {r2, r5}\n+\tstmia\tr3!, {r4, r5}\n \tmovs\tr3, r5\n-\tbls.n\t12d760 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x895c8>\n+\tbls.n\t12d770 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x895d8>\n \tmovs\tr5, r5\n Skim::fillTagMaskVector(unsigned int, std::vector >&):\n ./src/mira/skim.C:3174\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n \tldr.w\tr2, [pc, #1844]\t@ 12ddd8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89c40>\n \tldr.w\tr3, [pc, #1844]\t@ 12dddc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89c44>\n@@ -582193,32 +582193,32 @@\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb.w\tr0, [sl, #55]\t@ 0x37\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #4\n \tmovs\tr0, r0\n-\tpop\t{r1, r3, r7, pc}\n+\tpop\t{r1, r2, r4, r7, pc}\n \tmovs\tr3, r5\n-\tpop\t{r2, r7, pc}\n+\tpop\t{r4, r7, pc}\n \tmovs\tr3, r5\n-\tbcc.n\t12dd7c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89be4>\n+\tbcc.n\t12dd8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89bf4>\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf6560037\n-\tcbnz\tr2, 12de78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89ce0>\n+\tcbnz\tr6, 12de7a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89ce2>\n \tmovs\tr3, r5\n-\tcbnz\tr4, 12de7a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89ce2>\n+\tcbnz\tr0, 12de7e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89ce6>\n \tmovs\tr3, r5\n-\tbne.n\t12dde8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89c50>\n+\tbne.n\t12ddf8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x89c60>\n \tmovs\tr5, r5\n Skim >::fillTagMaskVector(unsigned int, std::vector >&):\n ./src/mira/skim.C:3174\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n \tldr.w\tr2, [pc, #1844]\t@ 12e550 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a3b8>\n \tldr.w\tr3, [pc, #1844]\t@ 12e554 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a3bc>\n@@ -583166,32 +583166,32 @@\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf1220037\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #4\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb612\n+\t\t\t@ instruction: 0xb61e\n \tmovs\tr3, r5\n-\t\t\t@ instruction: 0xb60c\n+\tsetpan\t#1\n \tmovs\tr3, r5\n-\tldmia\tr4!, {r1, r3, r6}\n+\tldmia\tr4, {r1, r4, r6}\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tmrc\t0, 6, r0, cr14, cr7, {1}\n-\tpush\t{r1, r3, r4, r5}\n+\tpush\t{r1, r2, r6}\n \tmovs\tr3, r5\n-\tpush\t{r2, r4, r5}\n+\tpush\t{r6}\n \tmovs\tr3, r5\n-\tldmia\tr2!, {r1, r4, r5, r6}\n+\tldmia\tr2!, {r1, r3, r4, r5, r6}\n \tmovs\tr5, r5\n boost::detail::thread_data, boost::_bi::list1 > > >::run():\n /usr/include/boost/thread/detail/thread.hpp:118\n \tldr\tr2, [pc, #108]\t@ (12e5fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a464>)\n \tldr\tr3, [pc, #112]\t@ (12e600 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a468>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, lr}\n@@ -583255,15 +583255,15 @@\n \tblx\tb454 \n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldrd\tr0, r0, [r0, #220]\t@ 0xdc\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrd\tr0, r0, [r2, #220]\t@ 0xdc\n \t\t\t@ instruction: 0xe9ae0037\n-\tldr\tr3, [pc, #496]\t@ (12e800 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a668>)\n+\tldr\tr3, [pc, #528]\t@ (12e820 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a688>)\n \tmovs\tr4, r5\n \tlsrs\tr0, r3, #4\n \tmovs\tr0, r0\n std::vector::threadworkercontrol_t, std::allocator::threadworkercontrol_t> >::_M_fill_insert(__gnu_cxx::__normal_iterator::threadworkercontrol_t*, std::vector::threadworkercontrol_t, std::allocator::threadworkercontrol_t> > >, unsigned int, Skim::threadworkercontrol_t const&):\n /usr/include/c++/10/bits/vector.tcc:509\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r1\n@@ -583864,15 +583864,15 @@\n \tadd\tr0, pc\n \tblx\tb6dc \n \tldmdb\tip!, {r0, r1, r2, r4, r5}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t12eb24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8a98c>\n \tmovs\tr7, r6\n-\tadd\tr2, sp, #120\t@ 0x78\n+\tadd\tr2, sp, #168\t@ 0xa8\n \tmovs\tr3, r5\n boost::thread::thread, boost::_bi::list1 > >&>(boost::_bi::bind_t, boost::_bi::list1 > >&):\n /usr/include/boost/thread/detail/thread.hpp:264\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr5, r0\n \tldr\tr2, [pc, #964]\t@ (12ef30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8ad98>)\n \tsub\tsp, #76\t@ 0x4c\n@@ -584412,19 +584412,19 @@\n \tmovs\tr0, r0\n \tlsls\tr4, r4, #25\n \tmovs\tr0, r0\n \tb.n\t12f49c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b304>\n \tmovs\tr7, r6\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tadds\tr0, #124\t@ 0x7c\n+\tadds\tr0, #136\t@ 0x88\n \tmovs\tr4, r5\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #896\t@ (adr r5, 12f2dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b144>)\n+\tadd\tr5, pc, #944\t@ (adr r5, 12f30c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b174>)\n \tmovs\tr3, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim::startMultiThreading(signed char, unsigned int, unsigned int, unsigned int, unsigned int, boost::function, boost::function):\n ./src/mira/skim.C:1490\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n@@ -585284,43 +585284,43 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsvc\t210\t@ 0xd2\n \tmovs\tr7, r6\n \tbgt.n\t12f4f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b35c>\n \tmovs\tr7, r6\n-\tadds\tr6, r7, r0\n+\tadds\tr2, r1, r1\n \tmovs\tr4, r5\n-\tasrs\tr4, r5, #29\n+\tasrs\tr0, r7, #29\n \tmovs\tr4, r5\n-\tlsls\tr6, r2, #8\n+\tlsls\tr2, r4, #8\n \tmovs\tr4, r5\n-\tasrs\tr4, r0, #9\n+\tasrs\tr0, r2, #9\n \tmovs\tr4, r5\n-\tstrh\tr6, [r0, #26]\n+\tstrh\tr2, [r2, #26]\n \tmovs\tr3, r5\n-\tasrs\tr4, r3, #9\n+\tasrs\tr0, r5, #9\n \tmovs\tr4, r5\n-\tsubs\tr4, #170\t@ 0xaa\n+\tsubs\tr4, #178\t@ 0xb2\n \tmovs\tr4, r5\n-\tasrs\tr4, r4, #29\n+\tasrs\tr0, r6, #29\n \tmovs\tr4, r5\n-\tadds\tr6, r5, r0\n+\tadds\tr2, r7, r0\n \tmovs\tr4, r5\n-\tasrs\tr4, r1, #26\n+\tasrs\tr0, r3, #26\n \tmovs\tr4, r5\n-\tasrs\tr2, r4, #27\n+\tasrs\tr6, r5, #27\n \tmovs\tr4, r5\n-\tasrs\tr0, r2, #23\n+\tasrs\tr4, r3, #23\n \tmovs\tr4, r5\n-\tsubs\tr4, #100\t@ 0x64\n+\tsubs\tr4, #108\t@ 0x6c\n \tmovs\tr4, r5\n \tlsrs\tr0, r3, #4\n \tmovs\tr0, r0\n-\tasrs\tr6, r3, #19\n+\tasrs\tr2, r5, #19\n \tmovs\tr4, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim::findAdaptorRightClip(ReadPool&, std::vector >&, signed char, unsigned int, unsigned int):\n ./src/mira/skim.C:3377\n@@ -586032,15 +586032,15 @@\n \tmovw\tr4, #65408\t@ 0xff80\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t12fb5e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b9c6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (12fb84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8b9ec>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr1, [sp, #840]\t@ 0x348\n+\tldr\tr1, [sp, #888]\t@ 0x378\n \tmovs\tr3, r5\n std::vector >, std::allocator > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t12fd26 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8bb8e>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -586955,15 +586955,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t13027a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c0e2>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (130430 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8c298>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstr\tr1, [sp, #160]\t@ 0xa0\n+\tstr\tr1, [sp, #208]\t@ 0xd0\n \tmovs\tr3, r5\n Skim::cfhThreadsDataInit(unsigned int):\n ./src/mira/skim.C:1572\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr2, r1\n \tmov\tr9, r0\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -588311,20 +588311,20 @@\n \tvpop\t{d8-d9}\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tnop.w\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\t\t\t@ instruction: 0xf758002c\n-\tadd\tr2, sp, #280\t@ 0x118\n+\t\t\t@ instruction: 0xf760002c\n+\tadd\tr2, sp, #312\t@ 0x138\n \tmovs\tr5, r5\n-\tb.n\t1311d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d03c>\n+\tb.n\t1311ec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d054>\n \tmovs\tr3, r5\n-\tb.n\t13111c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cf84>\n+\tb.n\t131134 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cf9c>\n \tmovs\tr3, r5\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned char const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldrd\tr9, r7, [r0]\n /usr/include/c++/10/bits/stl_vector.h:1758\n@@ -588424,15 +588424,15 @@\n \tcmp.w\tr9, #0\n \tbeq.n\t130eac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cd14>\n \tb.n\t130ec8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cd30>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (130ef8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8cd60>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldrb\tr2, [r6, r4]\n+\tldrb\tr6, [r7, r4]\n \tmovs\tr3, r5\n Skim >::updateCriterionLevels(signed char, unsigned int, Skim >::cfh_threaddata_t&):\n ./src/mira/skim.C:2111\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n \tldr.w\tr2, [pc, #1540]\t@ 131508 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8d370>\n \tsub\tsp, #356\t@ 0x164\n@@ -589246,19 +589246,19 @@\n \tmovs\tr0, r0\n \tstmia\tr0!, {r3, r4, r5}\n \tmovs\tr7, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tpop\t{r2}\n \tmovs\tr7, r6\n-\tstrh\tr6, [r0, #8]\n+\tstrh\tr2, [r2, #8]\n \tmovs\tr3, r5\n-\tstrh\tr2, [r0, #8]\n+\tstrh\tr6, [r1, #8]\n \tmovs\tr3, r5\n-\tstr\tr7, [sp, #264]\t@ 0x108\n+\tstr\tr7, [sp, #296]\t@ 0x128\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -590078,19 +590078,19 @@\n \tmovs\tr0, r0\n \trev\tr0, r0\n \tmovs\tr7, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tpush\t{r2, r3, r6, r7, lr}\n \tmovs\tr7, r6\n-\tldrb\tr6, [r1, #11]\n+\tldrb\tr2, [r3, #11]\n \tmovs\tr3, r5\n-\tldrb\tr2, [r1, #11]\n+\tldrb\tr6, [r2, #11]\n \tmovs\tr3, r5\n-\tstr\tr1, [sp, #40]\t@ 0x28\n+\tstr\tr1, [sp, #72]\t@ 0x48\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -590910,19 +590910,19 @@\n \tmovs\tr0, r0\n \tcbz\tr0, 1321f6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8e05e>\n \tmovs\tr7, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tadd\tr7, sp, #592\t@ 0x250\n \tmovs\tr7, r6\n-\tstrb\tr6, [r2, #18]\n+\tstrb\tr2, [r4, #18]\n \tmovs\tr3, r5\n-\tstrb\tr2, [r2, #18]\n+\tstrb\tr6, [r3, #18]\n \tmovs\tr3, r5\n-\tldrh\tr2, [r2, #22]\n+\tldrh\tr2, [r3, #22]\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -591742,19 +591742,19 @@\n \tmovs\tr0, r0\n \tadd\tr5, sp, #576\t@ 0x240\n \tmovs\tr7, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tadd\tr1, sp, #368\t@ 0x170\n \tmovs\tr7, r6\n-\tldr\tr6, [r3, #100]\t@ 0x64\n+\tldr\tr2, [r5, #100]\t@ 0x64\n \tmovs\tr3, r5\n-\tldr\tr2, [r3, #100]\t@ 0x64\n+\tldr\tr6, [r4, #100]\t@ 0x64\n \tmovs\tr3, r5\n-\tstrh\tr2, [r3, #36]\t@ 0x24\n+\tstrh\tr2, [r4, #36]\t@ 0x24\n \tmovs\tr5, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -592309,15 +592309,15 @@\n \tnop\n \tadd\tr7, pc, #464\t@ (adr r7, 132efc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8ed64>)\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr5, pc, #968\t@ (adr r5, 1330fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8ef64>)\n \tmovs\tr7, r6\n-\tldr\tr4, [r1, #4]\n+\tldr\tr0, [r3, #4]\n \tmovs\tr3, r5\n Skim::makeVHRAPArrayShortcuts(std::vector::vhrap_t, std::allocator::vhrap_t> >&, unsigned int):\n ./src/mira/skim.C:1203\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r0\n \tldr\tr0, [pc, #620]\t@ (132fac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8ee14>)\n \tldr\tr3, [pc, #620]\t@ (132fb0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8ee18>)\n@@ -593156,15 +593156,15 @@\n \tmovw\tr6, #65504\t@ 0xffe0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t133366 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8f1ce>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1334dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x8f344>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstr\tr2, [r7, #4]\n+\tstr\tr6, [r0, #8]\n \tmovs\tr3, r5\n Skim >::farcThreadsDataInit(unsigned int):\n ./src/mira/skim.C:3767\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr2, r1\n \tmov\tr9, r0\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -594195,15 +594195,15 @@\n \tblx\tb6dc \n \tstr\tr6, [sp, #800]\t@ 0x320\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr5, [sp, #440]\t@ 0x1b8\n \tmovs\tr7, r6\n-\tldrsb\tr2, [r5, r6]\n+\tldrsb\tr6, [r6, r6]\n \tmovs\tr3, r5\n Skim >::startMultiThreading(signed char, unsigned int, unsigned int, unsigned int, unsigned int, boost::function, boost::function):\n ./src/mira/skim.C:1490\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr.w\tr2, [pc, #1644]\t@ 13444c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x902b4>\n \tvpush\t{d8}\n@@ -595061,41 +595061,41 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr1, [sp, #360]\t@ 0x168\n \tmovs\tr7, r6\n \tldrh\tr0, [r2, #48]\t@ 0x30\n \tmovs\tr7, r6\n-\tldmia\tr1, {r1, r2, r6, r7}\n+\tldmia\tr1, {r1, r4, r6, r7}\n \tmovs\tr3, r5\n-\tldmia\tr0!, {r2, r4, r5, r6, r7}\n+\tldmia\tr1!, {}\n \tmovs\tr3, r5\n-\tcbz\tr6, 1344ce , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x90336>\n+\tcbz\tr2, 1344d2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9033a>\n \tmovs\tr3, r5\n-\tstmia\tr3!, {r2, r3, r6, r7}\n+\tstmia\tr3!, {r3, r4, r6, r7}\n \tmovs\tr3, r5\n-\tadds\tr4, #206\t@ 0xce\n+\tadds\tr4, #218\t@ 0xda\n \tmovs\tr3, r5\n-\tstmia\tr3!, {r2, r5, r6, r7}\n+\tstmia\tr3!, {r4, r5, r6, r7}\n \tmovs\tr3, r5\n-\tcdp\t0, 3, cr0, cr2, cr11, {1}\n-\tldmia\tr0!, {r2, r3, r5, r6, r7}\n+\tcdp\t0, 3, cr0, cr10, cr11, {1}\n+\tldmia\tr0!, {r3, r4, r5, r6, r7}\n \tmovs\tr3, r5\n-\tldmia\tr1, {r1, r2, r4, r5, r7}\n+\tldmia\tr1, {r1, r6, r7}\n \tmovs\tr3, r5\n-\tldmia\tr0!, {r2, r4}\n+\tldmia\tr0!, {r5}\n \tmovs\tr3, r5\n-\tldmia\tr0!, {r1, r3, r5, r6}\n+\tldmia\tr0!, {r1, r2, r4, r5, r6}\n \tmovs\tr3, r5\n-\tstmia\tr7!, {r3, r4, r6}\n+\tstmia\tr7!, {r2, r5, r6}\n \tmovs\tr3, r5\n-\tstcl\t0, cr0, [ip, #172]!\t@ 0xac\n+\tldcl\t0, cr0, [r4, #172]!\t@ 0xac\n \tlsrs\tr0, r3, #4\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r1, r2, r5, r6}\n+\tstmia\tr6!, {r1, r4, r5, r6}\n \tmovs\tr3, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::findAdaptorRightClip(ReadPool&, std::vector >&, signed char, unsigned int, unsigned int):\n ./src/mira/skim.C:3377\n@@ -595807,15 +595807,15 @@\n \tmovw\tr4, #65408\t@ 0xff80\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t1349d6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9083e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1349fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x90864>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr3, [pc, #360]\t@ (134b68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x909d0>)\n+\tldr\tr3, [pc, #408]\t@ (134b98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x90a00>)\n \tmovs\tr3, r5\n Skim >::cfhThreadsDataInit(unsigned int):\n ./src/mira/skim.C:1572\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr2, r1\n \tmov\tr9, r0\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -597659,15 +597659,15 @@\n \tnop\n \tldrb\tr4, [r3, #15]\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r3, #9]\n \tmovs\tr7, r6\n-\tsubs\tr4, #180\t@ 0xb4\n+\tsubs\tr4, #192\t@ 0xc0\n \tmovs\tr3, r5\n Skim >::makeVHRAPArrayShortcuts(std::vector >::vhrap_t, std::allocator >::vhrap_t> >&, unsigned int):\n ./src/mira/skim.C:1203\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr0, [pc, #636]\t@ (135b54 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x919bc>)\n \tldr\tr3, [pc, #636]\t@ (135b58 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x919c0>)\n@@ -598530,15 +598530,15 @@\n \tmovw\tr6, #65504\t@ 0xffe0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t135f16 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x91d7e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (13608c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x91ef4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadds\tr4, #202\t@ 0xca\n+\tadds\tr4, #214\t@ 0xd6\n \tmovs\tr3, r5\n Skim >::farcThreadsDataInit(unsigned int):\n ./src/mira/skim.C:3767\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr3, #43691\t@ 0xaaab\n@@ -599516,15 +599516,15 @@\n \tblx\tb6dc \n \tldr\tr4, [r0, #64]\t@ 0x40\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r5, #40]\t@ 0x28\n \tmovs\tr7, r6\n-\tcmp\tr4, #230\t@ 0xe6\n+\tcmp\tr4, #242\t@ 0xf2\n \tmovs\tr3, r5\n Skim >::startMultiThreading(signed char, unsigned int, unsigned int, unsigned int, unsigned int, boost::function, boost::function):\n ./src/mira/skim.C:1490\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr.w\tr2, [pc, #1644]\t@ 136f10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x92d78>\n \tvpush\t{d8}\n@@ -600382,43 +600382,43 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [r2, #104]\t@ 0x68\n \tmovs\tr7, r6\n \tstr\tr4, [r1, #52]\t@ 0x34\n \tmovs\tr7, r6\n-\tldr\tr7, [sp, #8]\n+\tldr\tr7, [sp, #56]\t@ 0x38\n \tmovs\tr3, r5\n-\tldr\tr6, [sp, #192]\t@ 0xc0\n+\tldr\tr6, [sp, #240]\t@ 0xf0\n \tmovs\tr3, r5\n-\tldrh\tr2, [r3, #6]\n+\tldrh\tr6, [r4, #6]\n \tmovs\tr3, r5\n-\tldr\tr1, [sp, #32]\n+\tldr\tr1, [sp, #80]\t@ 0x50\n \tmovs\tr3, r5\n-\tlsrs\tr2, r1, #8\n+\tlsrs\tr6, r2, #8\n \tmovs\tr3, r5\n-\tldr\tr1, [sp, #128]\t@ 0x80\n+\tldr\tr1, [sp, #176]\t@ 0xb0\n \tmovs\tr3, r5\n-\tstmia\tr3!, {r1, r2, r3, r5, r6}\n+\tstmia\tr3!, {r1, r2, r4, r5, r6}\n \tmovs\tr3, r5\n-\tldr\tr6, [sp, #160]\t@ 0xa0\n+\tldr\tr6, [sp, #208]\t@ 0xd0\n \tmovs\tr3, r5\n-\tldr\tr6, [sp, #968]\t@ 0x3c8\n+\tldr\tr6, [sp, #1016]\t@ 0x3f8\n \tmovs\tr3, r5\n-\tldr\tr5, [sp, #320]\t@ 0x140\n+\tldr\tr5, [sp, #368]\t@ 0x170\n \tmovs\tr3, r5\n-\tldr\tr5, [sp, #664]\t@ 0x298\n+\tldr\tr5, [sp, #712]\t@ 0x2c8\n \tmovs\tr3, r5\n-\tldr\tr4, [sp, #592]\t@ 0x250\n+\tldr\tr4, [sp, #640]\t@ 0x280\n \tmovs\tr3, r5\n-\tstmia\tr3!, {r3, r5}\n+\tstmia\tr3!, {r4, r5}\n \tmovs\tr3, r5\n \tlsrs\tr0, r3, #4\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #648]\t@ 0x288\n+\tldr\tr3, [sp, #696]\t@ 0x2b8\n \tmovs\tr3, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::findAdaptorRightClip(ReadPool&, std::vector >&, signed char, unsigned int, unsigned int):\n ./src/mira/skim.C:3377\n@@ -601130,15 +601130,15 @@\n \tmovw\tr4, #65408\t@ 0xff80\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t13749a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x93302>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1374c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x93328>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tmovs\tr0, #150\t@ 0x96\n+\tmovs\tr0, #162\t@ 0xa2\n \tmovs\tr3, r5\n Skim >::cfhThreadsDataInit(unsigned int):\n ./src/mira/skim.C:1572\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr2, r1\n \tmov\tr9, r0\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -602913,15 +602913,15 @@\n \tnop\n \tstr\tr0, [r7, r7]\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [r6, r1]\n \tmovs\tr7, r6\n-\tasrs\tr0, r2, #11\n+\tasrs\tr4, r3, #11\n \tmovs\tr3, r5\n Skim >::makeVHRAPArrayShortcuts(std::vector >::vhrap_t, std::allocator >::vhrap_t> >&, unsigned int):\n ./src/mira/skim.C:1203\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r0\n \tldr\tr0, [pc, #756]\t@ (1385b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x94418>)\n \tldr\tr3, [pc, #756]\t@ (1385b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9441c>)\n@@ -603856,15 +603856,15 @@\n \tmovw\tr6, #65504\t@ 0xffe0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t138972 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x947da>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (138ae8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x94950>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsrs\tr6, r5, #9\n+\tlsrs\tr2, r7, #9\n \tmovs\tr3, r5\n Skim >::farcThreadsDataInit(unsigned int):\n ./src/mira/skim.C:3767\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr2, r1\n \tmov\tr8, r0\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -604855,15 +604855,15 @@\n \tblx\tb6dc \n \tsbcs\tr0, r1\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tands\tr6, r5\n \tmovs\tr7, r6\n-\tlsls\tr2, r5, #9\n+\tlsls\tr6, r6, #9\n \tmovs\tr3, r5\n Skim >::startMultiThreading(signed char, unsigned int, unsigned int, unsigned int, unsigned int, boost::function, boost::function):\n ./src/mira/skim.C:1490\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr.w\tr2, [pc, #1644]\t@ 13998c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x957f4>\n \tvpush\t{d8}\n@@ -605721,43 +605721,43 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr4, #26\n \tmovs\tr7, r6\n \tsubs\tr0, #208\t@ 0xd0\n \tmovs\tr7, r6\n-\tstrb\tr6, [r0, #18]\n+\tstrb\tr2, [r2, #18]\n \tmovs\tr3, r5\n-\tstrb\tr4, [r6, #14]\n+\tstrb\tr0, [r0, #15]\n \tmovs\tr3, r5\n-\tldrsh\tr6, [r3, r1]\n+\tldrsh\tr2, [r5, r1]\n \tmovs\tr3, r5\n-\tldr\tr4, [r1, #104]\t@ 0x68\n+\tldr\tr0, [r3, #104]\t@ 0x68\n \tmovs\tr3, r5\n-\tsvc\t142\t@ 0x8e\n+\tsvc\t154\t@ 0x9a\n \tmovs\tr2, r5\n-\tldr\tr4, [r4, #104]\t@ 0x68\n+\tldr\tr0, [r6, #104]\t@ 0x68\n \tmovs\tr3, r5\n-\tldr\tr0, [sp, #968]\t@ 0x3c8\n+\tldr\tr0, [sp, #1000]\t@ 0x3e8\n \tmovs\tr3, r5\n-\tstrb\tr4, [r5, #14]\n+\tstrb\tr0, [r7, #14]\n \tmovs\tr3, r5\n-\tstrb\tr6, [r6, #17]\n+\tstrb\tr2, [r0, #18]\n \tmovs\tr3, r5\n-\tstrb\tr4, [r2, #11]\n+\tstrb\tr0, [r4, #11]\n \tmovs\tr3, r5\n-\tstrb\tr2, [r5, #12]\n+\tstrb\tr6, [r6, #12]\n \tmovs\tr3, r5\n-\tstrb\tr0, [r3, #8]\n+\tstrb\tr4, [r4, #8]\n \tmovs\tr3, r5\n-\tldr\tr0, [sp, #688]\t@ 0x2b0\n+\tldr\tr0, [sp, #720]\t@ 0x2d0\n \tmovs\tr3, r5\n \tlsrs\tr0, r3, #4\n \tmovs\tr0, r0\n-\tstrb\tr6, [r4, #4]\n+\tstrb\tr2, [r6, #4]\n \tmovs\tr3, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::findAdaptorRightClip(ReadPool&, std::vector >&, signed char, unsigned int, unsigned int):\n ./src/mira/skim.C:3377\n@@ -606469,15 +606469,15 @@\n \tmovw\tr4, #65408\t@ 0xff80\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t139f16 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x95d7e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (139f3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x95da4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\t\t\t@ instruction: 0xf61a002a\n+\t\t\t@ instruction: 0xf626002a\n Skim >::cfhThreadsDataInit(unsigned int):\n ./src/mira/skim.C:1572\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tmov\tr0, r1\n \tsub\tsp, #28\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -608278,15 +608278,15 @@\n \tnop\n \tmovs\tr6, #224\t@ 0xe0\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr5, #94\t@ 0x5e\n \tmovs\tr7, r6\n-\tb.n\t13ad3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x96ba4>\n+\tb.n\t13ad54 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x96bbc>\n \tmovs\tr2, r5\n Skim >::makeVHRAPArrayShortcuts(std::vector >::vhrap_t, std::allocator >::vhrap_t> >&, unsigned int):\n ./src/mira/skim.C:1203\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n \tldr\tr0, [pc, #828]\t@ (13b110 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x96f78>)\n \tldr\tr3, [pc, #828]\t@ (13b114 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x96f7c>)\n@@ -608819,15 +608819,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t13b1d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97038>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (13b1f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97058>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\trev\tr4, r7\n+\trev16\tr0, r1\n \tmovs\tr2, r5\n Skim >::init():\n ./src/mira/skim.C:104\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n \tldr\tr5, [pc, #652]\t@ (13b488 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x972f0>)\n \tldr\tr0, [pc, #656]\t@ (13b48c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x972f4>)\n@@ -609634,19 +609634,19 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr0, r3, r2\n \tmovs\tr7, r6\n \tadds\tr6, r6, r5\n \tmovs\tr7, r6\n-\tudf\t#22\n+\tudf\t#34\t@ 0x22\n \tmovs\tr2, r5\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tble.n\t13b818 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97680>\n+\tble.n\t13b830 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97698>\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim::init():\n ./src/mira/skim.C:104\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n@@ -610453,19 +610453,19 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #17\n \tmovs\tr7, r6\n \tasrs\tr6, r5, #12\n \tmovs\tr7, r6\n-\tbvc.n\t13be10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97c78>\n+\tbvc.n\t13be28 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97c90>\n \tmovs\tr2, r5\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tbvc.n\t13bdd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97c3c>\n+\tbvc.n\t13bdec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x97c54>\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::init():\n ./src/mira/skim.C:104\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n@@ -611272,19 +611272,19 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr7, r6\n \tlsrs\tr4, r5, #19\n \tmovs\tr7, r6\n-\tbne.n\t13c3d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x98238>\n+\tbne.n\t13c3e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x98250>\n \tmovs\tr2, r5\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tbne.n\t13c590 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x983f8>\n+\tbne.n\t13c5a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x98410>\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::init():\n ./src/mira/skim.C:104\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n@@ -612091,19 +612091,19 @@\n \tmovs\tr7, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #31\n \tmovs\tr7, r6\n \tlsls\tr0, r5, #26\n \tmovs\tr7, r6\n-\tldmia\tr3, {r3, r6}\n+\tldmia\tr3!, {r2, r4, r6}\n \tmovs\tr2, r5\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tldmia\tr3!, {r2, r5}\n+\tldmia\tr3!, {r4, r5}\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n void std::_Destroy_aux::__destroy >*>(std::vector >*, std::vector >*):\n /usr/include/c++/10/bits/stl_construct.h:149\n \tpush\t{r3, r4, r5, lr}\n /usr/include/c++/10/bits/stl_construct.h:151\n@@ -617797,21 +617797,21 @@\n \t...\n \tble.n\t13f5a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9b408>\n \tmovs\tr6, r6\n \tble.n\t13f57c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9b3e4>\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr2, r2, #13\n+\tasrs\tr6, r3, #13\n \tmovs\tr3, r5\n-\tstrh\tr4, [r2, #34]\t@ 0x22\n+\tstrh\tr0, [r4, #34]\t@ 0x22\n \tmovs\tr2, r5\n-\tasrs\tr2, r5, #13\n+\tasrs\tr6, r6, #13\n \tmovs\tr3, r5\n-\tsubs\tr3, #200\t@ 0xc8\n+\tsubs\tr3, #208\t@ 0xd0\n \tmovs\tr3, r5\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -618550,82 +618550,82 @@\n \tmov\tfp, r1\n \tb.n\t13f91a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9b782>\n \tnop\n \tbge.n\t13fad4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9b93c>\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #200]\t@ 0xc8\n+\tldr\tr7, [sp, #248]\t@ 0xf8\n \tmovs\tr2, r5\n-\tldr\tr7, [sp, #176]\t@ 0xb0\n+\tldr\tr7, [sp, #224]\t@ 0xe0\n \tmovs\tr2, r5\n-\tpush\t{r1, r3, r5, r6, lr}\n+\tpush\t{r1, r4, r5, r6, lr}\n \tmovs\tr4, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #752]\t@ 0x2f0\n+\tldr\tr6, [sp, #800]\t@ 0x320\n \tmovs\tr2, r5\n-\tldr\tr6, [sp, #696]\t@ 0x2b8\n+\tldr\tr6, [sp, #744]\t@ 0x2e8\n \tmovs\tr2, r5\n-\tstmia\tr6!, {r2, r3, r4, r5, r6}\n+\tstmia\tr6!, {r2, r7}\n \tmovs\tr4, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tsubs\tr2, #104\t@ 0x68\n+\tsubs\tr2, #112\t@ 0x70\n \tmovs\tr3, r5\n \tlsrs\tr0, r5, #31\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #19\n+\tasrs\tr0, r7, #19\n \tmovs\tr3, r5\n-\tasrs\tr2, r3, #16\n+\tasrs\tr6, r4, #16\n \tmovs\tr3, r5\n-\tcdp2\t0, 12, cr0, cr4, cr10, {1}\n-\tadds\tr2, r0, r1\n+\tcdp2\t0, 13, cr0, cr0, cr10, {1}\n+\tadds\tr6, r1, r1\n \tmovs\tr3, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tasrs\tr4, r2, #31\n+\tasrs\tr0, r4, #31\n \tmovs\tr3, r5\n-\tasrs\tr6, r6, #30\n+\tasrs\tr2, r0, #31\n \tmovs\tr3, r5\n-\tasrs\tr0, r3, #7\n+\tasrs\tr4, r4, #7\n \tmovs\tr3, r5\n-\tldc2l\t0, cr0, [sl, #168]!\t@ 0xa8\n-\tasrs\tr0, r1, #9\n+\tcdp2\t0, 0, cr0, cr6, cr10, {1}\n+\tasrs\tr4, r2, #9\n \tmovs\tr3, r5\n-\tcdp2\t0, 3, cr0, cr6, cr10, {1}\n-\tasrs\tr0, r5, #6\n+\tcdp2\t0, 4, cr0, cr2, cr10, {1}\n+\tasrs\tr4, r6, #6\n \tmovs\tr3, r5\n-\tasrs\tr6, r0, #12\n+\tasrs\tr2, r2, #12\n \tmovs\tr3, r5\n-\tasrs\tr4, r3, #13\n+\tasrs\tr0, r5, #13\n \tmovs\tr3, r5\n-\tasrs\tr2, r1, #9\n+\tasrs\tr6, r2, #9\n \tmovs\tr3, r5\n-\tasrs\tr0, r7, #5\n+\tasrs\tr4, r0, #6\n \tmovs\tr3, r5\n-\tasrs\tr2, r7, #28\n+\tasrs\tr6, r0, #29\n \tmovs\tr3, r5\n-\tasrs\tr4, r7, #4\n+\tasrs\tr0, r1, #5\n \tmovs\tr3, r5\n-\tsubs\tr0, #252\t@ 0xfc\n+\tsubs\tr1, #4\n \tmovs\tr3, r5\n-\tasrs\tr2, r3, #13\n+\tasrs\tr6, r4, #13\n \tmovs\tr3, r5\n-\tasrs\tr4, r2, #14\n+\tasrs\tr0, r4, #14\n \tmovs\tr3, r5\n-\tstc2l\t0, cr0, [r6, #-168]\t@ 0xffffff58\n-\tasrs\tr4, r2, #6\n+\tldc2l\t0, cr0, [r2, #-168]\t@ 0xffffff58\n+\tasrs\tr0, r4, #6\n \tmovs\tr3, r5\n-\tstc2\t0, cr0, [r2, #168]\t@ 0xa8\n-\tasrs\tr4, r6, #3\n+\tstc2\t0, cr0, [lr, #168]\t@ 0xa8\n+\tasrs\tr0, r0, #4\n \tmovs\tr3, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::findAdaptorRightClip(Read&, unsigned int, int&, int):\n ./src/mira/skim.C:3397\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #328]\t@ (13fcac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9bb14>)\n@@ -618807,19 +618807,19 @@\n \tmovs\tr0, r0\n \tbcc.n\t13fc9c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9bb04>\n \tmovs\tr6, r6\n \tbcc.n\t13fc40 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9baa8>\n \tmovs\tr6, r6\n \tbcc.n\t13fbf0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9ba58>\n \tmovs\tr6, r6\n-\tadds\tr6, #22\n+\tadds\tr6, #30\n \tmovs\tr3, r5\n-\tadds\tr6, #38\t@ 0x26\n+\tadds\tr6, #46\t@ 0x2e\n \tmovs\tr3, r5\n-\tadds\tr6, #30\n+\tadds\tr6, #38\t@ 0x26\n \tmovs\tr3, r5\n \tasrs\tr0, r7, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -622919,19 +622919,19 @@\n \t...\n \t\t\t@ instruction: 0xb6d2\n \tmovs\tr6, r6\n \t\t\t@ instruction: 0xb6be\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstcl\t0, cr0, [r2], #168\t@ 0xa8\n-\tldrb\tr4, [r4, r7]\n+\tstcl\t0, cr0, [lr], #168\t@ 0xa8\n+\tldrb\tr0, [r6, r7]\n \tmovs\tr2, r5\n-\tldcl\t0, cr0, [sl], #168\t@ 0xa8\n-\tasrs\tr0, r3, #21\n+\tstc\t0, cr0, [r6, #-168]\t@ 0xffffff58\n+\tasrs\tr0, r4, #21\n \tmovs\tr3, r5\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -623670,70 +623670,70 @@\n \tmov\tfp, r1\n \tb.n\t141f8a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9ddf2>\n \tnop\n \tcbz\tr2, 142196 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9dffe>\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr2, [r0, #3]\n+\tldrb\tr6, [r1, #3]\n \tmovs\tr2, r5\n-\tldrb\tr4, [r7, #2]\n+\tldrb\tr0, [r1, #3]\n \tmovs\tr2, r5\n-\tldrh\tr2, [r7, #54]\t@ 0x36\n+\tldrh\tr2, [r0, #56]\t@ 0x38\n \tmovs\tr4, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr4, [r1, #1]\n+\tldrb\tr0, [r3, #1]\n \tmovs\tr2, r5\n-\tldrb\tr6, [r7, #0]\n+\tldrb\tr2, [r1, #1]\n \tmovs\tr2, r5\n-\tadd\tr0, pc, #48\t@ (adr r0, 142188 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9dff0>)\n+\tadd\tr0, pc, #80\t@ (adr r0, 1421a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e010>)\n \tmovs\tr4, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tasrs\tr0, r7, #15\n+\tasrs\tr0, r0, #16\n \tmovs\tr3, r5\n \tlsls\tr0, r6, #20\n \tmovs\tr0, r0\n-\tcdp\t0, 7, cr0, cr12, cr10, {1}\n-\tstc\t0, cr0, [sl, #168]!\t@ 0xa8\n-\tbhi.n\t142218 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e080>\n+\tcdp\t0, 8, cr0, cr8, cr10, {1}\n+\tldc\t0, cr0, [r6, #168]!\t@ 0xa8\n+\tbhi.n\t142230 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e098>\n \tmovs\tr2, r5\n-\trsbs\tr0, r2, #42\t@ 0x2a\n+\trsbs\tr0, lr, #42\t@ 0x2a\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tsbc.w\tr0, r4, #42\t@ 0x2a\n-\tadc.w\tr0, r6, #42\t@ 0x2a\n-\tsbc.w\tr0, r8, sl, asr #32\n-\tbvc.n\t14209c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9df04>\n+\tsbcs.w\tr0, r0, #42\t@ 0x2a\n+\tadcs.w\tr0, r2, #42\t@ 0x2a\n+\tsbcs.w\tr0, r4, sl, asr #32\n+\tbvc.n\t1420b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9df1c>\n \tmovs\tr2, r5\n-\trsbs\tr0, r8, sl, asr #32\n-\tbvc.n\t14211c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9df84>\n+\t\t\t@ instruction: 0xebe4002a\n+\tbvc.n\t142134 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9df9c>\n \tmovs\tr2, r5\n-\t\t\t@ instruction: 0xeb38002a\n-\tldc\t0, cr0, [r6], {42}\t@ 0x2a\n-\tstcl\t0, cr0, [ip], #168\t@ 0xa8\n-\trsbs\tr0, sl, sl, asr #32\n-\tadd.w\tr0, r8, sl, asr #32\n-\t\t\t@ instruction: 0xf0ca002a\n-\tpkhtb\tr0, ip, sl, asr #32\n-\tasrs\tr4, r1, #10\n+\tadc.w\tr0, r4, sl, asr #32\n+\tstc\t0, cr0, [r2], #168\t@ 0xa8\n+\tldcl\t0, cr0, [r8], #168\t@ 0xa8\n+\t\t\t@ instruction: 0xebe6002a\n+\tadds.w\tr0, r4, sl, asr #32\n+\t\t\t@ instruction: 0xf0d6002a\n+\t\t\t@ instruction: 0xead8002a\n+\tasrs\tr4, r2, #10\n \tmovs\tr3, r5\n-\tstcl\t0, cr0, [sl], #168\t@ 0xa8\n-\tstc\t0, cr0, [r4, #-168]!\t@ 0xffffff58\n-\tbvs.n\t142168 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9dfd0>\n+\tldcl\t0, cr0, [r6], #168\t@ 0xa8\n+\tldc\t0, cr0, [r0, #-168]!\t@ 0xffffff58\n+\tbvs.n\t142180 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9dfe8>\n \tmovs\tr2, r5\n-\t\t\t@ instruction: 0xeb24002a\n-\tbvc.n\t1421e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e050>\n+\t\t\t@ instruction: 0xeb30002a\n+\tbvc.n\t142200 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e068>\n \tmovs\tr2, r5\n-\teor.w\tr0, r4, sl, asr #32\n+\teors.w\tr0, r0, sl, asr #32\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::findAdaptorRightClip(Read&, unsigned int, int&, int):\n ./src/mira/skim.C:3397\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #328]\t@ (14231c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e184>)\n \tldr\tr4, [pc, #332]\t@ (142320 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e188>)\n@@ -623914,19 +623914,19 @@\n \tmovs\tr0, r0\n \tadd\tr5, sp, #520\t@ 0x208\n \tmovs\tr6, r6\n \tadd\tr5, sp, #328\t@ 0x148\n \tmovs\tr6, r6\n \tadd\tr5, sp, #160\t@ 0xa0\n \tmovs\tr6, r6\n-\tlsrs\tr6, r4, #30\n+\tlsrs\tr6, r5, #30\n \tmovs\tr3, r5\n-\tlsrs\tr6, r6, #30\n+\tlsrs\tr6, r7, #30\n \tmovs\tr3, r5\n-\tlsrs\tr6, r5, #30\n+\tlsrs\tr6, r6, #30\n \tmovs\tr3, r5\n \tlsls\tr4, r3, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -628026,21 +628026,21 @@\n \t...\n \tstr\tr0, [sp, #392]\t@ 0x188\n \tmovs\tr6, r6\n \tstr\tr0, [sp, #312]\t@ 0x138\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r1, r4, r5, r6}\n+\tstmia\tr6!, {r1, r2, r3, r4, r5, r6}\n \tmovs\tr2, r5\n-\tadds\tr7, #116\t@ 0x74\n+\tadds\tr7, #128\t@ 0x80\n \tmovs\tr2, r5\n-\tstmia\tr6!, {r1, r3, r7}\n+\tstmia\tr6!, {r1, r2, r4, r7}\n \tmovs\tr2, r5\n-\tcdp\t0, 14, cr0, cr8, cr10, {1}\n+\tcdp\t0, 15, cr0, cr0, cr10, {1}\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n /usr/include/boost/thread/lock_types.hpp:329\n@@ -628778,85 +628778,85 @@\n \tmov\tfp, r1\n \tb.n\t1445fa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa0462>\n \tnop\n \tldrh\tr2, [r5, #40]\t@ 0x28\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr2, [r2, r1]\n+\tstrh\tr6, [r3, r1]\n \tmovs\tr2, r5\n-\tstrh\tr4, [r1, r1]\n+\tstrh\tr0, [r3, r1]\n \tmovs\tr2, r5\n-\tldr\tr2, [r1, #8]\n+\tldr\tr2, [r2, #8]\n \tmovs\tr4, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr4, [r3, r7]\n+\tstr\tr0, [r5, r7]\n \tmovs\tr2, r5\n-\tstr\tr6, [r1, r7]\n+\tstr\tr2, [r3, r7]\n \tmovs\tr2, r5\n-\tldrb\tr4, [r3, #6]\n+\tldrb\tr4, [r4, #6]\n \tmovs\tr4, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tstc\t0, cr0, [r8, #168]\t@ 0xa8\n+\tldc\t0, cr0, [r0, #168]\t@ 0xa8\n \tlsrs\tr0, r7, #25\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r2, r3}\n+\tldmia\tr0!, {r3, r4}\n \tmovs\tr2, r5\n-\tstmia\tr7!, {r1, r3, r4, r5}\n+\tstmia\tr7!, {r1, r2, r6}\n \tmovs\tr2, r5\n-\tcbz\tr4, 144818 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa0680>\n+\tcbz\tr0, 14481c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa0684>\n \tmovs\tr2, r5\n-\tldmia\tr3!, {r1, r5, r6}\n+\tldmia\tr3, {r1, r2, r3, r5, r6}\n \tmovs\tr2, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tldmia\tr2, {r2, r4, r5, r6, r7}\n+\tldmia\tr3!, {}\n \tmovs\tr2, r5\n-\tldmia\tr2, {r1, r2, r4, r6, r7}\n+\tldmia\tr2!, {r1, r5, r6, r7}\n \tmovs\tr2, r5\n-\tstmia\tr4!, {r3, r4, r5, r6, r7}\n+\tstmia\tr5!, {r2}\n \tmovs\tr2, r5\n-\tcbz\tr2, 1447fe , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa0666>\n+\tcbz\tr6, 144800 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa0668>\n \tmovs\tr2, r5\n-\tstmia\tr5!, {r3, r5, r6}\n+\tstmia\tr5!, {r2, r4, r5, r6}\n \tmovs\tr2, r5\n-\tcbz\tr6, 144814 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa067c>\n+\tcbz\tr2, 144818 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa0680>\n \tmovs\tr2, r5\n-\tstmia\tr4!, {r3, r6, r7}\n+\tstmia\tr4!, {r2, r4, r6, r7}\n \tmovs\tr2, r5\n-\tstmia\tr6!, {r1, r2, r5}\n+\tstmia\tr6!, {r1, r4, r5}\n \tmovs\tr2, r5\n-\tstmia\tr6!, {r2, r3, r4, r5, r6}\n+\tstmia\tr6!, {r3, r7}\n \tmovs\tr2, r5\n-\tstmia\tr5!, {r1, r3, r5, r6}\n+\tstmia\tr5!, {r1, r2, r4, r5, r6}\n \tmovs\tr2, r5\n-\tstmia\tr4!, {r3, r4, r7}\n+\tstmia\tr4!, {r2, r5, r7}\n \tmovs\tr2, r5\n-\tldmia\tr2!, {r1, r3, r4, r6}\n+\tldmia\tr2, {r1, r2, r5, r6}\n \tmovs\tr2, r5\n-\tstmia\tr4!, {r2, r3, r4, r6}\n+\tstmia\tr4!, {r3, r5, r6}\n \tmovs\tr2, r5\n-\tldc\t0, cr0, [ip], {42}\t@ 0x2a\n-\tstmia\tr6!, {r1, r3, r4, r5, r6}\n+\tstc\t0, cr0, [r4], #-168\t@ 0xffffff58\n+\tstmia\tr6!, {r1, r2, r7}\n \tmovs\tr2, r5\n-\tstmia\tr6!, {r2, r4, r5, r7}\n+\tstmia\tr6!, {r6, r7}\n \tmovs\tr2, r5\n-\tadd\tsp, #408\t@ 0x198\n+\tadd\tsp, #456\t@ 0x1c8\n \tmovs\tr2, r5\n-\tstmia\tr4!, {r2, r4, r5, r7}\n+\tstmia\tr4!, {r6, r7}\n \tmovs\tr2, r5\n-\tsub\tsp, #136\t@ 0x88\n+\tsub\tsp, #184\t@ 0xb8\n \tmovs\tr2, r5\n-\tstmia\tr4!, {r2, r4}\n+\tstmia\tr4!, {r5}\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::findAdaptorRightClip(Read&, unsigned int, int&, int):\n ./src/mira/skim.C:3397\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #328]\t@ (14498c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa07f4>)\n@@ -629038,17 +629038,17 @@\n \tmovs\tr0, r0\n \tstrh\tr2, [r2, #56]\t@ 0x38\n \tmovs\tr6, r6\n \tstrh\tr2, [r4, #54]\t@ 0x36\n \tmovs\tr6, r6\n \tstrh\tr0, [r7, #52]\t@ 0x34\n \tmovs\tr6, r6\n-\tldmdb\tr6!, {r1, r3, r5}\n-\tstrd\tr0, r0, [r6, #-168]\t@ 0xa8\n \tldmdb\tlr!, {r1, r3, r5}\n+\tstrd\tr0, r0, [lr, #-168]\t@ 0xa8\n+\tstrd\tr0, r0, [r6, #-168]\t@ 0xa8\n \tlsls\tr4, r0, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Skim::checkForPotentialHits(signed char, unsigned int, std::vector >&, std::vector >&, std::vector >&):\n@@ -633127,21 +633127,21 @@\n \t...\n \tldr\tr2, [r5, #32]\n \tmovs\tr6, r6\n \tldr\tr6, [r2, #32]\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #232\t@ (adr r0, 146928 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2790>)\n+\tadd\tr0, pc, #280\t@ (adr r0, 146958 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa27c0>)\n \tmovs\tr2, r5\n-\tasrs\tr4, r7, #4\n+\tasrs\tr0, r1, #5\n \tmovs\tr2, r5\n-\tadd\tr0, pc, #328\t@ (adr r0, 146990 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa27f8>)\n+\tadd\tr0, pc, #376\t@ (adr r0, 1469c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2828>)\n \tmovs\tr2, r5\n-\tldmia\tr0!, {r4, r5, r7}\n+\tldmia\tr0!, {r3, r4, r5, r7}\n \tmovs\tr2, r5\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -633880,87 +633880,87 @@\n \tmov\tfp, r1\n \tb.n\t146c32 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2a9a>\n \tnop\n \tstr\tr2, [r6, #108]\t@ 0x6c\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr4, #26\n+\tcmp\tr4, #38\t@ 0x26\n \tmovs\tr2, r5\n-\tcmp\tr4, #20\n+\tcmp\tr4, #32\n \tmovs\tr2, r5\n-\tnegs\tr2, r2\n+\tnegs\tr2, r3\n \tmovs\tr4, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr3, #164\t@ 0xa4\n+\tcmp\tr3, #176\t@ 0xb0\n \tmovs\tr2, r5\n-\tcmp\tr3, #150\t@ 0x96\n+\tcmp\tr3, #162\t@ 0xa2\n \tmovs\tr2, r5\n-\tstrh\tr4, [r4, r5]\n+\tstrh\tr4, [r5, r5]\n \tmovs\tr4, r5\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r4, r6}\n+\tstmia\tr7!, {r3, r4, r6}\n \tmovs\tr2, r5\n \tasrs\tr4, r6, #1\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #848\t@ (adr r1, 147160 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2fc8>)\n+\tadd\tr1, pc, #896\t@ (adr r1, 147190 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2ff8>)\n \tmovs\tr2, r5\n-\tadd\tr1, pc, #8\t@ (adr r1, 146e1c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2c84>)\n+\tadd\tr1, pc, #56\t@ (adr r1, 146e4c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2cb4>)\n \tmovs\tr2, r5\n-\tldrh\tr4, [r5, #28]\n+\tldrh\tr0, [r7, #28]\n \tmovs\tr2, r5\n-\tadd\tr5, pc, #168\t@ (adr r5, 146ec4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2d2c>)\n+\tadd\tr5, pc, #216\t@ (adr r5, 146ef4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2d5c>)\n \tmovs\tr2, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #752\t@ (adr r4, 147114 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2f7c>)\n+\tadd\tr4, pc, #800\t@ (adr r4, 147144 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2fac>)\n \tmovs\tr2, r5\n-\tadd\tr4, pc, #632\t@ (adr r4, 1470a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2f08>)\n+\tadd\tr4, pc, #680\t@ (adr r4, 1470d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2f38>)\n \tmovs\tr2, r5\n-\tldr\tr6, [sp, #768]\t@ 0x300\n+\tldr\tr6, [sp, #816]\t@ 0x330\n \tmovs\tr2, r5\n-\tldrh\tr2, [r4, #22]\n+\tldrh\tr6, [r5, #22]\n \tmovs\tr2, r5\n-\tldr\tr7, [sp, #192]\t@ 0xc0\n+\tldr\tr7, [sp, #240]\t@ 0xf0\n \tmovs\tr2, r5\n-\tldrh\tr6, [r3, #24]\n+\tldrh\tr2, [r5, #24]\n \tmovs\tr2, r5\n-\tldr\tr6, [sp, #576]\t@ 0x240\n+\tldr\tr6, [sp, #624]\t@ 0x270\n \tmovs\tr2, r5\n-\tldr\tr7, [sp, #952]\t@ 0x3b8\n+\tldr\tr7, [sp, #1000]\t@ 0x3e8\n \tmovs\tr2, r5\n-\tadd\tr0, pc, #272\t@ (adr r0, 146f54 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2dbc>)\n+\tadd\tr0, pc, #320\t@ (adr r0, 146f84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2dec>)\n \tmovs\tr2, r5\n-\tldr\tr7, [sp, #200]\t@ 0xc8\n+\tldr\tr7, [sp, #248]\t@ 0xf8\n \tmovs\tr2, r5\n-\tldr\tr6, [sp, #384]\t@ 0x180\n+\tldr\tr6, [sp, #432]\t@ 0x1b0\n \tmovs\tr2, r5\n-\tadd\tr4, pc, #136\t@ (adr r4, 146ed8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2d40>)\n+\tadd\tr4, pc, #184\t@ (adr r4, 146f08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2d70>)\n \tmovs\tr2, r5\n-\tldr\tr6, [sp, #144]\t@ 0x90\n+\tldr\tr6, [sp, #192]\t@ 0xc0\n \tmovs\tr2, r5\n-\tstmia\tr5!, {r2, r5, r6, r7}\n+\tstmia\tr5!, {r2, r3, r5, r6, r7}\n \tmovs\tr2, r5\n-\tadd\tr0, pc, #264\t@ (adr r0, 146f64 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2dcc>)\n+\tadd\tr0, pc, #312\t@ (adr r0, 146f94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2dfc>)\n \tmovs\tr2, r5\n-\tadd\tr0, pc, #496\t@ (adr r0, 147050 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2eb8>)\n+\tadd\tr0, pc, #544\t@ (adr r0, 147080 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2ee8>)\n \tmovs\tr2, r5\n-\tldrh\tr6, [r5, #16]\n+\tldrh\tr2, [r7, #16]\n \tmovs\tr2, r5\n-\tldr\tr6, [sp, #496]\t@ 0x1f0\n+\tldr\tr6, [sp, #544]\t@ 0x220\n \tmovs\tr2, r5\n-\tldrh\tr2, [r5, #18]\n+\tldrh\tr6, [r6, #18]\n \tmovs\tr2, r5\n-\tldr\tr5, [sp, #880]\t@ 0x370\n+\tldr\tr5, [sp, #928]\t@ 0x3a0\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim::findAdaptorRightClip(Read&, unsigned int, int&, int):\n ./src/mira/skim.C:3397\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #328]\t@ (146fc4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa2e2c>)\n@@ -634142,19 +634142,19 @@\n \tmovs\tr0, r0\n \tstr\tr2, [r3, #12]\n \tmovs\tr6, r6\n \tstr\tr2, [r5, #8]\n \tmovs\tr6, r6\n \tstr\tr0, [r0, #8]\n \tmovs\tr6, r6\n-\tstmia\tr2!, {r1, r2, r3, r4, r5, r6, r7}\n+\tstmia\tr3!, {r1, r2}\n \tmovs\tr2, r5\n-\tstmia\tr3!, {r1, r2, r3}\n+\tstmia\tr3!, {r1, r2, r4}\n \tmovs\tr2, r5\n-\tstmia\tr3!, {r1, r2}\n+\tstmia\tr3!, {r1, r2, r3}\n \tmovs\tr2, r5\n \tlsrs\tr0, r7, #3\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -636237,23 +636237,23 @@\n \tmovs\tr0, r0\n \tldr\tr6, [r0, r5]\n \tmovs\tr6, r6\n \tlsrs\tr0, r4, #9\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tcbnz\tr6, 14807c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa3ee4>\n+\tcbnz\tr6, 14807e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa3ee6>\n \tmovs\tr2, r5\n-\t\t\t@ instruction: 0xb8dc\n+\t\t\t@ instruction: 0xb8e4\n \tmovs\tr2, r5\n \tstrb\tr4, [r5, r1]\n \tmovs\tr6, r6\n-\tpush\t{r1, r3, r4, r5, r6, lr}\n+\tpush\t{r1, r7, lr}\n \tmovs\tr2, r5\n-\tcbz\tr0, 1480c2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa3f2a>\n+\tcbz\tr0, 1480c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa3f2c>\n \tmovs\tr2, r5\n \tlsrs\tr4, r6, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -637809,20 +637809,20 @@\n \t...\n \tmov\tr2, lr\n \tmovs\tr6, r6\n \tmov\tr6, fp\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr6, [r7, #18]\n+\tldrb\tr2, [r1, #19]\n \tmovs\tr2, r5\n-\tstcl\t0, cr0, [r0, #164]\t@ 0xa4\n-\tldrb\tr6, [r2, #19]\n+\tstcl\t0, cr0, [ip, #164]\t@ 0xa4\n+\tldrb\tr2, [r4, #19]\n \tmovs\tr2, r5\n-\tadd\tr5, pc, #216\t@ (adr r5, 148cec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa4b54>)\n+\tadd\tr5, pc, #248\t@ (adr r5, 148d0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa4b74>)\n \tmovs\tr2, r5\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \tbics\tr6, r1\n \tmovs\tr6, r6\n@@ -638396,73 +638396,73 @@\n \tbl\t28c58 \n /usr/include/boost/thread/pthread/condition_variable.hpp:54\n \tb.n\t148f18 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa4d80>\n \tb.n\t148f90 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa4df8>\n \tb.n\t148ffa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa4e62>\n \tb.n\t148f2a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa4d92>\n \tnop\n-\tadd\tr6, pc, #448\t@ (adr r6, 149204 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa506c>)\n+\tadd\tr6, pc, #480\t@ (adr r6, 149224 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa508c>)\n \tmovs\tr2, r5\n \tlsrs\tr4, r2, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr4, [r6, #20]\n+\tldrb\tr0, [r0, #21]\n \tmovs\tr2, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #992\t@ (adr r4, 14943c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa52a4>)\n+\tadd\tr5, pc, #0\t@ (adr r5, 14905c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa4ec4>)\n \tmovs\tr2, r5\n-\tldrb\tr6, [r2, #29]\n+\tldrb\tr2, [r4, #29]\n \tmovs\tr2, r5\n-\tldrb\tr0, [r2, #30]\n+\tldrb\tr4, [r3, #30]\n \tmovs\tr2, r5\n-\tstrh\tr2, [r0, #22]\n+\tstrh\tr6, [r1, #22]\n \tmovs\tr2, r5\n-\tldr\tr4, [r4, #16]\n+\tldr\tr0, [r6, #16]\n \tmovs\tr2, r5\n-\tldrb\tr2, [r6, #21]\n+\tldrb\tr6, [r7, #21]\n \tmovs\tr2, r5\n-\tldr\tr0, [r4, #20]\n+\tldr\tr4, [r5, #20]\n \tmovs\tr2, r5\n-\tadd\tr5, pc, #824\t@ (adr r5, 1493b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa5218>)\n+\tadd\tr5, pc, #856\t@ (adr r5, 1493d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa5238>)\n \tmovs\tr2, r5\n-\tldrb\tr4, [r5, #17]\n+\tldrb\tr0, [r7, #17]\n \tmovs\tr2, r5\n-\tldrb\tr2, [r1, #17]\n+\tldrb\tr6, [r2, #17]\n \tmovs\tr2, r5\n-\tldrb\tr4, [r5, #16]\n+\tldrb\tr0, [r7, #16]\n \tmovs\tr2, r5\n-\tldrb\tr2, [r6, #26]\n+\tldrb\tr6, [r7, #26]\n \tmovs\tr2, r5\n-\tldrb\tr0, [r4, #23]\n+\tldrb\tr4, [r5, #23]\n \tmovs\tr2, r5\n-\tldr\tr2, [r1, #8]\n+\tldr\tr6, [r2, #8]\n \tmovs\tr2, r5\n-\tldrb\tr0, [r7, #21]\n+\tldrb\tr4, [r0, #22]\n \tmovs\tr2, r5\n-\tldrb\tr6, [r1, #23]\n+\tldrb\tr2, [r3, #23]\n \tmovs\tr2, r5\n-\tldrb\tr4, [r7, #18]\n+\tldrb\tr0, [r1, #19]\n \tmovs\tr2, r5\n-\tstrh\tr2, [r5, #12]\n+\tstrh\tr6, [r6, #12]\n \tmovs\tr2, r5\n-\tldrb\tr4, [r1, #15]\n+\tldrb\tr0, [r3, #15]\n \tmovs\tr2, r5\n-\tstrh\tr2, [r7, #12]\n+\tstrh\tr6, [r0, #14]\n \tmovs\tr2, r5\n-\tstr\tr4, [r1, #124]\t@ 0x7c\n+\tstr\tr0, [r3, #124]\t@ 0x7c\n \tmovs\tr2, r5\n-\tldrb\tr2, [r3, #16]\n+\tldrb\tr6, [r4, #16]\n \tmovs\tr2, r5\n-\tldr\tr0, [r1, #0]\n+\tldr\tr4, [r2, #0]\n \tmovs\tr2, r5\n-\tstrh\tr2, [r3, #10]\n+\tstrh\tr6, [r4, #10]\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::selectPotentialHitsForSave2(signed char, unsigned int, Skim >::cfh_threaddata_t&):\n ./src/mira/skim.C:1895\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -639784,23 +639784,23 @@\n \tmovs\tr0, r0\n \tsubs\tr6, #114\t@ 0x72\n \tmovs\tr6, r6\n \tlsls\tr4, r5, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #392]\t@ 0x188\n+\tldr\tr6, [sp, #424]\t@ 0x1a8\n \tmovs\tr2, r5\n-\tldr\tr6, [sp, #32]\n+\tldr\tr6, [sp, #64]\t@ 0x40\n \tmovs\tr2, r5\n \tsubs\tr1, #152\t@ 0x98\n \tmovs\tr6, r6\n-\tldr\tr2, [sp, #664]\t@ 0x298\n+\tldr\tr2, [sp, #696]\t@ 0x2b8\n \tmovs\tr2, r5\n-\tldr\tr0, [sp, #208]\t@ 0xd0\n+\tldr\tr0, [sp, #240]\t@ 0xf0\n \tmovs\tr2, r5\n \tlsrs\tr4, r3, #22\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -641356,21 +641356,21 @@\n \t...\n \tcmp\tr3, #154\t@ 0x9a\n \tmovs\tr6, r6\n \tcmp\tr3, #134\t@ 0x86\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr6, [r4, #28]\n+\tstr\tr2, [r6, #28]\n \tmovs\tr2, r5\n-\tbcs.n\t14a6b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa651c>\n+\tbcs.n\t14a6cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6534>\n \tmovs\tr1, r5\n-\tstr\tr6, [r7, #28]\n+\tstr\tr2, [r1, #32]\n \tmovs\tr2, r5\n-\tldrh\tr6, [r3, #18]\n+\tldrh\tr6, [r4, #18]\n \tmovs\tr2, r5\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \tcmp\tr0, #182\t@ 0xb6\n \tmovs\tr6, r6\n@@ -641944,73 +641944,73 @@\n \tbl\t28c58 \n /usr/include/boost/thread/pthread/condition_variable.hpp:54\n \tb.n\t14a9f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6858>\n \tb.n\t14aa68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa68d0>\n \tb.n\t14aad2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa693a>\n \tb.n\t14aa02 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa686a>\n \tnop\n-\tldrh\tr0, [r3, #28]\n+\tldrh\tr0, [r4, #28]\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr4, [r3, #36]\t@ 0x24\n+\tstr\tr0, [r5, #36]\t@ 0x24\n \tmovs\tr2, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tldrh\tr0, [r4, #16]\n+\tldrh\tr0, [r5, #16]\n \tmovs\tr2, r5\n-\tstr\tr6, [r7, #68]\t@ 0x44\n+\tstr\tr2, [r1, #72]\t@ 0x48\n \tmovs\tr2, r5\n-\tstr\tr0, [r7, #72]\t@ 0x48\n+\tstr\tr4, [r0, #76]\t@ 0x4c\n \tmovs\tr2, r5\n-\tstr\tr2, [r5, #124]\t@ 0x7c\n+\tstr\tr6, [r6, #124]\t@ 0x7c\n \tmovs\tr2, r5\n-\tldr\tr6, [pc, #304]\t@ (14ac74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6adc>)\n+\tldr\tr6, [pc, #352]\t@ (14aca4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6b0c>)\n \tmovs\tr2, r5\n-\tstr\tr2, [r3, #40]\t@ 0x28\n+\tstr\tr6, [r4, #40]\t@ 0x28\n \tmovs\tr2, r5\n-\tldr\tr6, [pc, #544]\t@ (14ad6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6bd4>)\n+\tldr\tr6, [pc, #592]\t@ (14ad9c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6c04>)\n \tmovs\tr2, r5\n-\tldrh\tr6, [r6, #22]\n+\tldrh\tr6, [r7, #22]\n \tmovs\tr2, r5\n-\tstr\tr4, [r2, #24]\n+\tstr\tr0, [r4, #24]\n \tmovs\tr2, r5\n-\tstr\tr2, [r6, #20]\n+\tstr\tr6, [r7, #20]\n \tmovs\tr2, r5\n-\tstr\tr4, [r2, #20]\n+\tstr\tr0, [r4, #20]\n \tmovs\tr2, r5\n-\tstr\tr2, [r3, #60]\t@ 0x3c\n+\tstr\tr6, [r4, #60]\t@ 0x3c\n \tmovs\tr2, r5\n-\tstr\tr0, [r1, #48]\t@ 0x30\n+\tstr\tr4, [r2, #48]\t@ 0x30\n \tmovs\tr2, r5\n-\tldr\tr5, [pc, #712]\t@ (14ae30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6c98>)\n+\tldr\tr5, [pc, #760]\t@ (14ae60 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6cc8>)\n \tmovs\tr2, r5\n-\tstr\tr0, [r4, #40]\t@ 0x28\n+\tstr\tr4, [r5, #40]\t@ 0x28\n \tmovs\tr2, r5\n-\tstr\tr6, [r6, #44]\t@ 0x2c\n+\tstr\tr2, [r0, #48]\t@ 0x30\n \tmovs\tr2, r5\n-\tstr\tr4, [r4, #28]\n+\tstr\tr0, [r6, #28]\n \tmovs\tr2, r5\n-\tstr\tr2, [r2, #108]\t@ 0x6c\n+\tstr\tr6, [r3, #108]\t@ 0x6c\n \tmovs\tr2, r5\n-\tstr\tr4, [r6, #12]\n+\tstr\tr0, [r0, #16]\n \tmovs\tr2, r5\n-\tstr\tr2, [r4, #108]\t@ 0x6c\n+\tstr\tr6, [r5, #108]\t@ 0x6c\n \tmovs\tr2, r5\n-\tldr\tr4, [pc, #976]\t@ (14af54 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6dbc>)\n+\tldr\tr5, [pc, #0]\t@ (14ab84 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa69ec>)\n \tmovs\tr2, r5\n-\tstr\tr2, [r0, #20]\n+\tstr\tr6, [r1, #20]\n \tmovs\tr2, r5\n-\tldr\tr5, [pc, #192]\t@ (14ac4c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6ab4>)\n+\tldr\tr5, [pc, #240]\t@ (14ac7c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa6ae4>)\n \tmovs\tr2, r5\n-\tstr\tr2, [r0, #104]\t@ 0x68\n+\tstr\tr6, [r1, #104]\t@ 0x68\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim >::selectPotentialHitsForSave2(signed char, unsigned int, Skim >::cfh_threaddata_t&):\n ./src/mira/skim.C:1895\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -643332,23 +643332,23 @@\n \tmovs\tr0, r0\n \tmovs\tr3, #154\t@ 0x9a\n \tmovs\tr6, r6\n \tlsrs\tr4, r1, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrh\tr2, [r1, #28]\n+\tstrh\tr2, [r2, #28]\n \tmovs\tr2, r5\n-\tstrh\tr0, [r6, #24]\n+\tstrh\tr0, [r7, #24]\n \tmovs\tr2, r5\n \tsubs\tr0, r0, #3\n \tmovs\tr6, r6\n-\tldrb\tr6, [r1, #31]\n+\tldrb\tr6, [r2, #31]\n \tmovs\tr2, r5\n-\tldrb\tr4, [r3, #21]\n+\tldrb\tr4, [r4, #21]\n \tmovs\tr2, r5\n \tlsrs\tr0, r3, #9\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -644902,21 +644902,21 @@\n \t...\n \tasrs\tr2, r4, #2\n \tmovs\tr6, r6\n \tasrs\tr6, r1, #2\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmov\tlr, sp\n+\tmov\tsl, pc\n \tmovs\tr2, r5\n-\t\t\t@ instruction: 0xb7f0\n+\t\t\t@ instruction: 0xb7fc\n \tmovs\tr1, r5\n-\tbx\tr0\n+\tbx\tr2\n \tmovs\tr2, r5\n-\tldr\tr6, [r4, #116]\t@ 0x74\n+\tldr\tr6, [r5, #116]\t@ 0x74\n \tmovs\tr2, r5\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \tlsrs\tr6, r7, #22\n \tmovs\tr6, r6\n@@ -645490,73 +645490,73 @@\n \tbl\t28c58 \n /usr/include/boost/thread/pthread/condition_variable.hpp:54\n \tb.n\t14c4e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8350>\n \tb.n\t14c560 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa83c8>\n \tb.n\t14c5ca , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8432>\n \tb.n\t14c4fa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8362>\n \tnop\n-\tstrb\tr0, [r4, #2]\n+\tstrb\tr0, [r5, #2]\n \tmovs\tr2, r5\n \tlsrs\tr4, r7, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbxns\tip\n+\tbx\tlr\n \tmovs\tr2, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tldr\tr0, [r5, #112]\t@ 0x70\n+\tldr\tr0, [r6, #112]\t@ 0x70\n \tmovs\tr2, r5\n-\tldr\tr1, [pc, #536]\t@ (14c848 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa86b0>)\n+\tldr\tr1, [pc, #584]\t@ (14c878 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa86e0>)\n \tmovs\tr2, r5\n-\tldr\tr1, [pc, #768]\t@ (14c934 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa879c>)\n+\tldr\tr1, [pc, #816]\t@ (14c964 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa87cc>)\n \tmovs\tr2, r5\n-\tldr\tr4, [pc, #968]\t@ (14ca00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8868>)\n+\tldr\tr4, [pc, #1016]\t@ (14ca30 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8898>)\n \tmovs\tr2, r5\n-\tadds\tr3, #84\t@ 0x54\n+\tadds\tr3, #96\t@ 0x60\n \tmovs\tr2, r5\n-\t\t\t@ instruction: 0x47a2\n+\t\t\t@ instruction: 0x47ae\n \tmovs\tr2, r5\n-\tadds\tr3, #144\t@ 0x90\n+\tadds\tr3, #156\t@ 0x9c\n \tmovs\tr2, r5\n-\tldr\tr6, [r7, #124]\t@ 0x7c\n+\tstrb\tr6, [r0, #0]\n \tmovs\tr2, r5\n-\tmov\tip, r3\n+\tmov\tr8, r5\n \tmovs\tr2, r5\n-\tmov\tr2, pc\n+\tmov\tlr, r0\n \tmovs\tr2, r5\n-\tmov\tr4, fp\n+\tmov\tr0, sp\n \tmovs\tr2, r5\n-\tldr\tr0, [pc, #904]\t@ (14c9e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8848>)\n+\tldr\tr0, [pc, #952]\t@ (14ca10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8878>)\n \tmovs\tr2, r5\n-\tldr\tr0, [pc, #64]\t@ (14c69c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8504>)\n+\tldr\tr0, [pc, #112]\t@ (14c6cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8534>)\n \tmovs\tr2, r5\n-\tadds\tr2, #186\t@ 0xba\n+\tadds\tr2, #198\t@ 0xc6\n \tmovs\tr2, r5\n-\tblx\tr5\n+\tblxns\tr6\n \tmovs\tr2, r5\n-\t\t\t@ instruction: 0x47fe\n+\tldr\tr0, [pc, #40]\t@ (14c690 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa84f8>)\n \tmovs\tr2, r5\n-\tmov\tip, sp\n+\tmov\tr8, pc\n \tmovs\tr2, r5\n-\tldr\tr3, [pc, #872]\t@ (14c9d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8840>)\n+\tldr\tr3, [pc, #920]\t@ (14ca08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8870>)\n \tmovs\tr2, r5\n-\tcmp\tip, pc\n+\tmov\tr0, r1\n \tmovs\tr2, r5\n-\tldr\tr3, [pc, #936]\t@ (14ca20 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8888>)\n+\tldr\tr3, [pc, #984]\t@ (14ca50 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa88b8>)\n \tmovs\tr2, r5\n-\tadds\tr1, #252\t@ 0xfc\n+\tadds\tr2, #8\n \tmovs\tr2, r5\n-\tmov\tr2, r9\n+\tmov\tr6, sl\n \tmovs\tr2, r5\n-\tadds\tr2, #56\t@ 0x38\n+\tadds\tr2, #68\t@ 0x44\n \tmovs\tr2, r5\n-\tldr\tr3, [pc, #552]\t@ (14c8b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8718>)\n+\tldr\tr3, [pc, #600]\t@ (14c8e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa8748>)\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n Skim::selectPotentialHitsForSave2(signed char, unsigned int, Skim::cfh_threaddata_t&):\n ./src/mira/skim.C:1895\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -646878,23 +646878,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr2, r4, #2\n \tmovs\tr6, r6\n \tlsrs\tr0, r2, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr2, [r2, #8]\n+\tldr\tr2, [r3, #8]\n \tmovs\tr2, r5\n-\tldr\tr0, [r7, #0]\n+\tldr\tr0, [r0, #4]\n \tmovs\tr2, r5\n \tlsls\tr0, r1, #15\n \tmovs\tr6, r6\n-\tstr\tr6, [r2, #76]\t@ 0x4c\n+\tstr\tr6, [r3, #76]\t@ 0x4c\n \tmovs\tr2, r5\n-\tstr\tr4, [r4, #36]\t@ 0x24\n+\tstr\tr4, [r5, #36]\t@ 0x24\n \tmovs\tr2, r5\n \tasrs\tr0, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -648429,21 +648429,21 @@\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tnop\n \t...\n \trsb\tr0, sl, #11862016\t@ 0xb50000\n \tsubs.w\tr0, r6, #11862016\t@ 0xb50000\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr4, #22\n+\tcmp\tr4, #34\t@ 0x22\n \tmovs\tr2, r5\n-\tldr\tr5, [sp, #96]\t@ 0x60\n+\tldr\tr5, [sp, #144]\t@ 0x90\n \tmovs\tr1, r5\n-\tcmp\tr4, #46\t@ 0x2e\n+\tcmp\tr4, #58\t@ 0x3a\n \tmovs\tr2, r5\n-\tstrb\tr6, [r1, r2]\n+\tstrb\tr6, [r2, r2]\n \tmovs\tr2, r5\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf2e60035\n /usr/include/boost/thread/pthread/mutex.hpp:70\n@@ -649016,73 +649016,73 @@\n \tstr\tr3, [sp, #60]\t@ 0x3c\n \tbl\t28c58 \n /usr/include/boost/thread/pthread/condition_variable.hpp:54\n \tb.n\t14dfc0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa9e28>\n \tb.n\t14e038 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa9ea0>\n \tb.n\t14e0a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa9f0c>\n \tb.n\t14dfd2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa9e3a>\n-\tstrb\tr0, [r1, r7]\n+\tstrb\tr0, [r2, r7]\n \tmovs\tr2, r5\n \tlsls\tr4, r3, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr4, #140\t@ 0x8c\n+\tcmp\tr4, #152\t@ 0x98\n \tmovs\tr2, r5\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tstrb\tr0, [r2, r1]\n+\tstrb\tr0, [r3, r1]\n \tmovs\tr2, r5\n-\tcmp\tr6, #174\t@ 0xae\n+\tcmp\tr6, #186\t@ 0xba\n \tmovs\tr2, r5\n-\tcmp\tr6, #232\t@ 0xe8\n+\tcmp\tr6, #244\t@ 0xf4\n \tmovs\tr2, r5\n-\tadds\tr2, #26\n+\tadds\tr2, #38\t@ 0x26\n \tmovs\tr2, r5\n-\tadds\tr4, r7, r1\n+\tadds\tr0, r1, r2\n \tmovs\tr2, r5\n-\tcmp\tr4, #202\t@ 0xca\n+\tcmp\tr4, #214\t@ 0xd6\n \tmovs\tr2, r5\n-\tadds\tr0, r7, r2\n+\tadds\tr4, r0, r3\n \tmovs\tr2, r5\n-\tstrb\tr6, [r4, r4]\n+\tstrb\tr6, [r5, r4]\n \tmovs\tr2, r5\n-\tcmp\tr3, #196\t@ 0xc4\n+\tcmp\tr3, #208\t@ 0xd0\n \tmovs\tr2, r5\n-\tcmp\tr3, #162\t@ 0xa2\n+\tcmp\tr3, #174\t@ 0xae\n \tmovs\tr2, r5\n-\tcmp\tr3, #132\t@ 0x84\n+\tcmp\tr3, #144\t@ 0x90\n \tmovs\tr2, r5\n-\tcmp\tr6, #10\n+\tcmp\tr6, #22\n \tmovs\tr2, r5\n-\tcmp\tr5, #56\t@ 0x38\n+\tcmp\tr5, #68\t@ 0x44\n \tmovs\tr2, r5\n-\tasrs\tr2, r4, #31\n+\tasrs\tr6, r5, #31\n \tmovs\tr2, r5\n-\tcmp\tr4, #208\t@ 0xd0\n+\tcmp\tr4, #220\t@ 0xdc\n \tmovs\tr2, r5\n-\tcmp\tr5, #38\t@ 0x26\n+\tcmp\tr5, #50\t@ 0x32\n \tmovs\tr2, r5\n-\tcmp\tr4, #20\n+\tcmp\tr4, #32\n \tmovs\tr2, r5\n-\tadds\tr1, #2\n+\tadds\tr1, #14\n \tmovs\tr2, r5\n-\tcmp\tr3, #36\t@ 0x24\n+\tcmp\tr3, #48\t@ 0x30\n \tmovs\tr2, r5\n-\tadds\tr1, #18\n+\tadds\tr1, #30\n \tmovs\tr2, r5\n-\tasrs\tr4, r4, #28\n+\tasrs\tr0, r6, #28\n \tmovs\tr2, r5\n-\tcmp\tr3, #114\t@ 0x72\n+\tcmp\tr3, #126\t@ 0x7e\n \tmovs\tr2, r5\n-\tasrs\tr0, r4, #29\n+\tasrs\tr4, r5, #29\n \tmovs\tr2, r5\n-\tadds\tr0, #178\t@ 0xb2\n+\tadds\tr0, #190\t@ 0xbe\n \tmovs\tr2, r5\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator::vhrap_t*, std::vector::vhrap_t, std::allocator::vhrap_t> > >, __gnu_cxx::__ops::_Val_comp_iter::vhrap_t const&, HashStatistics::vhrap_t const&)> >(__gnu_cxx::__normal_iterator::vhrap_t*, std::vector::vhrap_t, std::allocator::vhrap_t> > >, __gnu_cxx::__ops::_Val_comp_iter::vhrap_t const&, HashStatistics::vhrap_t const&)>):\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tldr\tr2, [pc, #124]\t@ (14e1e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xaa04c>)\n \tldr\tr3, [pc, #128]\t@ (14e1e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xaa050>)\n@@ -652005,19 +652005,19 @@\n \tmovs\tr0, r0\n \tudf\t#240\t@ 0xf0\n \tmovs\tr5, r6\n \tbgt.n\t14f80c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xab674>\n \tmovs\tr5, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #256\t@ (adr r0, 14f8a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xab70c>)\n+\tadd\tr0, pc, #304\t@ (adr r0, 14f8d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xab73c>)\n \tmovs\tr1, r5\n-\tadd\tr0, pc, #240\t@ (adr r0, 14f898 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xab700>)\n+\tadd\tr0, pc, #288\t@ (adr r0, 14f8c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xab730>)\n \tmovs\tr1, r5\n-\t\t\t@ instruction: 0xb67c\n+\t\t\t@ instruction: 0xb684\n \tmovs\tr3, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -653526,47 +653526,47 @@\n \tmovs\tr5, r6\n \tbvc.n\t150214 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xac07c>\n \tmovs\tr5, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr7, #118\t@ 0x76\n+\tadds\tr7, #126\t@ 0x7e\n \tmovs\tr2, r5\n-\tadd\tr3, pc, #64\t@ (adr r3, 150360 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xac1c8>)\n+\tadd\tr3, pc, #112\t@ (adr r3, 150390 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xac1f8>)\n \tmovs\tr1, r5\n-\tadds\tr7, #118\t@ 0x76\n+\tadds\tr7, #126\t@ 0x7e\n \tmovs\tr2, r5\n-\tadds\tr7, #106\t@ 0x6a\n+\tadds\tr7, #114\t@ 0x72\n \tmovs\tr2, r5\n \tlsrs\tr4, r3, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #3\n \tmovs\tr0, r0\n-\tb.n\t15061c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xac484>\n+\tb.n\t150634 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xac49c>\n \tmovs\tr1, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadds\tr2, #230\t@ 0xe6\n+\tadds\tr2, #238\t@ 0xee\n \tmovs\tr2, r5\n-\tstr\tr0, [r7, #72]\t@ 0x48\n+\tstr\tr4, [r0, #76]\t@ 0x4c\n \tmovs\tr1, r5\n \tldmia\tr6, {r2, r3, r6}\n \tmovs\tr5, r6\n-\tadds\tr1, #172\t@ 0xac\n+\tadds\tr1, #180\t@ 0xb4\n \tmovs\tr2, r5\n \tlsrs\tr0, r5, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr1, #98\t@ 0x62\n+\tadds\tr1, #106\t@ 0x6a\n \tmovs\tr2, r5\n Skim::skimStreamPrepare(ReadPool&, unsigned int, unsigned char, char const*):\n ./src/mira/skim.C:3340\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tmov\tr6, r2\n \tmov\tr5, r1\n@@ -655599,19 +655599,19 @@\n \tmovs\tr0, r0\n \tstmia\tr3!, {r5, r6}\n \tmovs\tr5, r6\n \tstmia\tr0!, {r2, r4, r7}\n \tmovs\tr5, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrh\tr4, [r3, #36]\t@ 0x24\n+\tstrh\tr0, [r5, #36]\t@ 0x24\n \tmovs\tr1, r5\n-\tstrh\tr0, [r3, #36]\t@ 0x24\n+\tstrh\tr4, [r4, #36]\t@ 0x24\n \tmovs\tr1, r5\n-\tldr\tr2, [sp, #864]\t@ 0x360\n+\tldr\tr2, [sp, #896]\t@ 0x380\n \tmovs\tr3, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -657120,47 +657120,47 @@\n \tmovs\tr5, r6\n \tcbnz\tr2, 151f34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xadd9c>\n \tmovs\tr5, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr6, r0, r7\n+\tsubs\tr6, r1, r7\n \tmovs\tr2, r5\n-\tstrh\tr0, [r4, #58]\t@ 0x3a\n+\tstrh\tr4, [r5, #58]\t@ 0x3a\n \tmovs\tr1, r5\n-\tsubs\tr6, r0, r7\n+\tsubs\tr6, r1, r7\n \tmovs\tr2, r5\n-\tsubs\tr2, r7, r6\n+\tsubs\tr2, r0, r7\n \tmovs\tr2, r5\n \tlsrs\tr4, r5, #14\n \tmovs\tr0, r0\n \tasrs\tr4, r3, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #24\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r1, r6, r7}\n+\tstmia\tr5!, {r1, r2, r3, r6, r7}\n \tmovs\tr1, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tasrs\tr6, r6, #28\n+\tasrs\tr6, r7, #28\n \tmovs\tr2, r5\n-\tldr\tr1, [pc, #32]\t@ (151f14 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xadd7c>)\n+\tldr\tr1, [pc, #80]\t@ (151f44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xaddac>)\n \tmovs\tr1, r5\n \tuxth\tr4, r3\n \tmovs\tr5, r6\n-\tasrs\tr4, r7, #23\n+\tasrs\tr4, r0, #24\n \tmovs\tr2, r5\n \tlsrs\tr4, r3, #7\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr2, r6, #22\n+\tasrs\tr2, r7, #22\n \tmovs\tr2, r5\n Skim >::skimStreamPrepare(ReadPool&, unsigned int, unsigned char, char const*):\n ./src/mira/skim.C:3340\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tmov\tr6, r2\n \tmov\tr5, r1\n@@ -659137,19 +659137,19 @@\n \tmovs\tr0, r0\n \tadd\tr0, sp, #128\t@ 0x80\n \tmovs\tr5, r6\n \tadd\tr5, pc, #336\t@ (adr r5, 152fdc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xaee44>)\n \tmovs\tr5, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr4, [r3, #20]\n+\tldr\tr0, [r5, #20]\n \tmovs\tr1, r5\n-\tldr\tr0, [r3, #20]\n+\tldr\tr4, [r4, #20]\n \tmovs\tr1, r5\n-\tldrb\tr0, [r3, #30]\n+\tldrb\tr0, [r4, #30]\n \tmovs\tr3, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -660658,45 +660658,45 @@\n \tmovs\tr5, r6\n \tadd\tr0, pc, #584\t@ (adr r0, 153c48 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xafab0>)\n \tmovs\tr5, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr6, r0, #2\n+\tlsls\tr6, r1, #2\n \tmovs\tr2, r5\n-\tldr\tr0, [r4, #64]\t@ 0x40\n+\tldr\tr4, [r5, #64]\t@ 0x40\n \tmovs\tr1, r5\n-\tlsls\tr6, r0, #2\n+\tlsls\tr6, r1, #2\n \tmovs\tr2, r5\n-\tlsls\tr2, r7, #1\n+\tlsls\tr2, r0, #2\n \tmovs\tr2, r5\n \tlsrs\tr0, r5, #16\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #28\n \tmovs\tr0, r0\n \tlsls\tr4, r0, #23\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #520\t@ 0x208\n+\tadd\tr2, sp, #568\t@ 0x238\n \tmovs\tr1, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfbf60029\n-\tcmp\tr5, #200\t@ 0xc8\n+\t\t\t@ instruction: 0xfbfe0029\n+\tcmp\tr5, #212\t@ 0xd4\n \tmovs\tr1, r5\n \tstr\tr7, [sp, #368]\t@ 0x170\n \tmovs\tr5, r6\n-\t\t\t@ instruction: 0xfabc0029\n+\t\t\t@ instruction: 0xfac40029\n \tlsrs\tr0, r1, #3\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa720029\n+\t\t\t@ instruction: 0xfa7a0029\n Skim >::skimStreamPrepare(ReadPool&, unsigned int, unsigned char, char const*):\n ./src/mira/skim.C:3340\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tmov\tr6, r2\n \tmov\tr5, r1\n \tmov\tr7, r3\n@@ -662684,19 +662684,19 @@\n \tmovs\tr0, r0\n \tldrh\tr4, [r5, #38]\t@ 0x26\n \tmovs\tr5, r6\n \tldrh\tr0, [r4, #16]\n \tmovs\tr5, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #160]\t@ (154a68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb08d0>)\n+\tldr\tr6, [pc, #208]\t@ (154a98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb0900>)\n \tmovs\tr1, r5\n-\tldr\tr6, [pc, #144]\t@ (154a5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb08c4>)\n+\tldr\tr6, [pc, #192]\t@ (154a8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb08f4>)\n \tmovs\tr1, r5\n-\tstr\tr4, [r4, #68]\t@ 0x44\n+\tstr\tr4, [r5, #68]\t@ 0x44\n \tmovs\tr3, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -664205,47 +664205,47 @@\n \tmovs\tr5, r6\n \tstrh\tr6, [r3, #42]\t@ 0x2a\n \tmovs\tr5, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t154fe0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb0e48>\n+\tb.n\t154ff0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb0e58>\n \tmovs\tr1, r5\n-\tstr\tr0, [r5, r3]\n+\tstr\tr4, [r6, r3]\n \tmovs\tr1, r5\n-\tb.n\t154fe8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb0e50>\n+\tb.n\t154ff8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb0e60>\n \tmovs\tr1, r5\n-\tb.n\t154fd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb0e3c>\n+\tb.n\t154fe4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb0e4c>\n \tmovs\tr1, r5\n \tlsrs\tr4, r6, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #8\n \tmovs\tr0, r0\n \tlsls\tr0, r6, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r1, #58]\t@ 0x3a\n+\tldrh\tr6, [r2, #58]\t@ 0x3a\n \tmovs\tr1, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tb.n\t1556e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb154c>\n+\tb.n\t1556f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb155c>\n \tmovs\tr1, r5\n-\tasrs\tr0, r2, #10\n+\tasrs\tr4, r3, #10\n \tmovs\tr1, r5\n \tldrb\tr4, [r4, #16]\n \tmovs\tr5, r6\n-\tsvc\t132\t@ 0x84\n+\tsvc\t140\t@ 0x8c\n \tmovs\tr1, r5\n \tlsls\tr0, r6, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsvc\t58\t@ 0x3a\n+\tsvc\t66\t@ 0x42\n \tmovs\tr1, r5\n Skim >::skimStreamPrepare(ReadPool&, unsigned int, unsigned char, char const*):\n ./src/mira/skim.C:3340\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tmov\tr6, r2\n \tmov\tr5, r1\n@@ -664584,15 +664584,15 @@\n \tstmia.w\tr4, {r0, r1}\n \tb.n\t15566c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb14d4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1558d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb1738>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tasrs\tr4, r3, #13\n+\tasrs\tr0, r5, #13\n \tmovs\tr1, r5\n void std::__push_heap<__gnu_cxx::__normal_iterator::vhrap_t, int>*, std::vector::vhrap_t, int>, std::allocator::vhrap_t, int> > > >, int, std::pair::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse::vhrap_t, int, bool (*)(HashStatistics::vhrap_t const&, HashStatistics::vhrap_t const&)> > >(__gnu_cxx::__normal_iterator::vhrap_t, int>*, std::vector::vhrap_t, int>, std::allocator::vhrap_t, int> > > >, int, int, std::pair::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse::vhrap_t, int, bool (*)(HashStatistics::vhrap_t const&, HashStatistics::vhrap_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tsubs\tr5, r1, #1\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -665264,15 +665264,15 @@\n \tstmia.w\tr4, {r0, r1, r2, r3}\n \tb.n\t155c1e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb1a86>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (155e40 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb1ca8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tlsrs\tr4, r5, #23\n+\tlsrs\tr0, r7, #23\n \tmovs\tr1, r5\n void std::__push_heap<__gnu_cxx::__normal_iterator >::vhrap_t, int>*, std::vector >::vhrap_t, int>, std::allocator >::vhrap_t, int> > > >, int, std::pair >::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::vhrap_t, int, bool (*)(HashStatistics >::vhrap_t const&, HashStatistics >::vhrap_t const&)> > >(__gnu_cxx::__normal_iterator >::vhrap_t, int>*, std::vector >::vhrap_t, int>, std::allocator >::vhrap_t, int> > > >, int, int, std::pair >::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::vhrap_t, int, bool (*)(HashStatistics >::vhrap_t const&, HashStatistics >::vhrap_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tsubs\tr5, r1, #1\n /usr/include/c++/10/bits/stl_iterator.h:1042\n@@ -665783,15 +665783,15 @@\n \tmovw\tr7, #65504\t@ 0xffe0\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t1561c2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb202a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (156260 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb20c8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsrs\tr2, r1, #7\n+\tlsrs\tr6, r2, #7\n \tmovs\tr1, r5\n void std::__push_heap<__gnu_cxx::__normal_iterator >::vhrap_t, int>*, std::vector >::vhrap_t, int>, std::allocator >::vhrap_t, int> > > >, int, std::pair >::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::vhrap_t, int, bool (*)(HashStatistics >::vhrap_t const&, HashStatistics >::vhrap_t const&)> > >(__gnu_cxx::__normal_iterator >::vhrap_t, int>*, std::vector >::vhrap_t, int>, std::allocator >::vhrap_t, int> > > >, int, int, std::pair >::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::vhrap_t, int, bool (*)(HashStatistics >::vhrap_t const&, HashStatistics >::vhrap_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1042\n \tmov.w\tr9, #48\t@ 0x30\n /usr/include/c++/10/bits/stl_heap.h:138\n@@ -666348,15 +666348,15 @@\n \tadd.w\tr5, fp, #160\t@ 0xa0\n \tblx\tb678 \n \tb.n\t15650e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb2376>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1566b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xb251c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsls\tr6, r6, #21\n+\tlsls\tr2, r0, #22\n \tmovs\tr1, r5\n void std::__push_heap<__gnu_cxx::__normal_iterator >::vhrap_t, int>*, std::vector >::vhrap_t, int>, std::allocator >::vhrap_t, int> > > >, int, std::pair >::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::vhrap_t, int, bool (*)(HashStatistics >::vhrap_t const&, HashStatistics >::vhrap_t const&)> > >(__gnu_cxx::__normal_iterator >::vhrap_t, int>*, std::vector >::vhrap_t, int>, std::allocator >::vhrap_t, int> > > >, int, int, std::pair >::vhrap_t, int>, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >::vhrap_t, int, bool (*)(HashStatistics >::vhrap_t const&, HashStatistics >::vhrap_t const&)> >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1042\n \tmov.w\tr9, #80\t@ 0x50\n /usr/include/c++/10/bits/stl_heap.h:138\n@@ -760641,15 +760641,15 @@\n \tblx\tb1f0 \n \tcbz\tr0, 183efa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xdfd62>\n \tmovs\tr4, #0\n ./src/mira/../../src/util/fileanddisk.H:149\n \tmov\tr0, r4\n \tpop\t{r3, r4, r5, pc}\n \tnop\n-\tstrb\tr6, [r3, r7]\n+\tstrb\tr2, [r5, r7]\n \tmovs\tr6, r4\n std::__cxx11::basic_string, std::allocator >::operator=(std::__cxx11::basic_string, std::allocator >&&) [clone .isra.0]:\n /usr/include/c++/10/bits/basic_string.h:703\n \tpush\t{r3, r4, r5, lr}\n /usr/include/c++/10/bits/basic_string.h:187\n \tmov\tr3, r1\n /usr/include/c++/10/bits/basic_string.h:703\n@@ -761143,15 +761143,15 @@\n /usr/include/c++/10/bits/vector.tcc:335\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, pc}\n /usr/include/c++/10/bits/stl_vector.h:1770\n \tldr\tr0, [pc, #8]\t@ (1841f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0060>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr2, #80\t@ 0x50\n+\tcmp\tr2, #92\t@ 0x5c\n \tmovs\tr6, r4\n std::vector >::operator=(std::vector > const&) [clone .isra.0]:\n /usr/include/c++/10/bits/vector.tcc:201\n \tcmp\tr1, r0\n \tbeq.n\t1842b2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe011a>\n /usr/include/c++/10/bits/vector.tcc:198\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n@@ -762060,28 +762060,28 @@\n \tmovs\tr2, r6\n \tstrh\tr2, [r1, #60]\t@ 0x3c\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r3, #2\n \tmovs\tr0, r0\n-\tvhadd.s32\td16, d2, d22\n-\tvaddl.s8\tq0, d4, d22\n-\tvext.8\td0, d10, d22, #0\n+\tvhadd.s32\td16, d10, d22\n+\tvaddl.s8\tq0, d12, d22\n+\tvaddl.s8\tq8, d2, d22\n \tstrh\tr2, [r2, #50]\t@ 0x32\n \tmovs\tr2, r6\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstc\t0, cr0, [r8, #152]!\t@ 0x98\n-\tstcl\t0, cr0, [r2, #-152]!\t@ 0xffffff68\n-\tldcl\t0, cr0, [r0, #-152]!\t@ 0xffffff68\n+\tldc\t0, cr0, [r0, #152]!\t@ 0x98\n+\tstcl\t0, cr0, [sl, #-152]!\t@ 0xffffff68\n \tldcl\t0, cr0, [r8, #-152]!\t@ 0xffffff68\n+\tstc\t0, cr0, [r0, #152]\t@ 0x98\n \tasrs\tr4, r4, #13\n \tmovs\tr6, r4\n-\teors\tr4, r3\n+\teors\tr0, r5\n \tmovs\tr6, r4\n Assembly::checkTerminationRequest():\n ./src/mira/assembly.C:1036\n \tldr\tr2, [pc, #772]\t@ (184e08 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0c70>)\n \tldr\tr3, [pc, #776]\t@ (184e0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0c74>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -762531,30 +762531,30 @@\n \tb.n\t184da2 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0c0a>\n \tb.n\t184de4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0c4c>\n \tnop\n \tstrh\tr4, [r3, #34]\t@ 0x22\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstcl\t0, cr0, [r0], {38}\t@ 0x26\n+\tstcl\t0, cr0, [r8], {38}\t@ 0x26\n \tstrh\tr4, [r6, #30]\n \tmovs\tr2, r6\n-\tmrrc\t0, 2, r0, r6, cr6\n-\tstc\t0, cr0, [r2], #-152\t@ 0xffffff68\n-\tbic.w\tr0, r2, #41\t@ 0x29\n-\tsbcs.w\tr0, r0, r6, asr #32\n-\tsubs\tr5, #140\t@ 0x8c\n+\tmrrc\t0, 2, r0, lr, cr6\n+\tstc\t0, cr0, [sl], #-152\t@ 0xffffff68\n+\tbic.w\tr0, sl, #41\t@ 0x29\n+\tsbcs.w\tr0, r8, r6, asr #32\n+\tsubs\tr5, #152\t@ 0x98\n \tmovs\tr6, r4\n-\tsubs\tr5, #128\t@ 0x80\n+\tsubs\tr5, #140\t@ 0x8c\n \tmovs\tr6, r4\n-\tsubs\tr5, #120\t@ 0x78\n+\tsubs\tr5, #132\t@ 0x84\n \tmovs\tr6, r4\n-\tsubs\tr5, #112\t@ 0x70\n+\tsubs\tr5, #124\t@ 0x7c\n \tmovs\tr6, r4\n-\tsubs\tr5, #104\t@ 0x68\n+\tsubs\tr5, #116\t@ 0x74\n \tmovs\tr6, r4\n Assembly::priv_calcBasesPerHashOnPass(unsigned int) const:\n ./src/mira/assembly.C:1647\n \tcbz\tr1, 184e40 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0ca8>\n ./src/mira/assembly.C:1647 (discriminator 1)\n \tsubs\tr1, #1\n /usr/include/c++/10/bits/stl_vector.h:1064\n@@ -762699,22 +762699,22 @@\n \tit\tne\n \tmovne\tr0, #1\n \tpop\t{r3, r4, r5, r6, r7, pc}\n \tstrh\tr6, [r7, #6]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe9b80026\n-\tstrd\tr0, r0, [r2, #152]\t@ 0x98\n-\t\t\t@ instruction: 0xe9be0026\n-\tstrd\tr0, r0, [r4, #152]\t@ 0x98\n+\tstrd\tr0, r0, [r0, #152]\t@ 0x98\n+\tstrd\tr0, r0, [sl, #152]\t@ 0x98\n+\tstrd\tr0, r0, [r6, #152]\t@ 0x98\n+\tstrd\tr0, r0, [ip, #152]\t@ 0x98\n+\t\t\t@ instruction: 0xe9b40026\n+\t\t\t@ instruction: 0xe9b00026\n \t\t\t@ instruction: 0xe9ac0026\n-\t\t\t@ instruction: 0xe9a80026\n-\t\t\t@ instruction: 0xe9a40026\n-\t\t\t@ instruction: 0xe99a0026\n+\t\t\t@ instruction: 0xe9a20026\n Assembly::refreshContigAndReadpoolValuesAfterLoading(ReadPool&, std::__cxx11::list >&, unsigned char):\n ./src/mira/assembly.C:3435\n \tpush\t{r4, r5, lr}\n \tmov\tr3, r2\n \tldr\tr4, [pc, #140]\t@ (185000 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0e68>)\n \tldr.w\tip, [pc, #144]\t@ 185004 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0e6c>\n \tsub\tsp, #68\t@ 0x44\n@@ -762787,15 +762787,15 @@\n \tnop\n \tldrb\tr0, [r5, #31]\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr0, [r7, #30]\n \tmovs\tr2, r6\n-\tldrd\tr0, r0, [lr], #152\t@ 0x98\n+\tstmdb\tr6, {r1, r2, r5}\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n \tmov\tr4, r0\n@@ -764864,80 +764864,80 @@\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r1, #4]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t18647c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe22e4>\n+\tb.n\t18648c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe22f4>\n \tmovs\tr6, r4\n-\tb.n\t186638 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe24a0>\n-\tmovs\tr6, r4\n-\tb.n\t186504 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe236c>\n-\tmovs\tr6, r4\n-\tb.n\t186528 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2390>\n+\tb.n\t186648 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe24b0>\n \tmovs\tr6, r4\n \tb.n\t186514 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe237c>\n \tmovs\tr6, r4\n+\tb.n\t186538 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23a0>\n+\tmovs\tr6, r4\n \tb.n\t186524 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe238c>\n \tmovs\tr6, r4\n-\tb.n\t186564 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23cc>\n+\tb.n\t186534 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe239c>\n+\tmovs\tr6, r4\n+\tb.n\t186574 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23dc>\n \tmovs\tr6, r4\n-\tb.n\t185fe4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1e4c>\n+\tb.n\t185ff4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1e5c>\n \tmovs\tr1, r5\n-\tb.n\t186534 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe239c>\n+\tb.n\t186544 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23ac>\n \tmovs\tr6, r4\n-\tb.n\t186530 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2398>\n+\tb.n\t186540 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23a8>\n \tmovs\tr6, r4\n-\tb.n\t186504 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe236c>\n+\tb.n\t186514 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe237c>\n \tmovs\tr6, r4\n-\t\t\t@ instruction: 0xfbfc0028\n-\tb.n\t1864d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2340>\n+\tstc2\t0, cr0, [r4], {40}\t@ 0x28\n+\tb.n\t1864e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2350>\n \tmovs\tr6, r4\n-\tb.n\t186500 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2368>\n+\tb.n\t186510 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2378>\n \tmovs\tr6, r4\n-\tb.n\t1864ec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2354>\n+\tb.n\t1864fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2364>\n \tmovs\tr6, r4\n-\tb.n\t1864d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe233c>\n+\tb.n\t1864e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe234c>\n \tmovs\tr6, r4\n-\tb.n\t186438 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe22a0>\n+\tb.n\t186448 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe22b0>\n \tmovs\tr6, r4\n-\tb.n\t18638c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe21f4>\n+\tb.n\t18639c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2204>\n \tmovs\tr6, r4\n-\tb.n\t1862c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe212c>\n+\tb.n\t1862d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe213c>\n \tmovs\tr6, r4\n-\tb.n\t1861f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2058>\n+\tb.n\t186200 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2068>\n \tmovs\tr6, r4\n-\tb.n\t1861f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe205c>\n+\tb.n\t186204 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe206c>\n \tmovs\tr6, r4\n-\tb.n\t1860dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1f44>\n+\tb.n\t1860ec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1f54>\n \tmovs\tr6, r4\n-\tb.n\t185fc4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1e2c>\n+\tb.n\t185fd4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1e3c>\n \tmovs\tr6, r4\n-\tb.n\t185f34 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1d9c>\n+\tb.n\t185f44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1dac>\n \tmovs\tr6, r4\n-\tsvc\t220\t@ 0xdc\n+\tsvc\t228\t@ 0xe4\n \tmovs\tr6, r4\n-\tsvc\t148\t@ 0x94\n+\tsvc\t156\t@ 0x9c\n \tmovs\tr6, r4\n-\tsvc\t96\t@ 0x60\n+\tsvc\t104\t@ 0x68\n \tmovs\tr6, r4\n-\tsvc\t42\t@ 0x2a\n+\tsvc\t50\t@ 0x32\n \tmovs\tr6, r4\n-\tudf\t#248\t@ 0xf8\n+\tsvc\t0\n \tmovs\tr6, r4\n-\tudf\t#182\t@ 0xb6\n+\tudf\t#190\t@ 0xbe\n \tmovs\tr6, r4\n-\tudf\t#118\t@ 0x76\n+\tudf\t#126\t@ 0x7e\n \tmovs\tr6, r4\n-\tudf\t#72\t@ 0x48\n+\tudf\t#80\t@ 0x50\n \tmovs\tr6, r4\n-\tudf\t#20\n+\tudf\t#28\n \tmovs\tr6, r4\n-\tble.n\t185ecc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1d34>\n+\tble.n\t185edc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1d44>\n \tmovs\tr6, r4\n /usr/include/c++/10/bits/stl_bvector.h:187\n \tmov\tr2, r7\n /usr/include/c++/10/bits/stl_bvector.h:154\n \tcmp\tr1, #31\n ./src/mira/../../src/util/memusage.H:272\n \tsub.w\tr3, r2, #20\n@@ -766024,50 +766024,50 @@\n \tmovs\tr3, #1\n /usr/include/c++/10/bits/stl_bvector.h:226\n \tmov\tr1, r3\n \tb.n\t18616a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe1fd2>\n /usr/include/c++/10/ostream:611\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n-\tbgt.n\t18657c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23e4>\n+\tbgt.n\t18658c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23f4>\n \tmovs\tr6, r4\n-\tbgt.n\t186510 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2378>\n+\tbgt.n\t186520 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2388>\n \tmovs\tr6, r4\n-\tbgt.n\t186680 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe24e8>\n+\tbgt.n\t186690 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe24f8>\n \tmovs\tr6, r4\n-\tbgt.n\t186600 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2468>\n+\tbgt.n\t186610 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2478>\n \tmovs\tr6, r4\n-\tblt.n\t186514 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe237c>\n+\tblt.n\t186524 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe238c>\n \tmovs\tr6, r4\n-\tblt.n\t18662c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2494>\n+\tblt.n\t18663c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe24a4>\n \tmovs\tr6, r4\n-\tbge.n\t18659c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2404>\n+\tbge.n\t1865ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2414>\n \tmovs\tr6, r4\n-\tbge.n\t186520 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2388>\n+\tbge.n\t186530 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2398>\n \tmovs\tr6, r4\n-\tbge.n\t1866a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe250c>\n+\tbge.n\t1866b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe251c>\n \tmovs\tr6, r4\n-\tbge.n\t18664c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe24b4>\n+\tbge.n\t18665c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe24c4>\n \tmovs\tr6, r4\n-\tbls.n\t1865f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2460>\n+\tbls.n\t186608 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2470>\n \tmovs\tr6, r4\n-\tbls.n\t1865a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2410>\n+\tbls.n\t1865b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2420>\n \tmovs\tr6, r4\n-\tbls.n\t186588 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23f0>\n+\tbls.n\t186598 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2400>\n \tmovs\tr6, r4\n-\tbls.n\t18658c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe23f4>\n+\tbls.n\t18659c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2404>\n \tmovs\tr6, r4\n-\tvaddl.s16\tq0, d10, d24\n-\tlsls\tr0, r6, #2\n+\tvaddl.s32\tq0, d2, d24\n+\tlsls\tr0, r7, #2\n \tmovs\tr1, r5\n \tldr\tr2, [r1, #56]\t@ 0x38\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbls.n\t186714 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe257c>\n+\tbls.n\t186724 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe258c>\n \tmovs\tr6, r4\n Assembly::checkForNFSMountOnTmpDir():\n ./src/mira/assembly.C:701\n \tldr\tr2, [pc, #340]\t@ (186788 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25f0>)\n \tldr\tr3, [pc, #344]\t@ (18678c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25f4>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -766256,27 +766256,27 @@\n \tmovs\tr0, r0\n \tldr\tr2, [r4, #16]\n \tmovs\tr2, r6\n \tldr\tr6, [r1, #16]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbvc.n\t1866d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2538>\n+\tbvc.n\t1866e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2548>\n \tmovs\tr6, r4\n-\tbvc.n\t18675c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25c4>\n+\tbvc.n\t18676c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25d4>\n \tmovs\tr6, r4\n-\tbvs.n\t186770 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25d8>\n+\tbvs.n\t186780 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25e8>\n \tmovs\tr6, r4\n-\tbvc.n\t1867b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2620>\n+\tbvc.n\t1867c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2630>\n \tmovs\tr6, r4\n-\tbvs.n\t1867a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2608>\n+\tbvc.n\t1867b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2618>\n \tmovs\tr6, r4\n-\tbls.n\t186764 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25cc>\n+\tbls.n\t186774 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25dc>\n \tmovs\tr6, r4\n-\tbls.n\t18678c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe25f4>\n+\tbls.n\t18679c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2604>\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::buildFileName(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly.C:568\n@@ -766750,19 +766750,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr4, [sp, #112]\t@ 0x70\n+\tldr\tr4, [sp, #144]\t@ 0x90\n \tmovs\tr7, r4\n \tstr\tr2, [r3, #84]\t@ 0x54\n \tmovs\tr2, r6\n-\teors\tr0, r1\n+\teors\tr4, r2\n \tmovs\tr6, r4\n /usr/include/c++/10/bits/basic_string.h:6473\n \tldr\tr1, [r0, #0]\n \tmov\tr0, r7\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #212]\t@ (186c1c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2a84>)\n@@ -766880,15 +766880,15 @@\n \tldr.w\tr1, [sl, #16]\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t186bfa , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2a62>\n \tnop\n-\tsubs\tr7, #252\t@ 0xfc\n+\tands\tr0, r1\n \tmovs\tr6, r4\n Assembly::saveResumeDataFPO(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly.C:2044\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1080]\t@ 187060 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2ec8>\n \tsub\tsp, #212\t@ 0xd4\n@@ -767570,31 +767570,31 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t18703e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2ea6>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr2, [r2, #48]\t@ 0x30\n \tmovs\tr2, r6\n-\tmovs\tr7, #224\t@ 0xe0\n+\tmovs\tr7, #236\t@ 0xec\n \tmovs\tr6, r4\n-\tstrb\tr4, [r1, #2]\n+\tstrb\tr4, [r2, #2]\n \tmovs\tr7, r4\n-\tb.n\t1877dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe3644>\n+\tb.n\t1877ec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe3654>\n \tmovs\tr6, r4\n-\tbmi.n\t187098 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2f00>\n+\tbmi.n\t1870a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2f10>\n \tmovs\tr6, r4\n-\tstrb\tr4, [r4, #1]\n+\tstrb\tr4, [r5, #1]\n \tmovs\tr7, r4\n-\tldr\tr4, [r0, #120]\t@ 0x78\n+\tldr\tr4, [r1, #120]\t@ 0x78\n \tmovs\tr7, r4\n-\tb.n\t1875e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe3448>\n+\tb.n\t1875f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe3458>\n \tmovs\tr6, r4\n-\tbcc.n\t187090 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2ef8>\n+\tbcc.n\t1870a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2f08>\n \tmovs\tr6, r4\n-\tldr\tr6, [r3, #116]\t@ 0x74\n+\tldr\tr6, [r4, #116]\t@ 0x74\n \tmovs\tr7, r4\n \tstr\tr4, [r7, #0]\n \tmovs\tr2, r6\n Assembly::fpo_buildFileNames(int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly.C:2812\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n@@ -768514,57 +768514,57 @@\n \tb.n\t18764a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe34b2>\n \tb.n\t18768c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe34f4>\n \tnop\n \tldrsh\tr2, [r0, r3]\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tsubs\tr6, r3, r6\n+\tsubs\tr6, r4, r6\n \tmovs\tr0, r5\n-\tbeq.n\t1877bc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe3624>\n+\tbeq.n\t1877cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe3634>\n \tmovs\tr6, r4\n-\tldr\tr2, [r0, #76]\t@ 0x4c\n+\tldr\tr2, [r1, #76]\t@ 0x4c\n \tmovs\tr7, r4\n-\tstr??.w\tr0, [r8, #37]\t@ 0x25\n-\tldmia\tr7, {r2, r4, r6, r7}\n+\tldr??.w\tr0, [r4, #37]\t@ 0x25\n+\tldmia\tr7, {r2, r3, r4, r6, r7}\n \tmovs\tr6, r4\n-\tldr\tr4, [r5, #64]\t@ 0x40\n+\tldr\tr4, [r6, #64]\t@ 0x40\n \tmovs\tr7, r4\n-\tsubs\tr6, r6, r0\n+\tsubs\tr6, r7, r0\n \tmovs\tr0, r5\n-\tldmia\tr7!, {r1, r2, r4}\n+\tldmia\tr7!, {r1, r2, r3, r4}\n \tmovs\tr6, r4\n-\tldr\tr6, [r4, #52]\t@ 0x34\n+\tldr\tr6, [r5, #52]\t@ 0x34\n \tmovs\tr7, r4\n-\t\t\t@ instruction: 0xf7a00025\n-\tldmia\tr6!, {r2, r4, r7}\n+\t\t\t@ instruction: 0xf7ac0025\n+\tldmia\tr6!, {r2, r3, r4, r7}\n \tmovs\tr6, r4\n-\tldr\tr4, [r4, #44]\t@ 0x2c\n+\tldr\tr4, [r5, #44]\t@ 0x2c\n \tmovs\tr7, r4\n-\tadds\tr4, r5, r4\n+\tadds\tr4, r6, r4\n \tmovs\tr0, r5\n-\tldmia\tr6!, {r1, r2}\n+\tldmia\tr6!, {r1, r2, r3}\n \tmovs\tr6, r4\n-\tldr\tr4, [r3, #36]\t@ 0x24\n+\tldr\tr4, [r4, #36]\t@ 0x24\n \tmovs\tr7, r4\n-\tmovw\tr0, #34853\t@ 0x8825\n-\tldmia\tr5, {r1, r4, r5}\n+\t\t\t@ instruction: 0xf6540025\n+\tldmia\tr5, {r1, r3, r4, r5}\n \tmovs\tr6, r4\n-\tldr\tr2, [r1, #24]\n+\tldr\tr2, [r2, #24]\n \tmovs\tr7, r4\n-\tasrs\tr2, r2, #31\n+\tasrs\tr2, r3, #31\n \tmovs\tr0, r5\n-\tldmia\tr4, {r2, r4, r5, r7}\n+\tldmia\tr4, {r2, r3, r4, r5, r7}\n \tmovs\tr6, r4\n-\tldr\tr6, [r0, #16]\n+\tldr\tr6, [r1, #16]\n \tmovs\tr7, r4\n-\tadc.w\tr0, r2, #10813440\t@ 0xa50000\n-\tldmia\tr4, {r3, r4, r5}\n+\tadc.w\tr0, lr, #10813440\t@ 0xa50000\n+\tldmia\tr4!, {r6}\n \tmovs\tr6, r4\n-\tldr\tr2, [r1, #8]\n+\tldr\tr2, [r2, #8]\n \tmovs\tr7, r4\n \tldr\tr0, [r2, r7]\n \tmovs\tr2, r6\n Assembly::test():\n ./src/mira/assembly.C:78\n \tldr\tr2, [pc, #296]\t@ (187864 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe36cc>)\n \tldr\tr3, [pc, #300]\t@ (187868 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe36d0>)\n@@ -768731,19 +768731,19 @@\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr4, [r2, r0]\n \tmovs\tr2, r6\n \tldrsb\tr4, [r6, r7]\n \tmovs\tr2, r6\n-\tadds\tr6, r5, #5\n+\tadds\tr2, r7, #5\n \tmovs\tr6, r4\n-\tadds\tr2, r5, #5\n+\tadds\tr6, r6, #5\n \tmovs\tr6, r4\n-\tadds\tr3, #166\t@ 0xa6\n+\tadds\tr3, #174\t@ 0xae\n \tmovs\tr0, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -769325,17 +769325,17 @@\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsb\tr0, [r7, r2]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r1, r2, r5, r7}\n+\tldmia\tr0!, {r1, r2, r3, r5, r7}\n \tmovs\tr6, r4\n-\tldmia\tr0!, {r1, r3, r4, r5, r6}\n+\tldmia\tr0!, {r1, r7}\n \tmovs\tr6, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tstrb\tr6, [r7, r3]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -769345,28 +769345,28 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr4, r2, r6\n+\tadds\tr0, r4, r6\n \tmovs\tr6, r4\n-\tadds\tr0, r2, r6\n+\tadds\tr4, r3, r6\n \tmovs\tr6, r4\n-\tcmp\tr7, #208\t@ 0xd0\n+\tcmp\tr7, #216\t@ 0xd8\n \tmovs\tr0, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tvaddl.s32\tq8, d2, d21\n-\tvaddl.s32\tq8, d0, d21\n+\tvaddl.s32\tq8, d14, d21\n+\tvaddl.s32\tq8, d12, d21\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n Assembly::transferContigReadsToReadpool(Contig const&, std::__cxx11::list >&, int):\n ./src/mira/assembly.C:2391\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr4, [pc, #1032]\t@ 18817c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe3fe4>\n \tsub\tsp, #396\t@ 0x18c\n@@ -769913,43 +769913,43 @@\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r3, r7]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r4, r5, r6, r7}\n+\tstmia\tr3!, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr6, r4\n \tstr\tr6, [r7, r1]\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tasrs\tr4, r0, #23\n+\tasrs\tr0, r2, #23\n \tmovs\tr6, r4\n-\tasrs\tr0, r0, #23\n+\tasrs\tr4, r1, #23\n \tmovs\tr6, r4\n-\tcmp\tr4, #0\n+\tcmp\tr4, #8\n \tmovs\tr0, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr6, r5, #20\n+\tasrs\tr2, r7, #20\n \tmovs\tr6, r4\n-\tasrs\tr2, r5, #20\n+\tasrs\tr6, r6, #20\n \tmovs\tr6, r4\n-\tcmp\tr3, #106\t@ 0x6a\n+\tcmp\tr3, #114\t@ 0x72\n \tmovs\tr0, r5\n-\tasrs\tr6, r2, #18\n+\tasrs\tr2, r4, #18\n \tmovs\tr6, r4\n-\tasrs\tr2, r2, #18\n+\tasrs\tr6, r3, #18\n \tmovs\tr6, r4\n-\tcmp\tr2, #204\t@ 0xcc\n+\tcmp\tr2, #212\t@ 0xd4\n \tmovs\tr0, r5\n Assembly::getRead(unsigned int):\n ./src/mira/assembly.C:3412\n \tldr\tr2, [pc, #252]\t@ (1882c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4130>)\n \tldr\tr3, [pc, #256]\t@ (1882cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4134>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -770092,24 +770092,24 @@\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr5, [pc, #472]\t@ (1884ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4314>)\n \tmovs\tr2, r6\n \tldr\tr5, [pc, #408]\t@ (188470 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe42d8>)\n \tmovs\tr2, r6\n-\titee\tls\n+\titte\tls\n \tmovls\tr6, r4\n-\titte\thi\t@ unpredictable \n+\titee\thi\t@ unpredictable \n \tmovhi\tr6, r4\n-\tnophi\t{9}\n+\tit\tls\t@ unpredictable \n \tmovls\tr6, r4\n-\titte\tvc\n-\tmovvc\tr6, r4\n-\tlsrvc\tr0, r0, #18\n-\tmovvs\tr0, r0\n+\tittt\thi\n+\tmovhi\tr6, r4\n+\tlsrhi\tr0, r0, #18\n+\tmovhi\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::makeNewReadPoolFromContigs():\n ./src/mira/assembly.C:2213\n \tldr.w\tr2, [pc, #1100]\t@ 188740 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe45a8>\n \tldr.w\tr3, [pc, #1100]\t@ 188744 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe45ac>\n \tadd\tr2, pc\n@@ -770666,25 +770666,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tudf\t#194\t@ 0xc2\n+\tudf\t#202\t@ 0xca\n \tmovs\tr6, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldr\tr1, [pc, #312]\t@ (1888ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4714>)\n \tmovs\tr2, r6\n-\tble.n\t188840 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe46a8>\n+\tble.n\t188850 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe46b8>\n \tmovs\tr6, r4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr9, sp, #120\t@ 0x78\n \tmov\tr8, r0\n \tmov\tr0, r9\n \tldr\tr7, [sp, #4]\n \tmov\tsl, r1\n@@ -770998,31 +770998,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr4, r4, #19\n+\tlsrs\tr0, r6, #19\n \tmovs\tr6, r4\n-\tlsrs\tr0, r4, #19\n+\tlsrs\tr4, r5, #19\n \tmovs\tr6, r4\n-\tmovs\tr3, #32\n+\tmovs\tr3, #40\t@ 0x28\n \tmovs\tr0, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr0, r7, #14\n+\tlsrs\tr4, r0, #15\n \tmovs\tr6, r4\n-\tlsrs\tr4, r6, #14\n+\tlsrs\tr0, r0, #15\n \tmovs\tr6, r4\n-\tmovs\tr1, #240\t@ 0xf0\n+\tmovs\tr1, #248\t@ 0xf8\n \tmovs\tr0, r5\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr4, [pc, #852]\t@ (188d68 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4bd0>)\n \tadd.w\tr9, sp, #120\t@ 0x78\n \tldr\tr7, [sp, #4]\n \tmov.w\tsl, #0\n \tstr\tr0, [sp, #0]\n@@ -771460,35 +771460,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbls.n\t188c94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4afc>\n+\tbls.n\t188ca4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4b0c>\n \tmovs\tr6, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr6, r1, #5\n+\tlsrs\tr2, r3, #5\n \tmovs\tr6, r4\n-\tlsrs\tr2, r1, #5\n+\tlsrs\tr6, r2, #5\n \tmovs\tr6, r4\n-\tsubs\tr2, r1, #6\n+\tsubs\tr2, r2, #6\n \tmovs\tr0, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr4, r4, #32\n+\tlsrs\tr0, r6, #32\n \tmovs\tr6, r4\n-\tlsrs\tr0, r4, #32\n+\tlsrs\tr4, r5, #32\n \tmovs\tr6, r4\n-\tsubs\tr4, r3, #1\n+\tsubs\tr4, r4, #1\n \tmovs\tr0, r5\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr4, [pc, #796]\t@ (1890c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4f30>)\n \tadd.w\tr9, sp, #120\t@ 0x78\n \tldr\tr7, [sp, #4]\n \tmov\tr0, r9\n \tmov\tsl, r2\n@@ -771906,37 +771906,37 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr0, r6, #26\n+\tlsls\tr4, r7, #26\n \tmovs\tr6, r4\n-\tlsls\tr4, r5, #26\n+\tlsls\tr0, r7, #26\n \tmovs\tr6, r4\n-\tadds\tr4, r5, #3\n+\tadds\tr4, r6, #3\n \tmovs\tr0, r5\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr6, r0, #22\n+\tlsls\tr2, r2, #22\n \tmovs\tr6, r4\n-\tlsls\tr2, r0, #22\n+\tlsls\tr6, r1, #22\n \tmovs\tr6, r4\n-\tsubs\tr6, r7, r6\n+\tsubs\tr6, r0, r7\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsxtb\tr4, r5\n+\tsxtb\tr4, r6\n \tmovs\tr6, r4\n-\tcbz\tr0, 189134 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4f9c>\n+\tcbz\tr0, 189136 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe4f9e>\n \tmovs\tr6, r4\n /usr/include/c++/10/ostream:611\n \tldr\tr4, [pc, #728]\t@ (1893e8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe5250>)\n \tmovs\tr2, #19\n \tldr\tr7, [sp, #4]\n ./src/mira/assembly.C:2235\n \tadd\tr6, sp, #56\t@ 0x38\n@@ -772329,25 +772329,25 @@\n \tb.n\t189274 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe50dc>\n /usr/include/c++/10/sstream:584\n \tmov\tr0, fp\n \tb.n\t189300 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe5168>\n \tb.n\t1892ba , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe5122>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcbz\tr0, 189402 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe526a>\n+\tcbz\tr0, 189404 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe526c>\n \tmovs\tr6, r4\n-\tsub\tsp, #64\t@ 0x40\n+\tsub\tsp, #96\t@ 0x60\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tsp, #248\t@ 0xf8\n+\tadd\tsp, #280\t@ 0x118\n \tmovs\tr6, r4\n-\tadd\tr7, sp, #992\t@ 0x3e0\n+\tadd\tsp, #0\n \tmovs\tr6, r4\n Assembly::ensureStandardDirectories(bool):\n ./src/mira/assembly.C:621\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr3, #0\n ./src/mira/assembly.C:621\n@@ -773272,43 +773272,43 @@\n \tnop\n \tsubs\tr3, #78\t@ 0x4e\n \tmovs\tr2, r6\n \tsubs\tr3, #64\t@ 0x40\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #960\t@ 0x3c0\n+\tadd\tr5, sp, #992\t@ 0x3e0\n \tmovs\tr6, r4\n-\tadd\tr5, sp, #760\t@ 0x2f8\n+\tadd\tr5, sp, #792\t@ 0x318\n \tmovs\tr6, r4\n-\tadd\tr5, sp, #840\t@ 0x348\n+\tadd\tr5, sp, #872\t@ 0x368\n \tmovs\tr6, r4\n-\tadd\tr4, sp, #792\t@ 0x318\n+\tadd\tr4, sp, #824\t@ 0x338\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #552\t@ 0x228\n+\tadd\tr4, sp, #584\t@ 0x248\n \tmovs\tr6, r4\n-\tadd\tr4, sp, #488\t@ 0x1e8\n+\tadd\tr4, sp, #520\t@ 0x208\n \tmovs\tr6, r4\n \tadds\tr6, #206\t@ 0xce\n \tmovs\tr2, r6\n-\tadd\tr2, sp, #584\t@ 0x248\n+\tadd\tr2, sp, #616\t@ 0x268\n \tmovs\tr6, r4\n-\tadd\tr1, sp, #512\t@ 0x200\n+\tadd\tr1, sp, #544\t@ 0x220\n \tmovs\tr6, r4\n-\tadd\tr1, sp, #744\t@ 0x2e8\n+\tadd\tr1, sp, #776\t@ 0x308\n \tmovs\tr6, r4\n-\tadd\tr1, sp, #728\t@ 0x2d8\n+\tadd\tr1, sp, #760\t@ 0x2f8\n \tmovs\tr6, r4\n-\tadd\tr1, sp, #336\t@ 0x150\n+\tadd\tr1, sp, #368\t@ 0x170\n \tmovs\tr6, r4\n std::__cxx11::list, std::allocator >, std::allocator, std::allocator > > >::operator=(std::__cxx11::list, std::allocator >, std::allocator, std::allocator > > > const&) [clone .part.0]:\n /usr/include/c++/10/bits/list.tcc:267\n \tldr\tr2, [pc, #396]\t@ (189c44 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe5aac>)\n \tldr\tr3, [pc, #400]\t@ (189c48 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe5ab0>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -774178,35 +774178,35 @@\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr1, #240\t@ 0xf0\n \tmovs\tr2, r6\n \tadds\tr1, #212\t@ 0xd4\n \tmovs\tr2, r6\n-\tands\tr2, r0\n+\tands\tr2, r1\n \tmovs\tr7, r4\n-\tsubs\tr7, #244\t@ 0xf4\n+\tsubs\tr7, #252\t@ 0xfc\n \tmovs\tr7, r4\n-\tsubs\tr7, #232\t@ 0xe8\n+\tsubs\tr7, #240\t@ 0xf0\n \tmovs\tr7, r4\n-\tadd\tr5, pc, #968\t@ (adr r5, 18a508 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6370>)\n+\tadd\tr5, pc, #1000\t@ (adr r5, 18a528 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6390>)\n \tmovs\tr6, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsubs\tr5, #220\t@ 0xdc\n+\tsubs\tr5, #228\t@ 0xe4\n \tmovs\tr7, r4\n-\tsubs\tr5, #208\t@ 0xd0\n+\tsubs\tr5, #216\t@ 0xd8\n \tmovs\tr7, r4\n-\tsubs\tr5, #196\t@ 0xc4\n+\tsubs\tr5, #204\t@ 0xcc\n \tmovs\tr7, r4\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n /usr/include/c++/10/fstream:732\n \tvmov\tr0, s16\n@@ -774722,25 +774722,25 @@\n \tb.n\t18a4ec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6354>\n \tb.n\t18a4c6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe632e>\n \tb.n\t18a4b6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe631e>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #936\t@ (adr r1, 18a8d8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6740>)\n+\tadd\tr1, pc, #968\t@ (adr r1, 18a8f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6760>)\n \tmovs\tr6, r4\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #800\t@ (adr r1, 18a858 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe66c0>)\n+\tadd\tr1, pc, #832\t@ (adr r1, 18a878 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe66e0>)\n \tmovs\tr6, r4\n-\tadd\tr1, pc, #920\t@ (adr r1, 18a8d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe673c>)\n+\tadd\tr1, pc, #952\t@ (adr r1, 18a8f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe675c>)\n \tmovs\tr6, r4\n-\tlsrs\tr0, r4, #25\n+\tlsrs\tr4, r5, #25\n \tmovs\tr6, r4\n-\tadd\tr1, pc, #200\t@ (adr r1, 18a60c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6474>)\n+\tadd\tr1, pc, #232\t@ (adr r1, 18a62c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6494>)\n \tmovs\tr6, r4\n Assembly::lsdPassInfo(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly.C:1925\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr\tr2, [pc, #744]\t@ (18a834 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe669c>)\n \tsub.w\tsp, sp, #556\t@ 0x22c\n@@ -775149,27 +775149,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tcmp\tr0, #214\t@ 0xd6\n \tmovs\tr2, r6\n-\tldr\tr6, [sp, #296]\t@ 0x128\n+\tldr\tr6, [sp, #328]\t@ 0x148\n \tmovs\tr6, r4\n-\tldr\tr6, [sp, #296]\t@ 0x128\n+\tldr\tr6, [sp, #328]\t@ 0x148\n \tmovs\tr6, r4\n-\tldr\tr5, [sp, #824]\t@ 0x338\n+\tldr\tr5, [sp, #856]\t@ 0x358\n \tmovs\tr6, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #520]\t@ 0x208\n+\tldr\tr5, [sp, #552]\t@ 0x228\n \tmovs\tr6, r4\n-\tldr\tr5, [sp, #360]\t@ 0x168\n+\tldr\tr5, [sp, #392]\t@ 0x188\n \tmovs\tr6, r4\n Assembly::ssdReadPool(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly.C:1862\n \tldr\tr2, [pc, #540]\t@ (18aa94 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe68fc>)\n \tldr\tr3, [pc, #544]\t@ (18aa98 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe6900>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -775452,17 +775452,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tmovs\tr5, #208\t@ 0xd0\n \tmovs\tr2, r6\n-\tldr\tr3, [sp, #368]\t@ 0x170\n+\tldr\tr3, [sp, #400]\t@ 0x190\n \tmovs\tr6, r4\n-\tldr\tr3, [sp, #336]\t@ 0x150\n+\tldr\tr3, [sp, #368]\t@ 0x170\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::ssdPassInfo(std::__cxx11::basic_string, std::allocator > const&, unsigned int):\n ./src/mira/assembly.C:1874\n@@ -775779,17 +775779,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tmovs\tr3, #92\t@ 0x5c\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #168]\t@ 0xa8\n+\tldr\tr1, [sp, #200]\t@ 0xc8\n \tmovs\tr6, r4\n-\tldr\tr1, [sp, #136]\t@ 0x88\n+\tldr\tr1, [sp, #168]\t@ 0xa8\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::ssdMaxCovReached(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly.C:1885\n@@ -776212,17 +776212,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tsubs\tr4, r4, #7\n \tmovs\tr2, r6\n-\tstr\tr6, [sp, #200]\t@ 0xc8\n+\tstr\tr6, [sp, #232]\t@ 0xe8\n \tmovs\tr6, r4\n-\tstr\tr6, [sp, #168]\t@ 0xa8\n+\tstr\tr6, [sp, #200]\t@ 0xc8\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::ssdBannedOverlaps(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly.C:1896\n@@ -776736,17 +776736,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tsubs\tr2, r5, r7\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #528]\t@ 0x210\n+\tstr\tr2, [sp, #560]\t@ 0x230\n \tmovs\tr6, r4\n-\tstr\tr2, [sp, #528]\t@ 0x210\n+\tstr\tr2, [sp, #560]\t@ 0x230\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::saveResumeDataMA(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly.C:2121\n@@ -778103,31 +778103,31 @@\n \tb.n\t18bcde , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe7b46>\n \tsubs\tr4, r4, r1\n \tmovs\tr2, r6\n \tsubs\tr4, r1, r1\n \tmovs\tr2, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #792]\t@ 0x318\n+\tldr\tr3, [sp, #824]\t@ 0x338\n \tmovs\tr6, r4\n-\tldr\tr2, [sp, #928]\t@ 0x3a0\n+\tldr\tr2, [sp, #960]\t@ 0x3c0\n \tmovs\tr6, r4\n-\tldr\tr1, [sp, #976]\t@ 0x3d0\n+\tldr\tr1, [sp, #1008]\t@ 0x3f0\n \tmovs\tr6, r4\n-\tldr\tr0, [sp, #744]\t@ 0x2e8\n+\tldr\tr0, [sp, #776]\t@ 0x308\n \tmovs\tr6, r4\n-\tstr\tr7, [sp, #520]\t@ 0x208\n+\tstr\tr7, [sp, #552]\t@ 0x228\n \tmovs\tr6, r4\n \tasrs\tr4, r0, #19\n \tmovs\tr2, r6\n-\tldrh\tr6, [r7, #26]\n+\tldrh\tr6, [r0, #28]\n \tmovs\tr6, r4\n-\tldrh\tr0, [r1, #28]\n+\tldrh\tr0, [r2, #28]\n \tmovs\tr6, r4\n-\tldrh\tr2, [r1, #28]\n+\tldrh\tr2, [r2, #28]\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::init():\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -779929,23 +779929,23 @@\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tb.n\t18c63c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe84a4>\n \tnop\n \tlsrs\tr4, r0, #24\n \tmovs\tr2, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr0, [r4, #46]\t@ 0x2e\n+\tstrh\tr0, [r5, #46]\t@ 0x2e\n \tmovs\tr6, r4\n \tlsls\tr0, r6, #23\n \tmovs\tr0, r0\n-\tstrh\tr4, [r4, #44]\t@ 0x2c\n+\tstrh\tr4, [r5, #44]\t@ 0x2c\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #2\n \tmovs\tr0, r0\n-\tstrh\tr4, [r5, #42]\t@ 0x2a\n+\tstrh\tr4, [r6, #42]\t@ 0x2a\n \tmovs\tr6, r4\n \tlsls\tr0, r2, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n@@ -780882,27 +780882,27 @@\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tvqadd.u8\td16, d8, d17\n-\tstrb\tr0, [r5, #29]\n+\tstrb\tr0, [r6, #29]\n \tmovs\tr6, r4\n-\tstrb\tr4, [r7, #18]\n+\tstrb\tr4, [r0, #19]\n \tmovs\tr6, r4\n-\tstrb\tr0, [r5, #27]\n+\tstrb\tr0, [r6, #27]\n \tmovs\tr6, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrb\tr4, [r7, #15]\n+\tstrb\tr4, [r0, #16]\n \tmovs\tr6, r4\n-\tstrb\tr4, [r7, #25]\n+\tstrb\tr4, [r0, #26]\n \tmovs\tr6, r4\n Assembly::fpo_main(int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly.C:2864\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1608]\t@ 18d8a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe9708>\n \tvpush\t{d8-d9}\n@@ -781734,33 +781734,33 @@\n \t...\n \tldc2l\t0, cr0, [r6], #196\t@ 0xc4\n \tstc2l\t0, cr0, [r8], #196\t@ 0xc4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr6, [r3, #20]\n+\tstrb\tr6, [r4, #20]\n \tmovs\tr6, r4\n-\tcpsie\tai\n+\t\t\t@ instruction: 0xb66e\n \tmovs\tr6, r4\n-\tstrb\tr4, [r5, #13]\n+\tstrb\tr4, [r6, #13]\n \tmovs\tr6, r4\n-\tstrb\tr6, [r5, #13]\n+\tstrb\tr6, [r6, #13]\n \tmovs\tr6, r4\n-\tlsrs\tr6, r3, #3\n+\tlsrs\tr6, r4, #3\n \tmovs\tr7, r4\n-\tstrb\tr6, [r6, #7]\n+\tstrb\tr6, [r7, #7]\n \tmovs\tr6, r4\n-\tlsls\tr0, r6, #21\n+\tlsls\tr0, r7, #21\n \tmovs\tr7, r4\n-\tlsls\tr6, r2, #21\n+\tlsls\tr6, r3, #21\n \tmovs\tr7, r4\n-\tldmia\tr1, {r1, r2, r5}\n+\tldmia\tr1, {r1, r2, r3, r5}\n \tmovs\tr0, r5\n-\tlsls\tr4, r7, #20\n+\tlsls\tr4, r0, #21\n \tmovs\tr7, r4\n \tstr\tr2, [sp, #16]\n \tbl\t1867c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe2628>\n ./src/mira/assembly.C:3149 (discriminator 6)\n \tmov\tr0, r8\n \tmov\tr1, fp\n \tbl\t183f04 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xdfd6c>\n@@ -782583,63 +782583,63 @@\n \tadd\tr1, pc\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n \tb.w\t18d55e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe93c6>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tstrb\tr2, [r7, #25]\n+\tstrb\tr2, [r0, #26]\n \tmovs\tr6, r4\n \t\t\t@ instruction: 0xf52a0031\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr0, [r7, #88]\t@ 0x58\n+\tldr\tr0, [r0, #92]\t@ 0x5c\n \tmovs\tr6, r4\n-\tldr\tr6, [r6, #88]\t@ 0x58\n+\tldr\tr6, [r7, #88]\t@ 0x58\n \tmovs\tr6, r4\n-\tlsls\tr6, r4, #12\n+\tlsls\tr6, r5, #12\n \tmovs\tr7, r4\n-\tldr\tr0, [r3, #76]\t@ 0x4c\n+\tldr\tr0, [r4, #76]\t@ 0x4c\n \tmovs\tr6, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tldr\tr4, [r1, #96]\t@ 0x60\n+\tldr\tr4, [r2, #96]\t@ 0x60\n \tmovs\tr6, r4\n-\tstrb\tr2, [r5, #8]\n+\tstrb\tr2, [r6, #8]\n \tmovs\tr6, r4\n-\tstrb\tr4, [r0, #8]\n+\tstrb\tr4, [r1, #8]\n \tmovs\tr6, r4\n-\tstrb\tr0, [r3, #8]\n+\tstrb\tr0, [r4, #8]\n \tmovs\tr6, r4\n-\tstrb\tr6, [r5, #8]\n+\tstrb\tr6, [r6, #8]\n \tmovs\tr6, r4\n-\tstrb\tr0, [r4, #10]\n+\tstrb\tr0, [r5, #10]\n \tmovs\tr6, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r3, #8]\n+\tstrb\tr0, [r4, #8]\n \tmovs\tr6, r4\n-\tstmia\tr3!, {r1, r3, r6, r7}\n+\tstmia\tr3!, {r1, r4, r6, r7}\n \tmovs\tr0, r5\n-\tvaddl.u16\tq8, d14, d22\n-\tldr\tr6, [r0, #20]\n+\tvaddl.u32\tq8, d6, d22\n+\tldr\tr6, [r1, #20]\n \tmovs\tr6, r4\n-\tldr\tr6, [r1, #24]\n+\tldr\tr6, [r2, #24]\n \tmovs\tr6, r4\n-\tldr\tr2, [r1, #24]\n+\tldr\tr2, [r2, #24]\n \tmovs\tr6, r4\n ./src/mira/assembly.C:3004\n \tldr\tr0, [sp, #80]\t@ 0x50\n \tbl\t13c764 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x985cc>\n ./src/mira/assembly.C:3005\n \tldr\tr0, [r4, #0]\n ./src/mira/assembly.C:3006\n@@ -783503,41 +783503,41 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t18e61c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xea484>\n \tb.n\t18e438 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xea2a0>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t18e594 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xea3fc>\n \tb.n\t18e44c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xea2b4>\n \tnop\n-\tldr\tr0, [r4, #116]\t@ 0x74\n+\tldr\tr0, [r5, #116]\t@ 0x74\n \tmovs\tr6, r4\n-\tstmia\tr1!, {r4}\n+\tstmia\tr1!, {r3, r4}\n \tmovs\tr0, r5\n-\tstc2\t0, cr0, [r4, #-152]!\t@ 0xffffff68\n-\tstr\tr0, [r3, #120]\t@ 0x78\n+\tstc2\t0, cr0, [ip, #-152]!\t@ 0xffffff68\n+\tstr\tr0, [r4, #120]\t@ 0x78\n \tmovs\tr6, r4\n-\tstr\tr4, [r3, #120]\t@ 0x78\n+\tstr\tr4, [r4, #120]\t@ 0x78\n \tmovs\tr6, r4\n-\tldr\tr0, [r4, #4]\n+\tldr\tr0, [r5, #4]\n \tmovs\tr6, r4\n-\tldr\tr6, [r3, #24]\n+\tldr\tr6, [r4, #24]\n \tmovs\tr6, r4\n-\tldr\tr2, [r3, #36]\t@ 0x24\n+\tldr\tr2, [r4, #36]\t@ 0x24\n \tmovs\tr6, r4\n-\tldr\tr4, [r4, #36]\t@ 0x24\n+\tldr\tr4, [r5, #36]\t@ 0x24\n \tmovs\tr6, r4\n-\tldr\tr2, [r0, #12]\n+\tldr\tr2, [r1, #12]\n \tmovs\tr6, r4\n-\tldrh\tr2, [r1, #6]\n+\tldrh\tr6, [r2, #6]\n \tmovs\tr5, r4\n-\tstr\tr2, [r1, #88]\t@ 0x58\n-\tmovs\tr6, r4\n-\tstr\tr0, [r7, #88]\t@ 0x58\n+\tstr\tr2, [r2, #88]\t@ 0x58\n \tmovs\tr6, r4\n \tstr\tr0, [r0, #92]\t@ 0x5c\n \tmovs\tr6, r4\n+\tstr\tr0, [r1, #92]\t@ 0x5c\n+\tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::loadResumeDataFPO(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly.C:2080\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -784464,25 +784464,25 @@\n \tadd\tr1, sp, #84\t@ 0x54\n \tstr\tr1, [sp, #44]\t@ 0x2c\n \tb.n\t18eb24 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xea98c>\n \tldmia.w\tr8!, {r0, r4, r5}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia.w\tr2!, {r0, r4, r5}\n-\tldr\tr4, [r6, #16]\n+\tldr\tr4, [r7, #16]\n \tmovs\tr6, r4\n-\tstr\tr2, [r3, #124]\t@ 0x7c\n+\tstr\tr2, [r4, #124]\t@ 0x7c\n \tmovs\tr6, r4\n \tb.n\t18e6b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xea51c>\n \tmovs\tr1, r6\n-\tstr\tr6, [r5, #80]\t@ 0x50\n+\tstr\tr6, [r6, #80]\t@ 0x50\n \tmovs\tr6, r4\n-\tstr\tr0, [r7, #80]\t@ 0x50\n+\tstr\tr0, [r0, #84]\t@ 0x54\n \tmovs\tr6, r4\n-\tstr\tr2, [r1, #84]\t@ 0x54\n+\tstr\tr2, [r2, #84]\t@ 0x54\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::findPossibleOverlaps(int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly.C:2739\n@@ -785567,27 +785567,27 @@\n \tnop\n \tnop.w\n \t...\n \tb.n\t18fa74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb8dc>\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr6, [r3, #60]\t@ 0x3c\n+\tstr\tr6, [r4, #60]\t@ 0x3c\n \tmovs\tr6, r4\n \tb.n\t18fa14 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb87c>\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr0, [r0, #52]\t@ 0x34\n+\tstr\tr0, [r1, #52]\t@ 0x34\n \tmovs\tr6, r4\n-\tstr\tr6, [r6, #52]\t@ 0x34\n+\tstr\tr6, [r7, #52]\t@ 0x34\n \tmovs\tr6, r4\n-\tstr\tr2, [r5, #52]\t@ 0x34\n+\tstr\tr2, [r6, #52]\t@ 0x34\n \tmovs\tr6, r4\n-\tmovs\tr5, #196\t@ 0xc4\n+\tmovs\tr5, #204\t@ 0xcc\n \tmovs\tr1, r5\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n@@ -785603,31 +785603,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #160\t@ (adr r2, 18f594 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb3fc>)\n+\tadd\tr2, pc, #208\t@ (adr r2, 18f5c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb42c>)\n \tmovs\tr5, r4\n-\tadd\tr2, pc, #144\t@ (adr r2, 18f588 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb3f0>)\n+\tadd\tr2, pc, #192\t@ (adr r2, 18f5b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb420>)\n \tmovs\tr5, r4\n-\t\t\t@ instruction: 0xb860\n+\t\t\t@ instruction: 0xb868\n \tmovs\tr7, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrb\tr4, [r3, r3]\n+\tldrb\tr4, [r4, r3]\n \tmovs\tr6, r4\n-\tldr\tr5, [pc, #152]\t@ (18f5a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb410>)\n+\tldr\tr5, [pc, #184]\t@ (18f5c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb430>)\n \tmovs\tr6, r4\n-\tldr\tr4, [pc, #1008]\t@ (18f904 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb76c>)\n+\tldr\tr5, [pc, #16]\t@ (18f524 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb38c>)\n \tmovs\tr6, r4\n ./src/mira/assembly.C:2768\n \tldr\tr1, [pc, #1000]\t@ (18f900 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb768>)\n \tadd\tr6, sp, #152\t@ 0x98\n \tmov\tr0, r6\n \tadd\tr1, pc\n \tbl\t183f74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xdfddc>\n@@ -786172,34 +786172,34 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t18f8c6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeb72e>\n \tnop.w\n \t...\n-\tldmia.w\tsl, {r1, r2, r5}\n-\tstmia.w\tlr, {r1, r2, r5}\n-\tldrh\tr2, [r5, r6]\n+\tstmia.w\tr2!, {r1, r2, r5}\n+\tldmia.w\tr6, {r1, r2, r5}\n+\tldrh\tr2, [r6, r6]\n \tmovs\tr6, r4\n-\tstrh\tr4, [r7, r3]\n+\tstrh\tr4, [r0, r4]\n \tmovs\tr6, r4\n-\tstrd\tr0, r0, [lr], #-152\t@ 0x98\n+\tldrd\tr0, r0, [r6], #-152\t@ 0x98\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #584]\t@ 0x248\n+\tldr\tr6, [sp, #632]\t@ 0x278\n \tmovs\tr5, r4\n-\tldr\tr6, [sp, #536]\t@ 0x218\n+\tldr\tr6, [sp, #584]\t@ 0x248\n \tmovs\tr5, r4\n-\tstmia\tr6!, {r2, r4, r6}\n+\tstmia\tr6!, {r2, r3, r4, r6}\n \tmovs\tr7, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -787392,71 +787392,71 @@\n \tnop\n \tbpl.n\t19006c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xebed4>\n \tmovs\tr1, r6\n \tbpl.n\t190038 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xebea0>\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrsb\tr0, [r2, r0]\n+\tldrsb\tr0, [r3, r0]\n \tmovs\tr6, r4\n-\tstrb\tr6, [r3, r7]\n+\tstrb\tr6, [r4, r7]\n \tmovs\tr6, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr6, [r2, r7]\n+\tstrb\tr6, [r3, r7]\n \tmovs\tr6, r4\n-\tb.n\t190558 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec3c0>\n+\tb.n\t190568 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec3d0>\n \tmovs\tr6, r4\n-\tldrsb\tr0, [r1, r0]\n+\tldrsb\tr0, [r2, r0]\n \tmovs\tr6, r4\n-\tb.n\t190530 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec398>\n+\tb.n\t190540 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec3a8>\n \tmovs\tr6, r4\n-\tb.n\t1904a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec310>\n+\tb.n\t1904b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec320>\n \tmovs\tr6, r4\n-\tstrb\tr2, [r7, r6]\n+\tstrb\tr2, [r0, r7]\n \tmovs\tr6, r4\n-\tb.n\t190480 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec2e8>\n+\tb.n\t190490 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec2f8>\n \tmovs\tr6, r4\n \tlsls\tr0, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t1903e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec248>\n+\tb.n\t1903f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec258>\n \tmovs\tr6, r4\n-\tstrb\tr6, [r1, r5]\n+\tstrb\tr6, [r2, r5]\n \tmovs\tr6, r4\n-\tb.n\t1903b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec220>\n+\tb.n\t1903c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec230>\n \tmovs\tr6, r4\n-\tb.n\t1901f8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec060>\n+\tb.n\t190208 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec070>\n \tmovs\tr6, r4\n-\tstrb\tr4, [r3, r2]\n+\tstrb\tr4, [r4, r2]\n \tmovs\tr6, r4\n-\tb.n\t1901c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec02c>\n+\tb.n\t1901d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec03c>\n \tmovs\tr6, r4\n-\tsvc\t216\t@ 0xd8\n+\tsvc\t224\t@ 0xe0\n \tmovs\tr6, r4\n-\tsvc\t198\t@ 0xc6\n+\tsvc\t206\t@ 0xce\n \tmovs\tr6, r4\n-\tadd\tr3, pc, #616\t@ (adr r3, 1903c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec22c>)\n+\tadd\tr3, pc, #648\t@ (adr r3, 1903e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec24c>)\n \tmovs\tr0, r5\n-\tsvc\t176\t@ 0xb0\n+\tsvc\t184\t@ 0xb8\n \tmovs\tr6, r4\n-\tstrh\tr6, [r3, r6]\n+\tstrh\tr6, [r4, r6]\n \tmovs\tr6, r4\n \tbeq.n\t19007c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xebee4>\n \tmovs\tr1, r6\n-\tstrh\tr6, [r1, r0]\n+\tstrh\tr6, [r2, r0]\n \tmovs\tr6, r4\n-\tstrh\tr0, [r7, r1]\n+\tstrh\tr0, [r0, r2]\n \tmovs\tr6, r4\n-\tstrh\tr4, [r0, r1]\n+\tstrh\tr4, [r1, r1]\n \tmovs\tr6, r4\n-\tudf\t#34\t@ 0x22\n+\tudf\t#42\t@ 0x2a\n \tmovs\tr6, r4\n-\tstrh\tr0, [r4, r0]\n+\tstrh\tr0, [r5, r0]\n \tmovs\tr6, r4\n-\tudf\t#14\n+\tudf\t#22\n \tmovs\tr6, r4\n std::vector >::operator=(std::vector > const&) [clone .isra.0]:\n /usr/include/c++/10/bits/vector.tcc:198\n \tmov\tr3, r1\n \tldr.w\tr1, [pc, #1556]\t@ 190798 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec600>\n \tldr.w\tr2, [pc, #1556]\t@ 19079c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xec604>\n /usr/include/c++/10/bits/vector.tcc:201\n@@ -789058,70 +789058,70 @@\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr7!, {r2, r3, r7}\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #352]\t@ (1910c0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xecf28>)\n+\tldr\tr2, [pc, #384]\t@ (1910e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xecf48>)\n \tmovs\tr6, r4\n-\tldr\tr2, [pc, #656]\t@ (1911f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed05c>)\n+\tldr\tr2, [pc, #688]\t@ (191214 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed07c>)\n \tmovs\tr6, r4\n-\tldr\tr2, [pc, #688]\t@ (191218 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed080>)\n+\tldr\tr2, [pc, #720]\t@ (191238 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed0a0>)\n \tmovs\tr6, r4\n-\tldr\tr2, [pc, #608]\t@ (1911cc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed034>)\n+\tldr\tr2, [pc, #640]\t@ (1911ec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed054>)\n \tmovs\tr6, r4\n \tstmia\tr6!, {r1, r2, r5, r6}\n \tmovs\tr1, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr0, [pc, #600]\t@ (1911d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed038>)\n+\tldr\tr0, [pc, #632]\t@ (1911f0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed058>)\n \tmovs\tr6, r4\n-\tldrb\tr0, [r0, r5]\n+\tldrb\tr0, [r1, r5]\n \tmovs\tr6, r4\n-\t\t\t@ instruction: 0x47b2\n+\t\t\t@ instruction: 0x47ba\n \tmovs\tr6, r4\n-\tbx\tr1\n+\tbx\tr2\n \tmovs\tr6, r4\n \tstmia\tr3!, {r3, r4, r5, r6}\n \tmovs\tr1, r6\n-\tldrh\tr6, [r5, #6]\n+\tldrh\tr2, [r7, #6]\n \tmovs\tr5, r4\n-\tldrh\tr2, [r4, #6]\n+\tldrh\tr6, [r5, #6]\n \tmovs\tr5, r4\n-\tsub\tsp, #200\t@ 0xc8\n+\tsub\tsp, #232\t@ 0xe8\n \tmovs\tr7, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr6, r0\n+\tcmp\tr6, r1\n \tmovs\tr6, r4\n-\tldr\tr6, [r3, r6]\n+\tldr\tr6, [r4, r6]\n \tmovs\tr6, r4\n-\tldr\tr2, [r3, r5]\n+\tldr\tr2, [r4, r5]\n \tmovs\tr6, r4\n-\tldr\tr0, [r1, r4]\n+\tldr\tr0, [r2, r4]\n \tmovs\tr6, r4\n-\tldr\tr4, [r6, r2]\n+\tldr\tr4, [r7, r2]\n+\tmovs\tr6, r4\n+\tldr\tr6, [r6, r2]\n \tmovs\tr6, r4\n \tldr\tr6, [r5, r2]\n \tmovs\tr6, r4\n \tldr\tr6, [r4, r2]\n \tmovs\tr6, r4\n-\tldr\tr6, [r3, r2]\n+\tldr\tr2, [r6, r1]\n \tmovs\tr6, r4\n \tldr\tr2, [r5, r1]\n \tmovs\tr6, r4\n \tldr\tr2, [r4, r1]\n \tmovs\tr6, r4\n-\tldr\tr2, [r3, r1]\n-\tmovs\tr6, r4\n std::vector, std::allocator >, std::allocator, std::allocator > > >& boost::algorithm::iter_split, std::allocator >, std::allocator, std::allocator > > >, std::__cxx11::basic_string, std::allocator >&, boost::algorithm::detail::token_finderF > >(std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::__cxx11::basic_string, std::allocator >&, boost::algorithm::detail::token_finderF >) [clone .isra.0]:\n /usr/include/boost/algorithm/string/iter_find.hpp:147\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n \tldr.w\tr4, [pc, #1524]\t@ 1915c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xed430>\n \tsub\tsp, #284\t@ 0x11c\n \tmov\tr6, r1\n@@ -792907,86 +792907,86 @@\n \tb.n\t192a46 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xee8ae>\n \tb.n\t192a3e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xee8a6>\n \tnop\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr2, #64\t@ 0x40\n+\tadds\tr2, #72\t@ 0x48\n \tmovs\tr6, r4\n-\tmovs\tr2, #72\t@ 0x48\n+\tmovs\tr2, #80\t@ 0x50\n \tmovs\tr6, r4\n-\tmovs\tr2, #68\t@ 0x44\n+\tmovs\tr2, #76\t@ 0x4c\n \tmovs\tr6, r4\n-\tcmp\tr7, #254\t@ 0xfe\n+\tadds\tr0, #6\n \tmovs\tr6, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tadds\tr0, #14\n+\tadds\tr0, #22\n \tmovs\tr6, r4\n-\tadds\tr0, #8\n+\tadds\tr0, #16\n \tmovs\tr6, r4\n-\tcmp\tr7, #114\t@ 0x72\n+\tcmp\tr7, #122\t@ 0x7a\n \tmovs\tr6, r4\n-\tcmp\tr7, #116\t@ 0x74\n+\tcmp\tr7, #124\t@ 0x7c\n \tmovs\tr6, r4\n-\tsubs\tr6, r2, #7\n+\tsubs\tr6, r3, #7\n \tmovs\tr1, r5\n-\tcmp\tr6, #240\t@ 0xf0\n+\tcmp\tr6, #248\t@ 0xf8\n \tmovs\tr6, r4\n-\tmovs\tr0, #110\t@ 0x6e\n+\tmovs\tr0, #118\t@ 0x76\n \tmovs\tr6, r4\n-\tcmp\tr6, #124\t@ 0x7c\n+\tcmp\tr6, #132\t@ 0x84\n \tmovs\tr6, r4\n-\tcmp\tr6, #244\t@ 0xf4\n+\tcmp\tr6, #252\t@ 0xfc\n \tmovs\tr6, r4\n-\tcmp\tr6, #6\n+\tcmp\tr6, #14\n \tmovs\tr6, r4\n-\tcmp\tr7, #74\t@ 0x4a\n+\tcmp\tr7, #82\t@ 0x52\n \tmovs\tr6, r4\n-\tcmp\tr7, #72\t@ 0x48\n+\tcmp\tr7, #80\t@ 0x50\n \tmovs\tr6, r4\n-\tcmp\tr5, #104\t@ 0x68\n+\tcmp\tr5, #112\t@ 0x70\n \tmovs\tr6, r4\n-\tcmp\tr6, #128\t@ 0x80\n+\tcmp\tr6, #136\t@ 0x88\n \tmovs\tr6, r4\n-\tmovs\tr1, #172\t@ 0xac\n+\tmovs\tr1, #180\t@ 0xb4\n \tmovs\tr6, r4\n-\tsubs\tr6, r7, #3\n+\tsubs\tr6, r0, #4\n \tmovs\tr6, r4\n-\tcmp\tr4, #184\t@ 0xb8\n+\tcmp\tr4, #192\t@ 0xc0\n \tmovs\tr6, r4\n-\tmovs\tr1, #40\t@ 0x28\n+\tmovs\tr1, #48\t@ 0x30\n \tmovs\tr6, r4\n-\tsubs\tr2, r7, #1\n+\tsubs\tr2, r0, #2\n \tmovs\tr6, r4\n-\tcmp\tr4, #52\t@ 0x34\n+\tcmp\tr4, #60\t@ 0x3c\n \tmovs\tr6, r4\n-\tcmp\tr4, #248\t@ 0xf8\n+\tcmp\tr5, #0\n \tmovs\tr6, r4\n-\tcmp\tr4, #22\n+\tcmp\tr4, #30\n \tmovs\tr0, r5\n-\tcmp\tr4, #236\t@ 0xec\n+\tcmp\tr4, #244\t@ 0xf4\n \tmovs\tr6, r4\n-\tstmdb\tr6, {r3, r5}\n-\tcmp\tr3, #116\t@ 0x74\n+\tstmdb\tlr, {r3, r5}\n+\tcmp\tr3, #124\t@ 0x7c\n \tmovs\tr6, r4\n-\tcmp\tr4, #12\n+\tcmp\tr4, #20\n \tmovs\tr6, r4\n-\tcmp\tr3, #0\n+\tcmp\tr3, #8\n \tmovs\tr6, r4\n-\tcmp\tr3, #86\t@ 0x56\n+\tcmp\tr3, #94\t@ 0x5e\n \tmovs\tr6, r4\n-\tadds\tr2, r5, #2\n+\tadds\tr2, r6, #2\n \tmovs\tr6, r4\n-\tadds\tr2, r5, #2\n+\tadds\tr2, r6, #2\n \tmovs\tr6, r4\n-\tcmp\tr2, #102\t@ 0x66\n+\tcmp\tr2, #110\t@ 0x6e\n \tmovs\tr6, r4\n Assembly::loadSnapshotData(unsigned int&):\n ./src/mira/assembly.C:1840\n \tldr\tr2, [pc, #188]\t@ (192c88 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeeaf0>)\n \tldr\tr3, [pc, #192]\t@ (192c8c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xeeaf4>)\n \tpush\t{r4, r5, r6, r7, lr}\n \tadd\tr2, pc\n@@ -794485,33 +794485,33 @@\n \tnop\n \tadd\tr2, pc, #736\t@ (adr r2, 193810 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xef678>)\n \tmovs\tr1, r6\n \tadd\tr2, pc, #640\t@ (adr r2, 1937b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xef61c>)\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr4, #26\n+\tmovs\tr4, #34\t@ 0x22\n \tmovs\tr6, r4\n-\tmovs\tr3, #64\t@ 0x40\n+\tmovs\tr3, #72\t@ 0x48\n \tmovs\tr6, r4\n-\tmovs\tr1, #238\t@ 0xee\n+\tmovs\tr1, #246\t@ 0xf6\n \tmovs\tr6, r4\n-\tmovs\tr0, #182\t@ 0xb6\n+\tmovs\tr0, #190\t@ 0xbe\n \tmovs\tr6, r4\n-\tadd\tr4, sp, #360\t@ 0x168\n+\tadd\tr4, sp, #392\t@ 0x188\n \tmovs\tr6, r4\n-\tsubs\tr4, r6, #5\n+\tsubs\tr4, r7, #5\n \tmovs\tr6, r4\n \tldr\tr4, [sp, #896]\t@ 0x380\n \tmovs\tr1, r6\n-\tadds\tr6, r4, #2\n+\tadds\tr6, r5, #2\n \tmovs\tr6, r4\n-\tadds\tr0, r6, #2\n+\tadds\tr0, r7, #2\n \tmovs\tr6, r4\n-\tmovs\tr1, #134\t@ 0x86\n+\tmovs\tr1, #142\t@ 0x8e\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n void std::__cxx11::list >::_M_assign_dispatch >(std::_List_const_iterator, std::_List_const_iterator, std::__false_type) [clone .isra.0]:\n /usr/include/c++/10/bits/list.tcc:308\n@@ -796140,31 +796140,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #568\t@ (adr r3, 1945bc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf0424>)\n+\tadd\tr3, pc, #600\t@ (adr r3, 1945dc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf0444>)\n \tmovs\tr6, r4\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n-\tldr\tr4, [r5, #16]\n+\tldr\tr0, [r7, #16]\n \tmovs\tr5, r4\n \tlsrs\tr0, r7, #32\n \tmovs\tr0, r0\n \tldrh\tr6, [r6, #36]\t@ 0x24\n \tmovs\tr1, r6\n-\tasrs\tr2, r5, #12\n+\tasrs\tr2, r6, #12\n \tmovs\tr6, r4\n-\tasrs\tr4, r1, #10\n+\tasrs\tr4, r2, #10\n \tmovs\tr6, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_vector.h:346\n \tcmp\tr2, #0\n@@ -798194,15 +798194,15 @@\n \tldr\tr0, [pc, #56]\t@ (195350 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf11b8>)\n \tadd\tr0, pc\n \tblx\tb068 \n \tldr\tr0, [pc, #52]\t@ (195354 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf11bc>)\n \tadd\tr0, pc\n \tblx\tb068 \n \tnop\n-\tstr\tr6, [sp, #976]\t@ 0x3d0\n+\tstr\tr6, [sp, #1008]\t@ 0x3f0\n \tmovs\tr6, r4\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #12\n \tmovs\tr5, r4\n \tlsrs\tr0, r4, #12\n \tmovs\tr5, r4\n@@ -799235,29 +799235,29 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tmov\tr2, r6\n \tb.n\t195478 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf12e0>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t1954f4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf135c>\n \tb.n\t1954fe , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf1366>\n \tnop\n-\tlsls\tr6, r7, #6\n+\tlsls\tr6, r0, #7\n \tmovs\tr6, r4\n-\tlsls\tr0, r5, #9\n+\tlsls\tr0, r6, #9\n \tmovs\tr6, r4\n-\tlsls\tr0, r2, #8\n+\tlsls\tr0, r3, #8\n \tmovs\tr6, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr4, r5, #4\n+\tlsls\tr4, r6, #4\n \tmovs\tr6, r4\n-\tlsls\tr6, r5, #4\n+\tlsls\tr6, r6, #4\n \tmovs\tr6, r4\n-\tlsls\tr6, r7, #5\n+\tlsls\tr6, r0, #6\n \tmovs\tr6, r4\n Assembly::transferContigReadTagsToReadpool(Contig const&, std::_List_const_iterator):\n ./src/mira/assembly.C:2439\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr1, [pc, #2756]\t@ 1965b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2418>\n \tldr.w\tr3, [pc, #2756]\t@ 1965b4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf241c>\n@@ -800627,28 +800627,28 @@\n \tmovs\tr0, r0\n \tstrb\tr2, [r3, #17]\n \tmovs\tr1, r6\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tstrh\tr0, [r6, #18]\n+\tstrh\tr0, [r7, #18]\n \tmovs\tr6, r4\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tstrh\tr4, [r7, #16]\n+\tstrh\tr4, [r0, #18]\n \tmovs\tr6, r4\n-\tstrh\tr6, [r1, #16]\n+\tstrh\tr6, [r2, #16]\n \tmovs\tr6, r4\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfb9a0025\n-\t\t\t@ instruction: 0xfb880025\n-\t\t\t@ instruction: 0xfb3e0025\n-\t\t\t@ instruction: 0xfac20025\n+\t\t\t@ instruction: 0xfba20025\n+\t\t\t@ instruction: 0xfb900025\n+\t\t\t@ instruction: 0xfb460025\n+\t\t\t@ instruction: 0xfaca0025\n \tstrb\tr0, [r1, #12]\n \tmovs\tr1, r6\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #4\n@@ -800665,47 +800665,47 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr4, r5, #17\n+\tlsls\tr4, r6, #17\n \tmovs\tr6, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr2, [r7, #21]\n+\tldrb\tr2, [r0, #22]\n \tmovs\tr6, r4\n-\tlsls\tr2, r7, #12\n+\tlsls\tr2, r0, #13\n \tmovs\tr6, r4\n \tlsrs\tr0, r6, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r6, #22\n \tmovs\tr0, r0\n \tasrs\tr0, r1, #2\n \tmovs\tr0, r0\n-\tlsls\tr6, r3, #5\n+\tlsls\tr6, r4, #5\n \tmovs\tr6, r4\n-\tadds\tr1, #24\n+\tadds\tr1, #36\t@ 0x24\n \tmovs\tr5, r4\n-\tadds\tr1, #18\n+\tadds\tr1, #30\n \tmovs\tr5, r4\n-\tbx\tsl\n+\tbx\tfp\n \tmovs\tr7, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr7, #226\t@ 0xe2\n+\tcmp\tr7, #238\t@ 0xee\n \tmovs\tr5, r4\n-\tcmp\tr7, #220\t@ 0xdc\n+\tcmp\tr7, #232\t@ 0xe8\n \tmovs\tr5, r4\n-\tmov\tr4, r3\n+\tmov\tr4, r4\n \tmovs\tr7, r4\n ./src/mira/../../src/mira/pcrcontainer.H:298\n \tcmp\tr5, #0\n \tbne.w\t19616c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf1fd4>\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr9, sp, #168\t@ 0xa8\n \tmov.w\tsl, #0\n@@ -801271,35 +801271,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstc2\t0, cr0, [lr, #-148]!\t@ 0xffffff6c\n+\tldc2\t0, cr0, [r6, #-148]!\t@ 0xffffff6c\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstc2\t0, cr0, [r8], #-148\t@ 0xffffff6c\n-\tcmp\tr3, #226\t@ 0xe2\n+\tldc2\t0, cr0, [r0], #-148\t@ 0xffffff6c\n+\tcmp\tr3, #238\t@ 0xee\n \tmovs\tr5, r4\n-\tcmp\tr3, #220\t@ 0xdc\n+\tcmp\tr3, #232\t@ 0xe8\n \tmovs\tr5, r4\n-\ttst\tr4, r3\n+\ttst\tr4, r4\n \tmovs\tr7, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr2, #172\t@ 0xac\n+\tcmp\tr2, #184\t@ 0xb8\n \tmovs\tr5, r4\n-\tcmp\tr2, #166\t@ 0xa6\n+\tcmp\tr2, #178\t@ 0xb2\n \tmovs\tr5, r4\n-\tlsrs\tr6, r4\n+\tlsrs\tr6, r5\n \tmovs\tr7, r4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #168\t@ 0xa8\n /usr/include/c++/10/ostream:391\n \tldr.w\tr9, [pc, #836]\t@ 196e78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2ce0>\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, sl\n@@ -801711,37 +801711,37 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr1, #34\t@ 0x22\n+\tcmp\tr1, #46\t@ 0x2e\n \tmovs\tr5, r4\n-\tcmp\tr1, #28\n+\tcmp\tr1, #40\t@ 0x28\n \tmovs\tr5, r4\n-\tsubs\tr7, #92\t@ 0x5c\n+\tsubs\tr7, #100\t@ 0x64\n \tmovs\tr7, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf7c00025\n+\t\t\t@ instruction: 0xf7c80025\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf7520025\n-\tmovs\tr7, #132\t@ 0x84\n+\t\t\t@ instruction: 0xf75a0025\n+\tmovs\tr7, #144\t@ 0x90\n \tmovs\tr5, r4\n-\tmovs\tr7, #126\t@ 0x7e\n+\tmovs\tr7, #138\t@ 0x8a\n \tmovs\tr5, r4\n-\tsubs\tr5, #184\t@ 0xb8\n+\tsubs\tr5, #192\t@ 0xc0\n \tmovs\tr7, r4\n-\t\t\t@ instruction: 0xf6280025\n+\t\t\t@ instruction: 0xf6300025\n ./src/mira/../../src/mira/readpool.H:123\n \tvmov\tr0, s16\n \tbl\t185010 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xe0e78>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #1400]\t@ 197444 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf32ac>\n \tvmov\tr0, s16\n \tmovs\tr2, #14\n@@ -802413,55 +802413,55 @@\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t19717e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2fe6>\n \tmov\tr5, r0\n \tmov\tr7, r1\n \tstr\tr0, [sp, #4]\n \tstr\tr1, [sp, #12]\n \tb.n\t197432 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf329a>\n-\tmovs\tr6, #42\t@ 0x2a\n+\tmovs\tr6, #54\t@ 0x36\n \tmovs\tr5, r4\n-\tmovs\tr6, #34\t@ 0x22\n+\tmovs\tr6, #46\t@ 0x2e\n \tmovs\tr5, r4\n-\tsubs\tr4, #96\t@ 0x60\n+\tsubs\tr4, #104\t@ 0x68\n \tmovs\tr7, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr5, #136\t@ 0x88\n+\tmovs\tr5, #148\t@ 0x94\n \tmovs\tr5, r4\n-\tmovs\tr5, #128\t@ 0x80\n+\tmovs\tr5, #140\t@ 0x8c\n \tmovs\tr5, r4\n-\tsubs\tr3, #190\t@ 0xbe\n+\tsubs\tr3, #198\t@ 0xc6\n \tmovs\tr7, r4\n-\tmovs\tr4, #230\t@ 0xe6\n+\tmovs\tr4, #242\t@ 0xf2\n \tmovs\tr5, r4\n-\tmovs\tr4, #222\t@ 0xde\n+\tmovs\tr4, #234\t@ 0xea\n \tmovs\tr5, r4\n-\tsubs\tr3, #28\n+\tsubs\tr3, #36\t@ 0x24\n \tmovs\tr7, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t197174 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2fdc>\n+\tb.n\t197184 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2fec>\n \tmovs\tr5, r4\n-\tb.n\t1971a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3008>\n+\tb.n\t1971b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3018>\n \tmovs\tr5, r4\n-\tb.n\t196f5c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2dc4>\n+\tb.n\t196f6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2dd4>\n \tmovs\tr5, r4\n-\tb.n\t196f60 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2dc8>\n+\tb.n\t196f70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf2dd8>\n \tmovs\tr5, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tb.n\t197c2c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3a94>\n+\tb.n\t197c3c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3aa4>\n \tmovs\tr5, r4\n-\tb.n\t197c60 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3ac8>\n+\tb.n\t197c70 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3ad8>\n \tmovs\tr5, r4\n-\tb.n\t197c64 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3acc>\n+\tb.n\t197c74 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3adc>\n \tmovs\tr5, r4\n Assembly::performSnapshot(unsigned int):\n ./src/mira/assembly.C:1738\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr2, [pc, #3204]\t@ 198124 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f8c>\n \tvpush\t{d8}\n@@ -804240,71 +804240,71 @@\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr0, [r4, r2]\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t19873c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf45a4>\n+\tb.n\t19874c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf45b4>\n \tmovs\tr5, r4\n-\tadds\tr4, #122\t@ 0x7a\n+\tadds\tr4, #134\t@ 0x86\n \tmovs\tr5, r4\n-\tadds\tr3, #176\t@ 0xb0\n+\tadds\tr3, #188\t@ 0xbc\n \tmovs\tr5, r4\n \tldrsb\tr4, [r7, r1]\n \tmovs\tr1, r6\n-\tsvc\t76\t@ 0x4c\n+\tsvc\t84\t@ 0x54\n \tmovs\tr5, r4\n-\tsvc\t170\t@ 0xaa\n+\tsvc\t178\t@ 0xb2\n \tmovs\tr5, r4\n-\tsvc\t212\t@ 0xd4\n+\tsvc\t220\t@ 0xdc\n \tmovs\tr5, r4\n-\tasrs\tr0, r5, #5\n+\tasrs\tr4, r6, #5\n \tmovs\tr5, r4\n-\tudf\t#2\n+\tudf\t#10\n \tmovs\tr5, r4\n-\tudf\t#34\t@ 0x22\n+\tudf\t#42\t@ 0x2a\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr2, r5, #2\n+\tasrs\tr6, r6, #2\n \tmovs\tr5, r4\n-\tudf\t#248\t@ 0xf8\n+\tsvc\t0\n \tmovs\tr5, r4\n-\tbgt.n\t19815c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3fc4>\n+\tbgt.n\t19816c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3fd4>\n \tmovs\tr5, r4\n-\tudf\t#142\t@ 0x8e\n+\tudf\t#150\t@ 0x96\n \tmovs\tr5, r4\n-\tbgt.n\t1981a0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4008>\n+\tbgt.n\t1981b0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4018>\n \tmovs\tr5, r4\n-\tbgt.n\t1980ac , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f14>\n+\tbgt.n\t1980bc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f24>\n \tmovs\tr5, r4\n-\tblt.n\t198248 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40b0>\n+\tblt.n\t198258 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40c0>\n \tmovs\tr5, r4\n-\tbgt.n\t198270 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40d8>\n+\tbgt.n\t198280 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40e8>\n \tmovs\tr5, r4\n-\tbge.n\t198168 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3fd0>\n+\tbge.n\t198178 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3fe0>\n \tmovs\tr5, r4\n-\tblt.n\t198168 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3fd0>\n+\tblt.n\t198178 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3fe0>\n \tmovs\tr5, r4\n-\tbls.n\t198114 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f7c>\n+\tbls.n\t198124 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f8c>\n \tmovs\tr5, r4\n-\tbgt.n\t198244 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40ac>\n+\tbgt.n\t198254 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40bc>\n \tmovs\tr5, r4\n-\tbhi.n\t1980d0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f38>\n+\tbhi.n\t1980e0 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f48>\n \tmovs\tr5, r4\n-\tbge.n\t1980c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f2c>\n+\tbge.n\t1980d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f3c>\n \tmovs\tr5, r4\n-\tbvc.n\t198118 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f80>\n+\tbvc.n\t198128 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf3f90>\n \tmovs\tr5, r4\n-\tblt.n\t198280 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40e8>\n+\tblt.n\t198290 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40f8>\n \tmovs\tr5, r4\n-\tbvc.n\t198264 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40cc>\n+\tbvc.n\t198274 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40dc>\n \tmovs\tr5, r4\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #76]\t@ 0x4c\n /usr/include/c++/10/bits/basic_string.h:231\n \tldr\tr3, [sp, #4]\n \tcmp\tr0, r3\n \tbne.n\t1981c4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf402c>\n@@ -804441,17 +804441,17 @@\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t198288 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40f0>\n \tb.n\t19828e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40f6>\n \tb.n\t198294 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf40fc>\n \tnop\n-\tbls.n\t198338 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf41a0>\n+\tbls.n\t198348 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf41b0>\n \tmovs\tr5, r4\n-\tbvs.n\t1982d4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf413c>\n+\tbvs.n\t1982e4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf414c>\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::assemble():\n ./src/mira/assembly.C:1059\n@@ -804640,15 +804640,15 @@\n /usr/include/c++/10/bits/stl_bvector.h:96\n \tb.n\t19837e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf41e6>\n \tnop\n \tldr\tr4, [pc, #584]\t@ (198658 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf44c0>)\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr0, r2, #6\n+\tlsrs\tr4, r3, #6\n \tmovs\tr5, r4\n \tldr\tr4, [pc, #344]\t@ (198574 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf43dc>)\n \tmovs\tr1, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n ./src/mira/assembly.C:1102\n \tldr\tr7, [sp, #44]\t@ 0x2c\n@@ -806441,79 +806441,79 @@\n \teors\tr4, r0\n \tstrb\tr5, [r2, r5]\n \tstrb\tr5, [r2, r5]\n \tstrb\tr5, [r2, r5]\n \tsubs\tr7, #213\t@ 0xd5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbls.n\t19917c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4fe4>\n+\tbls.n\t19918c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ff4>\n \tmovs\tr5, r4\n-\tldr\tr2, [r2, r4]\n+\tldr\tr2, [r3, r4]\n \tmovs\tr6, r4\n-\tbls.n\t19907c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ee4>\n+\tbls.n\t19908c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ef4>\n \tmovs\tr5, r4\n-\tbls.n\t199010 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e78>\n+\tbls.n\t199020 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e88>\n \tmovs\tr5, r4\n-\tbvc.n\t199048 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4eb0>\n+\tbvc.n\t199058 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ec0>\n \tmovs\tr5, r4\n-\tbvc.n\t1991a8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5010>\n+\tbvc.n\t198fb8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e20>\n \tmovs\tr5, r4\n-\tbvc.n\t198fbc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e24>\n+\tbvc.n\t198fcc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e34>\n \tmovs\tr5, r4\n-\tbvc.n\t199114 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4f7c>\n+\tbvc.n\t199124 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4f8c>\n \tmovs\tr5, r4\n-\tbvc.n\t199128 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4f90>\n+\tbvc.n\t199138 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4fa0>\n \tmovs\tr5, r4\n-\tbvs.n\t199080 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ee8>\n+\tbvs.n\t199090 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ef8>\n \tmovs\tr5, r4\n-\tbvs.n\t199094 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4efc>\n+\tbvs.n\t1990a4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4f0c>\n \tmovs\tr5, r4\n-\tbvs.n\t198fec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e54>\n+\tbvs.n\t198ffc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e64>\n \tmovs\tr5, r4\n-\tbvs.n\t19918c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ff4>\n+\tbvs.n\t19919c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5004>\n \tmovs\tr5, r4\n-\tbvs.n\t19912c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4f94>\n+\tbvs.n\t19913c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4fa4>\n \tmovs\tr5, r4\n-\tsub\tsp, #352\t@ 0x160\n+\tsub\tsp, #384\t@ 0x180\n \tmovs\tr5, r4\n-\tbvs.n\t198fdc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e44>\n+\tbvs.n\t198fec , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e54>\n \tmovs\tr5, r4\n-\tbvs.n\t1991c8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5030>\n+\tbvs.n\t198fd8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4e40>\n \tmovs\tr5, r4\n-\tbvs.n\t199070 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ed8>\n+\tbvs.n\t199080 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4ee8>\n \tmovs\tr5, r4\n-\tstmia\tr6!, {r1, r2, r3, r4, r6}\n+\tstmia\tr6!, {r1, r2, r5, r6}\n \tmovs\tr5, r4\n-\tstmia\tr5!, {r3, r5, r7}\n+\tstmia\tr5!, {r4, r5, r7}\n \tmovs\tr5, r4\n-\tstmia\tr4!, {r2, r4, r5, r7}\n+\tstmia\tr4!, {r2, r3, r4, r5, r7}\n \tmovs\tr5, r4\n-\tstmia\tr5!, {r1, r3, r5}\n+\tstmia\tr5!, {r1, r4, r5}\n \tmovs\tr5, r4\n-\tstmia\tr4!, {r2, r4, r5, r6}\n+\tstmia\tr4!, {r2, r3, r4, r5, r6}\n \tmovs\tr5, r4\n \tlsls\tr0, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r2, r4, r5, r6, r7}\n+\tstmia\tr3!, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr5, r4\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r2, r3, r4}\n+\tstmia\tr3!, {r1, r2, r5}\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r2, r4, r6, r7}\n+\tstmia\tr0!, {r2, r3, r4, r6, r7}\n \tmovs\tr5, r4\n ./src/mira/assembly.C:1531\n \tldr\tr0, [sp, #44]\t@ 0x2c\n \tldr.w\tr1, [r0, #372]\t@ 0x174\n \tcmp\tr1, r9\n \tbeq.n\t199142 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4faa>\n ./src/mira/assembly.C:1533\n@@ -808143,96 +808143,96 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr.w\tr1, [r8, #8]\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.w\t198b36 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf499e>\n-\tbeq.n\t199dfc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5c64>\n+\tbeq.n\t199e0c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5c74>\n \tmovs\tr5, r4\n-\tbeq.n\t199e00 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5c68>\n+\tbeq.n\t199e10 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5c78>\n \tmovs\tr5, r4\n-\tldmia\tr3!, {r2, r4, r5, r6, r7}\n+\tldmia\tr3, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr7, r4\n-\tldmia\tr3!, {r2, r4, r5, r6}\n+\tldmia\tr3, {r2, r3, r4, r5, r6}\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldmia\tr1!, {r2, r3, r6, r7}\n+\tldmia\tr1!, {r2, r4, r6, r7}\n \tmovs\tr5, r4\n-\tldr\tr0, [pc, #256]\t@ (199f4c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5db4>)\n+\tldr\tr0, [pc, #288]\t@ (199f6c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5dd4>)\n \tmovs\tr6, r4\n-\tcbnz\tr6, 199ea4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5d0c>\n+\tcbnz\tr6, 199ea6 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5d0e>\n \tmovs\tr5, r4\n-\tldr\tr0, [pc, #80]\t@ (199ea4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5d0c>)\n+\tldr\tr0, [pc, #112]\t@ (199ec4 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf5d2c>)\n \tmovs\tr6, r4\n \tsubs\tr1, #64\t@ 0x40\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r1, r2, r5, r7}\n+\tstmia\tr5!, {r1, r2, r3, r5, r7}\n \tmovs\tr5, r4\n-\tstmia\tr4!, {r1, r2, r5, r6, r7}\n+\tstmia\tr4!, {r1, r2, r3, r5, r6, r7}\n \tmovs\tr5, r4\n-\tsub.w\tr0, r2, #10747904\t@ 0xa40000\n-\tstmia\tr4!, {r2, r3, r6, r7}\n+\tsub.w\tr0, lr, #10747904\t@ 0xa40000\n+\tstmia\tr4!, {r2, r4, r6, r7}\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r1, r5, r6}\n+\tstmia\tr7!, {r1, r3, r5, r6}\n \tmovs\tr5, r4\n-\tadd\tr8, r4\n+\tadd\tr8, r5\n \tmovs\tr6, r4\n-\tadd\tip, r2\n+\tadd\tip, r3\n \tmovs\tr6, r4\n-\tadd\tr8, r1\n+\tadd\tr8, r2\n \tmovs\tr6, r4\n-\tadd\tr4, r3\n+\tadd\tr4, r4\n \tmovs\tr6, r4\n-\tadd\tr0, r0\n+\tadd\tr0, r1\n \tmovs\tr6, r4\n-\tlsls\tr2, r2, #31\n+\tlsls\tr2, r3, #31\n \tmovs\tr0, r5\n-\tmvns\tr0, r4\n+\tmvns\tr0, r5\n \tmovs\tr6, r4\n-\tstmia\tr6!, {r1}\n+\tstmia\tr6!, {r1, r3}\n \tmovs\tr5, r4\n-\tstmia\tr5!, {r1, r2, r3, r7}\n+\tstmia\tr5!, {r1, r2, r4, r7}\n \tmovs\tr5, r4\n-\tstmia\tr5!, {r1, r7}\n+\tstmia\tr5!, {r1, r3, r7}\n \tmovs\tr5, r4\n-\tstmia\tr5!, {r1, r2, r3, r6, r7}\n+\tstmia\tr5!, {r1, r2, r4, r6, r7}\n \tmovs\tr5, r4\n-\trors\tr0, r6\n+\trors\tr0, r7\n \tmovs\tr6, r4\n-\tpush\t{r1, r3, r4, lr}\n+\tpush\t{r1, r5, lr}\n \tmovs\tr5, r4\n-\tsbcs\tr2, r5\n+\tsbcs\tr2, r6\n \tmovs\tr6, r4\n-\tsbcs\tr0, r4\n+\tsbcs\tr0, r5\n \tmovs\tr6, r4\n-\tsbcs\tr6, r2\n+\tsbcs\tr6, r3\n \tmovs\tr6, r4\n-\tstmia\tr2!, {r1, r5, r7}\n+\tstmia\tr2!, {r1, r3, r5, r7}\n \tmovs\tr5, r4\n-\tstmia\tr2!, {r1, r2, r3, r6}\n+\tstmia\tr2!, {r1, r2, r4, r6}\n \tmovs\tr5, r4\n-\tstmia\tr0!, {r2, r4, r6, r7}\n+\tstmia\tr0!, {r2, r3, r4, r6, r7}\n \tmovs\tr5, r4\n-\tstmia\tr5!, {r3, r4, r5, r7}\n+\tstmia\tr5!, {r6, r7}\n \tmovs\tr5, r4\n-\tstmia\tr3!, {r3, r4, r7}\n+\tstmia\tr3!, {r5, r7}\n \tmovs\tr5, r4\n-\tstmia\tr3!, {r2, r5}\n+\tstmia\tr3!, {r2, r3, r5}\n \tmovs\tr5, r4\n-\tstmia\tr3!, {r3, r6}\n+\tstmia\tr3!, {r4, r6}\n \tmovs\tr5, r4\n ./src/mira/assembly.C:1589\n \tldr.w\tr7, [r1, #596]\t@ 0x254\n \tcmp\tr7, r9\n \tbcc.w\t19913a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf4fa2>\n ./src/mira/assembly.C:1590\n \tldr.w\tr1, [pc, #2412]\t@ 19a850 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf66b8>\n@@ -809551,69 +809551,69 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t19a61c , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf6484>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t19a676 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf64de>\n \tb.n\t19a5fc , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf6464>\n \tnop\n-\tsubs\tr6, #204\t@ 0xcc\n+\tsubs\tr6, #212\t@ 0xd4\n \tmovs\tr6, r4\n-\tcbz\tr4, 19a894 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf66fc>\n+\tcbz\tr4, 19a896 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf66fe>\n \tmovs\tr5, r4\n-\tsubs\tr6, #180\t@ 0xb4\n+\tsubs\tr6, #188\t@ 0xbc\n \tmovs\tr6, r4\n-\tnop\t{10}\n-\tmovs\tr5, r4\n-\titet\tvc\n+\tit\tge\n+\tmovge\tr5, r4\n+\tittt\tvc\n \tmovvc\tr5, r4\n-\tstmiavs\tr1!, {r1, r2, r3, r4, r6, r7}\n+\tstmiavc\tr1!, {r1, r2, r5, r6, r7}\n \tmovvc\tr5, r4\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n-\tsubs\tr4, #234\t@ 0xea\n+\tsubs\tr4, #242\t@ 0xf2\n \tmovs\tr6, r4\n-\tsubs\tr4, #222\t@ 0xde\n+\tsubs\tr4, #230\t@ 0xe6\n \tmovs\tr6, r4\n-\tstmia\tr1!, {r1, r2, r6}\n+\tstmia\tr1!, {r1, r2, r3, r6}\n \tmovs\tr5, r4\n \tlsls\tr0, r7, #23\n \tmovs\tr0, r0\n-\tsubs\tr3, #224\t@ 0xe0\n+\tsubs\tr3, #232\t@ 0xe8\n \tmovs\tr6, r4\n-\tsubs\tr3, #212\t@ 0xd4\n+\tsubs\tr3, #220\t@ 0xdc\n \tmovs\tr6, r4\n-\tstmia\tr0!, {r2, r3, r4, r5}\n+\tstmia\tr0!, {r2, r6}\n \tmovs\tr5, r4\n \tlsrs\tr4, r3, #4\n \tmovs\tr0, r0\n-\tpop\t{r3, r6, pc}\n+\tpop\t{r4, r6, pc}\n \tmovs\tr5, r4\n-\tpop\t{r1, r2, r4, r5, r7, pc}\n+\tpop\t{r1, r2, r3, r4, r5, r7, pc}\n \tmovs\tr5, r4\n-\tpop\t{r2, r3, r4, r5, r7, pc}\n+\tpop\t{r2, r6, r7, pc}\n \tmovs\tr5, r4\n-\tpop\t{r2, r3, pc}\n+\tpop\t{r2, r4, pc}\n \tmovs\tr5, r4\n-\tstmia\tr7!, {r4}\n+\tstmia\tr7!, {r2, r3, r4}\n \tmovs\tr4, r4\n-\tsubs\tr6, #238\t@ 0xee\n+\tsubs\tr6, #250\t@ 0xfa\n \tmovs\tr5, r4\n-\tcbnz\tr4, 19a928 \n+\tcbnz\tr4, 19a92a \n \tmovs\tr5, r4\n-\t\t\t@ instruction: 0xb646\n+\t\t\t@ instruction: 0xb64e\n \tmovs\tr5, r4\n boost::system::detail::system_error_category::name() const:\n /usr/include/boost/system/error_code.hpp:311\n \tldr\tr0, [pc, #4]\t@ (19a8b8 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xf6720>)\n \tadd\tr0, pc\n \tbx\tlr\n \tnop\n-\tldrh\tr2, [r1, #48]\t@ 0x30\n+\tldrh\tr2, [r2, #48]\t@ 0x30\n \tmovs\tr5, r4\n \n 0019a8bc :\n boost::system::detail::system_error_category::message(int, char*, unsigned int) const:\n /usr/include/boost/system/error_code.hpp:953\n \tmov\tr0, r1\n /usr/include/boost/system/detail/generic_category.hpp:37\n@@ -810272,25 +810272,25 @@\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr4, #2\n \tmovs\tr1, r6\n \tmovs\tr3, #208\t@ 0xd0\n \tmovs\tr1, r6\n-\t\t\t@ instruction: 0xb882\n+\t\t\t@ instruction: 0xb88a\n \tmovs\tr5, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrd\tr0, r0, [r2], #144\t@ 0x90\n-\t\t\t@ instruction: 0xe8de0024\n-\tvhadd.u16\td0, d14, d22\n+\tstrd\tr0, r0, [lr], #144\t@ 0x90\n+\tstrd\tr0, r0, [sl], #144\t@ 0x90\n+\tvhadd.u32\td0, d6, d22\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n std::vector >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n@@ -810399,15 +810399,15 @@\n \tldr\tr3, [r4, #8]\n \tsubs\tr1, r3, r6\n \tb.n\t19adae \n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #4]\t@ (19adc4 )\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadds\tr6, #126\t@ 0x7e\n+\tadds\tr6, #138\t@ 0x8a\n \tmovs\tr5, r4\n std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned int, signed char const&):\n /usr/include/c++/10/bits/vector.tcc:512\n \tcbnz\tr2, 19adcc \n \tbx\tlr\n /usr/include/c++/10/bits/vector.tcc:509\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -810587,15 +810587,15 @@\n \tmov\tr1, r6\n \tblx\tb684 \n \tb.n\t19ae26 \n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (19af04 )\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tb.n\t19abe4 \n+\tb.n\t19abfc \n \tmovs\tr4, r4\n std::__cxx11::_List_base >::_M_clear():\n /usr/include/c++/10/bits/list.tcc:66\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/list.tcc:70\n \tldr\tr4, [r0, #0]\n /usr/include/c++/10/bits/list.tcc:71\n@@ -810842,15 +810842,15 @@\n \tldr\tr0, [r4, #8]\n \tsub.w\tr1, r0, r9\n \tb.n\t19b0a0 \n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (19b0b8 )\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tb.n\t19a9f8 \n+\tb.n\t19aa10 \n \tmovs\tr4, r4\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t19b204 \n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -811302,15 +811302,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t19b412 \n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (19b440 )\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tb.n\t19b674 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x230>\n+\tb.n\t19b68c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x248>\n \tmovs\tr4, r4\n \n 0019b444 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base>:\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n@@ -811417,15 +811417,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t19b4f0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xac>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (19b510 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xcc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\t\t\t@ instruction: 0xb71c\n+\t\t\t@ instruction: 0xb728\n \tmovs\tr4, r4\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcbz\tr1, 19b552 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x10e>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n@@ -811532,15 +811532,15 @@\n \tmovw\tr8, #65532\t@ 0xfffc\n \tmovt\tr8, #32767\t@ 0x7fff\n \tb.n\t19b5b4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x170>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (19b5e0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x19c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tsvc\t118\t@ 0x76\n+\tsvc\t130\t@ 0x82\n \tmovs\tr4, r4\n StringContainer::status(std::ostream&):\n ./src/mira/../../src/mira/stringcontainer.H:281\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n \tmov\tr5, r1\n /usr/include/c++/10/ostream:611\n@@ -811648,25 +811648,25 @@\n \tmov\tr0, r5\n \tblx\tr2\n \tmov\tr1, r0\n \tb.n\t19b680 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x23c>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n-\tadd\tr6, sp, #520\t@ 0x208\n+\tadd\tr6, sp, #552\t@ 0x228\n \tmovs\tr5, r4\n \tadds\tr0, r3, r5\n \tmovs\tr1, r6\n-\tadd\tr6, sp, #440\t@ 0x1b8\n+\tadd\tr6, sp, #472\t@ 0x1d8\n \tmovs\tr5, r4\n-\tadd\tr6, sp, #400\t@ 0x190\n+\tadd\tr6, sp, #432\t@ 0x1b0\n \tmovs\tr5, r4\n-\tudf\t#238\t@ 0xee\n+\tudf\t#250\t@ 0xfa\n \tmovs\tr4, r4\n-\tadd\tr6, sp, #280\t@ 0x118\n+\tadd\tr6, sp, #312\t@ 0x138\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n StringContainer::dump(std::ostream&):\n ./src/mira/../../src/mira/stringcontainer.H:294\n \tldr\tr2, [pc, #236]\t@ (19b7bc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x378>)\n \tldr\tr3, [pc, #240]\t@ (19b7c0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x37c>)\n@@ -811794,19 +811794,19 @@\n ./src/mira/../../src/mira/stringcontainer.H:305\n \tb.w\tb554 \n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tadds\tr0, r2, r2\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #608\t@ 0x260\n+\tadd\tr5, sp, #640\t@ 0x280\n \tmovs\tr5, r4\n-\tadd\tr5, sp, #624\t@ 0x270\n+\tadd\tr5, sp, #656\t@ 0x290\n \tmovs\tr5, r4\n-\tadd\tr5, sp, #360\t@ 0x168\n+\tadd\tr5, sp, #392\t@ 0x188\n \tmovs\tr5, r4\n \tasrs\tr4, r0, #31\n \tmovs\tr1, r6\n StringContainer::status(std::ostream&):\n ./src/mira/../../src/mira/stringcontainer.H:281\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n@@ -811916,25 +811916,25 @@\n \tmov\tr0, r5\n \tblx\tr2\n \tmov\tr1, r0\n \tb.n\t19b870 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x42c>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n-\tadd\tr4, sp, #584\t@ 0x248\n+\tadd\tr4, sp, #616\t@ 0x268\n \tmovs\tr5, r4\n \tasrs\tr0, r5, #29\n \tmovs\tr1, r6\n-\tadd\tr4, sp, #504\t@ 0x1f8\n+\tadd\tr4, sp, #536\t@ 0x218\n \tmovs\tr5, r4\n-\tadd\tr4, sp, #464\t@ 0x1d0\n+\tadd\tr4, sp, #496\t@ 0x1f0\n \tmovs\tr5, r4\n-\tbgt.n\t19b8b0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x46c>\n+\tble.n\t19b8c8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x484>\n \tmovs\tr4, r4\n-\tadd\tr4, sp, #344\t@ 0x158\n+\tadd\tr4, sp, #376\t@ 0x178\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n StringContainer::dump(std::ostream&):\n ./src/mira/../../src/mira/stringcontainer.H:294\n \tldr\tr2, [pc, #236]\t@ (19b9ac >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x568>)\n \tldr\tr3, [pc, #240]\t@ (19b9b0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x56c>)\n@@ -812062,19 +812062,19 @@\n ./src/mira/../../src/mira/stringcontainer.H:305\n \tb.w\tb554 \n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tasrs\tr0, r4, #26\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #672\t@ 0x2a0\n+\tadd\tr3, sp, #704\t@ 0x2c0\n \tmovs\tr5, r4\n-\tadd\tr3, sp, #688\t@ 0x2b0\n+\tadd\tr3, sp, #720\t@ 0x2d0\n \tmovs\tr5, r4\n-\tadd\tr3, sp, #424\t@ 0x1a8\n+\tadd\tr3, sp, #456\t@ 0x1c8\n \tmovs\tr5, r4\n \tasrs\tr4, r2, #23\n \tmovs\tr1, r6\n StringContainer::status(std::ostream&):\n ./src/mira/../../src/mira/stringcontainer.H:281\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n@@ -812183,25 +812183,25 @@\n \tbeq.n\t19ba62 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x61e>\n \tmov\tr0, r5\n \tblx\tr2\n \tmov\tr1, r0\n \tb.n\t19ba62 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x61e>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n-\tadd\tr2, sp, #648\t@ 0x288\n+\tadd\tr2, sp, #680\t@ 0x2a8\n \tmovs\tr5, r4\n \tasrs\tr0, r7, #21\n \tmovs\tr1, r6\n-\tadd\tr2, sp, #568\t@ 0x238\n+\tadd\tr2, sp, #600\t@ 0x258\n \tmovs\tr5, r4\n-\tadd\tr2, sp, #528\t@ 0x210\n+\tadd\tr2, sp, #560\t@ 0x230\n \tmovs\tr5, r4\n-\tblt.n\t19babc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x678>\n+\tblt.n\t19bad4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x690>\n \tmovs\tr4, r4\n-\tadd\tr2, sp, #400\t@ 0x190\n+\tadd\tr2, sp, #432\t@ 0x1b0\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n StringContainer::dump(std::ostream&):\n ./src/mira/../../src/mira/stringcontainer.H:294\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -812329,19 +812329,19 @@\n ./src/mira/../../src/mira/stringcontainer.H:305\n \tb.w\tb554 \n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tasrs\tr0, r5, #18\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr1, sp, #728\t@ 0x2d8\n+\tadd\tr1, sp, #760\t@ 0x2f8\n \tmovs\tr5, r4\n-\tadd\tr1, sp, #744\t@ 0x2e8\n+\tadd\tr1, sp, #776\t@ 0x308\n \tmovs\tr5, r4\n-\tadd\tr1, sp, #488\t@ 0x1e8\n+\tadd\tr1, sp, #520\t@ 0x208\n \tmovs\tr5, r4\n \tasrs\tr0, r5, #15\n \tmovs\tr1, r6\n std::vector >::_M_insert_rval(__gnu_cxx::__normal_iterator > >, unsigned char&&):\n /usr/include/c++/10/bits/vector.tcc:340\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -812501,15 +812501,15 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t19bc58 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x814>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (19bcc0 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x87c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadd\tr7, sp, #424\t@ 0x1a8\n+\tadd\tr7, sp, #472\t@ 0x1d8\n \tmovs\tr4, r4\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcbz\tr1, 19bd3a >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x8f6>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r1\n@@ -812607,15 +812607,15 @@\n \tldr\tr0, [r4, #8]\n \tsub.w\tr1, r0, r9\n \tb.n\t19bd58 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x914>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (19bd70 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x92c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tbvc.n\t19bd40 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x8fc>\n+\tbvc.n\t19bd58 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x914>\n \tmovs\tr4, r4\n bool loadVector(std::vector >&, std::__cxx11::basic_string, std::allocator >, unsigned char):\n ./src/mira/../../src/util/fileanddisk.H:164\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr9, r2\n \tldr\tr2, [pc, #256]\t@ (19be7c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xa38>)\n \tldr\tr3, [pc, #256]\t@ (19be80 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xa3c>)\n@@ -812765,27 +812765,27 @@\n \tb.n\t19bdc4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0x980>\n ./src/mira/../../src/util/fileanddisk.H:201\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tasrs\tr0, r4, #7\n \tmovs\tr1, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r2, r6}\n+\tldmia\tr0!, {r2, r3, r6}\n \tmovs\tr1, r5\n \tasrs\tr0, r2, #7\n \tmovs\tr1, r6\n \tasrs\tr6, r5, #5\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #496\t@ (adr r6, 19c088 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xc44>)\n+\tadd\tr6, pc, #528\t@ (adr r6, 19c0a8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xc64>)\n \tmovs\tr5, r4\n-\tadd\tr6, pc, #448\t@ (adr r6, 19c05c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xc18>)\n+\tadd\tr6, pc, #480\t@ (adr r6, 19c07c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xc38>)\n \tmovs\tr5, r4\n-\tcdp2\t0, 12, cr0, cr10, cr6, {1}\n+\tcdp2\t0, 13, cr0, cr2, cr6, {1}\n StringContainer::addEntryNoDoubleCheck(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/../../src/mira/stringcontainer.H:250\n \tldr\tr2, [pc, #388]\t@ (19c028 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xbe4>)\n \tldr\tr3, [pc, #392]\t@ (19c02c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xbe8>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r0\n@@ -812999,21 +812999,21 @@\n \tmovs\tr0, r0\n \tasrs\tr6, r5, #2\n \tmovs\tr1, r6\n \tasrs\tr4, r1, #1\n \tmovs\tr1, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #528\t@ (adr r5, 19c250 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xe0c>)\n+\tadd\tr5, pc, #560\t@ (adr r5, 19c270 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xe2c>)\n \tmovs\tr5, r4\n-\tadd\tr5, pc, #696\t@ (adr r5, 19c2fc >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xeb8>)\n+\tadd\tr5, pc, #728\t@ (adr r5, 19c31c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xed8>)\n \tmovs\tr5, r4\n-\tadd\tr5, pc, #672\t@ (adr r5, 19c2e8 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xea4>)\n+\tadd\tr5, pc, #704\t@ (adr r5, 19c308 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xec4>)\n \tmovs\tr5, r4\n-\tadd\tr5, pc, #664\t@ (adr r5, 19c2e4 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xea0>)\n+\tadd\tr5, pc, #696\t@ (adr r5, 19c304 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xec0>)\n \tmovs\tr5, r4\n \tlsrs\tr4, r1, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -813124,15 +813124,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t19c104 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xcc0>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (19c124 >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xce0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr3, sp, #32\n+\tadd\tr3, sp, #80\t@ 0x50\n \tmovs\tr4, r4\n void std::_Destroy_aux::__destroy(ReadLotStat*, ReadLotStat*):\n /usr/include/c++/10/bits/stl_construct.h:149\n \tpush\t{r3, r4, r5, lr}\n /usr/include/c++/10/bits/stl_construct.h:151\n \tcmp\tr0, r1\n /usr/include/c++/10/bits/stl_construct.h:149\n@@ -817250,15 +817250,15 @@\n \tstr\tr3, [r1, #20]\n \tb.n\t19de9e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (19e038 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x204>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrh\tr4, [r6, #30]\n+\tldrh\tr0, [r0, #32]\n \tmovs\tr4, r4\n void std::__insertion_sort<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Iter_comp_iter, unsigned short const&, unsigned short const&>, boost::_bi::list3*>, boost::arg<1>, boost::arg<2> > > > >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Iter_comp_iter, unsigned short const&, unsigned short const&>, boost::_bi::list3*>, boost::arg<1>, boost::arg<2> > > >):\n /usr/include/c++/10/bits/stl_algo.h:1839\n \tsub\tsp, #8\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r0\n /usr/include/c++/10/bits/stl_algo.h:1842\n@@ -819506,15 +819506,15 @@\n \tmovs\tr0, r6\n \tlsrs\tr4, r2, #19\n \tmovs\tr0, r0\n \tsvc\t230\t@ 0xe6\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr6, [r0, #21]\n+\tstrb\tr6, [r1, #21]\n \tmovs\tr5, r4\n StringContainer::addEntry(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/../../src/mira/stringcontainer.H:204\n \tldr\tr2, [pc, #628]\t@ (19f2c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1490>)\n \tldr\tr3, [pc, #632]\t@ (19f2c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1494>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -819863,24 +819863,24 @@\n \tmovs\tr0, r0\n \tsvc\t2\n \tmovs\tr0, r6\n \tudf\t#240\t@ 0xf0\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r2, #16]\n+\tstrb\tr0, [r3, #16]\n \tmovs\tr5, r4\n-\tldr\tr2, [pc, #672]\t@ (19f580 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x174c>)\n+\tldr\tr2, [pc, #704]\t@ (19f5a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x176c>)\n \tmovs\tr0, r5\n-\tcdp2\t0, 9, cr0, cr4, cr4, {1}\n-\tstrb\tr0, [r7, #12]\n+\tcdp2\t0, 10, cr0, cr0, cr4, {1}\n+\tstrb\tr0, [r0, #13]\n \tmovs\tr5, r4\n-\tstrb\tr2, [r6, #12]\n+\tstrb\tr2, [r7, #12]\n \tmovs\tr5, r4\n-\tstrb\tr0, [r6, #12]\n+\tstrb\tr0, [r7, #12]\n \tmovs\tr5, r4\n \tlsrs\tr4, r2, #11\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -820922,15 +820922,15 @@\n \tmovs\tr0, r6\n \tlsls\tr4, r3, #25\n \tmovs\tr0, r0\n \tbpl.n\t19fba8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d74>\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [r3, #44]\t@ 0x2c\n+\tldr\tr6, [r4, #44]\t@ 0x2c\n \tmovs\tr5, r4\n StringContainer::addEntry(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/../../src/mira/stringcontainer.H:204\n \tldr\tr2, [pc, #612]\t@ (19fd1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ee8>)\n \tldr\tr3, [pc, #616]\t@ (19fd20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1eec>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -821276,24 +821276,24 @@\n \tmovs\tr0, r0\n \tbmi.n\t19fc5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e28>\n \tmovs\tr0, r6\n \tbmi.n\t19fc3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e08>\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [r6, #24]\n+\tldr\tr2, [r7, #24]\n \tmovs\tr5, r4\n-\teors\tr2, r1\n+\teors\tr2, r2\n \tmovs\tr0, r5\n-\tbics.w\tr0, r6, #10747904\t@ 0xa40000\n-\tldr\tr2, [r3, #12]\n+\torr.w\tr0, r2, #10747904\t@ 0xa40000\n+\tldr\tr2, [r4, #12]\n \tmovs\tr5, r4\n-\tldr\tr4, [r2, #12]\n+\tldr\tr4, [r3, #12]\n \tmovs\tr5, r4\n-\tldr\tr2, [r2, #12]\n+\tldr\tr2, [r3, #12]\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #7\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -822295,15 +822295,15 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r1, #13\n \tmovs\tr0, r0\n \tldmia\tr3!, {r2}\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [r0, #12]\n+\tstr\tr6, [r1, #12]\n \tmovs\tr5, r4\n StringContainer::addEntry(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/../../src/mira/stringcontainer.H:204\n \tldr\tr2, [pc, #544]\t@ (1a06ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x28b8>)\n \tldr\tr3, [pc, #548]\t@ (1a06f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x28bc>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -822602,24 +822602,24 @@\n \tmovs\tr0, r0\n \tldmia\tr2, {r1, r2, r7}\n \tmovs\tr0, r6\n \tldmia\tr2, {r2, r4, r5, r6}\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrsh\tr4, [r1, r7]\n+\tldrsh\tr4, [r2, r7]\n \tmovs\tr5, r4\n-\tadds\tr6, #100\t@ 0x64\n+\tadds\tr6, #108\t@ 0x6c\n \tmovs\tr0, r5\n-\torr.w\tr0, r4, r4, asr #32\n-\tldrsh\tr0, [r5, r3]\n+\torrs.w\tr0, r0, r4, asr #32\n+\tldrsh\tr0, [r6, r3]\n \tmovs\tr5, r4\n-\tldrsh\tr2, [r4, r3]\n+\tldrsh\tr2, [r5, r3]\n \tmovs\tr5, r4\n-\tldrsh\tr0, [r4, r3]\n+\tldrsh\tr0, [r5, r3]\n \tmovs\tr5, r4\n \tlsrs\tr0, r6, #18\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -829032,111 +829032,111 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [sp, #936]\t@ 0x3a8\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr4, #100\t@ 0x64\n+\tadds\tr4, #108\t@ 0x6c\n \tmovs\tr5, r4\n-\tadds\tr4, #98\t@ 0x62\n+\tadds\tr4, #106\t@ 0x6a\n \tmovs\tr5, r4\n-\tadds\tr4, #84\t@ 0x54\n+\tadds\tr4, #92\t@ 0x5c\n \tmovs\tr5, r4\n-\tadds\tr4, #70\t@ 0x46\n+\tadds\tr4, #78\t@ 0x4e\n \tmovs\tr5, r4\n-\tadds\tr4, #56\t@ 0x38\n+\tadds\tr4, #64\t@ 0x40\n \tmovs\tr5, r4\n-\tadds\tr4, #42\t@ 0x2a\n+\tadds\tr4, #50\t@ 0x32\n \tmovs\tr5, r4\n-\tadds\tr4, #28\n+\tadds\tr4, #36\t@ 0x24\n \tmovs\tr5, r4\n-\tadds\tr4, #14\n+\tadds\tr4, #22\n \tmovs\tr5, r4\n-\tadds\tr4, #0\n+\tadds\tr4, #8\n \tmovs\tr5, r4\n-\tadds\tr3, #242\t@ 0xf2\n+\tadds\tr3, #250\t@ 0xfa\n \tmovs\tr5, r4\n-\tadds\tr3, #228\t@ 0xe4\n+\tadds\tr3, #236\t@ 0xec\n \tmovs\tr5, r4\n-\tadds\tr3, #214\t@ 0xd6\n+\tadds\tr3, #222\t@ 0xde\n \tmovs\tr5, r4\n-\tadds\tr3, #200\t@ 0xc8\n+\tadds\tr3, #208\t@ 0xd0\n \tmovs\tr5, r4\n-\tadds\tr3, #160\t@ 0xa0\n+\tadds\tr3, #168\t@ 0xa8\n \tmovs\tr5, r4\n-\tldr\tr0, [r1, #60]\t@ 0x3c\n+\tldr\tr0, [r2, #60]\t@ 0x3c\n \tmovs\tr7, r4\n+\tadds\tr3, #146\t@ 0x92\n+\tmovs\tr5, r4\n \tadds\tr3, #138\t@ 0x8a\n \tmovs\tr5, r4\n \tadds\tr3, #130\t@ 0x82\n \tmovs\tr5, r4\n \tadds\tr3, #122\t@ 0x7a\n \tmovs\tr5, r4\n \tadds\tr3, #114\t@ 0x72\n \tmovs\tr5, r4\n-\tadds\tr3, #106\t@ 0x6a\n+\tadds\tr3, #102\t@ 0x66\n \tmovs\tr5, r4\n \tadds\tr3, #94\t@ 0x5e\n \tmovs\tr5, r4\n \tadds\tr3, #86\t@ 0x56\n \tmovs\tr5, r4\n+\tadds\tr3, #82\t@ 0x52\n+\tmovs\tr5, r4\n \tadds\tr3, #78\t@ 0x4e\n \tmovs\tr5, r4\n \tadds\tr3, #74\t@ 0x4a\n \tmovs\tr5, r4\n \tadds\tr3, #70\t@ 0x46\n \tmovs\tr5, r4\n-\tadds\tr3, #66\t@ 0x42\n-\tmovs\tr5, r4\n \tadds\tr3, #62\t@ 0x3e\n \tmovs\tr5, r4\n-\tadds\tr3, #54\t@ 0x36\n+\tadds\tr3, #62\t@ 0x3e\n \tmovs\tr5, r4\n \tadds\tr3, #54\t@ 0x36\n \tmovs\tr5, r4\n \tadds\tr3, #46\t@ 0x2e\n \tmovs\tr5, r4\n-\tadds\tr3, #38\t@ 0x26\n-\tmovs\tr5, r4\n-\tldr\tr7, [pc, #384]\t@ (1a3ae0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5cac>)\n+\tldr\tr7, [pc, #416]\t@ (1a3b00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ccc>)\n \tmovs\tr5, r4\n-\tadds\tr3, #6\n+\tadds\tr3, #14\n \tmovs\tr5, r4\n-\tldr\tr2, [r1, #32]\n+\tldr\tr2, [r2, #32]\n \tmovs\tr7, r4\n-\tadds\tr2, #242\t@ 0xf2\n+\tadds\tr2, #250\t@ 0xfa\n \tmovs\tr5, r4\n-\tadds\tr2, #220\t@ 0xdc\n+\tadds\tr2, #228\t@ 0xe4\n \tmovs\tr5, r4\n-\tadds\tr2, #198\t@ 0xc6\n+\tadds\tr2, #206\t@ 0xce\n \tmovs\tr5, r4\n-\tadds\tr2, #176\t@ 0xb0\n+\tadds\tr2, #184\t@ 0xb8\n \tmovs\tr5, r4\n-\tadds\tr2, #154\t@ 0x9a\n+\tadds\tr2, #162\t@ 0xa2\n \tmovs\tr5, r4\n-\tadds\tr2, #132\t@ 0x84\n+\tadds\tr2, #140\t@ 0x8c\n \tmovs\tr5, r4\n-\tadds\tr2, #110\t@ 0x6e\n+\tadds\tr2, #118\t@ 0x76\n \tmovs\tr5, r4\n-\tadds\tr2, #88\t@ 0x58\n+\tadds\tr2, #96\t@ 0x60\n \tmovs\tr5, r4\n-\tadds\tr2, #66\t@ 0x42\n+\tadds\tr2, #74\t@ 0x4a\n \tmovs\tr5, r4\n-\tadds\tr2, #44\t@ 0x2c\n+\tadds\tr2, #52\t@ 0x34\n \tmovs\tr5, r4\n-\tadds\tr2, #22\n+\tadds\tr2, #30\n \tmovs\tr5, r4\n-\tadds\tr2, #0\n+\tadds\tr2, #8\n \tmovs\tr5, r4\n-\tadds\tr1, #234\t@ 0xea\n+\tadds\tr1, #242\t@ 0xf2\n \tmovs\tr5, r4\n \tstr\tr6, [sp, #824]\t@ 0x338\n \tmovs\tr0, r6\n-\tldr\tr5, [pc, #344]\t@ (1a3afc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5cc8>)\n+\tldr\tr5, [pc, #376]\t@ (1a3b1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ce8>)\n \tmovs\tr5, r4\n \tstr\tr6, [sp, #680]\t@ 0x2a8\n \tmovs\tr0, r6\n Contig::finalise():\n ./src/mira/contig.C:4357\n \tldrb.w\tr1, [r0, #60]\t@ 0x3c\n \tcbz\tr1, 1a39b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5b7c>\n@@ -829518,17 +829518,17 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr3, [sp, #520]\t@ 0x208\n \tmovs\tr0, r6\n \tstr\tr3, [sp, #472]\t@ 0x1d8\n \tmovs\tr0, r6\n-\tcmp\tr6, #82\t@ 0x52\n+\tcmp\tr6, #90\t@ 0x5a\n \tmovs\tr5, r4\n-\tcmp\tr6, #68\t@ 0x44\n+\tcmp\tr6, #76\t@ 0x4c\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::getRealReadPos(unsigned int, PlacedContigReads::const_iterator const&) const:\n ./src/mira/contig.C:5908\n@@ -829753,17 +829753,17 @@\n \tb.n\t1a3e2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ff8>\n \tstr\tr1, [sp, #704]\t@ 0x2c0\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr1, [sp, #656]\t@ 0x290\n \tmovs\tr0, r6\n-\tcmp\tr4, #236\t@ 0xec\n+\tcmp\tr4, #244\t@ 0xf4\n \tmovs\tr5, r4\n-\tcmp\tr4, #222\t@ 0xde\n+\tcmp\tr4, #230\t@ 0xe6\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::deleteBaseInRead(int, int):\n ./src/mira/contig.C:5243\n@@ -829853,17 +829853,17 @@\n \tb.n\t1a3ee4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x60b0>\n \tstr\tr0, [sp, #992]\t@ 0x3e0\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [sp, #944]\t@ 0x3b0\n \tmovs\tr0, r6\n-\tcmp\tr4, #52\t@ 0x34\n+\tcmp\tr4, #60\t@ 0x3c\n \tmovs\tr5, r4\n-\tcmp\tr4, #154\t@ 0x9a\n+\tcmp\tr4, #162\t@ 0xa2\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::insertBaseInRead(char, int, int, unsigned char):\n ./src/mira/contig.C:5455\n@@ -829953,17 +829953,17 @@\n \tb.n\t1a3f9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6168>\n \tstr\tr0, [sp, #256]\t@ 0x100\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [sp, #208]\t@ 0xd0\n \tmovs\tr0, r6\n-\tcmp\tr3, #124\t@ 0x7c\n+\tcmp\tr3, #132\t@ 0x84\n \tmovs\tr5, r4\n-\tcmp\tr4, #42\t@ 0x2a\n+\tcmp\tr4, #50\t@ 0x32\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::getBaseInRead(int, PlacedContigReads::const_iterator const&) const:\n ./src/mira/contig.C:5588\n@@ -830228,17 +830228,17 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr2, [r7, #58]\t@ 0x3a\n \tmovs\tr0, r6\n \tldrh\tr0, [r6, #52]\t@ 0x34\n \tmovs\tr0, r6\n-\tcmp\tr2, #198\t@ 0xc6\n+\tcmp\tr2, #206\t@ 0xce\n \tmovs\tr5, r4\n-\tcmp\tr2, #200\t@ 0xc8\n+\tcmp\tr2, #208\t@ 0xd0\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::getQualityInRead(int, PlacedContigReads::const_iterator const&) const:\n ./src/mira/contig.C:5615\n@@ -830516,17 +830516,17 @@\n \tmovs\tr0, r0\n \tldrh\tr6, [r7, #42]\t@ 0x2a\n \tmovs\tr0, r6\n \tldrh\tr4, [r7, #36]\t@ 0x24\n \tmovs\tr0, r6\n \tldrh\tr6, [r0, #34]\t@ 0x22\n \tmovs\tr0, r6\n-\tcmp\tr0, #184\t@ 0xb8\n+\tcmp\tr0, #192\t@ 0xc0\n \tmovs\tr5, r4\n-\tcmp\tr1, #42\t@ 0x2a\n+\tcmp\tr1, #50\t@ 0x32\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::changeBaseInRead(char, int, int, unsigned char):\n ./src/mira/contig.C:5644\n@@ -830616,17 +830616,17 @@\n \tb.n\t1a4464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6630>\n \tldrh\tr0, [r7, #26]\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r5, #26]\n \tmovs\tr0, r6\n-\tmovs\tr6, #180\t@ 0xb4\n+\tmovs\tr6, #188\t@ 0xbc\n \tmovs\tr5, r4\n-\tcmp\tr0, #174\t@ 0xae\n+\tcmp\tr0, #182\t@ 0xb6\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::addTagToRead(unsigned int, unsigned int, int, multitag_t&):\n ./src/mira/contig.C:5721\n@@ -830716,17 +830716,17 @@\n \tb.n\t1a451c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x66e8>\n \tldrh\tr0, [r0, #22]\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r6, #20]\n \tmovs\tr0, r6\n-\tmovs\tr5, #252\t@ 0xfc\n+\tmovs\tr6, #4\n \tmovs\tr5, r4\n-\tcmp\tr0, #94\t@ 0x5e\n+\tcmp\tr0, #102\t@ 0x66\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::updateTagBaseInserted(unsigned int):\n ./src/mira/contig.C:5881\n@@ -830968,17 +830968,17 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr2, [r7, #14]\n \tmovs\tr0, r6\n \tldrh\tr0, [r5, #6]\n \tmovs\tr0, r6\n-\tmovs\tr7, #34\t@ 0x22\n+\tmovs\tr7, #42\t@ 0x2a\n \tmovs\tr5, r4\n-\tmovs\tr7, #20\n+\tmovs\tr7, #28\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::transposeReadSRMTagsToContig():\n ./src/mira/contig.C:5926\n@@ -831068,17 +831068,17 @@\n \tb.n\t1a47bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6988>\n \tldrh\tr0, [r4, #0]\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r2, #0]\n \tmovs\tr0, r6\n-\tmovs\tr3, #92\t@ 0x5c\n+\tmovs\tr3, #100\t@ 0x64\n \tmovs\tr5, r4\n-\tmovs\tr6, #126\t@ 0x7e\n+\tmovs\tr6, #134\t@ 0x86\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::errorstatus_t::dumpStatus(bool, char const*):\n ./src/mira/contig.C:7018\n@@ -831658,89 +831658,89 @@\n \tmovs\tr0, r0\n \tstrh\tr4, [r2, #58]\t@ 0x3a\n \tmovs\tr0, r6\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tstrh\tr2, [r7, #54]\t@ 0x36\n \tmovs\tr0, r6\n-\tmovs\tr7, #132\t@ 0x84\n+\tmovs\tr7, #140\t@ 0x8c\n \tmovs\tr5, r4\n \tstrh\tr6, [r2, #54]\t@ 0x36\n \tmovs\tr0, r6\n-\tmovs\tr5, #148\t@ 0x94\n+\tmovs\tr5, #156\t@ 0x9c\n \tmovs\tr5, r4\n \tstrh\tr2, [r6, #52]\t@ 0x34\n \tmovs\tr0, r6\n-\tmovs\tr5, #116\t@ 0x74\n+\tmovs\tr5, #124\t@ 0x7c\n \tmovs\tr5, r4\n \tstrh\tr4, [r1, #52]\t@ 0x34\n \tmovs\tr0, r6\n-\tmovs\tr5, #92\t@ 0x5c\n+\tmovs\tr5, #100\t@ 0x64\n \tmovs\tr5, r4\n \tstrh\tr6, [r4, #50]\t@ 0x32\n \tmovs\tr0, r6\n-\tmovs\tr5, #108\t@ 0x6c\n+\tmovs\tr5, #116\t@ 0x74\n \tmovs\tr5, r4\n \tstrh\tr2, [r0, #50]\t@ 0x32\n \tmovs\tr0, r6\n-\tmovs\tr5, #40\t@ 0x28\n+\tmovs\tr5, #48\t@ 0x30\n \tmovs\tr5, r4\n \tstrh\tr6, [r3, #48]\t@ 0x30\n \tmovs\tr0, r6\n-\tmovs\tr5, #64\t@ 0x40\n+\tmovs\tr5, #72\t@ 0x48\n \tmovs\tr5, r4\n \tstrh\tr2, [r7, #46]\t@ 0x2e\n \tmovs\tr0, r6\n-\tmovs\tr5, #92\t@ 0x5c\n+\tmovs\tr5, #100\t@ 0x64\n \tmovs\tr5, r4\n \tstrh\tr6, [r2, #46]\t@ 0x2e\n \tmovs\tr0, r6\n-\tmovs\tr5, #92\t@ 0x5c\n+\tmovs\tr5, #100\t@ 0x64\n \tmovs\tr5, r4\n \tstrh\tr2, [r6, #44]\t@ 0x2c\n \tmovs\tr0, r6\n-\tmovs\tr4, #244\t@ 0xf4\n+\tmovs\tr4, #252\t@ 0xfc\n \tmovs\tr5, r4\n \tstrh\tr6, [r1, #44]\t@ 0x2c\n \tmovs\tr0, r6\n-\tmovs\tr5, #56\t@ 0x38\n+\tmovs\tr5, #64\t@ 0x40\n \tmovs\tr5, r4\n \tstrh\tr2, [r5, #42]\t@ 0x2a\n \tmovs\tr0, r6\n-\tmovs\tr5, #128\t@ 0x80\n+\tmovs\tr5, #136\t@ 0x88\n \tmovs\tr5, r4\n \tstrh\tr6, [r0, #42]\t@ 0x2a\n \tmovs\tr0, r6\n-\tmovs\tr5, #12\n+\tmovs\tr5, #20\n \tmovs\tr5, r4\n \tstrh\tr4, [r4, #40]\t@ 0x28\n \tmovs\tr0, r6\n-\tmovs\tr5, #10\n+\tmovs\tr5, #18\n \tmovs\tr5, r4\n \tstrh\tr2, [r0, #40]\t@ 0x28\n \tmovs\tr0, r6\n-\tmovs\tr5, #0\n+\tmovs\tr5, #8\n \tmovs\tr5, r4\n \tstrh\tr6, [r3, #38]\t@ 0x26\n \tmovs\tr0, r6\n-\tmovs\tr5, #32\n+\tmovs\tr5, #40\t@ 0x28\n \tmovs\tr5, r4\n \tstrh\tr4, [r7, #36]\t@ 0x24\n \tmovs\tr0, r6\n-\tmovs\tr5, #32\n+\tmovs\tr5, #40\t@ 0x28\n \tmovs\tr5, r4\n \tstrh\tr2, [r1, #36]\t@ 0x24\n \tmovs\tr0, r6\n \tstrh\tr2, [r6, #34]\t@ 0x22\n \tmovs\tr0, r6\n-\tmovs\tr4, #238\t@ 0xee\n+\tmovs\tr4, #246\t@ 0xf6\n \tmovs\tr5, r4\n-\tmovs\tr4, #126\t@ 0x7e\n+\tmovs\tr4, #134\t@ 0x86\n \tmovs\tr5, r4\n-\tmovs\tr4, #128\t@ 0x80\n+\tmovs\tr4, #136\t@ 0x88\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::analyseADSForCuttingBackCERMap(AlignedDualSeq const&, int):\n ./src/mira/contig.C:3271\n@@ -832673,25 +832673,25 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr0, [r4, #18]\n \tmovs\tr0, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tmovs\tr2, #110\t@ 0x6e\n+\tmovs\tr2, #118\t@ 0x76\n \tmovs\tr5, r4\n-\tmovs\tr1, #226\t@ 0xe2\n+\tmovs\tr1, #234\t@ 0xea\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr0, #148\t@ 0x94\n+\tmovs\tr0, #156\t@ 0x9c\n \tmovs\tr5, r4\n-\tmovs\tr0, #154\t@ 0x9a\n+\tmovs\tr0, #162\t@ 0xa2\n \tmovs\tr5, r4\n \tldrb\tr2, [r6, #25]\n \tmovs\tr0, r6\n Contig::updateTagBaseDeleted(unsigned int):\n ./src/mira/contig.C:5850\n \tldr\tr2, [pc, #272]\t@ (1a54dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x76a8>)\n \tldr\tr3, [pc, #276]\t@ (1a54e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x76ac>)\n@@ -832850,17 +832850,17 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r0, #14]\n \tmovs\tr0, r6\n \tldrb\tr6, [r7, #12]\n \tmovs\tr0, r6\n-\tadds\tr4, r3, r5\n+\tadds\tr4, r4, r5\n \tmovs\tr5, r4\n-\tadds\tr2, r5, #2\n+\tadds\tr2, r6, #2\n \tmovs\tr5, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::deleteTagsInReads(StringContainer::Entry):\n ./src/mira/contig.C:6908\n@@ -833136,19 +833136,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr6, #218\t@ 0xda\n+\tsubs\tr6, #230\t@ 0xe6\n \tmovs\tr4, r4\n-\tsubs\tr6, #214\t@ 0xd6\n+\tsubs\tr6, #226\t@ 0xe2\n \tmovs\tr4, r4\n-\tstrb\tr6, [r2, r4]\n+\tstrb\tr6, [r3, r4]\n \tmovs\tr6, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -833337,19 +833337,19 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr2, [r7, #31]\n \tmovs\tr0, r6\n \tstrb\tr4, [r6, #30]\n \tmovs\tr0, r6\n-\tsubs\tr5, #44\t@ 0x2c\n+\tsubs\tr5, #56\t@ 0x38\n \tmovs\tr4, r4\n-\tsubs\tr5, #40\t@ 0x28\n+\tsubs\tr5, #52\t@ 0x34\n \tmovs\tr4, r4\n-\tstrh\tr0, [r5, r5]\n+\tstrh\tr0, [r6, r5]\n \tmovs\tr6, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -833676,33 +833676,33 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr0, [r3, #26]\n \tmovs\tr0, r6\n \tstrb\tr0, [r1, #26]\n \tmovs\tr0, r6\n-\tadds\tr4, r7, r0\n+\tadds\tr4, r0, r1\n \tmovs\tr5, r4\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tcmp\tr6, #54\t@ 0x36\n+\tcmp\tr6, #62\t@ 0x3e\n \tmovs\tr5, r4\n-\tasrs\tr0, r5, #28\n+\tasrs\tr0, r6, #28\n \tmovs\tr5, r4\n-\tasrs\tr6, r3, #28\n+\tasrs\tr6, r4, #28\n \tmovs\tr5, r4\n-\tasrs\tr0, r1, #28\n+\tasrs\tr0, r2, #28\n \tmovs\tr5, r4\n Contig::getNumBackbones() const:\n ./src/mira/contig.C:909\n \tldr\tr2, [pc, #892]\t@ (1a5e90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x805c>)\n \tldr\tr3, [pc, #896]\t@ (1a5e94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8060>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tadd\tr2, pc\n@@ -834173,19 +834173,19 @@\n \tmovs\tr0, r0\n \tstrb\tr4, [r7, #16]\n \tmovs\tr0, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tstrb\tr2, [r4, #12]\n \tmovs\tr0, r6\n-\tsubs\tr0, #106\t@ 0x6a\n+\tsubs\tr0, #118\t@ 0x76\n \tmovs\tr4, r4\n-\tsubs\tr0, #94\t@ 0x5e\n+\tsubs\tr0, #106\t@ 0x6a\n \tmovs\tr4, r4\n-\tstr\tr6, [r5, #0]\n+\tstr\tr6, [r6, #0]\n \tmovs\tr6, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -835408,40 +835408,40 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr6, r4\n+\tmovs\tr6, r5\n \tmovs\tr5, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr7, #222\t@ 0xde\n+\tcmp\tr7, #234\t@ 0xea\n \tmovs\tr4, r4\n-\tcmp\tr7, #218\t@ 0xda\n+\tcmp\tr7, #230\t@ 0xe6\n \tmovs\tr4, r4\n-\tmov\tr2, r3\n+\tmov\tr2, r4\n \tmovs\tr6, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr4, r0, #15\n+\tlsrs\tr4, r1, #15\n \tmovs\tr5, r4\n-\tlsrs\tr6, r6, #14\n+\tlsrs\tr6, r7, #14\n \tmovs\tr5, r4\n-\tcdp2\t0, 2, cr0, cr10, cr4, {1}\n-\tcmp\tr6, #122\t@ 0x7a\n+\tcdp2\t0, 3, cr0, cr2, cr4, {1}\n+\tcmp\tr6, #134\t@ 0x86\n \tmovs\tr4, r4\n-\tcmp\tr6, #118\t@ 0x76\n+\tcmp\tr6, #130\t@ 0x82\n \tmovs\tr4, r4\n-\tadd\tlr, r6\n+\tadd\tlr, r7\n \tmovs\tr6, r4\n /usr/include/c++/10/sstream:584\n \tmov\tr0, r9\n /usr/include/c++/10/ostream:93\n \tadd.w\tr9, sp, #280\t@ 0x118\n /usr/include/c++/10/sstream:584\n \tbl\t15970 , std::allocator >::~basic_stringbuf()@@Base>\n@@ -835679,15 +835679,15 @@\n ./src/mira/contig.C:290\n \tb.w\t1a11a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3374>\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tstr\tr6, [r2, #112]\t@ 0x70\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr4, r4, #4\n+\tlsrs\tr4, r5, #4\n \tmovs\tr5, r4\n \tcbnz\tr4, 1a69a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8b6c>\n \tmovs\tr0, r6\n \tstr\tr0, [r7, #92]\t@ 0x5c\n \tmovs\tr0, r6\n Contig::init():\n ./src/mira/contig.C:186\n@@ -836380,29 +836380,29 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [r4, #84]\t@ 0x54\n \tmovs\tr0, r6\n \tstr\tr6, [r3, #68]\t@ 0x44\n \tmovs\tr0, r6\n-\tldr.w\tr0, [sl, #36]\t@ 0x24\n+\tstr??.w\tr0, [r2, #36]\t@ 0x24\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh.w\tr0, [lr, r4, lsl #2]\n-\tlsls\tr6, r4, #23\n+\tldrh.w\tr0, [r6, r4, lsl #2]\n+\tlsls\tr6, r5, #23\n \tmovs\tr5, r4\n-\tlsls\tr0, r0, #22\n+\tlsls\tr0, r1, #22\n \tmovs\tr5, r4\n-\tlsls\tr2, r0, #16\n+\tlsls\tr2, r1, #16\n \tmovs\tr5, r4\n-\tlsls\tr4, r7, #15\n+\tlsls\tr4, r0, #16\n \tmovs\tr5, r4\n Contig::recalcTemplateIDsAndStrainPresent():\n ./src/mira/contig.C:5998\n \tldr\tr2, [pc, #860]\t@ (1a7230 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93fc>)\n \tldr\tr3, [pc, #864]\t@ (1a7234 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9400>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -836880,27 +836880,27 @@\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldrsh\tr4, [r4, r2]\n \tmovs\tr0, r6\n-\tmovs\tr3, #212\t@ 0xd4\n+\tmovs\tr3, #224\t@ 0xe0\n \tmovs\tr4, r4\n-\tmovs\tr3, #208\t@ 0xd0\n+\tmovs\tr3, #220\t@ 0xdc\n \tmovs\tr4, r4\n-\tsubs\tr2, #16\n+\tsubs\tr2, #24\n \tmovs\tr6, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr6, r7, #1\n+\tlsls\tr6, r0, #2\n \tmovs\tr5, r4\n Contig::getPCRIteratorsAtContigPosition(std::vector >&, int, int) const:\n ./src/mira/contig.C:5110\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/contig.C:5113\n \tsubs\tr7, r2, #0\n ./src/mira/contig.C:5110\n@@ -837432,35 +837432,35 @@\n \tmovs\tr0, r6\n \tldrb\tr0, [r5, r3]\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r4, r7]\n \tmovs\tr0, r6\n-\torrs.w\tr0, r8, #36\t@ 0x24\n+\torn\tr0, r0, #36\t@ 0x24\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcdp2\t0, 15, cr0, cr12, cr4, {1}\n-\tcdp2\t0, 3, cr0, cr6, cr4, {1}\n-\tmovs\tr0, #60\t@ 0x3c\n+\tvhadd.u8\td0, d4, d20\n+\tcdp2\t0, 3, cr0, cr14, cr4, {1}\n+\tmovs\tr0, #72\t@ 0x48\n \tmovs\tr4, r4\n-\tmovs\tr0, #56\t@ 0x38\n+\tmovs\tr0, #68\t@ 0x44\n \tmovs\tr4, r4\n-\tadds\tr6, #120\t@ 0x78\n+\tadds\tr6, #128\t@ 0x80\n \tmovs\tr6, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldc2l\t0, cr0, [lr, #-144]\t@ 0xffffff70\n-\tstc2l\t0, cr0, [r0, #-144]\t@ 0xffffff70\n-\tldc2\t0, cr0, [r2, #144]\t@ 0x90\n-\tstc2l\t0, cr0, [r4], #144\t@ 0x90\n+\tstc2l\t0, cr0, [r6, #-144]!\t@ 0xffffff70\n+\tstc2l\t0, cr0, [r8, #-144]\t@ 0xffffff70\n+\tldc2\t0, cr0, [sl, #144]\t@ 0x90\n+\tstc2l\t0, cr0, [ip], #144\t@ 0x90\n Contig::rcci_t::update():\n ./src/mira/contig.C:6724\n \tldr.w\tr2, [pc, #1924]\t@ 1a7e20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9fec>\n \tldr.w\tr3, [pc, #1924]\t@ 1a7e24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9ff0>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #1920]\t@ 1a7e28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9ff4>\n@@ -838448,35 +838448,35 @@\n \tmovs\tr0, r0\n \tldr\tr6, [r5, r2]\n \tmovs\tr0, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldrsb\tr2, [r7, r3]\n \tmovs\tr0, r6\n-\tsub.w\tr0, r4, r4, asr #32\n+\tsub.w\tr0, ip, r4, asr #32\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr2, r3, r2\n+\tsubs\tr6, r4, r2\n \tmovs\tr4, r4\n-\tsubs\tr6, r2, r2\n+\tsubs\tr2, r4, r2\n \tmovs\tr4, r4\n-\tadds\tr0, #214\t@ 0xd6\n+\tadds\tr0, #222\t@ 0xde\n \tmovs\tr6, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tstmdb\tip, {r2, r5}\n-\tadds\tr2, r2, r5\n+\tldmdb\tr4, {r2, r5}\n+\tadds\tr6, r3, r5\n \tmovs\tr4, r4\n-\tadds\tr6, r1, r5\n+\tadds\tr2, r3, r5\n \tmovs\tr4, r4\n-\tcmp\tr7, #142\t@ 0x8e\n+\tcmp\tr7, #150\t@ 0x96\n \tmovs\tr6, r4\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n Contig::rcci_t::init(std::vector > const*, std::vector > const*, bool, bool, bool):\n ./src/mira/contig.C:6696\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -839455,38 +839455,38 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t1a8798 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa964>\n+\tb.n\t1a87a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa974>\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr4, r4, #1\n+\tasrs\tr0, r6, #1\n \tmovs\tr4, r4\n-\tasrs\tr0, r4, #1\n+\tasrs\tr4, r5, #1\n \tmovs\tr4, r4\n-\tmovs\tr6, #160\t@ 0xa0\n+\tmovs\tr6, #168\t@ 0xa8\n \tmovs\tr6, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [pc, #216]\t@ (1a873c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa908>)\n \tmovs\tr0, r6\n-\tldr\tr2, [sp, #56]\t@ 0x38\n+\tldr\tr2, [sp, #88]\t@ 0x58\n \tmovs\tr7, r4\n-\tldcl\t0, cr0, [r2, #144]\t@ 0x90\n-\tadds\tr7, #106\t@ 0x6a\n+\tldcl\t0, cr0, [sl, #144]\t@ 0x90\n+\tadds\tr7, #114\t@ 0x72\n \tmovs\tr6, r4\n-\tstc\t0, cr0, [r0, #144]!\t@ 0x90\n+\tstc\t0, cr0, [r8, #144]!\t@ 0x90\n ./src/mira/contig.C:6880 (discriminator 1)\n \tadd\tr4, sp, #64\t@ 0x40\n \tmov\tr0, r4\n \tbl\t1a3ad8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ca4>\n /usr/include/c++/10/ostream:611 (discriminator 1)\n \tldr\tr1, [pc, #352]\t@ (1a87e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9ac>)\n \tmovs\tr2, #9\n@@ -839670,19 +839670,19 @@\n \tstr.w\tfp, [sp, #64]\t@ 0x40\n \tstr.w\tr4, [r5, #-208]\n \tb.n\t1a87ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa97a>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t1a8792 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa95e>\n \tb.n\t1a87a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa970>\n \tnop\n+\tstc\t0, cr0, [sl, #-144]!\t@ 0xffffff70\n \tstc\t0, cr0, [r2, #-144]!\t@ 0xffffff70\n-\tldc\t0, cr0, [sl, #-144]\t@ 0xffffff70\n-\tadds\tr6, #102\t@ 0x66\n+\tadds\tr6, #110\t@ 0x6e\n \tmovs\tr6, r4\n-\tldc\t0, cr0, [ip], {36}\t@ 0x24\n+\tstc\t0, cr0, [r4], #144\t@ 0x90\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::ercci_t::advance():\n ./src/mira/contig.C:6892\n \tldr\tr2, [r0, #28]\n@@ -840228,17 +840228,16 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbx\tr8\n \tmovs\tr0, r6\n \tadd\tr6, r4\n \tmovs\tr0, r6\n-\tb.n\t1a8c68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xae34>\n-\tmovs\tr4, r4\n-\tb.n\t1a8c40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xae0c>\n+\t\t\t@ instruction: 0xe8000024\n+\tb.n\t1a8c50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xae1c>\n \tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::setContigCoverageTarget(std::vector >):\n ./src/mira/contig.C:3193\n@@ -840416,18 +840415,18 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr4, r6\n \tmovs\tr0, r6\n \tnegs\tr2, r2\n \tmovs\tr0, r6\n-\tb.n\t1a8be0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xadac>\n-\tmovs\tr4, r4\n \tb.n\t1a8bf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xadbc>\n \tmovs\tr4, r4\n+\tb.n\t1a8c00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xadcc>\n+\tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::getMappedBBStrainIDsFromMask(std::vector >&, unsigned char):\n ./src/mira/contig.C:6674\n \tpush\t{r4, r5, lr}\n@@ -841799,43 +841798,43 @@\n \tmovs\tr0, r6\n \tsubs\tr4, #32\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr3, #38\t@ 0x26\n \tmovs\tr0, r6\n-\tldmia\tr7, {r2, r5, r7}\n+\tldmia\tr7, {r2, r3, r5, r7}\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t1a9750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xb91c>\n+\tb.n\t1a9760 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xb92c>\n \tmovs\tr4, r4\n-\tb.n\t1a973c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xb908>\n+\tb.n\t1a974c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xb918>\n \tmovs\tr4, r4\n-\tldmia\tr7!, {r1, r2, r3, r6}\n+\tldmia\tr7!, {r1, r2, r4, r6}\n \tmovs\tr6, r4\n-\tsvc\t92\t@ 0x5c\n+\tsvc\t100\t@ 0x64\n \tmovs\tr4, r4\n-\tsvc\t164\t@ 0xa4\n+\tsvc\t172\t@ 0xac\n \tmovs\tr4, r4\n-\tsvc\t4\n+\tsvc\t12\n \tmovs\tr4, r4\n-\tudf\t#226\t@ 0xe2\n+\tudf\t#234\t@ 0xea\n \tmovs\tr4, r4\n-\tsvc\t54\t@ 0x36\n+\tsvc\t62\t@ 0x3e\n \tmovs\tr4, r4\n-\tudf\t#254\t@ 0xfe\n+\tsvc\t6\n \tmovs\tr4, r4\n-\tasrs\tr0, r7, #20\n+\tasrs\tr0, r0, #21\n \tmovs\tr6, r4\n-\tudf\t#94\t@ 0x5e\n+\tudf\t#102\t@ 0x66\n \tmovs\tr4, r4\n Contig::getRailsAsReadsAffected(int, std::vector >&, int, int):\n ./src/mira/contig.C:5194\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n \tldr.w\tr2, [pc, #1244]\t@ 1a9c10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbddc>\n \tsub\tsp, #308\t@ 0x134\n@@ -842505,45 +842504,45 @@\n \tmovs\tr0, r0\n \tsubs\tr0, #4\n \tmovs\tr0, r6\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tadds\tr7, #22\n \tmovs\tr0, r6\n-\tldmia\tr3, {r1, r3, r5}\n+\tldmia\tr3!, {r1, r4, r5}\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tblt.n\t1a9b8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd58>\n+\tblt.n\t1a9b9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd68>\n \tmovs\tr4, r4\n-\tblt.n\t1a9b94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd60>\n+\tblt.n\t1a9ba4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd70>\n \tmovs\tr4, r4\n-\tblt.n\t1a9bf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdc0>\n+\tblt.n\t1a9c04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdd0>\n \tmovs\tr4, r4\n-\tblt.n\t1a9ce4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbeb0>\n+\tblt.n\t1a9cf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbec0>\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tblt.n\t1a9d3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf08>\n+\tblt.n\t1a9b4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd18>\n \tmovs\tr4, r4\n-\tblt.n\t1a9b54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd20>\n+\tblt.n\t1a9b64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd30>\n \tmovs\tr4, r4\n-\tadd\tr1, pc, #728\t@ (adr r1, 1a9f2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc0f8>)\n+\tadd\tr1, pc, #760\t@ (adr r1, 1a9f4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc118>)\n \tmovs\tr7, r4\n-\tblt.n\t1a9d2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbef8>\n+\tblt.n\t1a9d3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf08>\n \tmovs\tr4, r4\n-\tblt.n\t1a9d2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbef8>\n+\tblt.n\t1a9d3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf08>\n \tmovs\tr4, r4\n-\tadd\tr7, pc, #952\t@ (adr r7, 1aa018 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1e4>)\n+\tadd\tr7, pc, #984\t@ (adr r7, 1aa038 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc204>)\n \tmovs\tr5, r4\n-\tbge.n\t1a9c6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbe38>\n+\tbge.n\t1a9c7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbe48>\n \tmovs\tr4, r4\n Contig::priv_arw_getReadsAffected(int, int, std::vector >&, int, int):\n ./src/mira/contig.C:3098\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr7, r2\n \tldr\tr2, [pc, #244]\t@ (1a9d60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf2c>)\n \tsub\tsp, #36\t@ 0x24\n@@ -844047,15 +844046,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t1aa210 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc3dc>\n+\tb.n\t1aa220 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc3ec>\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -844525,15 +844524,15 @@\n \tmovs\tr0, r6\n \tmovs\tr5, #236\t@ 0xec\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr4, #96\t@ 0x60\n \tmovs\tr0, r6\n-\tsvc\t72\t@ 0x48\n+\tsvc\t80\t@ 0x50\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -845166,17 +845165,17 @@\n \tmovs\tr0, r6\n \tmovs\tr2, #100\t@ 0x64\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr2, r6, #4\n \tmovs\tr0, r6\n-\tstmia\tr5!, {r1, r4, r7}\n+\tstmia\tr5!, {r1, r3, r4, r7}\n \tmovs\tr4, r4\n-\tstmia\tr5!, {r4, r7}\n+\tstmia\tr5!, {r3, r4, r7}\n \tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::insertMappedReadInContig(AlignedDualSeq const&, unsigned char, unsigned int, int, int, bool):\n ./src/mira/contig.C:3403\n@@ -846646,81 +846645,81 @@\n \tnop\n \tadds\tr6, r7, #7\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr2, r3, #7\n \tmovs\tr0, r6\n-\tstmia\tr4!, {r3, r7}\n+\tstmia\tr4!, {r4, r7}\n \tmovs\tr4, r4\n-\tstmia\tr2!, {r2, r3, r4, r5}\n+\tstmia\tr2!, {r2, r6}\n \tmovs\tr4, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tsubs\tr4, r0, r1\n \tmovs\tr0, r6\n-\tstmia\tr2!, {r3, r4, r5, r6, r7}\n+\tstmia\tr3!, {}\n \tmovs\tr4, r4\n-\tstmia\tr0!, {r3, r6, r7}\n+\tstmia\tr0!, {r4, r6, r7}\n \tmovs\tr4, r4\n-\tstmia\tr2!, {r3, r4}\n+\tstmia\tr2!, {r5}\n \tmovs\tr4, r4\n-\tstmia\tr1!, {r1, r4, r6, r7}\n+\tstmia\tr1!, {r1, r3, r4, r6, r7}\n \tmovs\tr4, r4\n-\titte\tlt\n-\tmovlt\tr4, r4\n-\tstmialt\tr1!, {r2, r4, r5}\n-\tmovge\tr4, r4\n-\tstmia\tr1!, {r1, r3, r5}\n+\tittt\tgt\n+\tmovgt\tr4, r4\n+\tstmiagt\tr1!, {r2, r3, r4, r5}\n+\tmovgt\tr4, r4\n+\tstmia\tr1!, {r1, r4, r5}\n \tmovs\tr4, r4\n-\titee\tne\n+\titte\tne\n \tmovne\tr4, r4\n-\tlsreq\tr0, r7, #2\n+\tlsrne\tr0, r7, #2\n \tmoveq\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r2, r4, r5, r6}\n+\tstmia\tr0!, {r2, r3, r4, r5, r6}\n \tmovs\tr4, r4\n-\tstmia\tr0!, {r1, r3, r6}\n+\tstmia\tr0!, {r1, r4, r6}\n \tmovs\tr4, r4\n-\tbkpt\t0x0034\n+\tbkpt\t0x003c\n \tmovs\tr4, r4\n-\tpop\t{r3, r4, r6, r7, pc}\n+\tpop\t{r5, r6, r7, pc}\n \tmovs\tr4, r4\n-\tpop\t{r1, r4, r6, r7, pc}\n+\tpop\t{r1, r3, r4, r6, r7, pc}\n \tmovs\tr4, r4\n-\tbkpt\t0x0058\n+\tbkpt\t0x0060\n \tmovs\tr4, r4\n-\tpop\t{r1, r4, r5, r6, pc}\n+\tpop\t{r1, r3, r4, r5, r6, pc}\n \tmovs\tr4, r4\n-\tbkpt\t0x00f0\n+\tbkpt\t0x00f8\n \tmovs\tr4, r4\n-\tpop\t{r1, r4, pc}\n+\tpop\t{r1, r3, r4, pc}\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbkpt\t0x004c\n+\tbkpt\t0x0054\n \tmovs\tr4, r4\n-\tbkpt\t0x0040\n+\tbkpt\t0x0048\n \tmovs\tr4, r4\n-\tadd\tr3, sp, #424\t@ 0x1a8\n+\tadd\tr3, sp, #472\t@ 0x1d8\n \tmovs\tr3, r4\n-\tbkpt\t0x0004\n+\tbkpt\t0x000c\n \tmovs\tr4, r4\n-\tpop\t{r1, r3, r4, r5}\n+\tpop\t{r1, r6}\n \tmovs\tr4, r4\n-\tpop\t{r1, r3, r4, r6, r7}\n+\tpop\t{r1, r5, r6, r7}\n \tmovs\tr4, r4\n-\tcbnz\tr4, 1abd2e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdefa>\n+\tcbnz\tr4, 1abd30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdefc>\n \tmovs\tr4, r4\n-\tcbnz\tr0, 1abd38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf04>\n+\tcbnz\tr0, 1abd3a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf06>\n \tmovs\tr4, r4\n-\tpop\t{r2, r4}\n+\tpop\t{r2, r3, r4}\n \tmovs\tr4, r4\n Contig::updateCountVectors(int, int, __gnu_cxx::__normal_iterator > >, unsigned int, bool, int):\n ./src/mira/contig.C:4271\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r3\n \tldr.w\tr5, [pc, #1908]\t@ 1ac440 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe60c>\n \tldr.w\tr4, [pc, #1908]\t@ 1ac444 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe610>\n@@ -847715,54 +847714,54 @@\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr2, r0, #10\n \tmovs\tr0, r6\n \tasrs\tr2, r7, #2\n \tmovs\tr0, r6\n-\tldmia\tr2, {r1, r2, r4, r6}\n+\tldmia\tr2, {r1, r2, r3, r4, r6}\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr2, r0, #3\n+\tadds\tr6, r1, #3\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xe8ca0025\n-\t\t\t@ instruction: 0xb764\n+\t\t\t@ instruction: 0xe8d20025\n+\t\t\t@ instruction: 0xb76c\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb82c\n+\t\t\t@ instruction: 0xb834\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb6d2\n+\t\t\t@ instruction: 0xb6da\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb7b8\n+\t\t\t@ instruction: 0xb7c0\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb7b6\n+\t\t\t@ instruction: 0xb7be\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb7a4\n+\t\t\t@ instruction: 0xb7ac\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb798\n+\t\t\t@ instruction: 0xb7a0\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb636\n+\t\t\t@ instruction: 0xb63e\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb694\n+\t\t\t@ instruction: 0xb69c\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb68e\n+\t\t\t@ instruction: 0xb696\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb67e\n+\t\t\t@ instruction: 0xb686\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xb66e\n+\tcpsid\tai\n \tmovs\tr4, r4\n-\tcpsie\ta\n+\t\t\t@ instruction: 0xb66c\n \tmovs\tr4, r4\n-\tpush\t{r1, r3, r4, r6, lr}\n+\tpush\t{r1, r5, r6, lr}\n \tmovs\tr4, r4\n Contig::priv_rebuildConCounts():\n ./src/mira/contig.C:5390\n \tldr.w\tr2, [pc, #2092]\t@ 1accd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xeea0>\n \tldr.w\tr3, [pc, #2092]\t@ 1accd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xeea4>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -848875,35 +848874,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r4, r5, r6}\n+\tstmia\tr3!, {r1, r3, r4, r5, r6}\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsls\tr2, r6, #20\n \tmovs\tr0, r6\n-\tldr\tr1, [sp, #904]\t@ 0x388\n+\tldr\tr1, [sp, #936]\t@ 0x3a8\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r1, r3, r7}\n+\tstmia\tr0!, {r1, r4, r7}\n \tmovs\tr4, r4\n-\tldmia\tr1!, {r2, r3, r5, r6}\n+\tldmia\tr1!, {r3, r4, r5, r6}\n \tmovs\tr3, r4\n-\tldmia\tr1!, {r3, r5, r6}\n+\tldmia\tr1!, {r2, r4, r5, r6}\n \tmovs\tr3, r4\n-\tsvc\t168\t@ 0xa8\n+\tsvc\t176\t@ 0xb0\n \tmovs\tr5, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n Contig::adjustReadOffsets(int, int):\n ./src/mira/contig.C:5352\n \tpush\t{r4, r5, r6, r7, lr}\n \tldr\tr4, [pc, #500]\t@ (1acf20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf0ec>)\n@@ -849150,17 +849149,17 @@\n \tmovs\tr0, r0\n \tlsls\tr4, r5, #8\n \tmovs\tr0, r6\n \tlsls\tr2, r2, #8\n \tmovs\tr0, r6\n \tlsls\tr0, r7, #3\n \tmovs\tr0, r6\n-\tadd\tr3, sp, #776\t@ 0x308\n+\tadd\tr3, sp, #808\t@ 0x328\n \tmovs\tr4, r4\n-\tadd\tr3, sp, #688\t@ 0x2b0\n+\tadd\tr3, sp, #720\t@ 0x2d0\n \tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::removeRails():\n ./src/mira/contig.C:6303\n@@ -849681,46 +849680,46 @@\n \tmovs\tr0, r2\n \tmovs\tr0, r6\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvrev64.32\td16, d31\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #248]\t@ 0xf8\n+\tstr\tr4, [sp, #280]\t@ 0x118\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tcdp2\t0, 11, cr0, cr0, cr15, {1}\n-\tstmia\tr4!, {r5}\n+\tstmia\tr4!, {r2, r3, r5}\n \tmovs\tr3, r4\n-\tstmia\tr4!, {r2, r3, r4}\n+\tstmia\tr4!, {r3, r5}\n \tmovs\tr3, r4\n-\tbge.n\t1ad430 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5fc>\n+\tbge.n\t1ad440 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf60c>\n \tmovs\tr5, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r2, r3, r4}\n+\tstmia\tr3!, {r3, r5}\n \tmovs\tr3, r4\n-\tstmia\tr3!, {r4}\n+\tstmia\tr3!, {r2, r3, r4}\n \tmovs\tr3, r4\n-\t\t\t@ instruction: 0xeae00025\n+\t\t\t@ instruction: 0xeae80025\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n Contig::stripToBackbone():\n ./src/mira/contig.C:6329\n \tldr.w\tr2, [pc, #1884]\t@ 1adb00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfccc>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n@@ -850699,50 +850698,50 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \t\t\t@ instruction: 0xfbb2002f\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xfb8c002f\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrh\tr6, [r2, #62]\t@ 0x3e\n+\tldrh\tr6, [r3, #62]\t@ 0x3e\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #464\t@ (adr r4, 1adcf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfec0>)\n+\tadd\tr4, pc, #496\t@ (adr r4, 1add14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfee0>)\n \tmovs\tr4, r4\n-\tadd\tr4, pc, #488\t@ (adr r4, 1add10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfedc>)\n+\tadd\tr4, pc, #520\t@ (adr r4, 1add30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfefc>)\n \tmovs\tr4, r4\n-\tadd\tr4, pc, #600\t@ (adr r4, 1add84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff50>)\n+\tadd\tr4, pc, #632\t@ (adr r4, 1adda4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff70>)\n \tmovs\tr4, r4\n-\tadd\tr4, pc, #736\t@ (adr r4, 1ade10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xffdc>)\n+\tadd\tr4, pc, #768\t@ (adr r4, 1ade30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfffc>)\n \tmovs\tr4, r4\n-\tcbz\tr0, 1adbac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd78>\n+\tcbz\tr0, 1adbae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd7a>\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n-\tpop\t{r3, r4, r5, r6, r7}\n+\tpop\t{r2, pc}\n \tmovs\tr3, r4\n-\tpop\t{r2, r4, r5, r6, r7}\n+\tpop\t{pc}\n \tmovs\tr3, r4\n-\tbcc.n\t1adbac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd78>\n+\tbcc.n\t1adbbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd88>\n \tmovs\tr5, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldrh\tr4, [r1, #26]\n+\tldrh\tr4, [r2, #26]\n \tmovs\tr4, r4\n \t\t\t@ instruction: 0xf612002f\n-\tcbnz\tr4, 1adbb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd80>\n-\tmovs\tr3, r4\n \tcbnz\tr0, 1adbb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd84>\n \tmovs\tr3, r4\n-\tbne.n\t1adadc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfca8>\n+\tcbnz\tr4, 1adbba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd86>\n+\tmovs\tr3, r4\n+\tbne.n\t1adaec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcb8>\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n Contig::updateBaseLocks(PlacedContigReads::const_iterator, bool):\n ./src/mira/contig.C:4184\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n@@ -851664,32 +851663,32 @@\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf3e0002f\n \tlsrs\tr0, r6, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #9\n \tmovs\tr0, r0\n-\tstrh\tr0, [r2, #50]\t@ 0x32\n+\tstrh\tr0, [r3, #50]\t@ 0x32\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tpush\t{r1, r3, r5, r6, lr}\n+\tpush\t{r1, r2, r4, r5, r6, lr}\n \tmovs\tr3, r4\n-\tpush\t{r1, r2, r5, r6, lr}\n+\tpush\t{r1, r4, r5, r6, lr}\n \tmovs\tr3, r4\n-\tldmia\tr3!, {r1, r2, r5, r7}\n+\tldmia\tr3, {r1, r2, r3, r5, r7}\n \tmovs\tr5, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tvhadd.s8\td16, d4, d31\n-\tstrh\tr2, [r5, #28]\n+\tstrh\tr2, [r6, #28]\n \tmovs\tr4, r4\n Contig::initialiseBaseLocks():\n ./src/mira/contig.C:4159\n \tldr\tr2, [pc, #840]\t@ (1ae5d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x107a4>)\n \tldr\tr3, [pc, #844]\t@ (1ae5dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x107a8>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -852148,15 +852147,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #432\t@ (adr r6, 1ae7b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1097c>)\n+\tadd\tr6, pc, #464\t@ (adr r6, 1ae7d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1099c>)\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -852677,15 +852676,15 @@\n \t...\n \tstrd\tr0, r0, [r0, #-188]\t@ 0xbc\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmdb\tsl!, {r0, r1, r2, r3, r5}\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #368]\t@ 0x170\n+\tstr\tr4, [sp, #400]\t@ 0x190\n \tmovs\tr4, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n@@ -854383,31 +854382,31 @@\n \tnop\n \tadds\tr7, #10\n \tmovs\tr0, r6\n \tb.n\t1afac0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11c8c>\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #656]\t@ 0x290\n+\tldr\tr5, [sp, #688]\t@ 0x2b0\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #416\t@ (adr r4, 1af830 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x119fc>)\n+\tadd\tr4, pc, #464\t@ (adr r4, 1af860 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11a2c>)\n \tmovs\tr3, r4\n-\tadd\tr4, pc, #352\t@ (adr r4, 1af7f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x119c0>)\n+\tadd\tr4, pc, #400\t@ (adr r4, 1af824 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x119f0>)\n \tmovs\tr3, r4\n-\tldmia\tr4!, {r2, r5}\n+\tldmia\tr4!, {r2, r3, r5}\n \tmovs\tr5, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tstrb\tr0, [r2, #1]\n+\tstrb\tr0, [r3, #1]\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/hdeque.H:136\n \tadd\tr4, sp, #640\t@ 0x280\n \tmov\tr0, r4\n \tbl\t1a3ad8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ca4>\n@@ -855231,39 +855230,39 @@\n \tmov\tr0, r7\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t1afbd6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11da2>\n \tb.n\t1afcea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11eb6>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t1afbe4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11db0>\n \tb.n\t1afbf6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11dc2>\n-\tstr\tr4, [sp, #656]\t@ 0x290\n+\tstr\tr4, [sp, #688]\t@ 0x2b0\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrh\tr0, [r5, #32]\n+\tstrh\tr0, [r6, #32]\n \tmovs\tr4, r4\n-\tstrh\tr6, [r7, #28]\n+\tstrh\tr6, [r0, #30]\n \tmovs\tr4, r4\n-\tstrh\tr6, [r2, #26]\n+\tstrh\tr6, [r3, #26]\n \tmovs\tr4, r4\n-\tstr\tr3, [sp, #56]\t@ 0x38\n+\tstr\tr3, [sp, #88]\t@ 0x58\n \tmovs\tr4, r4\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tstrh\tr4, [r5, #8]\n+\tstrh\tr4, [r6, #8]\n \tmovs\tr4, r4\n-\tstrh\tr4, [r4, #8]\n+\tstrh\tr4, [r5, #8]\n \tmovs\tr4, r4\n-\tstrh\tr2, [r0, #6]\n+\tstrh\tr2, [r1, #6]\n \tmovs\tr4, r4\n-\tstmdb\tr4!, {r0, r1, r5}\n+\tldmdb\tr0!, {r0, r1, r5}\n std::vector, std::allocator >, std::allocator, std::allocator > > >::operator=(std::vector, std::allocator >, std::allocator, std::allocator > > > const&) [clone .isra.0]:\n /usr/include/c++/10/bits/vector.tcc:198\n \tldr.w\tr2, [pc, #1704]\t@ 1b03d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x125a4>\n /usr/include/c++/10/bits/vector.tcc:201\n \tcmp\tr1, r0\n /usr/include/c++/10/bits/vector.tcc:198\n \tldr.w\tr3, [pc, #1704]\t@ 1b03dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x125a8>\n@@ -857400,53 +857399,53 @@\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldmia\tr3!, {r1, r6}\n \tmovs\tr7, r5\n-\tstr\tr0, [sp, #384]\t@ 0x180\n+\tstr\tr0, [sp, #432]\t@ 0x1b0\n \tmovs\tr3, r4\n-\tstr\tr0, [sp, #328]\t@ 0x148\n+\tstr\tr0, [sp, #376]\t@ 0x178\n \tmovs\tr3, r4\n-\t\t\t@ instruction: 0xb820\n+\t\t\t@ instruction: 0xb828\n \tmovs\tr5, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tsubs\tr4, r2, r2\n \tmovs\tr0, r6\n \tstmia\tr6!, {r6, r7}\n \tmovs\tr7, r5\n-\tstrb\tr0, [r4, #10]\n+\tstrb\tr0, [r5, #10]\n \tmovs\tr4, r4\n \tadds\tr0, r2, r1\n \tmovs\tr0, r6\n-\tstrb\tr4, [r0, #6]\n+\tstrb\tr4, [r1, #6]\n \tmovs\tr4, r4\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n-\tstrb\tr6, [r7, #1]\n+\tstrb\tr6, [r0, #2]\n \tmovs\tr4, r4\n-\tstrb\tr4, [r5, #1]\n+\tstrb\tr4, [r6, #1]\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r3, #0]\n+\tstrb\tr4, [r4, #0]\n \tmovs\tr4, r4\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_deque.h:356\n \tldr.w\tr4, [r9, #20]\n \tldr.w\tip, [r9, #36]\t@ 0x24\n \tldr.w\tr0, [r9, #28]\n@@ -858654,47 +858653,47 @@\n \tb.n\t1b1594 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x13760>\n \tb.n\t1b1728 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x138f4>\n \tb.n\t1b15d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1379c>\n \tb.n\t1b16ce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1389a>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [r5, #20]\n+\tldr\tr6, [r6, #20]\n \tmovs\tr4, r4\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tstr\tr0, [r5, #104]\t@ 0x68\n-\tmovs\tr4, r4\n \tstr\tr0, [r6, #104]\t@ 0x68\n \tmovs\tr4, r4\n-\tstr\tr0, [r5, #104]\t@ 0x68\n+\tstr\tr0, [r7, #104]\t@ 0x68\n \tmovs\tr4, r4\n-\tstr\tr4, [r7, #104]\t@ 0x68\n+\tstr\tr0, [r6, #104]\t@ 0x68\n+\tmovs\tr4, r4\n+\tstr\tr4, [r0, #108]\t@ 0x6c\n \tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr6!, {r1, r2, r3, r5, r7}\n+\tldmia\tr6!, {r1, r3, r4, r5, r7}\n \tmovs\tr3, r4\n-\tstr\tr6, [r3, #100]\t@ 0x64\n+\tstr\tr6, [r4, #100]\t@ 0x64\n \tmovs\tr4, r4\n-\tstr\tr4, [r7, #100]\t@ 0x64\n+\tstr\tr4, [r0, #104]\t@ 0x68\n \tmovs\tr4, r4\n-\tstr\tr6, [r5, #100]\t@ 0x64\n+\tstr\tr6, [r6, #100]\t@ 0x64\n \tmovs\tr4, r4\n-\tstr\tr2, [r4, #100]\t@ 0x64\n+\tstr\tr2, [r5, #100]\t@ 0x64\n \tmovs\tr4, r4\n-\tstr\tr6, [r2, #100]\t@ 0x64\n+\tstr\tr6, [r3, #100]\t@ 0x64\n \tmovs\tr4, r4\n-\tadd\tr4, pc, #360\t@ (adr r4, 1b18e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x13aac>)\n+\tadd\tr4, pc, #392\t@ (adr r4, 1b1900 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x13acc>)\n \tmovs\tr5, r4\n-\tstr\tr2, [r5, #96]\t@ 0x60\n+\tstr\tr2, [r6, #96]\t@ 0x60\n \tmovs\tr4, r4\n-\tstr\tr2, [r5, #84]\t@ 0x54\n+\tstr\tr2, [r6, #84]\t@ 0x54\n \tmovs\tr4, r4\n Contig::addRails(unsigned int, unsigned int, std::__cxx11::basic_string, std::allocator > const&, bool, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/contig.C:6071\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr\tr5, [pc, #384]\t@ (1b1908 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x13ad4>)\n \tldr\tr0, [pc, #384]\t@ (1b190c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x13ad8>)\n@@ -858929,17 +858928,17 @@\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xb7b8\n \tmovs\tr7, r5\n \t\t\t@ instruction: 0xb722\n \tmovs\tr7, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [r4, #68]\t@ 0x44\n+\tstr\tr6, [r5, #68]\t@ 0x44\n \tmovs\tr4, r4\n-\tstr\tr0, [r5, #68]\t@ 0x44\n+\tstr\tr0, [r6, #68]\t@ 0x44\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::vector >, std::allocator > > >::operator=(std::vector >, std::allocator > > > const&) [clone .isra.0]:\n /usr/include/c++/10/bits/vector.tcc:201\n \tcmp\tr1, r0\n \tbeq.w\t1b1b60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x13d2c>\n@@ -861222,17 +861221,17 @@\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr6, [r3, r0]\n+\tldrb\tr6, [r4, r0]\n \tmovs\tr4, r4\n-\tldrb\tr0, [r0, r3]\n+\tldrb\tr0, [r1, r3]\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #11\n \tmovs\tr0, r0\n \tadd\tr1, sp, #808\t@ 0x328\n \tmovs\tr7, r5\n@@ -861429,19 +861428,19 @@\n \tcmp\tr4, #0\n \tbne.n\t1b2a92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14c5e>\n \tb.n\t1b29ee , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bba>\n /usr/include/c++/10/bits/stl_bvector.h:549\n \tb.n\t1b2a10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bdc>\n \tb.n\t1b2a16 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14be2>\n \tnop\n-\tstrh\tr2, [r0, r6]\n+\tstrh\tr2, [r1, r6]\n \tmovs\tr4, r4\n-\tstrh\tr0, [r6, r5]\n+\tstrh\tr0, [r7, r5]\n \tmovs\tr4, r4\n-\tstrh\tr6, [r7, r6]\n+\tstrh\tr6, [r0, r7]\n \tmovs\tr4, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n Contig::discard():\n ./src/mira/contig.C:207\n@@ -865627,25 +865626,25 @@\n \tmovs\tr0, r0\n \tldrh\tr2, [r0, #56]\t@ 0x38\n \tmovs\tr7, r5\n \tldrh\tr2, [r7, #52]\t@ 0x34\n \tmovs\tr7, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tsubs\tr3, #36\t@ 0x24\n+\tsubs\tr3, #44\t@ 0x2c\n \tmovs\tr4, r4\n-\tsubs\tr2, #32\n+\tsubs\tr2, #40\t@ 0x28\n \tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr0, [pc, #32]\t@ (1b4c74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e40>)\n+\tldr\tr0, [pc, #64]\t@ (1b4c94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e60>)\n \tmovs\tr4, r4\n-\tmov\tr0, r4\n+\tmov\tr0, r5\n \tmovs\tr4, r4\n ./src/mira/contig.C:4023\n \tvmov\tr0, s16\n \tbl\t3c92ac , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6d14>\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr.w\tr2, [r9, #976]\t@ 0x3d0\n ./src/mira/contig.C:4023\n@@ -866783,59 +866782,59 @@\n \tnop\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tstrh\tr6, [r0, #12]\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tsubs\tr5, #234\t@ 0xea\n+\tsubs\tr5, #242\t@ 0xf2\n \tmovs\tr4, r4\n-\tcmp\tr7, #240\t@ 0xf0\n+\tcmp\tr7, #248\t@ 0xf8\n \tmovs\tr4, r4\n-\tcmp\tr6, #196\t@ 0xc4\n+\tcmp\tr6, #204\t@ 0xcc\n \tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr7, #172\t@ 0xac\n+\tcmp\tr7, #180\t@ 0xb4\n \tmovs\tr4, r4\n-\tcmp\tr7, #166\t@ 0xa6\n+\tcmp\tr7, #174\t@ 0xae\n \tmovs\tr4, r4\n-\tstmia\tr0!, {r1, r2, r3, r4, r5, r6, r7}\n+\tstmia\tr1!, {r1, r2}\n \tmovs\tr6, r4\n-\tcmp\tr6, #50\t@ 0x32\n+\tcmp\tr6, #58\t@ 0x3a\n \tmovs\tr4, r4\n-\tcmp\tr5, #154\t@ 0x9a\n+\tcmp\tr5, #162\t@ 0xa2\n \tmovs\tr4, r4\n-\tcmp\tr5, #138\t@ 0x8a\n+\tcmp\tr5, #146\t@ 0x92\n \tmovs\tr4, r4\n-\tcmp\tr5, #222\t@ 0xde\n+\tcmp\tr5, #230\t@ 0xe6\n \tmovs\tr4, r4\n-\tcmp\tr5, #26\n+\tcmp\tr5, #34\t@ 0x22\n \tmovs\tr4, r4\n-\tcmp\tr5, #148\t@ 0x94\n+\tcmp\tr5, #156\t@ 0x9c\n \tmovs\tr4, r4\n-\tcmp\tr4, #180\t@ 0xb4\n+\tcmp\tr4, #188\t@ 0xbc\n \tmovs\tr4, r4\n-\tcmp\tr5, #102\t@ 0x66\n+\tcmp\tr5, #110\t@ 0x6e\n \tmovs\tr4, r4\n-\tcmp\tr4, #78\t@ 0x4e\n+\tcmp\tr4, #86\t@ 0x56\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr4, #116\t@ 0x74\n+\tmovs\tr4, #124\t@ 0x7c\n \tmovs\tr4, r4\n-\tmovs\tr4, #104\t@ 0x68\n+\tmovs\tr4, #112\t@ 0x70\n \tmovs\tr4, r4\n-\tasrs\tr4, r2, #6\n+\tasrs\tr0, r4, #6\n \tmovs\tr3, r4\n-\tmovs\tr4, #48\t@ 0x30\n+\tmovs\tr4, #56\t@ 0x38\n \tmovs\tr4, r4\n-\tcmp\tr1, #94\t@ 0x5e\n+\tcmp\tr1, #102\t@ 0x66\n \tmovs\tr4, r4\n Contig::addFirstRead(int, signed char):\n ./src/mira/contig.C:1028\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr3, [pc, #2180]\t@ 1b5e28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17ff4>\n \tvpush\t{d8}\n \tsub\tsp, #292\t@ 0x124\n@@ -867923,43 +867922,43 @@\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr0, [r5, #6]\n \tmovs\tr7, r5\n \tldrb\tr6, [r4, #6]\n \tmovs\tr7, r5\n-\tadds\tr6, #34\t@ 0x22\n+\tadds\tr6, #42\t@ 0x2a\n \tmovs\tr4, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tstrb\tr4, [r6, #27]\n \tmovs\tr7, r5\n \tstrb\tr6, [r7, #16]\n \tmovs\tr7, r5\n-\tmovs\tr2, #68\t@ 0x44\n+\tmovs\tr2, #76\t@ 0x4c\n \tmovs\tr4, r4\n-\tmovs\tr2, #86\t@ 0x56\n+\tmovs\tr2, #94\t@ 0x5e\n \tmovs\tr4, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr6, #106\t@ 0x6a\n+\tcmp\tr6, #114\t@ 0x72\n \tmovs\tr4, r4\n-\tcmp\tr6, #88\t@ 0x58\n+\tcmp\tr6, #96\t@ 0x60\n \tmovs\tr4, r4\n-\tmovs\tr2, #10\n+\tmovs\tr2, #18\n \tmovs\tr4, r4\n-\tmovs\tr1, #168\t@ 0xa8\n+\tmovs\tr1, #176\t@ 0xb0\n \tmovs\tr4, r4\n void std::__cxx11::list >, std::allocator > > >::_M_assign_dispatch > > >(std::_List_const_iterator > >, std::_List_const_iterator > >, std::__false_type) [clone .isra.0]:\n /usr/include/c++/10/bits/list.tcc:308\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr4, [pc, #1864]\t@ 1b65c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1878c>\n \tvpush\t{d8}\n \tsub\tsp, #148\t@ 0x94\n@@ -872343,15 +872342,15 @@\n \tmovs\tr7, r5\n \tstrh\tr6, [r3, r6]\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr4, [r0, r2]\n \tmovs\tr7, r5\n-\tlsrs\tr6, r4, #12\n+\tlsrs\tr6, r5, #12\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -873059,26 +873058,26 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldr\tr3, [pc, #192]\t@ (1b8778 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a944>)\n \tmovs\tr7, r5\n-\t\t\t@ instruction: 0xfb640023\n-\tsmlatb\tr0, r6, r3, r0\n+\t\t\t@ instruction: 0xfb6c0023\n+\tsmlatb\tr0, lr, r3, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfb0e0023\n-\t\t\t@ instruction: 0xfaa80023\n-\t\t\t@ instruction: 0xfa180023\n-\t\t\t@ instruction: 0xfa060023\n+\tsmlatb\tr0, r6, r3, r0\n+\t\t\t@ instruction: 0xfab00023\n \t\t\t@ instruction: 0xfa200023\n-\tvld1.8\t{d0[1]}, [r6], r3\n+\t\t\t@ instruction: 0xfa0e0023\n+\t\t\t@ instruction: 0xfa280023\n+\tvld1.8\t{d0[1]}, [lr], r3\n Contig::addRead_wrapped(std::vector >&, AlignedDualSeqFacts const*, int, int, int, bool, int, Contig::templateguessinfo_t&, Contig::errorstatus_t&):\n ./src/mira/contig.C:1227\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tvpush\t{d8-d10}\n \tsub.w\tsp, sp, #636\t@ 0x27c\n \tadd\tr5, sp, #124\t@ 0x7c\n@@ -874711,28 +874710,28 @@\n \tmovs\tr7, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n-\teors.w\tr0, ip, #10682368\t@ 0xa30000\n-\t\t\t@ instruction: 0xf3920023\n+\t\t\t@ instruction: 0xf4a40023\n+\t\t\t@ instruction: 0xf39a0023\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf5880023\n-\t\t\t@ instruction: 0xf3160023\n+\t\t\t@ instruction: 0xf5900023\n+\t\t\t@ instruction: 0xf31e0023\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf4a60023\n-\torns\tr0, r0, #10682368\t@ 0xa30000\n-\teor.w\tr0, lr, #10682368\t@ 0xa30000\n-\t\t\t@ instruction: 0xf26c0023\n+\t\t\t@ instruction: 0xf4ae0023\n+\torns\tr0, r8, #10682368\t@ 0xa30000\n+\teors.w\tr0, r6, #10682368\t@ 0xa30000\n+\t\t\t@ instruction: 0xf2740023\n ./src/mira/../../src/mira/readpool.H:216\n \tldr\tr0, [r4, #64]\t@ 0x40\n \tmov\tr1, r9\n \tbl\t299f8 \n ./src/mira/contig.C:1945\n \tldr\tr6, [sp, #100]\t@ 0x64\n ./src/mira/../../src/mira/pcrcontainer.H:172\n@@ -876458,55 +876457,55 @@\n \tcmp\tr7, #0\n \tbne.w\t1b90b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b27c>\n \tb.w\t1b9606 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b7d2>\n \tsubs\tr3, #86\t@ 0x56\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcdp\t0, 13, cr0, cr12, cr3, {1}\n-\tbkpt\t0x00c4\n+\tcdp\t0, 14, cr0, cr4, cr3, {1}\n+\tbkpt\t0x00cc\n \tmovs\tr5, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tcdp\t0, 8, cr0, cr0, cr3, {1}\n-\tsub.w\tr0, r4, r3, asr #32\n+\tcdp\t0, 8, cr0, cr8, cr3, {1}\n+\tsub.w\tr0, ip, r3, asr #32\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t1b9aa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc74>\n+\tb.n\t1b9ab8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc84>\n \tmovs\tr3, r4\n-\tb.n\t1b9aac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc78>\n+\tb.n\t1b9abc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc88>\n \tmovs\tr3, r4\n-\tb.n\t1b9ab4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc80>\n+\tb.n\t1b9ac4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc90>\n \tmovs\tr3, r4\n-\tble.n\t1b9ff8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1c4>\n+\tble.n\t1ba008 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1d4>\n \tmovs\tr3, r4\n-\tb.n\t1ba878 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ca44>\n+\tb.n\t1ba888 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ca54>\n \tmovs\tr3, r4\n-\tb.n\t1b9a9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc68>\n+\tb.n\t1b9aac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc78>\n \tmovs\tr3, r4\n-\tb.n\t1b9acc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc98>\n+\tb.n\t1b9adc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bca8>\n \tmovs\tr3, r4\n-\tldr??.w\tr0, [r6, r4, lsl #2]\n-\tb.n\t1ba75c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c928>\n+\tldr??.w\tr0, [lr, r4, lsl #2]\n+\tb.n\t1ba76c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c938>\n \tmovs\tr3, r4\n-\tb.n\t1b9a24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bbf0>\n+\tb.n\t1b9a34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bc00>\n \tmovs\tr3, r4\n-\tb.n\t1ba698 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c864>\n+\tb.n\t1ba6a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c874>\n \tmovs\tr3, r4\n-\tb.n\t1ba894 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ca60>\n+\tb.n\t1ba8a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ca70>\n \tmovs\tr3, r4\n-\tb.n\t1b9970 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bb3c>\n+\tb.n\t1b9980 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bb4c>\n \tmovs\tr3, r4\n-\tb.n\t1b995c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bb28>\n+\tb.n\t1b996c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bb38>\n \tmovs\tr3, r4\n-\tb.n\t1b9948 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bb14>\n+\tb.n\t1b9958 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bb24>\n \tmovs\tr3, r4\n /usr/include/c++/10/bits/stl_vector.h:1064\n \tldr\tr6, [r5, #4]\n \tldr\tr7, [r5, #8]\n \tldr\tr1, [r5, #0]\n ./src/mira/../../src/mira/pcrcontainer.H:172\n \tldr\tr3, [r6, #12]\n@@ -878263,81 +878262,81 @@\n \tldr\tr1, [r1, r7]\n \tblx\tb700 <__cxa_throw@plt>\n ./src/mira/contig.C:1816 (discriminator 21)\n \tmov\tr0, r6\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n \tb.n\t1babaa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd76>\n \tb.n\t1bae56 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d022>\n-\tb.n\t1bb1c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d38c>\n+\tb.n\t1bb1d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d39c>\n \tmovs\tr3, r4\n-\tb.n\t1bb1b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d384>\n+\tb.n\t1bb1c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d394>\n \tmovs\tr3, r4\n-\tudf\t#154\t@ 0x9a\n+\tudf\t#162\t@ 0xa2\n \tmovs\tr3, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbvc.n\t1badf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfc4>\n+\tbvc.n\t1bae08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfd4>\n \tmovs\tr3, r4\n-\tble.n\t1bae70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d03c>\n+\tudf\t#2\n \tmovs\tr3, r4\n-\tstmia\tr7!, {r3, r4}\n+\tstmia\tr7!, {r2, r5}\n \tmovs\tr2, r4\n-\tstmia\tr7!, {r2, r4}\n+\tstmia\tr7!, {r5}\n \tmovs\tr2, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbvc.n\t1baef8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d0c4>\n+\tbvc.n\t1baf08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d0d4>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d110>\n+\tbhi.n\t1baf54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d120>\n \tmovs\tr3, r4\n-\tbpl.n\t1bae18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfe4>\n+\tbpl.n\t1bae28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cff4>\n \tmovs\tr3, r4\n-\tbvs.n\t1badb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cf7c>\n+\tbvs.n\t1badc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cf8c>\n \tmovs\tr3, r4\n-\tbvs.n\t1baf84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d150>\n+\tbvs.n\t1baf94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d160>\n \tmovs\tr3, r4\n-\tbpl.n\t1baf10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d0dc>\n-\tmovs\tr3, r4\n-\tbhi.n\t1baf5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d128>\n+\tbpl.n\t1baf20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d0ec>\n \tmovs\tr3, r4\n \tbhi.n\t1baf6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d138>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d124>\n+\tbhi.n\t1baf7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d148>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d124>\n+\tbhi.n\t1baf68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d134>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d118>\n+\tbhi.n\t1baf68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d134>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d114>\n+\tbhi.n\t1baf5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d128>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d148>\n+\tbhi.n\t1baf58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d124>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d144>\n+\tbhi.n\t1baf8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d158>\n \tmovs\tr3, r4\n-\tbvs.n\t1bae34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d000>\n+\tbhi.n\t1baf88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d154>\n \tmovs\tr3, r4\n-\tbvs.n\t1bae4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d018>\n+\tbvs.n\t1bae44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d010>\n \tmovs\tr3, r4\n-\tadds\tr0, #64\t@ 0x40\n+\tbvs.n\t1bae5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d028>\n+\tmovs\tr3, r4\n+\tadds\tr0, #72\t@ 0x48\n \tmovs\tr4, r4\n-\tbvs.n\t1bae2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cff8>\n+\tbvs.n\t1bae3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d008>\n \tmovs\tr3, r4\n-\tbvs.n\t1bae10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfdc>\n+\tbvs.n\t1bae20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfec>\n \tmovs\tr3, r4\n-\tbhi.n\t1baf3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d108>\n+\tbhi.n\t1baf4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d118>\n \tmovs\tr3, r4\n-\tbvs.n\t1badf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfc4>\n+\tbvs.n\t1bae08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfd4>\n \tmovs\tr3, r4\n-\tbvs.n\t1badec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfb8>\n+\tbvs.n\t1badfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfc8>\n \tmovs\tr3, r4\n-\tbvs.n\t1bafe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d1ac>\n+\tbvs.n\t1badf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cfbc>\n \tmovs\tr3, r4\n ./src/mira/contig.C:2352\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n ./src/mira/contig.C:2336\n \tmov\tr0, r6\n \tbl\t3e4670 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x220d8>\n@@ -879093,29 +879092,29 @@\n \tmovs\tr7, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tadds\tr0, r0, #3\n \tmovs\tr7, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbcc.n\t1bb488 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d654>\n+\tbmi.n\t1bb498 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d664>\n \tmovs\tr3, r4\n \tadd\tr2, sp, #816\t@ 0x330\n \tmovs\tr2, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tbne.n\t1bb56c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d738>\n+\tbne.n\t1bb57c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d748>\n \tmovs\tr3, r4\n-\tbne.n\t1bb55c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d728>\n+\tbne.n\t1bb56c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d738>\n \tmovs\tr3, r4\n-\tbne.n\t1bb484 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d650>\n+\tbne.n\t1bb494 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d660>\n \tmovs\tr3, r4\n Contig::trimMapOverhang():\n ./src/mira/contig.C:4665\n \tldr.w\tr2, [pc, #2216]\t@ 1bbd5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1df28>\n \tldr.w\tr3, [pc, #2216]\t@ 1bbd60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1df2c>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -880266,39 +880265,39 @@\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr2, r3, r2\n \tmovs\tr7, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #368\t@ 0x170\n+\tadd\tr6, sp, #400\t@ 0x190\n \tmovs\tr3, r4\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tadds\tr6, r5, r1\n \tmovs\tr7, r5\n \tasrs\tr6, r0, #15\n \tmovs\tr7, r5\n \tasrs\tr6, r3, #13\n \tmovs\tr7, r5\n-\tldmia\tr2, {r2, r3, r6, r7}\n+\tldmia\tr2, {r2, r4, r6, r7}\n \tmovs\tr3, r4\n-\tldmia\tr2!, {r4, r6, r7}\n+\tldmia\tr2!, {r3, r4, r6, r7}\n \tmovs\tr3, r4\n-\tldmia\tr2, {r1, r2, r3, r5, r7}\n+\tldmia\tr2, {r1, r2, r4, r5, r7}\n \tmovs\tr3, r4\n-\tldmia\tr2!, {r3, r4, r7}\n+\tldmia\tr2!, {r5, r7}\n \tmovs\tr3, r4\n-\tldmia\tr2!, {r5, r6}\n+\tldmia\tr2!, {r3, r5, r6}\n \tmovs\tr3, r4\n-\tldmia\tr2, {r1, r2, r3, r4, r5}\n+\tldmia\tr2, {r1, r2, r6}\n \tmovs\tr3, r4\n Contig::Contig(std::vector >*, ReadPool&):\n ./src/mira/contig.C:142\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr3, r1\n \tmov\tr5, r2\n \tsub\tsp, #52\t@ 0x34\n@@ -880973,29 +880972,29 @@\n \tmovs\tr7, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r6, #5\n \tmovs\tr7, r5\n \tstr\tr0, [r5, #44]\t@ 0x2c\n \tmovs\tr7, r5\n-\tstmia\tr7!, {r2, r5, r6}\n+\tstmia\tr7!, {r2, r3, r5, r6}\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #16\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r2, r3, r6}\n+\tstmia\tr7!, {r2, r4, r6}\n \tmovs\tr3, r4\n-\tstmia\tr7!, {r3, r4, r5}\n+\tstmia\tr7!, {r6}\n \tmovs\tr3, r4\n \tlsrs\tr0, r6, #1\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r5}\n+\tstmia\tr7!, {r3, r5}\n \tmovs\tr3, r4\n-\tstmia\tr7!, {r1, r2, r3}\n+\tstmia\tr7!, {r1, r2, r4}\n \tmovs\tr3, r4\n-\tstmia\tr6!, {r2, r3, r4, r5, r6, r7}\n+\tstmia\tr7!, {r2}\n \tmovs\tr3, r4\n \tlsrs\tr4, r5, #9\n \tmovs\tr0, r0\n \tstr\tr0, [r7, #16]\n \tmovs\tr7, r5\n \tmovs\tr6, #16\n \tmovs\tr7, r5\n@@ -882507,45 +882506,45 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #16\n \tmovs\tr7, r5\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tadds\tr6, r1, r7\n+\tadds\tr6, r2, r7\n \tmovs\tr4, r4\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tlsrs\tr6, r2, #6\n \tmovs\tr7, r5\n-\tstmia\tr6!, {r4, r6}\n+\tstmia\tr6!, {r3, r4, r6}\n \tmovs\tr3, r4\n-\tstmia\tr5!, {r1, r2, r6}\n+\tstmia\tr5!, {r1, r2, r3, r6}\n \tmovs\tr3, r4\n-\tpop\t{r1, r2, r4, r6, r7}\n+\tpop\t{r1, r2, r3, r4, r6, r7}\n \tmovs\tr3, r4\n-\tpop\t{r1, r2, r3, r6, r7}\n+\tpop\t{r1, r2, r4, r6, r7}\n \tmovs\tr3, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tpop\t{r2, r3, pc}\n+\tpop\t{r2, r4, pc}\n \tmovs\tr3, r4\n-\tpop\t{r1, r2, r5, r6}\n+\tpop\t{r1, r2, r3, r5, r6}\n \tmovs\tr3, r4\n-\tpop\t{r1, r3, r6, r7}\n+\tpop\t{r1, r4, r6, r7}\n \tmovs\tr3, r4\n-\tpop\t{r2}\n+\tpop\t{r2, r3}\n \tmovs\tr3, r4\n-\tpop\t{r1, r4, r6}\n+\tpop\t{r1, r3, r4, r6}\n \tmovs\tr3, r4\n-\tstrh\tr2, [r6, #54]\t@ 0x36\n+\tstrh\tr2, [r7, #54]\t@ 0x36\n \tmovs\tr5, r4\n-\tldr\tr0, [sp, #72]\t@ 0x48\n+\tldr\tr0, [sp, #104]\t@ 0x68\n \tmovs\tr5, r4\n \tlsrs\tr0, r3, #2\n \tmovs\tr0, r0\n \tadd\tr2, r9\n \tldrb.w\tr3, [r2, #88]\t@ 0x58\n \tcmp\tr3, #63\t@ 0x3f\n \tbne.w\t1bc796 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e962>\n@@ -882758,17 +882757,17 @@\n \tadds\tr1, #1\n \tblx\tb538 \n ./src/mira/contig.C:5799 (discriminator 16)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t1bd074 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f240>\n \tb.n\t1bd0e6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f2b2>\n-\tcbnz\tr6, 1bd0f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f2c4>\n+\tcbnz\tr6, 1bd0fa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f2c6>\n \tmovs\tr3, r4\n-\t\t\t@ instruction: 0xb830\n+\t\t\t@ instruction: 0xb838\n \tmovs\tr3, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldrh\tr6, [r7, #44]\t@ 0x2c\n \tmovs\tr2, r4\n@@ -884447,35 +884446,35 @@\n \tstc2l\t0, cr0, [ip, #184]!\t@ 0xb8\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tcbz\tr6, 1bdeea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x200b6>\n+\tcbz\tr6, 1bdeec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x200b8>\n \tmovs\tr3, r4\n-\tadd\tr1, pc, #736\t@ (adr r1, 1be164 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20330>)\n+\tadd\tr1, pc, #768\t@ (adr r1, 1be184 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20350>)\n \tmovs\tr3, r4\n-\tadd\tr1, pc, #928\t@ (adr r1, 1be228 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x203f4>)\n+\tadd\tr1, pc, #960\t@ (adr r1, 1be248 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20414>)\n \tmovs\tr3, r4\n-\tcbz\tr6, 1bde96 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20062>\n+\tcbz\tr6, 1bde98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20064>\n \tmovs\tr3, r4\n-\tadd\tr7, sp, #888\t@ 0x378\n+\tadd\tr7, sp, #920\t@ 0x398\n \tmovs\tr3, r4\n-\tadd\tr4, sp, #848\t@ 0x350\n+\tadd\tr4, sp, #880\t@ 0x370\n \tmovs\tr3, r4\n-\tadd\tr3, sp, #728\t@ 0x2d8\n+\tadd\tr3, sp, #760\t@ 0x2f8\n \tmovs\tr3, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #64\t@ 0x40\n+\tadd\tr4, sp, #96\t@ 0x60\n \tmovs\tr3, r4\n-\tadd\tr2, sp, #856\t@ 0x358\n+\tadd\tr2, sp, #888\t@ 0x378\n \tmovs\tr3, r4\n /usr/include/c++/10/bits/stl_deque.h:1533\n \tsub.w\tr5, lr, #88\t@ 0x58\n /usr/include/c++/10/bits/stl_deque.h:1532\n \tcmp\tr2, r5\n \tbeq.w\t1be152 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2031e>\n /usr/include/c++/10/bits/stl_deque.h:1537\n@@ -885339,42 +885338,42 @@\n ./src/mira/contig.C:4952\n \tmov\tr0, r9\n \tbl\t3e4670 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x220d8>\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr1, sp, #360\t@ 0x168\n+\tadd\tr1, sp, #392\t@ 0x188\n \tmovs\tr3, r4\n-\tadd\tr1, sp, #352\t@ 0x160\n+\tadd\tr1, sp, #384\t@ 0x180\n \tmovs\tr3, r4\n \tcdp\t0, 2, cr0, cr10, cr14, {1}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #552\t@ 0x228\n+\tadd\tr0, sp, #584\t@ 0x248\n \tmovs\tr3, r4\n-\tadd\tr6, pc, #976\t@ (adr r6, 1be8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20ac8>)\n+\tadd\tr6, pc, #1008\t@ (adr r6, 1be91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20ae8>)\n \tmovs\tr3, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #1016\t@ (adr r5, 1be930 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20afc>)\n+\tadd\tr6, pc, #24\t@ (adr r6, 1be550 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2071c>)\n \tmovs\tr3, r4\n-\tadd\tr6, pc, #16\t@ (adr r6, 1be54c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20718>)\n+\tadd\tr6, pc, #48\t@ (adr r6, 1be56c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20738>)\n \tmovs\tr3, r4\n-\tadd\tr6, pc, #592\t@ (adr r6, 1be790 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2095c>)\n+\tadd\tr6, pc, #624\t@ (adr r6, 1be7b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2097c>)\n \tmovs\tr3, r4\n-\tadd\tr6, pc, #608\t@ (adr r6, 1be7a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20970>)\n+\tadd\tr6, pc, #640\t@ (adr r6, 1be7c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20990>)\n \tmovs\tr3, r4\n-\tadd\tr5, pc, #568\t@ (adr r5, 1be780 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2094c>)\n+\tadd\tr5, pc, #600\t@ (adr r5, 1be7a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2096c>)\n \tmovs\tr3, r4\n-\tadd\tr7, pc, #976\t@ (adr r7, 1be91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20ae8>)\n+\tadd\tr7, pc, #1008\t@ (adr r7, 1be93c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20b08>)\n \tmovs\tr3, r4\n-\tadd\tr7, pc, #920\t@ (adr r7, 1be8e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20ab4>)\n+\tadd\tr7, pc, #952\t@ (adr r7, 1be908 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20ad4>)\n \tmovs\tr3, r4\n HDeque::mapinfo_t::lt_indexfrom(HDeque::mapinfo_t const&, HDeque::mapinfo_t const&):\n ./src/mira/../../src/mira/hdeque.H:60\n \tpush\t{r4, r5}\n \tldr\tr5, [r0, #0]\n \tldr\tr4, [r1, #0]\n \tldr\tr2, [r0, #4]\n@@ -885499,23 +885498,23 @@\n \tbeq.n\t1be5fa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x207c6>\n \tmov\tr0, r6\n \tblx\tr4\n \tmov\tr1, r0\n \tb.n\t1be5fa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x207c6>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n-\tadd\tr5, pc, #744\t@ (adr r5, 1be914 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20ae0>)\n+\tadd\tr5, pc, #776\t@ (adr r5, 1be934 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20b00>)\n \tmovs\tr3, r4\n \tldrd\tr0, r0, [lr, #184]\t@ 0xb8\n-\tadd\tr5, pc, #680\t@ (adr r5, 1be8dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20aa8>)\n+\tadd\tr5, pc, #712\t@ (adr r5, 1be8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20ac8>)\n \tmovs\tr3, r4\n-\tadd\tr5, pc, #624\t@ (adr r5, 1be8a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20a74>)\n+\tadd\tr5, pc, #656\t@ (adr r5, 1be8c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x20a94>)\n \tmovs\tr3, r4\n-\tstrh.w\tr0, [r2, r3, lsl #2]\n-\tadd\tr5, pc, #416\t@ (adr r5, 1be7e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x209ac>)\n+\tstrh.w\tr0, [sl, r3, lsl #2]\n+\tadd\tr5, pc, #448\t@ (adr r5, 1be800 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x209cc>)\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n ReadGroupLib::getStrainID(unsigned char):\n ./src/mira/../../src/mira/readgrouplib.H:296\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n@@ -886826,15 +886825,15 @@\n \tlsls\tr7, r1, #2\n \tb.n\t1beffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x211c8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1bf030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x211fc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr5, pc, #272\t@ (adr r5, 1bf144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21310>)\n+\tadd\tr5, pc, #320\t@ (adr r5, 1bf174 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21340>)\n \tmovs\tr2, r4\n std::__cxx11::_List_base >::_M_clear():\n /usr/include/c++/10/bits/list.tcc:66\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/list.tcc:70\n \tldr\tr4, [r0, #0]\n /usr/include/c++/10/bits/list.tcc:71\n@@ -887079,15 +887078,15 @@\n \tstmia.w\tsl, {r0, r1, r2}\n \tb.n\t1bf0f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x212c4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1bf2a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2146c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrb\tr4, [r1, #6]\n+\tldrb\tr0, [r3, #6]\n \tmovs\tr2, r4\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, Contig::consensustag_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr\tr3, [r0, #0]\n \tsub\tsp, #36\t@ 0x24\n@@ -887304,15 +887303,15 @@\n \tmovw\tr4, #65472\t@ 0xffc0\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t1bf47a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21646>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1bf4a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2166c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrb\tr2, [r1, #30]\n+\tstrb\tr6, [r2, #30]\n \tmovs\tr2, r4\n std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned int, PlacedContigReads::const_iterator const&):\n /usr/include/c++/10/bits/vector.tcc:509\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #2488]\t@ 1bfe64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22030>\n /usr/include/c++/10/bits/vector.tcc:512\n@@ -888313,15 +888312,15 @@\n \tblx\tb6dc \n \tbge.n\t1bfdc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f8c>\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbvc.n\t1bfdfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21fc8>\n \tmovs\tr6, r5\n-\tstr\tr7, [sp, #56]\t@ 0x38\n+\tstr\tr7, [sp, #104]\t@ 0x68\n \tmovs\tr2, r4\n std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t1c0016 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221e2>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -889237,15 +889236,15 @@\n \tmovw\tr5, #65528\t@ 0xfff8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t1c0568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22734>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1c071c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x228e8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldrh\tr2, [r7, #48]\t@ 0x30\n+\tldrh\tr6, [r0, #50]\t@ 0x32\n \tmovs\tr2, r4\n std::vector >, std::allocator > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t1c08be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22a8a>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -890160,15 +890159,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t1c0e12 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22fde>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1c0fc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x23194>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstrh\tr0, [r2, #44]\t@ 0x2c\n+\tstrh\tr4, [r3, #44]\t@ 0x2c\n \tmovs\tr2, r4\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, Read*&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #3758096384\t@ 0xe0000000\n@@ -890273,15 +890272,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t1c1078 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x23244>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1c1098 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x23264>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrh\tr4, [r2, r6]\n+\tldrh\tr0, [r4, r6]\n \tmovs\tr2, r4\n std::__cxx11::_List_base >, std::allocator > > >::_M_clear():\n /usr/include/c++/10/bits/list.tcc:66\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/list.tcc:70\n \tldr.w\tr8, [r0]\n /usr/include/c++/10/bits/list.tcc:71\n@@ -890552,15 +890551,15 @@\n \tstrh.w\tip, [r8]\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t1c1250 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2341c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1c1334 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x23500>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr6, [r6, r3]\n+\tldr\tr2, [r0, r4]\n \tmovs\tr2, r4\n HDeque::hditer::increment():\n ./src/mira/../../src/mira/hdeque.H:147\n \tldr\tr2, [pc, #212]\t@ (1c1410 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x235dc>)\n \tldr\tr3, [pc, #216]\t@ (1c1414 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x235e0>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -891202,15 +891201,15 @@\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xb88a\n \tmovs\tr6, r5\n \t\t\t@ instruction: 0xb854\n \tmovs\tr6, r5\n-\tstrb\tr0, [r4, #16]\n+\tstrb\tr0, [r5, #16]\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -892825,15 +892824,15 @@\n \tcmp.w\tr9, #0\n \tbeq.n\t1c23cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x24598>\n \tb.n\t1c23e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x245b4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1c2418 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x245e4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr0, [pc, #72]\t@ (1c2464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x24630>)\n+\tldr\tr0, [pc, #120]\t@ (1c2494 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x24660>)\n \tmovs\tr2, r4\n std::deque >::_M_new_elements_at_back(unsigned int):\n /usr/include/c++/10/bits/deque.tcc:903\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr5, r0\n /usr/include/c++/10/bits/stl_deque.h:356\n \tldr\tr6, [r0, #36]\t@ 0x24\n@@ -893200,15 +893199,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133 (discriminator 2)\n \tblx\tb538 \n /usr/include/c++/10/bits/deque.tcc:920 (discriminator 2)\n \tb.n\t1c269a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x24866>\n /usr/include/c++/10/bits/deque.tcc:918\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tldmia\tr1, {r1, r2, r3, r5, r6}\n+\tldmia\tr1, {r1, r3, r4, r5, r6}\n \tmovs\tr2, r4\n std::deque >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/deque.tcc:353\n \tcbnz\tr1, 1c26c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x24890>\n \tbx\tlr\n /usr/include/c++/10/bits/deque.tcc:350\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -894301,15 +894300,15 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/deque.tcc:920 (discriminator 2)\n \tb.n\t1c2e48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x25014>\n /usr/include/c++/10/bits/deque.tcc:918\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tstmia\tr1!, {r6, r7}\n+\tstmia\tr1!, {r2, r3, r6, r7}\n \tmovs\tr2, r4\n std::deque::mapinfo_t, std::allocator::mapinfo_t> >::_M_new_elements_at_front(unsigned int):\n /usr/include/c++/10/bits/deque.tcc:878\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/stl_deque.h:356\n \tldr\tr3, [r0, #36]\t@ 0x24\n \tldr\tr5, [r0, #20]\n@@ -894583,15 +894582,15 @@\n \tmov.w\tr1, #512\t@ 0x200\n \tblx\tb538 \n /usr/include/c++/10/bits/deque.tcc:895 (discriminator 2)\n \tb.n\t1c304a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x25216>\n /usr/include/c++/10/bits/deque.tcc:893\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tldrh\tr6, [r2, r5]\n+\tldrh\tr6, [r3, r5]\n \tmovs\tr3, r4\n void std::deque::mapinfo_t, std::allocator::mapinfo_t> >::emplace_back::mapinfo_t>(HDeque::mapinfo_t&&):\n /usr/include/c++/10/bits/deque.tcc:164\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr6, r1\n /usr/include/c++/10/bits/deque.tcc:168\n \tldr\tr3, [r0, #32]\n@@ -894673,15 +894672,15 @@\n \tldr\tr7, [r5, #36]\t@ 0x24\n \tb.n\t1c30ca , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x25296>\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #8]\t@ (1c3108 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x252d4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tsubs\tr6, #76\t@ 0x4c\n+\tsubs\tr6, #88\t@ 0x58\n \tmovs\tr2, r4\n HDeque::clear():\n ./src/mira/../../src/mira/hdeque.H:511\n \tldr\tr2, [pc, #656]\t@ (1c33a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2556c>)\n ./src/mira/../../src/mira/hdeque.H:512\n \tmovs\tr1, #1\n ./src/mira/../../src/mira/hdeque.H:511\n@@ -896105,15 +896104,15 @@\n \tmov.w\tr1, #440\t@ 0x1b8\n \tblx\tb538 \n /usr/include/c++/10/bits/deque.tcc:895 (discriminator 2)\n \tb.n\t1c3c14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x25de0>\n /usr/include/c++/10/bits/deque.tcc:893\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tldr\tr7, [pc, #560]\t@ (1c3e6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x26038>)\n+\tldr\tr7, [pc, #592]\t@ (1c3e8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x26058>)\n \tmovs\tr3, r4\n std::deque >::_M_new_elements_at_back(unsigned int):\n /usr/include/c++/10/bits/deque.tcc:903\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/stl_deque.h:356\n \tldr\tr3, [r0, #20]\n \tldr\tr4, [r0, #36]\t@ 0x24\n@@ -896400,15 +896399,15 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/deque.tcc:920 (discriminator 2)\n \tb.n\t1c3e20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x25fec>\n /usr/include/c++/10/bits/deque.tcc:918\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tcbz\tr0, 1c3e82 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2604e>\n+\tcbz\tr4, 1c3e84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x26050>\n \tmovs\tr2, r4\n void std::__fill_a1(std::_Deque_iterator const&, std::_Deque_iterator const&, Contig::consensus_counts_t const&):\n /usr/include/c++/10/bits/deque.tcc:978\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr7, r1\n /usr/include/c++/10/bits/deque.tcc:983\n \tldr\tr6, [r0, #12]\n@@ -902676,15 +902675,15 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/stl_deque.h:1004 (discriminator 1)\n \tvmov\tr0, s19\n \tbl\t1c141c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x235e8>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tb.n\t1c6afc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x28cc8>\n \tnop\n-\tlsls\tr6, r3, #17\n+\tlsls\tr2, r5, #17\n \tmovs\tr2, r4\n HDeque::priv_resize_grow_back(unsigned int, Contig::consensus_counts_t const&):\n ./src/mira/../../src/mira/hdeque.H:351\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n \tldr\tr0, [pc, #880]\t@ (1c6e88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x29054>)\n \tvpush\t{d8-d9}\n@@ -904136,17 +904135,17 @@\n \tmovs\tr6, r5\n \tldrh\tr2, [r6, r5]\n \tmovs\tr6, r5\n \tldrh\tr4, [r2, r5]\n \tmovs\tr6, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr2, r4, #15\n+\tasrs\tr2, r5, #15\n \tmovs\tr3, r4\n-\tasrs\tr0, r2, #15\n+\tasrs\tr0, r3, #15\n \tmovs\tr3, r4\n HDeque::priv_insert(HDeque::hditer, unsigned int, Contig::consensus_counts_t const&):\n ./src/mira/../../src/mira/hdeque.H:397\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr\tr1, [pc, #836]\t@ (1c7b70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x29d3c>)\n \tmov\tr9, r2\n@@ -904593,15 +904592,15 @@\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsb\tr2, [r4, r4]\n \tmovs\tr6, r5\n \tstrb\tr2, [r7, r2]\n \tmovs\tr6, r5\n-\tasrs\tr4, r3, #3\n+\tasrs\tr4, r4, #3\n \tmovs\tr3, r4\n \tasrs\tr0, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -907300,23 +907299,23 @@\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [pc, #120]\t@ (1c9088 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2b254>)\n \tmovs\tr6, r5\n \tldr\tr0, [pc, #56]\t@ (1c904c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2b218>)\n \tmovs\tr6, r5\n-\tvhadd.u8\td0, d6, d18\n+\tvhadd.u8\td0, d14, d18\n \tlsrs\tr0, r6, #14\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcdp2\t0, 13, cr0, cr10, cr2, {1}\n-\tcdp2\t0, 11, cr0, cr0, cr2, {1}\n+\tcdp2\t0, 14, cr0, cr2, cr2, {1}\n+\tcdp2\t0, 11, cr0, cr8, cr2, {1}\n multitag_t::newIdentifier(char const*):\n ./src/mira/../../src/mira/multitag.H:219\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr2, [pc, #192]\t@ (1c90f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2b2c0>)\n \tsub\tsp, #32\n \tldr\tr3, [pc, #192]\t@ (1c90f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2b2c4>)\n \tadd\tr2, pc\n@@ -907930,15 +907929,15 @@\n /usr/include/c++/10/bits/vector.tcc:643\n \tblx\tb080 <__cxa_begin_catch@plt>\n /usr/include/c++/10/bits/stl_vector.h:350\n \tb.n\t1c94da , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2b6a6>\n /usr/include/c++/10/bits/vector.tcc:643\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tlsls\tr0, r1, #2\n+\tlsls\tr4, r2, #2\n \tmovs\tr2, r4\n void std::__adjust_heap(char*, int, int, char, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.0]:\n /usr/include/c++/10/bits/stl_heap.h:223\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/stl_heap.h:228\n \tadd.w\tr8, r2, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/stl_heap.h:237\n@@ -911915,19 +911914,19 @@\n \tmovs\tr0, r0\n \tsubs\tr6, r7, #3\n \tmovs\tr6, r5\n \tadds\tr6, #132\t@ 0x84\n \tmovs\tr6, r5\n \tsubs\tr2, r4, #3\n \tmovs\tr6, r5\n-\tbgt.n\t1cb08c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d258>\n+\tbgt.n\t1cb09c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d268>\n \tmovs\tr2, r4\n-\tbgt.n\t1cb088 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d254>\n+\tbgt.n\t1cb098 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d264>\n \tmovs\tr2, r4\n-\tbgt.n\t1cb058 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d224>\n+\tbgt.n\t1cb068 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d234>\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const [clone .constprop.0]:\n ./src/mira/../../src/mira/stringcontainer.H:114\n@@ -912213,17 +912212,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbnz\tr6, 1cb3ce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d59a>\n+\tcbnz\tr2, 1cb3d2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d59e>\n \tmovs\tr1, r4\n-\tcbnz\tr4, 1cb3d2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d59e>\n+\tcbnz\tr0, 1cb3d6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d5a2>\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -913700,128 +913699,128 @@\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr6, r6, r5\n \tmovs\tr6, r5\n \tsubs\tr6, r0, r3\n \tmovs\tr6, r5\n-\tbls.n\t1cbf58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e124>\n+\tbls.n\t1cbf68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e134>\n \tmovs\tr2, r4\n-\tbls.n\t1cbf50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e11c>\n+\tbls.n\t1cbf60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e12c>\n \tmovs\tr2, r4\n-\tbls.n\t1cbf58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e124>\n+\tbls.n\t1cbf68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e134>\n \tmovs\tr2, r4\n-\tbhi.n\t1cbfcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e198>\n+\tbhi.n\t1cbfdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1a8>\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbhi.n\t1cbeb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e084>\n+\tbhi.n\t1cbec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e094>\n \tmovs\tr2, r4\n-\tbhi.n\t1cbe84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e050>\n+\tbhi.n\t1cbe94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e060>\n \tmovs\tr2, r4\n-\tbvc.n\t1cbec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e094>\n+\tbvc.n\t1cbed8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0a4>\n \tmovs\tr2, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbvc.n\t1cbfc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e194>\n+\tbvc.n\t1cbfd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1a4>\n \tmovs\tr2, r4\n-\tbvc.n\t1cbf68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e134>\n+\tbvc.n\t1cbf78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e144>\n \tmovs\tr2, r4\n-\tbvs.n\t1cbf2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0f8>\n+\tbvs.n\t1cbf3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e108>\n \tmovs\tr2, r4\n-\tbvs.n\t1cbe88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e054>\n+\tbvs.n\t1cbe98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e064>\n \tmovs\tr2, r4\n-\tbvs.n\t1cbe7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e048>\n+\tbvs.n\t1cbe8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e058>\n \tmovs\tr2, r4\n-\tbvs.n\t1cbfa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e16c>\n+\tbvs.n\t1cbfb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e17c>\n \tmovs\tr2, r4\n-\tbvs.n\t1cbe5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e028>\n+\tbvs.n\t1cbe6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e038>\n \tmovs\tr2, r4\n-\tbvs.n\t1cc050 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e21c>\n+\tbvs.n\t1cbe60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e02c>\n \tmovs\tr2, r4\n-\tbpl.n\t1cbe94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e060>\n+\tbpl.n\t1cbea4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e070>\n \tmovs\tr2, r4\n-\tbvs.n\t1cbefc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0c8>\n+\tbvs.n\t1cbf0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0d8>\n \tmovs\tr2, r4\n-\tbvs.n\t1cbef8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0c4>\n+\tbvs.n\t1cbf08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0d4>\n \tmovs\tr2, r4\n-\teor.w\tr0, r8, #34\t@ 0x22\n-\tbmi.n\t1cbf3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e108>\n+\teors.w\tr0, r0, #34\t@ 0x22\n+\tbmi.n\t1cbf4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e118>\n \tmovs\tr2, r4\n-\tbpl.n\t1cc038 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e204>\n+\tbpl.n\t1cc048 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e214>\n \tmovs\tr2, r4\n-\tbpl.n\t1cbfec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1b8>\n+\tbpl.n\t1cbffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1c8>\n \tmovs\tr2, r4\n-\tbmi.n\t1cc030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1fc>\n+\tbmi.n\t1cc040 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e20c>\n \tmovs\tr2, r4\n-\tbmi.n\t1cbf44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e110>\n+\tbmi.n\t1cbf54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e120>\n \tmovs\tr2, r4\n-\tbmi.n\t1cbee0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0ac>\n+\tbmi.n\t1cbef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0bc>\n \tmovs\tr2, r4\n-\tbcc.n\t1cbf24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0f0>\n+\tbcc.n\t1cbf34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e100>\n \tmovs\tr2, r4\n-\tbmi.n\t1cc04c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e218>\n+\tbmi.n\t1cc05c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e228>\n \tmovs\tr2, r4\n-\tbmi.n\t1cc03c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e208>\n+\tbmi.n\t1cc04c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e218>\n \tmovs\tr2, r4\n-\tbgt.n\t1cc000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1cc>\n+\tbgt.n\t1cc010 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1dc>\n \tmovs\tr3, r4\n-\tbcc.n\t1cbfec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1b8>\n+\tbcc.n\t1cbffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1c8>\n \tmovs\tr2, r4\n-\tbcc.n\t1cbf4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e118>\n+\tbcc.n\t1cbf5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e128>\n \tmovs\tr2, r4\n-\tbcc.n\t1cbf04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0d0>\n+\tbcc.n\t1cbf14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0e0>\n \tmovs\tr2, r4\n-\tblt.n\t1cbec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e094>\n+\tblt.n\t1cbed8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0a4>\n \tmovs\tr3, r4\n-\tbcs.n\t1cbeb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e080>\n+\tbcs.n\t1cbec4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e090>\n \tmovs\tr2, r4\n-\tbcc.n\t1cc038 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e204>\n+\tbcc.n\t1cc048 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e214>\n \tmovs\tr2, r4\n-\tbcc.n\t1cbfd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1a4>\n+\tbcc.n\t1cbfe8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1b4>\n \tmovs\tr2, r4\n-\tbge.n\t1cbf9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e168>\n+\tbge.n\t1cbfac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e178>\n \tmovs\tr3, r4\n-\tbne.n\t1cbf88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e154>\n+\tbne.n\t1cbf98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e164>\n \tmovs\tr2, r4\n-\tbcs.n\t1cbf18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0e4>\n+\tbcs.n\t1cbf28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0f4>\n \tmovs\tr2, r4\n-\tbcs.n\t1cc0a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e26c>\n+\tbcs.n\t1cc0b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e27c>\n \tmovs\tr2, r4\n-\tbge.n\t1cc068 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e234>\n+\tbge.n\t1cc078 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e244>\n \tmovs\tr3, r4\n-\tbne.n\t1cc058 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e224>\n+\tbne.n\t1cc068 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e234>\n \tmovs\tr2, r4\n-\tbcs.n\t1cbff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1c0>\n+\tbcs.n\t1cc004 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1d0>\n \tmovs\tr2, r4\n-\tbcs.n\t1cbfec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1b8>\n+\tbcs.n\t1cbffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1c8>\n \tmovs\tr2, r4\n-\tbls.n\t1cbf28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0f4>\n+\tbls.n\t1cbf38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e104>\n \tmovs\tr3, r4\n-\tbeq.n\t1cbf18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0e4>\n+\tbeq.n\t1cbf28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0f4>\n \tmovs\tr2, r4\n-\tbne.n\t1cbf18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0e4>\n+\tbne.n\t1cbf28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e0f4>\n \tmovs\tr2, r4\n-\tbne.n\t1cc0c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e290>\n+\tbne.n\t1cc0d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e2a0>\n \tmovs\tr2, r4\n-\tbls.n\t1cc000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1cc>\n+\tbls.n\t1cc010 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1dc>\n \tmovs\tr3, r4\n-\tbeq.n\t1cbff0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1bc>\n+\tbeq.n\t1cc000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1cc>\n \tmovs\tr2, r4\n-\tbne.n\t1cc020 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1ec>\n+\tbne.n\t1cc030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1fc>\n \tmovs\tr2, r4\n-\tbne.n\t1cc020 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1ec>\n+\tbne.n\t1cc030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1fc>\n \tmovs\tr2, r4\n-\tbne.n\t1cc01c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1e8>\n+\tbne.n\t1cc02c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e1f8>\n \tmovs\tr2, r4\n-\tbhi.n\t1cc0c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e294>\n+\tbhi.n\t1cc0d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e2a4>\n \tmovs\tr3, r4\n-\tldmia\tr7!, {r2, r3, r4, r6}\n+\tldmia\tr7!, {r2, r5, r6}\n \tmovs\tr2, r4\n Read::getTag(unsigned int) const:\n ./src/mira/read.C:4040\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r0\n \tldr\tr2, [pc, #480]\t@ (1cc1e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e3b4>)\n \tldr\tr3, [pc, #480]\t@ (1cc1ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e3b8>)\n@@ -914075,20 +914074,20 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr6, {r1, r2, r6}\n+\tldmia\tr6, {r1, r2, r3, r6}\n \tmovs\tr2, r4\n-\tldmia\tr6, {r1, r6}\n+\tldmia\tr6, {r1, r3, r6}\n \tmovs\tr2, r4\n-\tbics.w\tr0, r2, r3, asr #32\n-\tldmia\tr6!, {r3, r4}\n+\tbics.w\tr0, sl, r3, asr #32\n+\tldmia\tr6!, {r5}\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::checkQualities():\n ./src/mira/read.C:2647\n@@ -914283,19 +914282,19 @@\n \tb.n\t1cc380 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2e54c>\n \tlsrs\tr0, r7, #20\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr6, r5, #20\n \tmovs\tr6, r5\n-\tadds\tr6, r3, r2\n+\tadds\tr2, r5, r2\n \tmovs\tr2, r4\n-\tldmia\tr4!, {r1, r2, r3, r5, r7}\n+\tldmia\tr4, {r1, r2, r4, r5, r7}\n \tmovs\tr2, r4\n-\tldmia\tr4!, {r2, r5, r7}\n+\tldmia\tr4!, {r2, r3, r5, r7}\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr6, r1, #16\n \tmovs\tr6, r5\n@@ -914530,23 +914529,23 @@\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #13\n \tmovs\tr6, r5\n \tlsrs\tr4, r1, #13\n \tmovs\tr6, r5\n-\tasrs\tr2, r1, #28\n+\tasrs\tr6, r2, #28\n \tmovs\tr2, r4\n-\tldmia\tr3!, {r1, r4, r6}\n+\tldmia\tr3, {r1, r3, r4, r6}\n \tmovs\tr2, r4\n-\tldmia\tr3, {r1, r3, r6}\n+\tldmia\tr3!, {r1, r4, r6}\n \tmovs\tr2, r4\n-\tldmia\tr3, {r1, r3, r4, r6}\n+\tldmia\tr3!, {r1, r5, r6}\n \tmovs\tr2, r4\n-\tldmia\tr3, {r2, r3, r4, r5}\n+\tldmia\tr3!, {r2, r6}\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::hasTag(StringContainer::Entry, int) const:\n ./src/mira/read.C:3948\n@@ -915019,21 +915018,21 @@\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr2, r3, #7\n \tmovs\tr6, r5\n \tlsrs\tr6, r7, #3\n \tmovs\tr6, r5\n-\tldmia\tr0!, {r1, r5}\n+\tldmia\tr0!, {r1, r3, r5}\n \tmovs\tr2, r4\n-\tldmia\tr0!, {r1, r2, r4}\n+\tldmia\tr0!, {r1, r2, r3, r4}\n \tmovs\tr2, r4\n-\tldr\tr4, [sp, #992]\t@ 0x3e0\n+\tldr\tr5, [sp, #0]\n \tmovs\tr4, r4\n-\tstmia\tr7!, {r1, r2, r5, r6, r7}\n+\tstmia\tr7!, {r1, r2, r3, r5, r6, r7}\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::countTags(StringContainer::Entry, int) const:\n ./src/mira/read.C:3995\n@@ -915580,21 +915579,21 @@\n \tmovs\tr6, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr6, r7, #24\n \tmovs\tr6, r5\n \tlsls\tr6, r3, #21\n \tmovs\tr6, r5\n-\tstmia\tr4!, {r2, r3, r5}\n+\tstmia\tr4!, {r2, r4, r5}\n \tmovs\tr2, r4\n-\tstmia\tr4!, {r5}\n+\tstmia\tr4!, {r3, r5}\n \tmovs\tr2, r4\n-\tldr\tr1, [sp, #8]\n+\tldr\tr1, [sp, #40]\t@ 0x28\n \tmovs\tr4, r4\n-\tstmia\tr4!, {r3, r4, r5}\n+\tstmia\tr4!, {r6}\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getQualityInSequence(unsigned int) const:\n ./src/mira/read.C:5146\n@@ -915850,21 +915849,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r3}\n+\tstmia\tr3!, {r1, r4}\n \tmovs\tr2, r4\n-\tstmia\tr2!, {r1, r2, r3, r4, r5, r6, r7}\n+\tstmia\tr3!, {r1, r2}\n \tmovs\tr2, r4\n-\tble.n\t1ccf78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f144>\n+\tble.n\t1ccf88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f154>\n \tmovs\tr3, r4\n-\tstmia\tr2!, {r1, r3, r4, r6, r7}\n+\tstmia\tr2!, {r1, r5, r6, r7}\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getQualityInComplementSequence(unsigned int) const:\n ./src/mira/read.C:5159\n@@ -916124,21 +916123,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r1, r3, r5, r6, r7}\n+\tstmia\tr0!, {r1, r4, r5, r6, r7}\n \tmovs\tr2, r4\n-\tstmia\tr0!, {r1, r2, r3, r4, r6, r7}\n+\tstmia\tr0!, {r1, r2, r5, r6, r7}\n \tmovs\tr2, r4\n-\tblt.n\t1cd158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f324>\n+\tblt.n\t1cd168 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f334>\n \tmovs\tr3, r4\n-\tstmia\tr0!, {r1, r2, r5, r6, r7}\n+\tstmia\tr0!, {r1, r2, r3, r5, r6, r7}\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getBPosHashStats(unsigned int) const:\n ./src/mira/read.C:5180\n@@ -916403,23 +916402,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbkpt\t0x00b4\n+\tbkpt\t0x00bc\n \tmovs\tr2, r4\n-\tit\tcs\n-\tmovcs\tr2, r4\n-\tbhi.n\t1cd320 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f4ec>\n+\twfi\n+\tmovs\tr2, r4\n+\tbhi.n\t1cd330 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f4fc>\n \tmovs\tr3, r4\n-\titte\teq\n+\titee\teq\n \tmoveq\tr2, r4\n-\tlsreq\tr0, r0, #18\n+\tlsrne\tr0, r0, #18\n \tmovne\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::renameReadPrefix(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/read.C:3190\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n@@ -917308,35 +917307,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpop\t{r1, r3, r4, r6, r7, pc}\n+\tpop\t{r1, r2, r5, r6, r7, pc}\n \tmovs\tr1, r4\n-\tpop\t{r1, r2, r3, r6, r7, pc}\n+\tpop\t{r1, r3, r4, r6, r7, pc}\n \tmovs\tr1, r4\n-\tb.n\t1cd558 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f724>\n+\tb.n\t1cd568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2f734>\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcbnz\tr6, 1cda48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc14>\n+\tcbnz\tr6, 1cda4a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc16>\n \tmovs\tr2, r4\n-\tcbnz\tr2, 1cda48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc14>\n+\tcbnz\tr2, 1cda4a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc16>\n \tmovs\tr2, r4\n \tstrh\tr2, [r1, #40]\t@ 0x28\n \tmovs\tr1, r4\n-\tcbnz\tr4, 1cda46 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc12>\n+\tcbnz\tr4, 1cda48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc14>\n \tmovs\tr2, r4\n-\tcbnz\tr2, 1cda50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc1c>\n+\tcbnz\tr2, 1cda52 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2fc1e>\n \tmovs\tr2, r4\n \tstrh\tr2, [r6, #38]\t@ 0x26\n \tmovs\tr1, r4\n \tstrh\tr2, [r5, #38]\t@ 0x26\n \tmovs\tr1, r4\n Read::getInternalTemplateName_SRARaw(std::__cxx11::basic_string, std::allocator >&, unsigned char&):\n ./src/mira/read.C:5487\n@@ -918208,46 +918207,46 @@\n \t...\n \tadd.w\tr0, lr, #11337728\t@ 0xad0000\n \t\t\t@ instruction: 0xf4fa002d\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr2, #54\t@ 0x36\n+\tcmp\tr2, #62\t@ 0x3e\n \tmovs\tr3, r4\n \torrs.w\tr0, lr, #11337728\t@ 0xad0000\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r6, #42]\t@ 0x2a\n+\tldrh\tr6, [r7, #42]\t@ 0x2a\n \tmovs\tr1, r4\n-\tldrh\tr0, [r6, #42]\t@ 0x2a\n+\tldrh\tr4, [r7, #42]\t@ 0x2a\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tuxtb\tr0, r6\n+\tuxtb\tr0, r7\n \tmovs\tr2, r4\n-\tuxth\tr6, r6\n+\tuxth\tr6, r7\n \tmovs\tr2, r4\n-\tuxth\tr2, r2\n+\tuxth\tr2, r3\n \tmovs\tr2, r4\n-\tuxth\tr0, r5\n+\tuxth\tr0, r6\n \tmovs\tr2, r4\n \tldrb\tr4, [r1, #25]\n \tmovs\tr1, r4\n \tldrb\tr4, [r0, #25]\n \tmovs\tr1, r4\n Read::getInternalTemplateName_FR(std::__cxx11::basic_string, std::allocator >&, unsigned char&):\n ./src/mira/read.C:5448\n@@ -919120,46 +919119,46 @@\n \t...\n \tcdp\t0, 9, cr0, cr6, cr13, {1}\n \tcdp\t0, 8, cr0, cr2, cr13, {1}\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr3, #190\t@ 0xbe\n+\tmovs\tr3, #198\t@ 0xc6\n \tmovs\tr3, r4\n \tstcl\t0, cr0, [r6, #180]!\t@ 0xb4\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r6, #54]\t@ 0x36\n+\tstrh\tr0, [r0, #56]\t@ 0x38\n \tmovs\tr1, r4\n-\tstrh\tr2, [r6, #54]\t@ 0x36\n+\tstrh\tr6, [r7, #54]\t@ 0x36\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #448\t@ 0x1c0\n+\tadd\tr4, sp, #480\t@ 0x1e0\n \tmovs\tr2, r4\n-\tadd\tr4, sp, #216\t@ 0xd8\n+\tadd\tr4, sp, #248\t@ 0xf8\n \tmovs\tr2, r4\n-\tadd\tr4, sp, #72\t@ 0x48\n+\tadd\tr4, sp, #104\t@ 0x68\n \tmovs\tr2, r4\n-\tadd\tr4, sp, #160\t@ 0xa0\n+\tadd\tr4, sp, #192\t@ 0xc0\n \tmovs\tr2, r4\n \tstrb\tr4, [r1, #31]\n \tmovs\tr1, r4\n \tstrb\tr4, [r0, #31]\n \tmovs\tr1, r4\n Read::getInternalTemplateName_Sanger(std::__cxx11::basic_string, std::allocator >&, unsigned char&):\n ./src/mira/read.C:5354\n@@ -920068,47 +920067,47 @@\n \t...\n \t\t\t@ instruction: 0xe814002d\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xe804002d\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tadds\tr0, r0, #5\n+\tadds\tr0, r1, #5\n \tmovs\tr3, r4\n \tb.n\t1cec88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x30e54>\n \tmovs\tr5, r5\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr6, [r3, #2]\n+\tstrh\tr2, [r5, #2]\n \tmovs\tr1, r4\n-\tstrh\tr4, [r3, #2]\n+\tstrh\tr0, [r5, #2]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #720\t@ (adr r5, 1cf0b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x31284>)\n+\tadd\tr5, pc, #752\t@ (adr r5, 1cf0d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x312a4>)\n \tmovs\tr2, r4\n-\tadd\tr5, pc, #488\t@ (adr r5, 1cefd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x311a0>)\n+\tadd\tr5, pc, #520\t@ (adr r5, 1ceff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x311c0>)\n \tmovs\tr2, r4\n-\tadd\tr5, pc, #344\t@ (adr r5, 1cef48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x31114>)\n+\tadd\tr5, pc, #376\t@ (adr r5, 1cef68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x31134>)\n \tmovs\tr2, r4\n-\tadd\tr5, pc, #432\t@ (adr r5, 1cefa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x31170>)\n+\tadd\tr5, pc, #464\t@ (adr r5, 1cefc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x31190>)\n \tmovs\tr2, r4\n \tstrb\tr0, [r2, #4]\n \tmovs\tr1, r4\n \tstrb\tr0, [r1, #4]\n \tmovs\tr1, r4\n Read::getInternalTemplateName_StLouis(std::__cxx11::basic_string, std::allocator >&, unsigned char&):\n ./src/mira/read.C:5582\n@@ -921029,47 +921028,47 @@\n \tmovs\tr5, r5\n \tb.n\t1cf6fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x318c8>\n \tmovs\tr5, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr6, r7, #25\n+\tasrs\tr6, r0, #26\n \tmovs\tr3, r4\n \tb.n\t1cf5d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x317a0>\n \tmovs\tr5, r5\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr6, [r7, #5]\n+\tldrb\tr2, [r1, #6]\n \tmovs\tr1, r4\n-\tldrb\tr4, [r7, #5]\n+\tldrb\tr0, [r1, #6]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #896]\t@ 0x380\n+\tldr\tr6, [sp, #928]\t@ 0x3a0\n \tmovs\tr2, r4\n-\tldr\tr6, [sp, #664]\t@ 0x298\n+\tldr\tr6, [sp, #696]\t@ 0x2b8\n \tmovs\tr2, r4\n-\tldr\tr6, [sp, #520]\t@ 0x208\n+\tldr\tr6, [sp, #552]\t@ 0x228\n \tmovs\tr2, r4\n-\tldr\tr6, [sp, #608]\t@ 0x260\n+\tldr\tr6, [sp, #640]\t@ 0x280\n \tmovs\tr2, r4\n \tldr\tr4, [r7, #32]\n \tmovs\tr1, r4\n \tldr\tr4, [r6, #32]\n \tmovs\tr1, r4\n Read::getInternalTemplateName_TIGR(std::__cxx11::basic_string, std::allocator >&, unsigned char&):\n ./src/mira/read.C:5402\n@@ -922145,49 +922144,49 @@\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbge.n\t1cfd30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x31efc>\n \tmovs\tr5, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #304]\t@ 0x130\n+\tldr\tr5, [sp, #336]\t@ 0x150\n \tmovs\tr2, r4\n \tbvc.n\t1cfbb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x31d84>\n \tmovs\tr5, r5\n-\tldr\tr2, [sp, #784]\t@ 0x310\n+\tldr\tr2, [sp, #816]\t@ 0x330\n \tmovs\tr2, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr4, [r7, #7]\n+\tstrb\tr0, [r1, #8]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r7, #7]\n+\tstrb\tr6, [r0, #8]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #856]\t@ 0x358\n+\tstr\tr6, [sp, #888]\t@ 0x378\n \tmovs\tr2, r4\n-\tstr\tr6, [sp, #752]\t@ 0x2f0\n+\tstr\tr6, [sp, #784]\t@ 0x310\n \tmovs\tr2, r4\n-\tstr\tr6, [sp, #1016]\t@ 0x3f8\n+\tstr\tr7, [sp, #24]\n \tmovs\tr2, r4\n-\tstr\tr6, [sp, #784]\t@ 0x310\n+\tstr\tr6, [sp, #816]\t@ 0x330\n \tmovs\tr2, r4\n \tstr\tr0, [r5, #36]\t@ 0x24\n \tmovs\tr1, r4\n \tstr\tr0, [r4, #36]\t@ 0x24\n \tmovs\tr1, r4\n \tstr\tr0, [r3, #36]\t@ 0x24\n \tmovs\tr1, r4\n@@ -923202,15 +923201,15 @@\n \tmovs\tr5, r5\n \tbcs.n\t1d0318 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x324e4>\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #40\t@ 0x28\n+\tadd\tr6, sp, #88\t@ 0x58\n \tmovs\tr1, r4\n \tldmia\tr7, {r3, r6, r7}\n \tmovs\tr5, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n@@ -923218,33 +923217,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [r7, #36]\t@ 0x24\n+\tldr\tr6, [r0, #40]\t@ 0x28\n \tmovs\tr1, r4\n-\tldr\tr6, [r6, #36]\t@ 0x24\n+\tldr\tr2, [r0, #40]\t@ 0x28\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr0, [r5, #16]\n+\tldr\tr4, [r6, #16]\n \tmovs\tr1, r4\n-\tldr\tr4, [r4, #16]\n+\tldr\tr0, [r6, #16]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrh\tr0, [r1, #50]\t@ 0x32\n+\tldrh\tr0, [r2, #50]\t@ 0x32\n \tmovs\tr2, r4\n-\tldrh\tr6, [r3, #50]\t@ 0x32\n+\tldrh\tr6, [r4, #50]\t@ 0x32\n \tmovs\tr2, r4\n \tldr\tr1, [pc, #260]\t@ (1d0568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x32734>)\n \tmov\tr3, r2\n \tldr\tr0, [pc, #260]\t@ (1d056c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x32738>)\n \tmov\tr2, r8\n \tadd\tr1, pc\n \tadd\tr0, pc\n@@ -923381,17 +923380,17 @@\n \tadds\tr1, #1\n \tblx\tb538 \n ./src/mira/../../src/mira/stringcontainer.H:116\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t1d04e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x326ae>\n \tb.n\t1d055e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3272a>\n-\tldrh\tr4, [r4, #48]\t@ 0x30\n+\tldrh\tr4, [r5, #48]\t@ 0x30\n \tmovs\tr2, r4\n-\tldrh\tr2, [r5, #46]\t@ 0x2e\n+\tldrh\tr2, [r6, #46]\t@ 0x2e\n \tmovs\tr2, r4\n \tldr\tr6, [r1, r6]\n \tmovs\tr1, r4\n \tldr\tr6, [r0, r6]\n \tmovs\tr1, r4\n Read::calcTemplateInfo():\n ./src/mira/read.C:5290\n@@ -923934,29 +923933,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr6, [r2, #22]\n+\tldrh\tr6, [r3, #22]\n \tmovs\tr2, r4\n-\tldrh\tr6, [r1, #52]\t@ 0x34\n+\tldrh\tr6, [r2, #52]\t@ 0x34\n \tmovs\tr3, r4\n-\tldrh\tr4, [r6, #20]\n+\tldrh\tr4, [r7, #20]\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr4, [r0, #16]\n+\tldrh\tr4, [r1, #16]\n \tmovs\tr2, r4\n-\tldrh\tr0, [r7, #42]\t@ 0x2a\n+\tldrh\tr0, [r0, #44]\t@ 0x2c\n \tmovs\tr3, r4\n-\tldrh\tr6, [r3, #12]\n+\tldrh\tr6, [r4, #12]\n \tmovs\tr2, r4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr9, sp, #96\t@ 0x60\n \tstr\tr2, [sp, #0]\n \tmov\tr0, r9\n /usr/include/c++/10/ostream:391\n \tldr.w\tr8, [pc, #716]\t@ 1d0c9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x32e68>\n@@ -924325,31 +924324,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r7, #20]\n+\tldrh\tr6, [r0, #22]\n \tmovs\tr1, r4\n-\tldrh\tr6, [r5, #20]\n+\tldrh\tr2, [r7, #20]\n \tmovs\tr1, r4\n-\tsxtb\tr6, r7\n+\tuxth\tr6, r0\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr4, [r7, #56]\t@ 0x38\n+\tstrh\tr4, [r0, #58]\t@ 0x3a\n \tmovs\tr2, r4\n-\tstrh\tr2, [r6, #56]\t@ 0x38\n+\tstrh\tr2, [r7, #56]\t@ 0x38\n \tmovs\tr2, r4\n-\tstrh\tr4, [r2, #52]\t@ 0x34\n+\tstrh\tr4, [r3, #52]\t@ 0x34\n \tmovs\tr2, r4\n Read::getSCFFullPathName(std::__cxx11::basic_string, std::allocator >&) const:\n ./src/mira/read.C:3214\n \tldr.w\tr2, [pc, #1632]\t@ 1d1338 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x33504>\n \tldr.w\tr3, [pc, #1632]\t@ 1d133c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x33508>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -925179,15 +925178,15 @@\n \tmovs\tr0, r0\n \tstmia\tr2!, {r4, r5, r6}\n \tmovs\tr5, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstrh\tr0, [r3, #44]\t@ 0x2c\n+\tstrh\tr0, [r4, #44]\t@ 0x2c\n \tmovs\tr2, r4\n \tstmia\tr1!, {r1, r2, r4, r5, r6}\n \tmovs\tr5, r5\n \tstmia\tr1!, {r1, r4, r6}\n \tmovs\tr5, r5\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n@@ -925195,41 +925194,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r5, #44]\t@ 0x2c\n+\tstrh\tr0, [r7, #44]\t@ 0x2c\n \tmovs\tr1, r4\n-\tstrh\tr0, [r4, #44]\t@ 0x2c\n+\tstrh\tr4, [r5, #44]\t@ 0x2c\n \tmovs\tr1, r4\n-\tadd\tr5, sp, #448\t@ 0x1c0\n+\tadd\tr5, sp, #480\t@ 0x1e0\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr2, [r7, #34]\t@ 0x22\n+\tstrh\tr6, [r0, #36]\t@ 0x24\n \tmovs\tr1, r4\n-\tstrh\tr6, [r5, #34]\t@ 0x22\n+\tstrh\tr2, [r7, #34]\t@ 0x22\n \tmovs\tr1, r4\n-\tadd\tr4, sp, #248\t@ 0xf8\n+\tadd\tr4, sp, #280\t@ 0x118\n \tmovs\tr3, r4\n-\tldr\tr4, [r7, r7]\n+\tldrh\tr0, [r1, r0]\n \tmovs\tr1, r4\n-\tldr\tr2, [r7, r7]\n+\tldrh\tr6, [r0, r0]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrb\tr2, [r2, #1]\n+\tldrb\tr6, [r3, #1]\n \tmovs\tr1, r4\n \tldr\tr3, [pc, #280]\t@ (1d14c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3368c>)\n \tmovs\tr1, r4\n \tb.n\t1d13da , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x335a6>\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #24]\n /usr/include/c++/10/bits/basic_string.h:231\n@@ -925839,17 +925838,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr4, [r4, r5]\n+\tstrb\tr0, [r6, r5]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r4, r5]\n+\tstrb\tr6, [r5, r5]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -926181,17 +926180,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr4, [r3, #7]\n+\tldrb\tr4, [r4, #7]\n \tmovs\tr2, r4\n-\tldrb\tr6, [r2, #7]\n+\tldrb\tr6, [r3, #7]\n \tmovs\tr2, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n Read::reserve(unsigned int):\n ./src/mira/read.C:542\n@@ -926411,15 +926410,15 @@\n \tadds\tr3, #2\n \tstrh.w\tip, [r8]\n \tb.n\t1d1bce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x33d9a>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #4]\t@ (1d1c9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x33e68>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstmia\tr7!, {r1, r2, r5, r7}\n+\tstmia\tr7!, {r1, r4, r5, r7}\n \tmovs\tr1, r4\n Read::dumpStringContainerStats(std::ostream&):\n ./src/mira/read.C:384\n \tpush\t{r4, lr}\n \tmov\tr1, r0\n \tldr\tr4, [pc, #40]\t@ (1d1cd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x33e9c>)\n \tsub\tsp, #8\n@@ -926874,32 +926873,32 @@\n \tmovs\tr0, r0\n \tcbz\tr6, 1d2028 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x341f4>\n \tmovs\tr5, r5\n \tlsrs\tr0, r3, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r1, #21]\n+\tstrb\tr4, [r2, #21]\n \tmovs\tr2, r4\n-\tstrb\tr6, [r0, #21]\n+\tstrb\tr6, [r1, #21]\n \tmovs\tr2, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr2, [r2, #19]\n-\tmovs\tr2, r4\n \tstrb\tr2, [r3, #19]\n \tmovs\tr2, r4\n+\tstrb\tr2, [r4, #19]\n+\tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tadd\tr7, sp, #872\t@ 0x368\n \tmovs\tr5, r5\n Read::postLoadEXPFASTA():\n@@ -928014,53 +928013,53 @@\n \t...\n \tadd\tr4, sp, #144\t@ 0x90\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr4, sp, #16\n \tmovs\tr5, r5\n-\tstr\tr7, [sp, #776]\t@ 0x308\n+\tstr\tr7, [sp, #808]\t@ 0x328\n \tmovs\tr2, r4\n-\tstr\tr7, [sp, #744]\t@ 0x2e8\n+\tstr\tr7, [sp, #776]\t@ 0x308\n \tmovs\tr2, r4\n \tadd\tr3, sp, #472\t@ 0x1d8\n \tmovs\tr5, r5\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr7, [sp, #456]\t@ 0x1c8\n+\tstr\tr7, [sp, #488]\t@ 0x1e8\n \tmovs\tr3, r4\n-\tldr\tr2, [r5, #88]\t@ 0x58\n+\tldr\tr2, [r6, #88]\t@ 0x58\n \tmovs\tr2, r4\n-\tldr\tr6, [r4, #88]\t@ 0x58\n+\tldr\tr6, [r5, #88]\t@ 0x58\n \tmovs\tr2, r4\n-\tstr\tr6, [sp, #96]\t@ 0x60\n+\tstr\tr6, [sp, #128]\t@ 0x80\n \tmovs\tr3, r4\n-\tldr\tr6, [r5, #84]\t@ 0x54\n+\tldr\tr6, [r6, #84]\t@ 0x54\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #144]\t@ 0x90\n+\tstr\tr6, [sp, #176]\t@ 0xb0\n \tmovs\tr3, r4\n-\tldr\tr4, [r4, #72]\t@ 0x48\n+\tldr\tr4, [r5, #72]\t@ 0x48\n \tmovs\tr2, r4\n-\tldr\tr0, [r3, #68]\t@ 0x44\n+\tldr\tr0, [r4, #68]\t@ 0x44\n \tmovs\tr2, r4\n-\tstr\tr4, [sp, #808]\t@ 0x328\n+\tstr\tr4, [sp, #840]\t@ 0x348\n \tmovs\tr3, r4\n-\tldr\tr0, [r4, #64]\t@ 0x40\n+\tldr\tr0, [r5, #64]\t@ 0x40\n \tmovs\tr2, r4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #96\t@ 0x60\n \tadd.w\tr8, sp, #32\n \tmov\tr0, sl\n \tblx\tbcc4 \n \tldr\tr1, [pc, #668]\t@ (1d2bc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x34d8c>)\n@@ -928402,25 +928401,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbz\tr4, 1d2c0a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x34dd6>\n+\tcbz\tr0, 1d2c0e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x34dda>\n \tmovs\tr1, r4\n-\tldr\tr0, [r0, #48]\t@ 0x30\n+\tldr\tr0, [r1, #48]\t@ 0x30\n \tmovs\tr2, r4\n-\tldr\tr0, [r7, #44]\t@ 0x2c\n+\tldr\tr0, [r0, #48]\t@ 0x30\n \tmovs\tr2, r4\n-\tldr\tr4, [r5, #44]\t@ 0x2c\n+\tldr\tr4, [r6, #44]\t@ 0x2c\n \tmovs\tr2, r4\n-\tsubs\tr3, #70\t@ 0x46\n+\tsubs\tr3, #78\t@ 0x4e\n \tmovs\tr4, r4\n-\tldr\tr4, [r3, #36]\t@ 0x24\n+\tldr\tr4, [r4, #36]\t@ 0x24\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::setTags(std::vector > const&):\n ./src/mira/read.C:3841\n@@ -928608,25 +928607,25 @@\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr3, pc, #352\t@ (adr r3, 1d2ec4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x35090>)\n \tmovs\tr5, r5\n \tlsrs\tr0, r1, #12\n \tmovs\tr0, r0\n-\tldr\tr6, [r1, #20]\n+\tldr\tr6, [r2, #20]\n \tmovs\tr2, r4\n \tlsrs\tr4, r3, #25\n \tmovs\tr0, r0\n \tadd\tr3, pc, #56\t@ (adr r3, 1d2dac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x34f78>)\n \tmovs\tr5, r5\n-\tadd\tr7, sp, #40\t@ 0x28\n+\tadd\tr7, sp, #88\t@ 0x58\n \tmovs\tr1, r4\n-\tldr\tr6, [r5, #4]\n+\tldr\tr6, [r6, #4]\n \tmovs\tr2, r4\n-\tldr\tr4, [r6, #8]\n+\tldr\tr4, [r7, #8]\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n@@ -929378,77 +929377,77 @@\n \t...\n \tadd\tr0, pc, #560\t@ (adr r0, 1d3584 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x35750>)\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr0, pc, #480\t@ (adr r0, 1d353c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x35708>)\n \tmovs\tr5, r5\n-\tstr\tr4, [r4, #104]\t@ 0x68\n+\tstr\tr4, [r5, #104]\t@ 0x68\n \tmovs\tr2, r4\n-\tstr\tr2, [r4, #104]\t@ 0x68\n+\tstr\tr2, [r5, #104]\t@ 0x68\n \tmovs\tr2, r4\n-\tstr\tr6, [r7, #112]\t@ 0x70\n+\tstr\tr6, [r0, #116]\t@ 0x74\n \tmovs\tr2, r4\n-\tstr\tr4, [r4, #116]\t@ 0x74\n+\tstr\tr4, [r5, #116]\t@ 0x74\n \tmovs\tr2, r4\n-\tstr\tr4, [r6, #116]\t@ 0x74\n+\tstr\tr4, [r7, #116]\t@ 0x74\n \tmovs\tr2, r4\n-\tstr\tr4, [r3, #32]\n+\tstr\tr4, [r4, #32]\n \tmovs\tr3, r4\n-\tstr\tr0, [r5, #116]\t@ 0x74\n+\tstr\tr0, [r6, #116]\t@ 0x74\n \tmovs\tr2, r4\n-\tstr\tr2, [r3, #120]\t@ 0x78\n+\tstr\tr2, [r4, #120]\t@ 0x78\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [r2, #116]\t@ 0x74\n+\tstr\tr6, [r3, #116]\t@ 0x74\n \tmovs\tr2, r4\n-\tstr\tr0, [r5, #116]\t@ 0x74\n+\tstr\tr0, [r6, #116]\t@ 0x74\n \tmovs\tr2, r4\n-\tmovs\tr2, #248\t@ 0xf8\n+\tmovs\tr3, #0\n \tmovs\tr4, r4\n-\tstr\tr2, [r4, #116]\t@ 0x74\n+\tstr\tr2, [r5, #116]\t@ 0x74\n \tmovs\tr2, r4\n-\tstrb\tr0, [r6, r5]\n+\tstrb\tr0, [r7, r5]\n \tmovs\tr2, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tldr\tr6, [sp, #400]\t@ 0x190\n \tmovs\tr5, r5\n-\tstr\tr0, [r0, #84]\t@ 0x54\n+\tstr\tr0, [r1, #84]\t@ 0x54\n \tmovs\tr2, r4\n-\tstr\tr0, [r7, #80]\t@ 0x50\n+\tstr\tr0, [r0, #84]\t@ 0x54\n \tmovs\tr2, r4\n-\tstr\tr4, [r6, #76]\t@ 0x4c\n+\tstr\tr4, [r7, #76]\t@ 0x4c\n \tmovs\tr2, r4\n \tldr\tr6, [sp, #128]\t@ 0x80\n \tmovs\tr5, r5\n-\tstr\tr6, [r6, #72]\t@ 0x48\n+\tstr\tr6, [r7, #72]\t@ 0x48\n \tmovs\tr2, r4\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr6, [r0, #48]\t@ 0x30\n+\tstr\tr2, [r2, #48]\t@ 0x30\n \tmovs\tr1, r4\n-\tstr\tr2, [r7, #44]\t@ 0x2c\n+\tstr\tr6, [r0, #48]\t@ 0x30\n \tmovs\tr1, r4\n-\tldrh\tr2, [r1, #22]\n+\tldrh\tr2, [r2, #22]\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n operator<<(std::ostream&, Read const&):\n ./src/mira/read.C:994\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n@@ -930876,167 +930875,167 @@\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [sp, #368]\t@ 0x170\n \tmovs\tr5, r5\n \tldr\tr3, [sp, #144]\t@ 0x90\n \tmovs\tr5, r5\n-\tstr\tr6, [r2, #36]\t@ 0x24\n+\tstr\tr6, [r3, #36]\t@ 0x24\n \tmovs\tr2, r4\n-\tstr\tr6, [r7, #32]\n+\tstr\tr6, [r0, #36]\t@ 0x24\n \tmovs\tr2, r4\n-\tstr\tr0, [r6, #32]\n+\tstr\tr0, [r7, #32]\n \tmovs\tr2, r4\n-\tstr\tr2, [r4, #32]\n+\tstr\tr2, [r5, #32]\n \tmovs\tr2, r4\n-\tstr\tr4, [r2, #32]\n+\tstr\tr4, [r3, #32]\n \tmovs\tr2, r4\n-\tstr\tr6, [r0, #32]\n+\tstr\tr6, [r1, #32]\n \tmovs\tr2, r4\n-\tstr\tr0, [r7, #28]\n+\tstr\tr0, [r0, #32]\n \tmovs\tr2, r4\n-\tstr\tr2, [r5, #28]\n+\tstr\tr2, [r6, #28]\n \tmovs\tr2, r4\n-\tstr\tr4, [r3, #28]\n+\tstr\tr4, [r4, #28]\n \tmovs\tr2, r4\n-\tstr\tr4, [r1, #28]\n+\tstr\tr4, [r2, #28]\n \tmovs\tr2, r4\n-\tstr\tr2, [r7, #24]\n+\tstr\tr2, [r0, #28]\n \tmovs\tr2, r4\n-\tstr\tr4, [r5, #24]\n+\tstr\tr4, [r6, #24]\n \tmovs\tr2, r4\n-\tadds\tr2, r1, #2\n+\tadds\tr2, r2, #2\n \tmovs\tr4, r4\n-\tstr\tr2, [r2, #20]\n+\tstr\tr2, [r3, #20]\n \tmovs\tr2, r4\n-\tstr\tr0, [r5, #16]\n+\tstr\tr0, [r6, #16]\n \tmovs\tr2, r4\n-\tstr\tr0, [r2, #16]\n+\tstr\tr0, [r3, #16]\n \tmovs\tr2, r4\n-\tstr\tr6, [r6, #12]\n+\tstr\tr6, [r7, #12]\n \tmovs\tr2, r4\n-\tstr\tr4, [r5, #12]\n+\tstr\tr4, [r6, #12]\n \tmovs\tr2, r4\n-\tstr\tr0, [r5, #12]\n+\tstr\tr0, [r6, #12]\n \tmovs\tr2, r4\n-\tstr\tr0, [r3, #12]\n+\tstr\tr0, [r4, #12]\n \tmovs\tr2, r4\n-\tstr\tr4, [r1, #12]\n+\tstr\tr4, [r2, #12]\n \tmovs\tr2, r4\n-\tstr\tr2, [r1, #12]\n+\tstr\tr2, [r2, #12]\n \tmovs\tr2, r4\n-\tldr\tr5, [pc, #1008]\t@ (1d4394 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x36560>)\n+\tldr\tr6, [pc, #16]\t@ (1d3fb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x36180>)\n \tmovs\tr2, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr0, [r3, #8]\n+\tstr\tr0, [r4, #8]\n \tmovs\tr2, r4\n-\tstr\tr2, [r0, #8]\n+\tstr\tr2, [r1, #8]\n \tmovs\tr2, r4\n-\tstr\tr2, [r6, #4]\n+\tstr\tr2, [r7, #4]\n \tmovs\tr2, r4\n-\tstr\tr2, [r4, #4]\n+\tstr\tr2, [r5, #4]\n \tmovs\tr2, r4\n-\tstr\tr2, [r2, #4]\n+\tstr\tr2, [r3, #4]\n \tmovs\tr2, r4\n-\tstr\tr2, [r0, #4]\n+\tstr\tr2, [r1, #4]\n \tmovs\tr2, r4\n-\tstr\tr4, [r6, #0]\n+\tstr\tr4, [r7, #0]\n \tmovs\tr2, r4\n-\tstr\tr6, [r4, #0]\n+\tstr\tr6, [r5, #0]\n \tmovs\tr2, r4\n-\tstr\tr6, [r2, #0]\n+\tstr\tr6, [r3, #0]\n \tmovs\tr2, r4\n-\tsubs\tr0, r1, r1\n+\tsubs\tr0, r2, r1\n \tmovs\tr4, r4\n-\tldrsh\tr6, [r3, r7]\n+\tldrsh\tr6, [r4, r7]\n \tmovs\tr2, r4\n-\tldrsh\tr6, [r2, r7]\n+\tldrsh\tr6, [r3, r7]\n \tmovs\tr2, r4\n-\tldrsh\tr4, [r0, r7]\n+\tldrsh\tr4, [r1, r7]\n \tmovs\tr2, r4\n-\tldrsh\tr4, [r6, r6]\n+\tldrsh\tr4, [r7, r6]\n \tmovs\tr2, r4\n-\tldrsh\tr4, [r4, r6]\n+\tldrsh\tr4, [r5, r6]\n \tmovs\tr2, r4\n-\tldrsh\tr4, [r2, r6]\n+\tldrsh\tr4, [r3, r6]\n \tmovs\tr2, r4\n-\tldrsh\tr4, [r6, r5]\n+\tldrsh\tr4, [r7, r5]\n \tmovs\tr2, r4\n-\tldrsh\tr4, [r3, r5]\n+\tldrsh\tr4, [r4, r5]\n \tmovs\tr2, r4\n \tlsrs\tr0, r3, #26\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #760\t@ (adr r3, 1d42f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x364c4>)\n+\tadd\tr3, pc, #792\t@ (adr r3, 1d4318 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x364e4>)\n \tmovs\tr2, r4\n-\tldrsh\tr6, [r7, r3]\n+\tldrsh\tr6, [r0, r4]\n \tmovs\tr2, r4\n-\tldr\tr7, [sp, #600]\t@ 0x258\n+\tldr\tr7, [sp, #632]\t@ 0x278\n \tmovs\tr1, r5\n-\tldrsh\tr4, [r4, r1]\n+\tldrsh\tr4, [r5, r1]\n \tmovs\tr2, r4\n \tadd\tr3, sp, #984\t@ 0x3d8\n \tmovs\tr5, r5\n-\tldrsh\tr2, [r4, r1]\n+\tldrsh\tr2, [r5, r1]\n \tmovs\tr2, r4\n-\tldrsh\tr6, [r4, r2]\n+\tldrsh\tr6, [r5, r2]\n \tmovs\tr2, r4\n \tadd\tr3, sp, #720\t@ 0x2d0\n \tmovs\tr5, r5\n-\tldrsh\tr6, [r4, r2]\n+\tldrsh\tr6, [r5, r2]\n \tmovs\tr2, r4\n \tlsrs\tr4, r2, #1\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #424\t@ (adr r2, 1d41d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3639c>)\n+\tadd\tr2, pc, #456\t@ (adr r2, 1d41f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x363bc>)\n \tmovs\tr2, r4\n-\tldr\tr2, [r7, r5]\n+\tldr\tr6, [r0, r6]\n \tmovs\tr1, r4\n-\tldrsh\tr0, [r1, r0]\n+\tldrsh\tr0, [r2, r0]\n \tmovs\tr2, r4\n-\tldrb\tr0, [r4, r7]\n+\tldrb\tr0, [r5, r7]\n \tmovs\tr2, r4\n-\tldrb\tr6, [r2, r7]\n+\tldrb\tr6, [r3, r7]\n \tmovs\tr2, r4\n-\tldrb\tr6, [r2, r6]\n+\tldrb\tr6, [r3, r6]\n \tmovs\tr2, r4\n-\tldrb\tr4, [r3, r5]\n+\tldrb\tr4, [r4, r5]\n+\tmovs\tr2, r4\n+\tldrh\tr0, [r6, r6]\n+\tmovs\tr2, r4\n+\tldrh\tr2, [r6, r6]\n \tmovs\tr2, r4\n \tldrh\tr0, [r5, r6]\n \tmovs\tr2, r4\n-\tldrh\tr2, [r5, r6]\n+\tldrh\tr2, [r6, r6]\n \tmovs\tr2, r4\n-\tldrh\tr0, [r4, r6]\n+\tldrh\tr2, [r3, r7]\n \tmovs\tr2, r4\n-\tldrh\tr2, [r5, r6]\n+\tldrh\tr0, [r0, r7]\n \tmovs\tr2, r4\n-\tldrh\tr2, [r2, r7]\n+\tldrh\tr2, [r0, r7]\n \tmovs\tr2, r4\n \tldrh\tr0, [r7, r6]\n \tmovs\tr2, r4\n-\tldrh\tr2, [r7, r6]\n+\tldrh\tr2, [r5, r6]\n \tmovs\tr2, r4\n-\tldrh\tr0, [r6, r6]\n+\tldrh\tr0, [r4, r6]\n \tmovs\tr2, r4\n-\tldrh\tr2, [r4, r6]\n+\tldrh\tr6, [r5, r5]\n \tmovs\tr2, r4\n-\tldrh\tr0, [r3, r6]\n+\tldrh\tr0, [r6, r5]\n \tmovs\tr2, r4\n \tldrh\tr6, [r4, r5]\n \tmovs\tr2, r4\n-\tldrh\tr0, [r5, r5]\n-\tmovs\tr2, r4\n-\tldrh\tr6, [r3, r5]\n-\tmovs\tr2, r4\n-\tldrh\tr0, [r2, r5]\n+\tldrh\tr0, [r3, r5]\n \tmovs\tr2, r4\n-\tldrh\tr6, [r0, r5]\n+\tldrh\tr6, [r1, r5]\n \tmovs\tr2, r4\n Read::checkRead() const:\n ./src/mira/read.C:465\n \tldr\tr2, [pc, #720]\t@ (1d4350 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3651c>)\n \tldr\tr3, [pc, #724]\t@ (1d4354 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x36520>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -931398,19 +931397,19 @@\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr2, [r2, #54]\t@ 0x36\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [r2, r7]\n+\tldr\tr6, [r3, r7]\n \tmovs\tr2, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldr\tr2, [r5, r6]\n+\tldr\tr2, [r6, r6]\n \tmovs\tr2, r4\n \tadd\tr5, pc, #920\t@ (adr r5, 1d4708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x368d4>)\n \tmovs\tr5, r5\n \tldrh\tr4, [r6, #48]\t@ 0x30\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -931422,17 +931421,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr1, #190\t@ 0xbe\n+\tcmp\tr1, #202\t@ 0xca\n \tmovs\tr1, r4\n-\tcmp\tr1, #188\t@ 0xbc\n+\tcmp\tr1, #200\t@ 0xc8\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -931751,25 +931750,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr4, [r6, r7]\n+\tstrb\tr4, [r7, r7]\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #472]\t@ 0x1d8\n+\tstr\tr6, [sp, #520]\t@ 0x208\n \tmovs\tr1, r4\n-\tstrb\tr4, [r7, r5]\n+\tstrb\tr4, [r0, r6]\n \tmovs\tr2, r4\n-\tstrb\tr6, [r4, r5]\n+\tstrb\tr6, [r5, r5]\n \tmovs\tr2, r4\n Read::dumpAsReadname(std::ostream&):\n ./src/mira/read.C:1234\n \tldr\tr2, [pc, #680]\t@ (1d48e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x36aac>)\n \tldr\tr3, [pc, #684]\t@ (1d48e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x36ab0>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -932106,31 +932105,31 @@\n \tmovs\tr0, r0\n \tldrh\tr0, [r3, #8]\n \tmovs\tr5, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tldrh\tr6, [r7, #4]\n \tmovs\tr5, r5\n-\tstrb\tr4, [r2, r0]\n+\tstrb\tr4, [r3, r0]\n \tmovs\tr2, r4\n-\tstrb\tr0, [r1, r0]\n+\tstrb\tr0, [r2, r0]\n \tmovs\tr2, r4\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr4, #40\t@ 0x28\n+\tmovs\tr4, #52\t@ 0x34\n \tmovs\tr1, r4\n-\tmovs\tr4, #38\t@ 0x26\n+\tmovs\tr4, #50\t@ 0x32\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -932865,59 +932864,59 @@\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr6, [r0, #48]\t@ 0x30\n \tmovs\tr5, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstr\tr2, [r0, r5]\n+\tstr\tr2, [r1, r5]\n \tmovs\tr2, r4\n \tstrh\tr0, [r2, #44]\t@ 0x2c\n \tmovs\tr5, r5\n-\tstr\tr0, [r2, r4]\n+\tstr\tr0, [r3, r4]\n \tmovs\tr2, r4\n-\tcmp\tr5, #106\t@ 0x6a\n+\tcmp\tr5, #114\t@ 0x72\n \tmovs\tr3, r4\n \tldr\tr4, [sp, #216]\t@ 0xd8\n \tmovs\tr5, r5\n-\tldr\tr7, [pc, #912]\t@ (1d52a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3746c>)\n+\tldr\tr7, [pc, #944]\t@ (1d52c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3748c>)\n \tmovs\tr2, r4\n-\tldr\tr7, [pc, #472]\t@ (1d50ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x372b8>)\n+\tldr\tr7, [pc, #504]\t@ (1d510c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x372d8>)\n \tmovs\tr2, r4\n-\tldr\tr7, [pc, #504]\t@ (1d5110 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x372dc>)\n+\tldr\tr7, [pc, #536]\t@ (1d5130 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x372fc>)\n \tmovs\tr2, r4\n-\tldr\tr7, [pc, #424]\t@ (1d50c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x37290>)\n+\tldr\tr7, [pc, #456]\t@ (1d50e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x372b0>)\n \tmovs\tr2, r4\n \tstrh\tr0, [r1, #30]\n \tmovs\tr5, r5\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr0, r3, #6\n+\tsubs\tr4, r4, #6\n \tmovs\tr1, r4\n-\tsubs\tr6, r2, #6\n+\tsubs\tr2, r4, #6\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr6, r3, #7\n+\tadds\tr2, r5, #7\n \tmovs\tr1, r4\n-\tadds\tr4, r3, #7\n+\tadds\tr0, r5, #7\n \tmovs\tr1, r4\n \tblx\tb310 \n \tblx\tb310 \n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [r4, #0]\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd\tr6, sp, #32\n@@ -933804,61 +933803,61 @@\n \tmovs\tr0, r0\n \tldrb\tr2, [r6, #29]\n \tmovs\tr5, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #552]\t@ (1d58a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x37a74>)\n+\tldr\tr1, [pc, #584]\t@ (1d58c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x37a94>)\n \tmovs\tr2, r4\n \tldrb\tr2, [r7, #19]\n \tmovs\tr5, r5\n-\tldr\tr1, [pc, #16]\t@ (1d5698 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x37864>)\n+\tldr\tr1, [pc, #48]\t@ (1d56b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x37884>)\n \tmovs\tr2, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr4, r6, r2\n+\tadds\tr0, r0, r3\n \tmovs\tr1, r4\n-\tadds\tr2, r6, r2\n+\tadds\tr6, r7, r2\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tbxns\tfp\n+\tbxns\tip\n \tmovs\tr2, r4\n-\tbx\tr7\n+\tbx\tr8\n \tmovs\tr2, r4\n-\tands\tr2, r3\n+\tands\tr6, r4\n \tmovs\tr1, r4\n-\tands\tr6, r1\n+\tands\tr2, r3\n \tmovs\tr1, r4\n-\tstr\tr6, [r3, #124]\t@ 0x7c\n+\tstr\tr6, [r4, #124]\t@ 0x7c\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tcmp\tlr, r8\n+\tcmp\tlr, r9\n \tmovs\tr2, r4\n-\tcmp\tr8, r5\n+\tcmp\tr8, r6\n \tmovs\tr2, r4\n-\tcmp\tr8, r4\n+\tcmp\tr8, r5\n \tmovs\tr2, r4\n-\tadd\tip, sl\n+\tadd\tip, fp\n \tmovs\tr2, r4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tfp, [pc, #640]\t@ 1d5960 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x37b2c>\n \tadd.w\tsl, sp, #96\t@ 0x60\n \tmov\tr0, sl\n \tadd.w\tr8, sp, #32\n \tblx\tbcc4 \n@@ -934180,29 +934179,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #17\n+\tasrs\tr0, r7, #17\n \tmovs\tr1, r4\n-\tasrs\tr2, r5, #17\n+\tasrs\tr6, r6, #17\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr4, #98\t@ 0x62\n+\tsubs\tr4, #110\t@ 0x6e\n \tmovs\tr1, r4\n-\tsubs\tr4, #86\t@ 0x56\n+\tsubs\tr4, #98\t@ 0x62\n \tmovs\tr1, r4\n-\tstr\tr6, [r4, #64]\t@ 0x40\n+\tstr\tr6, [r5, #64]\t@ 0x40\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #96\t@ 0x60\n /usr/include/c++/10/ostream:391\n \tldr.w\tfp, [pc, #624]\t@ 1d5c10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x37ddc>\n@@ -934533,19 +934532,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr2, #236\t@ 0xec\n+\tsubs\tr2, #248\t@ 0xf8\n \tmovs\tr1, r4\n-\tsubs\tr2, #224\t@ 0xe0\n+\tsubs\tr2, #236\t@ 0xec\n \tmovs\tr1, r4\n-\tstr\tr0, [r6, #40]\t@ 0x28\n+\tstr\tr0, [r7, #40]\t@ 0x28\n \tmovs\tr3, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -935278,21 +935277,21 @@\n \tnop\n \tstrb\tr0, [r2, #12]\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr4, [r0, #12]\n \tmovs\tr5, r5\n-\tsubs\tr7, #110\t@ 0x6e\n+\tsubs\tr7, #118\t@ 0x76\n \tmovs\tr2, r4\n-\tsubs\tr7, #112\t@ 0x70\n+\tsubs\tr7, #120\t@ 0x78\n \tmovs\tr2, r4\n-\tldr\tr6, [pc, #480]\t@ (1d63cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x38598>)\n+\tldr\tr6, [pc, #512]\t@ (1d63ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x385b8>)\n \tmovs\tr3, r4\n-\tsubs\tr6, #124\t@ 0x7c\n+\tsubs\tr6, #132\t@ 0x84\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #18\n \tmovs\tr0, r0\n@@ -935306,41 +935305,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr5, #18\n+\tsubs\tr5, #26\n \tmovs\tr2, r4\n-\tsubs\tr4, #160\t@ 0xa0\n+\tsubs\tr4, #168\t@ 0xa8\n \tmovs\tr2, r4\n-\tsubs\tr4, #164\t@ 0xa4\n+\tsubs\tr4, #172\t@ 0xac\n \tmovs\tr2, r4\n-\tadds\tr1, #200\t@ 0xc8\n+\tadds\tr1, #208\t@ 0xd0\n \tmovs\tr2, r4\n-\tldr\tr3, [pc, #1000]\t@ (1d6614 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x387e0>)\n+\tldr\tr4, [pc, #8]\t@ (1d6234 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x38400>)\n \tmovs\tr3, r4\n-\tsubs\tr4, #0\n+\tsubs\tr4, #8\n \tmovs\tr2, r4\n-\tsubs\tr4, #2\n+\tsubs\tr4, #10\n \tmovs\tr2, r4\n-\tsubs\tr3, #254\t@ 0xfe\n+\tsubs\tr4, #6\n \tmovs\tr2, r4\n-\tlsls\tr0, r3, #21\n+\tlsls\tr0, r4, #21\n \tmovs\tr4, r4\n-\tsubs\tr3, #94\t@ 0x5e\n+\tsubs\tr3, #102\t@ 0x66\n \tmovs\tr2, r4\n-\tsubs\tr3, #78\t@ 0x4e\n+\tsubs\tr3, #86\t@ 0x56\n \tmovs\tr2, r4\n-\tsubs\tr3, #94\t@ 0x5e\n+\tsubs\tr3, #102\t@ 0x66\n \tmovs\tr2, r4\n-\tldr\tr2, [pc, #656]\t@ (1d64dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x386a8>)\n+\tldr\tr2, [pc, #688]\t@ (1d64fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x386c8>)\n \tmovs\tr3, r4\n-\tsubs\tr2, #170\t@ 0xaa\n+\tsubs\tr2, #178\t@ 0xb2\n \tmovs\tr2, r4\n Read::changeBaseInComplementSequence(char, unsigned char, unsigned int):\n ./src/mira/read.C:4635\n \tldr.w\tip, [pc, #52]\t@ 1d6288 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x38454>\n ./src/mira/read.C:4640\n \tmvns\tr3, r3\n ./src/mira/read.C:4635\n@@ -935605,17 +935604,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr0, #240\t@ 0xf0\n+\tsubs\tr0, #248\t@ 0xf8\n \tmovs\tr2, r4\n-\tsubs\tr0, #232\t@ 0xe8\n+\tsubs\tr0, #240\t@ 0xf0\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::changeBaseInClippedComplementSequence(char, unsigned char, unsigned int):\n ./src/mira/read.C:4793\n@@ -935869,17 +935868,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr6, #246\t@ 0xf6\n+\tadds\tr6, #254\t@ 0xfe\n \tmovs\tr2, r4\n-\tadds\tr7, #74\t@ 0x4a\n+\tadds\tr7, #82\t@ 0x52\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::changeAdjustment(unsigned int, int):\n ./src/mira/read.C:4655\n@@ -936362,29 +936361,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr5, #192\t@ 0xc0\n+\tadds\tr5, #200\t@ 0xc8\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr5, #44\t@ 0x2c\n+\tadds\tr5, #52\t@ 0x34\n \tmovs\tr2, r4\n-\tadds\tr4, #190\t@ 0xbe\n+\tadds\tr4, #198\t@ 0xc6\n \tmovs\tr2, r4\n-\tadds\tr4, #98\t@ 0x62\n+\tadds\tr4, #106\t@ 0x6a\n \tmovs\tr2, r4\n-\tadds\tr4, #122\t@ 0x7a\n+\tadds\tr4, #130\t@ 0x82\n \tmovs\tr2, r4\n-\tadds\tr3, #146\t@ 0x92\n+\tadds\tr3, #154\t@ 0x9a\n \tmovs\tr2, r4\n /usr/include/c++/10/ostream:609\n \tldr\tr4, [sp, #32]\n \tldr.w\tr0, [r4, #-12]\n \tadd\tr0, r9\n /usr/include/c++/10/bits/ios_base.h:170\n \tldr\tr1, [r0, #20]\n@@ -937063,27 +937062,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr1, #164\t@ 0xa4\n+\tadds\tr1, #172\t@ 0xac\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr1, #26\n+\tadds\tr1, #34\t@ 0x22\n \tmovs\tr2, r4\n-\tadds\tr0, #174\t@ 0xae\n+\tadds\tr0, #182\t@ 0xb6\n \tmovs\tr2, r4\n-\tadds\tr0, #48\t@ 0x30\n+\tadds\tr0, #56\t@ 0x38\n \tmovs\tr2, r4\n-\tcmp\tr7, #184\t@ 0xb8\n+\tcmp\tr7, #192\t@ 0xc0\n \tmovs\tr2, r4\n Read::setLQClipoff(int):\n ./src/mira/read.C:5801\n \tldr\tr2, [pc, #788]\t@ (1d72b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x39484>)\n \tldr\tr3, [pc, #792]\t@ (1d72bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x39488>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -937500,23 +937499,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr5, #168\t@ 0xa8\n+\tcmp\tr5, #176\t@ 0xb0\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr4, #198\t@ 0xc6\n+\tcmp\tr4, #206\t@ 0xce\n \tmovs\tr2, r4\n-\tcmp\tr4, #178\t@ 0xb2\n+\tcmp\tr4, #186\t@ 0xba\n \tmovs\tr2, r4\n Read::setRQClipoff(int):\n ./src/mira/read.C:5823\n \tldr\tr2, [pc, #788]\t@ (1d7608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x397d4>)\n \tldr\tr3, [pc, #792]\t@ (1d760c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x397d8>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -937933,24 +937932,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr2, #128\t@ 0x80\n+\tcmp\tr2, #136\t@ 0x88\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr1, #130\t@ 0x82\n-\tmovs\tr2, r4\n \tcmp\tr1, #138\t@ 0x8a\n \tmovs\tr2, r4\n+\tcmp\tr1, #146\t@ 0x92\n+\tmovs\tr2, r4\n Read::setLSClipoff(int):\n ./src/mira/read.C:5846\n \tldr\tr2, [pc, #788]\t@ (1d7958 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x39b24>)\n \tldr\tr3, [pc, #792]\t@ (1d795c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x39b28>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr7, [pc, #788]\t@ (1d7960 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x39b2c>)\n@@ -938366,23 +938365,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr7, #88\t@ 0x58\n+\tmovs\tr7, #96\t@ 0x60\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr6, #38\t@ 0x26\n+\tmovs\tr6, #46\t@ 0x2e\n \tmovs\tr2, r4\n-\tmovs\tr6, #98\t@ 0x62\n+\tmovs\tr6, #106\t@ 0x6a\n \tmovs\tr2, r4\n Read::setRSClipoff(int):\n ./src/mira/read.C:5868\n \tldr\tr2, [pc, #788]\t@ (1d7ca8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x39e74>)\n \tldr\tr3, [pc, #792]\t@ (1d7cac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x39e78>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -938799,23 +938798,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr4, #48\t@ 0x30\n+\tmovs\tr4, #56\t@ 0x38\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr2, #226\t@ 0xe2\n+\tmovs\tr2, #234\t@ 0xea\n \tmovs\tr2, r4\n-\tmovs\tr3, #58\t@ 0x3a\n+\tmovs\tr3, #66\t@ 0x42\n \tmovs\tr2, r4\n Read::setLMClipoff(int):\n ./src/mira/read.C:5892\n \tldr\tr2, [pc, #788]\t@ (1d7ff8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3a1c4>)\n \tldr\tr3, [pc, #792]\t@ (1d7ffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3a1c8>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -939231,23 +939230,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr1, #6\n+\tmovs\tr1, #14\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr4, r0, #6\n+\tsubs\tr4, r1, #6\n \tmovs\tr2, r4\n-\tmovs\tr0, #16\n+\tmovs\tr0, #24\n \tmovs\tr2, r4\n Read::setRMClipoff(int):\n ./src/mira/read.C:5907\n \tldr\tr2, [pc, #788]\t@ (1d8348 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3a514>)\n \tldr\tr3, [pc, #792]\t@ (1d834c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3a518>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -939663,23 +939662,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr4, r3, #7\n+\tadds\tr4, r4, #7\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr6, r7, #0\n+\tadds\tr6, r0, #1\n \tmovs\tr2, r4\n-\tadds\tr6, r4, #3\n+\tadds\tr6, r5, #3\n \tmovs\tr2, r4\n Read::setSequenceFromString(char const*, int):\n ./src/mira/read.C:2575\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r0\n \tldr\tr0, [pc, #1008]\t@ (1d8778 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3a944>)\n \tldr\tr3, [pc, #1008]\t@ (1d877c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3a948>)\n@@ -940201,21 +940200,21 @@\n \tmovs\tr0, r0\n \tldr\tr3, [pc, #808]\t@ (1d8aac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ac78>)\n \tmovs\tr5, r5\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tldr\tr2, [pc, #288]\t@ (1d88ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3aa78>)\n \tmovs\tr5, r5\n-\tsubs\tr6, r5, r0\n+\tsubs\tr6, r6, r0\n \tmovs\tr2, r4\n-\tsubs\tr6, r4, r0\n+\tsubs\tr6, r5, r0\n \tmovs\tr2, r4\n-\tsubs\tr0, r4, r0\n+\tsubs\tr0, r5, r0\n \tmovs\tr2, r4\n-\tsubs\tr6, r5, r0\n+\tsubs\tr6, r6, r0\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -940223,15 +940222,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr6, r2, r4\n+\tadds\tr6, r3, r4\n \tmovs\tr2, r4\n Read::initialiseRead(bool, bool, bool, ReadGroupLib::ReadGroupID, std::vector >&, std::vector >&, std::vector >&, std::vector >&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, int, int, int, int, int, int):\n ./src/mira/read.C:3251\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tmov\tr4, r0\n \tsub\tsp, #252\t@ 0xfc\n@@ -941169,39 +941168,39 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr6, r0, #19\n+\tasrs\tr6, r1, #19\n \tmovs\tr2, r4\n-\tasrs\tr2, r5, #18\n+\tasrs\tr2, r6, #18\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr0, r1, #16\n+\tasrs\tr0, r2, #16\n \tmovs\tr2, r4\n-\tasrs\tr4, r0, #16\n+\tasrs\tr4, r1, #16\n \tmovs\tr2, r4\n-\tasrs\tr4, r0, #16\n+\tasrs\tr4, r1, #16\n \tmovs\tr2, r4\n-\tasrs\tr0, r2, #13\n+\tasrs\tr0, r3, #13\n \tmovs\tr2, r4\n-\tasrs\tr4, r2, #14\n+\tasrs\tr4, r3, #14\n \tmovs\tr2, r4\n-\tasrs\tr2, r3, #13\n+\tasrs\tr2, r4, #13\n \tmovs\tr2, r4\n-\tasrs\tr2, r3, #13\n+\tasrs\tr2, r4, #13\n \tmovs\tr2, r4\n-\tasrs\tr6, r4, #10\n+\tasrs\tr6, r5, #10\n \tmovs\tr2, r4\n-\tasrs\tr0, r7, #8\n+\tasrs\tr0, r0, #9\n \tmovs\tr2, r4\n Read::helper_refreshPaddedSequence() const:\n ./src/mira/read.C:4063\n \tldr\tr2, [pc, #920]\t@ (1d92e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3b4b4>)\n \tldr\tr3, [pc, #924]\t@ (1d92ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3b4b8>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -941682,29 +941681,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr6, r2, #1\n+\tasrs\tr6, r3, #1\n \tmovs\tr2, r4\n-\tasrs\tr6, r2, #1\n+\tasrs\tr6, r3, #1\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldrsb\tr6, [r7, r0]\n \tmovs\tr5, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr2, r3, #31\n+\tlsrs\tr2, r4, #31\n \tmovs\tr2, r4\n-\tlsrs\tr0, r4, #27\n+\tlsrs\tr0, r5, #27\n \tmovs\tr2, r4\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr\tr1, [sp, #16]\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n@@ -943085,37 +943084,37 @@\n \tmovs\tr5, r5\n \tsubs\tr3, #244\t@ 0xf4\n \tmovs\tr5, r5\n \tldrh\tr2, [r5, #4]\n \tmovs\tr5, r5\n \tadds\tr5, #202\t@ 0xca\n \tmovs\tr5, r5\n-\tlsls\tr6, r0, #26\n+\tlsls\tr6, r1, #26\n \tmovs\tr2, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr6, r5, #26\n+\tlsls\tr6, r6, #26\n \tmovs\tr2, r4\n-\tlsls\tr4, r4, #24\n+\tlsls\tr4, r5, #24\n \tmovs\tr2, r4\n-\tlsls\tr2, r5, #25\n+\tlsls\tr2, r6, #25\n \tmovs\tr2, r4\n-\tlsls\tr0, r0, #23\n+\tlsls\tr0, r1, #23\n \tmovs\tr2, r4\n-\tlsls\tr2, r1, #1\n+\tlsls\tr2, r2, #1\n \tmovs\tr2, r4\n-\tlsls\tr6, r0, #1\n+\tlsls\tr6, r1, #1\n \tmovs\tr2, r4\n-\tldmia\tr1!, {r5, r7}\n+\tldmia\tr1!, {r3, r5, r7}\n \tmovs\tr3, r4\n-\tlsls\tr6, r3, #20\n+\tlsls\tr6, r4, #20\n \tmovs\tr2, r4\n-\tblx\tpc\n+\tldr\tr0, [pc, #16]\t@ (1d9d3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3bf08>)\n \tmovs\tr1, r4\n Read::dumpAsFASTA(std::ostream&, bool, bool, bool):\n ./src/mira/read.C:1265\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n \tldr.w\tr2, [pc, #1780]\t@ 1da428 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3c5f4>\n \tsub\tsp, #292\t@ 0x124\n@@ -943986,52 +943985,52 @@\n \tmovs\tr5, r5\n \tadds\tr2, #30\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldc2\t0, cr0, [lr, #-132]!\t@ 0xffffff7c\n \tstc2l\t0, cr0, [r6, #-132]\t@ 0xffffff7c\n-\tlsls\tr0, r5, #15\n+\tstc2l\t0, cr0, [lr, #-132]\t@ 0xffffff7c\n+\tlsls\tr0, r6, #15\n \tmovs\tr2, r4\n \tadds\tr1, #138\t@ 0x8a\n \tmovs\tr5, r5\n-\tldc2l\t0, cr0, [sl], #132\t@ 0x84\n+\tstc2\t0, cr0, [r2, #-132]\t@ 0xffffff7c\n \tadds\tr1, #72\t@ 0x48\n \tmovs\tr5, r5\n-\tlsls\tr0, r0, #14\n+\tlsls\tr0, r1, #14\n \tmovs\tr2, r4\n-\tbls.n\t1da4e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3c6ac>\n+\tbls.n\t1da4f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3c6bc>\n \tmovs\tr2, r4\n \tlsrs\tr4, r0, #10\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #552]\t@ 0x228\n+\tldr\tr5, [sp, #584]\t@ 0x248\n \tmovs\tr4, r4\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tmov\tip, r5\n \tmovs\tr5, r5\n-\tadds\tr6, #58\t@ 0x3a\n+\tadds\tr6, #66\t@ 0x42\n \tmovs\tr1, r5\n-\tb.n\t1da8e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3caac>\n+\tb.n\t1da8f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3cabc>\n \tmovs\tr3, r4\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr2, {r1, r2, r4, r5}\n+\tldmia\tr2!, {r1, r6}\n \tmovs\tr0, r4\n-\tldmia\tr2, {r2, r4, r5}\n+\tldmia\tr2!, {r6}\n \tmovs\tr0, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -945049,57 +945048,57 @@\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr1, #170\t@ 0xaa\n \tmovs\tr5, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf4d00021\n-\t\t\t@ instruction: 0xfb9c0021\n-\t\t\t@ instruction: 0xfb7a0021\n+\t\t\t@ instruction: 0xf4d80021\n+\t\t\t@ instruction: 0xfba40021\n+\t\t\t@ instruction: 0xfb820021\n \tcmp\tr1, #28\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xfb4c0021\n+\t\t\t@ instruction: 0xfb540021\n \tcmp\tr0, #214\t@ 0xd6\n \tmovs\tr5, r5\n-\t\t\t@ instruction: 0xfb0e0021\n-\t\t\t@ instruction: 0xfaba0021\n+\tsmlatb\tr0, r6, r1, r0\n+\t\t\t@ instruction: 0xfac20021\n \tlsrs\tr4, r0, #10\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #80]\t@ 0x50\n+\tstr\tr5, [sp, #112]\t@ 0x70\n \tmovs\tr4, r4\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tbge.n\t1daddc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3cfa8>\n+\tbge.n\t1dadec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3cfb8>\n \tmovs\tr3, r4\n-\tcmp\tr5, #228\t@ 0xe4\n+\tcmp\tr5, #236\t@ 0xec\n \tmovs\tr1, r5\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r2, r5, r7}\n+\tstmia\tr0!, {r4, r5, r7}\n \tmovs\tr0, r4\n-\tstmia\tr0!, {r1, r5, r7}\n+\tstmia\tr0!, {r1, r2, r3, r5, r7}\n \tmovs\tr0, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr2, #224\t@ 0xe0\n+\tcmp\tr2, #232\t@ 0xe8\n \tmovs\tr1, r5\n-\tbvc.n\t1dadec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3cfb8>\n+\tbvc.n\t1dadfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3cfc8>\n \tmovs\tr3, r4\n ./src/mira/read.C:1396 (discriminator 1)\n \tcmp\tr7, r1\n \tbge.w\t1daece , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3d09a>\n ./src/mira/read.C:1397\n \tldr\tr2, [r4, #112]\t@ 0x70\n \tcmp\tr2, r7\n@@ -946495,19 +946494,19 @@\n ./src/mira/../../src/mira/stringcontainer.H:116\n \tmov\tr0, r7\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t1db838 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3da04>\n \tb.n\t1db87e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3da4a>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tands.w\tr0, lr, #33\t@ 0x21\n+\tbic.w\tr0, r6, #33\t@ 0x21\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tcdp\t0, 3, cr0, cr10, cr1, {1}\n-\tpkhtb\tr0, r6, r1, asr #32\n+\tcdp\t0, 4, cr0, cr2, cr1, {1}\n+\tpkhtb\tr0, lr, r1, asr #32\n Read::dumpAsCAF(std::ostream&):\n ./src/mira/read.C:1522\n \tldr.w\tr2, [pc, #3624]\t@ 1dc6c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e894>\n \tldr.w\tr3, [pc, #3624]\t@ 1dc6cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e898>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tsl, [pc, #3620]\t@ 1dc6d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e89c>\n@@ -948155,120 +948154,120 @@\n \tb.n\t1dc128 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e2f4>\n \tasrs\tr4, r7, #26\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr2, r5, #26\n \tmovs\tr5, r5\n-\tstmdb\tr8, {r0, r5}\n+\tldmdb\tr0, {r0, r5}\n \tasrs\tr6, r2, #25\n \tmovs\tr5, r5\n-\tstrd\tr0, r0, [r0], #132\t@ 0x84\n-\tldmia.w\tip!, {r0, r5}\n-\tb.n\t1dc904 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ead0>\n+\tstrd\tr0, r0, [r8], #132\t@ 0x84\n+\t\t\t@ instruction: 0xe8c40021\n+\tb.n\t1dc914 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eae0>\n \tmovs\tr1, r4\n-\t\t\t@ instruction: 0xe8140021\n-\t\t\t@ instruction: 0xe80a0021\n-\tadd\tr3, sp, #168\t@ 0xa8\n+\t\t\t@ instruction: 0xe81c0021\n+\t\t\t@ instruction: 0xe8120021\n+\tadd\tr3, sp, #216\t@ 0xd8\n \tmovs\tr0, r4\n-\tb.n\t1dc630 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e7fc>\n+\tb.n\t1dc640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e80c>\n \tmovs\tr1, r4\n-\tb.n\t1dc5f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e7bc>\n+\tb.n\t1dc600 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e7cc>\n \tmovs\tr1, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #16\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #22\n \tmovs\tr0, r0\n-\tb.n\t1dc53c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e708>\n+\tb.n\t1dc54c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e718>\n \tmovs\tr1, r4\n-\tldmia\tr4!, {r1, r3}\n+\tldmia\tr4, {r1, r4}\n \tmovs\tr5, r4\n-\tldmia\tr3!, {r2, r5}\n+\tldmia\tr3, {r2, r3, r5}\n \tmovs\tr5, r4\n-\tb.n\t1dc054 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e220>\n+\tb.n\t1dc064 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e230>\n \tmovs\tr1, r4\n-\tb.n\t1dc080 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e24c>\n+\tb.n\t1dc090 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e25c>\n \tmovs\tr1, r4\n-\tb.n\t1dbf94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e160>\n+\tb.n\t1dbfa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e170>\n \tmovs\tr1, r4\n-\tb.n\t1dbf28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e0f4>\n+\tb.n\t1dbf38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e104>\n \tmovs\tr1, r4\n-\tb.n\t1dce24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eff0>\n+\tb.n\t1dce34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f000>\n \tmovs\tr1, r4\n-\tb.n\t1dce48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f014>\n+\tb.n\t1dce58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f024>\n \tmovs\tr1, r4\n-\tb.n\t1dcccc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ee98>\n+\tb.n\t1dccdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eea8>\n \tmovs\tr1, r4\n-\tb.n\t1dcc7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ee48>\n+\tb.n\t1dcc8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ee58>\n \tmovs\tr1, r4\n-\tb.n\t1dcc1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ede8>\n+\tb.n\t1dcc2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3edf8>\n \tmovs\tr1, r4\n-\tb.n\t1dcc00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3edcc>\n+\tb.n\t1dcc10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eddc>\n \tmovs\tr1, r4\n-\tb.n\t1dcb8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ed58>\n+\tb.n\t1dcb9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ed68>\n \tmovs\tr1, r4\n-\tb.n\t1dcb80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ed4c>\n+\tb.n\t1dcb90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ed5c>\n \tmovs\tr1, r4\n-\tb.n\t1dcaec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ecb8>\n+\tb.n\t1dcafc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ecc8>\n \tmovs\tr1, r4\n-\tb.n\t1dcaf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ecbc>\n+\tb.n\t1dcb00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eccc>\n \tmovs\tr1, r4\n-\tb.n\t1dc984 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb50>\n+\tb.n\t1dc994 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb60>\n \tmovs\tr1, r4\n-\tb.n\t1dca28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebf4>\n+\tb.n\t1dca38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec04>\n \tmovs\tr1, r4\n-\tb.n\t1dc8f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eac0>\n+\tb.n\t1dc904 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ead0>\n \tmovs\tr1, r4\n-\tb.n\t1dc99c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb68>\n+\tb.n\t1dc9ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb78>\n \tmovs\tr1, r4\n-\tstmia\tr6!, {r7}\n+\tstmia\tr6!, {r3, r7}\n \tmovs\tr5, r4\n-\tb.n\t1dc778 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e944>\n+\tb.n\t1dc788 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e954>\n \tmovs\tr1, r4\n-\tsvc\t102\t@ 0x66\n+\tsvc\t110\t@ 0x6e\n \tmovs\tr1, r4\n-\tbmi.n\t1dc6c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e88c>\n+\tbmi.n\t1dc6d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e89c>\n \tmovs\tr1, r4\n \tlsrs\tr6, r5, #10\n \tmovs\tr5, r5\n-\tadd\tr0, pc, #864\t@ (adr r0, 1dcad4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eca0>)\n+\tadd\tr0, pc, #912\t@ (adr r0, 1dcb04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ecd0>)\n \tmovs\tr0, r4\n-\tudf\t#74\t@ 0x4a\n+\tudf\t#82\t@ 0x52\n \tmovs\tr1, r4\n-\tbgt.n\t1dc6dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8a8>\n+\tbgt.n\t1dc6ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8b8>\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbgt.n\t1dc804 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e9d0>\n+\tbgt.n\t1dc814 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e9e0>\n \tmovs\tr1, r4\n-\tbpl.n\t1dc6fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8c8>\n+\tbpl.n\t1dc70c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8d8>\n \tmovs\tr1, r4\n-\tbpl.n\t1dc6d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8a0>\n+\tbpl.n\t1dc6e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8b0>\n \tmovs\tr1, r4\n-\tbpl.n\t1dc874 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ea40>\n+\tbpl.n\t1dc884 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ea50>\n \tmovs\tr1, r4\n-\tbpl.n\t1dc864 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ea30>\n+\tbpl.n\t1dc874 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ea40>\n \tmovs\tr1, r4\n-\tbpl.n\t1dc83c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ea08>\n+\tbpl.n\t1dc84c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ea18>\n \tmovs\tr1, r4\n-\tble.n\t1dc708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8d4>\n+\tble.n\t1dc718 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8e4>\n \tmovs\tr1, r4\n-\tble.n\t1dc6d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e89c>\n+\tble.n\t1dc6e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e8ac>\n \tmovs\tr1, r4\n-\tasrs\tr4, r1, #16\n+\tasrs\tr4, r2, #16\n \tmovs\tr1, r5\n-\tbgt.n\t1dc830 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e9fc>\n+\tbgt.n\t1dc840 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ea0c>\n \tmovs\tr1, r4\n-\tasrs\tr0, r3, #15\n+\tasrs\tr0, r4, #15\n \tmovs\tr1, r5\n-\tbgt.n\t1dc7d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e99c>\n+\tbgt.n\t1dc7e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3e9ac>\n \tmovs\tr1, r4\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #580]\t@ (1dc9fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebc8>)\n \tmovs\tr2, #6\n \tmov\tr0, r5\n \tadd\tr1, pc\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n@@ -948555,52 +948554,52 @@\n \tb.n\t1dc9d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eba0>\n \tb.n\t1dc9e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebb0>\n \tb.n\t1dc9d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eba0>\n \tb.n\t1dc9e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebb0>\n \tb.n\t1dc9d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eba0>\n \tb.n\t1dc9e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebb0>\n \tnop\n-\tbgt.n\t1dca5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec28>\n+\tbgt.n\t1dca6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec38>\n \tmovs\tr1, r4\n-\tasrs\tr0, r1, #10\n+\tasrs\tr0, r2, #10\n \tmovs\tr1, r5\n-\tbge.n\t1dc984 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb50>\n+\tbge.n\t1dc994 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb60>\n \tmovs\tr1, r4\n-\tasrs\tr2, r2, #9\n+\tasrs\tr2, r3, #9\n \tmovs\tr1, r5\n-\tbge.n\t1dc920 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eaec>\n+\tbge.n\t1dc930 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eafc>\n \tmovs\tr1, r4\n-\tbge.n\t1dca54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec20>\n+\tbge.n\t1dca64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec30>\n \tmovs\tr1, r4\n-\tblt.n\t1dc964 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb30>\n+\tblt.n\t1dc974 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb40>\n \tmovs\tr1, r4\n-\tbge.n\t1dca4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec18>\n+\tbge.n\t1dca5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec28>\n \tmovs\tr1, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tbge.n\t1dca10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebdc>\n+\tbge.n\t1dca20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebec>\n \tmovs\tr1, r4\n-\tbge.n\t1dc9dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eba8>\n+\tbge.n\t1dc9ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebb8>\n \tmovs\tr1, r4\n-\tasrs\tr6, r1, #19\n+\tasrs\tr2, r3, #19\n \tmovs\tr1, r4\n-\tbge.n\t1dc9b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb84>\n+\tbge.n\t1dc9c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eb94>\n \tmovs\tr1, r4\n-\tblt.n\t1dca34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec00>\n+\tblt.n\t1dca44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec10>\n \tmovs\tr1, r4\n-\tbhi.n\t1dc9d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3eba0>\n+\tbhi.n\t1dc9e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebb0>\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbge.n\t1dc9f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebbc>\n+\tbge.n\t1dca00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ebcc>\n \tmovs\tr1, r4\n-\t\t\t@ instruction: 0xf2760021\n-\tbhi.n\t1dca9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec68>\n+\t\t\t@ instruction: 0xf27e0021\n+\tbhi.n\t1dcaac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3ec78>\n \tmovs\tr1, r4\n Read::dumpAsMAF(std::ostream&):\n ./src/mira/read.C:1937\n \tldr.w\tr2, [pc, #2720]\t@ 1dd4f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f6bc>\n \tldr.w\tr3, [pc, #2720]\t@ 1dd4f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f6c0>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -949926,80 +949925,80 @@\n \tmovs\tr5, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr2, r7, #19\n \tmovs\tr5, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbls.n\t1dd404 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f5d0>\n+\tbls.n\t1dd414 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f5e0>\n \tmovs\tr1, r4\n \tlsls\tr6, r1, #18\n \tmovs\tr5, r5\n-\tbls.n\t1dd5b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f77c>\n+\tbls.n\t1dd5c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f78c>\n \tmovs\tr1, r4\n-\tldmia\tr7, {r1, r2, r4, r6, r7}\n+\tldmia\tr7, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr1, r4\n-\tbls.n\t1dd550 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f71c>\n+\tbls.n\t1dd560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f72c>\n \tmovs\tr1, r4\n-\tbls.n\t1dd528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f6f4>\n+\tbls.n\t1dd538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f704>\n \tmovs\tr1, r4\n \tlsls\tr2, r4, #16\n \tmovs\tr5, r5\n-\tbhi.n\t1dd4b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f680>\n+\tbhi.n\t1dd4c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f690>\n \tmovs\tr1, r4\n-\tbhi.n\t1dd460 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f62c>\n+\tbhi.n\t1dd470 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f63c>\n \tmovs\tr1, r4\n-\tbhi.n\t1dd5f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7c4>\n+\tbhi.n\t1dd608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7d4>\n \tmovs\tr1, r4\n-\tbvc.n\t1dd5b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f77c>\n+\tbvc.n\t1dd5c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f78c>\n \tmovs\tr1, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbpl.n\t1dd618 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7e4>\n+\tbpl.n\t1dd628 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7f4>\n \tmovs\tr1, r4\n \tvhadd.u32\td16, d14, d28\n-\tbmi.n\t1dd624 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7f0>\n+\tbmi.n\t1dd634 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f800>\n \tmovs\tr1, r4\n-\tbmi.n\t1dd5d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7a4>\n+\tbmi.n\t1dd5e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7b4>\n \tmovs\tr1, r4\n-\tbcc.n\t1dd61c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7e8>\n+\tbcc.n\t1dd62c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7f8>\n \tmovs\tr1, r4\n-\tbcs.n\t1dd540 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f70c>\n+\tbcc.n\t1dd550 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f71c>\n \tmovs\tr1, r4\n-\tbcs.n\t1dd4f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f6bc>\n+\tbcs.n\t1dd500 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f6cc>\n \tmovs\tr1, r4\n-\tbcs.n\t1dd49c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f668>\n+\tbcs.n\t1dd4ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f678>\n \tmovs\tr1, r4\n-\tbcs.n\t1dd45c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f628>\n+\tbcs.n\t1dd46c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f638>\n \tmovs\tr1, r4\n-\tbcs.n\t1dd610 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7dc>\n+\tbcs.n\t1dd620 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7ec>\n \tmovs\tr1, r4\n-\tbcs.n\t1dd5f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7c4>\n+\tbcs.n\t1dd608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f7d4>\n \tmovs\tr1, r4\n-\tbcs.n\t1dd5ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f778>\n+\tbcs.n\t1dd5bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f788>\n \tmovs\tr1, r4\n-\tbne.n\t1dd544 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f710>\n+\tbne.n\t1dd554 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f720>\n \tmovs\tr1, r4\n-\tbne.n\t1dd4f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f6c4>\n+\tbne.n\t1dd508 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f6d4>\n \tmovs\tr1, r4\n-\tbne.n\t1dd47c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f648>\n+\tbne.n\t1dd48c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3f658>\n \tmovs\tr1, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr0, [sp, #352]\t@ 0x160\n+\tldr\tr0, [sp, #400]\t@ 0x190\n \tmovs\tr0, r4\n-\tldr\tr0, [sp, #344]\t@ 0x158\n+\tldr\tr0, [sp, #392]\t@ 0x188\n \tmovs\tr0, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -950679,19 +950678,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr2, {r2, r3, r4, r6, r7}\n+\tldmia\tr2, {r2, r5, r6, r7}\n \tmovs\tr1, r4\n-\tldmia\tr2, {r1, r2, r4, r6, r7}\n+\tldmia\tr2, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr1, r4\n-\tldmia\tr2, {r2, r4, r5, r7}\n+\tldmia\tr2, {r2, r3, r4, r5, r7}\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::fixZeroGapQuals():\n ./src/mira/read.C:3406\n@@ -951181,15 +951180,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r2, r6, r7}\n+\tstmia\tr6!, {r2, r3, r6, r7}\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::transformGapsToNs():\n ./src/mira/read.C:3518\n@@ -951793,15 +951792,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r1, r2, r6, r7}\n+\tstmia\tr1!, {r1, r2, r3, r6, r7}\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getAdjustmentPosOfReadPos(unsigned int) const:\n ./src/mira/read.C:3574\n@@ -952078,22 +952077,22 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\titee\t\n+\titte\t\n \tmov\tr1, r4\n-\t\t\t@ instruction: 0xb69a\n+\t\t\t@ instruction: 0xb6a2\n \tmoval\tr1, r4\n-\tldrb\tr2, [r6, #31]\n+\tldrb\tr2, [r7, #31]\n \tmovs\tr3, r4\n-\tit\tge\n-\tmovge\tr1, r4\n+\tnop\t{11}\n+\tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getLowerNonGapAdjustmentPosOfReadPos(unsigned int) const:\n ./src/mira/read.C:3599\n \tldr.w\tr2, [pc, #1104]\t@ 1deab8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x40c84>\n@@ -952623,21 +952622,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbnz\tr6, 1deb34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x40d00>\n+\tcbnz\tr6, 1deb36 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x40d02>\n \tmovs\tr1, r4\n-\tcbz\tr6, 1deb22 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x40cee>\n+\tsxth\tr6, r0\n \tmovs\tr1, r4\n-\tldrb\tr6, [r2, #13]\n+\tldrb\tr6, [r3, #13]\n \tmovs\tr3, r4\n-\tcbnz\tr4, 1deb3a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x40d06>\n+\tcbnz\tr4, 1deb3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x40d08>\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getUpperNonGapAdjustmentPosOfReadPos(unsigned int) const:\n ./src/mira/read.C:3633\n@@ -953191,21 +953190,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb6b4\n+\t\t\t@ instruction: 0xb6bc\n \tmovs\tr1, r4\n-\tadd\tr5, sp, #368\t@ 0x170\n+\tadd\tr5, sp, #400\t@ 0x190\n \tmovs\tr1, r4\n-\tstrb\tr4, [r6, #26]\n+\tstrb\tr4, [r7, #26]\n \tmovs\tr3, r4\n-\t\t\t@ instruction: 0xb6ea\n+\t\t\t@ instruction: 0xb6f2\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getLowerNonGapPosOfReadPos(unsigned int) const:\n ./src/mira/read.C:3668\n@@ -953555,21 +953554,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #440\t@ 0x1b8\n+\tadd\tr2, sp, #472\t@ 0x1d8\n \tmovs\tr1, r4\n-\tpush\t{r1, r3, r7}\n+\tpush\t{r1, r4, r7}\n \tmovs\tr1, r4\n-\tcbnz\tr4, 1df2b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4147c>\n+\tcbnz\tr4, 1df2b2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4147e>\n \tmovs\tr2, r4\n-\tpush\t{r1, r3, r5, r6}\n+\tpush\t{r1, r4, r5, r6}\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getUpperNonGapPosOfReadPos(unsigned int) const:\n ./src/mira/read.C:3690\n@@ -953926,21 +953925,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr7, pc, #464\t@ (adr r7, 1df748 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x41914>)\n+\tadd\tr7, pc, #496\t@ (adr r7, 1df768 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x41934>)\n \tmovs\tr1, r4\n-\tcbz\tr0, 1df5a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4176c>\n+\tcbz\tr0, 1df5a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4176e>\n \tmovs\tr1, r4\n-\t\t\t@ instruction: 0xb6ca\n+\t\t\t@ instruction: 0xb6d2\n \tmovs\tr2, r4\n-\tcbz\tr4, 1df5b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4177c>\n+\tcbz\tr4, 1df5b2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4177e>\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getActualSequence() const:\n ./src/mira/../../src/mira/read.H:503\n@@ -954229,31 +954228,31 @@\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbls.n\t1df718 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x418e4>\n \tmovs\tr4, r5\n \tbls.n\t1df8a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x41a6c>\n \tmovs\tr4, r5\n-\tstmia\tr5!, {r1, r4, r5}\n+\tstmia\tr5!, {r1, r3, r4, r5}\n \tmovs\tr1, r4\n-\tstmia\tr5!, {r1, r3, r5}\n+\tstmia\tr5!, {r1, r4, r5}\n \tmovs\tr1, r4\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr6, [r7, #24]\n+\tstrh\tr6, [r0, #26]\n \tmovs\tr1, r4\n-\tadd\tr7, sp, #528\t@ 0x210\n+\tadd\tr7, sp, #560\t@ 0x230\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getSeqAsChar() const:\n ./src/mira/../../src/mira/read.H:503\n@@ -954278,15 +954277,15 @@\n \tbne.n\t1df810 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x419dc>\n \tldr\tr0, [pc, #8]\t@ (1df828 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x419f4>)\n \tadd\tr0, pc\n \tadds\tr0, #3\n ./src/mira/read.C:4891\n \tpop\t{r4, pc}\n \tnop\n-\tstmia\tr3!, {r4, r5}\n+\tstmia\tr3!, {r3, r4, r5}\n \tmovs\tr1, r4\n Read::getSeqAsString(std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/read.C:4922\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n ./src/mira/../../src/mira/read.H:503\n \tldrb.w\tr3, [r0, #153]\t@ 0x99\n@@ -954631,21 +954630,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr7, [sp, #336]\t@ 0x150\n+\tstr\tr7, [sp, #368]\t@ 0x170\n \tmovs\tr1, r4\n-\tadd\tr4, sp, #256\t@ 0x100\n+\tadd\tr4, sp, #288\t@ 0x120\n \tmovs\tr1, r4\n-\tcbz\tr2, 1dfaee , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x41cba>\n+\tcbz\tr2, 1dfaf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x41cbc>\n \tmovs\tr2, r4\n-\tadd\tr4, sp, #848\t@ 0x350\n+\tadd\tr4, sp, #880\t@ 0x370\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getBaseInClippedSequence(unsigned int) const:\n ./src/mira/read.C:5122\n@@ -954924,21 +954923,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #80]\t@ 0x50\n+\tstr\tr5, [sp, #112]\t@ 0x70\n \tmovs\tr1, r4\n-\tadd\tr1, sp, #1016\t@ 0x3f8\n+\tadd\tr2, sp, #24\n \tmovs\tr1, r4\n-\tadd\tr7, sp, #224\t@ 0xe0\n+\tadd\tr7, sp, #256\t@ 0x100\n \tmovs\tr2, r4\n-\tadd\tr2, sp, #752\t@ 0x2f0\n+\tadd\tr2, sp, #784\t@ 0x310\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getLowerBoundPosOfBaseRun(unsigned int, char, bool) const:\n ./src/mira/read.C:5201\n@@ -955450,21 +955449,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #96]\t@ 0x60\n+\tstr\tr1, [sp, #128]\t@ 0x80\n \tmovs\tr1, r4\n-\tadd\tr6, pc, #16\t@ (adr r6, 1e014c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42318>)\n+\tadd\tr6, pc, #48\t@ (adr r6, 1e016c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42338>)\n \tmovs\tr1, r4\n-\tadd\tr3, sp, #248\t@ 0xf8\n+\tadd\tr3, sp, #280\t@ 0x118\n \tmovs\tr2, r4\n-\tadd\tr6, pc, #976\t@ (adr r6, 1e0514 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x426e0>)\n+\tadd\tr6, pc, #1008\t@ (adr r6, 1e0534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42700>)\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getUpperBoundPosOfBaseRun(unsigned int, char, bool) const:\n ./src/mira/read.C:5231\n@@ -955983,21 +955982,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r3, #38]\t@ 0x26\n+\tldrh\tr4, [r4, #38]\t@ 0x26\n \tmovs\tr1, r4\n-\tadd\tr1, pc, #800\t@ (adr r1, 1e088c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42a58>)\n+\tadd\tr1, pc, #832\t@ (adr r1, 1e08ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42a78>)\n \tmovs\tr1, r4\n-\tadd\tr7, pc, #8\t@ (adr r7, 1e0578 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42744>)\n+\tadd\tr7, pc, #40\t@ (adr r7, 1e0598 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42764>)\n \tmovs\tr2, r4\n-\tadd\tr3, pc, #80\t@ (adr r3, 1e05c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42790>)\n+\tadd\tr3, pc, #112\t@ (adr r3, 1e05e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x427b0>)\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getLenOfGapRun(unsigned int) const:\n ./src/mira/read.C:5261\n@@ -956463,21 +956462,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r3, #4]\n+\tldrh\tr4, [r4, #4]\n \tmovs\tr1, r4\n-\tldr\tr5, [sp, #544]\t@ 0x220\n+\tldr\tr5, [sp, #576]\t@ 0x240\n \tmovs\tr1, r4\n-\tadd\tr2, pc, #776\t@ (adr r2, 1e0c90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42e5c>)\n+\tadd\tr2, pc, #808\t@ (adr r2, 1e0cb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x42e7c>)\n \tmovs\tr2, r4\n-\tldr\tr7, [sp, #192]\t@ 0xc0\n+\tldr\tr7, [sp, #224]\t@ 0xe0\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::transferSVTagsToClip(int, int):\n ./src/mira/read.C:5645\n@@ -957227,25 +957226,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #624]\t@ 0x270\n+\tldr\tr2, [sp, #656]\t@ 0x290\n \tmovs\tr1, r4\n-\tldr\tr2, [sp, #512]\t@ 0x200\n+\tldr\tr2, [sp, #544]\t@ 0x220\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #984]\t@ 0x3d8\n+\tldr\tr1, [sp, #1016]\t@ 0x3f8\n \tmovs\tr1, r4\n-\tldr\tr1, [sp, #600]\t@ 0x258\n+\tldr\tr1, [sp, #632]\t@ 0x278\n \tmovs\tr1, r4\n ./src/mira/read.C:5702\n \tcmp\tr9, r2\n \tbeq.n\t1e1032 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x431fe>\n \tsub.w\tr0, r9, r2\n \tmov\tr3, r2\n \tands.w\tr1, r0, #7\n@@ -957402,15 +957401,15 @@\n \tb.n\t1e106e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4323a>\n \tb.n\t1e108c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x43258>\n \tb.n\t1e1056 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x43222>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t1e107e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4324a>\n \tb.n\t1e1086 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x43252>\n \tnop\n-\tldrh\tr0, [r6, r7]\n+\tldrh\tr4, [r7, r7]\n \tmovs\tr0, r4\n Read::getPosOfWeakestBaseInRun(char, unsigned int&):\n ./src/mira/read.C:6615\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r0\n \tldr.w\tr3, [pc, #1324]\t@ 1e15e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x437b4>\n \tsub\tsp, #268\t@ 0x10c\n@@ -958104,21 +958103,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r3, #54]\t@ 0x36\n+\tstrh\tr4, [r4, #54]\t@ 0x36\n \tmovs\tr1, r4\n-\tstrh\tr6, [r2, #54]\t@ 0x36\n+\tstrh\tr6, [r3, #54]\t@ 0x36\n \tmovs\tr1, r4\n-\tstr\tr6, [sp, #144]\t@ 0x90\n+\tstr\tr6, [sp, #176]\t@ 0xb0\n \tmovs\tr2, r4\n-\tldmia\tr0!, {r1, r3, r6}\n+\tldmia\tr0!, {r1, r4, r6}\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::exchangeNsWithGaps():\n ./src/mira/read.C:6858\n@@ -958485,19 +958484,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr0, [r1, #21]\n+\tldrb\tr4, [r2, #21]\n \tmovs\tr0, r4\n-\tldrb\tr4, [r7, #20]\n+\tldrb\tr0, [r1, #21]\n \tmovs\tr0, r4\n-\tadd\tr5, pc, #48\t@ (adr r5, 1e1934 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x43b00>)\n+\tadd\tr5, pc, #80\t@ (adr r5, 1e1954 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x43b20>)\n \tmovs\tr2, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -959490,19 +959489,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpop\t{r3, r5, r6}\n+\tpop\t{r2, r4, r5, r6}\n \tmovs\tr0, r4\n-\tldrh\tr0, [r2, #10]\n+\tldrh\tr0, [r3, #10]\n \tmovs\tr1, r4\n-\tldrh\tr6, [r6, #8]\n+\tldrh\tr6, [r7, #8]\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::deRLERead():\n ./src/mira/read.C:878\n@@ -959956,19 +959955,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r2, #56]\t@ 0x38\n+\tstrh\tr4, [r3, #56]\t@ 0x38\n \tmovs\tr1, r4\n-\tadd\tr6, sp, #440\t@ 0x1b8\n+\tadd\tr6, sp, #472\t@ 0x1d8\n \tmovs\tr2, r4\n-\tstrh\tr4, [r4, #52]\t@ 0x34\n+\tstrh\tr4, [r5, #52]\t@ 0x34\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_iterator.h:979\n \tldr.w\tr6, [sl, #72]\t@ 0x48\n@@ -960986,25 +960985,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tuxtb\tr6, r2\n+\tuxtb\tr2, r4\n \tmovs\tr0, r4\n-\tldrb\tr6, [r4, #31]\n+\tldrb\tr6, [r5, #31]\n \tmovs\tr1, r4\n-\tldrb\tr6, [r0, #31]\n+\tldrb\tr6, [r1, #31]\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcbnz\tr6, 1e2b98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x44d64>\n+\tcbnz\tr2, 1e2b9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x44d68>\n \tmovs\tr0, r4\n Read::performHardTrim():\n ./src/mira/read.C:6446\n \tldr.w\tr2, [pc, #2536]\t@ 1e3550 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4571c>\n \tldr.w\tr3, [pc, #2536]\t@ 1e3554 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x45720>\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -962378,62 +962377,62 @@\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr3, pc, #920\t@ (adr r3, 1e38f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x45ac0>)\n \tmovs\tr4, r5\n \tadd\tr3, pc, #680\t@ (adr r3, 1e3808 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x459d4>)\n \tmovs\tr4, r5\n-\tvhadd.s32\td16, d10, d19\n-\tldrb\tr0, [r4, #19]\n+\tvhadd.s\td16, d2, d19\n+\tldrb\tr0, [r5, #19]\n \tmovs\tr1, r4\n-\tldrb\tr4, [r3, #15]\n+\tldrb\tr4, [r4, #15]\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldr\tr7, [sp, #400]\t@ 0x190\n \tmovs\tr4, r5\n-\tstrb\tr2, [r2, #31]\n+\tstrb\tr2, [r3, #31]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r1, #30]\n+\tstrb\tr0, [r2, #30]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r4, #30]\n+\tstrb\tr0, [r5, #30]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r5, #28]\n+\tstrb\tr2, [r6, #28]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r0, #27]\n+\tstrb\tr0, [r1, #27]\n \tmovs\tr1, r4\n-\tlsrs\tr0, r2, #8\n+\tlsrs\tr0, r3, #8\n \tmovs\tr4, r4\n-\tstrb\tr2, [r4, #26]\n+\tstrb\tr2, [r5, #26]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r5, #27]\n+\tstrb\tr2, [r6, #27]\n \tmovs\tr1, r4\n-\tstrb\tr4, [r0, #25]\n+\tstrb\tr4, [r1, #25]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r7, #26]\n+\tstrb\tr0, [r0, #27]\n \tmovs\tr1, r4\n-\tstrb\tr6, [r4, #23]\n+\tstrb\tr6, [r5, #23]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r2, #23]\n+\tstrb\tr2, [r3, #23]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r1, #22]\n+\tstrb\tr0, [r2, #22]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r4, #22]\n+\tstrb\tr0, [r5, #22]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r5, #20]\n+\tstrb\tr2, [r6, #20]\n \tmovs\tr1, r4\n-\tstrb\tr4, [r6, #21]\n+\tstrb\tr4, [r7, #21]\n \tmovs\tr1, r4\n-\tstrb\tr6, [r1, #19]\n+\tstrb\tr6, [r2, #19]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r0, #21]\n+\tstrb\tr2, [r1, #21]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r6, #17]\n+\tstrb\tr0, [r7, #17]\n \tmovs\tr1, r4\n Read::dumpAsBAF(std::ostream&):\n ./src/mira/read.C:1768\n \tldr.w\tr2, [pc, #2160]\t@ 1e3e38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x46004>\n \tldr.w\tr3, [pc, #2160]\t@ 1e3e3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x46008>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -963434,89 +963433,89 @@\n \t...\n \tldr\tr1, [sp, #592]\t@ 0x250\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr1, [sp, #504]\t@ 0x1f8\n \tmovs\tr4, r5\n-\tstrb\tr0, [r3, #17]\n+\tstrb\tr0, [r4, #17]\n \tmovs\tr1, r4\n-\tstrb\tr6, [r7, #16]\n+\tstrb\tr6, [r0, #17]\n \tmovs\tr1, r4\n-\tstrb\tr0, [r1, #12]\n+\tstrb\tr0, [r2, #12]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r0, #8]\n+\tstrb\tr2, [r1, #8]\n \tmovs\tr1, r4\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tstrb\tr4, [r4, #6]\n+\tstrb\tr4, [r5, #6]\n \tmovs\tr1, r4\n-\tstrb\tr2, [r7, #6]\n+\tstrb\tr2, [r0, #7]\n \tmovs\tr1, r4\n-\tstrb\tr6, [r1, #5]\n+\tstrb\tr6, [r2, #5]\n \tmovs\tr1, r4\n-\tstrb\tr4, [r6, #4]\n+\tstrb\tr4, [r7, #4]\n \tmovs\tr1, r4\n-\tldr\tr4, [pc, #488]\t@ (1e4054 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x46220>)\n+\tldr\tr4, [pc, #520]\t@ (1e4074 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x46240>)\n \tmovs\tr1, r4\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tstrb\tr6, [r1, #3]\n+\tstrb\tr6, [r2, #3]\n \tmovs\tr1, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr3, [pc, #184]\t@ (1e3f34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x46100>)\n+\tldr\tr3, [pc, #216]\t@ (1e3f54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x46120>)\n \tmovs\tr1, r4\n \tstr\tr4, [sp, #552]\t@ 0x228\n \tmovs\tr4, r5\n-\tcmp\tr2, #180\t@ 0xb4\n+\tcmp\tr2, #192\t@ 0xc0\n \tmovs\tr0, r4\n-\tldr\tr2, [r4, #0]\n+\tldr\tr2, [r5, #0]\n \tmovs\tr1, r4\n-\tldr\tr0, [r5, #108]\t@ 0x6c\n+\tldr\tr0, [r6, #108]\t@ 0x6c\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr6, [r6, #112]\t@ 0x70\n+\tldr\tr6, [r7, #112]\t@ 0x70\n \tmovs\tr1, r4\n-\tldr\tr6, [r0, #112]\t@ 0x70\n+\tldr\tr6, [r1, #112]\t@ 0x70\n \tmovs\tr1, r4\n-\tldr\tr2, [r3, #108]\t@ 0x6c\n+\tldr\tr2, [r4, #108]\t@ 0x6c\n \tmovs\tr1, r4\n-\tldr\tr2, [r2, #108]\t@ 0x6c\n+\tldr\tr2, [r3, #108]\t@ 0x6c\n \tmovs\tr1, r4\n-\tldr\tr1, [pc, #984]\t@ (1e4280 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4644c>)\n+\tldr\tr1, [pc, #1016]\t@ (1e42a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4646c>)\n \tmovs\tr1, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr7, #34\t@ 0x22\n+\tcmp\tr7, #46\t@ 0x2e\n \tmovs\tr0, r4\n-\tcmp\tr7, #30\n+\tcmp\tr7, #42\t@ 0x2a\n \tmovs\tr0, r4\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n-\tldrb\tr2, [r6, r7]\n+\tldrb\tr2, [r7, r7]\n \tmovs\tr1, r4\n-\tldrb\tr2, [r2, r7]\n+\tldrb\tr2, [r3, r7]\n \tmovs\tr1, r4\n-\tldrb\tr4, [r1, r7]\n+\tldrb\tr4, [r2, r7]\n \tmovs\tr1, r4\n-\tldrb\tr6, [r0, r7]\n+\tldrb\tr6, [r1, r7]\n \tmovs\tr1, r4\n-\tldrb\tr0, [r3, r6]\n+\tldrb\tr0, [r4, r6]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr4, [pc, #844]\t@ (1e4230 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x463fc>)\n \tadd.w\tr8, sp, #112\t@ 0x70\n \tmov\tr0, r8\n@@ -963950,49 +963949,49 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr4, #102\t@ 0x66\n+\tcmp\tr4, #114\t@ 0x72\n \tmovs\tr0, r4\n-\tcmp\tr4, #100\t@ 0x64\n+\tcmp\tr4, #112\t@ 0x70\n \tmovs\tr0, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr4, [r6, #24]\n+\tldr\tr4, [r7, #24]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstr\tr2, [r3, #40]\t@ 0x28\n+\tstr\tr2, [r4, #40]\t@ 0x28\n \tmovs\tr1, r4\n-\tldr\tr4, [r3, #28]\n+\tldr\tr4, [r4, #28]\n \tmovs\tr1, r4\n-\tldr\tr4, [sp, #472]\t@ 0x1d8\n+\tldr\tr4, [sp, #520]\t@ 0x208\n \tmovs\tr0, r4\n-\tldr\tr4, [r1, #28]\n+\tldr\tr4, [r2, #28]\n \tmovs\tr1, r4\n-\tstr\tr0, [r5, #40]\t@ 0x28\n+\tstr\tr0, [r6, #40]\t@ 0x28\n \tmovs\tr1, r4\n-\tldr\tr6, [r2, #12]\n+\tldr\tr6, [r3, #12]\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [r6, #8]\n+\tldr\tr2, [r7, #8]\n \tmovs\tr1, r4\n \tadd\tr5, pc, #352\t@ (adr r5, 1e43e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x465b4>)\n \tmovs\tr4, r5\n-\tldr\tr4, [r5, #0]\n+\tldr\tr4, [r6, #0]\n \tmovs\tr1, r4\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n /usr/include/c++/10/ostream:611\n \tblx\tb2d4 <__stack_chk_fail@plt>\n ./src/mira/read.C:1777 (discriminator 15)\n \tmov\tr0, r6\n@@ -965686,91 +965685,91 @@\n \tnop\n \tldrh\tr2, [r0, #32]\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r5, #30]\n \tmovs\tr4, r5\n-\tstr\tr4, [r7, #124]\t@ 0x7c\n+\tldr\tr4, [r0, #0]\n \tmovs\tr1, r4\n-\tstr\tr2, [r7, #120]\t@ 0x78\n+\tstr\tr2, [r0, #124]\t@ 0x7c\n \tmovs\tr1, r4\n-\tstr\tr0, [r7, #116]\t@ 0x74\n+\tstr\tr0, [r0, #120]\t@ 0x78\n \tmovs\tr1, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #22\n \tmovs\tr0, r0\n-\tstr\tr0, [r2, #108]\t@ 0x6c\n+\tstr\tr0, [r3, #108]\t@ 0x6c\n \tmovs\tr1, r4\n-\tstr\tr2, [r7, #104]\t@ 0x68\n+\tstr\tr2, [r0, #108]\t@ 0x6c\n \tmovs\tr1, r4\n-\tstr\tr4, [r7, #100]\t@ 0x64\n+\tstr\tr4, [r0, #104]\t@ 0x68\n \tmovs\tr1, r4\n-\tstr\tr0, [r1, #40]\t@ 0x28\n+\tstr\tr0, [r2, #40]\t@ 0x28\n \tmovs\tr3, r4\n-\tstr\tr7, [sp, #592]\t@ 0x250\n+\tstr\tr7, [sp, #624]\t@ 0x270\n \tmovs\tr1, r4\n-\tstr\tr2, [r0, #96]\t@ 0x60\n+\tstr\tr2, [r1, #96]\t@ 0x60\n \tmovs\tr1, r4\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tstr\tr0, [r4, #92]\t@ 0x5c\n+\tstr\tr0, [r5, #92]\t@ 0x5c\n \tmovs\tr1, r4\n-\tstr\tr6, [r5, #92]\t@ 0x5c\n+\tstr\tr6, [r6, #92]\t@ 0x5c\n \tmovs\tr1, r4\n-\tstrb\tr4, [r3, #18]\n+\tstrb\tr4, [r4, #18]\n \tmovs\tr1, r4\n-\tldr\tr0, [pc, #0]\t@ (1e506c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x47238>)\n+\tldr\tr0, [pc, #32]\t@ (1e508c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x47258>)\n \tmovs\tr2, r4\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tstrh\tr6, [r7, #62]\t@ 0x3e\n \tmovs\tr4, r5\n-\tstr\tr2, [r4, #64]\t@ 0x40\n+\tstr\tr2, [r5, #64]\t@ 0x40\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr0, [r3, #48]\t@ 0x30\n+\tstr\tr0, [r4, #48]\t@ 0x30\n \tmovs\tr1, r4\n-\tmov\tr6, r0\n+\tmov\tr6, r1\n \tmovs\tr2, r4\n-\tstr\tr4, [r2, #36]\t@ 0x24\n+\tstr\tr4, [r3, #36]\t@ 0x24\n \tmovs\tr1, r4\n-\tstr\tr4, [r1, #32]\n+\tstr\tr4, [r2, #32]\n \tmovs\tr1, r4\n-\tstr\tr0, [r6, #24]\n+\tstr\tr0, [r7, #24]\n \tmovs\tr1, r4\n-\tstr\tr0, [r5, #20]\n+\tstr\tr0, [r6, #20]\n \tmovs\tr1, r4\n-\tstr\tr4, [r4, #20]\n+\tstr\tr4, [r5, #20]\n \tmovs\tr1, r4\n-\tstr\tr6, [r1, #16]\n+\tstr\tr6, [r2, #16]\n \tmovs\tr1, r4\n-\tstr\tr4, [r4, #8]\n+\tstr\tr4, [r5, #8]\n \tmovs\tr1, r4\n-\tstr\tr2, [r2, #4]\n+\tstr\tr2, [r3, #4]\n \tmovs\tr1, r4\n-\tstr\tr0, [r0, #0]\n+\tstr\tr0, [r1, #0]\n \tmovs\tr1, r4\n-\tlsrs\tr2, r7, #3\n+\tlsrs\tr2, r0, #4\n \tmovs\tr2, r4\n-\tcmn\tr2, r0\n+\tcmn\tr2, r1\n \tmovs\tr2, r4\n-\tldrsh\tr6, [r0, r7]\n+\tldrsh\tr6, [r1, r7]\n \tmovs\tr1, r4\n-\tldrsh\tr0, [r3, r7]\n+\tldrsh\tr0, [r4, r7]\n \tmovs\tr1, r4\n-\tldrsh\tr6, [r7, r2]\n+\tldrsh\tr6, [r0, r3]\n \tmovs\tr1, r4\n-\tsbcs\tr0, r3\n+\tsbcs\tr0, r4\n \tmovs\tr2, r4\n-\tldrsh\tr2, [r4, r1]\n+\tldrsh\tr2, [r5, r1]\n \tmovs\tr1, r4\n-\tldrsh\tr2, [r6, r0]\n+\tldrsh\tr2, [r7, r0]\n \tmovs\tr1, r4\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr9, sp, #120\t@ 0x78\n \tmov.w\tsl, #0\n \tmov\tr0, r9\n \tmov.w\tfp, #0\n \tblx\tbcc4 \n@@ -966355,41 +966354,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr0, r7, r1\n+\tsubs\tr4, r0, r2\n \tmovs\tr0, r4\n-\tsubs\tr6, r6, r1\n+\tsubs\tr2, r0, r2\n \tmovs\tr0, r4\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr4, #186\t@ 0xba\n+\tsubs\tr4, #194\t@ 0xc2\n \tmovs\tr2, r4\n-\tadds\tr0, r5, r3\n+\tadds\tr4, r6, r3\n \tmovs\tr0, r4\n-\tadds\tr6, r4, r3\n+\tadds\tr2, r6, r3\n \tmovs\tr0, r4\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrsb\tr2, [r1, r1]\n+\tldrsb\tr2, [r2, r1]\n \tmovs\tr1, r4\n \tstr\tr2, [sp, #976]\t@ 0x3d0\n \tmovs\tr4, r5\n-\tldrsb\tr6, [r1, r3]\n+\tldrsb\tr6, [r2, r3]\n \tmovs\tr1, r4\n Read::helper_refreshPaddedComplementSequence() const:\n ./src/mira/read.C:4095\n \tldr\tr2, [pc, #920]\t@ (1e5918 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x47ae4>)\n \tldr\tr3, [pc, #924]\t@ (1e591c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x47ae8>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -966870,29 +966869,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #152]\t@ (1e59d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x47ba4>)\n+\tldr\tr2, [pc, #184]\t@ (1e59f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x47bc4>)\n \tmovs\tr1, r4\n-\tstrb\tr2, [r1, r6]\n+\tstrb\tr2, [r2, r6]\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tstr\tr0, [sp, #56]\t@ 0x38\n \tmovs\tr4, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr6, [r1, r4]\n+\tstrb\tr6, [r2, r4]\n \tmovs\tr1, r4\n-\tstrb\tr4, [r2, r0]\n+\tstrb\tr4, [r3, r0]\n \tmovs\tr1, r4\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr\tr1, [sp, #16]\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n@@ -968141,75 +968140,75 @@\n \tb.n\t1e622c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x483f8>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r1, #23]\n \tmovs\tr4, r5\n \tstrb\tr0, [r0, #23]\n \tmovs\tr4, r5\n-\tstrh\tr4, [r6, r0]\n+\tstrh\tr4, [r7, r0]\n \tmovs\tr1, r4\n-\tstrh\tr2, [r0, r2]\n+\tstrh\tr2, [r1, r2]\n \tmovs\tr1, r4\n-\tstr\tr4, [r1, r1]\n+\tstr\tr4, [r2, r1]\n \tmovs\tr2, r4\n-\tstr\tr4, [r6, r4]\n+\tstr\tr4, [r7, r4]\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tstmia\tr6!, {r1, r3, r4, r5, r6}\n \tmovs\tr4, r5\n \tstrb\tr4, [r1, #9]\n \tmovs\tr4, r5\n \tlsrs\tr0, r3, #18\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #440]\t@ (1e647c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48648>)\n+\tldr\tr6, [pc, #472]\t@ (1e649c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48668>)\n \tmovs\tr1, r4\n-\tsubs\tr5, #136\t@ 0x88\n+\tsubs\tr5, #144\t@ 0x90\n \tmovs\tr1, r4\n-\tsubs\tr5, #150\t@ 0x96\n+\tsubs\tr5, #158\t@ 0x9e\n \tmovs\tr1, r4\n-\tldr\tr4, [pc, #872]\t@ (1e6638 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48804>)\n+\tldr\tr4, [pc, #904]\t@ (1e6658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48824>)\n \tmovs\tr2, r4\n-\tldr\tr5, [pc, #776]\t@ (1e65dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x487a8>)\n+\tldr\tr5, [pc, #808]\t@ (1e65fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x487c8>)\n \tmovs\tr1, r4\n-\tsubs\tr4, #226\t@ 0xe2\n+\tsubs\tr4, #234\t@ 0xea\n \tmovs\tr1, r4\n-\tldr\tr5, [pc, #872]\t@ (1e6644 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48810>)\n+\tldr\tr5, [pc, #904]\t@ (1e6664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48830>)\n \tmovs\tr1, r4\n-\tldr\tr4, [pc, #224]\t@ (1e63c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4858c>)\n+\tldr\tr4, [pc, #256]\t@ (1e63e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x485ac>)\n \tmovs\tr2, r4\n-\tldr\tr5, [pc, #136]\t@ (1e636c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48538>)\n+\tldr\tr5, [pc, #168]\t@ (1e638c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48558>)\n \tmovs\tr1, r4\n-\tldr\tr5, [pc, #504]\t@ (1e64e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486ac>)\n+\tldr\tr5, [pc, #536]\t@ (1e6500 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486cc>)\n \tmovs\tr1, r4\n-\tldr\tr5, [pc, #520]\t@ (1e64f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486c0>)\n+\tldr\tr5, [pc, #552]\t@ (1e6514 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486e0>)\n \tmovs\tr1, r4\n-\tldr\tr3, [pc, #624]\t@ (1e6560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4872c>)\n+\tldr\tr3, [pc, #656]\t@ (1e6580 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4874c>)\n \tmovs\tr2, r4\n-\tldr\tr4, [pc, #536]\t@ (1e650c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486d8>)\n+\tldr\tr4, [pc, #568]\t@ (1e652c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486f8>)\n \tmovs\tr1, r4\n-\tldr\tr4, [pc, #120]\t@ (1e6370 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4853c>)\n+\tldr\tr4, [pc, #152]\t@ (1e6390 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4855c>)\n \tmovs\tr1, r4\n-\tldr\tr4, [pc, #304]\t@ (1e642c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x485f8>)\n+\tldr\tr4, [pc, #336]\t@ (1e644c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48618>)\n \tmovs\tr1, r4\n-\tldr\tr4, [pc, #528]\t@ (1e6510 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486dc>)\n+\tldr\tr4, [pc, #560]\t@ (1e6530 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x486fc>)\n \tmovs\tr1, r4\n-\tldr\tr2, [pc, #416]\t@ (1e64a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48670>)\n+\tldr\tr2, [pc, #448]\t@ (1e64c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48690>)\n \tmovs\tr2, r4\n-\tldr\tr3, [pc, #328]\t@ (1e6450 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4861c>)\n+\tldr\tr3, [pc, #360]\t@ (1e6470 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4863c>)\n \tmovs\tr1, r4\n-\tldr\tr3, [pc, #600]\t@ (1e6564 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48730>)\n+\tldr\tr3, [pc, #632]\t@ (1e6584 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48750>)\n \tmovs\tr1, r4\n-\tldr\tr3, [pc, #712]\t@ (1e65d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x487a4>)\n+\tldr\tr3, [pc, #744]\t@ (1e65f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x487c4>)\n \tmovs\tr1, r4\n-\tlsls\tr2, r1, #11\n+\tlsls\tr2, r2, #11\n \tmovs\tr3, r4\n-\tldr\tr2, [pc, #624]\t@ (1e6588 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48754>)\n+\tldr\tr2, [pc, #656]\t@ (1e65a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48774>)\n \tmovs\tr1, r4\n Read::insertBaseInSequence(char, unsigned char, unsigned int, bool):\n ./src/mira/read.C:4143\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r3\n \tldr.w\tr3, [pc, #2100]\t@ 1e6b54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48d20>\n \tsub\tsp, #248\t@ 0xf8\n@@ -969332,67 +969331,67 @@\n \tb.n\t1e6b32 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48cfe>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [r6, #64]\t@ 0x40\n \tmovs\tr4, r5\n \tldr\tr0, [r5, #64]\t@ 0x40\n \tmovs\tr4, r5\n-\tadds\tr7, #110\t@ 0x6e\n+\tadds\tr7, #118\t@ 0x76\n \tmovs\tr1, r4\n-\tldr\tr0, [pc, #976]\t@ (1e6f38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x49104>)\n+\tldr\tr0, [pc, #1008]\t@ (1e6f58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x49124>)\n \tmovs\tr1, r4\n-\tmov\tlr, r7\n+\tmov\tlr, r8\n \tmovs\tr2, r4\n-\tldr\tr0, [pc, #808]\t@ (1e6e98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x49064>)\n+\tldr\tr0, [pc, #840]\t@ (1e6eb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x49084>)\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tpop\t{r1, r2, r3, r5, r6, r7}\n \tmovs\tr4, r5\n \tldr\tr2, [r0, #12]\n \tmovs\tr4, r5\n \tlsrs\tr0, r3, #18\n \tmovs\tr0, r0\n-\tmov\tr0, r0\n+\tmov\tr0, r1\n \tmovs\tr1, r4\n-\tadds\tr3, #254\t@ 0xfe\n+\tadds\tr4, #6\n \tmovs\tr1, r4\n-\tmov\tr2, r2\n+\tmov\tr2, r3\n \tmovs\tr1, r4\n-\tmuls\tr4, r2\n+\tmuls\tr4, r3\n \tmovs\tr2, r4\n-\tcmp\tr2, ip\n+\tcmp\tr2, sp\n \tmovs\tr1, r4\n-\tadds\tr3, #100\t@ 0x64\n+\tadds\tr3, #108\t@ 0x6c\n \tmovs\tr1, r4\n-\tcmp\tr8, r3\n+\tcmp\tr8, r4\n \tmovs\tr1, r4\n-\tcmp\tr2, r7\n+\tcmn\tr2, r0\n \tmovs\tr2, r4\n-\tadd\tr8, r9\n+\tadd\tr8, sl\n \tmovs\tr1, r4\n-\tadd\tr4, fp\n+\tadd\tr4, ip\n \tmovs\tr1, r4\n-\tadds\tr2, #42\t@ 0x2a\n+\tadds\tr2, #50\t@ 0x32\n \tmovs\tr1, r4\n-\tbics\tr2, r3\n+\tbics\tr2, r4\n \tmovs\tr1, r4\n-\tadcs\tr6, r7\n+\tsbcs\tr6, r0\n \tmovs\tr2, r4\n-\tbics\tr4, r1\n+\tbics\tr4, r2\n \tmovs\tr1, r4\n-\tadds\tr1, #140\t@ 0x8c\n+\tadds\tr1, #148\t@ 0x94\n \tmovs\tr1, r4\n-\tmvns\tr4, r3\n+\tmvns\tr4, r4\n \tmovs\tr1, r4\n-\tlsrs\tr0, r4\n+\tlsrs\tr0, r5\n \tmovs\tr2, r4\n-\tcmn\tr6, r5\n+\tcmn\tr6, r6\n \tmovs\tr1, r4\n Read::insertBaseInClippedSequence(char, unsigned char, unsigned int, bool):\n ./src/mira/read.C:4677\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #420]\t@ (1e6d78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48f44>)\n \tldr\tr4, [pc, #424]\t@ (1e6d7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x48f48>)\n \tsub\tsp, #240\t@ 0xf0\n@@ -969625,17 +969624,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsbcs\tr2, r3\n+\tsbcs\tr2, r4\n \tmovs\tr1, r4\n-\tsbcs\tr2, r2\n+\tsbcs\tr2, r3\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::insertBaseInClippedComplementSequence(char, unsigned char, unsigned int, bool):\n ./src/mira/read.C:4723\n@@ -969886,17 +969885,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr7, #158\t@ 0x9e\n+\tsubs\tr7, #166\t@ 0xa6\n \tmovs\tr1, r4\n-\tands\tr6, r1\n+\tands\tr6, r2\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::deleteBaseFromComplementSequence(unsigned int):\n ./src/mira/read.C:4495\n@@ -970805,63 +970804,63 @@\n \tb.n\t1e75dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x497a8>\n \tldrsh\tr4, [r5, r6]\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsh\tr2, [r3, r6]\n \tmovs\tr4, r5\n-\tsubs\tr7, #14\n+\tsubs\tr7, #22\n \tmovs\tr1, r4\n-\tmovs\tr0, #212\t@ 0xd4\n+\tmovs\tr0, #220\t@ 0xdc\n \tmovs\tr1, r4\n-\tsubs\tr2, #130\t@ 0x82\n+\tsubs\tr2, #138\t@ 0x8a\n \tmovs\tr2, r4\n-\tsubs\tr6, #114\t@ 0x72\n+\tsubs\tr6, #122\t@ 0x7a\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldrb\tr0, [r2, r5]\n \tmovs\tr4, r5\n-\tsubs\tr4, #230\t@ 0xe6\n+\tsubs\tr4, #238\t@ 0xee\n \tmovs\tr1, r4\n-\tcmp\tr1, #4\n+\tcmp\tr1, #12\n \tmovs\tr1, r4\n-\tcmp\tr1, #20\n+\tcmp\tr1, #28\n \tmovs\tr1, r4\n-\tsubs\tr0, #90\t@ 0x5a\n+\tsubs\tr0, #98\t@ 0x62\n \tmovs\tr2, r4\n-\tsubs\tr4, #76\t@ 0x4c\n+\tsubs\tr4, #84\t@ 0x54\n \tmovs\tr1, r4\n-\tsubs\tr1, #162\t@ 0xa2\n+\tsubs\tr1, #170\t@ 0xaa\n \tmovs\tr1, r4\n-\tadds\tr6, r1, #6\n+\tadds\tr6, r2, #6\n \tmovs\tr1, r4\n-\tadds\tr7, #192\t@ 0xc0\n+\tadds\tr7, #200\t@ 0xc8\n \tmovs\tr2, r4\n-\tsubs\tr3, #178\t@ 0xb2\n+\tsubs\tr3, #186\t@ 0xba\n \tmovs\tr1, r4\n-\tsubs\tr3, #74\t@ 0x4a\n+\tsubs\tr3, #82\t@ 0x52\n \tmovs\tr1, r4\n-\tmovs\tr7, #78\t@ 0x4e\n+\tmovs\tr7, #86\t@ 0x56\n \tmovs\tr1, r4\n-\tsubs\tr3, #74\t@ 0x4a\n+\tsubs\tr3, #82\t@ 0x52\n \tmovs\tr1, r4\n-\tadds\tr6, #162\t@ 0xa2\n+\tadds\tr6, #170\t@ 0xaa\n \tmovs\tr2, r4\n-\tsubs\tr2, #148\t@ 0x94\n+\tsubs\tr2, #156\t@ 0x9c\n \tmovs\tr1, r4\n-\tsubs\tr2, #114\t@ 0x72\n+\tsubs\tr2, #122\t@ 0x7a\n \tmovs\tr1, r4\n-\tsubs\tr2, #118\t@ 0x76\n+\tsubs\tr2, #126\t@ 0x7e\n \tmovs\tr1, r4\n-\tadds\tr5, #234\t@ 0xea\n+\tadds\tr5, #242\t@ 0xf2\n \tmovs\tr2, r4\n-\tsubs\tr1, #220\t@ 0xdc\n+\tsubs\tr1, #228\t@ 0xe4\n \tmovs\tr1, r4\n Read::deleteBaseFromSequence(unsigned int):\n ./src/mira/read.C:4297\n \tldr.w\tr2, [pc, #1672]\t@ 1e7d14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x49ee0>\n \tldr.w\tr3, [pc, #1672]\t@ 1e7d18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x49ee4>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n@@ -971779,63 +971778,63 @@\n \tnop\n \tldr\tr0, [r2, r3]\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [r7, r2]\n \tmovs\tr4, r5\n-\tmovs\tr4, #236\t@ 0xec\n+\tmovs\tr4, #244\t@ 0xf4\n \tmovs\tr1, r4\n-\tcmp\tr7, #6\n+\tcmp\tr7, #14\n \tmovs\tr1, r4\n-\tadds\tr4, #62\t@ 0x3e\n+\tadds\tr4, #70\t@ 0x46\n \tmovs\tr2, r4\n-\tsubs\tr0, #186\t@ 0xba\n+\tsubs\tr0, #194\t@ 0xc2\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr3, #180\t@ 0xb4\n+\tmovs\tr3, #188\t@ 0xbc\n \tmovs\tr1, r4\n-\tsubs\tr0, #22\n+\tsubs\tr0, #30\n \tmovs\tr1, r4\n-\tadds\tr3, #4\n+\tadds\tr3, #12\n \tmovs\tr2, r4\n-\tadds\tr7, #128\t@ 0x80\n+\tadds\tr7, #136\t@ 0x88\n \tmovs\tr1, r4\n \tstrb\tr0, [r3, r7]\n \tmovs\tr4, r5\n-\tadds\tr5, #250\t@ 0xfa\n+\tadds\tr6, #2\n \tmovs\tr1, r4\n-\tmovs\tr1, #136\t@ 0x88\n+\tmovs\tr1, #144\t@ 0x90\n \tmovs\tr1, r4\n-\tasrs\tr4, r5, #26\n+\tasrs\tr4, r6, #26\n \tmovs\tr1, r4\n-\tadds\tr0, #222\t@ 0xde\n+\tadds\tr0, #230\t@ 0xe6\n \tmovs\tr2, r4\n-\tadds\tr5, #92\t@ 0x5c\n+\tadds\tr5, #100\t@ 0x64\n \tmovs\tr1, r4\n-\tadds\tr4, #242\t@ 0xf2\n+\tadds\tr4, #250\t@ 0xfa\n \tmovs\tr1, r4\n-\tmovs\tr0, #106\t@ 0x6a\n+\tmovs\tr0, #114\t@ 0x72\n \tmovs\tr1, r4\n-\tadds\tr4, #102\t@ 0x66\n+\tadds\tr4, #110\t@ 0x6e\n \tmovs\tr1, r4\n-\tcmp\tr7, #190\t@ 0xbe\n+\tcmp\tr7, #198\t@ 0xc6\n \tmovs\tr2, r4\n-\tadds\tr4, #60\t@ 0x3c\n+\tadds\tr4, #68\t@ 0x44\n \tmovs\tr1, r4\n-\tsubs\tr2, r1, #7\n+\tsubs\tr2, r2, #7\n \tmovs\tr1, r4\n-\tadds\tr4, #18\n+\tadds\tr4, #26\n \tmovs\tr1, r4\n-\tcmp\tr7, #30\n+\tcmp\tr7, #38\t@ 0x26\n \tmovs\tr2, r4\n-\tadds\tr3, #156\t@ 0x9c\n+\tadds\tr3, #164\t@ 0xa4\n \tmovs\tr1, r4\n Read::removeGapsFromRead():\n ./src/mira/read.C:3375\n \tldr\tr2, [pc, #488]\t@ (1e7f70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4a13c>)\n \tldr\tr3, [pc, #492]\t@ (1e7f74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4a140>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -972095,15 +972094,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr1, #170\t@ 0xaa\n+\tadds\tr1, #178\t@ 0xb2\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::correctNStretch(int, int, int):\n ./src/mira/read.C:3446\n@@ -973384,21 +973383,21 @@\n \tnop\n \tldr\tr7, [pc, #704]\t@ (1e8bd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4ada4>)\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr7, [pc, #656]\t@ (1e8bb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4ad7c>)\n \tmovs\tr4, r5\n-\tadds\tr0, #22\n+\tadds\tr0, #30\n \tmovs\tr1, r4\n-\tbcc.n\t1e8940 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4ab0c>\n+\tbcc.n\t1e8950 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4ab1c>\n \tmovs\tr1, r4\n-\tcmp\tr7, #244\t@ 0xf4\n+\tcmp\tr7, #252\t@ 0xfc\n \tmovs\tr1, r4\n-\tcmp\tr7, #84\t@ 0x54\n+\tcmp\tr7, #92\t@ 0x5c\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldr\tr5, [pc, #720]\t@ (1e8c0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4add8>)\n \tmovs\tr4, r5\n@@ -973408,43 +973407,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr4, #146\t@ 0x92\n+\tcmp\tr4, #154\t@ 0x9a\n \tmovs\tr1, r4\n-\tcmp\tr3, #130\t@ 0x82\n+\tcmp\tr3, #138\t@ 0x8a\n \tmovs\tr1, r4\n-\tcmp\tr3, #124\t@ 0x7c\n+\tcmp\tr3, #132\t@ 0x84\n \tmovs\tr1, r4\n-\tcmp\tr2, #246\t@ 0xf6\n+\tcmp\tr2, #254\t@ 0xfe\n \tmovs\tr1, r4\n-\tcmp\tr2, #252\t@ 0xfc\n+\tcmp\tr3, #4\n \tmovs\tr1, r4\n-\tmovs\tr0, #16\n+\tmovs\tr0, #24\n \tmovs\tr1, r4\n-\tmovs\tr5, #74\t@ 0x4a\n+\tmovs\tr5, #82\t@ 0x52\n \tmovs\tr2, r4\n-\tcmp\tr2, #88\t@ 0x58\n+\tcmp\tr2, #96\t@ 0x60\n \tmovs\tr1, r4\n-\tcmp\tr2, #112\t@ 0x70\n+\tcmp\tr2, #120\t@ 0x78\n \tmovs\tr1, r4\n-\tcmp\tr2, #86\t@ 0x56\n+\tcmp\tr2, #94\t@ 0x5e\n \tmovs\tr1, r4\n-\tcmp\tr1, #208\t@ 0xd0\n+\tcmp\tr1, #216\t@ 0xd8\n \tmovs\tr1, r4\n-\tcmp\tr1, #234\t@ 0xea\n+\tcmp\tr1, #242\t@ 0xf2\n \tmovs\tr1, r4\n-\tsubs\tr2, r5, #3\n+\tsubs\tr2, r6, #3\n \tmovs\tr1, r4\n-\tmovs\tr4, #36\t@ 0x24\n+\tmovs\tr4, #44\t@ 0x2c\n \tmovs\tr2, r4\n-\tcmp\tr1, #50\t@ 0x32\n+\tcmp\tr1, #58\t@ 0x3a\n \tmovs\tr1, r4\n Read::deleteBaseFromClippedSequence(unsigned int):\n ./src/mira/read.C:4701\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #412]\t@ (1e8b30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4acfc>)\n \tldr\tr2, [pc, #416]\t@ (1e8b34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4ad00>)\n \tsub\tsp, #240\t@ 0xf0\n@@ -973677,17 +973676,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr2, r6, #7\n+\tasrs\tr2, r7, #7\n \tmovs\tr1, r4\n-\tmovs\tr6, #130\t@ 0x82\n+\tmovs\tr6, #138\t@ 0x8a\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::deleteWeakestBaseInRun(char, unsigned int, bool):\n ./src/mira/read.C:6587\n@@ -973995,17 +973994,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr4, r3, #30\n+\tlsrs\tr4, r4, #30\n \tmovs\tr1, r4\n-\tmovs\tr4, #104\t@ 0x68\n+\tmovs\tr4, #112\t@ 0x70\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getActualComplementSequence() const:\n ./src/mira/../../src/mira/read.H:504\n@@ -974047,15 +974046,15 @@\n \tbne.n\t1e8dec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4afb8>\n \tldr\tr0, [pc, #8]\t@ (1e8e04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4afd0>)\n \tadd\tr0, pc\n \tadds\tr0, #3\n ./src/mira/read.C:4912\n \tpop\t{r4, pc}\n \tnop\n-\tcmp\tr5, #84\t@ 0x54\n+\tcmp\tr5, #92\t@ 0x5c\n \tmovs\tr1, r4\n Read::getClippedComplementSeqAsChar() const:\n ./src/mira/read.C:4949\n \tldr\tr2, [pc, #540]\t@ (1e9028 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4b1f4>)\n \tldr\tr3, [pc, #544]\t@ (1e902c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4b1f8>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -974325,28 +974324,28 @@\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadcs\tr6, r0\n \tmovs\tr4, r5\n \tasrs\tr0, r1\n \tmovs\tr4, r5\n-\tcmp\tr4, #210\t@ 0xd2\n+\tcmp\tr4, #218\t@ 0xda\n \tmovs\tr1, r4\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xeae60020\n-\tmovs\tr2, #16\n+\t\t\t@ instruction: 0xeaee0020\n+\tmovs\tr2, #24\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getComplementSeqIteratorBegin() const:\n ./src/mira/../../src/mira/read.H:504\n@@ -974651,16 +974650,16 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrd\tr0, r0, [r4], #-128\t@ 0x80\n-\tsubs\tr2, r2, #7\n+\tldrd\tr0, r0, [ip], #-128\t@ 0x80\n+\tsubs\tr2, r3, #7\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::getBaseInComplementSequence(unsigned int) const:\n ./src/mira/read.C:5135\n@@ -976104,22 +976103,22 @@\n \tmovs\tr0, r0\n \tsubs\tr0, #118\t@ 0x76\n \tmovs\tr4, r5\n \tadds\tr4, #212\t@ 0xd4\n \tmovs\tr4, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr6, r3, #28\n+\tasrs\tr6, r4, #28\n \tmovs\tr1, r4\n-\tldr??.w\tr0, [r0, pc, lsl #1]\n-\tldmia\tr0!, {r1, r4, r5, r6}\n+\tldr??.w\tr0, [ip, pc, lsl #1]\n+\tldmia\tr0!, {r1, r3, r4, r5, r6}\n \tmovs\tr2, r4\n-\tasrs\tr6, r4, #26\n+\tasrs\tr6, r5, #26\n \tmovs\tr1, r4\n-\tasrs\tr2, r5, #23\n+\tasrs\tr2, r6, #23\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ./src/mira/read.C:6199\n \tldrb.w\tr0, [r8, #-1]\n@@ -976952,33 +976951,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbvc.n\t1ea590 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4c75c>\n+\tbvc.n\t1ea5a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4c76c>\n \tmovs\tr0, r4\n-\tlsrs\tr4, r1, #30\n+\tlsrs\tr4, r2, #30\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbvs.n\t1ea740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4c90c>\n+\tbvs.n\t1ea750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4c91c>\n \tmovs\tr0, r4\n-\tlsrs\tr4, r3, #25\n+\tlsrs\tr4, r4, #25\n \tmovs\tr1, r4\n-\tlsrs\tr4, r3, #23\n+\tlsrs\tr4, r4, #23\n \tmovs\tr1, r4\n-\tlsrs\tr4, r3, #23\n+\tlsrs\tr4, r4, #23\n \tmovs\tr1, r4\n-\tlsls\tr2, r5, #27\n+\tlsls\tr2, r6, #27\n \tmovs\tr2, r4\n-\tlsrs\tr0, r7, #22\n+\tlsrs\tr0, r0, #23\n \tmovs\tr1, r4\n \tcmp\tr0, #78\t@ 0x4e\n \tbeq.w\t1e9b44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4bd10>\n \tcmp\tr0, #88\t@ 0x58\n \tbeq.w\t1e9b44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4bd10>\n \tb.w\t1e9ba8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4bd74>\n ./src/mira/read.C:6199\n@@ -978554,30 +978553,30 @@\n \tmovs\tr0, r0\n \tmovs\tr7, #248\t@ 0xf8\n \tmovs\tr4, r5\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr6, r0, #2\n+\tlsrs\tr6, r1, #2\n \tmovs\tr1, r4\n-\t\t\t@ instruction: 0xeab6001f\n-\tcbnz\tr6, 1eb378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4d544>\n+\t\t\t@ instruction: 0xeac2001f\n+\tcbnz\tr6, 1eb37a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4d546>\n \tmovs\tr2, r4\n-\tlsrs\tr6, r1, #32\n+\tlsrs\tr6, r2, #32\n \tmovs\tr1, r4\n-\tlsls\tr0, r5, #31\n+\tlsls\tr0, r6, #31\n \tmovs\tr1, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr3!, {r4, r5}\n+\tldmia\tr3, {r3, r4, r5}\n \tmovs\tr0, r4\n-\tlsls\tr6, r6, #14\n+\tlsls\tr6, r7, #14\n \tmovs\tr1, r4\n \tsubs\tr2, r6, #7\n \tmovs\tr4, r5\n \tcmp\tr0, #78\t@ 0x4e\n \tbeq.n\t1eb36a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4d536>\n \tcmp\tr0, #88\t@ 0x58\n \tbne.w\t1eaa3a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4cc06>\n@@ -979107,24 +979106,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr5!, {}\n+\tstmia\tr5!, {r3}\n \tmovs\tr0, r4\n-\tstc2\t0, cr0, [r8, #128]\t@ 0x80\n+\tldc2\t0, cr0, [r0, #128]\t@ 0x80\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r3, r6, r7}\n+\tstmia\tr3!, {r1, r4, r6, r7}\n \tmovs\tr0, r4\n-\tmrrc2\t0, 2, r0, r2, cr0\n+\tmrrc2\t0, 2, r0, sl, cr0\n \tcmp\tr0, #78\t@ 0x4e\n \tbeq.w\t1eb2b6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4d482>\n \tcmp\tr0, #88\t@ 0x58\n \tbeq.w\t1eb2b6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4d482>\n \tb.w\t1eaec0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4d08c>\n \tcmp\tr0, #78\t@ 0x4e\n \tbeq.w\t1eb282 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4d44e>\n@@ -980641,66 +980640,66 @@\n \t...\n \tasrs\tr0, r6, #17\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r4, #17\n \tmovs\tr4, r5\n-\tstr??.w\tr0, [r6, r0, lsl #2]\n-\tldrh.w\tr0, [r6, r0, lsl #2]\n+\tstr??.w\tr0, [lr, r0, lsl #2]\n+\tldrh.w\tr0, [lr, r0, lsl #2]\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf6f80020\n-\t\t\t@ instruction: 0xf6600020\n-\t\t\t@ instruction: 0xf65c0020\n-\t\t\t@ instruction: 0xf63e0020\n-\t\t\t@ instruction: 0xf62a0020\n-\t\t\t@ instruction: 0xf6240020\n-\t\t\t@ instruction: 0xf6140020\n-\t\t\t@ instruction: 0xf61a0020\n+\t\t\t@ instruction: 0xf7000020\n+\t\t\t@ instruction: 0xf6680020\n+\t\t\t@ instruction: 0xf6640020\n+\tmovw\tr0, #26656\t@ 0x6820\n+\t\t\t@ instruction: 0xf6320020\n+\t\t\t@ instruction: 0xf62c0020\n+\t\t\t@ instruction: 0xf61c0020\n+\t\t\t@ instruction: 0xf6220020\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tadcs.w\tr0, r2, #10485760\t@ 0xa00000\n+\tadcs.w\tr0, sl, #10485760\t@ 0xa00000\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tadds.w\tr0, ip, #10485760\t@ 0xa00000\n+\t\t\t@ instruction: 0xf5240020\n \tasrs\tr0, r1, #32\n \tmovs\tr4, r5\n-\tand.w\tr0, ip, #10485760\t@ 0xa00000\n-\t\t\t@ instruction: 0xf3420020\n-\t\t\t@ instruction: 0xf3120020\n-\tmovt\tr0, #24608\t@ 0x6020\n-\t\t\t@ instruction: 0xf2fe0020\n-\t\t\t@ instruction: 0xf2e80020\n-\t\t\t@ instruction: 0xf2de0020\n+\tands.w\tr0, r4, #10485760\t@ 0xa00000\n+\t\t\t@ instruction: 0xf34a0020\n+\t\t\t@ instruction: 0xf31a0020\n+\tmovt\tr0, #57376\t@ 0xe020\n+\t\t\t@ instruction: 0xf3060020\n+\t\t\t@ instruction: 0xf2f00020\n+\t\t\t@ instruction: 0xf2e60020\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr1, sp, #528\t@ 0x210\n+\tadd\tr1, sp, #576\t@ 0x240\n \tmovs\tr7, r3\n-\tadd\tr1, sp, #520\t@ 0x208\n+\tadd\tr1, sp, #568\t@ 0x238\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #192\t@ 0xc0\n+\tadd\tr0, sp, #240\t@ 0xf0\n \tmovs\tr7, r3\n-\tadd\tr0, sp, #184\t@ 0xb8\n+\tadd\tr0, sp, #232\t@ 0xe8\n \tmovs\tr7, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr6, sp, #136\t@ 0x88\n /usr/include/c++/10/ostream:391\n \tldr.w\tr9, [pc, #836]\t@ 1ec850 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4ea1c>\n@@ -981129,37 +981128,37 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #256\t@ (adr r6, 1ec968 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4eb34>)\n+\tadd\tr6, pc, #304\t@ (adr r6, 1ec998 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4eb64>)\n \tmovs\tr7, r3\n-\tadd\tr6, pc, #248\t@ (adr r6, 1ec964 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4eb30>)\n+\tadd\tr6, pc, #296\t@ (adr r6, 1ec994 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4eb60>)\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldc\t0, cr0, [ip], #128\t@ 0x80\n+\tstcl\t0, cr0, [r4], {32}\n \tmovs\tr0, #10\n \tmovs\tr4, r5\n-\tldc\t0, cr0, [r4], {32}\n-\tb.n\t1ece28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4eff4>\n+\tldc\t0, cr0, [ip], {32}\n+\tb.n\t1ece38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4f004>\n \tmovs\tr0, r4\n \tsubs\tr2, r6, #5\n \tmovs\tr4, r5\n-\tsbcs.w\tr0, lr, r0, asr #32\n+\t\t\t@ instruction: 0xeb860020\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #48]\t@ 0x30\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd\tr1, sp, #56\t@ 0x38\n \tcmp\tr0, r1\n \tbeq.n\t1ec834 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x4ea00>\n /usr/include/c++/10/bits/basic_string.h:237\n@@ -981533,17 +981532,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #624\t@ 0x270\n+\tadd\tr7, sp, #656\t@ 0x290\n \tmovs\tr0, r4\n-\t\t\t@ instruction: 0xe98a0020\n+\t\t\t@ instruction: 0xe9920020\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Read::performQualityClip(unsigned int, unsigned int):\n ./src/mira/read.C:6297\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -982767,17 +982766,17 @@\n \tmovs\tr4, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr6, r5, #5\n \tmovs\tr4, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsvc\t118\t@ 0x76\n+\tsvc\t126\t@ 0x7e\n \tmovs\tr0, r4\n-\tsvc\t140\t@ 0x8c\n+\tsvc\t148\t@ 0x94\n \tmovs\tr0, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n std::vector, std::allocator >, std::allocator, std::allocator > > >& boost::algorithm::iter_split, std::allocator >, std::allocator, std::allocator > > >, std::__cxx11::basic_string, std::allocator > const&, boost::algorithm::detail::token_finderF > >(std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::__cxx11::basic_string, std::allocator > const&, boost::algorithm::detail::token_finderF >) [clone .isra.0]:\n /usr/include/boost/algorithm/string/iter_find.hpp:147\n@@ -984189,23 +984188,23 @@\n \t...\n \t\t\t@ instruction: 0xf35a002b\n \t\t\t@ instruction: 0xf34e002b\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r1, #12\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r1, r3, r5}\n+\tstmia\tr6!, {r1, r4, r5}\n \tmovs\tr2, r4\n-\tbhi.n\t1edeb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5007c>\n+\tbhi.n\t1edec0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5008c>\n \tmovs\tr0, r4\n \tlsrs\tr4, r3, #25\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tbvs.n\t1ede9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x50068>\n+\tbvs.n\t1edeac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x50078>\n \tmovs\tr0, r4\n \torr.w\tr0, r6, #43\t@ 0x2b\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #24]\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr6, #0\n \tldr\tr3, [sp, #20]\n@@ -985225,52 +985224,52 @@\n \tldr.w\tr1, [sl, ip]\n \tldr.w\tr2, [sl, r6]\n \tblx\tb700 <__cxa_throw@plt>\n \tnop.w\n \t...\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tbcs.n\t1ee74c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x50918>\n+\tbcs.n\t1ee75c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x50928>\n \tmovs\tr0, r4\n-\tldrsb\tr0, [r5, r6]\n+\tldrsb\tr0, [r6, r6]\n \tmovs\tr1, r4\n-\t\t\t@ instruction: 0xf4b0001f\n-\tldrsb\tr2, [r7, r5]\n+\t\t\t@ instruction: 0xf4bc001f\n+\tldrsb\tr2, [r0, r6]\n \tmovs\tr1, r4\n-\tldrsb\tr2, [r4, r5]\n+\tldrsb\tr2, [r5, r5]\n \tmovs\tr1, r4\n-\tldrsb\tr2, [r1, r5]\n+\tldrsb\tr2, [r2, r5]\n \tmovs\tr1, r4\n-\tbne.n\t1ee63c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x50808>\n+\tbne.n\t1ee64c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x50818>\n \tmovs\tr0, r4\n-\tldrsb\tr0, [r3, r4]\n+\tldrsb\tr0, [r4, r4]\n \tmovs\tr1, r4\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r4, #58]\t@ 0x3a\n+\tstrh\tr0, [r6, #58]\t@ 0x3a\n \tmovs\tr7, r3\n-\tstrh\tr2, [r4, #58]\t@ 0x3a\n+\tstrh\tr6, [r5, #58]\t@ 0x3a\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrh\tr4, [r1, #48]\t@ 0x30\n+\tstrh\tr0, [r3, #48]\t@ 0x30\n \tmovs\tr7, r3\n-\tstrh\tr2, [r1, #48]\t@ 0x30\n+\tstrh\tr6, [r2, #48]\t@ 0x30\n \tmovs\tr7, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #248\t@ 0xf8\n \tvmov\ts16, r8\n \tadd.w\tr8, sp, #184\t@ 0xb8\n \tvmov\tr0, s16\n \tblx\tbcc4 \n@@ -985593,27 +985592,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r2, #34]\t@ 0x22\n+\tstrh\tr0, [r4, #34]\t@ 0x22\n \tmovs\tr7, r3\n-\tstrh\tr2, [r2, #34]\t@ 0x22\n+\tstrh\tr6, [r3, #34]\t@ 0x22\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrh\tr6, [r7, #22]\n+\tstrh\tr2, [r1, #24]\n \tmovs\tr7, r3\n-\tstrh\tr4, [r7, #22]\n+\tstrh\tr0, [r1, #24]\n \tmovs\tr7, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #248\t@ 0xf8\n \tvmov\ts16, r8\n \tadd.w\tr8, sp, #184\t@ 0xb8\n \tvmov\tr0, s16\n \tblx\tbcc4 \n@@ -985974,21 +985973,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr0, [r6, #10]\n+\tstrh\tr4, [r7, #10]\n \tmovs\tr7, r3\n-\tstrh\tr6, [r5, #10]\n+\tstrh\tr2, [r7, #10]\n \tmovs\tr7, r3\n-\tstrh\tr4, [r7, #2]\n+\tstrh\tr0, [r1, #4]\n \tmovs\tr7, r3\n-\tstrh\tr2, [r7, #2]\n+\tstrh\tr6, [r0, #4]\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -986733,41 +986732,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr2, [r0, #23]\n+\tldrb\tr6, [r1, #23]\n \tmovs\tr7, r3\n-\tldrb\tr4, [r7, #22]\n+\tldrb\tr0, [r1, #23]\n \tmovs\tr7, r3\n-\tstmia\tr6!, {r1, r2, r3, r4, r5}\n+\tstmia\tr6!, {r1, r2, r6}\n \tmovs\tr0, r4\n-\tstmia\tr6!, {r3, r4}\n+\tstmia\tr6!, {r5}\n \tmovs\tr0, r4\n-\tstmia\tr6!, {r1, r3}\n+\tstmia\tr6!, {r1, r4}\n \tmovs\tr0, r4\n-\tstr\tr6, [sp, #672]\t@ 0x2a0\n+\tstr\tr6, [sp, #704]\t@ 0x2c0\n \tmovs\tr0, r4\n-\tstmia\tr5!, {r1, r4, r5, r6, r7}\n+\tstmia\tr5!, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr0, r4\n-\tstmia\tr6!, {r1, r2, r6, r7}\n+\tstmia\tr6!, {r1, r2, r3, r6, r7}\n \tmovs\tr0, r4\n-\tldr\tr2, [pc, #848]\t@ (1ef618 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x517e4>)\n+\tldr\tr2, [pc, #880]\t@ (1ef638 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x51804>)\n \tmovs\tr1, r4\n-\tstmia\tr5!, {r1, r2, r6}\n+\tstmia\tr5!, {r1, r2, r3, r6}\n \tmovs\tr0, r4\n-\tstmia\tr6!, {r4, r5, r6}\n+\tstmia\tr6!, {r3, r4, r5, r6}\n \tmovs\tr0, r4\n-\tstmia\tr6!, {r2, r4, r5, r6}\n+\tstmia\tr6!, {r2, r3, r4, r5, r6}\n \tmovs\tr0, r4\n-\tstr\tr5, [sp, #760]\t@ 0x2f8\n+\tstr\tr5, [sp, #792]\t@ 0x318\n \tmovs\tr0, r4\n-\tstmia\tr5!, {r3}\n+\tstmia\tr5!, {r4}\n \tmovs\tr0, r4\n Read::hasTag(std::__cxx11::basic_string, std::allocator > const&, int) const:\n ./src/mira/read.C:3931\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r2\n \tldr\tr3, [pc, #792]\t@ (1ef5fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x517c8>)\n \tsub\tsp, #252\t@ 0xfc\n@@ -987212,17 +987211,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr0, [r4, #28]\n+\tstrb\tr4, [r5, #28]\n \tmovs\tr7, r3\n-\tstrb\tr6, [r3, #28]\n+\tstrb\tr2, [r5, #28]\n \tmovs\tr7, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -988606,27 +988605,27 @@\n \tmovs\tr0, r0\n \tbvc.n\t1eff40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5210c>\n \tmovs\tr3, r5\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #25\n \tmovs\tr0, r0\n-\tbkpt\t0x004e\n+\tbkpt\t0x0056\n \tmovs\tr0, r4\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r1, r2, r4, r6, r7}\n+\tstmia\tr1!, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr0, r4\n-\tpop\t{r2, r3, pc}\n+\tpop\t{r2, r4, pc}\n \tmovs\tr0, r4\n \tstr\tr6, [r4, #60]\t@ 0x3c\n \tmovs\tr7, r3\n-\tstmia\tr0!, {r3, r4, r5, r6, r7}\n+\tstmia\tr1!, {}\n \tmovs\tr0, r4\n \tstr\tr4, [r4, #48]\t@ 0x30\n \tmovs\tr7, r3\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tbcc.n\t1f00b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5227c>\n \tmovs\tr3, r5\n@@ -988636,41 +988635,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [r7, #100]\t@ 0x64\n+\tldr\tr6, [r0, #104]\t@ 0x68\n \tmovs\tr7, r3\n-\tldr\tr0, [r7, #100]\t@ 0x64\n+\tldr\tr4, [r0, #104]\t@ 0x68\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrh\tr6, [r6, #18]\n+\tldrh\tr6, [r7, #18]\n \tmovs\tr0, r4\n-\tstrb\tr2, [r3, r4]\n+\tstrb\tr2, [r4, r4]\n \tmovs\tr2, r4\n-\tstr\tr2, [r7, #96]\t@ 0x60\n+\tstr\tr2, [r0, #100]\t@ 0x64\n \tmovs\tr2, r4\n \tlsrs\tr0, r3, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb7ae\n+\t\t\t@ instruction: 0xb7b6\n \tmovs\tr0, r4\n \tldrsh\tr2, [r6, r1]\n \tmovs\tr7, r3\n \tldrsh\tr2, [r5, r1]\n \tmovs\tr7, r3\n-\tldrh\tr2, [r4, #26]\n+\tldrh\tr6, [r5, #26]\n \tmovs\tr7, r3\n ./src/mira/../../src/mira/multitag.H:179\n \tmov\tr0, r9\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr.w\tr0, [fp]\n /usr/include/c++/10/bits/basic_string.h:231\n@@ -989448,47 +989447,47 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #1016]\t@ 0x3f8\n+\tstr\tr2, [sp, #40]\t@ 0x28\n \tmovs\tr7, r3\n-\tstr\tr1, [sp, #968]\t@ 0x3c8\n+\tstr\tr1, [sp, #1016]\t@ 0x3f8\n \tmovs\tr7, r3\n-\tcbnz\tr2, 1f061c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x527e8>\n+\tcbnz\tr2, 1f061e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x527ea>\n \tmovs\tr1, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tuxth\tr4, r5\n+\tuxth\tr4, r6\n \tmovs\tr0, r4\n-\tuxth\tr4, r2\n+\tuxth\tr4, r3\n \tmovs\tr0, r4\n-\tuxth\tr6, r4\n+\tuxth\tr6, r5\n \tmovs\tr0, r4\n-\tcbz\tr6, 1f0654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52820>\n+\tcbz\tr6, 1f0656 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52822>\n \tmovs\tr0, r4\n-\tcbz\tr2, 1f0654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52820>\n+\tcbz\tr2, 1f0656 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52822>\n \tmovs\tr0, r4\n-\tcbz\tr4, 1f0656 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52822>\n+\tcbz\tr4, 1f0658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52824>\n \tmovs\tr0, r4\n-\tcbz\tr6, 1f065c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52828>\n+\tcbz\tr6, 1f065e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5282a>\n \tmovs\tr0, r4\n-\tuxth\tr6, r1\n+\tuxth\tr6, r2\n \tmovs\tr0, r4\n-\tcbz\tr4, 1f063e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5280a>\n+\tcbz\tr4, 1f0640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5280c>\n \tmovs\tr0, r4\n-\tcbz\tr4, 1f0642 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5280e>\n+\tcbz\tr4, 1f0644 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52810>\n \tmovs\tr0, r4\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [r4, #0]\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd.w\tip, sp, #48\t@ 0x30\n \tcmp\tr0, ip\n \tbeq.n\t1f0636 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x52802>\n@@ -989834,19 +989833,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r1, #42]\t@ 0x2a\n+\tldrh\tr0, [r3, #42]\t@ 0x2a\n \tmovs\tr7, r3\n-\tldrh\tr0, [r0, #42]\t@ 0x2a\n+\tldrh\tr4, [r1, #42]\t@ 0x2a\n \tmovs\tr7, r3\n-\tpush\t{r4, lr}\n+\tpush\t{r3, r4, lr}\n \tmovs\tr1, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -990628,59 +990627,59 @@\n \t...\n \tstmia\tr6!, {r1, r2, r3, r4, r5}\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr6!, {r2, r4, r5}\n \tmovs\tr3, r5\n-\tadd\tr7, sp, #304\t@ 0x130\n+\tadd\tr7, sp, #336\t@ 0x150\n \tmovs\tr0, r4\n-\tadd\tr6, sp, #872\t@ 0x368\n+\tadd\tr6, sp, #904\t@ 0x388\n \tmovs\tr0, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #336\t@ 0x150\n+\tadd\tr6, sp, #368\t@ 0x170\n \tmovs\tr0, r4\n-\tadd\tr6, sp, #312\t@ 0x138\n+\tadd\tr6, sp, #344\t@ 0x158\n \tmovs\tr0, r4\n-\tadd\tr6, sp, #232\t@ 0xe8\n+\tadd\tr6, sp, #264\t@ 0x108\n \tmovs\tr0, r4\n-\tadd\tr7, pc, #952\t@ (adr r7, 1f12c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5348c>)\n+\tadd\tr7, pc, #984\t@ (adr r7, 1f12e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x534ac>)\n \tmovs\tr0, r4\n-\tadd\tr5, sp, #296\t@ 0x128\n+\tadd\tr5, sp, #328\t@ 0x148\n \tmovs\tr0, r4\n \tstmia\tr3!, {r1, r2, r7}\n \tmovs\tr3, r5\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #592\t@ 0x250\n+\tadd\tr3, sp, #624\t@ 0x270\n \tmovs\tr0, r4\n-\tadd\tr3, sp, #584\t@ 0x248\n+\tadd\tr3, sp, #616\t@ 0x268\n \tmovs\tr0, r4\n-\tadd\tr3, sp, #24\n+\tadd\tr3, sp, #56\t@ 0x38\n \tmovs\tr0, r4\n-\tadd\tr2, sp, #760\t@ 0x2f8\n+\tadd\tr2, sp, #792\t@ 0x318\n \tmovs\tr0, r4\n-\tadd\tr2, sp, #664\t@ 0x298\n+\tadd\tr2, sp, #696\t@ 0x2b8\n \tmovs\tr0, r4\n Read::loadDataFromEXP(std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/read.C:7031\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr0, [pc, #2656]\t@ 1f19a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53b6c>\n \tldr.w\tr3, [pc, #2656]\t@ 1f19a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53b70>\n@@ -992071,31 +992070,31 @@\n \tb.n\t1f19e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53bae>\n \tstmia\tr0!, {r3, r4}\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tit\tal\n \tmoval\tr3, r5\n-\tstr\tr6, [sp, #24]\n+\tstr\tr6, [sp, #72]\t@ 0x48\n \tmovs\tr7, r3\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #792\t@ (adr r1, 1f1cd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53e9c>)\n+\tadd\tr1, pc, #824\t@ (adr r1, 1f1cf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53ebc>)\n \tmovs\tr0, r4\n-\tadd\tr1, pc, #968\t@ (adr r1, 1f1d84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53f50>)\n+\tadd\tr1, pc, #1000\t@ (adr r1, 1f1da4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53f70>)\n \tmovs\tr0, r4\n-\tstrb\tr2, [r6, #11]\n+\tstrb\tr2, [r7, #11]\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #664\t@ (adr r1, 1f1c64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53e30>)\n+\tadd\tr1, pc, #696\t@ (adr r1, 1f1c84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53e50>)\n \tmovs\tr0, r4\n-\tadd\tr1, pc, #600\t@ (adr r1, 1f1c28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53df4>)\n+\tadd\tr1, pc, #632\t@ (adr r1, 1f1c48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x53e14>)\n \tmovs\tr0, r4\n \tmov.w\tr3, #4294967295\t@ 0xffffffff\n \tstr.w\tr3, [r9, r7, lsl #2]\n ./src/mira/read.C:7213\n \tadds\tr7, #1\n ./src/mira/read.C:7224\n \tadd.w\tip, ip, #2\n@@ -993375,67 +993374,67 @@\n \tnop\n \tcbz\tr0, 1f235a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x54526>\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #784]\t@ 0x310\n+\tstr\tr6, [sp, #816]\t@ 0x330\n \tmovs\tr0, r4\n-\tldrb\tr0, [r7, #3]\n+\tldrb\tr4, [r0, #4]\n \tmovs\tr7, r3\n-\tldr\tr0, [pc, #120]\t@ (1f2380 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5454c>)\n+\tldr\tr0, [pc, #152]\t@ (1f23a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5456c>)\n \tmovs\tr2, r4\n-\tstr\tr6, [sp, #336]\t@ 0x150\n+\tstr\tr6, [sp, #368]\t@ 0x170\n \tmovs\tr0, r4\n-\tldr\tr4, [sp, #616]\t@ 0x268\n+\tldr\tr4, [sp, #648]\t@ 0x288\n \tmovs\tr0, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #240]\t@ 0xf0\n+\tldr\tr3, [sp, #272]\t@ 0x110\n \tmovs\tr0, r4\n-\tldr\tr4, [sp, #104]\t@ 0x68\n+\tldr\tr4, [sp, #136]\t@ 0x88\n \tmovs\tr0, r4\n-\tldr\tr2, [sp, #672]\t@ 0x2a0\n+\tldr\tr2, [sp, #704]\t@ 0x2c0\n \tmovs\tr0, r4\n-\tldr\tr3, [sp, #960]\t@ 0x3c0\n+\tldr\tr3, [sp, #992]\t@ 0x3e0\n \tmovs\tr0, r4\n-\tldr\tr3, [sp, #896]\t@ 0x380\n+\tldr\tr3, [sp, #928]\t@ 0x3a0\n \tmovs\tr0, r4\n-\tldr\tr3, [sp, #848]\t@ 0x350\n+\tldr\tr3, [sp, #880]\t@ 0x370\n \tmovs\tr0, r4\n-\tldr\tr1, [sp, #992]\t@ 0x3e0\n+\tldr\tr2, [sp, #0]\n \tmovs\tr0, r4\n-\tldr\tr2, [sp, #784]\t@ 0x310\n+\tldr\tr2, [sp, #816]\t@ 0x330\n \tmovs\tr0, r4\n-\tldr\tr1, [sp, #544]\t@ 0x220\n+\tldr\tr1, [sp, #576]\t@ 0x240\n \tmovs\tr0, r4\n-\tldr\tr2, [r7, #44]\t@ 0x2c\n+\tldr\tr6, [r0, #48]\t@ 0x30\n \tmovs\tr7, r3\n-\tldr\tr1, [sp, #40]\t@ 0x28\n+\tldr\tr1, [sp, #72]\t@ 0x48\n \tmovs\tr0, r4\n-\tldr\tr1, [sp, #24]\n+\tldr\tr1, [sp, #56]\t@ 0x38\n \tmovs\tr0, r4\n-\tldr\tr0, [sp, #952]\t@ 0x3b8\n+\tldr\tr0, [sp, #984]\t@ 0x3d8\n \tmovs\tr0, r4\n-\tldr\tr0, [sp, #568]\t@ 0x238\n+\tldr\tr0, [sp, #600]\t@ 0x258\n \tmovs\tr0, r4\n \tsubs\tr5, #8\n \tmovs\tr7, r3\n-\tldr\tr0, [sp, #832]\t@ 0x340\n+\tldr\tr0, [sp, #864]\t@ 0x360\n \tmovs\tr0, r4\n-\tldr\tr0, [sp, #792]\t@ 0x318\n+\tldr\tr0, [sp, #824]\t@ 0x338\n \tmovs\tr0, r4\n-\tldr\tr0, [sp, #776]\t@ 0x308\n+\tldr\tr0, [sp, #808]\t@ 0x328\n \tmovs\tr0, r4\n-\tstr\tr7, [sp, #888]\t@ 0x378\n+\tstr\tr7, [sp, #920]\t@ 0x398\n \tmovs\tr0, r4\n std::vector >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r0, #0]\n@@ -994388,17 +994387,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmuls\tr4, r7\n+\tbics\tr0, r1\n \tmovs\tr7, r3\n-\tmuls\tr2, r7\n+\tbics\tr6, r0\n \tmovs\tr7, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -994738,17 +994737,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr6, r2\n+\tlsrs\tr2, r4\n \tmovs\tr7, r3\n-\tlsrs\tr4, r2\n+\tlsrs\tr0, r4\n \tmovs\tr7, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -995043,17 +995042,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr6, #114\t@ 0x72\n+\tsubs\tr6, #126\t@ 0x7e\n \tmovs\tr7, r3\n-\tsubs\tr6, #112\t@ 0x70\n+\tsubs\tr6, #124\t@ 0x7c\n \tmovs\tr7, r3\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -995124,15 +995123,15 @@\n \tldr\tr3, [r4, #8]\n \tsubs\tr1, r3, r6\n \tb.n\t1f2f22 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x550ee>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #4]\t@ (1f2f38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55104>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tpush\t{r1, r3, lr}\n+\tpush\t{r1, r2, r4, lr}\n \tmovs\tr7, r3\n std::vector >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:69\n \tcmp.w\tr1, #536870912\t@ 0x20000000\n /usr/include/c++/10/bits/vector.tcc:66\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/vector.tcc:69\n@@ -995202,15 +995201,15 @@\n \tsubs\tr1, r1, r6\n \tb.n\t1f2f92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5515e>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (1f2fb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5517c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tpush\t{r2, r4, r7}\n+\tpush\t{r5, r7}\n \tmovs\tr7, r3\n std::vector >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:69\n \tcmp.w\tr1, #1073741824\t@ 0x40000000\n /usr/include/c++/10/bits/vector.tcc:66\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/vector.tcc:69\n@@ -995349,15 +995348,15 @@\n \tstrh\tr1, [r4, #0]\n \tb.n\t1f3026 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x551f2>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #8]\t@ (1f30dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x552a8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcbz\tr0, 1f313a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55306>\n+\tcbz\tr4, 1f313c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55308>\n \tmovs\tr7, r3\n std::vector >::insert(__gnu_cxx::__normal_iterator > >, Read::bposhashstat_t const&):\n /usr/include/c++/10/bits/vector.tcc:130\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr\tr0, [pc, #480]\t@ (1f32c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55494>)\n \tldr\tr3, [pc, #480]\t@ (1f32cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55498>)\n@@ -995599,15 +995598,15 @@\n \tblx\tb6dc \n \tldr\tr6, [sp, #464]\t@ 0x1d0\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [sp, #136]\t@ 0x88\n \tmovs\tr3, r5\n-\tsubs\tr1, #98\t@ 0x62\n+\tsubs\tr1, #110\t@ 0x6e\n \tmovs\tr7, r3\n std::vector, std::allocator >, std::allocator, std::allocator > > >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:69\n \tmovw\tr3, #21845\t@ 0x5555\n \tmovt\tr3, #1365\t@ 0x555\n \tcmp\tr1, r3\n /usr/include/c++/10/bits/vector.tcc:66\n@@ -995730,15 +995729,15 @@\n /usr/include/c++/10/bits/vector.tcc:92\n \tmov\tlr, ip\n \tb.n\t1f3366 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55532>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #4]\t@ (1f33c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55590>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadd\tsp, #504\t@ 0x1f8\n+\tsub\tsp, #40\t@ 0x28\n \tmovs\tr7, r3\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, char const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldrd\tr9, r7, [r0]\n /usr/include/c++/10/bits/stl_vector.h:1758\n@@ -995838,15 +995837,15 @@\n \tcmp.w\tr9, #0\n \tbeq.n\t1f3434 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55600>\n \tb.n\t1f3450 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5561c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1f3480 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5564c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadds\tr7, #170\t@ 0xaa\n+\tadds\tr7, #182\t@ 0xb6\n \tmovs\tr7, r3\n std::vector >::insert(__gnu_cxx::__normal_iterator > >, char const&):\n /usr/include/c++/10/bits/vector.tcc:130\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/stl_iterator.h:1197\n \tldr\tr3, [r0, #0]\n@@ -996072,15 +996071,15 @@\n \tldr\tr0, [r4, #8]\n \tsub.w\tr1, r0, r9\n \tb.n\t1f35c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55794>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1f35e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x557ac>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldrsh\tr6, [r6, r5]\n+\tldrsh\tr2, [r0, r6]\n \tmovs\tr7, r3\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.n\t1f36c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55894>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -996389,15 +996388,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t1f38b2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55a7e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1f38dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55aa8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrb\tr4, [r7, r1]\n+\tldrb\tr0, [r1, r2]\n \tmovs\tr7, r3\n std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned int, char const&):\n /usr/include/c++/10/bits/vector.tcc:512\n \tcbnz\tr2, 1f38e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55ab0>\n \tbx\tlr\n /usr/include/c++/10/bits/vector.tcc:509\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -996578,15 +996577,15 @@\n \tblx\tb684 \n \tb.n\t1f393c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55b08>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1f3a18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55be4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrh\tr4, [r3, r5]\n+\tldrh\tr0, [r5, r5]\n \tmovs\tr7, r3\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, multitag_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4160749568\t@ 0xf8000000\n \tldrd\tr8, r9, [r0]\n@@ -996787,15 +996786,15 @@\n \tadd.w\tr6, r8, #16\n \tstmia.w\tsl, {r0, r1, r2, r3}\n \tb.n\t1f3aa2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55c6e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (1f3bfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55dc8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadds\tr0, #46\t@ 0x2e\n+\tadds\tr0, #58\t@ 0x3a\n \tmovs\tr7, r3\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, double&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #4026531840\t@ 0xf0000000\n@@ -996902,15 +996901,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t1f3cb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55e7c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (1f3cd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55e9c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr7, #92\t@ 0x5c\n+\tcmp\tr7, #104\t@ 0x68\n \tmovs\tr7, r3\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tldr\tr2, [pc, #100]\t@ (1f3d3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55f08>)\n \tldr\tr3, [pc, #104]\t@ (1f3d40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x55f0c>)\n \tpush\t{r4, r5, r6, r7, lr}\n \tadd\tr2, pc\n@@ -1000199,17 +1000198,17 @@\n \tmovs\tr3, r5\n \tldrb\tr2, [r4, #20]\n \tmovs\tr3, r5\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr4, [r7, #120]\t@ 0x78\n+\tstr\tr4, [r0, #124]\t@ 0x7c\n \tmovs\tr0, r4\n-\tstr\tr6, [r5, #120]\t@ 0x78\n+\tstr\tr6, [r6, #120]\t@ 0x78\n \tmovs\tr0, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::checkForLockedBase(unsigned int, PlacedContigReads::const_iterator, int&, int&):\n ./src/mira/contig_analysis.C:594\n@@ -1001102,33 +1001101,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r6, #1\n \tmovs\tr0, r0\n \tldrb\tr0, [r7, #2]\n \tmovs\tr3, r5\n \tlsrs\tr4, r5, #9\n \tmovs\tr0, r0\n-\tstr\tr4, [r5, #60]\t@ 0x3c\n+\tstr\tr4, [r6, #60]\t@ 0x3c\n \tmovs\tr0, r4\n-\tstr\tr4, [r4, #60]\t@ 0x3c\n+\tstr\tr4, [r5, #60]\t@ 0x3c\n \tmovs\tr0, r4\n-\tstr\tr2, [r0, #60]\t@ 0x3c\n+\tstr\tr2, [r1, #60]\t@ 0x3c\n \tmovs\tr0, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstr\tr0, [r2, #76]\t@ 0x4c\n+\tstr\tr0, [r3, #76]\t@ 0x4c\n \tmovs\tr1, r4\n-\tstr\tr2, [r4, #52]\t@ 0x34\n+\tstr\tr2, [r5, #52]\t@ 0x34\n \tmovs\tr0, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #9\n+\tasrs\tr0, r7, #9\n \tmovs\tr7, r3\n-\tasrs\tr2, r5, #9\n+\tasrs\tr6, r6, #9\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n Contig::checkForLockedBaseComplement(unsigned int, PlacedContigReads::const_iterator, int&, int&):\n ./src/mira/contig_analysis.C:653\n \tsub\tsp, #8\n \tpush\t{r4, r5, lr}\n@@ -1001262,17 +1001261,17 @@\n \tb.n\t1f5c30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x57dfc>\n \tstrb\tr4, [r5, #14]\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr0, [r4, #14]\n \tmovs\tr3, r5\n-\tstr\tr0, [r2, #8]\n+\tstr\tr0, [r3, #8]\n \tmovs\tr0, r4\n-\tstr\tr2, [r1, #8]\n+\tstr\tr2, [r2, #8]\n \tmovs\tr0, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::csbrm_checkReadsForHomopolymers(unsigned int, unsigned int, std::vector > const&):\n ./src/mira/contig_analysis.C:4272\n@@ -1002236,15 +1002235,15 @@\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r1, #116]\t@ 0x74\n \tmovs\tr3, r5\n \tldr\tr0, [r2, #92]\t@ 0x5c\n \tmovs\tr3, r5\n-\tcmp\tr1, #64\t@ 0x40\n+\tcmp\tr1, #72\t@ 0x48\n \tmovs\tr0, r4\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1003492,23 +1003491,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #4\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tldrb\tr4, [r7, #1]\n+\tldrb\tr4, [r0, #2]\n \tmovs\tr0, r4\n \tldr\tr2, [r4, #24]\n \tmovs\tr3, r5\n \tlsrs\tr0, r7, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #24\n \tmovs\tr0, r0\n-\tstrb\tr6, [r0, r6]\n+\tstrb\tr6, [r1, r6]\n \tmovs\tr0, r4\n \tlsrs\tr4, r7, #24\n \tmovs\tr0, r0\n \tlsls\tr4, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #8\n \tmovs\tr0, r0\n@@ -1005148,17 +1005147,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #4\n \tmovs\tr0, r0\n-\tcmp\tr2, fp\n+\tcmp\tr2, ip\n \tmovs\tr0, r4\n-\tcmp\tr6, sl\n+\tcmp\tr6, fp\n \tmovs\tr0, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::nmpr_cautiousMultiSeqTypeTagging(Contig::ercci_t const&, Contig::rcci_t const&, std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > > const&, Contig::nnpos_rep_col_t const&, std::vector >&, Contig::repeatmarker_stats_t&):\n ./src/mira/contig_analysis.C:1707\n@@ -1006447,23 +1006446,23 @@\n \tmovs\tr3, r5\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #13\n \tmovs\tr0, r0\n \tstr\tr2, [r5, r1]\n \tmovs\tr3, r5\n-\tsubs\tr4, #28\n+\tsubs\tr4, #36\t@ 0x24\n \tmovs\tr0, r4\n-\tsubs\tr4, #26\n+\tsubs\tr4, #34\t@ 0x22\n \tmovs\tr0, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\torr.w\tr0, r6, lr, lsr #32\n+\torrs.w\tr0, r2, lr, lsr #32\n Contig::findBestNonMisassembledRange():\n ./src/mira/contig_analysis.C:72\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr.w\tr1, [pc, #1496]\t@ 1f8868 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5aa34>\n \tldr.w\tr2, [pc, #1496]\t@ 1f886c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5aa38>\n ./src/mira/contig_analysis.C:75\n@@ -1007212,63 +1007211,63 @@\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr4, [pc, #712]\t@ (1f8b3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ad08>)\n \tmovs\tr3, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr3, #228\t@ 0xe4\n+\tsubs\tr3, #236\t@ 0xec\n \tmovs\tr0, r4\n \tasrs\tr4, r2, #1\n \tmovs\tr0, r0\n-\tsubs\tr4, #52\t@ 0x34\n+\tsubs\tr4, #60\t@ 0x3c\n \tmovs\tr0, r4\n-\tsubs\tr3, #166\t@ 0xa6\n+\tsubs\tr3, #174\t@ 0xae\n \tmovs\tr0, r4\n \tldr\tr2, [pc, #784]\t@ (1f8b9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ad68>)\n \tmovs\tr3, r5\n-\tsubs\tr2, #36\t@ 0x24\n+\tsubs\tr2, #44\t@ 0x2c\n \tmovs\tr0, r4\n-\tsubs\tr2, #24\n+\tsubs\tr2, #32\n \tmovs\tr0, r4\n-\tsubs\tr2, #10\n+\tsubs\tr2, #18\n \tmovs\tr0, r4\n-\tsubs\tr1, #252\t@ 0xfc\n+\tsubs\tr2, #4\n \tmovs\tr0, r4\n-\tsubs\tr1, #238\t@ 0xee\n+\tsubs\tr1, #246\t@ 0xf6\n \tmovs\tr0, r4\n-\tsubs\tr1, #224\t@ 0xe0\n+\tsubs\tr1, #232\t@ 0xe8\n \tmovs\tr0, r4\n-\tsubs\tr1, #210\t@ 0xd2\n+\tsubs\tr1, #218\t@ 0xda\n \tmovs\tr0, r4\n-\tsubs\tr1, #196\t@ 0xc4\n+\tsubs\tr1, #204\t@ 0xcc\n \tmovs\tr0, r4\n-\tsubs\tr1, #182\t@ 0xb6\n+\tsubs\tr1, #190\t@ 0xbe\n \tmovs\tr0, r4\n-\tsubs\tr1, #168\t@ 0xa8\n+\tsubs\tr1, #176\t@ 0xb0\n \tmovs\tr0, r4\n-\tsubs\tr1, #154\t@ 0x9a\n+\tsubs\tr1, #162\t@ 0xa2\n \tmovs\tr0, r4\n-\tsubs\tr1, #140\t@ 0x8c\n+\tsubs\tr1, #148\t@ 0x94\n \tmovs\tr0, r4\n-\tsubs\tr1, #122\t@ 0x7a\n+\tsubs\tr1, #130\t@ 0x82\n \tmovs\tr0, r4\n-\tsubs\tr1, #112\t@ 0x70\n+\tsubs\tr1, #120\t@ 0x78\n \tmovs\tr0, r4\n-\tsubs\tr1, #106\t@ 0x6a\n+\tsubs\tr1, #114\t@ 0x72\n \tmovs\tr0, r4\n-\tsubs\tr1, #78\t@ 0x4e\n+\tsubs\tr1, #86\t@ 0x56\n \tmovs\tr0, r4\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tsubs\tr0, #120\t@ 0x78\n+\tsubs\tr0, #128\t@ 0x80\n \tmovs\tr0, r4\n-\tb.n\t1f8130 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5a2fc>\n+\tb.n\t1f8148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5a314>\n \tmovs\tr6, r3\n Contig::allowedRefIDs_forbidAll():\n ./src/mira/contig_analysis.C:1272\n \tpush\t{lr}\n /usr/include/c++/10/bits/stl_bvector.h:1329\n \tmovs\tr2, #0\n ./src/mira/contig_analysis.C:1274\n@@ -1008520,15 +1008519,15 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tsubs\tr5, #22\n \tmovs\tr3, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr4, #250\t@ 0xfa\n \tmovs\tr3, r5\n-\tcmp\tr5, #28\n+\tcmp\tr5, #36\t@ 0x24\n \tmovs\tr0, r4\n Contig::csbrm_checkForCleanBlock(HDeque::hditer):\n ./src/mira/contig_analysis.C:4329\n \tldr\tr2, [pc, #960]\t@ (1f96bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5b888>)\n \tldr\tr3, [pc, #964]\t@ (1f96c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5b88c>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n@@ -1010033,17 +1010032,17 @@\n \tmovs\tr0, r0\n \tadds\tr7, #122\t@ 0x7a\n \tmovs\tr3, r5\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tble.n\t1f9cec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5beb8>\n+\tble.n\t1f9cfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5bec8>\n \tmovs\tr7, r3\n-\tmovs\tr3, #74\t@ 0x4a\n+\tmovs\tr3, #82\t@ 0x52\n \tmovs\tr0, r4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::analyseReadCoverage(std::vector >&, std::vector >&, std::vector >):\n ./src/mira/contig_analysis.C:3645\n@@ -1011591,15 +1011590,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpop\t{r1, r2, r3, r6, pc}\n+\tpop\t{r1, r2, r4, r6, pc}\n \tmovs\tr7, r3\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1011975,25 +1011974,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t1fafb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5d180>\n+\tb.n\t1fafc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5d190>\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe98a001e\n-\t\t\t@ instruction: 0xe986001e\n-\tvaddl.u8\tq8, d6, d16\n+\t\t\t@ instruction: 0xe996001e\n+\t\t\t@ instruction: 0xe992001e\n+\tvaddl.u8\tq8, d14, d16\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #296\t@ 0x128\n \tldr\tr7, [pc, #780]\t@ (1faf48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5d114>)\n \tmov\tr0, r8\n \tldr.w\tfp, [sp, #20]\n@@ -1012402,27 +1012401,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n+\t\t\t@ instruction: 0xe852001e\n \tstrex\tr0, r0, [r6, #120]\t@ 0x78\n-\t\t\t@ instruction: 0xe83a001e\n-\tasrs\tr2, r1, #32\n+\tasrs\tr2, r2, #32\n \tmovs\tr1, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #11\n+\tasrs\tr4, r6, #11\n \tmovs\tr0, r4\n-\tasrs\tr6, r6, #11\n+\tasrs\tr6, r7, #11\n \tmovs\tr0, r4\n Contig::largeGapRepeatMarker(unsigned int, unsigned int, bool):\n ./src/mira/contig_analysis.C:3916\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tcmp\tr2, #1\n \tit\tcc\n \tmovcc\tr2, #1\n@@ -1014159,23 +1014158,23 @@\n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t1fbc2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5ddf8>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr6, r0, r3\n \tmovs\tr3, r5\n-\tmovs\tr6, #186\t@ 0xba\n+\tmovs\tr6, #194\t@ 0xc2\n \tmovs\tr0, r4\n-\tlsrs\tr2, r4, #7\n+\tlsrs\tr2, r5, #7\n \tmovs\tr0, r4\n \tlsrs\tr4, r7, #24\n \tmovs\tr0, r0\n-\tadd\tsp, #232\t@ 0xe8\n+\tadd\tsp, #280\t@ 0x118\n \tmovs\tr6, r3\n-\tadd\tsp, #184\t@ 0xb8\n+\tadd\tsp, #232\t@ 0xe8\n \tmovs\tr6, r3\n Contig::csbrm_fillin_groups_stst(Contig::ercci_t const&, std::vector > const&, std::vector::Entry, std::allocator::Entry> > const&, std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >&):\n ./src/mira/contig_analysis.C:4155\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n \tldr.w\tr3, [pc, #1940]\t@ 1fc440 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e60c>\n \tvpush\t{d8}\n@@ -1015200,30 +1015199,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbcc.n\t1fc540 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e70c>\n+\tbcc.n\t1fc558 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e724>\n \tmovs\tr6, r3\n-\tbcc.n\t1fc52c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e6f8>\n+\tbcc.n\t1fc544 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e710>\n \tmovs\tr6, r3\n-\t\t\t@ instruction: 0xfb2e0020\n+\t\t\t@ instruction: 0xfb360020\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbne.n\t1fc394 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e560>\n+\tbne.n\t1fc3ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e578>\n \tmovs\tr6, r3\n-\tbne.n\t1fc57c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e748>\n+\tbne.n\t1fc394 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5e560>\n \tmovs\tr6, r3\n-\tvst4.8\t{d16-d19}, [sl :128], r0\n+\tldr??.w\tr0, [r2, r0, lsl #2]\n /usr/include/c++/10/bits/stl_vector.h:1064\n \tldr.w\tr6, [r4, #-8]\n ./src/mira/../../src/mira/pcrcontainer.H:172\n \tmov.w\tlr, #12\n /usr/include/c++/10/bits/stl_vector.h:1064\n \tldr.w\tr2, [r4, #-4]\n \tldr.w\tr3, [r4, #-12]\n@@ -1016819,26 +1016818,26 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #0]\n+\tstr\tr5, [sp, #32]\n \tmovs\tr7, r3\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #1008]\t@ 0x3f0\n+\tstr\tr4, [sp, #16]\n \tmovs\tr7, r3\n-\tbics.w\tr0, lr, #31\n-\tbics.w\tr0, ip, #31\n+\torr.w\tr0, r6, #31\n+\torr.w\tr0, r4, #31\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tfp, sp, #168\t@ 0xa8\n \tldr.w\tsl, [sp, #28]\n \tmov\tr0, fp\n \tmov\tr5, r2\n \tmov\tr8, r1\n \tstr\tr7, [sp, #4]\n@@ -1017244,27 +1017243,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r2}\n+\tstmia\tr3!, {r1, r4}\n \tmovs\tr6, r3\n-\tstmia\tr3!, {r1}\n+\tstmia\tr3!, {r1, r2, r3}\n \tmovs\tr6, r3\n-\tbls.n\t1fd524 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f6f0>\n+\tbls.n\t1fd534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f700>\n \tmovs\tr0, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #712]\t@ 0x2c8\n+\tstr\tr0, [sp, #744]\t@ 0x2e8\n \tmovs\tr7, r3\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr7, [pc, #712]\t@ (1fd780 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f94c>)\n \tadd\tr4, sp, #168\t@ 0xa8\n \tldr.w\tsl, [sp, #28]\n@@ -1017619,27 +1017618,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\titt\tls\n-\tmovls\tr6, r3\n-\tit\tls\t@ unpredictable \n-\tmovls\tr6, r3\n-\tbpl.n\t1fd750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f91c>\n+\tit\tge\n+\tmovge\tr6, r3\n+\titt\tge\n+\tmovge\tr6, r3\n+\tbpl.n\t1fd760 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f92c>\t@ unpredictable \n \tmovs\tr0, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr6, [r0, #42]\t@ 0x2a\n+\tldrh\tr6, [r1, #42]\t@ 0x2a\n \tmovs\tr7, r3\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n /usr/include/boost/iterator/iterator_facade.hpp:550 (discriminator 3)\n \tmov\tr0, r8\n \tbl\t19ab50 \n ./src/mira/../../src/mira/read.H:866 (discriminator 3)\n@@ -1018227,35 +1018226,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\trevsh\tr6, r4\n+\trevsh\tr2, r6\n \tmovs\tr6, r3\n-\trevsh\tr2, r4\n+\trevsh\tr6, r5\n \tmovs\tr6, r3\n-\tbne.n\t1fdcb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5fe80>\n+\tbne.n\t1fdcc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5fe90>\n \tmovs\tr0, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcbnz\tr6, 1fdcb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5fe80>\n-\tmovs\tr6, r3\n \tcbnz\tr2, 1fdcb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5fe84>\n \tmovs\tr6, r3\n-\tldmia\tr7, {r1, r2, r3, r5, r6, r7}\n+\tcbnz\tr6, 1fdcba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5fe86>\n+\tmovs\tr6, r3\n+\tldmia\tr7, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr0, r4\n-\tb.n\t1fd77c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f948>\n+\tb.n\t1fd78c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f958>\n \tmovs\tr7, r3\n-\tb.n\t1fd674 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f840>\n+\tb.n\t1fd684 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f850>\n \tmovs\tr7, r3\n ./src/mira/../../src/mira/readgrouplib.H:270\n \tadd\tr4, sp, #104\t@ 0x68\n \tldr.w\tsl, [sp, #28]\n \tmov\tr0, r4\n \tbl\t1f505c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x57228>\n /usr/include/c++/10/ostream:611\n@@ -1018615,29 +1018614,29 @@\n /usr/include/c++/10/ostream:93\n \tadd\tr6, sl\n \tstr\tr7, [sp, #104]\t@ 0x68\n \tstr.w\tr4, [r6, #-208]\n /usr/include/c++/10/bits/basic_ios.h:282\n \tb.n\t1fdefe , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x600ca>\n \tb.n\t1fde56 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x60022>\n-\t\t\t@ instruction: 0xb87e\n+\t\t\t@ instruction: 0xb88a\n \tmovs\tr6, r3\n-\t\t\t@ instruction: 0xb872\n+\t\t\t@ instruction: 0xb87e\n \tmovs\tr6, r3\n-\tb.n\t1fdff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x601c0>\n+\tb.n\t1fe004 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x601d0>\n \tmovs\tr0, r4\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t1fd788 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f954>\n+\tb.n\t1fd798 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x5f964>\n \tmovs\tr7, r3\n-\tb.n\t1fe630 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x607fc>\n+\tb.n\t1fe640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6080c>\n \tmovs\tr7, r3\n Contig::nmpr_secondfillin(Contig::ercci_t const&, std::vector > const&, std::vector::Entry, std::allocator::Entry> > const&, std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >&):\n ./src/mira/contig_analysis.C:2346\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/contig_analysis.C:2353\n \tmovs\tr6, #0\n ./src/mira/contig_analysis.C:2346\n@@ -1021202,53 +1021201,53 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr6, [r3, #28]\n+\tstrb\tr6, [r4, #28]\n \tmovs\tr7, r3\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr2, [r5, #26]\n+\tstrb\tr2, [r6, #26]\n \tmovs\tr7, r3\n-\tadd\tr6, pc, #968\t@ (adr r6, 1ff734 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61900>)\n+\tadd\tr6, pc, #1016\t@ (adr r6, 1ff764 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61930>)\n \tmovs\tr6, r3\n-\tadd\tr6, pc, #944\t@ (adr r6, 1ff720 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x618ec>)\n+\tadd\tr6, pc, #992\t@ (adr r6, 1ff750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6191c>)\n \tmovs\tr6, r3\n-\tpop\t{r1, r3, r5, pc}\n+\tpop\t{r1, r4, r5, pc}\n \tmovs\tr0, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tstrb\tr6, [r7, #21]\n+\tstrb\tr6, [r0, #22]\n \tmovs\tr7, r3\n-\tstrb\tr2, [r1, #20]\n+\tstrb\tr2, [r2, #20]\n \tmovs\tr7, r3\n-\tadd\tr5, pc, #328\t@ (adr r5, 1ff4cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61698>)\n+\tadd\tr5, pc, #376\t@ (adr r5, 1ff4fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x616c8>)\n \tmovs\tr6, r3\n-\tadd\tr5, pc, #312\t@ (adr r5, 1ff4c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6168c>)\n+\tadd\tr5, pc, #360\t@ (adr r5, 1ff4f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x616bc>)\n \tmovs\tr6, r3\n-\tcbnz\tr6, 1ff3ee , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x615ba>\n+\tcbnz\tr6, 1ff3f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x615bc>\n \tmovs\tr0, r4\n-\tadd\tr4, pc, #712\t@ (adr r4, 1ff658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61824>)\n+\tadd\tr4, pc, #760\t@ (adr r4, 1ff688 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61854>)\n \tmovs\tr6, r3\n-\tadd\tr4, pc, #696\t@ (adr r4, 1ff64c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61818>)\n+\tadd\tr4, pc, #744\t@ (adr r4, 1ff67c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61848>)\n \tmovs\tr6, r3\n-\trevsh\tr6, r5\n+\trevsh\tr6, r6\n \tmovs\tr0, r4\n-\tadd\tr3, pc, #264\t@ (adr r3, 1ff4a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61670>)\n+\tadd\tr3, pc, #312\t@ (adr r3, 1ff4d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x616a0>)\n \tmovs\tr6, r3\n-\tadd\tr3, pc, #248\t@ (adr r3, 1ff498 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61664>)\n+\tadd\tr3, pc, #296\t@ (adr r3, 1ff4c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61694>)\n \tmovs\tr6, r3\n-\tcbnz\tr6, 1ff3c2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6158e>\n+\tcbnz\tr6, 1ff3c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61590>\n \tmovs\tr0, r4\n Contig::nmpr_rategroups(std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >&, HDeque::hditer):\n ./src/mira/contig_analysis.C:2552\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr4, #43691\t@ 0xaaab\n \tmovt\tr4, #43690\t@ 0xaaaa\n@@ -1022419,33 +1022418,33 @@\n \tmovs\tr2, r5\n \tblt.n\t1ffb34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61d00>\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbls.n\t1ffb58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x61d24>\n \tmovs\tr2, r5\n-\tstr\tr2, [sp, #264]\t@ 0x108\n+\tstr\tr2, [sp, #296]\t@ 0x128\n \tmovs\tr7, r3\n \tlsrs\tr4, r3, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r2, r4, r5, r6, r7}\n+\tstmia\tr7!, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr7, r3\n-\tstmia\tr7!, {r1, r4, r5, r6, r7}\n+\tstmia\tr7!, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr7, r3\n-\tldmia\tr0!, {r1, r2, r6}\n+\tldmia\tr0!, {r1, r2, r3, r6}\n \tmovs\tr7, r3\n-\tstmia\tr7!, {r4, r7}\n+\tstmia\tr7!, {r3, r4, r7}\n \tmovs\tr7, r3\n-\tldrb\tr6, [r6, #19]\n+\tldrb\tr6, [r7, #19]\n \tmovs\tr7, r3\n-\tldrb\tr2, [r5, #20]\n+\tldrb\tr2, [r6, #20]\n \tmovs\tr7, r3\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter) [clone .constprop.0]:\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr6, [pc, #1780]\t@ 200330 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x624fc>\n \tsub\tsp, #340\t@ 0x154\n@@ -1023315,27 +1023314,27 @@\n \tmovs\tr2, r5\n \tbcc.n\t200364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x62530>\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tldr\tr0, [r7, #72]\t@ 0x48\n+\tldr\tr4, [r0, #76]\t@ 0x4c\n \tmovs\tr6, r3\n-\tldr\tr4, [r6, #72]\t@ 0x48\n+\tldr\tr0, [r0, #76]\t@ 0x4c\n \tmovs\tr6, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr6, [r3, #60]\t@ 0x3c\n+\tldr\tr2, [r5, #60]\t@ 0x3c\n \tmovs\tr6, r3\n-\tldr\tr2, [r3, #60]\t@ 0x3c\n+\tldr\tr6, [r4, #60]\t@ 0x3c\n \tmovs\tr6, r3\n \tldmia\tr5!, {r1, r2, r3}\n \tmovs\tr2, r5\n Contig::reduceConsensusTags(std::vector::Entry, std::allocator::Entry> > const&, std::vector::Entry, std::allocator::Entry> > const&):\n ./src/mira/contig_analysis.C:3577\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n@@ -1027551,31 +1027550,31 @@\n \tmovs\tr3, r5\n \tlsrs\tr4, r0, #3\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #20\n \tmovs\tr0, r0\n \tlsls\tr2, r2, #19\n \tmovs\tr3, r5\n-\tb.n\t201f8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x64158>\n+\tb.n\t201f9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x64168>\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #192]\t@ 0xc0\n+\tldr\tr1, [sp, #224]\t@ 0xe0\n \tmovs\tr0, r4\n-\tbeq.n\t2020d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x642a0>\n+\tbeq.n\t2020ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x642b8>\n \tmovs\tr6, r3\n-\tadd\tr2, pc, #88\t@ (adr r2, 2021c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x64390>)\n+\tadd\tr2, pc, #120\t@ (adr r2, 2021e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x643b0>)\n \tmovs\tr7, r3\n \tlsls\tr2, r1, #5\n \tmovs\tr3, r5\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \titt\teq\n \tmoveq\tr2, r5\n-\tldmiaeq\tr6, {r1, r2, r4, r6}\n+\tldmiaeq\tr6, {r1, r5, r6}\n \tmovs\tr6, r3\n ./src/mira/contig_analysis.C:1552 (discriminator 1)\n \tldr\tr7, [sp, #80]\t@ 0x50\n \tldr\tr1, [sp, #24]\n \tmov\tr0, r7\n \tbl\t200e1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x62fe8>\n ./src/mira/contig_analysis.C:1555\n@@ -1029309,15 +1029308,15 @@\n \tbne.w\t202c72 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x64e3e>\n \tb.n\t20281e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x649ea>\n \tnop\n \t...\n \tmovs\tr4, r4\n \tmovs\tr3, r5\n \t\t\t@ instruction: 0xf61e002a\n-\tands\tr4, r2\n+\tands\tr0, r4\n \tmovs\tr6, r3\n /usr/include/c++/10/bits/stl_vector.h:960\n \tsubs\tr2, r0, r2\n \tldr\tr3, [sp, #44]\t@ 0x2c\n \tadd.w\tr0, r4, #84\t@ 0x54\n \tbl\tac044 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x7eac>\n /usr/include/c++/10/bits/stl_vector.h:1046\n@@ -1029695,29 +1029694,29 @@\n \tblx\tb538 \n ./src/mira/contig_analysis.C:1654 (discriminator 9)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t202fba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x65186>\n \tb.n\t2030c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6528c>\n \tnop\n-\tstr\tr4, [sp, #192]\t@ 0xc0\n+\tstr\tr4, [sp, #224]\t@ 0xe0\n \tmovs\tr7, r3\n-\tstr\tr4, [sp, #128]\t@ 0x80\n+\tstr\tr4, [sp, #160]\t@ 0xa0\n \tmovs\tr7, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #752]\t@ 0x2f0\n+\tstr\tr3, [sp, #784]\t@ 0x310\n \tmovs\tr7, r3\n-\tstr\tr3, [sp, #760]\t@ 0x2f8\n+\tstr\tr3, [sp, #792]\t@ 0x318\n \tmovs\tr7, r3\n-\tstr\tr3, [sp, #216]\t@ 0xd8\n+\tstr\tr3, [sp, #248]\t@ 0xf8\n \tmovs\tr7, r3\n \t\t\t@ instruction: 0xf21c002a\n Contig::markFeaturesByConsensus(bool, bool, bool):\n ./src/mira/contig_analysis.C:3202\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr4, [pc, #2764]\t@ 203bc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x65d90>\n \tvpush\t{d8-d9}\n@@ -1031151,39 +1031150,39 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n-\tldrh\tr2, [r2, #44]\t@ 0x2c\n+\tldrh\tr2, [r3, #44]\t@ 0x2c\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr6, [r7, #42]\t@ 0x2a\n+\tldrh\tr6, [r0, #44]\t@ 0x2c\n \tmovs\tr7, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #5\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #28\n \tmovs\tr0, r0\n \tlsls\tr4, r0, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r7, #20]\n+\tldrh\tr4, [r0, #22]\n \tmovs\tr7, r3\n-\tldrh\tr0, [r7, #20]\n+\tldrh\tr0, [r0, #22]\n \tmovs\tr7, r3\n \tlsrs\tr4, r5, #28\n \tmovs\tr0, r0\n-\tldrsh\tr2, [r2, r7]\n+\tldrsh\tr6, [r3, r7]\n \tmovs\tr6, r3\n-\tldrh\tr4, [r6, #20]\n+\tldrh\tr4, [r7, #20]\n \tmovs\tr7, r3\n \tlsrs\tr4, r2, #1\n \tmovs\tr0, r0\n ./src/mira/contig_analysis.C:3346 (discriminator 1)\n \tcmp\tr0, #88\t@ 0x58\n \tbeq.w\t203f32 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x660fe>\n ./src/mira/contig_analysis.C:3354 (discriminator 5)\n@@ -1032854,33 +1032853,33 @@\n \tldr\tr3, [sp, #300]\t@ 0x12c\n \tmovs\tr2, #0\n \tstr\tr3, [sp, #4]\n \tstr\tr2, [sp, #8]\n \tb.n\t20433e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6650a>\n \tlsrs\tr4, r2, #1\n \tmovs\tr0, r0\n-\tstrh\tr4, [r5, #60]\t@ 0x3c\n+\tstrh\tr4, [r6, #60]\t@ 0x3c\n \tmovs\tr7, r3\n-\tstrh\tr0, [r6, #60]\t@ 0x3c\n+\tstrh\tr0, [r7, #60]\t@ 0x3c\n \tmovs\tr7, r3\n-\tstrh\tr6, [r5, #52]\t@ 0x34\n+\tstrh\tr6, [r6, #52]\t@ 0x34\n \tmovs\tr7, r3\n-\tstrh\tr4, [r4, #34]\t@ 0x22\n+\tstrh\tr4, [r5, #34]\t@ 0x22\n \tmovs\tr7, r3\n-\tstrh\tr2, [r1, #34]\t@ 0x22\n+\tstrh\tr2, [r2, #34]\t@ 0x22\n \tmovs\tr7, r3\n \tlsrs\tr0, r4, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #17\n \tmovs\tr0, r0\n-\tldr\tr4, [sp, #656]\t@ 0x290\n+\tldr\tr4, [sp, #688]\t@ 0x2b0\n \tmovs\tr7, r3\n-\tstrh\tr0, [r7, #18]\n+\tstrh\tr0, [r0, #20]\n \tmovs\tr7, r3\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tasrs\tr0, r2, #2\n \tmovs\tr0, r0\n@@ -1032904,29 +1032903,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r3, #16]\n \tmovs\tr2, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr4, [r5, #22]\n+\tldrb\tr4, [r6, #22]\n \tmovs\tr7, r3\n-\tldrb\tr0, [r5, #24]\n+\tldrb\tr0, [r6, #24]\n \tmovs\tr7, r3\n-\tstr\tr7, [sp, #200]\t@ 0xc8\n+\tstr\tr7, [sp, #232]\t@ 0xe8\n \tmovs\tr7, r3\n-\tldrb\tr4, [r3, #19]\n+\tldrb\tr4, [r4, #19]\n \tmovs\tr7, r3\n-\tldrb\tr0, [r5, #21]\n+\tldrb\tr0, [r6, #21]\n \tmovs\tr7, r3\n-\tldrb\tr2, [r6, #15]\n+\tldrb\tr2, [r7, #15]\n \tmovs\tr7, r3\n-\tldrb\tr0, [r4, #15]\n+\tldrb\tr0, [r5, #15]\n \tmovs\tr7, r3\n-\tldrb\tr6, [r7, #17]\n+\tldrb\tr6, [r0, #18]\n \tmovs\tr7, r3\n ./src/mira/contig_analysis.C:3210\n \tldr\tr6, [sp, #68]\t@ 0x44\n \tldrb.w\tr2, [r6, #1020]\t@ 0x3fc\n ./src/mira/contig_analysis.C:3209\n \tldr\tr1, [sp, #44]\t@ 0x2c\n \tcbz\tr1, 204882 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x66a4e>\n@@ -1033417,39 +1033416,39 @@\n /usr/include/c++/10/bits/stl_bvector.h:252\n \tmovs\tr2, #1\n \tlsl.w\tip, r2, lr\n ./src/mira/contig_analysis.C:3346\n \ttst.w\tip, r1\n \tbeq.w\t203bb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x65d7c>\n \tb.n\t204bac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x66d78>\n-\tldrb\tr0, [r6, #11]\n+\tldrb\tr0, [r7, #11]\n \tmovs\tr7, r3\n-\tldrb\tr4, [r3, #11]\n+\tldrb\tr4, [r4, #11]\n \tmovs\tr7, r3\n-\tldrb\tr4, [r1, #11]\n+\tldrb\tr4, [r2, #11]\n \tmovs\tr7, r3\n-\tmovs\tr2, #118\t@ 0x76\n+\tmovs\tr2, #130\t@ 0x82\n \tmovs\tr6, r3\n-\tmovs\tr2, #98\t@ 0x62\n+\tmovs\tr2, #110\t@ 0x6e\n \tmovs\tr6, r3\n-\tmovs\tr2, #90\t@ 0x5a\n+\tmovs\tr2, #102\t@ 0x66\n \tmovs\tr6, r3\n-\tasrs\tr6, r2\n+\tasrs\tr2, r4\n \tmovs\tr6, r3\n-\tmovs\tr2, #74\t@ 0x4a\n+\tmovs\tr2, #86\t@ 0x56\n \tmovs\tr6, r3\n-\tasrs\tr6, r0\n+\tasrs\tr2, r2\n \tmovs\tr6, r3\n-\tlsrs\tr6, r7\n+\tasrs\tr2, r1\n \tmovs\tr6, r3\n-\tlsrs\tr6, r6\n+\tasrs\tr2, r0\n \tmovs\tr6, r3\n-\tlsrs\tr6, r5\n+\tlsrs\tr2, r7\n \tmovs\tr6, r3\n-\tldr\tr2, [sp, #120]\t@ 0x78\n+\tldr\tr2, [sp, #168]\t@ 0xa8\n \tmovs\tr6, r3\n Contig::codonSingleBaseRepeatMarker(unsigned int, Contig::repeatmarker_stats_t&, std::vector >&):\n ./src/mira/contig_analysis.C:4383\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tcmp\tr1, #1\n \tldr.w\tr6, [pc, #2620]\t@ 20564c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x67818>\n \tvpush\t{d8-d9}\n@@ -1034902,21 +1034901,21 @@\n \tmovs\tr0, r0\n \tbmi.n\t2055e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x677b4>\n \tmovs\tr2, r5\n \tbmi.n\t205720 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x678ec>\n \tmovs\tr2, r5\n \tbcc.n\t2055c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x67794>\n \tmovs\tr2, r5\n-\tldrh\tr2, [r1, #40]\t@ 0x28\n+\tldrh\tr2, [r2, #40]\t@ 0x28\n \tmovs\tr7, r3\n-\tldrh\tr4, [r6, #38]\t@ 0x26\n+\tldrh\tr4, [r7, #38]\t@ 0x26\n \tmovs\tr7, r3\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tldrh\tr0, [r7, #36]\t@ 0x24\n+\tldrh\tr0, [r0, #38]\t@ 0x26\n \tmovs\tr7, r3\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tasrs\tr0, r6, #1\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tldr\tr7, [sp, #24]\n@@ -1035871,55 +1035870,55 @@\n \tb.n\t205d02 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x67ece>\n \tb.n\t205cf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x67ebc>\n \tnop\n \tstrb\tr2, [r4, #20]\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr0, [r2, #18]\n+\tstrh\tr0, [r3, #18]\n \tmovs\tr7, r3\n-\tstr\tr0, [r7, #84]\t@ 0x54\n+\tstr\tr0, [r0, #88]\t@ 0x58\n \tmovs\tr7, r3\n \tlsrs\tr0, r5, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #5\n \tmovs\tr0, r0\n-\tstrh\tr2, [r3, #16]\n+\tstrh\tr2, [r4, #16]\n \tmovs\tr7, r3\n \tlsrs\tr0, r3, #7\n \tmovs\tr0, r0\n-\tstr\tr4, [r3, #112]\t@ 0x70\n+\tstr\tr4, [r4, #112]\t@ 0x70\n \tmovs\tr7, r3\n \tstmia\tr6!, {r4, r6}\n \tmovs\tr2, r5\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tstrh\tr0, [r1, #32]\n \tmovs\tr2, r5\n \tlsrs\tr0, r5, #28\n \tmovs\tr0, r0\n-\tstrh\tr0, [r2, #12]\n+\tstrh\tr0, [r3, #12]\n \tmovs\tr7, r3\n \tasrs\tr4, r2, #1\n \tmovs\tr0, r0\n-\tstrh\tr4, [r7, #10]\n+\tstrh\tr4, [r0, #12]\n \tmovs\tr7, r3\n-\tldr\tr2, [r0, #4]\n+\tldr\tr2, [r1, #4]\n \tmovs\tr7, r3\n-\tldr\tr4, [r7, #0]\n+\tldr\tr4, [r0, #4]\n \tmovs\tr7, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr4, [r1, #124]\t@ 0x7c\n+\tstr\tr4, [r2, #124]\t@ 0x7c\n \tmovs\tr7, r3\n-\tlsrs\tr0, r6, #29\n+\tlsrs\tr4, r7, #29\n \tmovs\tr6, r3\n-\tstr\tr0, [r7, #120]\t@ 0x78\n+\tstr\tr0, [r0, #124]\t@ 0x7c\n \tmovs\tr7, r3\n \tstmia\tr4!, {r2, r6, r7}\n \tmovs\tr2, r5\n std::fill(std::_Bit_iterator, std::_Bit_iterator, bool const&):\n /usr/include/c++/10/bits/stl_bvector.h:435\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/stl_bvector.h:436\n@@ -1036851,15 +1036850,15 @@\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr4, [r5, #64]\t@ 0x40\n \tmovs\tr2, r5\n \tldr\tr4, [r1, #64]\t@ 0x40\n \tmovs\tr2, r5\n-\tstr\tr6, [r7, #32]\n+\tstr\tr6, [r0, #36]\t@ 0x24\n \tmovs\tr7, r3\n \tlsrs\tr4, r0, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1036997,15 +1036996,15 @@\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr0, [r5, #48]\t@ 0x30\n \tmovs\tr2, r5\n \tldr\tr0, [r1, #48]\t@ 0x30\n \tmovs\tr2, r5\n-\tstr\tr4, [r7, #16]\n+\tstr\tr4, [r0, #20]\n \tmovs\tr7, r3\n \tlsrs\tr4, r2, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1037397,21 +1037396,21 @@\n \tadd\tsp, #12\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n \tbx\tlr\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tldr\tr5, [sp, #632]\t@ 0x278\n+\tldr\tr5, [sp, #664]\t@ 0x298\n \tmovs\tr7, r3\n-\tstr\tr4, [r1, r2]\n+\tstr\tr4, [r2, r2]\n \tmovs\tr0, r4\n-\tldrh\tr2, [r2, #0]\n+\tldrh\tr6, [r3, #0]\n \tmovs\tr6, r3\n-\tstrh\tr6, [r7, #60]\t@ 0x3c\n+\tstrh\tr2, [r1, #62]\t@ 0x3e\n \tmovs\tr6, r3\n std::vector >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrd\tr4, r5, [r0]\n@@ -1037710,15 +1037709,15 @@\n \tmovw\tr8, #65532\t@ 0xfffc\n \tmovt\tr8, #32767\t@ 0x7fff\n \tb.n\t2069a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x68b74>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2069d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x68ba0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tcmp\tr3, #130\t@ 0x82\n+\tcmp\tr3, #142\t@ 0x8e\n \tmovs\tr6, r3\n std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t206b76 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x68d42>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1038640,15 +1038639,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t2070c6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x69292>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (207274 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x69440>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tmovs\tr2, #228\t@ 0xe4\n+\tmovs\tr2, #240\t@ 0xf0\n \tmovs\tr6, r3\n std::vector >, std::allocator > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t20741a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x695e6>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1039564,15 +1039563,15 @@\n \tmovw\tr5, #65528\t@ 0xfff8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t20796c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x69b38>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (207b20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x69cec>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tsubs\tr6, r6, r0\n+\tsubs\tr2, r0, r1\n \tmovs\tr6, r3\n void std::vector::Entry, std::allocator::Entry> >::_M_realloc_insert::Entry const&>(__gnu_cxx::__normal_iterator::Entry*, std::vector::Entry, std::allocator::Entry> > >, StringContainer::Entry const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #3221225472\t@ 0xc0000000\n@@ -1039721,15 +1039720,15 @@\n \tstrh.w\tip, [r8]\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t207b98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x69d64>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (207c7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x69e48>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tvshr.s32\td0, d13, #18\n+\tvshr.s32\td0, d13, #6\n std::vector::Entry, std::allocator::Entry> >::push_back(StringContainer::Entry const&):\n /usr/include/c++/10/bits/stl_vector.h:1189\n \tldrd\tr3, r2, [r0, #4]\n /usr/include/c++/10/bits/stl_vector.h:1187\n \tmov\tip, r0\n /usr/include/c++/10/bits/stl_vector.h:1189\n \tcmp\tr3, r2\n@@ -1040124,15 +1040123,15 @@\n \tmov\tr1, r5\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t207fa6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6a172>\n /usr/include/c++/10/bits/vector.tcc:485\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tstc\t0, cr0, [lr], {29}\n+\tldc\t0, cr0, [sl], {29}\n void std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > >::_M_realloc_insert<__gnu_cxx::__normal_iterator > > const&>(__gnu_cxx::__normal_iterator<__gnu_cxx::__normal_iterator > >*, std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > > >, __gnu_cxx::__normal_iterator > > const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #3758096384\t@ 0xe0000000\n \tldrd\tr7, r9, [r0]\n@@ -1040281,15 +1040280,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t208038 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6a204>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (208120 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6a2ec>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd.w\tr0, ip, sp, lsr #32\n+\tadds.w\tr0, r8, sp, lsr #32\n std::vector >::_M_insert_aux(std::_Bit_iterator, bool):\n /usr/include/c++/10/bits/vector.tcc:890\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n /usr/include/c++/10/bits/vector.tcc:893\n \tldr\tr6, [r0, #8]\n /usr/include/c++/10/bits/vector.tcc:890\n@@ -1040995,15 +1040994,15 @@\n \tldr\tr0, [pc, #16]\t@ (208600 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6a7cc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tmovw\tfp, #65532\t@ 0xfffc\n \tmovt\tfp, #4095\t@ 0xfff\n \tb.n\t208248 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6a414>\n \tnop\n-\tsubs\tr7, #250\t@ 0xfa\n+\tands\tr2, r0\n \tmovs\tr7, r3\n Contig::nngroups_t::nngroups_t(Contig::nngroups_t const&):\n ./src/mira/../../src/mira/contig.H:1024\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr5, r1\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr3, #0\n@@ -1041602,15 +1041601,15 @@\n \tmov\tr0, r5\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t208aa2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ac6e>\n /usr/include/c++/10/bits/vector.tcc:485\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tb.n\t208de4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6afb0>\n+\tb.n\t208dfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6afc8>\n \tmovs\tr5, r3\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, signed char&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldrd\tr9, r7, [r0]\n /usr/include/c++/10/bits/stl_vector.h:1758\n@@ -1041710,15 +1041709,15 @@\n \tcmp.w\tr9, #0\n \tbeq.n\t208b2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6acf8>\n \tb.n\t208b48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ad14>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (208b78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ad44>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tb.n\t208ce0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6aeac>\n+\tb.n\t208cf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6aec4>\n \tmovs\tr5, r3\n HDeque::hditer::dereference() const:\n ./src/mira/../../src/mira/hdeque.H:130\n \tldr\tr2, [pc, #244]\t@ (208c74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ae40>)\n \tldr\tr3, [pc, #248]\t@ (208c78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ae44>)\n \tpush\t{r4, r5, r6, r7, lr}\n \tadd\tr2, pc\n@@ -1041866,15 +1041865,15 @@\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmvns\tr2, r2\n \tmovs\tr2, r5\n \tbics\tr4, r3\n \tmovs\tr2, r5\n-\tvqadd.u32\td16, d8, d14\n+\tvqadd.u64\td16, d0, d14\n \tlsrs\tr4, r3, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter):\n@@ -1049657,85 +1049656,85 @@\n \tnop\n \tlsrs\tr4, r4, #24\n \tmovs\tr2, r5\n \tlsrs\tr4, r3, #24\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsls\tr0, r5, #18\n+\tlsls\tr0, r6, #18\n \tmovs\tr7, r3\n \tlsrs\tr6, r6, #23\n \tmovs\tr2, r5\n-\tlsls\tr0, r2, #18\n+\tlsls\tr0, r3, #18\n \tmovs\tr7, r3\n-\tsubs\tr4, r3, r7\n+\tsubs\tr4, r4, r7\n \tmovs\tr7, r3\n-\tasrs\tr6, r3, #19\n+\tasrs\tr6, r4, #19\n \tmovs\tr6, r4\n-\tcmp\tr0, #166\t@ 0xa6\n+\tcmp\tr0, #174\t@ 0xae\n \tmovs\tr7, r3\n-\tlsls\tr4, r6, #16\n+\tlsls\tr4, r7, #16\n \tmovs\tr7, r3\n-\tsubs\tr6, r2, r5\n+\tsubs\tr6, r3, r5\n \tmovs\tr7, r3\n-\tlsls\tr4, r7, #16\n+\tlsls\tr4, r0, #17\n \tmovs\tr7, r3\n-\tlsls\tr0, r2, #15\n+\tlsls\tr0, r3, #15\n \tmovs\tr7, r3\n-\tsubs\tr6, r2, r3\n+\tsubs\tr6, r3, r3\n \tmovs\tr7, r3\n-\tlsls\tr0, r2, #13\n+\tlsls\tr0, r3, #13\n \tmovs\tr7, r3\n-\tvqadd.u32\td16, d0, d14\n-\tldrb\tr4, [r3, #2]\n+\tvqadd.u32\td16, d8, d14\n+\tldrb\tr4, [r4, #2]\n \tmovs\tr1, r4\n-\tlsls\tr6, r2, #10\n+\tlsls\tr6, r3, #10\n \tmovs\tr7, r3\n-\tstmia\tr1!, {r1, r2, r4, r7}\n+\tstmia\tr1!, {r1, r2, r3, r4, r7}\n \tmovs\tr6, r3\n-\tlsls\tr6, r2, #9\n+\tlsls\tr6, r3, #9\n \tmovs\tr7, r3\n-\tadd\tr1, pc, #16\t@ (adr r1, 20c874 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ea40>)\n+\tadd\tr1, pc, #64\t@ (adr r1, 20c8a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ea70>)\n \tmovs\tr5, r3\n-\tlsls\tr0, r5, #6\n+\tlsls\tr0, r6, #6\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr0, r7, #7\n+\tlsls\tr0, r0, #8\n \tmovs\tr7, r3\n-\tlsls\tr0, r5, #8\n+\tlsls\tr0, r6, #8\n \tmovs\tr7, r3\n-\tlsls\tr4, r1, #8\n+\tlsls\tr4, r2, #8\n \tmovs\tr7, r3\n-\tlsls\tr6, r2, #7\n+\tlsls\tr6, r3, #7\n \tmovs\tr7, r3\n-\tlsls\tr2, r1, #7\n+\tlsls\tr2, r2, #7\n \tmovs\tr7, r3\n-\tlsls\tr2, r6, #6\n+\tlsls\tr2, r7, #6\n \tmovs\tr7, r3\n-\tlsls\tr6, r3, #6\n+\tlsls\tr6, r4, #6\n \tmovs\tr7, r3\n-\tlsls\tr4, r4, #5\n+\tlsls\tr4, r5, #5\n \tmovs\tr7, r3\n-\tlsls\tr2, r2, #5\n+\tlsls\tr2, r3, #5\n \tmovs\tr7, r3\n-\tlsls\tr0, r7, #4\n+\tlsls\tr0, r0, #5\n \tmovs\tr7, r3\n-\tlsls\tr6, r5, #4\n+\tlsls\tr6, r6, #4\n \tmovs\tr7, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tasrs\tr6, r6, #28\n+\tasrs\tr6, r7, #28\n \tmovs\tr7, r3\n-\tasrs\tr6, r3, #25\n+\tasrs\tr6, r4, #25\n \tmovs\tr7, r3\n-\tbkpt\t0x005a\n+\tbkpt\t0x0062\n \tmovs\tr6, r3\n-\tvqadd.u16\td0, d8, d14\n-\tldr\tr5, [sp, #760]\t@ 0x2f8\n+\tvqadd.u32\td0, d0, d14\n+\tldr\tr5, [sp, #808]\t@ 0x328\n \tmovs\tr5, r3\n AlignedDualSeq::isContained(int) const:\n ./src/mira/ads.C:2019\n \tmov\tr2, r0\n ./src/mira/ads.C:2020\n \tldrb.w\tr0, [r0, #75]\t@ 0x4b\n \tcbz\tr0, 20c8ca , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ea96>\n@@ -1050233,24 +1050232,24 @@\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr6, r5, #19\n \tmovs\tr2, r5\n \tlsls\tr2, r0, #19\n \tmovs\tr2, r5\n-\tstc2\t0, cr0, [sl, #-120]!\t@ 0xffffff88\n-\tldc2l\t0, cr0, [r8], {30}\n+\tldc2\t0, cr0, [r2, #-120]!\t@ 0xffffff88\n+\tstc2l\t0, cr0, [r0], #120\t@ 0x78\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstc2\t0, cr0, [ip], {30}\n-\tldc2l\t0, cr0, [lr], #-120\t@ 0xffffff88\n-\tstc2l\t0, cr0, [r4], {30}\n-\tldc2\t0, cr0, [sl], {30}\n+\tldc2\t0, cr0, [r4], {30}\n+\tstc2\t0, cr0, [r6], {30}\n+\tstc2l\t0, cr0, [ip], {30}\n+\tstc2\t0, cr0, [r2], #-120\t@ 0xffffff88\n AlignedDualSeq::getSequenceAtOverlapStart(int) const:\n ./src/mira/ads.C:1968\n \tldr\tr2, [pc, #420]\t@ (20cddc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6efa8>)\n \tpush\t{r4, r5, r6, lr}\n \tldr\tr3, [pc, #420]\t@ (20cde0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6efac>)\n \tadd\tr2, pc\n ./src/mira/ads.C:1970\n@@ -1050483,24 +1050482,24 @@\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr2, r3, #12\n \tmovs\tr2, r5\n \tlsls\tr2, r6, #11\n \tmovs\tr2, r5\n-\tsmmlar\tr0, r2, lr, r0\n-\t\t\t@ instruction: 0xfb98001e\n+\tsmmlar\tr0, sl, lr, r0\n+\t\t\t@ instruction: 0xfba0001e\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfab0001e\n-\tsmlawt\tr0, sl, lr, r0\n-\t\t\t@ instruction: 0xfaec001e\n-\t\t\t@ instruction: 0xfada001e\n+\t\t\t@ instruction: 0xfab8001e\n+\tsmlsdx\tr0, r2, lr, r0\n+\t\t\t@ instruction: 0xfaf4001e\n+\t\t\t@ instruction: 0xfae2001e\n AlignedDualSeq::getLenOfAlignedSequence(int) const:\n ./src/mira/ads.C:1995\n \tldr\tr2, [pc, #308]\t@ (20cf44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6f110>)\n \tpush\t{r4, r5, r6, lr}\n \tldr\tr3, [pc, #308]\t@ (20cf48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6f114>)\n \tadd\tr2, pc\n ./src/mira/ads.C:1997\n@@ -1050673,22 +1050672,22 @@\n \tmovs\tr2, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr2, r0, #5\n \tmovs\tr2, r5\n \tlsls\tr4, r3, #4\n \tmovs\tr2, r5\n-\tvst4.8\t{d16-d19}, [r0 :64], lr\n-\tldr??.w\tr0, [sl, #30]\n+\tvst4.8\t{d16-d19}, [r8 :64], lr\n+\t\t\t@ instruction: 0xfa02001e\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr??.w\tr0, [lr, lr, lsl #1]\n-\tldrsb.w\tr0, [ip, #30]\n+\tvst1.8\t\t\t@ instruction: 0xf986001e\n+\tvld1.8\t\t\t@ instruction: 0xf9a4001e\n AlignedDualSeq::calcEndsLenContiguousMatch():\n ./src/mira/ads.C:2036\n \tldr.w\tr2, [pc, #2268]\t@ 20d84c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6fa18>\n \tldr.w\tr3, [pc, #2268]\t@ 20d850 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6fa1c>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr4, [pc, #2264]\t@ 20d854 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6fa20>\n@@ -1051744,24 +1051743,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf2e6001e\n-\t\t\t@ instruction: 0xf286001e\n+\t\t\t@ instruction: 0xf2ee001e\n+\t\t\t@ instruction: 0xf28e001e\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf218001e\n-\t\t\t@ instruction: 0xf198001e\n-\tbics.w\tr0, sl, #30\n-\t\t\t@ instruction: 0xf120001e\n+\t\t\t@ instruction: 0xf220001e\n+\tsub.w\tr0, r0, #30\n+\torr.w\tr0, r2, #30\n+\t\t\t@ instruction: 0xf128001e\n AlignedDualSeq::saveMem(bool, bool):\n ./src/mira/ads.C:2148\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr5, r2\n \tldr\tr2, [pc, #244]\t@ (20d98c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6fb58>)\n \tldr\tr3, [pc, #248]\t@ (20d990 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6fb5c>)\n \tsub\tsp, #232\t@ 0xe8\n@@ -1051907,16 +1051906,16 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t20d970 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6fb3c>\n \tmovt\tr0, #26665\t@ 0x6829\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf6bc0029\n \t\t\t@ instruction: 0xf6720029\n-\tmrc\t0, 4, r0, cr6, cr14, {0}\n-\tvshr.s32\td16, d14, #16\n+\tmrc\t0, 4, r0, cr14, cr14, {0}\n+\tvshr.s32\td16, d14, #8\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n AlignedDualSeq::clipper(unsigned int, int, int&, int&) const:\n ./src/mira/ads.C:2192\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1052675,24 +1052674,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldc\t0, cr0, [sl, #-120]\t@ 0xffffff88\n-\tldcl\t0, cr0, [r6], #-120\t@ 0xffffff88\n+\tstc\t0, cr0, [r2, #-120]!\t@ 0xffffff88\n+\tldcl\t0, cr0, [lr], #-120\t@ 0xffffff88\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrd\tr0, r0, [lr, #120]!\t@ 0x78\n-\t\t\t@ instruction: 0xeb8a001e\n-\tsbcs.w\tr0, r8, lr, lsr #32\n-\teor.w\tr0, r4, lr, lsr #32\n+\tldrd\tr0, r0, [r6, #120]!\t@ 0x78\n+\t\t\t@ instruction: 0xeb92001e\n+\t\t\t@ instruction: 0xeb80001e\n+\teor.w\tr0, ip, lr, lsr #32\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #56]\t@ 0x38\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd\tr4, sp, #64\t@ 0x40\n \tcmp\tr0, r4\n \tbne.n\t20df92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7015e>\n ./src/mira/ads.C:2199 (discriminator 11)\n@@ -1054305,85 +1054304,85 @@\n \tb.n\t20eb82 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70d4e>\n \tvhadd.s16\td16, d4, d25\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvhadd.s8\td16, d8, d25\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #40\t@ (adr r5, 20ebd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70da0>)\n+\tadd\tr5, pc, #72\t@ (adr r5, 20ebf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70dc0>)\n+\tmovs\tr6, r3\n+\tand.w\tr0, r4, lr, lsr #32\n+\tbx\tsl\n \tmovs\tr6, r3\n-\tldrd\tr0, r0, [ip, #120]!\t@ 0x78\n \tbx\tr9\n \tmovs\tr6, r3\n-\tbx\tr8\n+\tbx\tr7\n \tmovs\tr6, r3\n-\tbx\tr6\n+\tbxns\tr5\n \tmovs\tr6, r3\n-\tbxns\tr4\n+\tbx\tr3\n \tmovs\tr6, r3\n \tbx\tr2\n \tmovs\tr6, r3\n-\tbx\tr1\n-\tmovs\tr6, r3\n-\tmov\tsl, pc\n+\tbx\tr0\n \tmovs\tr6, r3\n-\tmov\tip, sp\n+\tmov\tip, lr\n \tmovs\tr6, r3\n-\tmov\tlr, fp\n+\tmov\tlr, ip\n \tmovs\tr6, r3\n-\tmov\tr8, sl\n+\tmov\tr8, fp\n \tmovs\tr6, r3\n-\tmov\tsl, r8\n+\tmov\tsl, r9\n \tmovs\tr6, r3\n-\tmov\tsl, r6\n+\tmov\tsl, r7\n \tmovs\tr6, r3\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t20eb98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70d64>\n+\tb.n\t20eba8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70d74>\n \tmovs\tr6, r3\n-\tb.n\t20e8c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70a90>\n+\tb.n\t20e8d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70aa0>\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \torn\tr0, r2, r9, asr #32\n-\tb.n\t20e4b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7067c>\n+\tb.n\t20e4c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7068c>\n \tmovs\tr6, r3\n-\tb.n\t20e4a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70674>\n+\tb.n\t20e4b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70684>\n \tmovs\tr6, r3\n-\tb.n\t20e454 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70620>\n+\tb.n\t20e464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70630>\n \tmovs\tr6, r3\n-\tb.n\t20f3b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71584>\n+\tb.n\t20f3c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71594>\n \tmovs\tr6, r3\n-\tb.n\t20f3b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7157c>\n-\tmovs\tr6, r3\n-\tb.n\t20f21c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x713e8>\n+\tb.n\t20f3c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7158c>\n \tmovs\tr6, r3\n \tb.n\t20f22c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x713f8>\n \tmovs\tr6, r3\n-\tb.n\t20f044 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71210>\n+\tb.n\t20f23c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71408>\n+\tmovs\tr6, r3\n+\tb.n\t20f054 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71220>\n \tmovs\tr6, r3\n-\tb.n\t20f104 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x712d0>\n+\tb.n\t20f114 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x712e0>\n \tmovs\tr6, r3\n-\tb.n\t20ee74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71040>\n+\tb.n\t20ee84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71050>\n \tmovs\tr6, r3\n-\tb.n\t20eee0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x710ac>\n+\tb.n\t20eef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x710bc>\n \tmovs\tr6, r3\n-\tb.n\t20eca8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70e74>\n+\tb.n\t20ecb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70e84>\n \tmovs\tr6, r3\n ADSEstimator::calcNewEstimateFromSkim(int, unsigned int, unsigned int, int, int, signed char, signed char):\n ./src/mira/ads.C:2456\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n \tsub\tsp, #20\n \tldrsb.w\tr0, [sp, #48]\t@ 0x30\n@@ -1054568,19 +1054567,19 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t20f2cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71498>\n \tmovs\tr1, r5\n \tb.n\t20f294 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71460>\n \tmovs\tr1, r5\n-\tadds\tr3, #166\t@ 0xa6\n+\tadds\tr3, #174\t@ 0xae\n \tmovs\tr1, r4\n-\tudf\t#146\t@ 0x92\n+\tudf\t#154\t@ 0x9a\n \tmovs\tr6, r3\n-\tudf\t#128\t@ 0x80\n+\tudf\t#136\t@ 0x88\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ADSEstimator::getEstimatedRightExpand(int) const:\n ./src/mira/ads.C:2484\n@@ -1054713,19 +1054712,19 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t20f1c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71394>\n \tmovs\tr1, r5\n \tb.n\t20f190 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7135c>\n \tmovs\tr1, r5\n-\tadds\tr2, #162\t@ 0xa2\n+\tadds\tr2, #170\t@ 0xaa\n \tmovs\tr1, r4\n-\tble.n\t20edd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70fa0>\n+\tble.n\t20ede4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x70fb0>\n \tmovs\tr6, r3\n-\tble.n\t20ee34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71000>\n+\tble.n\t20ee44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71010>\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ADSEstimator::getLen(int) const:\n ./src/mira/ads.C:2496\n@@ -1054858,19 +1054857,19 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t20f0c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71290>\n \tmovs\tr1, r5\n \tb.n\t20f08c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71258>\n \tmovs\tr1, r5\n-\tadds\tr1, #158\t@ 0x9e\n+\tadds\tr1, #166\t@ 0xa6\n \tmovs\tr1, r4\n-\tbgt.n\t20eed0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7109c>\n+\tbgt.n\t20eee0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x710ac>\n \tmovs\tr6, r3\n-\tbgt.n\t20efb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7117c>\n+\tble.n\t20efc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7118c>\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n AlignedDualSeq::staticInitialiser():\n ./src/mira/ads.C:78\n@@ -1056203,17 +1056202,17 @@\n \tadds\tr1, #1\n \tblx\tb538 \n ./src/mira/ads.C:1530 (discriminator 9)\n \tmov\tr0, r6\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t20f96a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71b36>\n \tb.n\t20f9b6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71b82>\n-\tldmia\tr6!, {r2, r5, r7}\n+\tldmia\tr6!, {r2, r3, r5, r7}\n \tmovs\tr6, r3\n-\tbcc.n\t20fa68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71c34>\n+\tbcc.n\t20fa78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x71c44>\n \tmovs\tr6, r3\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tstr\tr0, [r4, #72]\t@ 0x48\n \tmovs\tr5, r3\n@@ -1057086,33 +1057085,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr7!, {r2}\n-\tmovs\tr6, r3\n \tldmia\tr7!, {r2, r3}\n \tmovs\tr6, r3\n-\tldmia\tr6, {r2, r3, r4, r6, r7}\n+\tldmia\tr7!, {r2, r4}\n+\tmovs\tr6, r3\n+\tldmia\tr6, {r2, r5, r6, r7}\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr6, {r2, r4, r5, r6, r7}\n+\tldmia\tr6, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr6, r3\n-\tldmia\tr5, {r3, r5, r6, r7}\n+\tldmia\tr5, {r4, r5, r6, r7}\n \tmovs\tr6, r3\n-\tldmia\tr6!, {r1, r4}\n+\tldmia\tr6!, {r1, r3, r4}\n \tmovs\tr6, r3\n-\tldmia\tr6!, {r5}\n+\tldmia\tr6!, {r3, r5}\n \tmovs\tr6, r3\n-\tldmia\tr4!, {r1, r5, r6, r7}\n+\tldmia\tr4!, {r1, r3, r5, r6, r7}\n \tmovs\tr6, r3\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #16]\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd\tr2, sp, #24\n \tcmp\tr0, r2\n \tbne.n\t2100b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7227c>\n@@ -1057628,15 +1057627,15 @@\n \tlsls\tr5, r5, #3\n \tb.n\t210490 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7265c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2104c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7268c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstr\tr0, [sp, #720]\t@ 0x2d0\n+\tstr\tr0, [sp, #768]\t@ 0x300\n \tmovs\tr5, r3\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n AlignedDualSeqFacts::serialiseIn(std::istream&):\n ./src/mira/adsfacts.C:84\n \tldr\tr2, [pc, #292]\t@ (2105f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x727bc>)\n \tldr\tr3, [pc, #296]\t@ (2105f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x727c0>)\n@@ -1058179,17 +1058178,17 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr7!, {r3, r4, r7}\n \tmovs\tr1, r5\n \tstmia\tr7!, {r1, r4, r5, r6}\n \tmovs\tr1, r5\n-\tstmia\tr0!, {r2, r3, r4}\n+\tstmia\tr0!, {r2, r5}\n \tmovs\tr6, r3\n-\tstmia\tr5!, {r1, r2, r3, r5, r6, r7}\n+\tstmia\tr5!, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n operator<<(std::ostream&, AlignedDualSeqFacts const&):\n ./src/mira/adsfacts.C:44\n@@ -1058454,41 +1058453,41 @@\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \tstmia\tr6!, {r2, r4, r7}\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tpop\t{r3, r5, r6, r7, pc}\n+\tpop\t{r4, r5, r6, r7, pc}\n \tmovs\tr6, r3\n-\tpop\t{r6, r7, pc}\n+\tpop\t{r3, r6, r7, pc}\n \tmovs\tr6, r3\n-\tstmia\tr5!, {r2, r3, r4, r6}\n+\tstmia\tr5!, {r2, r5, r6}\n \tmovs\tr6, r3\n-\tstmia\tr5!, {r2, r6}\n+\tstmia\tr5!, {r2, r3, r6}\n+\tmovs\tr6, r3\n+\tstmia\tr5!, {r2, r4, r5}\n \tmovs\tr6, r3\n \tstmia\tr5!, {r2, r3, r5}\n \tmovs\tr6, r3\n-\tstmia\tr5!, {r2, r5}\n+\tstmia\tr5!, {r5}\n \tmovs\tr6, r3\n-\tstmia\tr5!, {r3, r4}\n+\tstmia\tr5!, {r2, r4}\n \tmovs\tr6, r3\n \tstmia\tr5!, {r2, r3}\n \tmovs\tr6, r3\n \tstmia\tr5!, {r2}\n \tmovs\tr6, r3\n-\tstmia\tr4!, {r2, r3, r4, r5, r6, r7}\n+\tstmia\tr4!, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr6, r3\n-\tstmia\tr4!, {r1, r4, r5, r6, r7}\n-\tmovs\tr6, r3\n-\tstmia\tr4!, {r2, r3, r4, r6, r7}\n+\tstmia\tr4!, {r2, r5, r6, r7}\n \tmovs\tr6, r3\n-\tstmia\tr4!, {r2, r6, r7}\n+\tstmia\tr4!, {r2, r3, r6, r7}\n \tmovs\tr6, r3\n-\tstmia\tr4!, {r2, r4, r5, r7}\n+\tstmia\tr4!, {r2, r3, r4, r5, r7}\n \tmovs\tr6, r3\n \tstmia\tr4!, {r1, r2, r3, r5, r7}\n \tmovs\tr1, r5\n AlignedDualSeqFacts::serialiseOut(std::ostream&):\n ./src/mira/adsfacts.C:63\n \tldr\tr2, [pc, #376]\t@ (210c90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x72e5c>)\n \tldr\tr3, [pc, #380]\t@ (210c94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x72e60>)\n@@ -1058805,17 +1058804,17 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr2!, {r1, r4, r5, r7}\n \tmovs\tr1, r5\n \tstmia\tr2!, {r2, r3, r4, r7}\n \tmovs\tr1, r5\n-\tcbnz\tr0, 210dd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x72fa0>\n+\tcbnz\tr0, 210dd6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x72fa2>\n \tmovs\tr6, r3\n-\tstmia\tr2!, {r1, r3, r4, r5}\n+\tstmia\tr2!, {r1, r6}\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n AlignedDualSeqFacts::getOffsetInAlignment(int) const:\n ./src/mira/adsfacts.C:153\n@@ -1058945,17 +1058944,17 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr1!, {r2, r6, r7}\n \tmovs\tr1, r5\n \tstmia\tr1!, {r1, r3, r5, r7}\n \tmovs\tr1, r5\n-\trev16\tr0, r4\n+\trev16\tr0, r5\n \tmovs\tr6, r3\n-\tstmia\tr1!, {r4, r5, r6}\n+\tstmia\tr1!, {r3, r4, r5, r6}\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n AlignedDualSeqFacts::getRightOffsetInAlignment(int) const:\n ./src/mira/adsfacts.C:167\n@@ -1059080,17 +1059079,17 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr0!, {r1, r2, r3, r6, r7}\n \tmovs\tr1, r5\n \tstmia\tr0!, {r1, r4, r5, r7}\n \tmovs\tr1, r5\n-\tcbnz\tr4, 210f7e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7314a>\n+\tcbnz\tr4, 210f80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7314c>\n \tmovs\tr6, r3\n-\tstmia\tr0!, {r1, r6, r7}\n+\tstmia\tr0!, {r1, r3, r6, r7}\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n AlignedDualSeqFacts::getRightDelta(int) const:\n ./src/mira/adsfacts.C:229\n@@ -1059329,21 +1059328,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\titet\tls\n+\tittt\tls\n \tmovls\tr6, r3\n-\tit\thi\t@ unpredictable \n-\tmovhi\tr6, r3\n-\titee\tvc\n+\tnopls\t{9}\n+\tmovls\tr6, r3\n+\titte\tvc\n \tmovvc\tr6, r3\n-\tlsrvs\tr0, r0, #18\n+\tlsrvc\tr0, r0, #18\n \tmovvs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Align::~Align():\n ./src/mira/align.C:134\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n@@ -1059620,15 +1059619,15 @@\n ./src/mira/align.C:220\n \tpop\t{r4, pc}\n \tnop\n \tpop\t{r3, r4, r6}\n \tmovs\tr1, r5\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tpop\t{r2, r4, r5, pc}\n+\tpop\t{r2, r3, r4, r5, pc}\n \tmovs\tr6, r3\n Align::setRAlignParams():\n ./src/mira/align.C:288\n \tpush\t{r4, r5}\n \tmov\tr3, r0\n \tsub\tsp, #8\n ./src/mira/align.C:289\n@@ -1059764,23 +1059763,23 @@\n \tb.n\t21141e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x735ea>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tcbnz\tr0, 2114c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7368c>\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tpop\t{r1, r3, r4, r5, r7}\n+\tpop\t{r1, r6, r7}\n \tmovs\tr6, r3\n-\tpop\t{r1, r3, r4, r5, r7}\n+\tpop\t{r1, r6, r7}\n \tmovs\tr6, r3\n-\tpop\t{r4, r5, r7}\n+\tpop\t{r3, r4, r5, r7}\n \tmovs\tr6, r3\n-\tpop\t{r1, r2, r5, r7}\n+\tpop\t{r1, r2, r3, r5, r7}\n \tmovs\tr6, r3\n-\tpop\t{r5, r7}\n+\tpop\t{r3, r5, r7}\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Align::resetTimings():\n ./src/mira/align.C:942\n \tmovs\tr3, #0\n \tstr\tr3, [r0, #104]\t@ 0x68\n@@ -1060546,43 +1060545,43 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \trevsh\tr4, r0\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tpop\t{r1, r2}\n+\tpop\t{r1, r2, r3}\n \tmovs\tr6, r3\n-\tcbnz\tr2, 211b02 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cce>\n+\tcbnz\tr2, 211b04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cd0>\n \tmovs\tr6, r3\n-\tcbnz\tr0, 211afe , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cca>\n+\tcbnz\tr0, 211b00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73ccc>\n \tmovs\tr6, r3\n-\tcbnz\tr0, 211af8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cc4>\n+\tcbnz\tr0, 211afa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cc6>\n \tmovs\tr6, r3\n-\tcbnz\tr6, 211af2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cbe>\n+\tcbnz\tr6, 211af4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cc0>\n \tmovs\tr6, r3\n-\tcbnz\tr4, 211aee , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cba>\n+\tcbnz\tr4, 211af0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cbc>\n \tmovs\tr6, r3\n-\tcbnz\tr4, 211ae8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cb4>\n+\tcbnz\tr4, 211aea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cb6>\n \tmovs\tr6, r3\n-\tcbnz\tr2, 211ae4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cb0>\n+\tcbnz\tr2, 211ae6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cb2>\n \tmovs\tr6, r3\n-\trevsh\tr4, r3\n+\trevsh\tr4, r4\n \tmovs\tr6, r3\n-\thlt\t0x003a\n+\trevsh\tr2, r0\n \tmovs\tr6, r3\n-\thlt\t0x0018\n+\thlt\t0x0020\n \tmovs\tr6, r3\n-\trev16\tr0, r6\n+\trev16\tr0, r7\n \tmovs\tr6, r3\n-\trev16\tr6, r1\n+\trev16\tr6, r2\n \tmovs\tr6, r3\n-\trev\tr6, r3\n+\trev\tr6, r4\n \tmovs\tr6, r3\n-\tcbnz\tr4, 211afe , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73cca>\n+\trev\tr4, r0\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Align::prepareAlign(std::__cxx11::list >*):\n ./src/mira/align.C:230\n \tldr\tr2, [pc, #624]\t@ (211d38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73f04>)\n \tldr\tr3, [pc, #628]\t@ (211d3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x73f08>)\n@@ -1060934,17 +1060933,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpush\t{r1, r2, r3, r6, r7, lr}\n+\tpush\t{r1, r2, r4, r6, r7, lr}\n \tmovs\tr6, r3\n-\tpush\t{r1, r2, r4, r5, r6, r7, lr}\n+\tpush\t{r1, r2, r3, r4, r5, r6, r7, lr}\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Align::ra_expandRLEAlignments(char const*, char const*, bool):\n ./src/mira/align.C:856\n@@ -1061952,25 +1061951,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #976\t@ 0x3d0\n+\tadd\tr7, sp, #1008\t@ 0x3f0\n \tmovs\tr6, r3\n-\tadd\tr7, sp, #904\t@ 0x388\n+\tadd\tr7, sp, #936\t@ 0x3a8\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #448\t@ 0x1c0\n+\tadd\tr7, sp, #480\t@ 0x1e0\n \tmovs\tr6, r3\n-\tadd\tr6, sp, #936\t@ 0x3a8\n+\tadd\tr6, sp, #968\t@ 0x3c8\n \tmovs\tr6, r3\n Align::rAlign(unsigned int, unsigned int, char, bool):\n ./src/mira/align.C:523\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1648]\t@ 212b48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x74d14>\n \tldr.w\tr0, [pc, #1648]\t@ 212b4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x74d18>\n@@ -1062775,43 +1062774,43 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r6, #32\n \tmovs\tr0, r0\n \tadd\tr0, sp, #808\t@ 0x328\n \tmovs\tr1, r5\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #600\t@ 0x258\n+\tadd\tr4, sp, #632\t@ 0x278\n \tmovs\tr6, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #968\t@ 0x3c8\n+\tadd\tr3, sp, #1000\t@ 0x3e8\n \tmovs\tr6, r3\n-\tadd\tr3, sp, #840\t@ 0x348\n+\tadd\tr3, sp, #872\t@ 0x368\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #192\t@ 0xc0\n+\tadd\tr3, sp, #224\t@ 0xe0\n \tmovs\tr6, r3\n-\tadd\tr2, sp, #1000\t@ 0x3e8\n+\tadd\tr3, sp, #8\n \tmovs\tr6, r3\n-\tadd\tr2, sp, #984\t@ 0x3d8\n+\tadd\tr2, sp, #1016\t@ 0x3f8\n \tmovs\tr6, r3\n-\tadd\tr3, sp, #56\t@ 0x38\n+\tadd\tr3, sp, #88\t@ 0x58\n \tmovs\tr6, r3\n-\tadd\tr2, sp, #240\t@ 0xf0\n+\tadd\tr2, sp, #272\t@ 0x110\n \tmovs\tr6, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #152\t@ 0x98\n \tadd.w\tr8, sp, #88\t@ 0x58\n \tmov\tr0, sl\n \tblx\tbcc4 \n \tldr\tr0, [pc, #860]\t@ (212f08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x750d4>)\n@@ -1063214,23 +1063213,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr7, pc, #544\t@ (adr r7, 213140 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7530c>)\n+\tadd\tr7, pc, #576\t@ (adr r7, 213160 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7532c>)\n \tmovs\tr6, r3\n-\tadd\tr7, pc, #568\t@ (adr r7, 21315c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x75328>)\n+\tadd\tr7, pc, #600\t@ (adr r7, 21317c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x75348>)\n \tmovs\tr6, r3\n-\tadd\tr7, pc, #552\t@ (adr r7, 213150 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7531c>)\n+\tadd\tr7, pc, #584\t@ (adr r7, 213170 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7533c>)\n \tmovs\tr6, r3\n-\tadd\tr7, pc, #504\t@ (adr r7, 213124 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x752f0>)\n+\tadd\tr7, pc, #536\t@ (adr r7, 213144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x75310>)\n \tmovs\tr6, r3\n-\tadd\tr6, pc, #832\t@ (adr r6, 213270 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7543c>)\n+\tadd\tr6, pc, #864\t@ (adr r6, 213290 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7545c>)\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tb.n\t212eea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x750b6>\n \tb.n\t212eae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7507a>\n@@ -1064479,23 +1064478,23 @@\n \tmovs\tr0, r0\n \tldr\tr0, [sp, #344]\t@ 0x158\n \tmovs\tr1, r5\n \tstr\tr7, [sp, #824]\t@ 0x338\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [sp, #336]\t@ 0x150\n-\tmovs\tr6, r3\n \tldr\tr4, [sp, #368]\t@ 0x170\n \tmovs\tr6, r3\n-\tldr\tr4, [sp, #384]\t@ 0x180\n+\tldr\tr4, [sp, #400]\t@ 0x190\n+\tmovs\tr6, r3\n+\tldr\tr4, [sp, #416]\t@ 0x1a0\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr4, [sp, #80]\t@ 0x50\n+\tldr\tr4, [sp, #112]\t@ 0x70\n \tmovs\tr6, r3\n Align::pa_packSeqToRLE(char const*, unsigned int, std::__cxx11::basic_string, std::allocator >&, std::vector >&, int&):\n ./src/mira/align.C:815\n \tldr\tr0, [pc, #472]\t@ (213a7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x75c48>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n \tldr\tr3, [pc, #468]\t@ (213a80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x75c4c>)\n@@ -1066507,17 +1066506,17 @@\n \tadd\tr0, r1\n /usr/include/c++/10/bits/ios_base.h:170\n \tldr\tr1, [r0, #20]\n /usr/include/c++/10/bits/basic_ios.h:158\n \torr.w\tr1, r1, #1\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t21483a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x76a06>\n-\tldrh\tr6, [r2, #36]\t@ 0x24\n+\tldrh\tr6, [r3, #36]\t@ 0x24\n \tmovs\tr6, r3\n-\tldrh\tr6, [r2, #36]\t@ 0x24\n+\tldrh\tr6, [r3, #36]\t@ 0x24\n \tmovs\tr6, r3\n AssemblyInfo::huntForSmileCoverage(std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/assembly_info.C:470\n \tvldr\td7, [r0, #280]\t@ 0x118\n ./src/mira/assembly_info.C:466\n \tldr.w\tr2, [pc, #1232]\t@ 214d58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x76f24>\n \tldr.w\tr3, [pc, #1232]\t@ 214d5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x76f28>\n@@ -1067196,43 +1067195,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r3, #24]\n+\tldrh\tr2, [r4, #24]\n \tmovs\tr6, r3\n-\tldrh\tr2, [r1, #24]\n+\tldrh\tr2, [r2, #24]\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr0, [r2, #30]\n+\tldrh\tr0, [r3, #30]\n \tmovs\tr6, r3\n-\tldrh\tr4, [r1, #30]\n+\tldrh\tr4, [r2, #30]\n \tmovs\tr6, r3\n \tstrh\tr6, [r6, #22]\n \tmovs\tr1, r5\n-\tldrh\tr0, [r5, #6]\n+\tldrh\tr0, [r6, #6]\n \tmovs\tr6, r3\n-\tldrh\tr6, [r2, #6]\n+\tldrh\tr6, [r3, #6]\n \tmovs\tr6, r3\n-\tldrh\tr4, [r3, #6]\n+\tldrh\tr4, [r4, #6]\n \tmovs\tr6, r3\n-\tldrh\tr4, [r6, #14]\n+\tldrh\tr4, [r7, #14]\n \tmovs\tr6, r3\n-\tldrh\tr2, [r2, #4]\n+\tldrh\tr2, [r3, #4]\n \tmovs\tr6, r3\n-\tldrh\tr2, [r0, #4]\n+\tldrh\tr2, [r1, #4]\n \tmovs\tr6, r3\n-\tldrh\tr0, [r1, #4]\n+\tldrh\tr0, [r2, #4]\n \tmovs\tr6, r3\n-\tldrh\tr0, [r2, #8]\n+\tldrh\tr0, [r3, #8]\n \tmovs\tr6, r3\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #328]\t@ (214f00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x770cc>)\n \tmovs\tr2, #2\n \tmov\tr0, fp\n \tadd\tr1, pc\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n@@ -1067421,21 +1067420,21 @@\n \tb.n\t214e90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7705c>\n \tnop\n \tnop.w\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tstrh\tr6, [r7, #60]\t@ 0x3c\n+\tstrh\tr6, [r0, #62]\t@ 0x3e\n \tmovs\tr6, r3\n-\tstrh\tr6, [r5, #60]\t@ 0x3c\n+\tstrh\tr6, [r6, #60]\t@ 0x3c\n \tmovs\tr6, r3\n-\tstrh\tr4, [r6, #60]\t@ 0x3c\n+\tstrh\tr4, [r7, #60]\t@ 0x3c\n \tmovs\tr6, r3\n-\tstrh\tr4, [r4, #60]\t@ 0x3c\n+\tstrh\tr4, [r5, #60]\t@ 0x3c\n \tmovs\tr6, r3\n AssemblyInfo::setLargeContigCovPerST(unsigned int, unsigned char):\n ./src/mira/assembly_info.C:170\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, sl, lr}\n \tmov\tr5, r2\n \tldr\tr2, [pc, #432]\t@ (2150c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x77294>)\n \tldr\tr3, [pc, #432]\t@ (2150cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x77298>)\n@@ -1067676,17 +1067675,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r0, #14]\n+\tldrh\tr2, [r1, #14]\n \tmovs\tr6, r3\n-\tldrh\tr6, [r5, #12]\n+\tldrh\tr6, [r6, #12]\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n AssemblyInfo::zeroStats():\n ./src/mira/assembly_info.C:120\n@@ -1069019,15 +1069018,15 @@\n \tmovs\tr0, r0\n \tstrb\tr6, [r1, #23]\n \tmovs\tr1, r5\n \tstrb\tr0, [r5, #19]\n \tmovs\tr1, r5\n \tlsls\tr6, r6, #11\n \tmovs\tr5, r3\n-\tasrs\tr6, r0, #16\n+\tasrs\tr2, r2, #16\n \tmovs\tr5, r3\n AssemblyInfo::calcCurrentInfo():\n ./src/mira/assembly_info.C:183\n \tldr.w\tr2, [pc, #1452]\t@ 216118 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x782e4>\n \tldr.w\tr3, [pc, #1452]\t@ 21611c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x782e8>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1072298,124 +1072297,124 @@\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tldrsh\tr4, [r5, r6]\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsh\tr2, [r0, r6]\n \tmovs\tr1, r5\n-\tldr\tr4, [r3, #36]\t@ 0x24\n+\tldr\tr4, [r4, #36]\t@ 0x24\n \tmovs\tr6, r3\n-\tadd\tr4, pc, #920\t@ (adr r4, 217a10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x79bdc>)\n+\tadd\tr4, pc, #968\t@ (adr r4, 217a40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x79c0c>)\n \tmovs\tr5, r3\n-\tldr\tr2, [r2, #36]\t@ 0x24\n+\tldr\tr2, [r3, #36]\t@ 0x24\n \tmovs\tr6, r3\n \tlsrs\tr0, r7, #14\n \tmovs\tr0, r0\n-\tsbcs.w\tr0, r2, #10223616\t@ 0x9c0000\n-\tldr\tr0, [r4, #32]\n+\tsbcs.w\tr0, lr, #10223616\t@ 0x9c0000\n+\tldr\tr0, [r5, #32]\n \tmovs\tr6, r3\n-\tldr\tr0, [r2, #32]\n+\tldr\tr0, [r3, #32]\n \tmovs\tr6, r3\n-\tldr\tr4, [r3, #28]\n+\tldr\tr4, [r4, #28]\n \tmovs\tr6, r3\n-\tldr\tr2, [r4, #80]\t@ 0x50\n+\tldr\tr2, [r5, #80]\t@ 0x50\n \tmovs\tr6, r3\n-\tstr\tr3, [sp, #120]\t@ 0x78\n+\tstr\tr3, [sp, #152]\t@ 0x98\n \tmovs\tr0, r4\n-\tldr\tr2, [r6, #28]\n+\tldr\tr2, [r7, #28]\n \tmovs\tr6, r3\n-\tldr\tr0, [r7, #48]\t@ 0x30\n+\tldr\tr0, [r0, #52]\t@ 0x34\n \tmovs\tr6, r3\n-\tldr\tr6, [r3, #28]\n+\tldr\tr6, [r4, #28]\n \tmovs\tr6, r3\n-\tldr\tr6, [r7, #28]\n+\tldr\tr6, [r0, #32]\n \tmovs\tr6, r3\n-\tldr\tr0, [r1, #32]\n+\tldr\tr0, [r2, #32]\n \tmovs\tr6, r3\n-\tldr\tr6, [r0, #32]\n+\tldr\tr6, [r1, #32]\n \tmovs\tr6, r3\n-\tldr\tr2, [r4, #24]\n+\tldr\tr2, [r5, #24]\n \tmovs\tr6, r3\n-\tldr\tr6, [r4, #32]\n+\tldr\tr6, [r5, #32]\n \tmovs\tr6, r3\n-\tldr\tr4, [r1, #28]\n+\tldr\tr4, [r2, #28]\n \tmovs\tr6, r3\n-\tldr\tr6, [r4, #32]\n+\tldr\tr6, [r5, #32]\n \tmovs\tr6, r3\n-\tldr\tr4, [r7, #28]\n+\tldr\tr4, [r0, #32]\n \tmovs\tr6, r3\n-\tldr\tr4, [r6, #16]\n+\tldr\tr4, [r7, #16]\n \tmovs\tr6, r3\n-\tldr\tr0, [r0, #20]\n+\tldr\tr0, [r1, #20]\n \tmovs\tr6, r3\n-\tldr\tr0, [r4, #20]\n+\tldr\tr0, [r5, #20]\n \tmovs\tr6, r3\n-\tldr\tr2, [r4, #20]\n+\tldr\tr2, [r5, #20]\n \tmovs\tr6, r3\n-\tldr\tr4, [r4, #20]\n+\tldr\tr4, [r5, #20]\n \tmovs\tr6, r3\n-\tldr\tr2, [r4, #20]\n+\tldr\tr2, [r5, #20]\n \tmovs\tr6, r3\n-\tstr\tr0, [sp, #632]\t@ 0x278\n+\tstr\tr0, [sp, #664]\t@ 0x298\n \tmovs\tr0, r4\n-\tldr\tr0, [r4, #20]\n-\tmovs\tr6, r3\n-\tldr\tr0, [r4, #20]\n+\tldr\tr0, [r5, #20]\n \tmovs\tr6, r3\n-\tldr\tr4, [r7, #36]\t@ 0x24\n+\tldr\tr0, [r5, #20]\n \tmovs\tr6, r3\n-\tldr\tr6, [r3, #20]\n+\tldr\tr4, [r0, #40]\t@ 0x28\n \tmovs\tr6, r3\n-\tldr\tr4, [r0, #24]\n+\tldr\tr6, [r4, #20]\n \tmovs\tr6, r3\n \tldr\tr4, [r1, #24]\n \tmovs\tr6, r3\n-\tldr\tr2, [r2, #12]\n-\tmovs\tr6, r3\n-\tldr\tr6, [r6, #12]\n-\tmovs\tr6, r3\n-\tldr\tr2, [r0, #16]\n+\tldr\tr4, [r2, #24]\n \tmovs\tr6, r3\n-\tstr\tr4, [r2, #0]\n+\tldr\tr2, [r3, #12]\n \tmovs\tr6, r3\n \tldr\tr6, [r7, #12]\n \tmovs\tr6, r3\n-\tldrsh\tr4, [r5, r7]\n+\tldr\tr2, [r1, #16]\n+\tmovs\tr6, r3\n+\tstr\tr4, [r3, #0]\n \tmovs\tr6, r3\n \tldr\tr6, [r0, #16]\n \tmovs\tr6, r3\n-\tldrsh\tr4, [r0, r7]\n+\tldrsh\tr4, [r6, r7]\n \tmovs\tr6, r3\n \tldr\tr6, [r1, #16]\n \tmovs\tr6, r3\n-\tldrsh\tr6, [r3, r6]\n+\tldrsh\tr4, [r1, r7]\n \tmovs\tr6, r3\n \tldr\tr6, [r2, #16]\n \tmovs\tr6, r3\n-\tldrsh\tr6, [r6, r5]\n+\tldrsh\tr6, [r4, r6]\n \tmovs\tr6, r3\n-\tldr\tr4, [r2, #16]\n+\tldr\tr6, [r3, #16]\n \tmovs\tr6, r3\n-\tldrsh\tr6, [r1, r5]\n+\tldrsh\tr6, [r7, r5]\n \tmovs\tr6, r3\n-\tand.w\tr0, r2, #28\n-\tldrsh\tr0, [r2, r4]\n+\tldr\tr4, [r3, #16]\n \tmovs\tr6, r3\n-\tldrsh\tr2, [r0, r4]\n+\tldrsh\tr6, [r2, r5]\n+\tmovs\tr6, r3\n+\tand.w\tr0, lr, #28\n+\tldrsh\tr0, [r3, r4]\n+\tmovs\tr6, r3\n+\tldrsh\tr2, [r1, r4]\n \tmovs\tr6, r3\n-\tvshr.s32\td0, d12, #26\n+\tvshr.s32\td0, d12, #14\n \tldr\tr2, [r2, r5]\n \tmovs\tr1, r5\n-\tldrsh\tr6, [r0, r3]\n+\tldrsh\tr6, [r1, r3]\n \tmovs\tr6, r3\n-\tldrsh\tr0, [r7, r2]\n+\tldrsh\tr0, [r0, r3]\n \tmovs\tr6, r3\n-\tldrsh\tr2, [r5, r2]\n+\tldrsh\tr2, [r6, r2]\n \tmovs\tr6, r3\n-\tldrsh\tr4, [r3, r2]\n+\tldrsh\tr4, [r4, r2]\n \tmovs\tr6, r3\n operator<<(std::ostream&, AssemblyInfo&):\n ./src/mira/assembly_info.C:93\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n ./src/mira/assembly_info.C:96\n \tmov\tr0, r1\n@@ -1074068,15 +1074067,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t2183b2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7a57e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (218568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7a734>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tlsrs\tr0, r6, #31\n+\tlsrs\tr4, r7, #31\n \tmovs\tr5, r3\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, double const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #4026531840\t@ 0xf0000000\n@@ -1074183,15 +1074182,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t21861c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7a7e8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (21863c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7a808>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tb.n\t218220 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7a3ec>\n+\tb.n\t218238 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7a404>\n \tmovs\tr4, r3\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter > >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >):\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr7, r2\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tsubs\tr2, r1, r0\n@@ -1076314,39 +1076313,39 @@\n \tb.n\t2193c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b590>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tsubs\tr7, #26\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #632]\t@ (219834 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7ba00>)\n+\tldr\tr5, [pc, #664]\t@ (219854 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7ba20>)\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #72]\t@ (21960c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b7d8>)\n+\tldr\tr4, [pc, #104]\t@ (21962c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b7f8>)\n \tmovs\tr6, r3\n-\tldr\tr4, [pc, #16]\t@ (2195d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b7a4>)\n+\tldr\tr4, [pc, #48]\t@ (2195f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b7c4>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #832]\t@ (21990c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7bad8>)\n+\tldr\tr3, [pc, #864]\t@ (21992c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7baf8>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #672]\t@ (219870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7ba3c>)\n+\tldr\tr3, [pc, #704]\t@ (219890 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7ba5c>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #568]\t@ (21980c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b9d8>)\n+\tldr\tr3, [pc, #600]\t@ (21982c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b9f8>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #360]\t@ (219740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b90c>)\n+\tldr\tr3, [pc, #392]\t@ (219760 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b92c>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #256]\t@ (2196dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b8a8>)\n+\tldr\tr3, [pc, #288]\t@ (2196fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b8c8>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #184]\t@ (219698 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b864>)\n+\tldr\tr3, [pc, #216]\t@ (2196b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b884>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #184]\t@ (21969c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b868>)\n+\tldr\tr3, [pc, #216]\t@ (2196bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b888>)\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #240]\t@ (2196d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b8a4>)\n+\tldr\tr3, [pc, #272]\t@ (2196f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b8c4>)\n \tmovs\tr6, r3\n-\tldr\tr1, [pc, #632]\t@ (219864 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7ba30>)\n+\tldr\tr1, [pc, #664]\t@ (219884 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7ba50>)\n \tmovs\tr6, r3\n Assembly::priv_tmpcheckroutine(Contig&):\n ./src/mira/assembly_buildcontigs.C:1797\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr6, r1\n \tldr\tr5, [pc, #292]\t@ (219718 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b8e4>)\n /usr/include/c++/10/ostream:611\n@@ -1076518,19 +1076517,19 @@\n \tb.n\t21969c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b868>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tsubs\tr1, #104\t@ 0x68\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #8]\t@ (21972c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b8f8>)\n+\tldr\tr2, [pc, #40]\t@ (21974c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b918>)\n \tmovs\tr6, r3\n-\tldr\tr1, [pc, #1016]\t@ (219b20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7bcec>)\n+\tldr\tr2, [pc, #24]\t@ (219740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b90c>)\n \tmovs\tr6, r3\n-\tldr\tr1, [pc, #472]\t@ (219904 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7bad0>)\n+\tldr\tr1, [pc, #504]\t@ (219924 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7baf0>)\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n@@ -1077164,21 +1077163,21 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr7, #50\t@ 0x32\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmov\tr8, pc\n+\tbx\tr0\n \tmovs\tr6, r3\n-\tmov\tlr, r8\n+\tmov\tlr, r9\n \tmovs\tr6, r3\n-\tmov\tr8, r2\n+\tmov\tr8, r3\n \tmovs\tr6, r3\n-\tmov\tr4, fp\n+\tmov\tr4, ip\n \tmovs\tr6, r3\n \tadds\tr5, #42\t@ 0x2a\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n@@ -1077186,19 +1077185,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #944]\t@ 0x3b0\n+\tstr\tr4, [sp, #976]\t@ 0x3d0\n \tmovs\tr5, r3\n-\tadd\tr8, sl\n+\tadd\tr8, fp\n \tmovs\tr6, r3\n-\tadd\tlr, r5\n+\tadd\tlr, r6\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::bfc_savePersistentSmallOverlaps(Contig&, int, std::ostream&):\n ./src/mira/assembly_buildcontigs.C:1964\n@@ -1077958,27 +1077957,27 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr2, #118\t@ 0x76\n \tmovs\tr1, r5\n \tadds\tr2, #104\t@ 0x68\n \tmovs\tr1, r5\n-\tmuls\tr4, r7\n+\tbics\tr4, r0\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\torrs\tr2, r1\n+\torrs\tr2, r2\n \tmovs\tr6, r3\n-\torrs\tr0, r0\n+\torrs\tr0, r1\n \tmovs\tr6, r3\n-\tcmn\tr4, r0\n+\tcmn\tr4, r1\n \tmovs\tr6, r3\n-\tcmp\tr0, r0\n+\tcmp\tr0, r1\n \tmovs\tr6, r3\n-\ttst\tr0, r7\n+\tnegs\tr0, r0\n \tmovs\tr6, r3\n \tcmp\tr6, #244\t@ 0xf4\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1077986,17 +1077985,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr7, #36\t@ 0x24\n+\tsubs\tr7, #44\t@ 0x2c\n \tmovs\tr6, r3\n-\tsubs\tr7, #24\n+\tsubs\tr7, #32\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::bfc_trimDenovoIfNecessary(Contig&, bool, std::__cxx11::basic_string, std::allocator > const&, unsigned int&):\n ./src/mira/assembly_buildcontigs.C:1818\n@@ -1078405,31 +1078404,31 @@\n \t\t\t@ instruction: 0xffffffff\n \tcmp\tr4, #96\t@ 0x60\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr4, #62\t@ 0x3e\n \tmovs\tr1, r5\n-\tsubs\tr7, #154\t@ 0x9a\n+\tsubs\tr7, #162\t@ 0xa2\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr0, #240\t@ 0xf0\n+\tadds\tr0, #252\t@ 0xfc\n \tmovs\tr5, r3\n-\tadds\tr0, #234\t@ 0xea\n+\tadds\tr0, #246\t@ 0xf6\n \tmovs\tr5, r3\n-\tadds\tr0, #60\t@ 0x3c\n+\tadds\tr0, #72\t@ 0x48\n \tmovs\tr5, r3\n-\tsubs\tr6, #38\t@ 0x26\n+\tsubs\tr6, #46\t@ 0x2e\n \tmovs\tr6, r3\n-\tsubs\tr5, #174\t@ 0xae\n+\tsubs\tr5, #182\t@ 0xb6\n \tmovs\tr6, r3\n-\tsubs\tr5, #104\t@ 0x68\n+\tsubs\tr5, #112\t@ 0x70\n \tmovs\tr6, r3\n-\tsubs\tr3, #214\t@ 0xd6\n+\tsubs\tr3, #222\t@ 0xde\n \tmovs\tr6, r3\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tcmp\tr1, #64\t@ 0x40\n \tmovs\tr1, r5\n@@ -1079350,60 +1079349,60 @@\n \tb.n\t21ac8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7ce58>\n \tb.n\t21ad66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7cf32>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t21ad56 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7cf22>\n \tb.n\t21ad66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7cf32>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr5, #238\t@ 0xee\n+\tcmp\tr5, #250\t@ 0xfa\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xe80a001e\n-\tsubs\tr2, #58\t@ 0x3a\n+\t\t\t@ instruction: 0xe812001e\n+\tsubs\tr2, #66\t@ 0x42\n \tmovs\tr6, r3\n-\tsubs\tr2, #158\t@ 0x9e\n+\tsubs\tr2, #166\t@ 0xa6\n \tmovs\tr6, r3\n-\tsubs\tr2, #140\t@ 0x8c\n+\tsubs\tr2, #148\t@ 0x94\n \tmovs\tr6, r3\n-\tsubs\tr2, #36\t@ 0x24\n+\tsubs\tr2, #44\t@ 0x2c\n \tmovs\tr6, r3\n-\tsubs\tr2, #30\n+\tsubs\tr2, #38\t@ 0x26\n \tmovs\tr6, r3\n-\tsubs\tr1, #180\t@ 0xb4\n+\tsubs\tr1, #188\t@ 0xbc\n \tmovs\tr6, r3\n-\tb.n\t21a96c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7cb38>\n+\tb.n\t21a97c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7cb48>\n \tmovs\tr6, r3\n-\tsubs\tr1, #62\t@ 0x3e\n+\tsubs\tr1, #70\t@ 0x46\n \tmovs\tr6, r3\n-\tsubs\tr0, #128\t@ 0x80\n+\tsubs\tr0, #136\t@ 0x88\n \tmovs\tr6, r3\n-\tsubs\tr0, #112\t@ 0x70\n+\tsubs\tr0, #120\t@ 0x78\n \tmovs\tr6, r3\n-\tsubs\tr0, #16\n+\tsubs\tr0, #24\n \tmovs\tr6, r3\n-\tsubs\tr0, #136\t@ 0x88\n+\tsubs\tr0, #144\t@ 0x90\n \tmovs\tr6, r3\n-\tadds\tr6, #236\t@ 0xec\n+\tadds\tr6, #244\t@ 0xf4\n \tmovs\tr6, r3\n-\tadds\tr6, #222\t@ 0xde\n+\tadds\tr6, #230\t@ 0xe6\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr7, #14\n+\tadds\tr7, #22\n \tmovs\tr6, r3\n-\tadds\tr6, #254\t@ 0xfe\n+\tadds\tr7, #6\n \tmovs\tr6, r3\n-\tadds\tr7, #224\t@ 0xe0\n+\tadds\tr7, #232\t@ 0xe8\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr6, #164\t@ 0xa4\n+\tadds\tr6, #172\t@ 0xac\n \tmovs\tr6, r3\n-\tadds\tr5, #110\t@ 0x6e\n+\tadds\tr5, #118\t@ 0x76\n \tmovs\tr6, r3\n Assembly::bfc_moveSmallClustersToDebris():\n ./src/mira/assembly_buildcontigs.C:1637\n \tldr.w\tr1, [pc, #1548]\t@ 21b3e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7d5b4>\n \tldr.w\tr2, [pc, #1548]\t@ 21b3ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7d5b8>\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1080175,19 +1080174,19 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr1, #110\t@ 0x6e\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr5, #80\t@ 0x50\n+\tadds\tr5, #88\t@ 0x58\n \tmovs\tr6, r3\n-\tadds\tr4, #178\t@ 0xb2\n+\tadds\tr4, #186\t@ 0xba\n \tmovs\tr6, r3\n-\tadds\tr4, #164\t@ 0xa4\n+\tadds\tr4, #172\t@ 0xac\n \tmovs\tr6, r3\n \tmovs\tr0, #44\t@ 0x2c\n \tmovs\tr1, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1080195,30 +1080194,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t21bb10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dcdc>\n+\tb.n\t21bb28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dcf4>\n \tmovs\tr4, r3\n-\tb.n\t21bb0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dcd8>\n+\tb.n\t21bb24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dcf0>\n \tmovs\tr4, r3\n-\tvld1.8\t\t\t@ instruction: 0xf9ae001e\n+\tldrsh.w\tr0, [r6, #30]\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tb.n\t21b918 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dae4>\n+\tb.n\t21b930 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dafc>\n \tmovs\tr4, r3\n-\tb.n\t21b904 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dad0>\n+\tb.n\t21b91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7dae8>\n \tmovs\tr4, r3\n-\tlsrs\tr0, r6, #8\n+\tlsrs\tr0, r7, #8\n \tmovs\tr7, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tfp, sp, #152\t@ 0x98\n \tldr\tr6, [sp, #4]\n \tmov\tr0, fp\n@@ -1080631,30 +1080630,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t21b7a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7d970>\n+\tb.n\t21b7bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7d988>\n \tmovs\tr4, r3\n-\tb.n\t21b7a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7d96c>\n+\tb.n\t21b7b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7d984>\n \tmovs\tr4, r3\n-\tmovw\tr0, #43038\t@ 0xa81e\n+\t\t\t@ instruction: 0xf652001e\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tsvc\t18\n+\tsvc\t30\n \tmovs\tr4, r3\n-\tsvc\t6\n+\tsvc\t18\n \tmovs\tr4, r3\n-\tlsls\tr4, r2, #27\n+\tlsls\tr4, r3, #27\n \tmovs\tr7, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/sstream:584\n \tmov\tr0, r5\n /usr/include/c++/10/ostream:93\n \tadd\tr6, sp, #296\t@ 0x128\n@@ -1081269,30 +1081268,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbge.n\t21bd70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df3c>\n+\tbge.n\t21bd88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df54>\n \tmovs\tr4, r3\n-\tbge.n\t21bd6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df38>\n+\tbge.n\t21bd84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df50>\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xf0ae001e\n+\t\t\t@ instruction: 0xf0b6001e\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbls.n\t21bd78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df44>\n+\tbls.n\t21bd90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df5c>\n \tmovs\tr4, r3\n-\tbls.n\t21bd64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df30>\n+\tbls.n\t21bd7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7df48>\n \tmovs\tr4, r3\n-\tlsls\tr4, r5, #4\n+\tlsls\tr4, r6, #4\n \tmovs\tr7, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr5, [pc, #508]\t@ (21beb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7e07c>)\n \tadd.w\tsl, sp, #104\t@ 0x68\n \tldr\tr7, [sp, #8]\n@@ -1081558,15 +1081557,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #928\t@ (adr r6, 21c268 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7e434>)\n+\tadd\tr6, pc, #960\t@ (adr r6, 21c288 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7e454>)\n \tmovs\tr5, r3\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1083193,39 +1083192,39 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr2, r3, #1\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr4, #98\t@ 0x62\n+\tmovs\tr4, #106\t@ 0x6a\n \tmovs\tr6, r3\n-\tmovs\tr4, #20\n+\tmovs\tr4, #28\n \tmovs\tr6, r3\n-\tmovs\tr4, #56\t@ 0x38\n+\tmovs\tr4, #64\t@ 0x40\n \tmovs\tr6, r3\n-\tmovs\tr3, #242\t@ 0xf2\n+\tmovs\tr3, #250\t@ 0xfa\n \tmovs\tr6, r3\n-\tmovs\tr6, #34\t@ 0x22\n+\tmovs\tr6, #42\t@ 0x2a\n \tmovs\tr6, r3\n-\tmovs\tr4, #34\t@ 0x22\n+\tmovs\tr4, #42\t@ 0x2a\n \tmovs\tr6, r3\n-\tmovs\tr5, #62\t@ 0x3e\n+\tmovs\tr5, #70\t@ 0x46\n \tmovs\tr6, r3\n-\tmovs\tr3, #104\t@ 0x68\n+\tmovs\tr3, #112\t@ 0x70\n \tmovs\tr6, r3\n-\tmovs\tr3, #58\t@ 0x3a\n+\tmovs\tr3, #66\t@ 0x42\n \tmovs\tr6, r3\n-\tmovs\tr2, #254\t@ 0xfe\n+\tmovs\tr3, #6\n \tmovs\tr6, r3\n-\tmovs\tr0, #236\t@ 0xec\n+\tmovs\tr0, #244\t@ 0xf4\n \tmovs\tr6, r3\n-\tmovs\tr1, #252\t@ 0xfc\n+\tmovs\tr2, #4\n \tmovs\tr6, r3\n-\tmovs\tr2, #22\n+\tmovs\tr2, #30\n \tmovs\tr6, r3\n \tlsrs\tr6, r2, #16\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1083233,55 +1083232,55 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr0, #230\t@ 0xe6\n+\tmovs\tr0, #238\t@ 0xee\n \tmovs\tr6, r3\n-\tstrb\tr0, [r4, #30]\n+\tstrb\tr0, [r5, #30]\n \tmovs\tr0, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tmovs\tr0, #70\t@ 0x46\n+\tmovs\tr0, #78\t@ 0x4e\n \tmovs\tr6, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr2, r7, #4\n+\tsubs\tr2, r0, #5\n \tmovs\tr6, r3\n-\tsubs\tr2, r0, #0\n-\tmovs\tr6, r3\n-\tsubs\tr0, r0, #0\n+\tsubs\tr2, r1, #0\n \tmovs\tr6, r3\n \tsubs\tr0, r1, #0\n \tmovs\tr6, r3\n+\tsubs\tr0, r2, #0\n+\tmovs\tr6, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadds\tr0, r7, #2\n+\tadds\tr0, r0, #3\n \tmovs\tr6, r3\n-\tadds\tr2, r4, #2\n+\tadds\tr2, r5, #2\n \tmovs\tr6, r3\n-\tstrh\tr4, [r5, r3]\n+\tstrh\tr0, [r7, r3]\n \tmovs\tr5, r3\n-\tadds\tr0, r7, #1\n+\tadds\tr0, r0, #2\n \tmovs\tr6, r3\n-\tadds\tr0, r7, #0\n+\tadds\tr0, r0, #1\n \tmovs\tr6, r3\n-\tsubs\tr0, r6, r7\n+\tsubs\tr0, r7, r7\n \tmovs\tr6, r3\n-\tadds\tr4, r7, #0\n+\tadds\tr4, r0, #1\n \tmovs\tr6, r3\n-\tsubs\tr4, r4, r6\n+\tsubs\tr4, r5, r6\n \tmovs\tr6, r3\n-\tadd\tr0, pc, #544\t@ (adr r0, 21cef8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7f0c4>)\n+\tadd\tr0, pc, #592\t@ (adr r0, 21cf28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7f0f4>)\n \tmovs\tr4, r3\n-\tadd\tr0, pc, #536\t@ (adr r0, 21cef4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7f0c0>)\n+\tadd\tr0, pc, #584\t@ (adr r0, 21cf24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7f0f0>)\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/readpool.H:218\n \tmov\tr0, r9\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr.w\tsl, [pc, #472]\t@ 21cebc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7f088>\n@@ -1084935,45 +1084934,45 @@\n \tmovs\tr1, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr4, r4, #1\n \tmovs\tr1, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr2, r7, #27\n+\tasrs\tr2, r0, #28\n \tmovs\tr6, r3\n \tlsrs\tr4, r7, #1\n \tmovs\tr0, r0\n-\tasrs\tr0, r6, #17\n+\tasrs\tr0, r7, #17\n \tmovs\tr6, r3\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r2, r3, r4}\n+\tstmia\tr0!, {r3, r5}\n \tmovs\tr4, r3\n-\tasrs\tr4, r4, #7\n+\tasrs\tr4, r5, #7\n \tmovs\tr6, r3\n-\tasrs\tr2, r5, #3\n+\tasrs\tr2, r6, #3\n \tmovs\tr6, r3\n-\tldrb\tr4, [r0, #12]\n+\tldrb\tr4, [r1, #12]\n \tmovs\tr5, r3\n-\tldrb\tr6, [r1, #6]\n+\tldrb\tr6, [r2, #6]\n \tmovs\tr5, r3\n-\tlsrs\tr4, r0, #31\n+\tlsrs\tr4, r1, #31\n \tmovs\tr6, r3\n-\tldrb\tr4, [r4, #3]\n+\tldrb\tr4, [r5, #3]\n \tmovs\tr5, r3\n-\tlsrs\tr4, r5, #29\n+\tlsrs\tr4, r6, #29\n \tmovs\tr6, r3\n-\tlsrs\tr4, r7, #21\n+\tlsrs\tr4, r0, #22\n \tmovs\tr6, r3\n-\tpop\t{r2, r3, r4, r7}\n+\tpop\t{r3, r5, r7}\n \tmovs\tr4, r3\n-\tlsrs\tr4, r6, #22\n+\tlsrs\tr4, r7, #22\n \tmovs\tr6, r3\n ./src/mira/assembly_buildcontigs.C:2236 (discriminator 1)\n \tldr.w\tr0, [pc, #3116]\t@ 21e5c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80794>\n \tadd\tr0, pc\n \tbl\t218fd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b1a0>\n ./src/mira/assembly_buildcontigs.C:2238\n \tldr\tr3, [sp, #28]\n@@ -1086594,98 +1086593,98 @@\n ./src/mira/assembly_buildcontigs.C:2206 (discriminator 3)\n \tmov\tr0, r4\n \tblx\tb558 \n \tb.w\t21d518 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7f6e4>\n \tnop\n \tnop.w\n \t...\n-\tpop\t{r2, r4}\n+\tpop\t{r5}\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr0, r1, #24\n+\tlsrs\tr0, r2, #24\n \tmovs\tr6, r3\n-\tstrb\tr0, [r1, #28]\n+\tstrb\tr0, [r2, #28]\n \tmovs\tr5, r3\n-\tlsrs\tr0, r5, #22\n+\tlsrs\tr0, r6, #22\n \tmovs\tr6, r3\n-\tstrb\tr0, [r4, #24]\n+\tstrb\tr0, [r5, #24]\n \tmovs\tr5, r3\n-\trev16\tr0, r5\n+\trev16\tr4, r6\n \tmovs\tr4, r3\n-\tlsrs\tr2, r7, #19\n+\tlsrs\tr2, r0, #20\n \tmovs\tr6, r3\n \t\t\t@ instruction: 0xf37e0028\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb8fa\n+\tcbnz\tr6, 21e5fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x807c8>\n \tmovs\tr4, r3\n-\tlsrs\tr4, r1, #12\n+\tlsrs\tr4, r2, #12\n \tmovs\tr6, r3\n-\tstrb\tr4, [r6, #15]\n+\tstrb\tr4, [r7, #15]\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb80c\n+\t\t\t@ instruction: 0xb818\n \tmovs\tr4, r3\n-\tlsrs\tr0, r6, #4\n+\tlsrs\tr0, r7, #4\n \tmovs\tr6, r3\n-\tlsrs\tr0, r6, #2\n+\tlsrs\tr0, r7, #2\n \tmovs\tr6, r3\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r1, #8\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb6d2\n+\t\t\t@ instruction: 0xb6de\n \tmovs\tr4, r3\n-\tlsrs\tr2, r4, #1\n+\tlsrs\tr2, r5, #1\n \tmovs\tr6, r3\n-\tpush\t{lr}\n+\tpush\t{r2, r3, lr}\n \tmovs\tr4, r3\n-\tpop\t{r2, r6, r7}\n+\tpop\t{r4, r6, r7}\n \tmovs\tr4, r3\n-\tpush\t{r4, r6, r7}\n+\tpush\t{r2, r3, r4, r6, r7}\n \tmovs\tr4, r3\n-\tlsls\tr4, r3, #28\n+\tlsls\tr4, r4, #28\n \tmovs\tr6, r3\n-\tldr\tr4, [r0, #124]\t@ 0x7c\n+\tldr\tr4, [r1, #124]\t@ 0x7c\n \tmovs\tr5, r3\n-\tldr\tr2, [r6, #112]\t@ 0x70\n+\tldr\tr2, [r7, #112]\t@ 0x70\n \tmovs\tr5, r3\n-\tldr\tr0, [r2, #104]\t@ 0x68\n+\tldr\tr0, [r3, #104]\t@ 0x68\n \tmovs\tr5, r3\n-\tuxtb\tr6, r1\n+\tuxtb\tr2, r3\n \tmovs\tr4, r3\n-\tuxtb\tr4, r0\n+\tuxtb\tr0, r2\n \tmovs\tr4, r3\n-\tlsls\tr4, r7, #19\n+\tlsls\tr4, r0, #20\n \tmovs\tr6, r3\n-\tldr\tr4, [r7, #88]\t@ 0x58\n+\tldr\tr4, [r0, #92]\t@ 0x5c\n \tmovs\tr5, r3\n-\tldr\tr0, [r7, #84]\t@ 0x54\n+\tldr\tr0, [r0, #88]\t@ 0x58\n \tmovs\tr5, r3\n-\tcbz\tr4, 21e67a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80846>\n+\tcbz\tr0, 21e67e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8084a>\n \tmovs\tr4, r3\n-\tlsls\tr6, r5, #11\n+\tlsls\tr6, r6, #11\n \tmovs\tr6, r3\n-\tsub\tsp, #192\t@ 0xc0\n+\tsub\tsp, #240\t@ 0xf0\n \tmovs\tr4, r3\n-\tlsls\tr6, r2, #9\n+\tlsls\tr6, r3, #9\n \tmovs\tr6, r3\n-\tadd\tsp, #176\t@ 0xb0\n+\tadd\tsp, #224\t@ 0xe0\n \tmovs\tr4, r3\n-\tlsls\tr4, r4, #7\n+\tlsls\tr4, r5, #7\n \tmovs\tr6, r3\n ./src/mira/assembly_buildcontigs.C:2178\n \tcmp\tr3, #0\n \tbne.w\t21e7a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80972>\n ./src/mira/assembly_buildcontigs.C:2180\n \tadd\tr4, sp, #172\t@ 0xac\n \tadd\tr1, sp, #196\t@ 0xc4\n@@ -1087290,24 +1087289,24 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t21e894 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80a60>\n \tb.n\t21e894 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80a60>\n \tb.n\t21e8a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80a70>\n \tb.n\t21e894 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80a60>\n \tb.n\t21e8a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80a70>\n \tb.n\t21e8a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80a70>\n+\tadd\tr6, sp, #344\t@ 0x158\n+\tmovs\tr4, r3\n \tadd\tr6, sp, #296\t@ 0x128\n \tmovs\tr4, r3\n \tadd\tr6, sp, #248\t@ 0xf8\n \tmovs\tr4, r3\n-\tadd\tr6, sp, #200\t@ 0xc8\n-\tmovs\tr4, r3\n-\tvshr.u8\td0, d13, #6\n+\tvshr.u16\td0, d13, #14\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tvshr.u16\td0, d13, #12\n+\tvshr.u16\td0, d13, #4\n Assembly::saveDebrisAsContigs(unsigned int&, int, bool):\n ./src/mira/assembly_buildcontigs.C:1261\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr.w\tr4, [pc, #1296]\t@ 21ef88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x81154>\n \tvpush\t{d8-d12}\n \tsubw\tsp, sp, #1348\t@ 0x544\n@@ -1088003,32 +1088002,32 @@\n \tmovs\tr0, r5\n \tb.n\t21e930 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x80afc>\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmrrc2\t0, 1, r0, r0, cr13\t@ \n-\tldmia\tr3, {r1, r2, r3, r5, r6}\n+\tmrrc2\t0, 1, r0, r8, cr13\n+\tldmia\tr3!, {r1, r2, r4, r5, r6}\n \tmovs\tr6, r3\n-\tadds\tr4, r0, r2\n+\tadds\tr4, r1, r2\n \tmovs\tr6, r3\n-\tlsls\tr0, r4, #10\n+\tlsls\tr4, r5, #10\n \tmovs\tr5, r3\n-\tasrs\tr6, r7, #28\n+\tasrs\tr6, r0, #29\n \tmovs\tr6, r3\n-\tldmia\tr2, {r2, r3, r5}\n+\tldmia\tr2, {r2, r4, r5}\n \tmovs\tr6, r3\n-\tlsls\tr2, r6, #6\n+\tlsls\tr6, r7, #6\n \tmovs\tr5, r3\n-\tstr\tr7, [sp, #952]\t@ 0x3b8\n+\tstr\tr7, [sp, #984]\t@ 0x3d8\n \tmovs\tr5, r3\n \tb.n\t21f228 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x813f4>\n \tmovs\tr0, r5\n-\tlsls\tr6, r1, #4\n+\tlsls\tr2, r3, #4\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_bvector.h:843\n \tadd.w\tfp, sp, #76\t@ 0x4c\n \tadd.w\tip, sp, #60\t@ 0x3c\n \tldrd\tr0, r1, [fp]\n@@ -1088468,44 +1088467,44 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \t...\n-\tvqadd.u32\td0, d2, d12\n+\tvqadd.u32\td0, d14, d12\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #952\t@ (adr r3, 21f714 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x818e0>)\n+\tadd\tr3, pc, #1000\t@ (adr r3, 21f744 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x81910>)\n \tmovs\tr4, r3\n-\tadd\tr3, pc, #936\t@ (adr r3, 21f708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x818d4>)\n+\tadd\tr3, pc, #984\t@ (adr r3, 21f738 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x81904>)\n \tmovs\tr4, r3\n-\trev\tr6, r4\n+\trev\tr6, r5\n \tmovs\tr6, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #728\t@ (adr r2, 21f650 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8181c>)\n+\tadd\tr2, pc, #776\t@ (adr r2, 21f680 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8184c>)\n \tmovs\tr4, r3\n-\tadd\tr2, pc, #680\t@ (adr r2, 21f624 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x817f0>)\n+\tadd\tr2, pc, #728\t@ (adr r2, 21f654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x81820>)\n \tmovs\tr4, r3\n-\tldmia\tr2!, {r1, r3, r4, r5, r6}\n+\tldmia\tr2!, {r1, r7}\n \tmovs\tr6, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tb.n\t21f314 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x814e0>\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr\tr1, [r6, #8]\n /usr/include/c++/10/ext/new_allocator.h:133\n@@ -1090134,36 +1090133,36 @@\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbge.n\t22004c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x82218>\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf3fc001d\n-\tldmdb\tr2, {r0, r2, r3, r4}\n+\tand.w\tr0, r4, #10289152\t@ 0x9d0000\n+\tldmdb\tsl, {r0, r2, r3, r4}\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #14\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstcl\t0, cr0, [sl, #-116]\t@ 0xffffff8c\n-\tstcl\t0, cr0, [ip, #-116]\t@ 0xffffff8c\n-\t\t\t@ instruction: 0xead8001d\n-\torr.w\tr0, ip, sp, lsr #32\n-\t\t\t@ instruction: 0xf274001d\n+\tldcl\t0, cr0, [r2, #-116]\t@ 0xffffff8c\n+\tldcl\t0, cr0, [r4, #-116]\t@ 0xffffff8c\n+\t\t\t@ instruction: 0xeae0001d\n+\torrs.w\tr0, r4, sp, lsr #32\n+\t\t\t@ instruction: 0xf27c001d\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe98a001d\n+\t\t\t@ instruction: 0xe992001d\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, sp, #2224\t@ 0x8b0\n /usr/include/c++/10/ostream:391\n \tldr.w\tr6, [pc, #1276]\t@ 2205fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x827c8>\n /usr/include/c++/10/bits/basic_ios.h:462\n@@ -1090741,31 +1090740,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #256]\t@ 0x100\n+\tstr\tr3, [sp, #304]\t@ 0x130\n \tmovs\tr4, r3\n-\tstr\tr3, [sp, #232]\t@ 0xe8\n+\tstr\tr3, [sp, #280]\t@ 0x118\n \tmovs\tr4, r3\n-\tadd\tr1, sp, #464\t@ 0x1d0\n+\tadd\tr1, sp, #496\t@ 0x1f0\n \tmovs\tr6, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #112]\t@ 0x70\n+\tstr\tr2, [sp, #160]\t@ 0xa0\n \tmovs\tr4, r3\n-\tstr\tr2, [sp, #64]\t@ 0x40\n+\tstr\tr2, [sp, #112]\t@ 0x70\n \tmovs\tr4, r3\n-\tcbnz\tr0, 220668 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x82834>\n+\tcbnz\tr0, 22066a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x82836>\n \tmovs\tr6, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n@@ -1090773,15 +1090772,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r1, #8\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #24\t@ (adr r6, 220668 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x82834>)\n+\tadd\tr6, pc, #72\t@ (adr r6, 220698 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x82864>)\n \tmovs\tr4, r3\n ./src/mira/assembly_buildcontigs.C:304\n \tadd\tr5, sp, #280\t@ 0x118\n \tmovs\tr1, #0\n \tmov\tr0, r5\n \tvmov\ts18, r5\n \tblx\tb7f0 \n@@ -1092288,73 +1092287,73 @@\n \tldr.w\tr3, [sl, #212]\t@ 0xd4\n \tcmp\tr3, #1\n \tbhi.w\t222210 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x843dc>\n \tb.n\t221200 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833cc>\n \tnop\n \tnop.w\n \t...\n-\tb.n\t221674 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83840>\n+\tb.n\t221684 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83850>\n \tmovs\tr5, r3\n-\tb.n\t221620 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x837ec>\n+\tb.n\t221630 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x837fc>\n \tmovs\tr5, r3\n-\tb.n\t2214bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83688>\n+\tb.n\t2214cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83698>\n \tmovs\tr5, r3\n-\tb.n\t2213e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x835ac>\n+\tb.n\t2213f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x835bc>\n \tmovs\tr5, r3\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t2211e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833b0>\n+\tb.n\t2211f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833c0>\n \tmovs\tr5, r3\n-\tb.n\t2211d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833a4>\n+\tb.n\t2211e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833b4>\n \tmovs\tr5, r3\n-\tstrb\tr6, [r4, #7]\n+\tstrb\tr6, [r5, #7]\n \tmovs\tr5, r3\n-\tsvc\t42\t@ 0x2a\n+\tsvc\t50\t@ 0x32\n \tmovs\tr5, r3\n-\tldrsh\tr0, [r7, r5]\n+\tldrsh\tr4, [r0, r6]\n \tmovs\tr4, r3\n-\tstrb\tr2, [r7, #0]\n+\tstrb\tr2, [r0, #1]\n \tmovs\tr5, r3\n-\tble.n\t2210e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832b0>\n+\tble.n\t2210f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832c0>\n \tmovs\tr5, r3\n-\tble.n\t221170 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8333c>\n+\tble.n\t221180 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8334c>\n \tmovs\tr5, r3\n-\tble.n\t2210fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832c8>\n+\tble.n\t22110c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832d8>\n \tmovs\tr5, r3\n-\tble.n\t2210f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832bc>\n+\tble.n\t221100 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832cc>\n \tmovs\tr5, r3\n-\tble.n\t2212c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83490>\n+\tble.n\t2210d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832a0>\n \tmovs\tr5, r3\n-\tble.n\t221250 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8341c>\n+\tble.n\t221260 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8342c>\n \tmovs\tr5, r3\n-\tbgt.n\t2211d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8339c>\n+\tble.n\t2211e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833ac>\n \tmovs\tr5, r3\n-\tble.n\t22117c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83348>\n+\tble.n\t22118c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83358>\n \tmovs\tr5, r3\n-\tble.n\t2210f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832c4>\n+\tble.n\t221108 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832d4>\n \tmovs\tr5, r3\n-\tbgt.n\t2211d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833a0>\n+\tbgt.n\t2211e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833b0>\n \tmovs\tr5, r3\n-\tbgt.n\t221158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83324>\n+\tbgt.n\t221168 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83334>\n \tmovs\tr5, r3\n-\tbgt.n\t2210f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832c0>\n+\tbgt.n\t221104 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x832d0>\n \tmovs\tr5, r3\n-\tbgt.n\t22121c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833e8>\n+\tbgt.n\t22122c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x833f8>\n \tmovs\tr5, r3\n-\tblt.n\t221198 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83364>\n+\tblt.n\t2211a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83374>\n \tmovs\tr5, r3\n-\tblt.n\t2212e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x834b0>\n+\tblt.n\t2212f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x834c0>\n \tmovs\tr5, r3\n-\tblt.n\t22127c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83448>\n+\tblt.n\t22128c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83458>\n \tmovs\tr5, r3\n ./src/mira/assembly_buildcontigs.C:743\n \tldr\tr7, [sp, #60]\t@ 0x3c\n \tldrb.w\tr9, [r7, #2504]\t@ 0x9c8\n ./src/mira/assembly_buildcontigs.C:745\n \tcmp.w\tr9, #0\n \tbeq.w\t22133c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83508>\n@@ -1093987,91 +1093986,91 @@\n \tmov\tr0, r8\n \tadd\tr1, pc\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n \tb.w\t22169c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83868>\n \tnop\n \tnop.w\n \t...\n-\tbge.n\t221e3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84008>\n+\tbge.n\t221e4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84018>\n \tmovs\tr5, r3\n-\tbge.n\t221e30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83ffc>\n+\tbge.n\t221e40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8400c>\n \tmovs\tr5, r3\n-\tbge.n\t221fec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841b8>\n+\tbge.n\t221ffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841c8>\n \tmovs\tr5, r3\n-\tbls.n\t221ef4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840c0>\n+\tbls.n\t221f04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840d0>\n \tmovs\tr5, r3\n-\tbls.n\t221ef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840bc>\n+\tbls.n\t221f00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840cc>\n \tmovs\tr5, r3\n-\tbge.n\t221fa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8416c>\n+\tbge.n\t221fb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8417c>\n \tmovs\tr5, r3\n-\tbge.n\t221f5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84128>\n+\tbge.n\t221f6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84138>\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #20\n \tmovs\tr0, r0\n-\tbls.n\t221ee8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840b4>\n-\tmovs\tr5, r3\n-\tbls.n\t221e90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8405c>\n+\tbls.n\t221ef8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840c4>\n \tmovs\tr5, r3\n-\tbls.n\t221e50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8401c>\n+\tbls.n\t221ea0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8406c>\n \tmovs\tr5, r3\n-\tbls.n\t221f54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84120>\n+\tbls.n\t221e60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8402c>\n \tmovs\tr5, r3\n-\tbls.n\t221fa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84170>\n+\tbls.n\t221f64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84130>\n \tmovs\tr5, r3\n-\tbls.n\t221f60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8412c>\n+\tbls.n\t221fb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84180>\n \tmovs\tr5, r3\n-\tbhi.n\t221f0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840d8>\n+\tbls.n\t221f70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8413c>\n \tmovs\tr5, r3\n-\tbhi.n\t221efc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840c8>\n+\tbhi.n\t221f1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840e8>\n \tmovs\tr5, r3\n-\tbhi.n\t221ea4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84070>\n+\tbhi.n\t221f0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840d8>\n \tmovs\tr5, r3\n-\tbhi.n\t221ffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841c8>\n+\tbhi.n\t221eb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84080>\n \tmovs\tr5, r3\n-\tbhi.n\t222004 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841d0>\n+\tbhi.n\t22200c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841d8>\n \tmovs\tr5, r3\n \tbhi.n\t222014 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841e0>\n \tmovs\tr5, r3\n-\tbhi.n\t22200c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841d8>\n+\tbhi.n\t222024 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841f0>\n \tmovs\tr5, r3\n-\tbls.n\t22200c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841d8>\n+\tbhi.n\t22201c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841e8>\n \tmovs\tr5, r3\n-\tbls.n\t221fc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8418c>\n+\tbls.n\t22201c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841e8>\n \tmovs\tr5, r3\n \tbls.n\t221fd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8419c>\n \tmovs\tr5, r3\n-\tbls.n\t221f78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84144>\n+\tbls.n\t221fe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841ac>\n \tmovs\tr5, r3\n-\tbcs.n\t221f84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84150>\n+\tbls.n\t221f88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84154>\n+\tmovs\tr5, r3\n+\tbcs.n\t221f94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84160>\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tbcc.n\t221f8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84158>\n+\tbcc.n\t221f9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84168>\n \tmovs\tr5, r3\n-\tldr\tr6, [sp, #40]\t@ 0x28\n+\tldr\tr6, [sp, #72]\t@ 0x48\n \tmovs\tr5, r3\n-\tbmi.n\t221ff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841c0>\n+\tbmi.n\t222004 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841d0>\n \tmovs\tr5, r3\n-\tbne.n\t221fcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84198>\n+\tbne.n\t221fdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841a8>\n \tmovs\tr5, r3\n-\tbeq.n\t222074 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84240>\n+\tbeq.n\t221e84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84050>\n \tmovs\tr5, r3\n-\tbeq.n\t221eac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84078>\n+\tbeq.n\t221ebc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84088>\n \tmovs\tr5, r3\n-\tbeq.n\t221f14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840e0>\n+\tbeq.n\t221f24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840f0>\n \tmovs\tr5, r3\n-\tldmia\tr6, {r2, r3, r6}\n+\tldmia\tr6, {r2, r4, r6}\n \tmovs\tr5, r3\n-\tbeq.n\t221ed0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8409c>\n+\tbeq.n\t221ee0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x840ac>\n \tmovs\tr5, r3\n-\tbeq.n\t221f54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84120>\n+\tbeq.n\t221f64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84130>\n \tmovs\tr5, r3\n-\tbeq.n\t221fc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x84194>\n+\tbeq.n\t221fd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x841a4>\n \tmovs\tr5, r3\n-\tldmia\tr7, {r2, r3, r4, r6, r7}\n+\tldmia\tr7, {r2, r5, r6, r7}\n \tmovs\tr5, r3\n ./src/mira/assembly_buildcontigs.C:426\n \tvmov\tr0, s18\n \tmovs\tr1, #0\n \tblx\tb7f0 \n ./src/mira/assembly_buildcontigs.C:432\n \tldr.w\tr6, [sl, #316]\t@ 0x13c\n@@ -1095091,61 +1095090,61 @@\n \tmov\tr0, r8\n \tblx\tb39c (long)@plt>\n /usr/include/c++/10/ostream:113 (discriminator 2)\n \tblx\tbce0 >& std::endl >(std::basic_ostream >&)@plt+0x4>\n /usr/include/c++/10/ostream:113\n \tb.w\t22157a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x83746>\n \t...\n-\tldmia\tr1, {r1, r4}\n+\tldmia\tr1, {r1, r3, r4}\n \tmovs\tr5, r3\n-\tldmia\tr1!, {r4}\n+\tldmia\tr1!, {r3, r4}\n \tmovs\tr5, r3\n-\tldmia\tr3, {r1, r2, r3}\n+\tldmia\tr3!, {r1, r2, r4}\n \tmovs\tr5, r3\n-\tldmia\tr2!, {r1, r3, r4, r5, r6, r7}\n+\tldmia\tr3!, {r1}\n \tmovs\tr5, r3\n-\tasrs\tr2, r4, #24\n+\tasrs\tr2, r5, #24\n \tmovs\tr0, r4\n-\tldmia\tr4, {r2, r3, r4}\n+\tldmia\tr4!, {r2, r5}\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldmia\tr2!, {r1, r3, r4, r6}\n+\tldmia\tr2!, {r1, r5, r6}\n \tmovs\tr5, r3\n-\tasrs\tr6, r0, #21\n+\tasrs\tr6, r1, #21\n \tmovs\tr0, r4\n-\tldmia\tr2, {r2, r5, r6}\n+\tldmia\tr2, {r2, r3, r5, r6}\n \tmovs\tr5, r3\n-\tldmia\tr4, {r2, r3, r4, r6}\n+\tldmia\tr4!, {r2, r5, r6}\n \tmovs\tr5, r3\n-\tldmia\tr4!, {r1, r2, r5, r6}\n+\tldmia\tr4!, {r1, r2, r3, r5, r6}\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r2, r4}\n+\tstmia\tr7!, {r2, r3, r4}\n \tmovs\tr5, r3\n-\tstmia\tr7!, {r3, r4}\n+\tstmia\tr7!, {r5}\n \tmovs\tr5, r3\n-\tstmia\tr7!, {r1, r2, r4}\n+\tstmia\tr7!, {r1, r2, r3, r4}\n \tmovs\tr5, r3\n-\tstmia\tr5!, {r4}\n+\tstmia\tr5!, {r3, r4}\n \tmovs\tr5, r3\n-\tasrs\tr4, r1, #25\n+\tasrs\tr4, r2, #25\n \tmovs\tr0, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r5}\n+\tstmia\tr3!, {r3, r5}\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r1, r3, r4, r5, r7}\n+\tstmia\tr6!, {r1, r6, r7}\n \tmovs\tr5, r3\n-\tstmia\tr6!, {r1, r2, r3, r4, r6, r7}\n+\tstmia\tr6!, {r1, r2, r5, r6, r7}\n \tmovs\tr5, r3\n ./src/mira/assembly_buildcontigs.C:562 (discriminator 1)\n \tmov\tr0, r5\n \tbl\t219730 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x7b8fc>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #3148]\t@ 22343c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x85608>\n \tmovs\tr2, #38\t@ 0x26\n@@ -1096768,83 +1096767,83 @@\n \tadds\tr3, #1\n /usr/include/c++/10/bits/stl_vector.h:919 (discriminator 2)\n \tsubs\tr1, r7, r2\n ./src/mira/assembly_buildcontigs.C:1062 (discriminator 2)\n \tcmp\tr3, r1\n \tbcc.n\t2233e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x855b0>\n \tb.n\t223410 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x855dc>\n-\tstmia\tr3!, {r1, r3, r4}\n+\tstmia\tr3!, {r1, r5}\n \tmovs\tr5, r3\n-\tasrs\tr0, r6, #16\n+\tasrs\tr0, r7, #16\n \tmovs\tr0, r4\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstmia\tr1!, {}\n+\tstmia\tr1!, {r3}\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r2, r3, r4, r6}\n+\tstmia\tr6!, {r2, r5, r6}\n \tmovs\tr5, r3\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n-\titee\tge\n-\tmovge\tr5, r3\n-\tnoplt\t{10}\n+\titet\tlt\n \tmovlt\tr5, r3\n-\tstr\tr2, [sp, #760]\t@ 0x2f8\n+\tit\tge\t@ unpredictable \n+\tmovge\tr5, r3\n+\tstr\tr2, [sp, #792]\t@ 0x318\n \tmovs\tr6, r3\n-\tbkpt\t0x00f0\n+\tbkpt\t0x00f8\n \tmovs\tr5, r3\n-\tstmia\tr4!, {r1, r2, r3, r4, r5, r6, r7}\n+\tstmia\tr5!, {r1, r2}\n \tmovs\tr5, r3\n-\tstmia\tr5!, {r3, r4}\n+\tstmia\tr5!, {r5}\n \tmovs\tr5, r3\n-\tstmia\tr5!, {r2, r3, r4, r7}\n+\tstmia\tr5!, {r2, r5, r7}\n \tmovs\tr5, r3\n-\tstmia\tr5!, {r2, r3, r4, r6}\n+\tstmia\tr5!, {r2, r5, r6}\n \tmovs\tr5, r3\n-\tldmia\tr0!, {r3, r4, r7}\n+\tldmia\tr0!, {r5, r7}\n \tmovs\tr5, r3\n-\tldmia\tr1, {r1, r5, r6}\n+\tldmia\tr1, {r1, r3, r5, r6}\n \tmovs\tr5, r3\n-\tldmia\tr1!, {r2, r3, r6, r7}\n+\tldmia\tr1!, {r2, r4, r6, r7}\n \tmovs\tr5, r3\n-\tldmia\tr2!, {r3, r5, r6}\n+\tldmia\tr2!, {r4, r5, r6}\n \tmovs\tr5, r3\n-\tldmia\tr4, {r4, r6}\n+\tldmia\tr4, {r3, r4, r6}\n \tmovs\tr5, r3\n-\tldmia\tr4, {r1, r2, r3, r4}\n+\tldmia\tr4!, {r1, r2, r5}\n \tmovs\tr5, r3\n-\tldmia\tr3!, {r1, r2, r4, r5, r7}\n+\tldmia\tr3, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr5, r3\n-\tldmia\tr3, {r2, r3, r5, r7}\n+\tldmia\tr3!, {r2, r4, r5, r7}\n \tmovs\tr5, r3\n-\tldmia\tr3!, {r1, r5, r7}\n+\tldmia\tr3, {r1, r3, r5, r7}\n \tmovs\tr5, r3\n-\tldmia\tr3, {r3, r4, r7}\n+\tldmia\tr3!, {r5, r7}\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldr\tr4, [sp, #152]\t@ 0x98\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tpush\t{r1, r3, r5, r6, r7, lr}\n+\tpush\t{r1, r4, r5, r6, r7, lr}\n \tmovs\tr5, r3\n-\tpush\t{r1, r5, r6, r7, lr}\n+\tpush\t{r1, r3, r5, r6, r7, lr}\n \tmovs\tr5, r3\n-\tpop\t{r1, r3, r6, r7}\n+\tpop\t{r1, r4, r6, r7}\n \tmovs\tr5, r3\n-\tpop\t{r2, r3, r5, r6, r7}\n+\tpop\t{r2, r4, r5, r6, r7}\n \tmovs\tr5, r3\n ./src/mira/../../src/mira/readpool.H:218\n \tvmov\tr0, s23\n \tbl\t299f8 \n ./src/mira/../../src/mira/readgrouplib.H:110\n \tldrb.w\tr6, [r0, #151]\t@ 0x97\n ./src/mira/../../src/mira/readgrouplib.H:314\n@@ -1098548,69 +1098547,69 @@\n \tstr.w\tr7, [ip]\n \tb.n\t2241ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8637a>\n \tnop\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n-\tsubs\tr0, r0, r1\n+\tsubs\tr0, r1, r1\n \tmovs\tr5, r3\n-\tcbnz\tr4, 224222 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x863ee>\n+\tcbnz\tr4, 224224 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x863f0>\n \tmovs\tr5, r3\n-\tcbnz\tr6, 224226 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x863f2>\n+\tcbnz\tr6, 224228 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x863f4>\n \tmovs\tr5, r3\n-\tadd\tsp, #272\t@ 0x110\n+\tadd\tsp, #304\t@ 0x130\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb736\n+\t\t\t@ instruction: 0xb73e\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb6e8\n+\t\t\t@ instruction: 0xb6f0\n \tmovs\tr5, r3\n-\tcbz\tr4, 224216 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x863e2>\n+\tcbz\tr4, 224218 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x863e4>\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb6fe\n+\t\t\t@ instruction: 0xb706\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb7f2\n+\t\t\t@ instruction: 0xb7fa\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb7ae\n+\t\t\t@ instruction: 0xb7b6\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb702\n+\t\t\t@ instruction: 0xb70a\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb7e6\n+\t\t\t@ instruction: 0xb7ee\n \tmovs\tr5, r3\n-\tcbnz\tr2, 224248 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86414>\n+\tcbnz\tr2, 22424a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86416>\n \tmovs\tr5, r3\n-\tcbnz\tr0, 224240 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8640c>\n+\tcbnz\tr0, 224242 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8640e>\n \tmovs\tr5, r3\n-\tpop\t{r1}\n+\tpop\t{r1, r3}\n \tmovs\tr5, r3\n-\tpop\t{r2, r3, r6, r7}\n+\tpop\t{r2, r4, r6, r7}\n \tmovs\tr5, r3\n \tlsls\tr0, r6, #30\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb600\n+\t\t\t@ instruction: 0xb608\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb6c4\n+\t\t\t@ instruction: 0xb6cc\n \tmovs\tr5, r3\n-\trev\tr6, r2\n+\trev\tr6, r3\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb880\n+\t\t\t@ instruction: 0xb888\n \tmovs\tr5, r3\n-\trev\tr2, r7\n+\trev16\tr2, r0\n \tmovs\tr5, r3\n-\tcbz\tr2, 2242b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8647c>\n+\tcbz\tr2, 2242b2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8647e>\n \tmovs\tr5, r3\n-\tcbnz\tr0, 224248 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86414>\n+\tcbnz\tr0, 22424a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86416>\n \tmovs\tr5, r3\n-\tcbz\tr4, 2242c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86490>\n+\tcbz\tr4, 2242c6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86492>\n \tmovs\tr5, r3\n-\tpush\t{r1, r2, r3, r5, r7}\n+\tpush\t{r1, r2, r4, r5, r7}\n \tmovs\tr5, r3\n-\trevsh\tr4, r7\n+\tcbnz\tr4, 224290 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8645c>\n \tmovs\tr5, r3\n-\tcbnz\tr0, 2242a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8646c>\n+\tcbnz\tr0, 2242a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8646e>\n \tmovs\tr5, r3\n /usr/include/c++/10/bits/stl_algo.h:1844\n \tcmp\tr9, r0\n \tbeq.w\t2240e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x862ae>\n \tsub.w\tr9, r9, #4\n \tmov\tr5, r6\n \tb.n\t224278 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86444>\n@@ -1099624,29 +1099623,29 @@\n \tb.n\t22473c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86908>\n \tb.n\t22479a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86966>\n \tb.n\t22478a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x86956>\n \tsubs\tr2, r1, r2\n \tmovs\tr4, r3\n \tsubs\tr0, r7, r1\n \tmovs\tr4, r3\n-\tbx\tr7\n+\tbxns\tr8\n \tmovs\tr4, r3\n-\tbx\tr4\n+\tbx\tr6\n \tmovs\tr4, r3\n \tsubs\tr0, r3, r0\n \tmovs\tr4, r3\n-\tmov\tlr, pc\n+\tbx\tr1\n \tmovs\tr4, r3\n \tadds\tr0, r6, r7\n \tmovs\tr4, r3\n-\tmov\tip, ip\n+\tmov\tr8, lr\n \tmovs\tr4, r3\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tpush\t{r2, r3, r5, r6, r7}\n+\tpush\t{r2, r4, r5, r6, r7}\n \tmovs\tr5, r3\n Assembly::bfc_markRepReads(Contig&):\n ./src/mira/assembly_buildcontigs.C:1767\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/../../src/mira/multitag.H:103\n \tmovs\tr2, #0\n ./src/mira/assembly_buildcontigs.C:1767\n@@ -1100415,15 +1100414,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tlsls\tr0, r5, #24\n \tmovs\tr0, r0\n-\tsub\tsp, #224\t@ 0xe0\n+\tsub\tsp, #256\t@ 0x100\n \tmovs\tr5, r3\n \tstrh\tr6, [r5, #32]\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -1100433,27 +1100432,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #29\n+\tasrs\tr4, r6, #29\n \tmovs\tr5, r3\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbxns\tr4\n+\tbx\tr6\n \tmovs\tr4, r3\n-\tbx\tr3\n+\tbx\tr5\n \tmovs\tr4, r3\n-\tldrb\tr6, [r3, r5]\n+\tldrb\tr6, [r4, r5]\n \tmovs\tr6, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n newedges_t::sortComparatorByRIDUp(newedges_t const&, newedges_t const&):\n ./src/mira/../../src/mira/overlapedges.H:43\n \tldr\tr0, [r0, #0]\n \tldr\tr3, [r1, #0]\n@@ -1100579,15 +1100578,15 @@\n \tblx\tb2d4 <__stack_chk_fail@plt>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tldrb\tr6, [r0, #31]\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr2, [r2, #42]\t@ 0x2a\n+\tstrh\tr6, [r3, #42]\t@ 0x2a\n \tmovs\tr4, r3\n \tldrb\tr0, [r7, #30]\n \tmovs\tr0, r5\n \tldrb\tr6, [r4, #28]\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -1101441,15 +1101440,15 @@\n \tldr\tr0, [pc, #16]\t@ (2257bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x87988>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tmovw\tr6, #65520\t@ 0xfff0\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t2256cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x87898>\n \tnop\n-\tsubs\tr5, #166\t@ 0xa6\n+\tsubs\tr5, #178\t@ 0xb2\n \tmovs\tr4, r3\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t2258d6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x87aa2>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1101885,15 +1101884,15 @@\n \tmovw\tr6, #65528\t@ 0xfff8\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t225b56 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x87d22>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (225b80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x87d4c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tsubs\tr1, #214\t@ 0xd6\n+\tsubs\tr1, #226\t@ 0xe2\n \tmovs\tr4, r3\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::__cxx11::basic_string, std::allocator >::operator=(std::__cxx11::basic_string, std::allocator >&&) [clone .isra.0]:\n /usr/include/c++/10/bits/basic_string.h:703\n \tpush\t{r3, r4, r5, lr}\n /usr/include/c++/10/bits/basic_string.h:187\n@@ -1102392,19 +1102391,19 @@\n \tbne.n\t225e5a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x88026>\n ./src/mira/assembly_io.C:73\n \tpop\t{r3, r4, r5, r6, r7, pc}\n \tstrb\tr6, [r7, #4]\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #904\t@ (adr r0, 226208 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x883d4>)\n+\tadd\tr0, pc, #936\t@ (adr r0, 226228 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x883f4>)\n \tmovs\tr5, r3\n-\tadd\tr0, pc, #920\t@ (adr r0, 22621c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x883e8>)\n+\tadd\tr0, pc, #952\t@ (adr r0, 22623c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x88408>)\n \tmovs\tr5, r3\n-\tmovs\tr7, #164\t@ 0xa4\n+\tmovs\tr7, #172\t@ 0xac\n \tmovs\tr5, r3\n Assembly::buildDefaultCheckpointFileName(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly_io.C:1439\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr6, r2\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr\tr3, [r1, #0]\n@@ -1102589,19 +1102588,19 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t225fa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x88170>\n \tstrb\tr0, [r1, #3]\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #328]\t@ (22610c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x882d8>)\n+\tldr\tr4, [pc, #376]\t@ (22613c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x88308>)\n \tmovs\tr4, r3\n \tstrb\tr0, [r4, #0]\n \tmovs\tr0, r5\n-\tcmp\tr3, #114\t@ 0x72\n+\tcmp\tr3, #126\t@ 0x7e\n \tmovs\tr4, r3\n \tmcr2\t0, 3, r0, cr2, cr11, {0}\n Assembly::buildDefaultInfoFileName(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_io.C:1452\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr\tr4, [pc, #496]\t@ (2261c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x88394>)\n@@ -1103287,15 +1103286,15 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t22639c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x88568>\n \tb.n\t2263be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8858a>\n \tldr\tr0, [r0, #88]\t@ 0x58\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr4, [r5, #13]\n+\tldrb\tr4, [r6, #13]\n \tmovs\tr5, r3\n \tldr\tr0, [r1, #68]\t@ 0x44\n \tmovs\tr0, r5\n Assembly::getContigReadListFilename(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly_io.C:1517\n \tpush\t{r4, r5, r6, lr}\n \tldr\tr5, [pc, #132]\t@ (226468 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x88634>)\n@@ -1105578,33 +1105577,33 @@\n \tb.n\t227160 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8932c>\n \tb.n\t227216 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x893e2>\n \tb.n\t227160 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8932c>\n \tstr\tr4, [r6, #24]\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadds\tr3, #134\t@ 0x86\n+\tadds\tr3, #142\t@ 0x8e\n \tmovs\tr7, r3\n-\tldr\tr0, [r3, #120]\t@ 0x78\n+\tldr\tr0, [r4, #120]\t@ 0x78\n \tmovs\tr5, r3\n-\tadds\tr2, #242\t@ 0xf2\n+\tadds\tr2, #250\t@ 0xfa\n \tmovs\tr7, r3\n-\tldr\tr0, [r1, #112]\t@ 0x70\n+\tldr\tr0, [r2, #112]\t@ 0x70\n \tmovs\tr5, r3\n-\tadds\tr2, #106\t@ 0x6a\n+\tadds\tr2, #114\t@ 0x72\n \tmovs\tr7, r3\n-\tldr\tr0, [r0, #104]\t@ 0x68\n+\tldr\tr0, [r1, #104]\t@ 0x68\n \tmovs\tr5, r3\n \tldrsh\tr2, [r6, r5]\n \tmovs\tr0, r5\n-\tadds\tr1, #126\t@ 0x7e\n+\tadds\tr1, #134\t@ 0x86\n \tmovs\tr7, r3\n-\tadds\tr1, #36\t@ 0x24\n+\tadds\tr1, #44\t@ 0x2c\n \tmovs\tr7, r3\n-\tadds\tr0, #192\t@ 0xc0\n+\tadds\tr0, #200\t@ 0xc8\n \tmovs\tr7, r3\n Assembly::getFASTAFilename(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly_io.C:1957\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n \tldr\tr0, [pc, #140]\t@ (2272f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x894bc>)\n \tsub\tsp, #60\t@ 0x3c\n@@ -1105702,15 +1105701,15 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldrb\tr0, [r7, r3]\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr6, #230\t@ 0xe6\n+\tcmp\tr6, #242\t@ 0xf2\n \tmovs\tr4, r3\n \tldrb\tr4, [r3, r2]\n \tmovs\tr0, r5\n Assembly::getFASTAPaddedFilename(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly_io.C:1964\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n@@ -1105810,15 +1105809,15 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldrb\tr4, [r2, r1]\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr6, #66\t@ 0x42\n+\tcmp\tr6, #78\t@ 0x4e\n \tmovs\tr4, r3\n \tldrh\tr0, [r7, r7]\n \tmovs\tr0, r5\n Assembly::saveAsFASTA(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_io.C:1972\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -1106038,19 +1106037,19 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t2274ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x896b8>\n \tldrh\tr4, [r5, r6]\n \tmovs\tr0, r5\n-\tcmp\tr5, #158\t@ 0x9e\n+\tcmp\tr5, #170\t@ 0xaa\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr5, #44\t@ 0x2c\n+\tcmp\tr5, #56\t@ 0x38\n \tmovs\tr4, r3\n \tldrh\tr0, [r0, r3]\n \tmovs\tr0, r5\n Assembly::saveStrainsAsFASTAQUAL(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_io.C:1987\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr5, r2\n@@ -1107650,15 +1107649,15 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tstr\tr0, [r3, r4]\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr2, [r4, #6]\n+\tstrh\tr2, [r5, #6]\n \tmovs\tr5, r3\n \tstr\tr6, [r6, r2]\n \tmovs\tr0, r5\n Assembly::saveAsGAP4DA(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_io.C:2163\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n@@ -1107792,15 +1107791,15 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr\tr1, [sp, #60]\t@ 0x3c\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t227fa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a16c>\n-\tstrh\tr4, [r7, #0]\n+\tstrh\tr4, [r0, #2]\n \tmovs\tr5, r3\n \tstr\tr4, [r3, r1]\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr7, [pc, #928]\t@ (228364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a530>)\n \tmovs\tr0, r5\n@@ -1107904,15 +1107903,15 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldr\tr7, [pc, #576]\t@ (22829c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a468>)\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [r1, r2]\n+\tldr\tr6, [r2, r2]\n \tmovs\tr4, r3\n \tldr\tr7, [pc, #208]\t@ (228138 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a304>)\n \tmovs\tr0, r5\n Assembly::saveAsHTML(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_io.C:2186\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -1108132,23 +1108131,23 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t2281a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a370>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrsb\tr2, [r3, r7]\n+\tldrsb\tr6, [r4, r7]\n \tmovs\tr4, r3\n \tldr\tr6, [pc, #832]\t@ (228524 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a6f0>)\n \tmovs\tr0, r5\n \tldr\tr6, [pc, #752]\t@ (2284d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a6a4>)\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr2, [r1, #25]\n+\tldrb\tr2, [r2, #25]\n \tmovs\tr5, r3\n \tldr\tr5, [pc, #1016]\t@ (2285ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a7b8>)\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n@@ -1108410,16 +1108409,16 @@\n \tmovs\tr0, r0\n \tldr\tr4, [pc, #480]\t@ (2285cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a798>)\n \tmovs\tr0, r5\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tldr\tr4, [pc, #312]\t@ (22852c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a6f8>)\n \tmovs\tr0, r5\n-\tldmia.w\tr2!, {r0, r1, r3, r4}\n-\tldmia.w\tr0!, {r0, r1, r3, r4}\n+\tldmia.w\tlr!, {r0, r1, r3, r4}\n+\tldmia.w\tip!, {r0, r1, r3, r4}\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::dumpRailReads(std::basic_ofstream >&):\n@@ -1108638,19 +1108637,19 @@\n \tmovs\tr0, r0\n \tldr\tr3, [pc, #192]\t@ (228670 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8a83c>)\n \tmovs\tr0, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldr\tr2, [pc, #880]\t@ (228928 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8aaf4>)\n \tmovs\tr0, r5\n-\tasrs\tr6, r0, #1\n+\tasrs\tr2, r2, #1\n \tmovs\tr4, r3\n-\tasrs\tr2, r7, #32\n+\tasrs\tr6, r0, #1\n \tmovs\tr4, r3\n-\tsubs\tr0, #10\n+\tsubs\tr0, #18\n \tmovs\tr6, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1109252,58 +1109251,58 @@\n \tb.n\t228a16 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8abe2>\n \tldr\tr1, [pc, #544]\t@ (228c70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8ae3c>)\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr1, [pc, #464]\t@ (228c28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8adf4>)\n \tmovs\tr0, r5\n-\tldrb\tr6, [r0, #5]\n+\tldrb\tr6, [r1, #5]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r4, r5]\n+\tstrb\tr2, [r6, r5]\n \tmovs\tr4, r3\n-\tlsrs\tr0, r7, #7\n+\tlsrs\tr0, r0, #8\n \tmovs\tr5, r3\n \tldr\tr0, [pc, #296]\t@ (228b90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8ad5c>)\n \tmovs\tr0, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tlsrs\tr4, r6, #21\n+\tlsrs\tr0, r0, #22\n \tmovs\tr4, r3\n-\tlsrs\tr0, r6, #21\n+\tlsrs\tr4, r7, #21\n \tmovs\tr4, r3\n-\tmovs\tr3, #172\t@ 0xac\n+\tmovs\tr3, #180\t@ 0xb4\n \tmovs\tr6, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr2, [r2, r5]\n+\tstrh\tr6, [r3, r5]\n \tmovs\tr4, r3\n-\tstrb\tr4, [r3, #29]\n+\tstrb\tr4, [r4, #29]\n \tmovs\tr5, r3\n-\tldc2\t0, cr0, [r6, #-112]\t@ 0xffffff90\n-\tstrb\tr6, [r7, #25]\n+\tldc2\t0, cr0, [lr, #-112]\t@ 0xffffff90\n+\tstrb\tr6, [r0, #26]\n \tmovs\tr5, r3\n-\tstrb\tr4, [r2, #27]\n+\tstrb\tr4, [r3, #27]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r7, #27]\n+\tstrb\tr6, [r0, #28]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r3, #29]\n+\tstrb\tr6, [r4, #29]\n \tmovs\tr5, r3\n-\tstrb\tr0, [r2, #28]\n+\tstrb\tr0, [r3, #28]\n \tmovs\tr5, r3\n-\tstrb\tr0, [r1, #26]\n+\tstrb\tr0, [r2, #26]\n \tmovs\tr5, r3\n-\tstrb\tr4, [r0, #26]\n+\tstrb\tr4, [r1, #26]\n \tmovs\tr5, r3\n-\tstrb\tr2, [r3, #26]\n+\tstrb\tr2, [r4, #26]\n \tmovs\tr5, r3\n Assembly::basicReadGroupChecks():\n ./src/mira/assembly_io.C:744\n \tldr.w\tr1, [pc, #2600]\t@ 2294e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8b6ac>\n \tldr.w\tr2, [pc, #2600]\t@ 2294e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8b6b0>\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1110708,83 +1110707,83 @@\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tsl, r2\n \tmovs\tr0, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr0, [r0, r2]\n+\tstr\tr4, [r1, r2]\n \tmovs\tr4, r3\n-\tstrb\tr2, [r7, #22]\n+\tstrb\tr2, [r0, #23]\n \tmovs\tr5, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstrb\tr2, [r7, #20]\n+\tstrb\tr2, [r0, #21]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r3, #20]\n+\tstrb\tr6, [r4, #20]\n \tmovs\tr5, r3\n-\tstrb\tr4, [r2, #18]\n+\tstrb\tr4, [r3, #18]\n \tmovs\tr5, r3\n-\tstrb\tr2, [r6, #20]\n+\tstrb\tr2, [r7, #20]\n \tmovs\tr5, r3\n-\tstrb\tr4, [r0, #20]\n+\tstrb\tr4, [r1, #20]\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r0, #20]\n+\tstrb\tr0, [r1, #20]\n \tmovs\tr5, r3\n-\tstrb\tr0, [r1, #13]\n+\tstrb\tr0, [r2, #13]\n \tmovs\tr5, r3\n-\tstrb\tr0, [r4, #19]\n+\tstrb\tr0, [r5, #19]\n \tmovs\tr5, r3\n-\tldr\tr0, [pc, #896]\t@ (2298a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8ba70>)\n+\tldr\tr0, [pc, #928]\t@ (2298c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8ba90>)\n \tmovs\tr5, r3\n-\tstrb\tr2, [r6, #27]\n+\tstrb\tr2, [r7, #27]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r3, #26]\n+\tstrb\tr6, [r4, #26]\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr6, [r1, #4]\n+\tstrb\tr6, [r2, #4]\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tsubs\tr7, #80\t@ 0x50\n \tmovs\tr0, r5\n-\tstrb\tr2, [r4, #3]\n+\tstrb\tr2, [r5, #3]\n \tmovs\tr5, r3\n-\tstrb\tr2, [r1, #3]\n+\tstrb\tr2, [r2, #3]\n \tmovs\tr5, r3\n-\tstrb\tr2, [r6, #9]\n+\tstrb\tr2, [r7, #9]\n \tmovs\tr5, r3\n-\tstrb\tr4, [r7, #10]\n+\tstrb\tr4, [r0, #11]\n \tmovs\tr5, r3\n-\tstrb\tr2, [r7, #12]\n+\tstrb\tr2, [r0, #13]\n \tmovs\tr5, r3\n-\tstrb\tr0, [r3, #13]\n+\tstrb\tr0, [r4, #13]\n \tmovs\tr5, r3\n-\tbls.n\t22954c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8b718>\n+\tbge.n\t229564 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8b730>\n \tmovs\tr3, r3\n-\tbls.n\t22954c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8b718>\n+\tbge.n\t229564 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8b730>\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tstrb\tr2, [r4, #1]\n+\tstrb\tr2, [r5, #1]\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xf7f2001b\n-\t\t\t@ instruction: 0xf7ea001b\n-\t\t\t@ instruction: 0xf7e2001b\n-\tstrb\tr0, [r0, #8]\n+\t\t\t@ instruction: 0xf7fe001b\n+\t\t\t@ instruction: 0xf7f6001b\n+\t\t\t@ instruction: 0xf7ee001b\n+\tstrb\tr0, [r1, #8]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r2, #10]\n+\tstrb\tr6, [r3, #10]\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xf778001b\n-\t\t\t@ instruction: 0xf768001b\n+\t\t\t@ instruction: 0xf784001b\n+\t\t\t@ instruction: 0xf774001b\n Assembly::checkForReadNameLength(unsigned int, bool):\n ./src/mira/assembly_io.C:826\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr0, [pc, #1692]\t@ 229c28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8bdf4>\n \tvpush\t{d8}\n \tsub\tsp, #436\t@ 0x1b4\n@@ -1111680,45 +1111679,45 @@\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr1, #162\t@ 0xa2\n \tmovs\tr0, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrb\tr4, [r2, #1]\n+\tstrb\tr4, [r3, #1]\n \tmovs\tr5, r3\n-\tstrb\tr4, [r2, #0]\n+\tstrb\tr4, [r3, #0]\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [r6, #116]\t@ 0x74\n+\tldr\tr2, [r7, #116]\t@ 0x74\n \tmovs\tr5, r3\n-\tldr\tr0, [r1, #120]\t@ 0x78\n+\tldr\tr0, [r2, #120]\t@ 0x78\n \tmovs\tr5, r3\n-\tldr\tr6, [r1, #112]\t@ 0x70\n+\tldr\tr6, [r2, #112]\t@ 0x70\n \tmovs\tr5, r3\n-\tstrb\tr6, [r5, #2]\n+\tstrb\tr6, [r6, #2]\n \tmovs\tr5, r3\n-\tstrb\tr2, [r7, #5]\n+\tstrb\tr2, [r0, #6]\n \tmovs\tr5, r3\n-\tstrb\tr0, [r6, #5]\n+\tstrb\tr0, [r7, #5]\n \tmovs\tr5, r3\n-\tstrb\tr4, [r7, #5]\n+\tstrb\tr4, [r0, #6]\n \tmovs\tr5, r3\n-\tstrb\tr0, [r3, #1]\n+\tstrb\tr0, [r4, #1]\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tvshr.s16\td16, d11, #4\n-\tbne.n\t229c98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8be64>\n+\tvshr.s32\td16, d11, #24\n+\tbne.n\t229cb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8be7c>\n \tmovs\tr3, r3\n-\tvshr.s8\td16, d11, #4\n-\tvmov.i32\td16, #75\t@ 0x0000004b\n+\tvshr.s16\td16, d11, #8\n+\tvshr.s16\td16, d11, #16\n std::basic_ofstream >::basic_ofstream(std::__cxx11::basic_string, std::allocator > const&, std::_Ios_Openmode) [clone .isra.0]:\n /usr/include/c++/10/fstream:825\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, r0, #140\t@ 0x8c\n /usr/include/c++/10/fstream:825\n \tmov\tr4, r0\n@@ -1112324,40 +1112323,40 @@\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr1, #224\t@ 0xe0\n \tmovs\tr0, r5\n \tadds\tr1, #170\t@ 0xaa\n \tmovs\tr0, r5\n-\tasrs\tr4, r7, #13\n+\tasrs\tr0, r1, #14\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [r1, #92]\t@ 0x5c\n+\tldr\tr2, [r2, #92]\t@ 0x5c\n \tmovs\tr5, r3\n-\tsubs\tr2, #86\t@ 0x56\n+\tsubs\tr2, #98\t@ 0x62\n \tmovs\tr4, r3\n-\tldr\tr2, [r3, #84]\t@ 0x54\n+\tldr\tr2, [r4, #84]\t@ 0x54\n \tmovs\tr5, r3\n-\tlsls\tr0, r2, #10\n+\tlsls\tr4, r3, #10\n \tmovs\tr4, r3\n-\tstcl\t0, cr0, [ip, #-108]\t@ 0xffffff94\n-\tldr\tr2, [r0, #80]\t@ 0x50\n+\tldcl\t0, cr0, [r8, #-108]\t@ 0xffffff94\n+\tldr\tr2, [r1, #80]\t@ 0x50\n \tmovs\tr5, r3\n-\tldr\tr4, [r0, #80]\t@ 0x50\n+\tldr\tr4, [r1, #80]\t@ 0x50\n \tmovs\tr5, r3\n-\tldrsh\tr2, [r4, r6]\n+\tldrsh\tr2, [r5, r6]\n \tmovs\tr5, r3\n-\tldr\tr4, [r5, #68]\t@ 0x44\n+\tldr\tr4, [r6, #68]\t@ 0x44\n \tmovs\tr5, r3\n-\tldr\tr0, [r1, #76]\t@ 0x4c\n+\tldr\tr0, [r2, #76]\t@ 0x4c\n \tmovs\tr5, r3\n-\tldr\tr0, [r1, #64]\t@ 0x40\n+\tldr\tr0, [r2, #64]\t@ 0x40\n \tmovs\tr5, r3\n-\tldr\tr4, [r1, #64]\t@ 0x40\n+\tldr\tr4, [r2, #64]\t@ 0x40\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::postLoad():\n ./src/mira/assembly_io.C:1008\n@@ -1112686,29 +1112685,29 @@\n \tmovs\tr0, r5\n \tcmp\tr5, #212\t@ 0xd4\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [r7, #60]\t@ 0x3c\n+\tldr\tr6, [r0, #64]\t@ 0x40\n \tmovs\tr5, r3\n-\tasrs\tr0, r1, #21\n+\tasrs\tr0, r2, #21\n \tmovs\tr6, r3\n-\tstr\tr0, [r2, #36]\t@ 0x24\n+\tstr\tr0, [r3, #36]\t@ 0x24\n \tmovs\tr5, r3\n-\tldr\tr4, [pc, #792]\t@ (22a714 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8c8e0>)\n+\tldr\tr4, [pc, #840]\t@ (22a744 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8c910>)\n \tmovs\tr4, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr6, [r5, #16]\n+\tstr\tr6, [r6, #16]\n \tmovs\tr5, r3\n-\tasrs\tr4, r3, #16\n+\tasrs\tr4, r4, #16\n \tmovs\tr6, r3\n-\tldr\tr3, [pc, #648]\t@ (22a694 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8c860>)\n+\tldr\tr3, [pc, #696]\t@ (22a6c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8c890>)\n \tmovs\tr4, r3\n \tmov\tr1, sl\n \tmov\tr0, r7\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n \tcmp\tr8, r4\n \tbeq.n\t22a450 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8c61c>\n@@ -1113426,57 +1113425,57 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tldr\tr6, [r3, #24]\n+\tldr\tr6, [r4, #24]\n \tmovs\tr5, r3\n-\tldr\tr6, [r2, #28]\n+\tldr\tr6, [r3, #28]\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr6, [r2, #28]\n+\tldr\tr6, [r3, #28]\n \tmovs\tr5, r3\n-\tldr\tr0, [r7, #92]\t@ 0x5c\n+\tldr\tr0, [r0, #96]\t@ 0x60\n \tmovs\tr7, r3\n \tcmp\tr1, #112\t@ 0x70\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #0]\t@ (22a9cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8cb98>)\n+\tldr\tr1, [pc, #48]\t@ (22a9fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8cbc8>)\n \tmovs\tr4, r3\n-\tsvc\t80\t@ 0x50\n+\tsvc\t88\t@ 0x58\n \tmovs\tr4, r3\n-\tstr\tr0, [r0, #116]\t@ 0x74\n+\tstr\tr0, [r1, #116]\t@ 0x74\n \tmovs\tr5, r3\n-\tcbnz\tr4, 22a9d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8cba4>\n+\tcbnz\tr4, 22a9da , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8cba6>\n \tmovs\tr4, r3\n-\tldr\tr0, [pc, #384]\t@ (22ab5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8cd28>)\n+\tldr\tr0, [pc, #432]\t@ (22ab8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8cd58>)\n \tmovs\tr4, r3\n-\tstr\tr2, [r0, #112]\t@ 0x70\n+\tstr\tr2, [r1, #112]\t@ 0x70\n \tmovs\tr5, r3\n-\tstr\tr6, [r2, #120]\t@ 0x78\n+\tstr\tr6, [r3, #120]\t@ 0x78\n \tmovs\tr5, r3\n-\tstr\tr6, [r6, #72]\t@ 0x48\n+\tstr\tr6, [r7, #72]\t@ 0x48\n \tmovs\tr5, r3\n-\tstr\tr2, [r1, #88]\t@ 0x58\n+\tstr\tr2, [r2, #88]\t@ 0x58\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr2, [r5, #108]\t@ 0x6c\n+\tstr\tr2, [r6, #108]\t@ 0x6c\n \tmovs\tr5, r3\n-\tstr\tr2, [r4, #80]\t@ 0x50\n+\tstr\tr2, [r5, #80]\t@ 0x50\n \tmovs\tr5, r3\n-\tstr\tr4, [r7, #92]\t@ 0x5c\n+\tstr\tr4, [r0, #96]\t@ 0x60\n \tmovs\tr5, r3\n-\tstr\tr0, [r0, #76]\t@ 0x4c\n+\tstr\tr0, [r1, #76]\t@ 0x4c\n \tmovs\tr5, r3\n Assembly::saveDebrisList(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly_io.C:1666\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tmov\tr5, r0\n \tsub\tsp, #332\t@ 0x14c\n@@ -1113986,97 +1113985,97 @@\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr5, #6\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [r0, #104]\t@ 0x68\n+\tstr\tr4, [r1, #104]\t@ 0x68\n \tmovs\tr5, r3\n-\tldr\tr0, [r7, #16]\n+\tldr\tr0, [r0, #20]\n \tmovs\tr5, r3\n-\tblt.n\t22ae64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d030>\n+\tblt.n\t22ae74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d040>\n \tmovs\tr4, r3\n-\tldr\tr0, [r2, #16]\n+\tldr\tr0, [r3, #16]\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tmovs\tr3, #156\t@ 0x9c\n \tmovs\tr0, r5\n-\tstr\tr4, [r1, #84]\t@ 0x54\n-\tmovs\tr5, r3\n-\tstr\tr0, [r2, #84]\t@ 0x54\n-\tmovs\tr5, r3\n \tstr\tr4, [r2, #84]\t@ 0x54\n \tmovs\tr5, r3\n-\tstr\tr4, [r3, #84]\t@ 0x54\n+\tstr\tr0, [r3, #84]\t@ 0x54\n \tmovs\tr5, r3\n-\tstr\tr0, [r5, #84]\t@ 0x54\n+\tstr\tr4, [r3, #84]\t@ 0x54\n \tmovs\tr5, r3\n-\tstr\tr4, [r6, #84]\t@ 0x54\n+\tstr\tr4, [r4, #84]\t@ 0x54\n \tmovs\tr5, r3\n-\tstr\tr0, [r0, #88]\t@ 0x58\n+\tstr\tr0, [r6, #84]\t@ 0x54\n \tmovs\tr5, r3\n-\tstr\tr4, [r0, #88]\t@ 0x58\n+\tstr\tr4, [r7, #84]\t@ 0x54\n \tmovs\tr5, r3\n-\tstr\tr4, [r2, #88]\t@ 0x58\n+\tstr\tr0, [r1, #88]\t@ 0x58\n \tmovs\tr5, r3\n-\tstr\tr0, [r3, #88]\t@ 0x58\n+\tstr\tr4, [r1, #88]\t@ 0x58\n \tmovs\tr5, r3\n \tstr\tr4, [r3, #88]\t@ 0x58\n \tmovs\tr5, r3\n-\tstr\tr0, [r5, #88]\t@ 0x58\n+\tstr\tr0, [r4, #88]\t@ 0x58\n+\tmovs\tr5, r3\n+\tstr\tr4, [r4, #88]\t@ 0x58\n \tmovs\tr5, r3\n \tstr\tr0, [r6, #88]\t@ 0x58\n \tmovs\tr5, r3\n-\tstr\tr0, [r4, #72]\t@ 0x48\n+\tstr\tr0, [r7, #88]\t@ 0x58\n \tmovs\tr5, r3\n-\tstr\tr0, [r6, #88]\t@ 0x58\n+\tstr\tr0, [r5, #72]\t@ 0x48\n \tmovs\tr5, r3\n-\tstr\tr4, [r7, #88]\t@ 0x58\n+\tstr\tr0, [r7, #88]\t@ 0x58\n \tmovs\tr5, r3\n-\tstr\tr4, [r1, #92]\t@ 0x5c\n+\tstr\tr4, [r0, #92]\t@ 0x5c\n \tmovs\tr5, r3\n-\tstr\tr0, [r3, #92]\t@ 0x5c\n+\tstr\tr4, [r2, #92]\t@ 0x5c\n \tmovs\tr5, r3\n-\tstr\tr4, [r4, #92]\t@ 0x5c\n+\tstr\tr0, [r4, #92]\t@ 0x5c\n \tmovs\tr5, r3\n-\tstr\tr0, [r6, #92]\t@ 0x5c\n+\tstr\tr4, [r5, #92]\t@ 0x5c\n \tmovs\tr5, r3\n \tstr\tr0, [r7, #92]\t@ 0x5c\n \tmovs\tr5, r3\n \tstr\tr0, [r0, #96]\t@ 0x60\n \tmovs\tr5, r3\n-\tstr\tr0, [r2, #96]\t@ 0x60\n+\tstr\tr0, [r1, #96]\t@ 0x60\n \tmovs\tr5, r3\n-\tstr\tr4, [r3, #96]\t@ 0x60\n+\tstr\tr0, [r3, #96]\t@ 0x60\n \tmovs\tr5, r3\n-\tstr\tr0, [r4, #96]\t@ 0x60\n+\tstr\tr4, [r4, #96]\t@ 0x60\n \tmovs\tr5, r3\n \tstr\tr0, [r5, #96]\t@ 0x60\n \tmovs\tr5, r3\n \tstr\tr0, [r6, #96]\t@ 0x60\n \tmovs\tr5, r3\n-\tstr\tr4, [r6, #96]\t@ 0x60\n+\tstr\tr0, [r7, #96]\t@ 0x60\n \tmovs\tr5, r3\n-\tstr\tr4, [r6, #96]\t@ 0x60\n+\tstr\tr4, [r7, #96]\t@ 0x60\n \tmovs\tr5, r3\n \tstr\tr4, [r7, #96]\t@ 0x60\n \tmovs\tr5, r3\n-\tstr\tr0, [r1, #100]\t@ 0x64\n+\tstr\tr4, [r0, #100]\t@ 0x64\n \tmovs\tr5, r3\n-\tstr\tr4, [r1, #100]\t@ 0x64\n+\tstr\tr0, [r2, #100]\t@ 0x64\n+\tmovs\tr5, r3\n+\tstr\tr4, [r2, #100]\t@ 0x64\n \tmovs\tr5, r3\n Assembly::addRailsToBackbones():\n ./src/mira/assembly_io.C:525\n \tldr.w\tr2, [pc, #1304]\t@ 22b390 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d55c>\n \tldr.w\tr3, [pc, #1304]\t@ 22b394 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d560>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1114742,45 +1114741,45 @@\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr0, #180\t@ 0xb4\n \tmovs\tr0, r5\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrb\tr0, [r2, r2]\n+\tstrb\tr0, [r3, r2]\n \tmovs\tr5, r3\n-\tlsls\tr6, r7, #29\n+\tlsls\tr6, r0, #30\n \tmovs\tr6, r3\n-\tstr\tr6, [r1, #68]\t@ 0x44\n+\tstr\tr6, [r2, #68]\t@ 0x44\n \tmovs\tr5, r3\n-\tstr\tr4, [r6, #40]\t@ 0x28\n+\tstr\tr4, [r7, #40]\t@ 0x28\n \tmovs\tr5, r3\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr5, #172\t@ 0xac\n+\tsubs\tr5, #184\t@ 0xb8\n \tmovs\tr4, r3\n-\tsubs\tr5, #62\t@ 0x3e\n+\tsubs\tr5, #74\t@ 0x4a\n \tmovs\tr4, r3\n-\tstr\tr0, [r4, #32]\n+\tstr\tr0, [r5, #32]\n \tmovs\tr5, r3\n-\tstr\tr6, [r5, #32]\n+\tstr\tr6, [r6, #32]\n \tmovs\tr5, r3\n-\tstr\tr6, [r0, #32]\n+\tstr\tr6, [r1, #32]\n \tmovs\tr5, r3\n-\tstr\tr2, [r1, #36]\t@ 0x24\n+\tstr\tr2, [r2, #36]\t@ 0x24\n \tmovs\tr5, r3\n-\tstr\tr2, [r4, #32]\n+\tstr\tr2, [r5, #32]\n \tmovs\tr5, r3\n-\tstr\tr0, [r0, #36]\t@ 0x24\n+\tstr\tr0, [r1, #36]\t@ 0x24\n \tmovs\tr5, r3\n-\tstr\tr4, [r1, #32]\n+\tstr\tr4, [r2, #32]\n \tmovs\tr5, r3\n ./src/mira/../../src/mira/readpool.H:218 (discriminator 5)\n \tmov\tr1, r4\n \tmov\tr0, r7\n \tbl\t299f8 \n \tmov\tsl, r0\n \tmov\tr1, r4\n@@ -1115181,38 +1115180,38 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t22b784 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d950>\n+\tb.n\t22b79c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d968>\n \tmovs\tr3, r3\n-\tb.n\t22b780 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d94c>\n+\tb.n\t22b798 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8d964>\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xf66a001d\n+\t\t\t@ instruction: 0xf672001d\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsvc\t36\t@ 0x24\n+\tsvc\t48\t@ 0x30\n \tmovs\tr3, r3\n-\tsvc\t24\n+\tsvc\t36\t@ 0x24\n \tmovs\tr3, r3\n-\tlsls\tr0, r5, #27\n+\tlsls\tr0, r6, #27\n \tmovs\tr6, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tldrsh\tr6, [r2, r1]\n+\tldrsh\tr6, [r3, r1]\n \tmovs\tr5, r3\n-\tldrb\tr2, [r1, r5]\n+\tldrb\tr2, [r2, r5]\n \tmovs\tr5, r3\n-\tldrb\tr0, [r5, r5]\n+\tldrb\tr0, [r6, r5]\n \tmovs\tr5, r3\n ./src/mira/../../src/mira/readgrouplib.H:293\n \tmov\tr7, r0\n \tmov\tr0, r4\n \tldrd\tr5, r8, [sp, #44]\t@ 0x2c\n \tldr\tr6, [sp, #40]\t@ 0x28\n \tbl\t29b24 \n@@ -1116523,37 +1116522,37 @@\n \tb.n\t22bfa2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8e16e>\n \tasrs\tr2, r2, #24\n \tmovs\tr0, r5\n \tasrs\tr2, r1, #24\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrh\tr4, [r5, r7]\n+\tldrh\tr4, [r6, r7]\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsvc\t208\t@ 0xd0\n+\tsvc\t220\t@ 0xdc\n \tmovs\tr3, r3\n-\tsvc\t204\t@ 0xcc\n+\tsvc\t216\t@ 0xd8\n \tmovs\tr3, r3\n \tasrs\tr6, r0, #8\n \tmovs\tr0, r5\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tble.n\t22c098 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8e264>\n+\tble.n\t22c0b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8e27c>\n \tmovs\tr3, r3\n-\tble.n\t22c024 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8e1f0>\n+\tble.n\t22c03c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8e208>\n \tmovs\tr3, r3\n-\tldrsb\tr0, [r6, r2]\n+\tldrsb\tr0, [r7, r2]\n \tmovs\tr5, r3\n-\tble.n\t22c17c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8e348>\n+\tble.n\t22c194 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8e360>\n \tmovs\tr3, r3\n-\tldmia\tr3!, {r7}\n+\tldmia\tr3, {r2, r3, r7}\n \tmovs\tr3, r3\n-\tadd\tr4, sp, #704\t@ 0x2c0\n+\tadd\tr4, sp, #752\t@ 0x2f0\n \tmovs\tr3, r3\n \tldr\tr6, [sp, #400]\t@ 0x190\n \tmovs\tr3, r3\n Assembly::dumpSomeStatistics():\n ./src/mira/assembly_io.C:1124\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -1118183,81 +1118182,81 @@\n \tnop\n \tlsrs\tr2, r7, #25\n \tmovs\tr0, r5\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #25\n \tmovs\tr0, r5\n-\tstrb\tr4, [r0, r2]\n+\tstrb\tr4, [r1, r2]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r4, r2]\n+\tstrb\tr6, [r5, r2]\n \tmovs\tr5, r3\n-\tstrb\tr6, [r3, r1]\n+\tstrb\tr6, [r4, r1]\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr6, [r7, r7]\n+\tstrb\tr6, [r0, r0]\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrh\tr0, [r6, r4]\n+\tstrh\tr0, [r7, r4]\n \tmovs\tr5, r3\n-\tstr\tr0, [r7, r0]\n+\tstr\tr0, [r0, r1]\n \tmovs\tr5, r3\n-\tldr\tr7, [pc, #696]\t@ (22d0c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f294>)\n+\tldr\tr7, [pc, #728]\t@ (22d0e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f2b4>)\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr7, [pc, #184]\t@ (22ced4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f0a0>)\n+\tldr\tr7, [pc, #216]\t@ (22cef4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f0c0>)\n \tmovs\tr5, r3\n-\tldr\tr7, [pc, #136]\t@ (22cea8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f074>)\n+\tldr\tr7, [pc, #168]\t@ (22cec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f094>)\n \tmovs\tr5, r3\n-\tldr\tr7, [pc, #376]\t@ (22cf9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f168>)\n+\tldr\tr7, [pc, #408]\t@ (22cfbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f188>)\n \tmovs\tr5, r3\n-\tldr\tr7, [pc, #336]\t@ (22cf78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f144>)\n+\tldr\tr7, [pc, #368]\t@ (22cf98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f164>)\n \tmovs\tr5, r3\n-\tpop\t{r1, r3, r6, pc}\n+\tpop\t{r1, r4, r6, pc}\n \tmovs\tr4, r3\n \tldr\tr0, [r5, r7]\n \tmovs\tr1, r5\n-\tldr\tr7, [pc, #160]\t@ (22ced4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f0a0>)\n+\tldr\tr7, [pc, #192]\t@ (22cef4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f0c0>)\n \tmovs\tr5, r3\n-\tsubs\tr3, #10\n+\tsubs\tr3, #18\n \tmovs\tr7, r3\n \tldr\tr4, [r5, r6]\n \tmovs\tr1, r5\n-\tasrs\tr2, r1, #19\n+\tasrs\tr2, r2, #19\n \tmovs\tr5, r3\n-\tldr\tr6, [pc, #272]\t@ (22cf54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f120>)\n+\tldr\tr6, [pc, #304]\t@ (22cf74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f140>)\n \tmovs\tr5, r3\n-\tldr\tr6, [pc, #472]\t@ (22d020 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f1ec>)\n+\tldr\tr6, [pc, #504]\t@ (22d040 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f20c>)\n \tmovs\tr5, r3\n \tldr\tr4, [r4, r2]\n \tmovs\tr1, r5\n-\tasrs\tr2, r0, #15\n+\tasrs\tr2, r1, #15\n \tmovs\tr5, r3\n-\tldr\tr5, [pc, #464]\t@ (22d024 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f1f0>)\n+\tldr\tr5, [pc, #496]\t@ (22d044 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f210>)\n \tmovs\tr5, r3\n \tldrsb\tr6, [r2, r6]\n \tmovs\tr1, r5\n-\tasrs\tr6, r6, #10\n+\tasrs\tr6, r7, #10\n \tmovs\tr5, r3\n-\tldr\tr4, [pc, #480]\t@ (22d040 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f20c>)\n+\tldr\tr4, [pc, #512]\t@ (22d060 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f22c>)\n \tmovs\tr5, r3\n \tldrsb\tr2, [r1, r2]\n \tmovs\tr1, r5\n-\tasrs\tr2, r5, #6\n+\tasrs\tr2, r6, #6\n \tmovs\tr5, r3\n-\tldr\tr3, [pc, #480]\t@ (22d04c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f218>)\n+\tldr\tr3, [pc, #512]\t@ (22d06c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f238>)\n \tmovs\tr5, r3\n \tstrb\tr6, [r7, r5]\n \tmovs\tr1, r5\n-\tasrs\tr6, r3, #2\n+\tasrs\tr6, r4, #2\n \tmovs\tr5, r3\n /usr/include/c++/10/ostream:518\n \tadd\tr1, sp, #60\t@ 0x3c\n \tmovs\tr2, #1\n \tmov\tr0, r5\n \tmovs\tr6, #10\n \tstrb\tr6, [r1, #0]\n@@ -1119193,80 +1119192,80 @@\n \tb.n\t22d5a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f774>\n \tb.n\t22d52e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f6fa>\n \tb.n\t22d51e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f6ea>\n \tb.n\t22d528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f6f4>\n \tb.n\t22d51e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f6ea>\n \tb.n\t22d528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f6f4>\n \tnop\n-\tldr\tr2, [pc, #104]\t@ (22d63c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f808>)\n+\tldr\tr2, [pc, #136]\t@ (22d65c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f828>)\n \tmovs\tr5, r3\n \tstrb\tr0, [r2, r0]\n \tmovs\tr1, r5\n-\tlsrs\tr2, r6, #28\n+\tlsrs\tr2, r7, #28\n \tmovs\tr5, r3\n-\tldr\tr1, [pc, #512]\t@ (22d7e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f9ac>)\n+\tldr\tr1, [pc, #544]\t@ (22d800 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f9cc>)\n \tmovs\tr5, r3\n \tstrh\tr6, [r4, r5]\n \tmovs\tr1, r5\n-\tlsrs\tr4, r0, #26\n+\tlsrs\tr4, r1, #26\n \tmovs\tr5, r3\n-\tldr\tr0, [pc, #496]\t@ (22d7dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f9a8>)\n+\tldr\tr0, [pc, #528]\t@ (22d7fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f9c8>)\n \tmovs\tr5, r3\n-\tldr\tr0, [pc, #784]\t@ (22d900 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8facc>)\n+\tldr\tr0, [pc, #816]\t@ (22d920 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8faec>)\n \tmovs\tr5, r3\n-\tlsrs\tr4, r5, #21\n+\tlsrs\tr4, r6, #21\n \tmovs\tr5, r3\n-\tldr\tr0, [pc, #272]\t@ (22d708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f8d4>)\n+\tldr\tr0, [pc, #304]\t@ (22d728 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f8f4>)\n \tmovs\tr5, r3\n-\tldr\tr0, [pc, #160]\t@ (22d69c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f868>)\n+\tldr\tr0, [pc, #192]\t@ (22d6bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f888>)\n \tmovs\tr5, r3\n-\tldr\tr0, [pc, #32]\t@ (22d620 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f7ec>)\n+\tldr\tr0, [pc, #64]\t@ (22d640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f80c>)\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0x47fa\n+\tldr\tr0, [pc, #8]\t@ (22d60c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f7d8>)\n \tmovs\tr5, r3\n-\tbx\tr6\n+\tbx\tr7\n \tmovs\tr5, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldc2\t0, cr0, [sl, #156]\t@ 0x9c\n-\tlsrs\tr4, r1, #6\n+\tlsrs\tr0, r3, #6\n \tmovs\tr4, r3\n-\tadd\tsl, r4\n+\tadd\tsl, r5\n \tmovs\tr5, r3\n-\tadd\tlr, r1\n+\tadd\tlr, r2\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr0, r1, #4\n+\tlsrs\tr4, r2, #4\n \tmovs\tr4, r3\n-\tadd\tr0, fp\n+\tadd\tr0, ip\n \tmovs\tr5, r3\n-\tadd\tr4, sl\n+\tadd\tr4, fp\n \tmovs\tr5, r3\n-\tadd\tr6, r9\n+\tadd\tr6, sl\n \tmovs\tr5, r3\n-\tmvns\tr4, r2\n+\tmvns\tr4, r3\n \tmovs\tr5, r3\n \tldr\tr6, [pc, #520]\t@ (22d844 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8fa10>)\n \tmovs\tr1, r5\n \tlsrs\tr4, r2, #14\n \tmovs\tr0, r0\n \tlsrs\tr2, r6, #14\n \tmovs\tr0, r5\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcmn\tr2, r2\n+\tcmn\tr2, r3\n \tmovs\tr5, r3\n-\tcmp\tr0, r6\n+\tcmp\tr0, r7\n \tmovs\tr5, r3\n-\tcmp\tr2, r5\n+\tcmp\tr2, r6\n \tmovs\tr5, r3\n-\trors\tr2, r3\n+\trors\tr2, r4\n \tmovs\tr5, r3\n \tldr\tr5, [pc, #304]\t@ (22d78c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f958>)\n \tmovs\tr1, r5\n \tldr\tr5, [pc, #224]\t@ (22d740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8f90c>)\n \tmovs\tr1, r5\n Assembly::loadSequenceData_resume():\n ./src/mira/assembly_io.C:140\n@@ -1119411,15 +1119410,15 @@\n \t...\n \tldr??.w\tr0, [ip, #39]\t@ 0x27\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh.w\tr0, [r6, #39]\t@ 0x27\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr7, #222\t@ 0xde\n+\tadds\tr7, #230\t@ 0xe6\n \tmovs\tr5, r3\n \tstr.w\tr0, [ip, r7, lsl #2]\n Assembly::streamSequenceDataFromManifest(std::vector >&, Manifest&, ReadPool&, std::__cxx11::list >*, std::vector >*):\n ./src/mira/assembly_io.C:441\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n \tmov\tr4, r1\n@@ -1119835,35 +1119834,35 @@\n \tnop\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xf7c40027\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf7aa0027\n-\tbcc.n\t22da04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8fbd0>\n+\tbcc.n\t22da1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8fbe8>\n \tmovs\tr3, r3\n-\tlsls\tr0, r5, #7\n+\tlsls\tr4, r6, #7\n \tmovs\tr4, r3\n-\tpush\t{r1, r4, r5}\n+\tpush\t{r1, r2, r3, r4, r5}\n \tmovs\tr3, r3\n-\tbcs.n\t22db58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8fd24>\n+\tbcs.n\t22db70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8fd3c>\n \tmovs\tr3, r3\n-\tbcs.n\t22db28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8fcf4>\n+\tbcs.n\t22db40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x8fd0c>\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadcs\tr4, r6\n+\tadcs\tr4, r7\n \tmovs\tr5, r3\n-\tadcs\tr2, r2\n+\tadcs\tr2, r3\n \tmovs\tr5, r3\n-\tstr\tr7, [sp, #160]\t@ 0xa0\n+\tstr\tr7, [sp, #192]\t@ 0xc0\n \tmovs\tr5, r3\n-\tlsrs\tr6, r7\n+\tasrs\tr6, r0\n \tmovs\tr5, r3\n-\tlsrs\tr2, r6\n+\tlsrs\tr2, r7\n \tmovs\tr5, r3\n ./src/mira/assembly_io.C:475\n \tvmov\tr2, s18\n \tldr\tr1, [sp, #20]\n \tmov\tr0, r7\n \tbl\t386c18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e8de4>\n /usr/include/c++/10/ostream:611\n@@ -1120442,50 +1120441,50 @@\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t22df0a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x900d6>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr7, #150\t@ 0x96\n+\tsubs\tr7, #158\t@ 0x9e\n \tmovs\tr5, r3\n-\tsubs\tr7, #164\t@ 0xa4\n+\tsubs\tr7, #172\t@ 0xac\n \tmovs\tr5, r3\n-\tlsls\tr2, r2, #12\n+\tlsls\tr6, r3, #12\n \tmovs\tr4, r3\n-\tsubs\tr7, #150\t@ 0x96\n+\tsubs\tr7, #158\t@ 0x9e\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tsubs\tr5, #164\t@ 0xa4\n+\tsubs\tr5, #172\t@ 0xac\n \tmovs\tr5, r3\n-\tsubs\tr5, #192\t@ 0xc0\n+\tsubs\tr5, #200\t@ 0xc8\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsubs\tr6, #122\t@ 0x7a\n+\tsubs\tr6, #130\t@ 0x82\n \tmovs\tr5, r3\n-\tsubs\tr6, #52\t@ 0x34\n+\tsubs\tr6, #60\t@ 0x3c\n \tmovs\tr5, r3\n-\t\t\t@ instruction: 0xb724\n+\t\t\t@ instruction: 0xb730\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xb720\n+\t\t\t@ instruction: 0xb72c\n \tmovs\tr3, r3\n-\tldmia\tr5, {r5, r6}\n+\tldmia\tr5, {r3, r5, r6}\n \tmovs\tr5, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf0f40027\n-\tadd\tr4, sp, #448\t@ 0x1c0\n+\tadd\tr4, sp, #496\t@ 0x1f0\n \tmovs\tr3, r3\n \tldrb\tr4, [r3, #29]\n \tmovs\tr3, r3\n Assembly::sortReadPool(std::vector >&):\n ./src/mira/assembly_io.C:381\n \tldr.w\tr2, [pc, #1264]\t@ 22e470 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9063c>\n \tldr.w\tr3, [pc, #1264]\t@ 22e474 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x90640>\n@@ -1121144,26 +1121143,26 @@\n \tb.n\t22e1b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x90384>\n \tnop\n \tnop.w\n \t...\n \tvaddl.s16\tq8, d12, d23\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tsubs\tr3, #158\t@ 0x9e\n+\tsubs\tr3, #166\t@ 0xa6\n \tmovs\tr5, r3\n \tvaddl.s32\tq0, d14, d23\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr3, #154\t@ 0x9a\n+\tsubs\tr3, #162\t@ 0xa2\n \tmovs\tr5, r3\n \tlsrs\tr4, r3, #26\n \tmovs\tr0, r0\n-\tcbnz\tr4, 22e4fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x906c8>\n+\tcbnz\tr0, 22e500 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x906cc>\n \tmovs\tr3, r3\n-\tsubs\tr0, #102\t@ 0x66\n+\tsubs\tr0, #110\t@ 0x6e\n \tmovs\tr5, r3\n \tsubs.w\tr0, lr, r7, asr #32\n \t\t\t@ instruction: 0xeb960027\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tblt.w\t22e60e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x907da>\n /usr/include/c++/10/ext/new_allocator.h:115\n \tmov\tr0, r9\n@@ -1121399,27 +1121398,27 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n /usr/include/c++/10/bits/stl_vector.h:353\n \tcmp\tr5, #0\n \tbne.n\t22e654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x90820>\n \tb.n\t22e688 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x90854>\n \tnop\n-\tadds\tr5, #222\t@ 0xde\n+\tadds\tr5, #230\t@ 0xe6\n \tmovs\tr5, r3\n-\tadds\tr5, #220\t@ 0xdc\n+\tadds\tr5, #228\t@ 0xe4\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #256\t@ 0x100\n+\tadd\tr7, sp, #304\t@ 0x130\n \tmovs\tr3, r3\n-\tstrh\tr4, [r4, #48]\t@ 0x30\n+\tstrh\tr0, [r6, #48]\t@ 0x30\n \tmovs\tr3, r3\n-\tmrc2\t0, 0, r0, cr8, cr11, {0}\n+\tmcr2\t0, 1, r0, cr4, cr11, {0}\n Assembly::saveRGSTInfo(int, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_io.C:1612\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n \tldr.w\tr0, [pc, #1608]\t@ 22ed00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x90ecc>\n \tvpush\t{d8-d10}\n \tsub.w\tsp, sp, #708\t@ 0x2c4\n@@ -1122246,66 +1122245,66 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia.w\tr2, {r0, r1, r2, r5}\n-\thlt\t0x0020\n+\thlt\t0x0028\n \tmovs\tr6, r3\n \tstrex\tr0, r0, [ip, #156]\t@ 0x9c\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr4, #224\t@ 0xe0\n+\tadds\tr4, #232\t@ 0xe8\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadds\tr4, #180\t@ 0xb4\n+\tadds\tr4, #188\t@ 0xbc\n \tmovs\tr5, r3\n-\tldr\tr4, [r7, #56]\t@ 0x38\n+\tldr\tr4, [r0, #60]\t@ 0x3c\n \tmovs\tr6, r3\n-\tadds\tr4, #130\t@ 0x82\n+\tadds\tr4, #138\t@ 0x8a\n \tmovs\tr5, r3\n-\tadds\tr0, #102\t@ 0x66\n+\tadds\tr0, #110\t@ 0x6e\n \tmovs\tr5, r3\n-\tadds\tr4, #110\t@ 0x6e\n+\tadds\tr4, #118\t@ 0x76\n \tmovs\tr5, r3\n-\tadds\tr4, #54\t@ 0x36\n+\tadds\tr4, #62\t@ 0x3e\n \tmovs\tr5, r3\n-\tadds\tr4, #18\n+\tadds\tr4, #26\n \tmovs\tr5, r3\n-\tldr\tr0, [r1, #44]\t@ 0x2c\n+\tldr\tr0, [r2, #44]\t@ 0x2c\n \tmovs\tr6, r3\n-\tadds\tr3, #230\t@ 0xe6\n+\tadds\tr3, #238\t@ 0xee\n \tmovs\tr5, r3\n-\tstrb\tr6, [r3, #28]\n+\tstrb\tr6, [r4, #28]\n \tmovs\tr4, r3\n-\tadds\tr3, #226\t@ 0xe2\n+\tadds\tr3, #234\t@ 0xea\n \tmovs\tr5, r3\n-\tadds\tr3, #200\t@ 0xc8\n+\tadds\tr3, #208\t@ 0xd0\n \tmovs\tr5, r3\n-\tadds\tr3, #162\t@ 0xa2\n+\tadds\tr3, #170\t@ 0xaa\n \tmovs\tr5, r3\n-\tadds\tr3, #142\t@ 0x8e\n+\tadds\tr3, #150\t@ 0x96\n \tmovs\tr5, r3\n-\tadds\tr3, #124\t@ 0x7c\n+\tadds\tr3, #132\t@ 0x84\n \tmovs\tr5, r3\n-\tadds\tr3, #106\t@ 0x6a\n+\tadds\tr3, #114\t@ 0x72\n \tmovs\tr5, r3\n-\tadds\tr3, #86\t@ 0x56\n+\tadds\tr3, #94\t@ 0x5e\n \tmovs\tr5, r3\n-\tldrb\tr0, [r0, #15]\n+\tldrb\tr4, [r1, #15]\n \tmovs\tr3, r3\n-\tstrb\tr0, [r2, #21]\n+\tstrb\tr0, [r3, #21]\n \tmovs\tr4, r3\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr0, #12\n+\tadds\tr0, #20\n \tmovs\tr5, r3\n /usr/include/boost/format/parsing.hpp:530\n \tadd\tr0, sp, #336\t@ 0x150\n \tcbz\tr6, 22ed88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x90f54>\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr\tr1, [r4, #0]\n /usr/include/boost/format/parsing.hpp:530\n@@ -1123862,15 +1123861,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/stl_construct.h:151\n \tadds\tr5, #92\t@ 0x5c\n \tb.n\t22f7d2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9199e>\n \tnop\n-\tcmp\tr1, #166\t@ 0xa6\n+\tcmp\tr1, #174\t@ 0xae\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n@@ -1123880,29 +1123879,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tbhi.n\t22f840 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x91a0c>\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsls\tr4, r3, #1\n+\tlsls\tr0, r5, #1\n \tmovs\tr4, r3\n-\tlsls\tr6, r3, #5\n+\tlsls\tr2, r5, #5\n \tmovs\tr4, r3\n-\tlsls\tr4, r0, #6\n+\tlsls\tr0, r2, #6\n \tmovs\tr4, r3\n-\tvqadd.u32\td16, d6, d11\n-\tsubs\tr0, r2, r5\n+\tvqadd.u64\td16, d2, d11\n+\tsubs\tr4, r3, r5\n \tmovs\tr4, r3\n-\tvshr.u32\td16, d11, #2\n-\tlsls\tr4, r4, #6\n+\tmovs\tr2, r1\n \tmovs\tr4, r3\n-\tlsls\tr6, r6, #8\n+\tlsls\tr0, r6, #6\n \tmovs\tr4, r3\n-\tlsls\tr4, r3, #9\n+\tlsls\tr2, r0, #9\n+\tmovs\tr4, r3\n+\tlsls\tr0, r5, #9\n \tmovs\tr4, r3\n \tlsls\tr0, r4, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #11\n \tmovs\tr0, r0\n Assembly::postLoadBackbone():\n ./src/mira/assembly_io.C:890\n@@ -1124548,59 +1124548,59 @@\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbvs.n\t22fe44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92010>\n \tmovs\tr7, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr3, #198\t@ 0xc6\n+\tmovs\tr3, #206\t@ 0xce\n \tmovs\tr5, r3\n \tcmp\tr1, #46\t@ 0x2e\n \tmovs\tr1, r5\n-\tmovs\tr3, #180\t@ 0xb4\n+\tmovs\tr3, #188\t@ 0xbc\n \tmovs\tr5, r3\n-\tmovs\tr3, #198\t@ 0xc6\n+\tmovs\tr3, #206\t@ 0xce\n \tmovs\tr5, r3\n \tcmp\tr0, #218\t@ 0xda\n \tmovs\tr1, r5\n-\tmovs\tr4, #116\t@ 0x74\n+\tmovs\tr4, #124\t@ 0x7c\n \tmovs\tr5, r3\n-\tb.n\t23054c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92718>\n+\tb.n\t23055c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92728>\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr2, #154\t@ 0x9a\n+\tmovs\tr2, #162\t@ 0xa2\n \tmovs\tr5, r3\n-\tmovs\tr2, #176\t@ 0xb0\n+\tmovs\tr2, #184\t@ 0xb8\n \tmovs\tr5, r3\n \tbcc.n\t22fdbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x91f88>\n \tmovs\tr7, r4\n-\tasrs\tr0, r4, #13\n+\tasrs\tr0, r5, #13\n \tmovs\tr5, r3\n-\tmovs\tr1, #72\t@ 0x48\n+\tmovs\tr1, #80\t@ 0x50\n \tmovs\tr5, r3\n-\tbpl.n\t22fed8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x920a4>\n+\tbpl.n\t22fee8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x920b4>\n \tmovs\tr4, r3\n-\tmovs\tr1, #18\n+\tmovs\tr1, #26\n \tmovs\tr5, r3\n-\tmovs\tr0, #194\t@ 0xc2\n+\tmovs\tr0, #202\t@ 0xca\n \tmovs\tr5, r3\n \tmovs\tr5, #238\t@ 0xee\n \tmovs\tr1, r5\n \tlsls\tr4, r4, #22\n \tmovs\tr0, r0\n \tb.n\t23047c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92648>\n \tmovs\tr7, r4\n-\tldrh\tr2, [r5, #48]\t@ 0x30\n+\tldrh\tr6, [r6, #48]\t@ 0x30\n \tmovs\tr3, r3\n \tstr\tr2, [r3, #16]\n \tmovs\tr3, r3\n-\tmovs\tr1, #80\t@ 0x50\n+\tmovs\tr1, #88\t@ 0x58\n \tmovs\tr5, r3\n-\tmovs\tr1, #146\t@ 0x92\n+\tmovs\tr1, #154\t@ 0x9a\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tmovs\tr5, #82\t@ 0x52\n \tmovs\tr1, r5\n@@ -1126309,119 +1126309,119 @@\n \tnop\n \tbne.n\t230b20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92cec>\n \tmovs\tr7, r4\n \tbne.n\t230b18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92ce4>\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tudf\t#4\n+\tudf\t#12\n \tmovs\tr4, r3\n-\tble.n\t230ae8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92cb4>\n+\tble.n\t230af8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92cc4>\n \tmovs\tr4, r3\n-\tadd\tr1, pc, #760\t@ (adr r1, 230e00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92fcc>)\n+\tadd\tr1, pc, #792\t@ (adr r1, 230e20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92fec>)\n \tmovs\tr6, r3\n-\tble.n\t230a9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92c68>\n+\tble.n\t230aac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92c78>\n \tmovs\tr4, r3\n-\tmovs\tr0, #56\t@ 0x38\n+\tmovs\tr0, #64\t@ 0x40\n \tmovs\tr5, r3\n-\tmovs\tr0, #68\t@ 0x44\n+\tmovs\tr0, #76\t@ 0x4c\n \tmovs\tr5, r3\n-\tmovs\tr0, #32\n+\tmovs\tr0, #40\t@ 0x28\n \tmovs\tr5, r3\n-\tsubs\tr4, r7, r0\n+\tsubs\tr4, r0, r1\n \tmovs\tr5, r3\n-\tmovs\tr0, #54\t@ 0x36\n+\tmovs\tr0, #62\t@ 0x3e\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsubs\tr4, r0, #5\n+\tsubs\tr4, r1, #5\n \tmovs\tr5, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadds\tr6, r6, #7\n+\tadds\tr6, r7, #7\n \tmovs\tr5, r3\n-\tsubs\tr0, r1, #0\n+\tsubs\tr0, r2, #0\n \tmovs\tr5, r3\n-\tstr\tr5, [sp, #440]\t@ 0x1b8\n+\tstr\tr5, [sp, #472]\t@ 0x1d8\n \tmovs\tr4, r3\n-\tstrh\tr2, [r4, #20]\n+\tstrh\tr2, [r5, #20]\n \tmovs\tr4, r3\n-\tstr\tr5, [sp, #320]\t@ 0x140\n+\tstr\tr5, [sp, #352]\t@ 0x160\n \tmovs\tr4, r3\n-\tstr\tr5, [sp, #248]\t@ 0xf8\n+\tstr\tr5, [sp, #280]\t@ 0x118\n \tmovs\tr4, r3\n-\tstr\tr5, [sp, #184]\t@ 0xb8\n+\tstr\tr5, [sp, #216]\t@ 0xd8\n \tmovs\tr4, r3\n-\tstr\tr5, [sp, #120]\t@ 0x78\n+\tstr\tr5, [sp, #152]\t@ 0x98\n \tmovs\tr4, r3\n-\tstr\tr5, [sp, #56]\t@ 0x38\n+\tstr\tr5, [sp, #88]\t@ 0x58\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #1016]\t@ 0x3f8\n+\tstr\tr5, [sp, #24]\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #960]\t@ 0x3c0\n+\tstr\tr4, [sp, #992]\t@ 0x3e0\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #904]\t@ 0x388\n+\tstr\tr4, [sp, #936]\t@ 0x3a8\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #840]\t@ 0x348\n+\tstr\tr4, [sp, #872]\t@ 0x368\n \tmovs\tr4, r3\n-\tldr\tr7, [pc, #16]\t@ (230b78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92d44>)\n+\tldr\tr7, [pc, #48]\t@ (230b98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x92d64>)\n \tmovs\tr6, r3\n-\tstr\tr4, [sp, #616]\t@ 0x268\n+\tstr\tr4, [sp, #648]\t@ 0x288\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #584]\t@ 0x248\n+\tstr\tr4, [sp, #616]\t@ 0x268\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #504]\t@ 0x1f8\n+\tstr\tr4, [sp, #536]\t@ 0x218\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #440]\t@ 0x1b8\n+\tstr\tr4, [sp, #472]\t@ 0x1d8\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #376]\t@ 0x178\n+\tstr\tr4, [sp, #408]\t@ 0x198\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #312]\t@ 0x138\n+\tstr\tr4, [sp, #344]\t@ 0x158\n \tmovs\tr4, r3\n-\tsubs\tr2, r6, r1\n+\tsubs\tr2, r7, r1\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr0, r7, r0\n+\tsubs\tr0, r0, r1\n \tmovs\tr5, r3\n-\tsubs\tr0, r5, r0\n+\tsubs\tr0, r6, r0\n \tmovs\tr5, r3\n-\tsubs\tr2, r5, r1\n+\tsubs\tr2, r6, r1\n \tmovs\tr5, r3\n-\tsubs\tr6, r5, r2\n+\tsubs\tr6, r6, r2\n \tmovs\tr5, r3\n-\tsubs\tr4, r7, r2\n+\tsubs\tr4, r0, r3\n \tmovs\tr5, r3\n-\tadds\tr0, #0\n+\tadds\tr0, #8\n \tmovs\tr7, r3\n-\tsubs\tr7, #214\t@ 0xd6\n+\tsubs\tr7, #222\t@ 0xde\n \tmovs\tr4, r3\n \tstmia\tr6!, {r1, r2, r3, r4, r5, r6}\n \tmovs\tr7, r4\n-\tasrs\tr0, r5, #22\n-\tmovs\tr5, r3\n-\tasrs\tr4, r7, #24\n+\tasrs\tr0, r6, #22\n \tmovs\tr5, r3\n-\tasrs\tr6, r7, #28\n+\tasrs\tr4, r0, #25\n \tmovs\tr5, r3\n \tasrs\tr6, r0, #29\n \tmovs\tr5, r3\n-\tasrs\tr4, r0, #29\n+\tasrs\tr6, r1, #29\n \tmovs\tr5, r3\n-\tasrs\tr4, r5, #22\n+\tasrs\tr4, r1, #29\n \tmovs\tr5, r3\n-\tasrs\tr2, r4, #22\n+\tasrs\tr4, r6, #22\n \tmovs\tr5, r3\n-\tasrs\tr6, r0, #21\n+\tasrs\tr2, r5, #22\n \tmovs\tr5, r3\n-\tstrh\tr6, [r0, #4]\n+\tasrs\tr6, r1, #21\n+\tmovs\tr5, r3\n+\tstrh\tr2, [r2, #4]\n \tmovs\tr3, r3\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r6, #0]\n /usr/include/c++/10/bits/stl_vector.h:336\n \tldr\tr2, [r6, #8]\n \tsubs\tr1, r2, r0\n /usr/include/c++/10/bits/stl_vector.h:353\n@@ -1126837,27 +1126837,27 @@\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr2!, {r2, r3, r6}\n \tmovs\tr7, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr0, [r1, #3]\n+\tldrb\tr0, [r2, #3]\n \tmovs\tr4, r3\n \tstmia\tr2!, {r1, r3}\n \tmovs\tr7, r4\n-\tasrs\tr0, r1, #20\n+\tasrs\tr0, r2, #20\n \tmovs\tr5, r3\n-\tldrh\tr2, [r6, #60]\t@ 0x3c\n+\tldrh\tr6, [r7, #60]\t@ 0x3c\n \tmovs\tr3, r3\n-\tasrs\tr2, r0, #19\n+\tasrs\tr2, r1, #19\n \tmovs\tr5, r3\n-\tasrs\tr4, r3, #16\n+\tasrs\tr4, r4, #16\n \tmovs\tr5, r3\n-\tasrs\tr6, r6, #16\n+\tasrs\tr6, r7, #16\n \tmovs\tr5, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n void boost::io::detail::call_put_head, double>(std::basic_ostream >&, void const*):\n /usr/include/boost/format/feed_args.hpp:122\n@@ -1127515,17 +1127515,17 @@\n \tmovw\tr2, #1511\t@ 0x5e7\n \tldr\tr1, [pc, #16]\t@ (23128c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93458>)\n \tldr\tr0, [pc, #16]\t@ (231290 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9345c>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tstmdb\tlr!, {r2, r3, r4}\n-\teors.w\tr0, ip, ip, lsr #32\n-\t\t\t@ instruction: 0xead6001c\n+\tldmdb\tr6!, {r2, r3, r4}\n+\t\t\t@ instruction: 0xeaa4001c\n+\t\t\t@ instruction: 0xeade001c\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::unwind_greedy_single_repeat(bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1384\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr3, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1386\n \tldr\tr6, [r0, #112]\t@ 0x70\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1389\n@@ -1127760,23 +1127760,23 @@\n \tmovw\tr2, #1397\t@ 0x575\n \tldr\tr1, [pc, #40]\t@ (231448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93614>)\n \tldr\tr0, [pc, #40]\t@ (23144c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93618>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tldrd\tr0, r0, [r2, #-112]!\t@ 0x70\n-\tstmdb\tr0!, {r2, r3, r4}\n-\tadd.w\tr0, r6, ip, lsr #32\n-\tldrd\tr0, r0, [lr, #-112]\t@ 0x70\n-\tstmdb\tip, {r2, r3, r4}\n-\t\t\t@ instruction: 0xeae2001c\n-\tstrd\tr0, r0, [sl, #-112]\t@ 0x70\n-\tldrd\tr0, r0, [r8], #112\t@ 0x70\n-\t\t\t@ instruction: 0xeaba001c\n+\tldrd\tr0, r0, [sl, #-112]!\t@ 0x70\n+\tstmdb\tr8!, {r2, r3, r4}\n+\tadd.w\tr0, lr, ip, lsr #32\n+\tstrd\tr0, r0, [r6, #-112]!\t@ 0x70\n+\tldmdb\tr4, {r2, r3, r4}\n+\t\t\t@ instruction: 0xeaea001c\n+\tldrd\tr0, r0, [r2, #-112]\t@ 0x70\n+\tstmdb\tr0, {r2, r3, r4}\n+\t\t\t@ instruction: 0xeac2001c\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_backstep():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:726\n \tpush\t{r4}\n \tmov\tr3, r0\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:735\n \tldr\tr4, [r0, #44]\t@ 0x2c\n \tldr\tr1, [r0, #20]\n@@ -1128359,19 +1128359,19 @@\n \tmov.w\tr2, #728\t@ 0x2d8\n \tldr\tr1, [pc, #16]\t@ (231854 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93a20>)\n \tldr\tr0, [pc, #16]\t@ (231858 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93a24>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tlsrs\tr6, r0, #10\n+\tlsrs\tr6, r1, #10\n \tmovs\tr5, r3\n-\tlsrs\tr4, r5, #14\n+\tlsrs\tr4, r6, #14\n \tmovs\tr5, r3\n-\tlsrs\tr6, r2, #15\n+\tlsrs\tr6, r3, #15\n \tmovs\tr5, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::unwind_paren(bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1297\n \tldr\tr3, [r0, #112]\t@ 0x70\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1299\n \tcbz\tr1, 231868 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93a34>\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1312\n@@ -1128454,19 +1128454,19 @@\n \tldr\tr1, [pc, #16]\t@ (2318e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93ab0>)\n \tldr\tr0, [pc, #20]\t@ (2318e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93ab4>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tlsrs\tr4, r2, #13\n+\tlsrs\tr4, r3, #13\n \tmovs\tr5, r3\n-\tlsrs\tr2, r1, #20\n+\tlsrs\tr2, r2, #20\n \tmovs\tr5, r3\n-\tlsrs\tr0, r7, #20\n+\tlsrs\tr0, r0, #21\n \tmovs\tr5, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_soft_buffer_end():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:702\n \tpush\t{r3, r4, r5, r6, r7, lr}\n /usr/include/boost/regex/v4/match_flags.hpp:100\n \tldr\tr3, [r0, #48]\t@ 0x30\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:704\n@@ -1128607,19 +1128607,19 @@\n \tldr\tr1, [pc, #16]\t@ (2319f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93bc0>)\n \tldr\tr0, [pc, #20]\t@ (2319f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93bc4>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tlsrs\tr0, r5, #3\n+\tlsrs\tr0, r6, #3\n \tmovs\tr5, r3\n-\tlsrs\tr6, r1, #8\n+\tlsrs\tr6, r2, #8\n \tmovs\tr5, r3\n-\tlsrs\tr0, r7, #8\n+\tlsrs\tr0, r0, #9\n \tmovs\tr5, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::unwind_slow_dot_repeat(bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1433\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr3, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1435\n \tldr\tr7, [r0, #112]\t@ 0x70\n@@ -1128833,43 +1128833,43 @@\n \tmovw\tr2, #1447\t@ 0x5a7\n \tldr\tr1, [pc, #64]\t@ (231b8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93d58>)\n \tldr\tr0, [pc, #64]\t@ (231b90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93d5c>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tlsrs\tr2, r5, #12\n+\tlsrs\tr2, r6, #12\n \tmovs\tr5, r3\n-\tb.n\t231f98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94164>\n+\tb.n\t231fa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94174>\n \tmovs\tr4, r3\n-\tlsrs\tr6, r2, #18\n+\tlsrs\tr6, r3, #18\n \tmovs\tr5, r3\n-\tlsrs\tr6, r2, #12\n+\tlsrs\tr6, r3, #12\n \tmovs\tr5, r3\n-\tb.n\t231f7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94148>\n+\tb.n\t231f8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94158>\n \tmovs\tr4, r3\n-\tb.n\t231ff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x941c0>\n+\tb.n\t232004 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x941d0>\n \tmovs\tr4, r3\n-\tlsrs\tr2, r0, #12\n+\tlsrs\tr2, r1, #12\n \tmovs\tr5, r3\n-\tb.n\t231f60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9412c>\n+\tb.n\t231f70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9413c>\n \tmovs\tr4, r3\n-\tlsrs\tr2, r2, #18\n+\tlsrs\tr2, r3, #18\n \tmovs\tr5, r3\n-\tlsrs\tr6, r5, #11\n+\tlsrs\tr6, r6, #11\n \tmovs\tr5, r3\n-\tb.n\t231f44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94110>\n+\tb.n\t231f54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94120>\n \tmovs\tr4, r3\n-\tb.n\t2322f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x944c0>\n+\tb.n\t232304 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x944d0>\n \tmovs\tr4, r3\n-\tlsrs\tr2, r3, #11\n+\tlsrs\tr2, r4, #11\n \tmovs\tr5, r3\n-\tb.n\t231f28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x940f4>\n+\tb.n\t231f38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94104>\n \tmovs\tr4, r3\n-\tb.n\t2322b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9447c>\n+\tb.n\t2322c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9448c>\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::unwind_char_repeat(bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1554\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1556\n \tldr.w\tfp, [r0, #112]\t@ 0x70\n@@ -1129357,43 +1129357,43 @@\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1378\n \tldr\tr5, [r4, #112]\t@ 0x70\n \tb.n\t231dc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x93f94>\n-\tlsls\tr6, r5, #17\n+\tlsls\tr6, r6, #17\n \tmovs\tr5, r3\n-\tlsls\tr4, r2, #22\n+\tlsls\tr4, r3, #22\n \tmovs\tr5, r3\n-\tlsls\tr6, r7, #22\n+\tlsls\tr6, r0, #23\n \tmovs\tr5, r3\n-\tlsrs\tr6, r6, #5\n+\tlsrs\tr6, r7, #5\n \tmovs\tr5, r3\n-\tudf\t#168\t@ 0xa8\n+\tudf\t#176\t@ 0xb0\n \tmovs\tr4, r3\n-\tudf\t#226\t@ 0xe2\n+\tudf\t#234\t@ 0xea\n \tmovs\tr4, r3\n-\tlsrs\tr2, r4, #5\n+\tlsrs\tr2, r5, #5\n \tmovs\tr5, r3\n-\tudf\t#148\t@ 0x94\n+\tudf\t#156\t@ 0x9c\n \tmovs\tr4, r3\n-\tlsrs\tr2, r6, #11\n+\tlsrs\tr2, r7, #11\n \tmovs\tr5, r3\n-\tlsrs\tr6, r1, #5\n+\tlsrs\tr6, r2, #5\n \tmovs\tr5, r3\n-\tudf\t#128\t@ 0x80\n+\tudf\t#136\t@ 0x88\n \tmovs\tr4, r3\n-\tb.n\t231f98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94164>\n+\tb.n\t231fa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94174>\n \tmovs\tr4, r3\n-\tlsrs\tr2, r7, #4\n+\tlsrs\tr2, r0, #5\n \tmovs\tr5, r3\n-\tudf\t#108\t@ 0x6c\n+\tudf\t#116\t@ 0x74\n \tmovs\tr4, r3\n-\tlsrs\tr2, r4, #10\n+\tlsrs\tr2, r5, #10\n \tmovs\tr5, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::unwind_short_set_repeat(bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1623\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1625\n \tldr.w\tr9, [r0, #112]\t@ 0x70\n@@ -1129750,49 +1129750,49 @@\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1664\n \tldrb.w\tr1, [r6, #284]\t@ 0x11c\n \tcmp\tr1, #0\n \tbne.w\t232028 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x941f4>\n \tb.n\t232064 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94230>\n-\tlsls\tr6, r3, #7\n+\tlsls\tr6, r4, #7\n \tmovs\tr5, r3\n-\tlsls\tr4, r0, #12\n+\tlsls\tr4, r1, #12\n \tmovs\tr5, r3\n-\tlsls\tr6, r5, #12\n+\tlsls\tr6, r6, #12\n \tmovs\tr5, r3\n-\tlsrs\tr6, r4, #2\n+\tlsrs\tr6, r5, #2\n \tmovs\tr5, r3\n-\tbgt.n\t2321ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94378>\n+\tbgt.n\t2321bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94388>\n \tmovs\tr4, r3\n-\tbgt.n\t232224 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x943f0>\n+\tbgt.n\t232234 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94400>\n \tmovs\tr4, r3\n-\tlsrs\tr2, r2, #2\n+\tlsrs\tr2, r3, #2\n \tmovs\tr5, r3\n-\tbgt.n\t232190 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9435c>\n+\tbgt.n\t2321a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9436c>\n \tmovs\tr4, r3\n-\tble.n\t232118 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x942e4>\n+\tble.n\t232128 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x942f4>\n \tmovs\tr4, r3\n-\tlsrs\tr6, r7, #1\n+\tlsrs\tr6, r0, #2\n \tmovs\tr5, r3\n-\tblt.n\t232174 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94340>\n+\tblt.n\t232184 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94350>\n \tmovs\tr4, r3\n-\tlsrs\tr2, r5, #7\n+\tlsrs\tr2, r6, #7\n \tmovs\tr5, r3\n-\tlsrs\tr2, r5, #1\n+\tlsrs\tr2, r6, #1\n \tmovs\tr5, r3\n-\tblt.n\t232158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94324>\n+\tblt.n\t232168 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94334>\n \tmovs\tr4, r3\n-\tlsrs\tr2, r0, #8\n+\tlsrs\tr2, r1, #8\n \tmovs\tr5, r3\n-\tlsrs\tr6, r2, #1\n+\tlsrs\tr6, r3, #1\n \tmovs\tr5, r3\n-\tblt.n\t23213c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94308>\n+\tblt.n\t23214c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94318>\n \tmovs\tr4, r3\n-\tble.n\t2320ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x942b8>\n+\tble.n\t2320fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x942c8>\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_set():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:667\n \tpush\t{r3, r4, r5, lr}\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:669\n \tldrd\tr2, r3, [r0, #16]\n \tcmp\tr2, r3\n@@ -1129845,19 +1129845,19 @@\n \tmov.w\tr2, #728\t@ 0x2d8\n \tldr\tr1, [pc, #16]\t@ (232208 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x943d4>)\n \tldr\tr0, [pc, #16]\t@ (23220c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x943d8>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tlsls\tr2, r2, #3\n+\tlsls\tr2, r3, #3\n \tmovs\tr5, r3\n-\tlsls\tr0, r7, #7\n+\tlsls\tr0, r0, #8\n \tmovs\tr5, r3\n-\tlsls\tr2, r4, #8\n+\tlsls\tr2, r5, #8\n \tmovs\tr5, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_combining():\n /usr/include/c++/10/bits/stl_iterator.h:1100\n \tldrd\tr2, r3, [r0, #16]\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:690\n \tcmp\tr2, r3\n \tbeq.n\t23225e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9442a>\n@@ -1129922,19 +1129922,19 @@\n \tldr\tr1, [pc, #16]\t@ (23227c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94448>)\n \tldr\tr0, [pc, #20]\t@ (232280 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9444c>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tlsls\tr0, r4, #1\n+\tlsls\tr0, r5, #1\n \tmovs\tr5, r3\n-\tlsls\tr6, r0, #6\n+\tlsls\tr6, r1, #6\n \tmovs\tr5, r3\n-\tlsls\tr0, r6, #6\n+\tlsls\tr0, r7, #6\n \tmovs\tr5, r3\n boost::exception_detail::copy_boost_exception(boost::exception*, boost::exception const*):\n /usr/include/boost/exception/exception.hpp:415\n \tldr\tr2, [pc, #216]\t@ (232360 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9452c>)\n \tldr\tr3, [pc, #220]\t@ (232364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94530>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, lr}\n@@ -1133326,15 +1133326,15 @@\n \tnop\n \tldr\tr6, [sp, #424]\t@ 0x1a8\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [sp, #728]\t@ 0x2d8\n \tmovs\tr7, r4\n-\tldrsb\tr0, [r2, r7]\n+\tldrsb\tr4, [r3, r7]\n \tmovs\tr3, r3\n boost::cpp_regex_traits::isctype(char, unsigned int) const:\n /usr/include/boost/regex/v4/cpp_regex_traits.hpp:995\n \tmovw\tr3, #32518\t@ 0x7f06\n /usr/include/boost/regex/v4/cpp_regex_traits.hpp:976\n \tmov\tip, r0\n /usr/include/boost/regex/v4/cpp_regex_traits.hpp:996\n@@ -1133435,19 +1133435,19 @@\n \tmov.w\tr2, #728\t@ 0x2d8\n \tldr\tr1, [pc, #16]\t@ (233e74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96040>)\n \tldr\tr0, [pc, #16]\t@ (233e78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96044>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tb.n\t233740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9590c>\n+\tb.n\t233750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9591c>\n \tmovs\tr4, r3\n-\tb.n\t233990 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x95b5c>\n+\tb.n\t2339a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x95b6c>\n \tmovs\tr4, r3\n-\tb.n\t2339e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x95bb4>\n+\tb.n\t2339f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x95bc4>\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_word_end():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:568\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/stl_iterator.h:1100\n \tldr\tr7, [r0, #20]\n@@ -1134371,25 +1134371,25 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldrh\tr0, [r6, #58]\t@ 0x3a\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr0, [r6, #54]\t@ 0x36\n \tmovs\tr7, r4\n-\tudf\t#64\t@ 0x40\n+\tudf\t#72\t@ 0x48\n \tmovs\tr4, r3\n-\tsvc\t102\t@ 0x66\n+\tsvc\t110\t@ 0x6e\n \tmovs\tr4, r3\n-\tsvc\t144\t@ 0x90\n+\tsvc\t152\t@ 0x98\n \tmovs\tr4, r3\n-\tb.n\t23426c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96438>\n+\tb.n\t23427c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96448>\n \tmovs\tr4, r3\n-\tsvc\t78\t@ 0x4e\n+\tsvc\t86\t@ 0x56\n \tmovs\tr4, r3\n-\tsvc\t120\t@ 0x78\n+\tsvc\t128\t@ 0x80\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_long_set():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:650\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:654\n \tldrd\tr1, r0, [r0, #16]\n@@ -1134439,19 +1134439,19 @@\n \tmovw\tr2, #645\t@ 0x285\n \tldr\tr1, [pc, #16]\t@ (234538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96704>)\n \tldr\tr0, [pc, #16]\t@ (23453c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96708>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tb.n\t2343cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96598>\n+\tb.n\t2343dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x965a8>\n \tmovs\tr4, r3\n-\tb.n\t23451c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x966e8>\n+\tb.n\t23452c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x966f8>\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xe81a001c\n+\t\t\t@ instruction: 0xe822001c\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::unwind_long_set_repeat(bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1692\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1695\n \tldr.w\tr9, [r0, #112]\t@ 0x70\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1692\n@@ -1134698,48 +1134698,48 @@\n \tldr\tr1, [pc, #76]\t@ (23473c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96908>)\n \tldr\tr0, [pc, #80]\t@ (234740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9690c>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tb.n\t2342d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9649c>\n+\tb.n\t2342e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x964ac>\n \tmovs\tr4, r3\n-\tb.n\t234420 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x965ec>\n+\tb.n\t234430 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x965fc>\n \tmovs\tr4, r3\n-\tb.n\t234478 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96644>\n+\tb.n\t234488 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96654>\n \tmovs\tr4, r3\n-\tb.n\t234484 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96650>\n+\tb.n\t234494 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96660>\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb67a\n+\t\t\t@ instruction: 0xb682\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb6b4\n+\t\t\t@ instruction: 0xb6bc\n \tmovs\tr4, r3\n-\tb.n\t234468 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96634>\n+\tb.n\t234478 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96644>\n \tmovs\tr4, r3\n-\tcpsie\tai\n+\t\t\t@ instruction: 0xb66e\n \tmovs\tr4, r3\n-\tstrex\tr0, r0, [r0, #112]\t@ 0x70\n-\tb.n\t23444c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96618>\n+\tstrex\tr0, r0, [r8, #112]\t@ 0x70\n+\tb.n\t23445c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x96628>\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb652\n+\t\t\t@ instruction: 0xb65a\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb828\n+\t\t\t@ instruction: 0xb830\n \tmovs\tr4, r3\n-\tb.n\t234430 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x965fc>\n+\tb.n\t234440 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9660c>\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb63e\n+\t\t\t@ instruction: 0xb646\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb800\n+\t\t\t@ instruction: 0xb808\n \tmovs\tr4, r3\n-\tb.n\t234414 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x965e0>\n+\tb.n\t234424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x965f0>\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb62a\n+\t\t\t@ instruction: 0xb632\n \tmovs\tr4, r3\n-\tb.n\t2346f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x968c0>\n+\tb.n\t234704 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x968d0>\n \tmovs\tr4, r3\n boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >::match_results(boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > > const&):\n /usr/include/boost/regex/v4/match_results.hpp:97\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr3, #0\n /usr/include/boost/regex/v4/match_results.hpp:97\n@@ -1135629,15 +1135629,15 @@\n \tblx\tb080 <__cxa_begin_catch@plt>\n \tb.n\t234e38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x97004>\n \tnop\n \tstrh\tr4, [r3, #44]\t@ 0x2c\n \tmovs\tr7, r4\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tsubs\tr6, r2, #0\n+\tsubs\tr2, r4, #0\n \tmovs\tr3, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::unwind_recursion(bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1777\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n \tldr.w\tr0, [pc, #3528]\t@ 235c7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x97e48>\n \tsub\tsp, #108\t@ 0x6c\n@@ -1137757,19 +1137757,19 @@\n \tnop\n \tldr\tr4, [r5, #124]\t@ 0x7c\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr4, [r3, #116]\t@ 0x74\n \tmovs\tr7, r4\n-\tstmia\tr2!, {r1, r2, r3, r4, r5, r6}\n+\tstmia\tr2!, {r1, r2, r7}\n \tmovs\tr4, r3\n-\tstmia\tr3!, {r2, r5, r7}\n+\tstmia\tr3!, {r2, r3, r5, r7}\n \tmovs\tr4, r3\n-\tstmia\tr3!, {r1, r2, r3, r6, r7}\n+\tstmia\tr3!, {r1, r2, r4, r6, r7}\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::extend_stack():\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:231\n \tldr\tr3, [r0, #116]\t@ 0x74\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:229\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -1138140,19 +1138140,19 @@\n \tmovw\tr2, #645\t@ 0x285\n \tldr\tr1, [pc, #16]\t@ (2362d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x984a4>)\n \tldr\tr0, [pc, #16]\t@ (2362dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x984a8>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tldmia\tr1, {r1, r3, r5, r7}\n+\tldmia\tr1, {r1, r4, r5, r7}\n \tmovs\tr4, r3\n-\tldmia\tr2!, {r4, r6}\n+\tldmia\tr2!, {r3, r4, r6}\n \tmovs\tr4, r3\n-\tldmia\tr2!, {r1, r3, r4, r5, r6}\n+\tldmia\tr2!, {r1, r7}\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_set_repeat():\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:862\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:871\n \tldr.w\tsl, [r0, #44]\t@ 0x2c\n@@ -1138493,19 +1138493,19 @@\n \tldr\tr1, [pc, #16]\t@ (236534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x98700>)\n \tldr\tr0, [pc, #20]\t@ (236538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x98704>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tpop\t{r3, r5, r7, pc}\n+\tpop\t{r4, r5, r7, pc}\n \tmovs\tr4, r3\n-\tbkpt\t0x00ce\n+\tbkpt\t0x00d6\n \tmovs\tr4, r3\n-\tbkpt\t0x00f8\n+\tnop\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_char_repeat():\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:787\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:796\n \tldr.w\tr8, [r0, #44]\t@ 0x2c\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:797\n@@ -1138845,25 +1138845,25 @@\n \tldr\tr1, [pc, #28]\t@ (236794 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x98960>)\n \tldr\tr0, [pc, #32]\t@ (236798 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x98964>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tcbnz\tr0, 2367e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x989ae>\n+\tcbnz\tr0, 2367e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x989b0>\n \tmovs\tr4, r3\n-\tpop\t{r1, r2, r3, r7}\n+\tpop\t{r1, r2, r4, r7}\n \tmovs\tr4, r3\n-\tpop\t{r3, r4, r5, r7}\n+\tpop\t{r6, r7}\n \tmovs\tr4, r3\n-\tstmia\tr7!, {r4, r5, r7}\n+\tstmia\tr7!, {r3, r4, r5, r7}\n \tmovs\tr4, r3\n-\tstr\tr5, [sp, #648]\t@ 0x288\n+\tstr\tr5, [sp, #680]\t@ 0x2a8\n \tmovs\tr4, r3\n-\tldmia\tr1!, {r2, r4}\n+\tldmia\tr1!, {r2, r3, r4}\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_dot_repeat_slow():\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:703\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:706\n \tldr\tr6, [r0, #44]\t@ 0x2c\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:703\n@@ -1140569,19 +1140569,19 @@\n \tbl\t232574 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x94740>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tstr\tr4, [r6, #56]\t@ 0x38\n \tmovs\tr7, r4\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tpop\t{r1, r5, r7}\n+\tpop\t{r1, r3, r5, r7}\n \tmovs\tr4, r3\n-\tcbz\tr4, 237480 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9964c>\n+\tcbz\tr4, 237482 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9964e>\n \tmovs\tr4, r3\n-\tbkpt\t0x005e\n+\tbkpt\t0x0066\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::skip_until_paren(int, bool):\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1181\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr6, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1183\n \tldr\tr4, [r0, #44]\t@ 0x2c\n@@ -1142523,19 +1142523,19 @@\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr0, [r1, r4]\n \tmovs\tr7, r4\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #816\t@ 0x330\n+\tadd\tr7, sp, #848\t@ 0x350\n \tmovs\tr4, r3\n-\tldrb\tr6, [r0, #9]\n+\tldrb\tr6, [r1, #9]\n \tmovs\tr4, r3\n-\tcbz\tr4, 23832e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9a4fa>\n+\tcbz\tr4, 238330 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9a4fc>\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_all_states():\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:159\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:151\n \tldr\tr3, [r0, #124]\t@ 0x7c\n@@ -1143275,31 +1143275,31 @@\n \tldr.w\tr3, [r8], #8\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:630\n \tcmp\tip, r8\n \tbeq.w\t238502 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9a6ce>\n /usr/include/boost/regex/v4/match_results.hpp:231\n \tbl\tc97c \n \tnop\n-\tadd\tr7, sp, #520\t@ 0x208\n+\tadd\tr7, sp, #552\t@ 0x228\n \tmovs\tr4, r3\n-\tsub\tsp, #400\t@ 0x190\n+\tsub\tsp, #432\t@ 0x1b0\n \tmovs\tr4, r3\n-\tcbz\tr6, 23885c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9aa28>\n+\tcbz\tr6, 23885e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9aa2a>\n \tmovs\tr4, r3\n-\tldr\tr2, [sp, #824]\t@ 0x338\n+\tldr\tr2, [sp, #856]\t@ 0x358\n \tmovs\tr4, r3\n-\tldr\tr3, [sp, #976]\t@ 0x3d0\n+\tldr\tr3, [sp, #1008]\t@ 0x3f0\n \tmovs\tr4, r3\n-\tldr\tr4, [sp, #120]\t@ 0x78\n+\tldr\tr4, [sp, #152]\t@ 0x98\n \tmovs\tr4, r3\n-\tadd\tr4, pc, #392\t@ (adr r4, 2389f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9abbc>)\n+\tadd\tr4, pc, #424\t@ (adr r4, 238a10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9abdc>)\n \tmovs\tr4, r3\n-\tadd\tr5, pc, #32\t@ (adr r5, 23888c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9aa58>)\n+\tadd\tr5, pc, #64\t@ (adr r5, 2388ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9aa78>)\n \tmovs\tr4, r3\n-\tadd\tr5, pc, #200\t@ (adr r5, 238938 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9ab04>)\n+\tadd\tr5, pc, #232\t@ (adr r5, 238958 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9ab24>)\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_match():\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:1086\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n \tldr.w\tr3, [pc, #2092]\t@ 2390a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b270>\n \tsub\tsp, #44\t@ 0x2c\n@@ -1144277,25 +1144277,25 @@\n /usr/include/boost/regex/v4/match_results.hpp:231\n \tbl\tc97c \n \tnop\n \tmov\tip, ip\n \tmovs\tr7, r4\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #680\t@ (adr r5, 239358 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b524>)\n+\tadd\tr5, pc, #712\t@ (adr r5, 239378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b544>)\n \tmovs\tr4, r3\n-\tldr\tr0, [r5, #72]\t@ 0x48\n+\tldr\tr0, [r6, #72]\t@ 0x48\n \tmovs\tr4, r3\n-\tadd\tr7, pc, #24\t@ (adr r7, 2390d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b29c>)\n+\tadd\tr7, pc, #56\t@ (adr r7, 2390f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b2bc>)\n \tmovs\tr4, r3\n-\tadd\tr7, pc, #72\t@ (adr r7, 239104 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b2d0>)\n+\tadd\tr7, pc, #104\t@ (adr r7, 239124 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b2f0>)\n \tmovs\tr4, r3\n-\tstr\tr5, [sp, #336]\t@ 0x150\n+\tstr\tr5, [sp, #368]\t@ 0x170\n \tmovs\tr4, r3\n-\tadd\tr0, sp, #248\t@ 0xf8\n+\tadd\tr0, sp, #280\t@ 0x118\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_assert_backref():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:757\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:762\n \tmovw\tr3, #9999\t@ 0x270f\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:760\n@@ -1145023,19 +1145023,19 @@\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n /usr/include/boost/regex/v4/match_results.hpp:231\n \tbl\tc97c \n \tnop\n-\tstr\tr6, [sp, #480]\t@ 0x1e0\n+\tstr\tr6, [sp, #512]\t@ 0x200\n \tmovs\tr4, r3\n-\tstr\tr7, [sp, #120]\t@ 0x78\n+\tstr\tr7, [sp, #152]\t@ 0x98\n \tmovs\tr4, r3\n-\tstr\tr7, [sp, #288]\t@ 0x120\n+\tstr\tr7, [sp, #320]\t@ 0x140\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_startmark():\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:398\n \tldr\tr3, [r0, #44]\t@ 0x2c\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:396\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n@@ -1145432,37 +1145432,37 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:524\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n /usr/include/boost/regex/v4/match_results.hpp:237\n \tadds\tr7, #16\n \tb.n\t2396ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9b87a>\n-\tadd\tr0, pc, #560\t@ (adr r0, 239b14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9bce0>)\n+\tadd\tr0, pc, #592\t@ (adr r0, 239b34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9bd00>)\n \tmovs\tr4, r3\n-\tstr\tr6, [r0, #76]\t@ 0x4c\n+\tstr\tr6, [r1, #76]\t@ 0x4c\n \tmovs\tr4, r3\n-\tadd\tr1, pc, #944\t@ (adr r1, 239c9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9be68>)\n+\tadd\tr1, pc, #976\t@ (adr r1, 239cbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9be88>)\n \tmovs\tr4, r3\n-\tldrh\tr0, [r0, #30]\n+\tldrh\tr0, [r1, #30]\n \tmovs\tr4, r3\n-\tldrh\tr6, [r6, #42]\t@ 0x2a\n+\tldrh\tr6, [r7, #42]\t@ 0x2a\n \tmovs\tr4, r3\n-\tldrh\tr4, [r4, #44]\t@ 0x2c\n+\tldrh\tr4, [r5, #44]\t@ 0x2c\n \tmovs\tr4, r3\n-\tadd\tr0, pc, #400\t@ (adr r0, 239a8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9bc58>)\n+\tadd\tr0, pc, #432\t@ (adr r0, 239aac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9bc78>)\n \tmovs\tr4, r3\n-\tstr\tr6, [r3, #72]\t@ 0x48\n+\tstr\tr6, [r4, #72]\t@ 0x48\n \tmovs\tr4, r3\n-\tadd\tr1, pc, #912\t@ (adr r1, 239c94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9be60>)\n+\tadd\tr1, pc, #944\t@ (adr r1, 239cb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9be80>)\n \tmovs\tr4, r3\n-\tadd\tr0, pc, #224\t@ (adr r0, 2399e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9bbb4>)\n+\tadd\tr0, pc, #256\t@ (adr r0, 239a08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9bbd4>)\n \tmovs\tr4, r3\n-\tstr\tr2, [r6, #68]\t@ 0x44\n+\tstr\tr2, [r7, #68]\t@ 0x44\n \tmovs\tr4, r3\n-\tadd\tr1, pc, #912\t@ (adr r1, 239ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9be6c>)\n+\tadd\tr1, pc, #944\t@ (adr r1, 239cc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9be8c>)\n \tmovs\tr4, r3\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_imp():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:210\n \tldr.w\tr2, [pc, #2944]\t@ 23a494 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9c660>\n \tldr.w\tr3, [pc, #2944]\t@ 23a498 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9c664>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1147426,37 +1147426,37 @@\n \tmovs\tr7, #0\n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:118\n \tblx\tbd7c \n /usr/include/boost/regex/v4/perl_matcher_non_recursive.hpp:119\n \tstr\tr7, [r4, #108]\t@ 0x6c\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tldrh\tr0, [r4, #8]\n+\tldrh\tr0, [r5, #8]\n \tmovs\tr4, r3\n-\tldrb\tr2, [r6, #24]\n+\tldrb\tr2, [r7, #24]\n \tmovs\tr4, r3\n-\tldrh\tr4, [r3, #22]\n+\tldrh\tr4, [r4, #22]\n \tmovs\tr4, r3\n-\tstr\tr4, [sp, #96]\t@ 0x60\n+\tstr\tr4, [sp, #128]\t@ 0x80\n \tmovs\tr4, r3\n-\tldrb\tr2, [r3, #24]\n+\tldrb\tr2, [r4, #24]\n \tmovs\tr4, r3\n-\tstr\tr1, [sp, #16]\n+\tstr\tr1, [sp, #48]\t@ 0x30\n \tmovs\tr4, r3\n-\tstr\tr3, [sp, #384]\t@ 0x180\n+\tstr\tr3, [sp, #416]\t@ 0x1a0\n \tmovs\tr4, r3\n-\tstrh\tr2, [r0, #42]\t@ 0x2a\n+\tstrh\tr2, [r1, #42]\t@ 0x2a\n \tmovs\tr4, r3\n-\tstrh\tr4, [r5, #42]\t@ 0x2a\n+\tstrh\tr4, [r6, #42]\t@ 0x2a\n \tmovs\tr4, r3\n-\tstr\tr2, [sp, #712]\t@ 0x2c8\n+\tstr\tr2, [sp, #744]\t@ 0x2e8\n \tmovs\tr4, r3\n-\tstrb\tr0, [r6, r4]\n+\tstrb\tr0, [r7, r4]\n \tmovs\tr4, r3\n-\tstr\tr3, [sp, #232]\t@ 0xe8\n+\tstr\tr3, [sp, #264]\t@ 0x108\n \tmovs\tr4, r3\n bool boost::regex_match<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, char, boost::regex_traits > >(__gnu_cxx::__normal_iterator, std::allocator > >, __gnu_cxx::__normal_iterator, std::allocator > >, boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >&, boost::basic_regex > > const&, boost::regex_constants::_match_flags):\n /usr/include/boost/regex/v4/regex_match.hpp:44\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr4, [pc, #500]\t@ (23aa50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9cc1c>)\n \tsub\tsp, #136\t@ 0x88\n \tldr\tr7, [pc, #500]\t@ (23aa54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9cc20>)\n@@ -1147760,25 +1147760,25 @@\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr5, #222\t@ 0xde\n \tmovs\tr7, r4\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tstrh\tr6, [r3, #10]\n+\tstrh\tr6, [r4, #10]\n \tmovs\tr4, r3\n-\tldrb\tr4, [r4, #7]\n+\tldrb\tr4, [r5, #7]\n \tmovs\tr4, r3\n-\tldrb\tr6, [r1, #8]\n+\tldrb\tr6, [r2, #8]\n \tmovs\tr4, r3\n-\tstr\tr2, [sp, #936]\t@ 0x3a8\n+\tstr\tr2, [sp, #968]\t@ 0x3c8\n \tmovs\tr4, r3\n-\tstrh\tr0, [r7, #22]\n+\tstrh\tr0, [r0, #24]\n \tmovs\tr4, r3\n-\tstrh\tr2, [r4, #24]\n+\tstrh\tr2, [r5, #24]\n \tmovs\tr4, r3\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*) [clone .constprop.0] [clone .isra.0]:\n /usr/include/c++/10/ostream:606\n \tpush\t{r3, r4, r5, lr}\n \tldr\tr5, [pc, #52]\t@ (23aab8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9cc84>)\n@@ -1148873,35 +1148873,35 @@\n \tmovs\tr0, r0\n \tmovs\tr2, #60\t@ 0x3c\n \tmovs\tr7, r4\n \tmovs\tr1, #24\n \tmovs\tr7, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr2, [r3, #58]\t@ 0x3a\n+\tldrh\tr2, [r4, #58]\t@ 0x3a\n \tmovs\tr4, r3\n-\tldrh\tr2, [r3, #58]\t@ 0x3a\n+\tldrh\tr2, [r4, #58]\t@ 0x3a\n \tmovs\tr4, r3\n-\tldrh\tr2, [r4, #54]\t@ 0x36\n+\tldrh\tr2, [r5, #54]\t@ 0x36\n \tmovs\tr4, r3\n-\tldrh\tr2, [r1, #54]\t@ 0x36\n+\tldrh\tr2, [r2, #54]\t@ 0x36\n \tmovs\tr4, r3\n-\tldrh\tr2, [r6, #52]\t@ 0x34\n+\tldrh\tr2, [r7, #52]\t@ 0x34\n \tmovs\tr4, r3\n-\tldrb\tr6, [r3, #5]\n+\tldrb\tr6, [r4, #5]\n \tmovs\tr3, r3\n-\tldrb\tr4, [r1, #5]\n+\tldrb\tr4, [r2, #5]\n \tmovs\tr3, r3\n-\tldrb\tr2, [r6, #3]\n+\tldrb\tr2, [r7, #3]\n \tmovs\tr3, r3\n-\tldrb\tr2, [r4, #3]\n+\tldrb\tr2, [r5, #3]\n \tmovs\tr3, r3\n-\tldrb\tr2, [r1, #4]\n+\tldrb\tr2, [r2, #4]\n \tmovs\tr3, r3\n-\tldrh\tr2, [r3, #48]\t@ 0x30\n+\tldrh\tr2, [r4, #48]\t@ 0x30\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Assembly::warnAtSmileCoverage():\n ./src/mira/assembly_misc.C:2186\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n@@ -1149157,17 +1149157,17 @@\n \tnop\n \tadds\tr4, r0, #5\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr2, r0, #4\n \tmovs\tr7, r4\n-\tldrh\tr4, [r5, #26]\n+\tldrh\tr4, [r6, #26]\n \tmovs\tr4, r3\n-\tldrh\tr6, [r5, #24]\n+\tldrh\tr6, [r6, #24]\n \tmovs\tr4, r3\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n@@ -1150078,19 +1150078,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tblt.n\t23ba24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9dbf0>\n+\tblt.n\t23ba3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9dc08>\n \tmovs\tr2, r3\n-\tblt.n\t23ba10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9dbdc>\n+\tblt.n\t23ba28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9dbf4>\n \tmovs\tr2, r3\n-\tlsls\tr0, r2, #13\n+\tlsls\tr0, r3, #13\n \tmovs\tr5, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1150445,17 +1150445,17 @@\n \tmov\tr0, r5\n \tldr\tr5, [pc, #32]\t@ (23bdfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9dfc8>)\n \tldr.w\tr1, [r9, ip]\n \tldr.w\tr2, [r9, r5]\n \tblx\tb700 <__cxa_throw@plt>\n \tnop\n \t...\n-\tstrh\tr2, [r2, #18]\n+\tstrh\tr2, [r3, #18]\n \tmovs\tr4, r3\n-\tstrh\tr4, [r0, #18]\n+\tstrh\tr4, [r1, #18]\n \tmovs\tr4, r3\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n@@ -1150463,19 +1150463,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbvc.n\t23bdc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9df94>\n+\tbvc.n\t23bde0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9dfac>\n \tmovs\tr2, r3\n-\tbvc.n\t23bdb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9df80>\n+\tbvc.n\t23bdcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9df98>\n \tmovs\tr2, r3\n-\tvshr.u16\td0, d12, #6\n+\tvshr.u32\td0, d12, #30\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tldr\tr0, [sp, #12]\n \tmovw\tr6, #43691\t@ 0xaaab\n \tmovt\tr6, #2730\t@ 0xaaa\n ./src/mira/../../src/mira/hdeque.H:491\n \tldr\tr4, [sp, #24]\n@@ -1151358,25 +1151358,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr1!, {r2, r5}\n+\tldmia\tr1!, {r2, r3, r5}\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r2, r5, r7}\n+\tldmia\tr0!, {r2, r3, r5, r7}\n \tmovs\tr3, r3\n-\tadd\tr0, sp, #88\t@ 0x58\n+\tadd\tr0, sp, #136\t@ 0x88\n \tmovs\tr2, r3\n /usr/include/c++/10/sstream:584\n \tmov\tr0, r5\n /usr/include/c++/10/ostream:93\n \tadd.w\tr9, sp, #288\t@ 0x120\n /usr/include/c++/10/sstream:584\n \tbl\t15970 , std::allocator >::~basic_stringbuf()@@Base>\n@@ -1151953,19 +1151953,19 @@\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr2, r5, #7\n \tmovs\tr7, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr0, [r6, #4]\n+\tldrb\tr0, [r7, #4]\n \tmovs\tr4, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbvc.n\t23c994 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9eb60>\n+\tbvc.n\t23c9ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9eb78>\n \tmovs\tr2, r3\n \tlsrs\tr2, r7, #2\n \tmovs\tr7, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1151973,31 +1151973,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr5, {r2, r4, r5, r6}\n+\tldmia\tr5!, {r7}\n \tmovs\tr2, r3\n-\tldmia\tr5, {r4, r5, r6}\n+\tldmia\tr5, {r2, r3, r4, r5, r6}\n \tmovs\tr2, r3\n-\tb.n\t23d0f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f2c0>\n+\tb.n\t23d104 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f2d0>\n \tmovs\tr4, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr4, {r1, r2, r3, r4, r5}\n+\tldmia\tr4!, {r1, r3, r6}\n \tmovs\tr2, r3\n-\tldmia\tr4, {r1, r3, r4, r5}\n+\tldmia\tr4!, {r1, r2, r6}\n \tmovs\tr2, r3\n-\tb.n\t23cea0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f06c>\n+\tb.n\t23ceb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f07c>\n \tmovs\tr4, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr7, [pc, #488]\t@ (23cba0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9ed6c>)\n \tadd.w\tsl, sp, #96\t@ 0x60\n \tmov\tr0, sl\n \tmov\tr9, r5\n \tmov\tr5, ip\n@@ -1152244,19 +1152244,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr2, {r1, r2, r3, r6, r7}\n+\tldmia\tr2!, {r1, r3, r4, r6, r7}\n \tmovs\tr2, r3\n-\tldmia\tr2!, {r1, r6, r7}\n+\tldmia\tr2, {r1, r2, r3, r6, r7}\n \tmovs\tr2, r3\n-\t\t\t@ instruction: 0xf292001c\n+\t\t\t@ instruction: 0xf29a001c\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::warnAtHighCoverages(unsigned int):\n@@ -1153141,53 +1153141,53 @@\n \tnop\n \tlsls\tr4, r0, #14\n \tmovs\tr7, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr6, r3, #13\n \tmovs\tr7, r4\n-\tstrb\tr2, [r5, #10]\n+\tstrb\tr2, [r6, #10]\n \tmovs\tr4, r3\n-\tstrb\tr4, [r4, #10]\n+\tstrb\tr4, [r5, #10]\n \tmovs\tr4, r3\n-\tstrb\tr0, [r2, #10]\n+\tstrb\tr0, [r3, #10]\n \tmovs\tr4, r3\n-\tstrb\tr0, [r0, #10]\n+\tstrb\tr0, [r1, #10]\n \tmovs\tr4, r3\n-\tstrb\tr6, [r7, #8]\n+\tstrb\tr6, [r0, #9]\n \tmovs\tr4, r3\n-\tstrb\tr4, [r7, #6]\n+\tstrb\tr4, [r0, #7]\n \tmovs\tr4, r3\n-\tstrb\tr4, [r3, #6]\n+\tstrb\tr4, [r4, #6]\n \tmovs\tr4, r3\n-\tstrb\tr6, [r7, #16]\n+\tstrb\tr6, [r0, #17]\n \tmovs\tr4, r3\n-\tstrb\tr4, [r4, #17]\n+\tstrb\tr4, [r5, #17]\n \tmovs\tr4, r3\n-\tstrb\tr6, [r6, #18]\n+\tstrb\tr6, [r7, #18]\n \tmovs\tr4, r3\n-\tstrb\tr2, [r0, #20]\n+\tstrb\tr2, [r1, #20]\n \tmovs\tr4, r3\n-\tstrb\tr6, [r1, #19]\n+\tstrb\tr6, [r2, #19]\n \tmovs\tr4, r3\n-\tldr\tr6, [r4, #112]\t@ 0x70\n+\tldr\tr6, [r5, #112]\t@ 0x70\n \tmovs\tr4, r3\n-\tcbnz\tr4, 23d296 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f462>\n+\tcbnz\tr0, 23d29a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f466>\n \tmovs\tr2, r3\n-\tcbnz\tr4, 23d298 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f464>\n+\tcbnz\tr0, 23d29c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f468>\n \tmovs\tr2, r3\n-\tcbnz\tr4, 23d29a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f466>\n+\tcbnz\tr0, 23d29e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f46a>\n \tmovs\tr2, r3\n-\tcbnz\tr4, 23d29c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f468>\n+\tcbnz\tr0, 23d2a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f46c>\n \tmovs\tr2, r3\n-\tcbnz\tr4, 23d29e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f46a>\n+\tcbnz\tr0, 23d2a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f46e>\n \tmovs\tr2, r3\n-\tcbnz\tr4, 23d2a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f46c>\n+\tcbnz\tr0, 23d2a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f470>\n \tmovs\tr2, r3\n-\tcbnz\tr4, 23d2a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f46e>\n+\tcbnz\tr0, 23d2a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9f472>\n \tmovs\tr2, r3\n Assembly::performNewProposedCutbackClips(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/assembly_misc.C:534\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #3316]\t@ 23df78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa0144>\n \tvpush\t{d8-d10}\n@@ -1154813,124 +1154813,124 @@\n \tnop\n \tstc2l\t0, cr0, [lr], {38}\t@ 0x26\n \tstc2l\t0, cr0, [r8], {38}\t@ 0x26\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [r3, #124]\t@ 0x7c\n+\tldr\tr6, [r4, #124]\t@ 0x7c\n \tmovs\tr4, r3\n-\tstrb\tr0, [r2, #0]\n+\tstrb\tr0, [r3, #0]\n \tmovs\tr4, r3\n-\tpush\t{r1, r4, r6, r7, lr}\n+\tpush\t{r1, r3, r4, r6, r7, lr}\n \tmovs\tr3, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tstrb\tr0, [r0, #2]\n+\tstrb\tr0, [r1, #2]\n \tmovs\tr4, r3\n-\tldr\tr2, [r3, #124]\t@ 0x7c\n+\tldr\tr2, [r4, #124]\t@ 0x7c\n \tmovs\tr4, r3\n-\tstrb\tr4, [r6, #2]\n+\tstrb\tr4, [r7, #2]\n \tmovs\tr4, r3\n-\tstrb\tr2, [r5, #2]\n+\tstrb\tr2, [r6, #2]\n \tmovs\tr4, r3\n-\tasrs\tr4, r1, #25\n+\tasrs\tr4, r2, #25\n \tmovs\tr4, r3\n-\titet\tcs\n-\tmovcs\tr2, r3\n-\tstrbcc\tr2, [r5, #1]\n-\tmovcs\tr4, r3\n+\titet\tcc\n+\tmovcc\tr2, r3\n+\tstrbcs\tr2, [r6, #1]\n+\tmovcc\tr4, r3\n \tldr\tr3, [pc, #544]\t@ (23e1e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa03ac>)\n \tmovs\tr0, r5\n-\tstrb\tr2, [r1, #3]\n+\tstrb\tr2, [r2, #3]\n \tmovs\tr4, r3\n-\tstr\tr2, [r0, #76]\t@ 0x4c\n+\tstr\tr2, [r1, #76]\t@ 0x4c\n \tmovs\tr6, r3\n-\tstrb\tr4, [r3, #4]\n+\tstrb\tr4, [r4, #4]\n \tmovs\tr4, r3\n-\tldrh\tr4, [r0, #2]\n+\tldrh\tr4, [r1, #2]\n \tmovs\tr3, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrb\tr4, [r4, #2]\n+\tstrb\tr4, [r5, #2]\n \tmovs\tr4, r3\n-\tstrb\tr6, [r5, #2]\n+\tstrb\tr6, [r6, #2]\n \tmovs\tr4, r3\n-\tstrb\tr4, [r6, #2]\n+\tstrb\tr4, [r7, #2]\n \tmovs\tr4, r3\n-\tstrb\tr2, [r7, #2]\n+\tstrb\tr2, [r0, #3]\n \tmovs\tr4, r3\n-\tstrb\tr4, [r0, #3]\n+\tstrb\tr4, [r1, #3]\n \tmovs\tr4, r3\n-\tldrh\tr6, [r3, #40]\t@ 0x28\n+\tldrh\tr2, [r5, #40]\t@ 0x28\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf6320026\n-\tldr\tr2, [r5, #40]\t@ 0x28\n+\tldr\tr2, [r6, #40]\t@ 0x28\n \tmovs\tr4, r3\n-\tldr\tr6, [r5, #40]\t@ 0x28\n+\tldr\tr6, [r6, #40]\t@ 0x28\n \tmovs\tr4, r3\n-\tldr\tr0, [r3, #40]\t@ 0x28\n+\tldr\tr0, [r4, #40]\t@ 0x28\n \tmovs\tr4, r3\n-\tldr\tr6, [r0, #40]\t@ 0x28\n+\tldr\tr6, [r1, #40]\t@ 0x28\n \tmovs\tr4, r3\n-\tldr\tr0, [r0, #40]\t@ 0x28\n+\tldr\tr0, [r1, #40]\t@ 0x28\n \tmovs\tr4, r3\n-\tlsls\tr6, r3, #14\n+\tlsls\tr6, r4, #14\n \tmovs\tr4, r3\n-\tlsls\tr4, r0, #14\n+\tlsls\tr4, r1, #14\n \tmovs\tr4, r3\n-\tstmia\tr7!, {r1, r4, r6}\n+\tstmia\tr7!, {r1, r3, r4, r6}\n \tmovs\tr5, r3\n-\tlsls\tr2, r4, #13\n-\tmovs\tr4, r3\n-\tldr\tr6, [r7, #44]\t@ 0x2c\n+\tlsls\tr2, r5, #13\n \tmovs\tr4, r3\n \tldr\tr6, [r0, #48]\t@ 0x30\n \tmovs\tr4, r3\n-\tldr\tr6, [r1, #44]\t@ 0x2c\n+\tldr\tr6, [r1, #48]\t@ 0x30\n \tmovs\tr4, r3\n-\tldr\tr4, [r3, #32]\n+\tldr\tr6, [r2, #44]\t@ 0x2c\n \tmovs\tr4, r3\n-\tlsrs\tr4, r6, #31\n+\tldr\tr4, [r4, #32]\n+\tmovs\tr4, r3\n+\tlsrs\tr4, r7, #31\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb8d4\n+\t\t\t@ instruction: 0xb8e0\n \tmovs\tr2, r3\n-\tstr\tr6, [r5, #104]\t@ 0x68\n+\tstr\tr6, [r6, #104]\t@ 0x68\n \tmovs\tr4, r3\n-\tstr\tr6, [r7, #104]\t@ 0x68\n+\tstr\tr6, [r0, #108]\t@ 0x6c\n \tmovs\tr4, r3\n-\tstr\tr2, [r3, #108]\t@ 0x6c\n+\tstr\tr2, [r4, #108]\t@ 0x6c\n \tmovs\tr4, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr0, [r2, #96]\t@ 0x60\n+\tstr\tr0, [r3, #96]\t@ 0x60\n \tmovs\tr4, r3\n-\tldr\tr6, [r3, #24]\n+\tldr\tr6, [r4, #24]\n \tmovs\tr4, r3\n \tadd\tr6, r7\n \tmovs\tr0, r5\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tlsls\tr0, r4, #5\n \tmovs\tr7, r4\n-\tstr\tr0, [r4, #88]\t@ 0x58\n+\tstr\tr0, [r5, #88]\t@ 0x58\n \tmovs\tr4, r3\n-\tldr\tr2, [r2, #0]\n+\tldr\tr2, [r3, #0]\n \tmovs\tr4, r3\n-\tstr\tr2, [r6, #88]\t@ 0x58\n+\tstr\tr2, [r7, #88]\t@ 0x58\n \tmovs\tr4, r3\n ./src/mira/../../src/mira/readgrouplib.H:110\n \tldrb.w\tr7, [r9, #151]\t@ 0x97\n ./src/mira/../../src/mira/readgrouplib.H:314\n \tmov\tr0, r7\n \tbl\t29b24 \n \tldr\tr3, [sp, #40]\t@ 0x28\n@@ -1156997,65 +1156997,65 @@\n \tb.n\t23ef12 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa10de>\n \tb.n\t23f090 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa125c>\n \tnop\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrsh\tr2, [r4, r4]\n+\tldrsh\tr2, [r5, r4]\n \tmovs\tr4, r3\n-\tldrsh\tr2, [r0, r5]\n+\tldrsh\tr2, [r1, r5]\n \tmovs\tr4, r3\n-\tstr\tr0, [r6, #12]\n+\tstr\tr0, [r7, #12]\n \tmovs\tr4, r3\n-\tstr\tr0, [r4, #12]\n+\tstr\tr0, [r5, #12]\n \tmovs\tr4, r3\n-\tbvc.n\t23efdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa11a8>\n+\tbvc.n\t23efec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa11b8>\n \tmovs\tr4, r3\n-\tldrsh\tr6, [r7, r4]\n+\tldrsh\tr6, [r0, r5]\n \tmovs\tr4, r3\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstr\tr6, [r6, #4]\n+\tstr\tr6, [r7, #4]\n \tmovs\tr4, r3\n-\tstr\tr2, [r5, #4]\n+\tstr\tr2, [r6, #4]\n \tmovs\tr4, r3\n-\tbvs.n\t23f090 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa125c>\n+\tbvs.n\t23f0a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa126c>\n \tmovs\tr4, r3\n-\tldrsh\tr4, [r1, r2]\n+\tldrsh\tr4, [r2, r2]\n \tmovs\tr4, r3\n-\tldrsh\tr0, [r5, r5]\n+\tldrsh\tr0, [r6, r5]\n \tmovs\tr4, r3\n-\tldrsh\tr2, [r5, r4]\n+\tldrsh\tr2, [r6, r4]\n \tmovs\tr4, r3\n-\tldrsh\tr6, [r7, r3]\n+\tldrsh\tr6, [r0, r4]\n \tmovs\tr4, r3\n-\tldrb\tr4, [r0, r3]\n+\tldrb\tr4, [r1, r3]\n \tmovs\tr4, r3\n-\tldrb\tr6, [r5, r1]\n+\tldrb\tr6, [r6, r1]\n \tmovs\tr4, r3\n \tadds\tr5, #244\t@ 0xf4\n \tmovs\tr0, r5\n-\tldrh\tr0, [r2, r5]\n+\tldrh\tr0, [r3, r5]\n \tmovs\tr4, r3\n-\tldrh\tr2, [r4, r3]\n+\tldrh\tr2, [r5, r3]\n \tmovs\tr4, r3\n-\tldrh\tr0, [r4, r2]\n+\tldrh\tr0, [r5, r2]\n \tmovs\tr4, r3\n-\tldrsb\tr0, [r1, r4]\n+\tldrsb\tr0, [r2, r4]\n \tmovs\tr4, r3\n-\tldr\tr4, [sp, #464]\t@ 0x1d0\n+\tldr\tr4, [sp, #512]\t@ 0x200\n \tmovs\tr2, r3\n-\tldrsb\tr0, [r0, r3]\n+\tldrsb\tr0, [r1, r3]\n \tmovs\tr4, r3\n-\tldrsb\tr0, [r5, r3]\n+\tldrsb\tr0, [r6, r3]\n \tmovs\tr4, r3\n-\tldrsb\tr4, [r3, r0]\n+\tldrsb\tr4, [r4, r0]\n \tmovs\tr4, r3\n \tadds\tr3, #46\t@ 0x2e\n \tmovs\tr0, r5\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr3, [sp, #88]\t@ 0x58\n /usr/include/c++/10/bits/basic_string.h:231\n \tldr\tr2, [sp, #112]\t@ 0x70\n@@ -1158350,49 +1158350,49 @@\n \t...\n \tble.n\t23f9f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1bc4>\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbgt.n\t23f9a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1b70>\n \tmovs\tr6, r4\n-\tb.n\t23fa08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1bd4>\n+\tb.n\t23fa18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1be4>\n \tmovs\tr4, r3\n-\tldrb\tr6, [r2, r3]\n+\tldrb\tr6, [r3, r3]\n \tmovs\tr3, r3\n \tbls.n\t23f950 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1b1c>\n \tmovs\tr6, r4\n-\tb.n\t23f8f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1ac0>\n+\tb.n\t23f904 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1ad0>\n \tmovs\tr3, r3\n-\tb.n\t23f8dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1aa8>\n+\tb.n\t23f8ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1ab8>\n \tmovs\tr3, r3\n-\tstrh\tr6, [r6, r5]\n+\tstrh\tr6, [r7, r5]\n \tmovs\tr4, r3\n-\tstr\tr4, [r4, r7]\n+\tstr\tr4, [r5, r7]\n \tmovs\tr3, r3\n-\tb.n\t23f8a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1a74>\n+\tb.n\t23f8b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1a84>\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr2, [r7, r3]\n+\tstrh\tr2, [r0, r4]\n \tmovs\tr4, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #24]\n+\tldr\tr5, [sp, #72]\t@ 0x48\n \tmovs\tr2, r3\n-\tldr\tr5, [sp, #8]\n+\tldr\tr5, [sp, #56]\t@ 0x38\n \tmovs\tr2, r3\n-\tcbz\tr6, 23fa72 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1c3e>\n+\tcbz\tr6, 23fa74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1c40>\n \tmovs\tr4, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1158722,19 +1158722,19 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t23fbfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1dc8>\n \tb.n\t23fb1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1ce8>\n \tnop\n-\tldr\tr7, [pc, #56]\t@ (23fc98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1e64>)\n+\tldr\tr7, [pc, #88]\t@ (23fcb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1e84>)\n \tmovs\tr4, r3\n-\tldr\tr6, [pc, #1016]\t@ (24005c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2228>)\n+\tldr\tr7, [pc, #24]\t@ (23fc7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1e48>)\n \tmovs\tr3, r3\n-\tldr\tr7, [pc, #72]\t@ (23fcb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1e7c>)\n+\tldr\tr7, [pc, #104]\t@ (23fcd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1e9c>)\n \tmovs\tr4, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::calcPossibleSeqVectorClipoffs(int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_misc.C:1406\n@@ -1159509,43 +1159509,43 @@\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbcs.n\t2401c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa238c>\n \tmovs\tr6, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #288]\t@ (24035c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2528>)\n+\tldr\tr5, [pc, #320]\t@ (24037c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2548>)\n \tmovs\tr4, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #328]\t@ 0x148\n+\tstr\tr5, [sp, #376]\t@ 0x178\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldmia\tr6, {r1, r2, r3, r4, r5, r6}\n \tmovs\tr6, r4\n \tldmia\tr6, {r2, r3, r4, r6}\n \tmovs\tr6, r4\n-\tldr\tr0, [pc, #832]\t@ (2405a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2770>)\n+\tldr\tr0, [pc, #864]\t@ (2405c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2790>)\n \tmovs\tr4, r3\n-\tldr\tr0, [pc, #616]\t@ (2404d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa269c>)\n+\tldr\tr0, [pc, #648]\t@ (2404f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa26bc>)\n \tmovs\tr4, r3\n-\tldr\tr0, [pc, #584]\t@ (2404b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2680>)\n+\tldr\tr0, [pc, #616]\t@ (2404d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa26a0>)\n \tmovs\tr4, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstrh\tr2, [r7, #30]\n+\tstrh\tr2, [r0, #32]\n \tmovs\tr3, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr9, sp, #192\t@ 0xc0\n \tmov.w\tfp, #0\n \tmov\tr0, r9\n \tmov.w\tsl, #0\n \tblx\tbcc4 \n@@ -1160127,41 +1160127,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #896]\t@ 0x380\n+\tstr\tr1, [sp, #944]\t@ 0x3b0\n \tmovs\tr2, r3\n-\tstr\tr1, [sp, #880]\t@ 0x370\n+\tstr\tr1, [sp, #928]\t@ 0x3a0\n \tmovs\tr2, r3\n-\tadd\tr0, sp, #96\t@ 0x60\n+\tadd\tr0, sp, #128\t@ 0x80\n \tmovs\tr4, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #912]\t@ 0x390\n+\tstr\tr0, [sp, #960]\t@ 0x3c0\n \tmovs\tr2, r3\n-\tstr\tr0, [sp, #864]\t@ 0x360\n+\tstr\tr0, [sp, #912]\t@ 0x390\n \tmovs\tr2, r3\n-\t\t\t@ instruction: 0xb8a8\n+\t\t\t@ instruction: 0xb8b0\n \tmovs\tr4, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsls\tr0, r5, #24\n \tmovs\tr0, r0\n-\tldrh\tr6, [r2, #54]\t@ 0x36\n+\tldrh\tr2, [r4, #54]\t@ 0x36\n \tmovs\tr2, r3\n-\tldrh\tr2, [r2, #54]\t@ 0x36\n+\tldrh\tr6, [r3, #54]\t@ 0x36\n \tmovs\tr2, r3\n-\tadd\tr5, pc, #56\t@ (adr r5, 240750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa291c>)\n+\tadd\tr5, pc, #88\t@ (adr r5, 240770 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa293c>)\n \tmovs\tr4, r3\n \tldr\tr1, [sp, #28]\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr3, [sp, #24]\n /usr/include/c++/10/bits/char_traits.h:329\n \tldrb\tr2, [r1, #8]\n \tstrb.w\tr2, [ip]\n@@ -1160489,27 +1160489,27 @@\n \tblx\tb844 \n \tb.n\t24087a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2a46>\n \tb.n\t24095a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2b26>\n \tb.n\t240966 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2b32>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t2408d6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2aa2>\n \tb.n\t2408ea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2ab6>\n-\torrs\tr2, r0\n+\torrs\tr2, r1\n \tmovs\tr4, r3\n-\tcmn\tr6, r2\n+\tcmn\tr6, r3\n \tmovs\tr4, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tcmn\tr4, r2\n+\tcmn\tr4, r3\n \tmovs\tr4, r3\n-\tldrh\tr4, [r5, #40]\t@ 0x28\n+\tldrh\tr0, [r7, #40]\t@ 0x28\n \tmovs\tr2, r3\n-\tldrh\tr0, [r5, #40]\t@ 0x28\n+\tldrh\tr4, [r6, #40]\t@ 0x28\n \tmovs\tr2, r3\n-\tadd\tr3, pc, #400\t@ (adr r3, 240b2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2cf8>)\n+\tadd\tr3, pc, #432\t@ (adr r3, 240b4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa2d18>)\n \tmovs\tr4, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1161373,73 +1161373,73 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadcs\tr4, r0\n+\tadcs\tr4, r1\n \tmovs\tr4, r3\n-\tasrs\tr0, r2\n+\tasrs\tr0, r3\n \tmovs\tr4, r3\n-\tldrsb\tr6, [r7, r1]\n+\tldrsb\tr6, [r0, r2]\n \tmovs\tr5, r3\n-\tldrh\tr2, [r1, #20]\n+\tldrh\tr6, [r2, #20]\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tstmia\tr3!, {r1, r2, r4, r6, r7}\n \tmovs\tr6, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tsubs\tr7, #178\t@ 0xb2\n+\tsubs\tr7, #186\t@ 0xba\n \tmovs\tr4, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tsubs\tr7, #158\t@ 0x9e\n+\tsubs\tr7, #166\t@ 0xa6\n \tmovs\tr4, r3\n-\tstrb\tr0, [r6, r3]\n+\tstrb\tr0, [r7, r3]\n \tmovs\tr5, r3\n-\tsubs\tr7, #102\t@ 0x66\n+\tsubs\tr7, #110\t@ 0x6e\n \tmovs\tr4, r3\n-\tadds\tr5, #38\t@ 0x26\n+\tadds\tr5, #46\t@ 0x2e\n \tmovs\tr3, r3\n-\tsubs\tr7, #64\t@ 0x40\n+\tsubs\tr7, #72\t@ 0x48\n \tmovs\tr4, r3\n-\tstrb\tr4, [r1, r0]\n+\tstrb\tr4, [r2, r0]\n \tmovs\tr5, r3\n-\tsubs\tr6, #166\t@ 0xa6\n+\tsubs\tr6, #174\t@ 0xae\n \tmovs\tr4, r3\n-\tadds\tr6, #210\t@ 0xd2\n+\tadds\tr6, #218\t@ 0xda\n \tmovs\tr4, r3\n-\tadds\tr6, #228\t@ 0xe4\n+\tadds\tr6, #236\t@ 0xec\n \tmovs\tr4, r3\n-\tsubs\tr5, #12\n+\tsubs\tr5, #20\n \tmovs\tr4, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr6, [r0, #48]\t@ 0x30\n+\tstrh\tr2, [r2, #48]\t@ 0x30\n \tmovs\tr2, r3\n-\tstrh\tr2, [r0, #48]\t@ 0x30\n+\tstrh\tr6, [r1, #48]\t@ 0x30\n \tmovs\tr2, r3\n-\tldr\tr4, [sp, #248]\t@ 0xf8\n+\tldr\tr4, [sp, #280]\t@ 0x118\n \tmovs\tr4, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tsubs\tr4, #164\t@ 0xa4\n+\tsubs\tr4, #172\t@ 0xac\n \tmovs\tr4, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #168\t@ 0xa8\n \tadd\tr4, sp, #104\t@ 0x68\n \tmov\tr0, r8\n \tblx\tbcc4 \n /usr/include/c++/10/ostream:391\n@@ -1161786,31 +1161786,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r6, #26]\n+\tstrh\tr0, [r0, #28]\n \tmovs\tr2, r3\n-\tstrh\tr0, [r5, #26]\n+\tstrh\tr4, [r6, #26]\n \tmovs\tr2, r3\n-\tadd\tr3, sp, #216\t@ 0xd8\n+\tadd\tr3, sp, #248\t@ 0xf8\n \tmovs\tr4, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr0, #60\t@ 0x3c\n+\tsubs\tr0, #68\t@ 0x44\n \tmovs\tr4, r3\n-\tsubs\tr0, #120\t@ 0x78\n+\tsubs\tr0, #128\t@ 0x80\n \tmovs\tr4, r3\n-\tsubs\tr1, #94\t@ 0x5e\n+\tsubs\tr1, #102\t@ 0x66\n \tmovs\tr4, r3\n Assembly::warnChimeraContent():\n ./src/mira/assembly_misc.C:2101\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r0\n \tldr\tr4, [pc, #844]\t@ (241758 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa3924>)\n \tvpush\t{d8-d10}\n@@ -1162200,15 +1162200,15 @@\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcbnz\tr6, 2417b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa3980>\n \tmovs\tr6, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadds\tr6, #76\t@ 0x4c\n+\tadds\tr6, #84\t@ 0x54\n \tmovs\tr4, r3\n \t\t\t@ instruction: 0xb854\n \tmovs\tr6, r4\n /usr/include/c++/10/bits/basic_string.tcc:215\n \tadd\tr6, sp, #116\t@ 0x74\n /usr/include/c++/10/bits/basic_string.h:157\n \tadd.w\tfp, sp, #152\t@ 0x98\n@@ -1162594,34 +1162594,34 @@\n \tvldr\td9, [pc, #12]\t@ 241a40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa3c0c>\n \tb.n\t24160c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa37d8>\n \tasrs\tr3, r7, #17\n \t\t\t@ instruction: 0x47ae\n \tldrb\tr1, [r4, #11]\n \tsubs\tr7, #116\t@ 0x74\n \t...\n-\tadds\tr5, #166\t@ 0xa6\n+\tadds\tr5, #174\t@ 0xae\n \tmovs\tr4, r3\n-\tadds\tr5, #212\t@ 0xd4\n+\tadds\tr5, #220\t@ 0xdc\n \tmovs\tr4, r3\n-\tadds\tr5, #178\t@ 0xb2\n+\tadds\tr5, #186\t@ 0xba\n \tmovs\tr4, r3\n-\tstcl\t0, cr0, [r2], {27}\n-\tadds\tr5, #10\n+\tstcl\t0, cr0, [sl], {27}\n+\tadds\tr5, #18\n \tmovs\tr4, r3\n-\tadds\tr5, #100\t@ 0x64\n+\tadds\tr5, #108\t@ 0x6c\n \tmovs\tr4, r3\n-\tadds\tr6, #100\t@ 0x64\n+\tadds\tr6, #108\t@ 0x6c\n \tmovs\tr4, r3\n-\tadds\tr6, #220\t@ 0xdc\n+\tadds\tr6, #228\t@ 0xe4\n \tmovs\tr4, r3\n-\tadds\tr6, #170\t@ 0xaa\n+\tadds\tr6, #178\t@ 0xb2\n \tmovs\tr4, r3\n-\tadds\tr2, #106\t@ 0x6a\n+\tadds\tr2, #114\t@ 0x72\n \tmovs\tr4, r3\n-\tadds\tr2, #118\t@ 0x76\n+\tadds\tr2, #126\t@ 0x7e\n \tmovs\tr4, r3\n /usr/include/c++/10/streambuf:473\n \tldr\tr4, [pc, #680]\t@ (241d20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa3eec>)\n /usr/include/boost/format/format_implementation.hpp:30\n \tmovs\tr5, #255\t@ 0xff\n \tvldr\td2, [pc, #668]\t@ 241d18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa3ee4>\n /usr/include/c++/10/bits/basic_string.h:160\n@@ -1162982,19 +1162982,19 @@\n \tb.n\t241b6e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa3d3a>\n \tnop.w\n \t...\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr2, #226\t@ 0xe2\n+\tadds\tr2, #234\t@ 0xea\n \tmovs\tr4, r3\n-\tadds\tr0, #40\t@ 0x28\n+\tadds\tr0, #48\t@ 0x30\n \tmovs\tr4, r3\n-\tadds\tr0, #16\n+\tadds\tr0, #24\n \tmovs\tr4, r3\n /usr/include/boost/format/parsing.hpp:530\n \tadd\tr0, sp, #344\t@ 0x158\n \tcbz\tr5, 241d4a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa3f16>\n /usr/include/c++/10/bits/stl_vector.h:1046\n \tldr\tr1, [sp, #296]\t@ 0x128\n /usr/include/boost/format/parsing.hpp:530\n@@ -1163653,23 +1163653,23 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #19\n \tmovs\tr0, r0\n \tlsls\tr4, r2, #30\n \tmovs\tr0, r0\n-\tcmp\tr6, #26\n+\tcmp\tr6, #34\t@ 0x22\n \tmovs\tr4, r3\n-\tmovs\tr5, #22\n+\tmovs\tr5, #30\n \tmovs\tr4, r3\n-\tmovs\tr5, #8\n+\tmovs\tr5, #16\n \tmovs\tr4, r3\n-\tldr\tr3, [sp, #744]\t@ 0x2e8\n+\tldr\tr3, [sp, #776]\t@ 0x308\n \tmovs\tr4, r3\n-\tcmp\tr2, #194\t@ 0xc2\n+\tcmp\tr2, #202\t@ 0xca\n \tmovs\tr4, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n /usr/include/boost/format/format_implementation.hpp:56\n \tldr\tr0, [sp, #52]\t@ 0x34\n@@ -1164117,53 +1164117,53 @@\n \tadds\tr4, #92\t@ 0x5c\n \tb.n\t242466 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4632>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t2423a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4570>\n \tb.n\t2423b2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa457e>\n \tb.n\t2423a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4570>\n \tnop\n-\tcmp\tr4, #44\t@ 0x2c\n+\tcmp\tr4, #52\t@ 0x34\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tcmp\tr2, #86\t@ 0x56\n+\tcmp\tr2, #94\t@ 0x5e\n \tmovs\tr4, r3\n-\tcmp\tr2, #72\t@ 0x48\n+\tcmp\tr2, #80\t@ 0x50\n \tmovs\tr4, r3\n-\tcmp\tr2, #6\n+\tcmp\tr2, #14\n \tmovs\tr4, r3\n-\tstr\tr4, [r6, #124]\t@ 0x7c\n+\tldr\tr0, [r0, #0]\n \tmovs\tr2, r3\n-\tstrb\tr0, [r7, #8]\n+\tstrb\tr4, [r0, #9]\n \tmovs\tr2, r3\n-\tstr\tr4, [r4, #124]\t@ 0x7c\n+\tstr\tr0, [r6, #124]\t@ 0x7c\n \tmovs\tr2, r3\n-\tstr\tr0, [r3, #124]\t@ 0x7c\n+\tstr\tr4, [r4, #124]\t@ 0x7c\n \tmovs\tr2, r3\n-\tstr\tr0, [r2, #124]\t@ 0x7c\n+\tstr\tr4, [r3, #124]\t@ 0x7c\n \tmovs\tr2, r3\n-\tstr\tr0, [r1, #124]\t@ 0x7c\n+\tstr\tr4, [r2, #124]\t@ 0x7c\n \tmovs\tr2, r3\n-\tstr\tr0, [r0, #124]\t@ 0x7c\n+\tstr\tr4, [r1, #124]\t@ 0x7c\n \tmovs\tr2, r3\n-\tstr\tr0, [r7, #120]\t@ 0x78\n+\tstr\tr4, [r0, #124]\t@ 0x7c\n \tmovs\tr2, r3\n-\tstr\tr0, [r6, #120]\t@ 0x78\n+\tstr\tr4, [r7, #120]\t@ 0x78\n \tmovs\tr2, r3\n-\tbpl.n\t24265c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4828>\n+\tbpl.n\t242474 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4640>\n \tmovs\tr2, r3\n-\tbvs.n\t242584 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4750>\n+\tbvs.n\t24259c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4768>\n \tmovs\tr2, r3\n-\tbvs.n\t2425d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa47a0>\n+\tbvs.n\t2425ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa47b8>\n \tmovs\tr2, r3\n-\tbcc.n\t242560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa472c>\n+\tbmi.n\t242578 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4744>\n \tmovs\tr2, r3\n-\tbmi.n\t242568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4734>\n+\tbpl.n\t242580 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa474c>\n \tmovs\tr2, r3\n-\tbpl.n\t2425b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa4784>\n+\tbpl.n\t2425d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa479c>\n \tmovs\tr2, r3\n \tlsls\tr0, r4, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #11\n \tmovs\tr0, r0\n Assembly::analyseTemplateGuesses():\n ./src/mira/assembly_misc.C:1941\n@@ -1165410,63 +1165410,63 @@\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr0, #206\t@ 0xce\n+\tcmp\tr0, #214\t@ 0xd6\n \tmovs\tr4, r3\n-\tcmp\tr0, #170\t@ 0xaa\n+\tcmp\tr0, #178\t@ 0xb2\n \tmovs\tr4, r3\n-\tcmp\tr0, #176\t@ 0xb0\n+\tcmp\tr0, #184\t@ 0xb8\n \tmovs\tr4, r3\n-\tcmp\tr0, #182\t@ 0xb6\n+\tcmp\tr0, #190\t@ 0xbe\n \tmovs\tr4, r3\n-\tcmp\tr3, #72\t@ 0x48\n+\tcmp\tr3, #80\t@ 0x50\n \tmovs\tr5, r3\n-\tcmp\tr0, #66\t@ 0x42\n+\tcmp\tr0, #74\t@ 0x4a\n \tmovs\tr4, r3\n-\tcmp\tr0, #50\t@ 0x32\n+\tcmp\tr0, #58\t@ 0x3a\n \tmovs\tr4, r3\n-\tcmp\tr0, #34\t@ 0x22\n+\tcmp\tr0, #42\t@ 0x2a\n \tmovs\tr4, r3\n-\tcmp\tr0, #18\n+\tcmp\tr0, #26\n \tmovs\tr4, r3\n-\tcmp\tr0, #4\n+\tcmp\tr0, #12\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tmovs\tr7, #22\n+\tmovs\tr7, #30\n \tmovs\tr4, r3\n-\tmovs\tr6, #212\t@ 0xd4\n+\tmovs\tr6, #220\t@ 0xdc\n \tmovs\tr4, r3\n-\tmovs\tr4, #48\t@ 0x30\n+\tmovs\tr4, #56\t@ 0x38\n \tmovs\tr4, r3\n-\tmovs\tr4, #34\t@ 0x22\n+\tmovs\tr4, #42\t@ 0x2a\n \tmovs\tr4, r3\n-\tmovs\tr6, #244\t@ 0xf4\n+\tmovs\tr6, #252\t@ 0xfc\n \tmovs\tr5, r3\n-\tmovs\tr3, #240\t@ 0xf0\n+\tmovs\tr3, #248\t@ 0xf8\n \tmovs\tr4, r3\n-\tmovs\tr3, #226\t@ 0xe2\n+\tmovs\tr3, #234\t@ 0xea\n \tmovs\tr4, r3\n-\tmovs\tr3, #212\t@ 0xd4\n+\tmovs\tr3, #220\t@ 0xdc\n \tmovs\tr4, r3\n-\tmovs\tr3, #198\t@ 0xc6\n+\tmovs\tr3, #206\t@ 0xce\n \tmovs\tr4, r3\n-\tmovs\tr3, #186\t@ 0xba\n+\tmovs\tr3, #194\t@ 0xc2\n \tmovs\tr4, r3\n-\tmovs\tr3, #116\t@ 0x74\n+\tmovs\tr3, #124\t@ 0x7c\n \tmovs\tr4, r3\n \tadd\tr1, pc, #464\t@ (adr r1, 243264 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa5430>)\n \tmovs\tr6, r4\n-\tmovs\tr2, #44\t@ 0x2c\n+\tmovs\tr2, #52\t@ 0x34\n \tmovs\tr4, r3\n /usr/include/c++/10/bits/stl_vector.h:919\n \tldr\tr7, [sp, #16]\n \tldr\tr0, [r7, #4]\n \tldr\tr3, [r7, #0]\n \tsubs\tr2, r0, r3\n /usr/include/c++/10/bits/stl_vector.h:939\n@@ -1166586,29 +1166586,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrsh\tr0, [r0, r0]\n+\tldrsh\tr4, [r1, r0]\n \tmovs\tr2, r3\n-\tldrb\tr4, [r6, r7]\n+\tldrsh\tr0, [r0, r0]\n \tmovs\tr2, r3\n-\tstrh\tr2, [r0, #46]\t@ 0x2e\n+\tstrh\tr2, [r1, #46]\t@ 0x2e\n \tmovs\tr4, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsh\tr0, [r1, r6]\n+\tldrsh\tr0, [r2, r6]\n \tmovs\tr3, r3\n-\tadds\tr6, r1, r1\n+\tadds\tr6, r2, r1\n \tmovs\tr4, r3\n \tlsrs\tr0, r5, #2\n \tmovs\tr0, r0\n Assembly::extendADS(int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_misc.C:1556\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n@@ -1167089,29 +1167089,29 @@\n \teors\tr1, r3\n \tstr\tr5, [sp, #48]\t@ 0x30\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [sp, #856]\t@ 0x358\n \tmovs\tr6, r4\n-\tstr\tr0, [r5, #108]\t@ 0x6c\n+\tstr\tr0, [r6, #108]\t@ 0x6c\n \tmovs\tr5, r3\n-\tadd\tr2, pc, #992\t@ (adr r2, 2441dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa63a8>)\n+\tadd\tr3, pc, #0\t@ (adr r3, 243dfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa5fc8>)\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr0, [pc, #872]\t@ (24416c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6338>)\n+\tldr\tr0, [pc, #904]\t@ (24418c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6358>)\n \tmovs\tr3, r3\n-\tasrs\tr0, r6, #14\n+\tasrs\tr0, r7, #14\n \tmovs\tr4, r3\n-\tstmia\tr7!, {r1, r3, r4, r5, r6}\n+\tstmia\tr7!, {r1, r7}\n \tmovs\tr3, r3\n-\tldrb\tr0, [r5, #9]\n+\tldrb\tr0, [r6, #9]\n \tmovs\tr4, r3\n-\tcbz\tr2, 243e38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6004>\n+\tcbz\tr6, 243e3a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6006>\n \tmovs\tr2, r3\n \tvmov\tr1, s21\n \tmov\tr0, r8\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n \tcmp\tr7, r4\n \tbeq.n\t243e5e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa602a>\n@@ -1168470,69 +1168470,69 @@\n \tnop\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #128]\t@ 0x80\n+\tldr\tr1, [sp, #160]\t@ 0xa0\n \tmovs\tr3, r3\n-\tadcs\tr2, r0\n+\tadcs\tr2, r1\n \tmovs\tr3, r3\n \tasrs\tr0, r5, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr6, r5, #16\n+\tlsrs\tr6, r6, #16\n \tmovs\tr4, r3\n-\tlsrs\tr0, r5, #16\n+\tlsrs\tr0, r6, #16\n \tmovs\tr4, r3\n-\tadd\tr1, sp, #672\t@ 0x2a0\n+\tadd\tr1, sp, #720\t@ 0x2d0\n \tmovs\tr2, r3\n-\tldrh\tr4, [r7, r6]\n+\tldrh\tr4, [r0, r7]\n \tmovs\tr5, r3\n-\tstr\tr7, [sp, #816]\t@ 0x330\n+\tstr\tr7, [sp, #848]\t@ 0x350\n \tmovs\tr3, r3\n-\tbkpt\t0x004e\n+\tbkpt\t0x0056\n \tmovs\tr3, r3\n-\tstrb\tr4, [r7, #4]\n+\tstrb\tr4, [r0, #5]\n \tmovs\tr4, r3\n-\tadd\tr0, sp, #776\t@ 0x308\n+\tadd\tr0, sp, #824\t@ 0x338\n \tmovs\tr2, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #240]\t@ (244a64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6c30>)\n+\tldr\tr5, [pc, #288]\t@ (244a94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6c60>)\n \tmovs\tr2, r3\n-\tldr\tr5, [pc, #216]\t@ (244a50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6c1c>)\n+\tldr\tr5, [pc, #264]\t@ (244a80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6c4c>)\n \tmovs\tr2, r3\n-\tstr\tr2, [r6, #52]\t@ 0x34\n+\tstr\tr2, [r7, #52]\t@ 0x34\n \tmovs\tr4, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #824]\t@ (244cc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6e90>)\n+\tldr\tr4, [pc, #872]\t@ (244cf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6ec0>)\n \tmovs\tr2, r3\n-\tldr\tr4, [pc, #776]\t@ (244c98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6e64>)\n+\tldr\tr4, [pc, #824]\t@ (244cc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6e94>)\n \tmovs\tr2, r3\n-\tstrb\tr0, [r2, #18]\n+\tstrb\tr0, [r3, #18]\n \tmovs\tr4, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #360\t@ (adr r6, 244b04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6cd0>)\n+\tadd\tr6, pc, #408\t@ (adr r6, 244b34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa6d00>)\n \tmovs\tr2, r3\n ./src/mira/../../src/mira/skim.H:213\n \tldr\tr4, [sp, #60]\t@ 0x3c\n \tmov\tr0, r4\n \tbl\t23b3d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x9d59c>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #3084]\t@ 2455b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7780>\n@@ -1170088,17 +1170088,17 @@\n /usr/include/c++/10/sstream:584\n \tmov\tr0, r7\n \tb.n\t245580 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa774c>\n /usr/include/c++/10/bits/basic_ios.h:282\n \tb.n\t245592 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa775e>\n \tb.n\t245474 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7640>\n \tnop\n-\tb.n\t244f70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa713c>\n+\tb.n\t244f80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa714c>\n \tmovs\tr2, r3\n-\tb.n\t244f58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7124>\n+\tb.n\t244f68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7134>\n \tmovs\tr2, r3\n \tlsls\tr0, r6, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1170108,35 +1170108,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #984]\t@ (2459b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7b84>)\n+\tldr\tr2, [pc, #8]\t@ (2455e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa77b4>)\n \tmovs\tr2, r3\n-\tldr\tr1, [pc, #952]\t@ (24599c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7b68>)\n+\tldr\tr1, [pc, #1000]\t@ (2459cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7b98>)\n \tmovs\tr2, r3\n-\tstr\tr0, [r5, #0]\n+\tstr\tr0, [r6, #0]\n \tmovs\tr4, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr0, [pc, #816]\t@ (245920 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7aec>)\n+\tldr\tr0, [pc, #864]\t@ (245950 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7b1c>)\n \tmovs\tr2, r3\n-\tldr\tr0, [pc, #752]\t@ (2458e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7ab0>)\n+\tldr\tr0, [pc, #800]\t@ (245914 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7ae0>)\n \tmovs\tr2, r3\n-\tstrb\tr2, [r1, #2]\n+\tstrb\tr2, [r2, #2]\n \tmovs\tr4, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsls\tr4, r0, #18\n+\tlsls\tr4, r1, #18\n \tmovs\tr4, r3\n-\tstr\tr2, [sp, #432]\t@ 0x1b0\n+\tstr\tr2, [sp, #480]\t@ 0x1e0\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n@@ -1170144,19 +1170144,19 @@\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr0, r5, #6\n+\tlsls\tr0, r6, #6\n \tmovs\tr4, r3\n-\tadds\tr4, r6, r4\n+\tadds\tr0, r0, r5\n \tmovs\tr2, r3\n-\tldc2l\t0, cr0, [r8], {27}\n+\tstc2l\t0, cr0, [r0], #108\t@ 0x6c\n Assembly__sortTemplateGuessInfo_(Contig::templateguessinfo_t const&, Contig::templateguessinfo_t const&):\n ./src/mira/../../src/mira/readgrouplib.H:65\n \tldrb\tr3, [r0, #5]\n \tldrb\tr2, [r1, #5]\n ./src/mira/assembly_misc.C:1923\n \tcmp\tr2, r3\n \tbeq.n\t245640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa780c>\n@@ -1171797,75 +1171797,75 @@\n \tb.n\t245b94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa7d60>\n \tldrb\tr6, [r4, #3]\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr4, [r0, #3]\n \tmovs\tr6, r4\n-\tstrh\tr0, [r5, #46]\t@ 0x2e\n+\tstrh\tr0, [r6, #46]\t@ 0x2e\n \tmovs\tr3, r3\n-\tstrh\tr4, [r1, #46]\t@ 0x2e\n+\tstrh\tr4, [r2, #46]\t@ 0x2e\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstc\t0, cr0, [sl, #-108]\t@ 0xffffff94\n-\tvst1.8\t\t\t@ instruction: 0xf986001b\n-\tvst4.8\t{d0-d3}, [lr :64], fp\n-\t\t\t@ instruction: 0xebe8001b\n-\tstr??.w\tr0, [r6, #27]\n-\tstr\tr2, [sp, #296]\t@ 0x128\n+\tldc\t0, cr0, [r2, #-108]\t@ 0xffffff94\n+\tvst1.8\t\t\t@ instruction: 0xf98e001b\n+\tldrsb.w\tr0, [r6, fp, lsl #1]\n+\t\t\t@ instruction: 0xebf0001b\n+\tstr??.w\tr0, [lr, #27]\n+\tstr\tr2, [sp, #328]\t@ 0x148\n \tmovs\tr3, r3\n-\tsubs\tr3, #40\t@ 0x28\n+\tsubs\tr3, #52\t@ 0x34\n \tmovs\tr2, r3\n-\tldr.w\tr0, [sl, #27]\n-\tldrh.w\tr0, [r6, #27]\n-\tstrh\tr4, [r6, #14]\n+\tstr??.w\tr0, [r2, #27]\n+\tldrh.w\tr0, [lr, #27]\n+\tstrh\tr4, [r7, #14]\n \tmovs\tr3, r3\n-\tstrh\tr4, [r4, #14]\n+\tstrh\tr4, [r5, #14]\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xf7bc001b\n-\tstr\tr0, [sp, #336]\t@ 0x150\n+\t\t\t@ instruction: 0xf7c4001b\n+\tstr\tr0, [sp, #368]\t@ 0x170\n \tmovs\tr3, r3\n \tlsrs\tr0, r5, #19\n \tmovs\tr0, r0\n \tlsls\tr0, r6, #30\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\teors.w\tr0, lr, #10158080\t@ 0x9b0000\n-\tsub.w\tr0, r8, #10158080\t@ 0x9b0000\n-\tsub.w\tr0, r6, #10158080\t@ 0x9b0000\n+\t\t\t@ instruction: 0xf4a6001b\n+\tsubs.w\tr0, r0, #10158080\t@ 0x9b0000\n+\tsub.w\tr0, lr, #10158080\t@ 0x9b0000\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n \tldr\tr4, [r5, #120]\t@ 0x78\n \tmovs\tr6, r4\n-\t\t\t@ instruction: 0xf358001b\n-\tssat16\tr0, #28, ip\n-\tssat16\tr0, #28, ip\n-\tldrh\tr6, [r0, #34]\t@ 0x22\n+\tbfi\tr0, r0, #0, #28\n+\t\t\t@ instruction: 0xf334001b\n+\t\t\t@ instruction: 0xf334001b\n+\tldrh\tr6, [r1, #34]\t@ 0x22\n \tmovs\tr3, r3\n-\tadds\tr5, #38\t@ 0x26\n+\tadds\tr5, #50\t@ 0x32\n \tmovs\tr2, r3\n-\t\t\t@ instruction: 0xf2de001b\n+\t\t\t@ instruction: 0xf2e6001b\n ./src/mira/assembly_misc.C:152\n \tmov\tr1, r6\n \tadd\tr6, sp, #276\t@ 0x114\n \tmovs\tr2, #16\n \tmov\tr0, r6\n \tbl\t23f154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1320>\n /usr/include/c++/10/fstream:863\n@@ -1172956,42 +1172956,42 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tldrb\tr2, [r6, #7]\n+\tldrb\tr2, [r7, #7]\n \tmovs\tr3, r3\n-\tldrb\tr4, [r4, #7]\n+\tldrb\tr4, [r5, #7]\n \tmovs\tr3, r3\n-\tldrb\tr4, [r2, #7]\n+\tldrb\tr4, [r3, #7]\n \tmovs\tr3, r3\n-\tb.n\t246434 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa8600>\n+\tb.n\t246444 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa8610>\n \tmovs\tr2, r3\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n-\tb.n\t246f0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa90d8>\n+\tb.n\t246f1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa90e8>\n \tmovs\tr3, r3\n \tlsrs\tr4, r5, #11\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmcr\t0, 0, r0, cr0, cr11, {0}\n-\tpush\t{r1, r2, r4, r5, r6}\n+\tmcr\t0, 0, r0, cr8, cr11, {0}\n+\tpush\t{r1, r7}\n \tmovs\tr2, r3\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n-\tsvc\t64\t@ 0x40\n+\tsvc\t72\t@ 0x48\n \tmovs\tr3, r3\n-\tstrh\tr6, [r2, #40]\t@ 0x28\n+\tstrh\tr6, [r3, #40]\t@ 0x28\n \tmovs\tr3, r3\n-\tcmp\tr5, #248\t@ 0xf8\n+\tcmp\tr6, #4\n \tmovs\tr2, r3\n void Assembly::priv_phahelper >(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, unsigned int, bool, int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_misc.C:78\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr.w\tr2, [pc, #3132]\t@ 247818 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa99e4>\n \tvpush\t{d8-d9}\n@@ -1174598,63 +1174598,63 @@\n \tb.n\t24710a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa92d6>\n \tstr\tr6, [r6, #52]\t@ 0x34\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r2, #52]\t@ 0x34\n \tmovs\tr6, r4\n-\tstrb\tr0, [r7, #1]\n+\tstrb\tr0, [r0, #2]\n \tmovs\tr3, r3\n-\tstrb\tr2, [r1, #1]\n+\tstrb\tr2, [r2, #1]\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbvc.n\t247760 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa992c>\n+\tbvc.n\t247770 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa993c>\n \tmovs\tr3, r3\n-\tb.n\t247058 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9224>\n+\tb.n\t247068 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9234>\n \tmovs\tr3, r3\n-\tb.n\t247f6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa138>\n+\tb.n\t247f7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa148>\n \tmovs\tr3, r3\n-\tbvs.n\t247924 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9af0>\n+\tbvs.n\t247934 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9b00>\n \tmovs\tr3, r3\n-\tb.n\t247f24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa0f0>\n+\tb.n\t247f34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa100>\n \tmovs\tr3, r3\n-\tldrb\tr4, [r2, #19]\n+\tldrb\tr4, [r3, #19]\n \tmovs\tr3, r3\n-\tmovs\tr5, #178\t@ 0xb2\n+\tmovs\tr5, #190\t@ 0xbe\n \tmovs\tr2, r3\n-\tb.n\t247f18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa0e4>\n+\tb.n\t247f28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa0f4>\n \tmovs\tr3, r3\n-\tb.n\t247ed4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa0a0>\n+\tb.n\t247ee4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa0b0>\n \tmovs\tr3, r3\n-\tldr\tr6, [r7, #68]\t@ 0x44\n+\tldr\tr6, [r0, #72]\t@ 0x48\n \tmovs\tr3, r3\n-\tldr\tr6, [r5, #68]\t@ 0x44\n+\tldr\tr6, [r6, #68]\t@ 0x44\n \tmovs\tr3, r3\n-\tb.n\t247cf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9ebc>\n+\tb.n\t247d00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9ecc>\n \tmovs\tr3, r3\n-\tldrb\tr0, [r4, #11]\n+\tldrb\tr0, [r5, #11]\n \tmovs\tr3, r3\n \tlsrs\tr0, r5, #19\n \tmovs\tr0, r0\n \tlsls\tr0, r6, #30\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tsvc\t42\t@ 0x2a\n+\tsvc\t50\t@ 0x32\n \tmovs\tr3, r3\n-\tb.n\t2478ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9ab8>\n+\tb.n\t2478fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9ac8>\n \tmovs\tr3, r3\n-\tb.n\t2478ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9ab8>\n+\tb.n\t2478fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9ac8>\n \tmovs\tr3, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1174662,25 +1174662,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n \tldrh\tr4, [r6, r0]\n \tmovs\tr6, r4\n-\tble.n\t247868 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9a34>\n+\tble.n\t247878 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9a44>\n \tmovs\tr3, r3\n-\tble.n\t247814 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa99e0>\n+\tble.n\t247824 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa99f0>\n \tmovs\tr3, r3\n-\tble.n\t247818 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa99e4>\n+\tble.n\t247828 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa99f4>\n \tmovs\tr3, r3\n-\tstrb\tr6, [r1, #27]\n+\tstrb\tr6, [r2, #27]\n \tmovs\tr3, r3\n-\tsubs\tr6, r5, #6\n+\tsubs\tr2, r7, #6\n \tmovs\tr2, r3\n-\tble.n\t247988 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9b54>\n+\tble.n\t247998 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa9b64>\n \tmovs\tr3, r3\n ./src/mira/assembly_misc.C:152\n \tmov\tr1, r6\n \tadd\tr6, sp, #276\t@ 0x114\n \tmovs\tr2, #16\n \tmov\tr0, r6\n \tbl\t23f154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1320>\n@@ -1175771,43 +1175771,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n-\tstr\tr2, [r7, #68]\t@ 0x44\n+\tstr\tr2, [r0, #72]\t@ 0x48\n \tmovs\tr3, r3\n-\tstr\tr4, [r5, #68]\t@ 0x44\n+\tstr\tr4, [r6, #68]\t@ 0x44\n \tmovs\tr3, r3\n-\tstr\tr4, [r3, #68]\t@ 0x44\n+\tstr\tr4, [r4, #68]\t@ 0x44\n \tmovs\tr3, r3\n-\tldmia\tr6, {r1, r2, r3, r6, r7}\n+\tldmia\tr6, {r1, r2, r4, r6, r7}\n \tmovs\tr2, r3\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n-\tldmia\tr4, {r2, r4, r5}\n+\tldmia\tr4, {r2, r3, r4, r5}\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #10\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbhi.n\t248048 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa214>\n+\tbhi.n\t248058 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaa224>\n \tmovs\tr3, r3\n-\tldr\tr6, [sp, #1008]\t@ 0x3f0\n+\tldr\tr7, [sp, #32]\n \tmovs\tr2, r3\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n-\tldmia\tr1, {r1, r2, r6, r7}\n+\tldmia\tr1, {r1, r2, r3, r6, r7}\n \tmovs\tr3, r3\n-\tldr\tr4, [r3, #120]\t@ 0x78\n+\tldr\tr4, [r4, #120]\t@ 0x78\n \tmovs\tr3, r3\n-\tadds\tr6, r7, r1\n+\tadds\tr2, r1, r2\n \tmovs\tr2, r3\n void Assembly::priv_phahelper >(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, unsigned int, bool, int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_misc.C:78\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr.w\tr2, [pc, #3128]\t@ 248d90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xaaf5c>\n \tvpush\t{d8-d9}\n@@ -1177418,61 +1177418,61 @@\n \tnop\n \tldr\tr5, [pc, #1000]\t@ (24917c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xab348>)\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr5, [pc, #864]\t@ (2490fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xab2c8>)\n \tmovs\tr6, r4\n-\tsubs\tr2, r2, #3\n+\tsubs\tr2, r3, #3\n \tmovs\tr5, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr2!, {r1, r3, r5}\n+\tstmia\tr2!, {r1, r4, r5}\n \tmovs\tr3, r3\n-\tldmia\tr6!, {r2, r5, r7}\n+\tldmia\tr6!, {r2, r3, r5, r7}\n \tmovs\tr3, r3\n-\tldmia\tr6!, {r2, r3, r5}\n+\tldmia\tr6!, {r2, r4, r5}\n \tmovs\tr3, r3\n-\tstmia\tr1!, {r1, r2}\n+\tstmia\tr1!, {r1, r2, r3}\n \tmovs\tr3, r3\n-\tldmia\tr6!, {r2}\n+\tldmia\tr6!, {r2, r3}\n \tmovs\tr3, r3\n-\tstr\tr0, [r5, #116]\t@ 0x74\n+\tstr\tr0, [r6, #116]\t@ 0x74\n \tmovs\tr3, r3\n-\tasrs\tr6, r0, #1\n+\tasrs\tr2, r2, #1\n \tmovs\tr2, r3\n-\tldmia\tr5, {r3, r4, r5, r6, r7}\n+\tldmia\tr6!, {}\n \tmovs\tr3, r3\n-\tldmia\tr5!, {r2, r4, r6, r7}\n+\tldmia\tr5!, {r2, r3, r4, r6, r7}\n \tmovs\tr3, r3\n-\tldrsb\tr2, [r2, r4]\n+\tldrsb\tr2, [r3, r4]\n \tmovs\tr3, r3\n-\tldrsb\tr2, [r0, r4]\n+\tldrsb\tr2, [r1, r4]\n \tmovs\tr3, r3\n-\tldmia\tr4, {r2, r3, r4, r6, r7}\n+\tldmia\tr4!, {r2, r5, r6, r7}\n \tmovs\tr3, r3\n-\tstr\tr4, [r6, #84]\t@ 0x54\n+\tstr\tr4, [r7, #84]\t@ 0x54\n \tmovs\tr3, r3\n \tlsrs\tr0, r5, #19\n \tmovs\tr0, r0\n \tlsls\tr0, r6, #30\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tldmia\tr1!, {r4, r5, r7}\n+\tldmia\tr1!, {r3, r4, r5, r7}\n \tmovs\tr3, r3\n-\tldmia\tr2!, {r1, r3, r4, r5, r7}\n+\tldmia\tr2!, {r1, r6, r7}\n \tmovs\tr3, r3\n-\tldmia\tr2!, {r3, r4, r5, r7}\n+\tldmia\tr2!, {r6, r7}\n \tmovs\tr3, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1177480,25 +1177480,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n \tadd\tlr, r7\n \tmovs\tr6, r4\n-\tldmia\tr0!, {r1, r3, r5, r6}\n+\tldmia\tr0!, {r1, r4, r5, r6}\n \tmovs\tr3, r3\n-\tldmia\tr0!, {r1, r2, r3, r4, r5}\n+\tldmia\tr0!, {r1, r2, r6}\n \tmovs\tr3, r3\n-\tldmia\tr0!, {r1, r2, r3, r4, r5}\n+\tldmia\tr0!, {r1, r2, r6}\n \tmovs\tr3, r3\n-\tstr\tr0, [r3, #20]\n+\tstr\tr0, [r4, #20]\n \tmovs\tr3, r3\n-\tlsrs\tr0, r7, #8\n+\tlsrs\tr4, r0, #9\n \tmovs\tr2, r3\n-\tstmia\tr7!, {r4, r5, r6, r7}\n+\tstmia\tr7!, {r3, r4, r5, r6, r7}\n \tmovs\tr3, r3\n ./src/mira/assembly_misc.C:152\n \tmov\tr1, r6\n \tadd\tr6, sp, #276\t@ 0x114\n \tmovs\tr2, #16\n \tmov\tr0, r6\n \tbl\t23f154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1320>\n@@ -1178589,43 +1178589,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n-\tldr\tr7, [pc, #24]\t@ (2496a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xab870>)\n+\tldr\tr7, [pc, #56]\t@ (2496c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xab890>)\n \tmovs\tr3, r3\n-\tldr\tr6, [pc, #992]\t@ (249a70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xabc3c>)\n+\tldr\tr7, [pc, #0]\t@ (249690 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xab85c>)\n \tmovs\tr3, r3\n-\tldr\tr6, [pc, #928]\t@ (249a34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xabc00>)\n+\tldr\tr6, [pc, #960]\t@ (249a54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xabc20>)\n \tmovs\tr3, r3\n-\tcbnz\tr2, 2496ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xab87a>\n+\tcbnz\tr2, 2496b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xab87c>\n \tmovs\tr2, r3\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb6c0\n+\t\t\t@ instruction: 0xb6c8\n \tmovs\tr3, r3\n \tlsrs\tr4, r2, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r4}\n+\tstmia\tr3!, {r1, r3, r4}\n \tmovs\tr3, r3\n-\tldrh\tr0, [r1, #12]\n+\tldrh\tr4, [r2, #12]\n \tmovs\tr2, r3\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n-\tpush\t{r1, r4, r6}\n+\tpush\t{r1, r3, r4, r6}\n \tmovs\tr3, r3\n-\tldrh\tr0, [r5, r0]\n+\tldrh\tr0, [r6, r0]\n \tmovs\tr3, r3\n-\tlsls\tr2, r1, #12\n+\tlsls\tr6, r2, #12\n \tmovs\tr2, r3\n void Assembly::priv_phahelper(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, unsigned int, bool, int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_misc.C:78\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr.w\tr2, [pc, #3152]\t@ 24a31c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xac4e8>\n \tvpush\t{d8-d9}\n@@ -1180244,62 +1180244,62 @@\n \tnop\n \tsubs\tr0, #134\t@ 0x86\n \tmovs\tr6, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr0, #100\t@ 0x64\n \tmovs\tr6, r4\n-\tcmp\tsl, r0\n+\tcmp\tsl, r1\n \tmovs\tr3, r3\n-\tcmp\tr0, r8\n+\tcmp\tr0, r9\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #648\t@ 0x288\n+\tadd\tr4, sp, #680\t@ 0x2a8\n \tmovs\tr3, r3\n-\tcbnz\tr4, 24a342 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xac50e>\n+\tcbnz\tr4, 24a344 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xac510>\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xb8a4\n+\t\t\t@ instruction: 0xb8ac\n \tmovs\tr3, r3\n-\tadd\tr3, sp, #504\t@ 0x1f8\n+\tadd\tr3, sp, #536\t@ 0x218\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xb87c\n+\t\t\t@ instruction: 0xb884\n \tmovs\tr3, r3\n-\tstr\tr0, [r4, r7]\n+\tstr\tr0, [r5, r7]\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xfabe0019\n-\t\t\t@ instruction: 0xb870\n+\t\t\t@ instruction: 0xfaca0019\n+\t\t\t@ instruction: 0xb878\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xb84c\n+\t\t\t@ instruction: 0xb854\n \tmovs\tr3, r3\n-\tsbcs\tr2, r1\n+\tsbcs\tr2, r2\n \tmovs\tr3, r3\n-\tadcs\tr2, r7\n+\tsbcs\tr2, r0\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xb754\n+\t\t\t@ instruction: 0xb75c\n \tmovs\tr3, r3\n-\tldr\tr7, [pc, #944]\t@ (24a718 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xac8e4>)\n+\tldr\tr7, [pc, #976]\t@ (24a738 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xac904>)\n \tmovs\tr3, r3\n \tlsrs\tr0, r5, #19\n \tmovs\tr0, r0\n \tlsls\tr0, r6, #30\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tpush\t{r3, r5}\n+\tpush\t{r4, r5}\n \tmovs\tr3, r3\n-\tpush\t{r1, r4, r5, lr}\n+\tpush\t{r1, r3, r4, r5, lr}\n \tmovs\tr3, r3\n-\tpush\t{r4, r5, lr}\n+\tpush\t{r3, r4, r5, lr}\n \tmovs\tr3, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1180307,24 +1180307,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n \tcmp\tr7, #50\t@ 0x32\n \tmovs\tr6, r4\n-\tuxtb\tr6, r3\n+\tuxtb\tr6, r4\n \tmovs\tr3, r3\n-\tuxth\tr2, r6\n+\tuxth\tr2, r7\n \tmovs\tr3, r3\n-\tuxth\tr2, r6\n+\tuxth\tr2, r7\n \tmovs\tr3, r3\n-\tldr\tr3, [pc, #816]\t@ (24a6e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xac8b4>)\n+\tldr\tr3, [pc, #848]\t@ (24a708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xac8d4>)\n \tmovs\tr3, r3\n-\t\t\t@ instruction: 0xf4ac0019\n-\tsxtb\tr4, r4\n+\t\t\t@ instruction: 0xf4b80019\n+\tsxtb\tr4, r5\n \tmovs\tr3, r3\n ./src/mira/assembly_misc.C:152\n \tmov\tr1, r6\n \tadd\tr6, sp, #276\t@ 0x114\n \tmovs\tr2, #16\n \tmov\tr0, r6\n \tbl\t23f154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xa1320>\n@@ -1181421,43 +1181421,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n-\tsubs\tr1, #118\t@ 0x76\n+\tsubs\tr1, #126\t@ 0x7e\n \tmovs\tr3, r3\n-\tsubs\tr1, #104\t@ 0x68\n+\tsubs\tr1, #112\t@ 0x70\n \tmovs\tr3, r3\n-\tsubs\tr1, #88\t@ 0x58\n+\tsubs\tr1, #96\t@ 0x60\n \tmovs\tr3, r3\n-\tadd\tr3, pc, #808\t@ (adr r3, 24af50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad11c>)\n+\tadd\tr3, pc, #840\t@ (adr r3, 24af70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad13c>)\n \tmovs\tr2, r3\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #192\t@ (adr r1, 24acf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xacebc>)\n+\tadd\tr1, pc, #224\t@ (adr r1, 24ad10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xacedc>)\n \tmovs\tr3, r3\n \tlsrs\tr0, r3, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #520\t@ 0x208\n+\tadd\tr5, sp, #552\t@ 0x228\n \tmovs\tr3, r3\n-\tstrb\tr0, [r7, #15]\n+\tstrb\tr4, [r0, #16]\n \tmovs\tr2, r3\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #776]\t@ 0x308\n+\tldr\tr6, [sp, #808]\t@ 0x328\n \tmovs\tr3, r3\n-\tadd\tr8, r3\n+\tadd\tr8, r4\n \tmovs\tr3, r3\n-\tldcl\t0, cr0, [sl, #-100]!\t@ 0xffffff9c\n+\tstc\t0, cr0, [r6, #100]\t@ 0x64\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tvpush\t{d8}\n \tsub\tsp, #36\t@ 0x24\n@@ -1181896,15 +1181896,15 @@\n \tnop\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xffffffff\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (24b008 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad1d4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tb.n\t24aaa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xacc74>\n+\tb.n\t24aac0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xacc8c>\n \tmovs\tr1, r3\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t24b136 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad302>\n@@ -1182359,15 +1182359,15 @@\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #16]\t@ (24b3d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad5a4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n \t\t\t@ instruction: 0xffffffff\n \t\t\t@ instruction: 0xffffffff\n-\tb.n\t24b6ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad8b8>\n+\tb.n\t24b704 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad8d0>\n \tmovs\tr1, r3\n void std::__insertion_sort<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Iter_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1839\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tsl, r1\n \tldr\tr1, [pc, #172]\t@ (24b490 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad65c>)\n \tldr\tr3, [pc, #172]\t@ (24b494 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xad660>)\n@@ -1183321,19 +1183321,19 @@\n \tmovs\tr2, #135\t@ 0x87\n \tldr\tr1, [pc, #16]\t@ (24ba80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xadc4c>)\n \tldr\tr0, [pc, #16]\t@ (24ba84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xadc50>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tsubs\tr4, #26\n+\tsubs\tr4, #38\t@ 0x26\n \tmovs\tr2, r3\n-\tldr\tr4, [r0, r0]\n+\tldr\tr0, [r2, r0]\n \tmovs\tr2, r3\n-\tsubs\tr4, #178\t@ 0xb2\n+\tsubs\tr4, #190\t@ 0xbe\n \tmovs\tr2, r3\n void std::__adjust_heap<__gnu_cxx::__normal_iterator > >, int, Contig::templateguessinfo_t, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, int, int, Contig::templateguessinfo_t, __gnu_cxx::__ops::_Iter_comp_iter):\n /usr/include/c++/10/bits/stl_heap.h:223\n \tsub\tsp, #8\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:228\n \tadd.w\tr9, r2, #4294967295\t@ 0xffffffff\n@@ -1184682,15 +1184682,15 @@\n \tstmia.w\tsl, {r0, r1, r2}\n \tb.n\t24c2b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xae484>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (24c460 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xae62c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr7, pc, #816\t@ (adr r7, 24c794 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xae960>)\n+\tadd\tr7, pc, #864\t@ (adr r7, 24c7c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xae990>)\n \tmovs\tr1, r3\n void std::__push_heap<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse > >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tsub\tsp, #8\n /usr/include/c++/10/bits/stl_heap.h:139\n \tcmp\tr1, r2\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -1207842,41 +1207842,41 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tldr\tr5, [pc, #816]\t@ (258708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba8d4>)\n \tmovs\tr5, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbcs.n\t258368 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba534>\n+\tbcs.n\t258378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba544>\n \tmovs\tr2, r3\n \tldr\tr5, [pc, #696]\t@ (25869c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba868>)\n \tmovs\tr5, r4\n-\tsubs\tr2, #104\t@ 0x68\n+\tsubs\tr2, #112\t@ 0x70\n \tmovs\tr3, r3\n-\trev16\tr4, r3\n+\trev16\tr4, r4\n \tmovs\tr4, r3\n-\tbcs.n\t258334 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba500>\n+\tbcs.n\t258344 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba510>\n \tmovs\tr2, r3\n-\tbcs.n\t25832c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba4f8>\n+\tbcs.n\t25833c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba508>\n \tmovs\tr2, r3\n-\trev\tr0, r6\n+\trev\tr0, r7\n \tmovs\tr4, r3\n \tldr\tr4, [pc, #160]\t@ (25849c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba668>)\n \tmovs\tr5, r4\n-\tasrs\tr6, r0, #24\n+\tasrs\tr6, r1, #24\n \tmovs\tr2, r3\n-\tbne.n\t25841c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba5e8>\n+\tbne.n\t25842c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba5f8>\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbeq.n\t2583dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba5a8>\n+\tbeq.n\t2583ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba5b8>\n \tmovs\tr2, r3\n-\tlsrs\tr0, r2, #26\n+\tlsrs\tr0, r3, #26\n \tmovs\tr2, r3\n-\tlsrs\tr6, r4, #26\n+\tlsrs\tr6, r5, #26\n \tmovs\tr2, r3\n \tbge.n\t2584ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xba678>\n \tmovs\tr0, r3\n assout::dumpSequenceAsGBF_priv(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::list > const&, std::ostream&):\n ./src/mira/assembly_output.C:2782\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n@@ -1208993,78 +1208993,78 @@\n \tb.n\t258bc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbad8c>\n \tldr\tr3, [pc, #232]\t@ (258d08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbaed4>)\n \tmovs\tr5, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [pc, #120]\t@ (258ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbae6c>)\n \tmovs\tr5, r4\n-\tldmia\tr7!, {r6}\n+\tldmia\tr7!, {r3, r6}\n \tmovs\tr2, r3\n-\tmovs\tr3, #64\t@ 0x40\n+\tmovs\tr3, #72\t@ 0x48\n \tmovs\tr4, r3\n-\tldmia\tr7!, {r1}\n+\tldmia\tr7!, {r1, r3}\n \tmovs\tr2, r3\n-\tldmia\tr6, {r3, r4, r5, r6, r7}\n+\tldmia\tr7!, {}\n \tmovs\tr2, r3\n-\tmovs\tr2, r0\n+\tmovs\tr2, r1\n+\tmovs\tr2, r3\n+\tldmia\tr6, {r5, r6, r7}\n \tmovs\tr2, r3\n-\tldmia\tr6, {r3, r4, r6, r7}\n+\tldmia\tr6, {r1, r5, r6, r7}\n \tmovs\tr2, r3\n \tldmia\tr6, {r1, r3, r4, r6, r7}\n \tmovs\tr2, r3\n \tldmia\tr6, {r1, r4, r6, r7}\n \tmovs\tr2, r3\n-\tldmia\tr6, {r1, r3, r6, r7}\n-\tmovs\tr2, r3\n-\tldmia\tr7!, {r5}\n+\tldmia\tr7!, {r3, r5}\n \tmovs\tr2, r3\n-\tasrs\tr0, r4, #11\n+\tasrs\tr0, r5, #11\n \tmovs\tr2, r3\n-\tsubs\tr5, #30\n+\tsubs\tr5, #38\t@ 0x26\n \tmovs\tr4, r3\n-\tldmia\tr7!, {r2, r4, r6}\n+\tldmia\tr7!, {r2, r3, r4, r6}\n \tmovs\tr2, r3\n \tlsrs\tr0, r6, #8\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n-\tlsls\tr0, r5, #29\n+\tlsls\tr0, r6, #29\n \tmovs\tr3, r3\n-\tmcr2\t0, 3, r0, cr6, cr9, {0}\n-\tldmia\tr5!, {r3, r6}\n+\tmcr2\t0, 3, r0, cr14, cr9, {0}\n+\tldmia\tr5!, {r4, r6}\n \tmovs\tr2, r3\n-\tstc2\t0, cr0, [lr, #100]\t@ 0x64\n-\tcbz\tr6, 258ce0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbaeac>\n+\tldc2\t0, cr0, [r6, #100]\t@ 0x64\n+\tcbz\tr6, 258ce2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbaeae>\n \tmovs\tr4, r3\n-\tldc2\t0, cr0, [ip, #-100]\t@ 0xffffff9c\n-\tmovs\tr3, #54\t@ 0x36\n+\tstc2\t0, cr0, [r4, #-100]!\t@ 0xffffff9c\n+\tmovs\tr3, #62\t@ 0x3e\n \tmovs\tr2, r3\n \tmov\tr4, ip\n \tmovs\tr5, r4\n-\tldmia\tr4!, {r3}\n+\tldmia\tr4, {r4}\n \tmovs\tr2, r3\n-\tlsls\tr0, r5, #20\n+\tlsls\tr0, r6, #20\n \tmovs\tr3, r3\n-\tbvs.n\t258c90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbae5c>\n+\tbvs.n\t258ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbae6c>\n \tmovs\tr1, r3\n-\tldmia\tr3, {r1, r3, r6, r7}\n+\tldmia\tr3!, {r1, r4, r6, r7}\n \tmovs\tr2, r3\n-\tldmia\tr3, {r1, r2, r3, r4, r7}\n+\tldmia\tr3!, {r1, r2, r5, r7}\n \tmovs\tr2, r3\n-\tldmia\tr3!, {r1, r2, r4, r5, r6}\n+\tldmia\tr3, {r1, r2, r3, r4, r5, r6}\n \tmovs\tr2, r3\n-\tldmia\tr3, {r1, r3, r6}\n+\tldmia\tr3!, {r1, r4, r6}\n \tmovs\tr2, r3\n-\tldmia\tr3!, {r1, r5}\n+\tldmia\tr3, {r1, r3, r5}\n \tmovs\tr2, r3\n-\tldmia\tr2!, {r3, r4, r5, r6, r7}\n+\tldmia\tr3!, {}\n \tmovs\tr2, r3\n \tmvns\tr4, r4\n \tmovs\tr5, r4\n-\tb.n\t258dc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbaf94>\n+\tb.n\t258de0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbafac>\n \tmovs\tr0, r3\n assout::dumpContigs(std::__cxx11::list >&, std::ostream&):\n ./src/mira/assembly_output.C:3030\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n ./src/mira/assembly_output.C:3043\n \tldr\tr2, [pc, #232]\t@ (258da0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbaf6c>)\n@@ -1209194,21 +1209194,21 @@\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tb.n\t258d00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbaecc>\n \tmov\tr0, sl\n \tbl\t3e4670 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x220d8>\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tstrb\tr0, [r1, r5]\n+\tstrb\tr4, [r2, r5]\n \tmovs\tr1, r3\n-\tldmia\tr1!, {r2, r6}\n+\tldmia\tr1!, {r2, r3, r6}\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldmia\tr1!, {r4, r6}\n+\tldmia\tr1!, {r3, r4, r6}\n \tmovs\tr2, r3\n \tcmp\tr6, r1\n \tmovs\tr5, r4\n \tcmp\tr2, r0\n \tmovs\tr5, r4\n \tnegs\tr2, r0\n \tmovs\tr5, r4\n@@ -1209345,19 +1209345,19 @@\n \tmov\tr0, r8\n \tblx\tr2\n \tmov\tr1, r0\n \tb.n\t258e4e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb01a>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n-\tldmia\tr0!, {r4, r7}\n+\tldmia\tr0!, {r3, r4, r7}\n \tmovs\tr2, r3\n \tsbcs\tr4, r0\n \tmovs\tr5, r4\n-\tadd\tr6, sp, #328\t@ 0x148\n+\tadd\tr6, sp, #360\t@ 0x168\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n assout::dumpHTMLHeader(std::__cxx11::basic_string, std::allocator > const&, std::ostream&):\n ./src/mira/assembly_output.C:3396\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r1\n@@ -1209518,67 +1209518,67 @@\n \tbne.w\t258ee2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb0ae>\n ./src/mira/assembly_output.C:3441\n \tldr\tr1, [pc, #112]\t@ (25909c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb268>)\n \tmov\tr0, r4\n \tadd\tr1, pc\n \tbl\t257a78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xb9c44>\n \tb.n\t258eea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb0b6>\n-\tstmia\tr7!, {r2, r4, r7}\n+\tstmia\tr7!, {r2, r3, r4, r7}\n \tmovs\tr2, r3\n-\tldmia\tr0!, {r3, r4, r7}\n+\tldmia\tr0!, {r5, r7}\n \tmovs\tr2, r3\n-\tldmia\tr0!, {r3, r4, r6, r7}\n+\tldmia\tr0!, {r5, r6, r7}\n \tmovs\tr2, r3\n-\tldmia\tr0!, {r1, r2, r3, r6, r7}\n+\tldmia\tr0!, {r1, r2, r4, r6, r7}\n \tmovs\tr2, r3\n-\tbeq.n\t258fcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb198>\n+\tbeq.n\t258fdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1a8>\n \tmovs\tr2, r3\n-\tbeq.n\t259008 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1d4>\n+\tbeq.n\t259018 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1e4>\n \tmovs\tr2, r3\n-\tbeq.n\t25900c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1d8>\n+\tbeq.n\t25901c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1e8>\n \tmovs\tr2, r3\n-\tbne.n\t259058 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb224>\n+\tbne.n\t259068 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb234>\n \tmovs\tr2, r3\n-\tbne.n\t259134 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb300>\n+\tbne.n\t259144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb310>\n \tmovs\tr2, r3\n-\tbne.n\t258fe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1ac>\n+\tbne.n\t258ff0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1bc>\n \tmovs\tr2, r3\n-\tbcs.n\t25908c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb258>\n+\tbcs.n\t25909c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb268>\n \tmovs\tr2, r3\n-\tbcs.n\t259140 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb30c>\n+\tbcs.n\t259150 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb31c>\n \tmovs\tr2, r3\n-\tbcs.n\t25904c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb218>\n+\tbcs.n\t25905c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb228>\n \tmovs\tr2, r3\n-\tbcc.n\t259138 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb304>\n+\tbcc.n\t259148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb314>\n \tmovs\tr2, r3\n-\tbcc.n\t259024 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1f0>\n+\tbcc.n\t259034 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb200>\n \tmovs\tr2, r3\n-\tbmi.n\t259128 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb2f4>\n+\tbmi.n\t259138 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb304>\n \tmovs\tr2, r3\n-\tbmi.n\t25902c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1f8>\n+\tbmi.n\t25903c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb208>\n \tmovs\tr2, r3\n-\tbpl.n\t259148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb314>\n+\tbpl.n\t259158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb324>\n \tmovs\tr2, r3\n-\tbpl.n\t259044 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb210>\n+\tbpl.n\t259054 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb220>\n \tmovs\tr2, r3\n-\tbvs.n\t259100 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb2cc>\n+\tbvs.n\t259110 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb2dc>\n \tmovs\tr2, r3\n-\tbvs.n\t258fdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1a8>\n+\tbvs.n\t258fec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb1b8>\n \tmovs\tr2, r3\n-\tbvc.n\t2590b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb284>\n+\tbvc.n\t2590c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb294>\n \tmovs\tr2, r3\n-\tbvc.n\t258f94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb160>\n+\tbvc.n\t258fa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb170>\n \tmovs\tr2, r3\n-\tbvc.n\t259080 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb24c>\n+\tbvc.n\t259090 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb25c>\n \tmovs\tr2, r3\n-\tstmia\tr7!, {r1, r5, r6}\n+\tstmia\tr7!, {r1, r3, r5, r6}\n \tmovs\tr2, r3\n-\tstmia\tr7!, {r2, r3, r4, r6}\n+\tstmia\tr7!, {r2, r5, r6}\n \tmovs\tr2, r3\n-\tstmia\tr7!, {r2, r4, r6}\n+\tstmia\tr7!, {r2, r3, r4, r6}\n \tmovs\tr2, r3\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n@@ -1210098,31 +1210098,31 @@\n \tnop\n \tsubs\tr5, #210\t@ 0xd2\n \tmovs\tr5, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr5, #182\t@ 0xb6\n \tmovs\tr5, r4\n-\tbvs.n\t2594dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb6a8>\n+\tbvs.n\t2594ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb6b8>\n \tmovs\tr2, r3\n \tsubs\tr5, #110\t@ 0x6e\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tbpl.n\t259480 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb64c>\n+\tbpl.n\t259490 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb65c>\n \tmovs\tr2, r3\n-\tbpl.n\t259534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb700>\n+\tbpl.n\t259544 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb710>\n \tmovs\tr2, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbmi.n\t259468 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb634>\n+\tbmi.n\t259478 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb644>\n \tmovs\tr2, r3\n-\tbmi.n\t259464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb630>\n+\tbmi.n\t259474 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb640>\n \tmovs\tr2, r3\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const [clone .constprop.0]:\n ./src/mira/../../src/mira/stringcontainer.H:114\n \tldr\tr1, [pc, #260]\t@ (2595b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb780>)\n \tldr\tr2, [pc, #264]\t@ (2595b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb784>)\n \tadd\tr1, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -1210267,17 +1210267,17 @@\n \tmovs\tr0, r0\n \tsubs\tr2, #164\t@ 0xa4\n \tmovs\tr5, r4\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tsubs\tr2, #122\t@ 0x7a\n \tmovs\tr5, r4\n-\tbvs.n\t259588 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb754>\n+\tbvs.n\t2595a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb76c>\n \tmovs\tr0, r3\n-\tbvs.n\t259588 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb754>\n+\tbvs.n\t2595a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb76c>\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1210428,17 +1210428,17 @@\n \tmovs\tr0, r0\n \tsubs\tr1, #116\t@ 0x74\n \tmovs\tr5, r4\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tsubs\tr1, #74\t@ 0x4a\n \tmovs\tr5, r4\n-\tbpl.n\t259658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb824>\n+\tbpl.n\t259670 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb83c>\n \tmovs\tr0, r3\n-\tbpl.n\t259658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb824>\n+\tbpl.n\t259670 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbb83c>\n \tmovs\tr0, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1210829,36 +1210829,36 @@\n \tb.n\t2599b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbb80>\n \tsubs\tr0, #68\t@ 0x44\n \tmovs\tr5, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr0, #56\t@ 0x38\n \tmovs\tr5, r4\n-\tstrb\tr0, [r5, #20]\n+\tstrb\tr0, [r6, #20]\n \tmovs\tr2, r3\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tpop\t{r3, r5, r6, r7, pc}\n+\tpop\t{r4, r5, r6, r7, pc}\n \tmovs\tr2, r3\n-\tldr\tr1, [pc, #904]\t@ (259d94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbf60>)\n+\tldr\tr1, [pc, #952]\t@ (259dc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbf90>)\n \tmovs\tr1, r3\n-\tbne.n\t259968 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbb34>\n+\tbne.n\t259978 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbb44>\n \tmovs\tr2, r3\n \tadds\tr6, #226\t@ 0xe2\n \tmovs\tr5, r4\n-\t\t\t@ instruction: 0xf2600018\n-\tbeq.n\t2599c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbb90>\n+\t\t\t@ instruction: 0xf26c0018\n+\tbeq.n\t2599d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbba0>\n \tmovs\tr2, r3\n-\tbeq.n\t2599f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbbc0>\n+\tbeq.n\t259a04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbbd0>\n \tmovs\tr2, r3\n-\tbeq.n\t2599d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbba4>\n+\tbeq.n\t2599e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbbbb4>\n \tmovs\tr2, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n@@ -1211345,37 +1211345,37 @@\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr4, #112\t@ 0x70\n \tmovs\tr5, r4\n \tadds\tr4, #106\t@ 0x6a\n \tmovs\tr5, r4\n-\t\t\t@ instruction: 0xf0a60018\n-\torrs.w\tr0, r4, #24\n+\t\t\t@ instruction: 0xf0b20018\n+\torn\tr0, r0, #24\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tadds\tr2, #116\t@ 0x74\n \tmovs\tr5, r4\n+\tmcr\t0, 0, r0, cr4, cr8, {0}\n \tldcl\t0, cr0, [r8, #96]!\t@ 0x60\n-\tstcl\t0, cr0, [ip, #96]!\t@ 0x60\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb864\n+\t\t\t@ instruction: 0xb86c\n \tmovs\tr2, r3\n-\tadd\tr0, r8\n+\tadd\tr4, r9\n \tmovs\tr1, r3\n-\tldmia\tr4!, {r1, r2, r3, r6}\n+\tldmia\tr4, {r1, r2, r4, r6}\n \tmovs\tr2, r3\n assout::saveAsFASTA(std::__cxx11::list >&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:2485\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r3\n \tldr\tr3, [pc, #784]\t@ (25a150 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbc31c>)\n \tvpush\t{d8}\n@@ -1211810,26 +1211810,26 @@\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr1, #10\n \tmovs\tr5, r4\n \tadds\tr0, #248\t@ 0xf8\n \tmovs\tr5, r4\n-\tstcl\t0, cr0, [r2, #-96]\t@ 0xffffffa0\n-\tldcl\t0, cr0, [r0], #96\t@ 0x60\n-\t\t\t@ instruction: 0xb67c\n+\tstcl\t0, cr0, [lr, #-96]\t@ 0xffffffa0\n+\tldcl\t0, cr0, [ip], #96\t@ 0x60\n+\t\t\t@ instruction: 0xb684\n \tmovs\tr2, r3\n-\tnegs\tr6, r6\n+\tcmp\tr2, r0\n \tmovs\tr1, r3\n-\tldmia\tr2!, {r4, r5, r6, r7}\n+\tldmia\tr2!, {r3, r4, r5, r6, r7}\n \tmovs\tr2, r3\n \tcmp\tr7, #18\n \tmovs\tr5, r4\n-\teors.w\tr0, r6, r8, lsr #32\n-\teor.w\tr0, lr, r8, lsr #32\n+\t\t\t@ instruction: 0xeaa20018\n+\teors.w\tr0, sl, r8, lsr #32\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n assout::saveCoverageInfo(std::__cxx11::list >&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:643\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr5, [pc, #3248]\t@ 25ae38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd004>\n@@ -1213514,17 +1213514,17 @@\n \tmovs\tr5, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr5, #186\t@ 0xba\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr1, {r1, r2, r4, r5}\n+\tldmia\tr1, {r1, r2, r3, r4, r5}\n \tmovs\tr2, r3\n-\tldmia\tr1, {r1, r2, r5}\n+\tldmia\tr1, {r1, r2, r3, r5}\n \tmovs\tr2, r3\n \tstrh\tr0, [r6, #6]\n \tmovs\tr6, r4\n \tstrh\tr6, [r0, #6]\n \tmovs\tr6, r4\n \tstrh\tr6, [r4, #4]\n \tmovs\tr6, r4\n@@ -1213544,71 +1213544,71 @@\n \tmovs\tr6, r4\n \tldrb\tr4, [r7, #30]\n \tmovs\tr6, r4\n \tldrb\tr6, [r7, #29]\n \tmovs\tr6, r4\n \tldrb\tr2, [r7, #29]\n \tmovs\tr6, r4\n-\tsubs\tr1, #184\t@ 0xb8\n+\tsubs\tr1, #192\t@ 0xc0\n \tmovs\tr2, r3\n \tasrs\tr4, r3, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #22\n \tmovs\tr0, r0\n-\tsubs\tr1, #120\t@ 0x78\n+\tsubs\tr1, #128\t@ 0x80\n \tmovs\tr2, r3\n-\tsubs\tr1, #68\t@ 0x44\n+\tsubs\tr1, #76\t@ 0x4c\n \tmovs\tr2, r3\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tsubs\tr0, #228\t@ 0xe4\n+\tsubs\tr0, #236\t@ 0xec\n \tmovs\tr2, r3\n-\tsubs\tr0, #204\t@ 0xcc\n+\tsubs\tr0, #212\t@ 0xd4\n \tmovs\tr2, r3\n-\tsubs\tr0, #180\t@ 0xb4\n+\tsubs\tr0, #188\t@ 0xbc\n \tmovs\tr2, r3\n-\tsubs\tr0, #156\t@ 0x9c\n+\tsubs\tr0, #164\t@ 0xa4\n \tmovs\tr2, r3\n-\tsubs\tr0, #132\t@ 0x84\n+\tsubs\tr0, #140\t@ 0x8c\n \tmovs\tr2, r3\n-\tsubs\tr0, #108\t@ 0x6c\n+\tsubs\tr0, #116\t@ 0x74\n \tmovs\tr2, r3\n-\tsubs\tr0, #84\t@ 0x54\n+\tsubs\tr0, #92\t@ 0x5c\n \tmovs\tr2, r3\n-\tsubs\tr0, #60\t@ 0x3c\n+\tsubs\tr0, #68\t@ 0x44\n \tmovs\tr2, r3\n-\tsubs\tr0, #2\n+\tsubs\tr0, #10\n \tmovs\tr2, r3\n-\tadds\tr7, #198\t@ 0xc6\n+\tadds\tr7, #206\t@ 0xce\n \tmovs\tr2, r3\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tldrb\tr2, [r4, #18]\n \tmovs\tr6, r4\n-\tadds\tr7, #72\t@ 0x48\n+\tadds\tr7, #80\t@ 0x50\n \tmovs\tr2, r3\n \tldrb\tr2, [r5, #16]\n \tmovs\tr6, r4\n-\tadds\tr6, #208\t@ 0xd0\n+\tadds\tr6, #216\t@ 0xd8\n \tmovs\tr2, r3\n \tldrb\tr2, [r6, #14]\n \tmovs\tr6, r4\n-\tadds\tr6, #88\t@ 0x58\n+\tadds\tr6, #96\t@ 0x60\n \tmovs\tr2, r3\n \tldrb\tr2, [r7, #12]\n \tmovs\tr6, r4\n-\tadds\tr5, #224\t@ 0xe0\n+\tadds\tr5, #232\t@ 0xe8\n \tmovs\tr2, r3\n \tldrb\tr2, [r0, #11]\n \tmovs\tr6, r4\n-\tadds\tr5, #108\t@ 0x6c\n+\tadds\tr5, #116\t@ 0x74\n \tmovs\tr2, r3\n-\tadds\tr5, #46\t@ 0x2e\n+\tadds\tr5, #54\t@ 0x36\n \tmovs\tr2, r3\n-\tble.n\t25af28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd0f4>\n+\tble.n\t25af38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd104>\n \tmovs\tr1, r3\n \tmovs\tr4, #250\t@ 0xfa\n \tmovs\tr5, r4\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tadds\tr4, #60\t@ 0x3c\n \tmovs\tr5, r4\n@@ -1213620,17 +1213620,17 @@\n \tmovs\tr5, r4\n \tadds\tr3, #82\t@ 0x52\n \tmovs\tr5, r4\n \tadds\tr3, #16\n \tmovs\tr5, r4\n \tadds\tr2, #206\t@ 0xce\n \tmovs\tr5, r4\n-\titee\tpl\n+\titte\tpl\n \tmovpl\tr2, r3\n-\tstrbmi\tr0, [r2, #22]\n+\tstrbpl\tr0, [r2, #22]\n \tmovmi\tr6, r4\n \tadds\tr2, #146\t@ 0x92\n \tmovs\tr5, r4\n \tadds\tr2, #80\t@ 0x50\n \tmovs\tr5, r4\n \tadds\tr2, #14\n \tmovs\tr5, r4\n@@ -1214812,99 +1214812,99 @@\n \tb.n\t25b6be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd88a>\n ./src/mira/assembly_output.C:680\n \tldr\tr0, [pc, #212]\t@ (25b938 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdb04>)\n \tadd\tr0, pc\n \tadds\tr0, #28\n \tblx\tb430 <__cxa_guard_abort@plt>\n \tb.n\t25b6be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbd88a>\n-\tpop\t{r1, r2, r4, r5, r6, r7}\n+\tpop\t{r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr2, r3\n \tstrb\tr0, [r7, #12]\n \tmovs\tr6, r4\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tadds\tr0, #56\t@ 0x38\n \tmovs\tr5, r4\n-\tpop\t{r1, r2, r3, r7}\n+\tpop\t{r1, r2, r4, r7}\n \tmovs\tr2, r3\n \tstrb\tr0, [r1, #12]\n \tmovs\tr6, r4\n \tadds\tr0, #4\n \tmovs\tr5, r4\n-\tpop\t{r1, r2, r5, r6}\n+\tpop\t{r1, r2, r3, r5, r6}\n \tmovs\tr2, r3\n \tstrb\tr0, [r2, #11]\n \tmovs\tr6, r4\n \tcmp\tr7, #208\t@ 0xd0\n \tmovs\tr5, r4\n-\tpop\t{r1, r6}\n+\tpop\t{r1, r3, r6}\n \tmovs\tr2, r3\n \tstrb\tr0, [r4, #10]\n \tmovs\tr6, r4\n \tcmp\tr7, #158\t@ 0x9e\n \tmovs\tr5, r4\n-\tpop\t{r1, r3, r4}\n+\tpop\t{r1, r5}\n \tmovs\tr2, r3\n \tstrb\tr4, [r5, #9]\n \tmovs\tr6, r4\n \tcmp\tr7, #104\t@ 0x68\n \tmovs\tr5, r4\n-\tcbnz\tr0, 25b91a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdae6>\n+\tcbnz\tr0, 25b91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdae8>\n \tmovs\tr2, r3\n \tstrb\tr2, [r7, #8]\n \tmovs\tr6, r4\n \tcmp\tr7, #58\t@ 0x3a\n \tmovs\tr5, r4\n-\tcbnz\tr4, 25b91a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdae6>\n+\tcbnz\tr4, 25b91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdae8>\n \tmovs\tr2, r3\n \tstrb\tr6, [r0, #8]\n \tmovs\tr6, r4\n \tcmp\tr7, #4\n \tmovs\tr5, r4\n-\tcbnz\tr2, 25b91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdae8>\n+\tcbnz\tr2, 25b91e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdaea>\n \tmovs\tr2, r3\n \tstrb\tr4, [r2, #7]\n \tmovs\tr6, r4\n \tcmp\tr6, #210\t@ 0xd2\n \tmovs\tr5, r4\n-\thlt\t0x0022\n+\thlt\t0x002e\n \tmovs\tr0, r3\n-\thlt\t0x001e\n+\thlt\t0x002a\n \tmovs\tr0, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\trev\tr2, r1\n+\trev\tr6, r2\n \tmovs\tr0, r3\n-\trev\tr6, r0\n+\trev\tr2, r2\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tcbnz\tr6, 25b90e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdada>\n-\tmovs\tr0, r3\n \tcbnz\tr2, 25b912 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdade>\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb8d6\n+\tcbnz\tr6, 25b914 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdae0>\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb8d2\n+\t\t\t@ instruction: 0xb8e2\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb83a\n+\t\t\t@ instruction: 0xb8de\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb836\n+\t\t\t@ instruction: 0xb846\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb7a2\n+\t\t\t@ instruction: 0xb842\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb79e\n+\t\t\t@ instruction: 0xb7ae\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb704\n+\t\t\t@ instruction: 0xb7aa\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xb700\n+\t\t\t@ instruction: 0xb710\n+\tmovs\tr0, r3\n+\t\t\t@ instruction: 0xb70c\n \tmovs\tr0, r3\n \tldr\tr6, [r6, #64]\t@ 0x40\n \tmovs\tr6, r4\n \tldr\tr4, [r3, #48]\t@ 0x30\n \tmovs\tr6, r4\n \tldr\tr0, [r2, #44]\t@ 0x2c\n \tmovs\tr6, r4\n@@ -1215227,19 +1215227,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tasrs\tr6, r5, #19\n \tmovs\tr5, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcbz\tr4, 25bbb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdd7c>\n+\tcbz\tr4, 25bbb2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdd7e>\n \tmovs\tr2, r3\n-\tcbz\tr0, 25bbb2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdd7e>\n+\tcbz\tr0, 25bbb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdd80>\n \tmovs\tr2, r3\n-\tcbz\tr6, 25bbb6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdd82>\n+\tcbz\tr6, 25bbb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdd84>\n \tmovs\tr2, r3\n assout::saveAsWiggle(std::__cxx11::list >&, std::__cxx11::basic_string, std::allocator > const&, bool, bool):\n ./src/mira/assembly_output.C:3321\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r3\n \tldr\tr3, [pc, #380]\t@ (25bd10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdedc>)\n \tsub\tsp, #300\t@ 0x12c\n@@ -1215451,21 +1215451,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tmovs\tr6, #14\n+\tmovs\tr6, #26\n \tmovs\tr1, r3\n-\tldr\tr1, [sp, #952]\t@ 0x3b8\n+\tldr\tr1, [sp, #984]\t@ 0x3d8\n \tmovs\tr2, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tcbz\tr0, 25bd3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdf08>\n+\tcbz\tr0, 25bd3e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbdf0a>\n \tmovs\tr2, r3\n \tasrs\tr0, r4, #11\n \tmovs\tr5, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n assout::saveAs_TYPE(std::__cxx11::list >&, std::__cxx11::basic_string, std::allocator > const&, unsigned char, bool):\n ./src/mira/assembly_output.C:3060\n@@ -1215889,19 +1215889,19 @@\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr6, r1, #1\n \tmovs\tr5, r4\n \tasrs\tr2, r1, #1\n \tmovs\tr5, r4\n-\tadd\tr6, sp, #264\t@ 0x108\n+\tadd\tr6, sp, #296\t@ 0x128\n \tmovs\tr2, r3\n-\tstr\tr6, [sp, #768]\t@ 0x300\n+\tstr\tr6, [sp, #800]\t@ 0x320\n \tmovs\tr2, r3\n-\tmovs\tr2, #188\t@ 0xbc\n+\tmovs\tr2, #200\t@ 0xc8\n \tmovs\tr1, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n@@ -1216119,19 +1216119,19 @@\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr2, r3, #26\n \tmovs\tr5, r4\n \tlsrs\tr6, r2, #26\n \tmovs\tr5, r4\n-\tadd\tr4, sp, #984\t@ 0x3d8\n+\tadd\tr4, sp, #1016\t@ 0x3f8\n \tmovs\tr2, r3\n-\tstr\tr5, [sp, #48]\t@ 0x30\n+\tstr\tr5, [sp, #80]\t@ 0x50\n \tmovs\tr2, r3\n-\tmovs\tr1, #8\n+\tmovs\tr1, #20\n \tmovs\tr1, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n@@ -1216349,19 +1216349,19 @@\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr6, r4, #19\n \tmovs\tr5, r4\n \tlsrs\tr2, r4, #19\n \tmovs\tr5, r4\n-\tadd\tr3, sp, #584\t@ 0x248\n+\tadd\tr3, sp, #616\t@ 0x268\n \tmovs\tr2, r3\n-\tstr\tr3, [sp, #352]\t@ 0x160\n+\tstr\tr3, [sp, #384]\t@ 0x180\n \tmovs\tr2, r3\n-\tsubs\tr4, r2, #5\n+\tsubs\tr0, r4, #5\n \tmovs\tr1, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n@@ -1216579,19 +1216579,19 @@\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr2, r6, #12\n \tmovs\tr5, r4\n \tlsrs\tr6, r5, #12\n \tmovs\tr5, r4\n-\tadd\tr2, sp, #264\t@ 0x108\n+\tadd\tr2, sp, #296\t@ 0x128\n \tmovs\tr2, r3\n-\tstr\tr1, [sp, #656]\t@ 0x290\n+\tstr\tr1, [sp, #688]\t@ 0x2b0\n \tmovs\tr2, r3\n-\tadds\tr0, r4, #6\n+\tadds\tr4, r5, #6\n \tmovs\tr1, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n@@ -1216776,19 +1216776,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr6, r5, #3\n \tmovs\tr5, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr0, [r1, #58]\t@ 0x3a\n+\tldrh\tr0, [r2, #58]\t@ 0x3a\n \tmovs\tr2, r3\n-\tadd\tr0, sp, #200\t@ 0xc8\n+\tadd\tr0, sp, #232\t@ 0xe8\n \tmovs\tr2, r3\n-\tadd\tr0, sp, #208\t@ 0xd0\n+\tadd\tr0, sp, #240\t@ 0xf0\n \tmovs\tr2, r3\n assout::saveAs_TYPE(Contig&, std::__cxx11::basic_string, std::allocator > const&, unsigned char, bool):\n ./src/mira/assembly_output.C:3083\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr6, r2\n \tldr\tr2, [pc, #492]\t@ (25c930 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbeafc>)\n \tmov\tr9, r3\n@@ -1217046,19 +1217046,19 @@\n \tmovs\tr0, r0\n \tlsls\tr4, r7, #29\n \tmovs\tr5, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr0, [r6, #40]\t@ 0x28\n+\tldrh\tr0, [r7, #40]\t@ 0x28\n \tmovs\tr2, r3\n-\tadds\tr0, r2, r4\n+\tadds\tr4, r3, r4\n \tmovs\tr1, r3\n-\tadd\tr6, pc, #568\t@ (adr r6, 25cba0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbed6c>)\n+\tadd\tr6, pc, #600\t@ (adr r6, 25cbc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbed8c>)\n \tmovs\tr2, r3\n assout::saveConsensusTagList(Contig&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:315\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r1\n \tldr\tr3, [pc, #296]\t@ (25ca98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbec64>)\n \tsub\tsp, #344\t@ 0x158\n@@ -1217230,19 +1217230,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsls\tr0, r4, #21\n \tmovs\tr5, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr0, [r0, #30]\n+\tldrh\tr0, [r1, #30]\n \tmovs\tr2, r3\n-\tasrs\tr0, r4, #30\n+\tasrs\tr4, r5, #30\n \tmovs\tr1, r3\n-\tadd\tr5, pc, #440\t@ (adr r5, 25cc84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbee50>)\n+\tadd\tr5, pc, #472\t@ (adr r5, 25cca4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbee70>)\n \tmovs\tr2, r3\n assout::saveReadTagList(Contig&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:257\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r1\n \tldr\tr3, [pc, #296]\t@ (25cbfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbedc8>)\n \tsub\tsp, #344\t@ 0x158\n@@ -1217414,19 +1217414,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsls\tr4, r7, #15\n \tmovs\tr5, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr4, [r3, #18]\n+\tldrh\tr4, [r4, #18]\n \tmovs\tr2, r3\n-\tasrs\tr4, r7, #24\n+\tasrs\tr0, r1, #25\n \tmovs\tr1, r3\n-\tadd\tr4, pc, #312\t@ (adr r4, 25cd68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbef34>)\n+\tadd\tr4, pc, #344\t@ (adr r4, 25cd88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbef54>)\n \tmovs\tr2, r3\n assout::saveStatistics(Contig&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:158\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r1\n \tldr\tr3, [pc, #296]\t@ (25cd60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbef2c>)\n \tsub\tsp, #344\t@ 0x158\n@@ -1217598,19 +1217598,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsls\tr0, r3, #10\n \tmovs\tr5, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr0, [r7, #6]\n+\tldrh\tr0, [r0, #8]\n \tmovs\tr2, r3\n-\tasrs\tr0, r3, #19\n+\tasrs\tr4, r4, #19\n \tmovs\tr1, r3\n-\tadd\tr3, pc, #184\t@ (adr r3, 25ce4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf018>)\n+\tadd\tr3, pc, #216\t@ (adr r3, 25ce6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf038>)\n \tmovs\tr2, r3\n assout::saveAsGAP4DA(Contig&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:3290\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tmov\tr6, r1\n ./src/mira/assembly_output.C:3293\n@@ -1217989,47 +1217989,47 @@\n \tnop\n \tlsls\tr4, r7, #6\n \tmovs\tr5, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr2, r6, #6\n \tmovs\tr5, r4\n-\tsubs\tr6, #162\t@ 0xa2\n+\tsubs\tr6, #170\t@ 0xaa\n \tmovs\tr2, r3\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr6, r5, #1\n \tmovs\tr5, r4\n-\tcbnz\tr4, 25d10e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf2da>\n+\tcbnz\tr0, 25d112 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf2de>\n \tmovs\tr0, r3\n-\tldr\tr2, [sp, #376]\t@ 0x178\n+\tldr\tr2, [sp, #408]\t@ 0x198\n \tmovs\tr2, r3\n-\tldr\tr2, [sp, #464]\t@ 0x1d0\n+\tldr\tr2, [sp, #496]\t@ 0x1f0\n \tmovs\tr2, r3\n-\tadd\tr1, pc, #224\t@ (adr r1, 25d180 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf34c>)\n+\tadd\tr1, pc, #256\t@ (adr r1, 25d1a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf36c>)\n \tmovs\tr2, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrh\tr4, [r7, #48]\t@ 0x30\n+\tstrh\tr4, [r0, #50]\t@ 0x32\n \tmovs\tr2, r3\n-\tasrs\tr0, r4, #8\n+\tasrs\tr4, r5, #8\n \tmovs\tr1, r3\n-\tadd\tr0, pc, #728\t@ (adr r0, 25d390 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf55c>)\n+\tadd\tr0, pc, #760\t@ (adr r0, 25d3b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf57c>)\n \tmovs\tr2, r3\n assout::saveLargeContigsInfo(AssemblyInfo&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:205\n \tldr\tr2, [pc, #308]\t@ (25d1f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf3bc>)\n \tldr\tr3, [pc, #312]\t@ (25d1f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xbf3c0>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -1220316,86 +1220316,86 @@\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tldrh.w\tr0, [sl, #36]\t@ 0x24\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #56]\t@ 0x38\n+\tldr\tr2, [sp, #88]\t@ 0x58\n \tmovs\tr2, r3\n-\tldr\tr2, [sp, #80]\t@ 0x50\n+\tldr\tr2, [sp, #112]\t@ 0x70\n \tmovs\tr2, r3\n-\tldr\tr2, [sp, #80]\t@ 0x50\n+\tldr\tr2, [sp, #112]\t@ 0x70\n \tmovs\tr2, r3\n-\tadd\tr3, pc, #696\t@ (adr r3, 25e524 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc06f0>)\n+\tadd\tr3, pc, #728\t@ (adr r3, 25e544 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc0710>)\n \tmovs\tr1, r3\n-\tldr\tr1, [sp, #192]\t@ 0xc0\n+\tldr\tr1, [sp, #224]\t@ 0xe0\n \tmovs\tr2, r3\n-\tadd\tr2, pc, #632\t@ (adr r2, 25e4ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc06b8>)\n+\tadd\tr2, pc, #664\t@ (adr r2, 25e50c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc06d8>)\n \tmovs\tr1, r3\n-\tldr\tr0, [sp, #232]\t@ 0xe8\n+\tldr\tr0, [sp, #264]\t@ 0x108\n \tmovs\tr2, r3\n \tsub.w\tr0, lr, #10747904\t@ 0xa40000\n-\tadd\tr1, pc, #144\t@ (adr r1, 25e310 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc04dc>)\n+\tadd\tr1, pc, #176\t@ (adr r1, 25e330 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc04fc>)\n \tmovs\tr1, r3\n-\tstr\tr6, [sp, #792]\t@ 0x318\n+\tstr\tr6, [sp, #824]\t@ 0x338\n \tmovs\tr2, r3\n-\tadd\tr0, pc, #208\t@ (adr r0, 25e358 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc0524>)\n+\tadd\tr0, pc, #240\t@ (adr r0, 25e378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc0544>)\n \tmovs\tr1, r3\n-\tstr\tr5, [sp, #936]\t@ 0x3a8\n+\tstr\tr5, [sp, #968]\t@ 0x3c8\n \tmovs\tr2, r3\n-\tldr\tr7, [sp, #56]\t@ 0x38\n+\tldr\tr7, [sp, #88]\t@ 0x58\n \tmovs\tr1, r3\n-\tstr\tr4, [sp, #864]\t@ 0x360\n+\tstr\tr4, [sp, #896]\t@ 0x380\n \tmovs\tr2, r3\n-\tldr\tr6, [sp, #152]\t@ 0x98\n+\tldr\tr6, [sp, #184]\t@ 0xb8\n \tmovs\tr1, r3\n-\tstr\tr4, [sp, #0]\n+\tstr\tr4, [sp, #32]\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #736\t@ 0x2e0\n+\tadd\tr2, sp, #784\t@ 0x310\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #704\t@ 0x2c0\n+\tadd\tr2, sp, #752\t@ 0x2f0\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #672\t@ 0x2a0\n+\tadd\tr2, sp, #720\t@ 0x2d0\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #640\t@ 0x280\n+\tadd\tr2, sp, #688\t@ 0x2b0\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #608\t@ 0x260\n+\tadd\tr2, sp, #656\t@ 0x290\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #576\t@ 0x240\n+\tadd\tr2, sp, #624\t@ 0x270\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #544\t@ 0x220\n+\tadd\tr2, sp, #592\t@ 0x250\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #512\t@ 0x200\n+\tadd\tr2, sp, #560\t@ 0x230\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #480\t@ 0x1e0\n+\tadd\tr2, sp, #528\t@ 0x210\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #448\t@ 0x1c0\n+\tadd\tr2, sp, #496\t@ 0x1f0\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #416\t@ 0x1a0\n+\tadd\tr2, sp, #464\t@ 0x1d0\n \tmovs\tr0, r3\n-\tadd\tr2, sp, #384\t@ 0x180\n+\tadd\tr2, sp, #432\t@ 0x1b0\n \tmovs\tr0, r3\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrb\tr4, [r5, #19]\n+\tstrb\tr4, [r6, #19]\n \tmovs\tr2, r3\n-\tstr\tr0, [sp, #248]\t@ 0xf8\n+\tstr\tr0, [sp, #280]\t@ 0x118\n \tmovs\tr2, r3\n-\tlsls\tr0, r7, #2\n+\tlsls\tr4, r0, #3\n \tmovs\tr1, r3\n-\tstr\tr0, [sp, #200]\t@ 0xc8\n+\tstr\tr0, [sp, #232]\t@ 0xe8\n \tmovs\tr2, r3\n assout::saveStrainsAsFASTAQ(std::__cxx11::list >&, ReadPool const&, std::__cxx11::basic_string, std::allocator > const&, bool, unsigned int, unsigned char, bool, bool):\n ./src/mira/assembly_output.C:2581\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tmov\tr7, r2\n \tsub\tsp, #28\n@@ -1221089,17 +1221089,17 @@\n \tmovs\tr0, r0\n \tadcs.w\tr0, r2, r4, asr #32\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tstrd\tr0, r0, [r4, #144]!\t@ 0x90\n-\tldrh\tr4, [r7, #22]\n+\tldrh\tr4, [r0, #24]\n \tmovs\tr2, r3\n-\tldrh\tr2, [r1, #24]\n+\tldrh\tr2, [r2, #24]\n \tmovs\tr2, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n assout::makeAllStrainGenomes(Contig&, unsigned char, std::__cxx11::basic_string, std::allocator >&, std::vector >&, std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::vector >, std::allocator > > >&, std::map, std::allocator >, std::less, std::allocator, std::allocator > > > >&, bool, bool) [clone .constprop.0]:\n ./src/mira/assembly_output.C:1145\n@@ -1221760,15 +1221760,15 @@\n \tstr\tr3, [sp, #32]\n \tstr\tr2, [sp, #36]\t@ 0x24\n /usr/include/c++/10/bits/basic_string.h:160\n \tstr\tr6, [sp, #24]\n \tb.n\t25ee4a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1016>\n \tnop\n \t...\n-\tldrh\tr6, [r3, #62]\t@ 0x3e\n+\tldrh\tr6, [r4, #62]\t@ 0x3e\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t25e4bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc0688>\n \tmovs\tr4, r4\n \tb.n\t25f4b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1680>\n \tmovs\tr4, r4\n@@ -1222477,29 +1222477,29 @@\n \tadds\tr7, #8\n \tstr.w\tr7, [r4, #140]\t@ 0x8c\n \tblx\tb844 \n \tb.n\t25f0cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1298>\n \tb.n\t25f174 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1340>\n \tb.n\t25f180 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc134c>\n \tnop\n-\tstrh\tr6, [r4, #50]\t@ 0x32\n+\tstrh\tr6, [r5, #50]\t@ 0x32\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tsvc\t104\t@ 0x68\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #384]\t@ 0x180\n+\tldr\tr2, [sp, #432]\t@ 0x1b0\n \tmovs\tr0, r3\n-\tldr\tr2, [sp, #352]\t@ 0x160\n+\tldr\tr2, [sp, #400]\t@ 0x190\n \tmovs\tr0, r3\n \tldr\tr4, [r1, #84]\t@ 0x54\n \tmovs\tr0, r3\n assout::saveAsACE_rewriteHeader(std::basic_fstream >&, unsigned int, unsigned int):\n ./src/mira/assembly_output.C:3237\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/postypes.h:134\n@@ -1223062,19 +1223062,19 @@\n \tb.n\t25f5a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc176e>\n \tb.n\t25f5a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc176e>\n \tb.n\t25f5a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc176e>\n \tble.n\t25f6d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc18a0>\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr4, [r1, #68]\t@ 0x44\n+\tstr\tr4, [r2, #68]\t@ 0x44\n \tmovs\tr2, r3\n-\tldr\tr1, [pc, #648]\t@ (25f86c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1a38>)\n+\tldr\tr1, [pc, #680]\t@ (25f88c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1a58>)\n \tmovs\tr4, r3\n-\tldr\tr1, [pc, #40]\t@ (25f610 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc17dc>)\n+\tldr\tr1, [pc, #72]\t@ (25f630 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc17fc>)\n \tmovs\tr4, r3\n \tblt.n\t25f5c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1794>\n \tmovs\tr4, r4\n assout::saveAsACE(std::__cxx11::list >&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:3149\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n@@ -1223687,19 +1223687,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tbpl.n\t25fa1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1be8>\n \tmovs\tr4, r4\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrb\tr2, [r1, r0]\n+\tldrb\tr2, [r2, r0]\n \tmovs\tr2, r3\n-\tb.n\t25faa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1c6c>\n+\tb.n\t25fab8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc1c84>\n \tmovs\tr0, r3\n-\tldrb\tr0, [r3, #6]\n+\tldrb\tr0, [r4, #6]\n \tmovs\tr2, r3\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter) [clone .constprop.0]:\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr6, [pc, #2224]\t@ 26037c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc2548>\n \tsub\tsp, #308\t@ 0x134\n@@ -1224765,27 +1224765,27 @@\n \tmovs\tr4, r4\n \tbmi.n\t260290 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc245c>\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tldr\tr0, [r3, #100]\t@ 0x64\n+\tldr\tr4, [r4, #100]\t@ 0x64\n \tmovs\tr0, r3\n-\tldr\tr2, [r2, #100]\t@ 0x64\n+\tldr\tr6, [r3, #100]\t@ 0x64\n \tmovs\tr0, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr6, [r0, #84]\t@ 0x54\n+\tldr\tr2, [r2, #84]\t@ 0x54\n \tmovs\tr0, r3\n-\tldr\tr0, [r0, #84]\t@ 0x54\n+\tldr\tr4, [r1, #84]\t@ 0x54\n \tmovs\tr0, r3\n \tldmia\tr5!, {r1}\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter) [clone .constprop.0]:\n /usr/include/c++/10/bits/stl_algo.h:1945\n@@ -1225774,27 +1225774,27 @@\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmia\tr3, {r1, r3, r4, r7}\n \tmovs\tr4, r4\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tstr\tr2, [r1, #84]\t@ 0x54\n+\tstr\tr6, [r2, #84]\t@ 0x54\n \tmovs\tr0, r3\n-\tstr\tr4, [r0, #84]\t@ 0x54\n+\tstr\tr0, [r2, #84]\t@ 0x54\n \tmovs\tr0, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr0, [r5, #60]\t@ 0x3c\n+\tstr\tr4, [r6, #60]\t@ 0x3c\n \tmovs\tr0, r3\n-\tstr\tr4, [r4, #60]\t@ 0x3c\n+\tstr\tr0, [r6, #60]\t@ 0x3c\n \tmovs\tr0, r3\n \tstmia\tr4!, {r3, r4, r5, r6, r7}\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n assout::saveSNPList(std::__cxx11::list >&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:400\n@@ -1226738,31 +1226738,31 @@\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr3!, {r1, r2, r3, r4, r5, r6}\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [r2, #0]\n+\tldr\tr6, [r3, #0]\n \tmovs\tr2, r3\n-\tstr\tr2, [r7, #124]\t@ 0x7c\n+\tldr\tr2, [r0, #0]\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #19\n \tmovs\tr0, r0\n-\tstr\tr6, [r4, #88]\t@ 0x58\n+\tstr\tr6, [r5, #88]\t@ 0x58\n \tmovs\tr2, r3\n \tlsrs\tr0, r5, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [r3, #72]\t@ 0x48\n+\tstr\tr6, [r4, #72]\t@ 0x48\n \tmovs\tr2, r3\n \tlsls\tr4, r0, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #5\n \tmovs\tr0, r0\n \tpop\t{r1, r2, r3, r4, pc}\n \tmovs\tr4, r4\n@@ -1227873,33 +1227873,33 @@\n \t...\n \tlsls\tr0, r0, #27\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldrsh\tr0, [r3, r3]\n+\tldrsh\tr0, [r4, r3]\n \tmovs\tr2, r3\n-\tldrsh\tr2, [r1, r3]\n+\tldrsh\tr2, [r2, r3]\n \tmovs\tr2, r3\n-\tldrb\tr0, [r7, r5]\n+\tldrb\tr0, [r0, r6]\n \tmovs\tr2, r3\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r4, r2]\n+\tstrh\tr0, [r6, r2]\n \tmovs\tr0, r3\n-\tstrh\tr2, [r4, r2]\n+\tstrh\tr6, [r5, r2]\n \tmovs\tr0, r3\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1228625,31 +1228625,31 @@\n \tb.n\t26213c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc4308>\n \tmov\tr8, r0\n \tmov\tr9, r1\n \tb.n\t262160 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc432c>\n \tnop\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #248]\t@ (262270 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc443c>)\n+\tldr\tr5, [pc, #296]\t@ (2622a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc446c>)\n \tmovs\tr0, r3\n-\tldr\tr5, [pc, #232]\t@ (262264 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc4430>)\n+\tldr\tr5, [pc, #280]\t@ (262294 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc4460>)\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadds\tr6, #116\t@ 0x74\n+\tadds\tr6, #124\t@ 0x7c\n \tmovs\tr2, r3\n-\tstmia\tr2!, {r3, r4, r6}\n+\tstmia\tr2!, {r2, r5, r6}\n \tmovs\tr0, r3\n-\tldrsb\tr6, [r1, r1]\n+\tldrsb\tr6, [r2, r1]\n \tmovs\tr2, r3\n assout::saveSNPSurroundingAsHTML(std::__cxx11::list >&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/assembly_output.C:748\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r1\n \tldr.w\tr6, [pc, #3040]\t@ 262d80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc4f4c>\n \tvpush\t{d8-d11}\n@@ -1230343,19 +1230343,19 @@\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr5, sp, #656\t@ 0x290\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r3, r2]\n+\tstrb\tr4, [r4, r2]\n \tmovs\tr2, r3\n-\tstrb\tr6, [r0, r2]\n+\tstrb\tr6, [r1, r2]\n \tmovs\tr2, r3\n-\tstrb\tr4, [r2, r2]\n+\tstrb\tr4, [r3, r2]\n \tmovs\tr2, r3\n \tlsrs\tr0, r7, #20\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #19\n \tmovs\tr0, r0\n@@ -1230363,37 +1230363,37 @@\n \tmovs\tr0, r0\n \tlsls\tr4, r0, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #5\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #17\n \tmovs\tr0, r0\n-\tpush\t{r2, r4, r5, r6, lr}\n+\tpush\t{r2, r3, r4, r5, r6, lr}\n \tmovs\tr1, r3\n-\tpush\t{r1, r4, r5, r6, lr}\n+\tpush\t{r1, r3, r4, r5, r6, lr}\n \tmovs\tr1, r3\n-\tldr\tr6, [pc, #368]\t@ (262f34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5100>)\n+\tldr\tr6, [pc, #400]\t@ (262f54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5120>)\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #360]\t@ (262f44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5110>)\n+\tldr\tr1, [pc, #392]\t@ (262f64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5130>)\n \tmovs\tr2, r3\n-\tldr\tr1, [pc, #368]\t@ (262f50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc511c>)\n+\tldr\tr1, [pc, #400]\t@ (262f70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc513c>)\n \tmovs\tr2, r3\n-\tldr\tr1, [pc, #328]\t@ (262f2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc50f8>)\n+\tldr\tr1, [pc, #360]\t@ (262f4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5118>)\n \tmovs\tr2, r3\n-\tldr\tr1, [pc, #336]\t@ (262f38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5104>)\n+\tldr\tr1, [pc, #368]\t@ (262f58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5124>)\n \tmovs\tr2, r3\n /usr/include/c++/10/bits/stl_list.h:305\n \tldr\tr5, [r5, #0]\n ./src/mira/assembly_output.C:911\n \tcmp\tr5, r4\n \tbeq.n\t262e10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc4fdc>\n ./src/mira/assembly_output.C:912\n@@ -1232244,114 +1232244,114 @@\n \tldr\tr0, [r5, #12]\n /usr/include/c++/10/bits/stl_bvector.h:93\n \tldr.w\tr1, [ip, r2, lsl #2]\n \torr.w\tr1, r1, lr\n \tstr.w\tr1, [ip, r2, lsl #2]\n /usr/include/c++/10/bits/stl_bvector.h:96\n \tb.w\t263006 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc51d2>\n-\tbx\tsp\n+\tbx\tlr\n \tmovs\tr2, r3\n-\tldr\tr0, [pc, #464]\t@ (263d6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5f38>)\n+\tldr\tr0, [pc, #496]\t@ (263d8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc5f58>)\n \tmovs\tr2, r3\n-\tbx\tr5\n+\tbx\tr6\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadd\tr0, r3\n+\tadd\tr0, r4\n \tmovs\tr2, r3\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tmuls\tr6, r6\n+\tmuls\tr6, r7\n \tmovs\tr2, r3\n-\tcmn\tr4, r5\n+\tcmn\tr4, r6\n \tmovs\tr2, r3\n-\ttst\tr6, r1\n+\ttst\tr6, r2\n \tmovs\tr2, r3\n-\ttst\tr4, r3\n+\ttst\tr4, r4\n \tmovs\tr2, r3\n-\tnegs\tr4, r0\n+\tnegs\tr4, r1\n \tmovs\tr2, r3\n-\tnegs\tr0, r1\n+\tnegs\tr0, r2\n \tmovs\tr2, r3\n-\tnegs\tr4, r1\n+\tnegs\tr4, r2\n \tmovs\tr2, r3\n-\ttst\tr0, r7\n+\tnegs\tr0, r0\n \tmovs\tr2, r3\n-\ttst\tr6, r6\n+\ttst\tr6, r7\n \tmovs\tr2, r3\n-\trors\tr2, r5\n+\trors\tr2, r6\n \tmovs\tr2, r3\n-\trors\tr6, r7\n+\ttst\tr6, r0\n \tmovs\tr2, r3\n-\trors\tr4, r7\n+\ttst\tr4, r0\n \tmovs\tr2, r3\n-\tcmp\tr2, #172\t@ 0xac\n+\tcmp\tr2, #180\t@ 0xb4\n \tmovs\tr2, r3\n-\trors\tr2, r0\n+\trors\tr2, r1\n \tmovs\tr2, r3\n-\ttst\tr0, r1\n+\ttst\tr0, r2\n \tmovs\tr2, r3\n-\tcmp\tr2, r0\n+\tcmp\tr2, r1\n \tmovs\tr2, r3\n-\trors\tr0, r0\n+\trors\tr0, r1\n \tmovs\tr2, r3\n-\tsbcs\tr0, r2\n+\tsbcs\tr0, r3\n \tmovs\tr2, r3\n-\tands\tr6, r7\n+\teors\tr6, r0\n \tmovs\tr2, r3\n-\tlsrs\tr0, r4\n+\tlsrs\tr0, r5\n \tmovs\tr2, r3\n-\tlsrs\tr4, r2\n+\tlsrs\tr4, r3\n \tmovs\tr2, r3\n-\tasrs\tr6, r7\n+\tadcs\tr6, r0\n \tmovs\tr2, r3\n-\tasrs\tr2, r6\n+\tasrs\tr2, r7\n \tmovs\tr2, r3\n-\tstrb\tr6, [r2, #7]\n+\tstrb\tr6, [r3, #7]\n \tmovs\tr3, r3\n-\teors\tr6, r6\n+\teors\tr6, r7\n \tmovs\tr2, r3\n-\teors\tr2, r5\n+\teors\tr2, r6\n \tmovs\tr2, r3\n-\tlsrs\tr2, r5\n+\tlsrs\tr2, r6\n \tmovs\tr2, r3\n-\tlsrs\tr4, r1\n+\tlsrs\tr4, r2\n \tmovs\tr2, r3\n-\tlsrs\tr0, r1\n+\tlsrs\tr0, r2\n \tmovs\tr2, r3\n-\tlsls\tr6, r7\n+\tlsrs\tr6, r0\n \tmovs\tr2, r3\n-\tsubs\tr4, r4, r5\n+\tsubs\tr4, r5, r5\n \tmovs\tr3, r3\n-\tlsls\tr0, r7\n+\tlsrs\tr0, r0\n \tmovs\tr2, r3\n-\tlsls\tr2, r3\n+\tlsls\tr2, r4\n \tmovs\tr2, r3\n-\tlsls\tr2, r3\n+\tlsls\tr2, r4\n \tmovs\tr2, r3\n-\teors\tr0, r6\n+\teors\tr0, r7\n \tmovs\tr2, r3\n-\t\t\t@ instruction: 0xe8d60019\n-\teors\tr4, r0\n+\t\t\t@ instruction: 0xe8de0019\n+\teors\tr4, r1\n \tmovs\tr2, r3\n-\tadds\tr0, r3, r7\n+\tadds\tr0, r4, r7\n \tmovs\tr3, r3\n-\tsubs\tr6, #226\t@ 0xe2\n+\tsubs\tr6, #234\t@ 0xea\n \tmovs\tr2, r3\n-\tsubs\tr6, #218\t@ 0xda\n+\tsubs\tr6, #226\t@ 0xe2\n \tmovs\tr2, r3\n-\tsubs\tr6, #212\t@ 0xd4\n+\tsubs\tr6, #220\t@ 0xdc\n \tmovs\tr2, r3\n-\tsubs\tr6, #206\t@ 0xce\n+\tsubs\tr6, #214\t@ 0xd6\n \tmovs\tr2, r3\n-\tsubs\tr6, #200\t@ 0xc8\n+\tsubs\tr6, #208\t@ 0xd0\n \tmovs\tr2, r3\n-\tsubs\tr6, #194\t@ 0xc2\n+\tsubs\tr6, #202\t@ 0xca\n \tmovs\tr2, r3\n-\tsubs\tr6, #188\t@ 0xbc\n+\tsubs\tr6, #196\t@ 0xc4\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [sp, #832]\t@ 0x340\n \tmovs\tr4, r4\n /usr/include/boost/iterator/iterator_facade.hpp:550\n \tmov\tr0, r4\n@@ -1233371,25 +1233371,25 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t26425e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc642a>\n \tb.n\t264378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc6544>\n \tb.n\t264386 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc6552>\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tsubs\tr0, #130\t@ 0x82\n+\tsubs\tr0, #138\t@ 0x8a\n \tmovs\tr2, r3\n-\tsubs\tr1, #6\n+\tsubs\tr1, #14\n \tmovs\tr2, r3\n-\tsubs\tr0, #214\t@ 0xd6\n+\tsubs\tr0, #222\t@ 0xde\n \tmovs\tr2, r3\n-\tadds\tr7, #166\t@ 0xa6\n+\tadds\tr7, #174\t@ 0xae\n \tmovs\tr2, r3\n-\tadds\tr7, #150\t@ 0x96\n+\tadds\tr7, #158\t@ 0x9e\n \tmovs\tr2, r3\n-\tadds\tr7, #24\n+\tadds\tr7, #32\n \tmovs\tr2, r3\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter) [clone .constprop.0]:\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1056]\t@ 2647e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc69ac>\n \tldr.w\tr0, [pc, #1056]\t@ 2647e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc69b0>\n@@ -1234391,27 +1234391,27 @@\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr4, [r2, #58]\t@ 0x3a\n \tmovs\tr4, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr0, #214\t@ 0xd6\n+\tadds\tr0, #222\t@ 0xde\n \tmovs\tr2, r3\n-\tadds\tr0, #190\t@ 0xbe\n+\tadds\tr0, #198\t@ 0xc6\n \tmovs\tr2, r3\n-\tadds\tr2, #96\t@ 0x60\n+\tadds\tr2, #104\t@ 0x68\n \tmovs\tr2, r3\n-\tadds\tr2, #54\t@ 0x36\n+\tadds\tr2, #62\t@ 0x3e\n \tmovs\tr2, r3\n-\tadds\tr3, #196\t@ 0xc4\n+\tadds\tr3, #204\t@ 0xcc\n \tmovs\tr2, r3\n-\tadds\tr3, #152\t@ 0x98\n+\tadds\tr3, #160\t@ 0xa0\n \tmovs\tr2, r3\n-\tadds\tr4, #66\t@ 0x42\n+\tadds\tr4, #74\t@ 0x4a\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n ./src/mira/assembly_output.C:1352\n \tmovs\tr7, #100\t@ 0x64\n@@ -1234829,19 +1234829,19 @@\n ./src/mira/assembly_output.C:1471\n \tbcc.n\t264dae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc6f7a>\n \tb.n\t264e0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc6fd8>\n \tnop\n \t...\n \tlsls\tr0, r0, #27\n \tmovs\tr0, r0\n-\tadds\tr2, #84\t@ 0x54\n+\tadds\tr2, #92\t@ 0x5c\n \tmovs\tr2, r3\n-\tadds\tr2, #98\t@ 0x62\n+\tadds\tr2, #106\t@ 0x6a\n \tmovs\tr2, r3\n-\tadds\tr2, #152\t@ 0x98\n+\tadds\tr2, #160\t@ 0xa0\n \tmovs\tr2, r3\n \tlsrs\tr0, r7, #20\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_list.h:219 (discriminator 3)\n \tldr\tr6, [sp, #48]\t@ 0x30\n ./src/mira/assembly_output.C:1397 (discriminator 3)\n \tldr\tr3, [sp, #56]\t@ 0x38\n@@ -1235420,15 +1235420,15 @@\n \tb.n\t26531c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc74e8>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsls\tr0, r0, #29\n \tmovs\tr0, r0\n-\tcmp\tr4, #128\t@ 0x80\n+\tcmp\tr4, #136\t@ 0x88\n \tmovs\tr2, r3\n \tlsrs\tr0, r0, #29\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_algo.h:1867\n \tmov\tr1, r6\n \tmov\tr0, r4\n \tbl\t26a240 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcc40c>\n@@ -1235930,21 +1235930,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #6\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #26\n \tmovs\tr0, r0\n-\tcmp\tr3, #100\t@ 0x64\n+\tcmp\tr3, #108\t@ 0x6c\n \tmovs\tr2, r3\n \tlsrs\tr0, r7, #20\n \tmovs\tr0, r0\n \tldmia\tr5!, {r1, r2, r3, r6}\n \tmovs\tr5, r4\n-\tmovs\tr1, #152\t@ 0x98\n+\tmovs\tr1, #160\t@ 0xa0\n \tmovs\tr2, r3\n /usr/include/c++/10/bits/stl_list.h:219\n \tldr\tr5, [r5, #0]\n ./src/mira/assembly_output.C:1599\n \tcmp\tr5, r8\n \tbeq.n\t26572e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc78fa>\n /usr/include/c++/10/bits/basic_string.h:6187\n@@ -1236467,55 +1236467,55 @@\n \tb.n\t265b74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc7d40>\n \tnop\n \tnop.w\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tstrh\tr0, [r0, #0]\n \teors\tr6, r6\n-\tmovs\tr7, #46\t@ 0x2e\n+\tmovs\tr7, #54\t@ 0x36\n \tmovs\tr2, r3\n-\tmovs\tr6, #222\t@ 0xde\n+\tmovs\tr6, #230\t@ 0xe6\n \tmovs\tr2, r3\n \tlsrs\tr0, r0, #17\n \tmovs\tr0, r0\n-\tstrh\tr6, [r3, #46]\t@ 0x2e\n+\tstrh\tr6, [r4, #46]\t@ 0x2e\n \tmovs\tr1, r3\n-\tsubs\tr4, r6, #2\n+\tsubs\tr4, r7, #2\n \tmovs\tr2, r3\n-\tmovs\tr6, #132\t@ 0x84\n+\tmovs\tr6, #140\t@ 0x8c\n \tmovs\tr2, r3\n-\tadds\tr4, r3, #3\n+\tadds\tr4, r4, #3\n \tmovs\tr2, r3\n-\tmovs\tr6, #56\t@ 0x38\n+\tmovs\tr6, #64\t@ 0x40\n \tmovs\tr2, r3\n-\tmovs\tr6, #34\t@ 0x22\n+\tmovs\tr6, #42\t@ 0x2a\n \tmovs\tr2, r3\n-\tmovs\tr6, #12\n+\tmovs\tr6, #20\n \tmovs\tr2, r3\n-\tmovs\tr5, #246\t@ 0xf6\n+\tmovs\tr5, #254\t@ 0xfe\n \tmovs\tr2, r3\n-\tmovs\tr5, #224\t@ 0xe0\n+\tmovs\tr5, #232\t@ 0xe8\n \tmovs\tr2, r3\n-\tmovs\tr5, #202\t@ 0xca\n+\tmovs\tr5, #210\t@ 0xd2\n \tmovs\tr2, r3\n-\tstrh\tr0, [r4, #26]\n+\tstrh\tr0, [r5, #26]\n \tmovs\tr1, r3\n-\tstrh\tr4, [r1, #26]\n+\tstrh\tr4, [r2, #26]\n \tmovs\tr1, r3\n-\tstrh\tr0, [r7, #24]\n+\tstrh\tr0, [r0, #26]\n \tmovs\tr1, r3\n-\tstrh\tr4, [r4, #24]\n+\tstrh\tr4, [r5, #24]\n \tmovs\tr1, r3\n-\tstrh\tr0, [r2, #24]\n+\tstrh\tr0, [r3, #24]\n \tmovs\tr1, r3\n-\tstrh\tr4, [r7, #22]\n+\tstrh\tr4, [r0, #24]\n \tmovs\tr1, r3\n-\tstrh\tr0, [r5, #22]\n+\tstrh\tr0, [r6, #22]\n \tmovs\tr1, r3\n-\tstrh\tr4, [r2, #22]\n+\tstrh\tr4, [r3, #22]\n \tmovs\tr1, r3\n \tblx\tb58c (unsigned long)@plt+0x4>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #2264]\t@ 266454 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc8620>\n \tmovs\tr2, #1\n \tadd\tr1, pc\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n@@ -1237724,51 +1237724,51 @@\n \tstr\tr0, [sp, #144]\t@ 0x90\n ./src/mira/assembly_output.C:1727\n \tstr\tr3, [sp, #32]\n /usr/include/c++/10/bits/stl_iterator.h:1037\n \tstr\tr5, [sp, #136]\t@ 0x88\n \tb.n\t2664d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc869c>\n \tnop\n-\tstrh\tr2, [r3, #18]\n+\tstrh\tr2, [r4, #18]\n \tmovs\tr1, r3\n-\tstrh\tr4, [r0, #18]\n+\tstrh\tr4, [r1, #18]\n \tmovs\tr1, r3\n-\tstrh\tr6, [r5, #16]\n+\tstrh\tr6, [r6, #16]\n \tmovs\tr1, r3\n-\tmovs\tr3, #230\t@ 0xe6\n+\tmovs\tr3, #238\t@ 0xee\n \tmovs\tr2, r3\n-\tstrh\tr2, [r5, #10]\n+\tstrh\tr2, [r6, #10]\n \tmovs\tr1, r3\n-\tmovs\tr0, #66\t@ 0x42\n+\tmovs\tr0, #74\t@ 0x4a\n \tmovs\tr2, r3\n-\tmovs\tr0, #70\t@ 0x46\n+\tmovs\tr0, #78\t@ 0x4e\n \tmovs\tr2, r3\n-\tmovs\tr2, #48\t@ 0x30\n+\tmovs\tr2, #56\t@ 0x38\n \tmovs\tr2, r3\n-\tsubs\tr4, r7, #5\n+\tsubs\tr4, r0, #6\n \tmovs\tr2, r3\n-\tsubs\tr6, r3, #1\n+\tsubs\tr6, r4, #1\n \tmovs\tr2, r3\n \tldr\tr0, [r7, #104]\t@ 0x68\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr6, r4, #26\n+\tasrs\tr6, r5, #26\n \tmovs\tr2, r3\n-\tsubs\tr4, r2, #1\n+\tsubs\tr4, r3, #1\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr2, r2, #2\n+\tadds\tr2, r3, #2\n \tmovs\tr2, r3\n-\tadds\tr2, r6, #1\n+\tadds\tr2, r7, #1\n \tmovs\tr2, r3\n-\tadds\tr0, r3, #2\n+\tadds\tr0, r4, #2\n \tmovs\tr2, r3\n-\tadds\tr0, r0, #2\n+\tadds\tr0, r1, #2\n \tmovs\tr2, r3\n \tlsrs\tr0, r5, #28\n \tmovs\tr0, r0\n ./src/mira/../../src/mira/stringcontainer.H:53\n \tldr.w\tr3, [pc, #2872]\t@ 266fe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc91ac>\n \tldr\tr4, [sp, #80]\t@ 0x50\n \tldr\tr0, [r4, r3]\n@@ -1239338,55 +1239338,55 @@\n \teors\tr6, r6\n \tlsls\tr4, r0, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #5\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #18\n \tmovs\tr0, r0\n-\tasrs\tr6, r1, #30\n+\tasrs\tr6, r2, #30\n \tmovs\tr2, r3\n-\tadds\tr6, r4, r0\n+\tadds\tr6, r5, r0\n \tmovs\tr2, r3\n-\tasrs\tr2, r7, #27\n+\tasrs\tr2, r0, #28\n \tmovs\tr2, r3\n-\tasrs\tr4, r0, #16\n+\tasrs\tr4, r1, #16\n \tmovs\tr2, r3\n-\tstrb\tr4, [r2, #8]\n+\tstrb\tr4, [r3, #8]\n \tmovs\tr1, r3\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r7, #6]\n+\tstrb\tr4, [r0, #7]\n \tmovs\tr1, r3\n-\tstrb\tr0, [r4, #6]\n+\tstrb\tr0, [r5, #6]\n \tmovs\tr1, r3\n-\tstrb\tr2, [r1, #6]\n+\tstrb\tr2, [r2, #6]\n \tmovs\tr1, r3\n-\tasrs\tr6, r1, #12\n+\tasrs\tr6, r2, #12\n \tmovs\tr2, r3\n-\tstrb\tr6, [r0, #3]\n+\tstrb\tr6, [r1, #3]\n \tmovs\tr1, r3\n-\tstrb\tr4, [r5, #2]\n+\tstrb\tr4, [r6, #2]\n \tmovs\tr1, r3\n-\tstrb\tr0, [r2, #2]\n+\tstrb\tr0, [r3, #2]\n \tmovs\tr1, r3\n-\tasrs\tr0, r6, #10\n+\tasrs\tr0, r7, #10\n \tmovs\tr2, r3\n \tlsrs\tr0, r4, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [r2, #108]\t@ 0x6c\n+\tldr\tr2, [r3, #108]\t@ 0x6c\n \tmovs\tr1, r3\n-\tldr\tr4, [r7, #104]\t@ 0x68\n+\tldr\tr4, [r0, #108]\t@ 0x6c\n \tmovs\tr1, r3\n-\tldr\tr6, [r2, #104]\t@ 0x68\n+\tldr\tr6, [r3, #104]\t@ 0x68\n \tmovs\tr1, r3\n-\tldr\tr6, [r6, #100]\t@ 0x64\n+\tldr\tr6, [r7, #100]\t@ 0x64\n \tmovs\tr1, r3\n-\tldr\tr0, [r1, #100]\t@ 0x64\n+\tldr\tr0, [r2, #100]\t@ 0x64\n \tmovs\tr1, r3\n-\tldr\tr6, [r5, #96]\t@ 0x60\n+\tldr\tr6, [r6, #96]\t@ 0x60\n \tmovs\tr1, r3\n \tcmp\tr0, #2\n \tbeq.n\t2670a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc9270>\n \tcmp\tr0, #3\n \tbeq.n\t267094 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc9260>\n \tcmp\tr0, #4\n \tbeq.n\t267084 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc9250>\n@@ -1241019,87 +1241019,87 @@\n /usr/include/c++/10/bits/stl_construct.h:151\n \tldr\tr2, [sp, #240]\t@ 0xf0\n \tadds\tr7, #48\t@ 0x30\n \tadds\tr5, #48\t@ 0x30\n \tcmp\tr2, r7\n \tbne.w\t266068 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc8234>\n \tb.w\t266084 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc8250>\n-\tlsrs\tr6, r1, #27\n+\tlsrs\tr6, r2, #27\n \tmovs\tr2, r3\n-\tldr\tr2, [r5, #56]\t@ 0x38\n+\tldr\tr2, [r6, #56]\t@ 0x38\n \tmovs\tr1, r3\n-\tldr\tr4, [r2, #56]\t@ 0x38\n+\tldr\tr4, [r3, #56]\t@ 0x38\n \tmovs\tr1, r3\n-\tldr\tr4, [r7, #52]\t@ 0x34\n+\tldr\tr4, [r0, #56]\t@ 0x38\n \tmovs\tr1, r3\n-\tldr\tr6, [r4, #52]\t@ 0x34\n+\tldr\tr6, [r5, #52]\t@ 0x34\n \tmovs\tr1, r3\n-\tldr\tr6, [r1, #52]\t@ 0x34\n+\tldr\tr6, [r2, #52]\t@ 0x34\n \tmovs\tr1, r3\n-\tldr\tr2, [r6, #48]\t@ 0x30\n+\tldr\tr2, [r7, #48]\t@ 0x30\n \tmovs\tr1, r3\n-\tldr\tr4, [r3, #48]\t@ 0x30\n+\tldr\tr4, [r4, #48]\t@ 0x30\n \tmovs\tr1, r3\n-\tldr\tr6, [r0, #48]\t@ 0x30\n+\tldr\tr6, [r1, #48]\t@ 0x30\n \tmovs\tr1, r3\n-\tldr\tr0, [r6, #44]\t@ 0x2c\n+\tldr\tr0, [r7, #44]\t@ 0x2c\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsrs\tr4, r3, #5\n+\tlsrs\tr4, r4, #5\n \tmovs\tr2, r3\n-\tlsrs\tr4, r3, #3\n+\tlsrs\tr4, r4, #3\n \tmovs\tr2, r3\n-\tlsrs\tr4, r0, #3\n+\tlsrs\tr4, r1, #3\n \tmovs\tr2, r3\n-\tlsrs\tr4, r5, #2\n+\tlsrs\tr4, r6, #2\n \tmovs\tr2, r3\n-\tlsrs\tr4, r2, #2\n+\tlsrs\tr4, r3, #2\n \tmovs\tr2, r3\n-\tlsrs\tr4, r7, #1\n+\tlsrs\tr4, r0, #2\n \tmovs\tr2, r3\n-\tlsrs\tr4, r4, #1\n+\tlsrs\tr4, r5, #1\n \tmovs\tr2, r3\n-\tlsrs\tr2, r5, #1\n+\tlsrs\tr2, r6, #1\n \tmovs\tr2, r3\n-\tlsrs\tr2, r3, #1\n+\tlsrs\tr2, r4, #1\n \tmovs\tr2, r3\n-\tlsrs\tr4, r1, #1\n+\tlsrs\tr4, r2, #1\n \tmovs\tr2, r3\n-\tlsrs\tr6, r7, #32\n+\tlsrs\tr6, r0, #1\n \tmovs\tr2, r3\n-\tlsrs\tr0, r6, #32\n+\tlsrs\tr0, r7, #32\n \tmovs\tr2, r3\n-\tlsrs\tr2, r4, #32\n+\tlsrs\tr2, r5, #32\n \tmovs\tr2, r3\n-\tudf\t#176\t@ 0xb0\n+\tudf\t#184\t@ 0xb8\n \tmovs\tr1, r3\n-\tstr\tr0, [r4, #76]\t@ 0x4c\n+\tstr\tr0, [r5, #76]\t@ 0x4c\n \tmovs\tr1, r3\n-\tlsls\tr2, r7, #25\n+\tlsls\tr2, r0, #26\n \tmovs\tr2, r3\n-\tstr\tr4, [r6, #64]\t@ 0x40\n+\tstr\tr4, [r7, #64]\t@ 0x40\n \tmovs\tr1, r3\n-\tlsls\tr4, r2, #19\n+\tlsls\tr4, r3, #19\n \tmovs\tr2, r3\n-\tlsls\tr0, r2, #22\n+\tlsls\tr0, r3, #22\n \tmovs\tr2, r3\n-\tlsls\tr2, r7, #19\n+\tlsls\tr2, r0, #20\n \tmovs\tr2, r3\n-\tlsls\tr4, r6, #16\n+\tlsls\tr4, r7, #16\n \tmovs\tr2, r3\n-\tlsls\tr0, r6, #15\n+\tlsls\tr0, r7, #15\n \tmovs\tr2, r3\n-\tb.n\t2676b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc9880>\n+\tb.n\t2676c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xc9890>\n \tmovs\tr0, r3\n-\tlsls\tr4, r2, #15\n+\tlsls\tr4, r3, #15\n \tmovs\tr2, r3\n-\tlsrs\tr6, r6, #25\n+\tlsrs\tr2, r0, #26\n \tmovs\tr0, r3\n-\tlsls\tr6, r3, #8\n+\tlsls\tr6, r4, #8\n \tmovs\tr2, r3\n /usr/include/c++/10/bits/vector.tcc:121\n \tldr\tr2, [sp, #112]\t@ 0x70\n ./src/mira/assembly_output.C:1956\n \tmovs\tr7, #47\t@ 0x2f\n \tstrb\tr7, [r2, #0]\n /usr/include/c++/10/bits/vector.tcc:121\n@@ -1242577,47 +1242577,47 @@\n \tb.n\t268692 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca85e>\n \tb.n\t2686a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca872>\n \tb.n\t2686ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca87a>\n \tb.n\t268670 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca83c>\n \tb.n\t26867e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca84a>\n \tb.n\t268820 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca9ec>\n \tnop\n-\tldrsh\tr0, [r4, r5]\n+\tldrsh\tr0, [r5, r5]\n \tmovs\tr1, r3\n-\tldrsh\tr4, [r7, r4]\n+\tldrsh\tr4, [r0, r5]\n \tmovs\tr1, r3\n-\tldrsh\tr6, [r0, r3]\n+\tldrsh\tr6, [r1, r3]\n \tmovs\tr1, r3\n \tadd\tr1, pc, #528\t@ (adr r1, 268aa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcac6c>)\n \tmovs\tr5, r4\n-\tlsrs\tr6, r7, #4\n+\tlsrs\tr2, r1, #5\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xfbda0019\n-\tldr\tr4, [r5, r6]\n+\t\t\t@ instruction: 0xfbe20019\n+\tldr\tr4, [r6, r6]\n \tmovs\tr1, r3\n \tldr\tr6, [sp, #856]\t@ 0x358\n \tmovs\tr5, r4\n-\tldr\tr0, [r3, r6]\n+\tldr\tr0, [r4, r6]\n \tmovs\tr1, r3\n \tldr\tr6, [sp, #776]\t@ 0x308\n \tmovs\tr5, r4\n \tlsrs\tr0, r2, #21\n \tmovs\tr0, r0\n \tldrh\tr0, [r0, r7]\n \tmovs\tr4, r4\n-\tldr\tr4, [r5, r3]\n+\tldr\tr4, [r6, r3]\n \tmovs\tr1, r3\n-\tlsls\tr2, r0, #22\n+\tlsls\tr6, r1, #22\n \tmovs\tr0, r3\n-\tb.n\t268608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca7d4>\n+\tb.n\t268620 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xca7ec>\n \tmovs\tr7, r2\n-\tlsls\tr2, r4, #21\n+\tlsls\tr6, r5, #21\n \tmovs\tr0, r3\n-\tldrsb.w\tr0, [r8, r9, lsl #1]\n-\tvst4.8\t{d0-d3}, [ip :64], r9\n+\tvld4.8\t{d0-d3}, [r0 :64], r9\n+\tldrsb.w\tr0, [r4, r9, lsl #1]\n \tldr\tr3, [sp, #376]\t@ 0x178\n \tmovs\tr5, r4\n \tldr\tr3, [sp, #272]\t@ 0x110\n \tmovs\tr5, r4\n codoninfo_t::sortByAAUpCountDown(codoninfo_t const&, codoninfo_t const&):\n ./src/mira/assembly_output.C:1242\n \tldrb.w\tr2, [r0, #40]\t@ 0x28\n@@ -1244408,15 +1244408,15 @@\n \tmovw\tr5, #65528\t@ 0xfff8\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t269534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcb700>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2696e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcb8b4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tmcr2\t0, 3, r0, cr14, cr7, {0}\n+\tmrc2\t0, 3, r0, cr10, cr7, {0}\n assout::proteinchangesummary_t* std::__uninitialized_fill_n::__uninit_fill_n(assout::proteinchangesummary_t*, unsigned int, assout::proteinchangesummary_t const&):\n /usr/include/c++/10/bits/stl_uninitialized.h:229\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tldr\tr2, [pc, #352]\t@ (269854 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcba20>)\n \tvpush\t{d8}\n \tsub\tsp, #20\n@@ -1245806,15 +1245806,15 @@\n \tnop\n \tadds\tr6, #230\t@ 0xe6\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr3, #244\t@ 0xf4\n \tmovs\tr4, r4\n-\t\t\t@ instruction: 0xf3d40017\n+\t\t\t@ instruction: 0xf3e00017\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/basic_string.h:187\n \tmov\tr5, r0\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tldr\tr2, [pc, #400]\t@ (26a3d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcc5a4>)\n@@ -1250609,33 +1250609,33 @@\n \tmovs\tr0, r0\n \tasrs\tr0, r4, #25\n \tmovs\tr4, r4\n \tasrs\tr6, r6, #3\n \tmovs\tr4, r4\n \tlsrs\tr0, r2, #28\n \tmovs\tr4, r4\n-\titt\tcc\n-\tmovcc\tr1, r3\n-\titee\tcc\t@ unpredictable \n+\titt\tmi\n+\tmovmi\tr1, r3\n+\titte\tcc\t@ unpredictable \n \tmovcc\tr1, r3\n-\titee\teq\t@ unpredictable \n-\tmoveq\tr1, r3\n-\tlsrne\tr0, r0, #18\n+\titet\tne\t@ unpredictable \n+\tmovne\tr1, r3\n+\tlsreq\tr0, r0, #18\n \tmovne\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\titet\tcc\n+\tittt\tcc\n \tmovcc\tr1, r3\n-\tbkpt\t0x009c\n+\tbkpt\t0x00a4\n \tmovcc\tr1, r3\n-\tbkpt\t0x0078\n+\tbkpt\t0x0080\n \tmovs\tr1, r3\n-\tadd\tr1, sp, #336\t@ 0x150\n+\tadd\tr1, sp, #384\t@ 0x180\n \tmovs\tr7, r2\n-\tadd\tr1, sp, #288\t@ 0x120\n+\tadd\tr1, sp, #336\t@ 0x150\n \tmovs\tr7, r2\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const [clone .constprop.0]:\n ./src/mira/../../src/mira/stringcontainer.H:114\n \tldr\tr1, [pc, #544]\t@ (26c5a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xce76c>)\n \tldr\tr2, [pc, #548]\t@ (26c5a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xce770>)\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -1250917,17 +1250917,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr7, pc, #440\t@ (adr r7, 26c784 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xce950>)\n+\tadd\tr7, pc, #488\t@ (adr r7, 26c7b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xce980>)\n \tmovs\tr7, r2\n-\tadd\tr7, pc, #432\t@ (adr r7, 26c780 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xce94c>)\n+\tadd\tr7, pc, #480\t@ (adr r7, 26c7b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xce97c>)\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1251886,35 +1251886,35 @@\n \tmovs\tr5, r4\n \tldrsh\tr0, [r4, r0]\n \tmovs\tr5, r4\n \tldrb\tr2, [r7, r7]\n \tmovs\tr5, r4\n \tldrb\tr0, [r3, r7]\n \tmovs\tr5, r4\n-\tstrb\tr6, [r2, #21]\n+\tstrb\tr6, [r3, #21]\n \tmovs\tr3, r3\n-\tstrb\tr4, [r0, #6]\n+\tstrb\tr4, [r1, #6]\n \tmovs\tr0, r3\n-\trevsh\tr4, r5\n+\trevsh\tr4, r6\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\thlt\t0x0014\n+\thlt\t0x001c\n \tmovs\tr1, r3\n-\tcbnz\tr0, 26ce2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xceff8>\n+\tcbnz\tr0, 26ce2e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xceffa>\n \tmovs\tr1, r3\n-\tstrb\tr4, [r4, #14]\n+\tstrb\tr4, [r5, #14]\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsls\tr2, r5, #24\n \tmovs\tr4, r4\n-\tpush\t{r2, r3, r4}\n+\tpush\t{r2, r5}\n \tmovs\tr1, r3\n-\tpush\t{r1, r2, r4}\n+\tpush\t{r1, r2, r3, r4}\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::tpbc_checkRead(Read&):\n ./src/mira/assembly_pbcorrect.C:642\n@@ -1252412,34 +1252412,34 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbz\tr2, 26d270 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcf43c>\n+\tcbz\tr2, 26d272 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcf43e>\n \tmovs\tr1, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldmia\tr6!, {r1, r2, r5, r7}\n+\tldmia\tr6!, {r1, r4, r5, r7}\n \tmovs\tr7, r2\n-\tstrh\tr2, [r6, #20]\n+\tstrh\tr2, [r7, #20]\n \tmovs\tr2, r3\n-\tstr\tr3, [sp, #832]\t@ 0x340\n+\tstr\tr3, [sp, #864]\t@ 0x360\n \tmovs\tr2, r3\n-\tcbz\tr2, 26d262 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcf42e>\n+\tcbz\tr2, 26d264 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xcf430>\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tcdp2\t0, 5, cr0, cr14, cr3, {1}\n-\tldr\tr2, [sp, #792]\t@ 0x318\n+\tldr\tr2, [sp, #840]\t@ 0x348\n \tmovs\tr7, r2\n-\tldr\tr2, [sp, #784]\t@ 0x310\n+\tldr\tr2, [sp, #832]\t@ 0x340\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n Assembly::tpbc_fc_makeBelieveKMERMap(int, int, AlignedDualSeq&, std::vector >&, int, int):\n ./src/mira/assembly_pbcorrect.C:1342\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -1253934,71 +1253934,71 @@\n \tmovs\tr5, r4\n \tstr\tr0, [r5, r4]\n \tmovs\tr5, r4\n \tstr\tr2, [r0, r4]\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #664\t@ 0x298\n+\tadd\tr6, sp, #696\t@ 0x2b8\n \tmovs\tr1, r3\n-\tlsrs\tr0, r4, #8\n+\tlsrs\tr0, r5, #8\n \tmovs\tr1, r3\n-\tldr\tr6, [r7, #4]\n+\tldr\tr6, [r0, #8]\n \tmovs\tr3, r3\n-\tadd\tr6, sp, #200\t@ 0xc8\n+\tadd\tr6, sp, #232\t@ 0xe8\n \tmovs\tr1, r3\n-\tadd\tr5, sp, #984\t@ 0x3d8\n+\tadd\tr5, sp, #1016\t@ 0x3f8\n \tmovs\tr1, r3\n-\tadd\tr5, sp, #576\t@ 0x240\n+\tadd\tr5, sp, #608\t@ 0x260\n \tmovs\tr1, r3\n-\tadd\tr5, sp, #600\t@ 0x258\n+\tadd\tr5, sp, #632\t@ 0x278\n \tmovs\tr1, r3\n-\tadd\tr5, sp, #616\t@ 0x268\n+\tadd\tr5, sp, #648\t@ 0x288\n \tmovs\tr1, r3\n-\tadd\tr4, sp, #976\t@ 0x3d0\n+\tadd\tr4, sp, #1008\t@ 0x3f0\n \tmovs\tr1, r3\n-\tadd\tr4, sp, #920\t@ 0x398\n+\tadd\tr4, sp, #952\t@ 0x3b8\n \tmovs\tr1, r3\n-\tadd\tr4, sp, #864\t@ 0x360\n+\tadd\tr4, sp, #896\t@ 0x380\n \tmovs\tr1, r3\n-\tadd\tr4, sp, #688\t@ 0x2b0\n+\tadd\tr4, sp, #720\t@ 0x2d0\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbnz\tr4, 26dfb2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd017e>\n+\trev\tr0, r1\n \tmovs\tr7, r2\n-\tcbnz\tr6, 26dfb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0180>\n+\trev\tr2, r0\n \tmovs\tr7, r2\n-\tbeq.n\t26dfd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd01a4>\n+\tbeq.n\t26dfe8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd01b4>\n \tmovs\tr1, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #352\t@ (adr r4, 26e0ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd02b8>)\n+\tadd\tr4, pc, #384\t@ (adr r4, 26e10c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd02d8>)\n \tmovs\tr1, r3\n-\tadd\tr4, pc, #496\t@ (adr r4, 26e180 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd034c>)\n+\tadd\tr4, pc, #528\t@ (adr r4, 26e1a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd036c>)\n \tmovs\tr1, r3\n-\tadd\tr4, pc, #480\t@ (adr r4, 26e174 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0340>)\n+\tadd\tr4, pc, #512\t@ (adr r4, 26e194 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0360>)\n \tmovs\tr1, r3\n-\tudf\t#224\t@ 0xe0\n+\tudf\t#232\t@ 0xe8\n \tmovs\tr1, r3\n-\tadd\tr4, pc, #296\t@ (adr r4, 26e0c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0290>)\n+\tadd\tr4, pc, #328\t@ (adr r4, 26e0e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd02b0>)\n \tmovs\tr1, r3\n ./src/mira/assembly_pbcorrect.C:1436\n \tmov\tfp, r0\n \tcmp\tr1, #1\n \tbne.w\t26e110 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd02dc>\n ./src/mira/assembly_pbcorrect.C:1436 (discriminator 1)\n \tmov\tr0, fp\n@@ -1254184,27 +1254184,27 @@\n ./src/mira/assembly_pbcorrect.C:1436\n \tmov\tr0, r6\n \tbl\t3e4670 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x220d8>\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #640\t@ (adr r3, 26e39c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0568>)\n+\tadd\tr3, pc, #672\t@ (adr r3, 26e3bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0588>)\n \tmovs\tr1, r3\n-\tadd\tr3, pc, #712\t@ (adr r3, 26e3e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd05b4>)\n+\tadd\tr3, pc, #744\t@ (adr r3, 26e408 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd05d4>)\n \tmovs\tr1, r3\n-\tadd\tr3, pc, #664\t@ (adr r3, 26e3bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0588>)\n+\tadd\tr3, pc, #696\t@ (adr r3, 26e3dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd05a8>)\n \tmovs\tr1, r3\n-\tadd\tr3, pc, #592\t@ (adr r3, 26e378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0544>)\n+\tadd\tr3, pc, #624\t@ (adr r3, 26e398 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0564>)\n \tmovs\tr1, r3\n-\tadd\tr3, pc, #552\t@ (adr r3, 26e354 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0520>)\n+\tadd\tr3, pc, #584\t@ (adr r3, 26e374 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0540>)\n \tmovs\tr1, r3\n-\tadd\tr3, pc, #536\t@ (adr r3, 26e348 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0514>)\n+\tadd\tr3, pc, #568\t@ (adr r3, 26e368 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0534>)\n \tmovs\tr1, r3\n-\tadd\tr3, pc, #344\t@ (adr r3, 26e28c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0458>)\n+\tadd\tr3, pc, #376\t@ (adr r3, 26e2ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0478>)\n \tmovs\tr1, r3\n Assembly::killNonHAFCoveredStretchesInReads():\n ./src/mira/assembly_pbcorrect.C:1808\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr2, #0\n \tmovs\tr3, #0\n@@ -1255083,25 +1255083,25 @@\n \tb.n\t26e7ea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd09b6>\n \tb.n\t26e7c6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0992>\n \tnop\n \tmovs\tr0, r0\n \tnegs\tr0, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #72]\t@ 0x48\n+\tldr\tr7, [sp, #104]\t@ 0x68\n \tmovs\tr1, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldrb\tr2, [r3, #10]\n+\tldrb\tr2, [r4, #10]\n \tmovs\tr0, r3\n-\tldr\tr2, [r5, #92]\t@ 0x5c\n+\tldr\tr2, [r6, #92]\t@ 0x5c\n \tmovs\tr2, r3\n-\tldr\tr6, [sp, #424]\t@ 0x1a8\n+\tldr\tr6, [sp, #456]\t@ 0x1c8\n \tmovs\tr1, r3\n-\tldr\tr6, [sp, #336]\t@ 0x150\n+\tldr\tr6, [sp, #368]\t@ 0x170\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tldmdb\tr2!, {r0, r1, r5}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n@@ -1255110,17 +1255110,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr6, [r7, #38]\t@ 0x26\n+\tstrh\tr2, [r1, #40]\t@ 0x28\n \tmovs\tr7, r2\n-\tstrh\tr2, [r7, #38]\t@ 0x26\n+\tstrh\tr6, [r0, #40]\t@ 0x28\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1255685,21 +1255685,21 @@\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t26e9f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd0bc0>\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #912]\t@ 0x390\n+\tldr\tr2, [sp, #944]\t@ 0x3b0\n \tmovs\tr1, r3\n-\tsubs\tr6, r5, r6\n+\tsubs\tr6, r6, r6\n \tmovs\tr1, r3\n-\tlsls\tr2, r4, #24\n+\tlsls\tr6, r5, #24\n \tmovs\tr0, r3\n-\tldmia\tr6!, {r2, r3, r4, r7}\n+\tldmia\tr6!, {r2, r5, r7}\n \tmovs\tr1, r3\n ./src/mira/../../src/mira/simple_2Dsignalprocessing.H:36\n \tcmp\tr4, #0\n \tbne.w\t26ef8a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd1156>\n /usr/include/c++/10/bits/stl_iterator.h:1019\n \tmov\tr3, r2\n ./src/mira/../../src/mira/simple_2Dsignalprocessing.H:34\n@@ -1256379,51 +1256379,51 @@\n \tadd\tr6, pc\n \tadd\tr8, pc\n \tb.n\t26f158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd1324>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tstr\tr5, [sp, #904]\t@ 0x388\n+\tstr\tr5, [sp, #936]\t@ 0x3a8\n \tmovs\tr1, r3\n-\tstr\tr5, [sp, #880]\t@ 0x370\n+\tstr\tr5, [sp, #912]\t@ 0x390\n \tmovs\tr1, r3\n \tb.n\t26f2e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd14b4>\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsls\tr2, r6, #1\n+\tlsls\tr6, r7, #1\n \tmovs\tr0, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #768\t@ (adr r4, 26f42c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd15f8>)\n+\tadd\tr4, pc, #816\t@ (adr r4, 26f45c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd1628>)\n \tmovs\tr7, r2\n-\tadd\tr4, pc, #752\t@ (adr r4, 26f420 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd15ec>)\n+\tadd\tr4, pc, #800\t@ (adr r4, 26f450 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd161c>)\n \tmovs\tr7, r2\n-\trevsh\tr2, r7\n+\tcbnz\tr2, 26f174 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd1340>\n \tmovs\tr1, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr4, r0, #16\n+\tasrs\tr4, r1, #16\n \tmovs\tr1, r3\n-\tstmia\tr6!, {r1, r4, r5, r6, r7}\n+\tstmia\tr6!, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr1, r3\n-\tmrc2\t0, 3, r0, cr8, cr7, {0}\n+\tmcr2\t0, 4, r0, cr4, cr7, {0}\n \tmov\tr1, r6\n \tmov\tr0, fp\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n \tcmp\tr4, r7\n \tbeq.n\t26f190 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd135c>\n \tadds\tr7, #1\n@@ -1256537,15 +1256537,15 @@\n \tstr\tr5, [sp, #152]\t@ 0x98\n \tblx\tb844 \n \tb.n\t26f1f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd13bc>\n \tb.n\t26f1f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd13bc>\n \tb.n\t26f1ea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd13b6>\n \tb.n\t26f1fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd13c8>\n \tb.n\t26f224 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd13f0>\n-\tstc2l\t0, cr0, [r2, #92]\t@ 0x5c\n+\tstc2l\t0, cr0, [lr, #92]\t@ 0x5c\n Assembly::tpbc_fillRLECorrector(int, int, AlignedDualSeq&, std::vector >, std::allocator > > >&, std::vector >&, std::vector >&):\n ./src/mira/assembly_pbcorrect.C:904\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n \tmov\tr4, r3\n \tvpush\t{d8}\n \tsub\tsp, #292\t@ 0x124\n@@ -1257858,77 +1257858,77 @@\n \tmovs\tr5, r4\n \tadds\tr1, #182\t@ 0xb6\n \tmovs\tr5, r4\n \tadds\tr1, #144\t@ 0x90\n \tmovs\tr5, r4\n \tadds\tr1, #110\t@ 0x6e\n \tmovs\tr5, r4\n-\tstr\tr1, [sp, #920]\t@ 0x398\n+\tstr\tr1, [sp, #952]\t@ 0x3b8\n \tmovs\tr1, r3\n-\tldrh\tr4, [r7, #52]\t@ 0x34\n+\tldrh\tr4, [r0, #54]\t@ 0x36\n \tmovs\tr1, r3\n \tlsrs\tr0, r3, #18\n \tmovs\tr0, r0\n \tbge.n\t26fbdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd1da8>\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #288]\t@ 0x120\n+\tstr\tr0, [sp, #320]\t@ 0x140\n \tmovs\tr1, r3\n-\tbx\tr4\n+\tbx\tr5\n \tmovs\tr3, r3\n-\tstr\tr0, [sp, #64]\t@ 0x40\n+\tstr\tr0, [sp, #96]\t@ 0x60\n \tmovs\tr1, r3\n-\tb.n\t26fc34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd1e00>\n+\tb.n\t26fc44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd1e10>\n \tmovs\tr0, r3\n \tlsrs\tr0, r6, #4\n \tmovs\tr0, r0\n-\tldrh\tr6, [r5, #48]\t@ 0x30\n+\tldrh\tr6, [r6, #48]\t@ 0x30\n \tmovs\tr1, r3\n-\tldrh\tr0, [r4, #48]\t@ 0x30\n+\tldrh\tr0, [r5, #48]\t@ 0x30\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrh\tr4, [r1, #38]\t@ 0x26\n+\tldrh\tr4, [r2, #38]\t@ 0x26\n \tmovs\tr1, r3\n-\tldrh\tr4, [r2, #30]\n+\tldrh\tr4, [r3, #30]\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr6, [r7, #34]\t@ 0x22\n+\tldrh\tr6, [r0, #36]\t@ 0x24\n \tmovs\tr1, r3\n-\tldrh\tr0, [r6, #26]\n+\tldrh\tr0, [r7, #26]\n \tmovs\tr1, r3\n-\tldrh\tr4, [r3, #32]\n+\tldrh\tr4, [r4, #32]\n \tmovs\tr1, r3\n-\tldrh\tr0, [r2, #32]\n+\tldrh\tr0, [r3, #32]\n \tmovs\tr1, r3\n-\tldrh\tr2, [r3, #22]\n+\tldrh\tr2, [r4, #22]\n \tmovs\tr1, r3\n-\tldrh\tr2, [r1, #30]\n+\tldrh\tr2, [r2, #30]\n \tmovs\tr1, r3\n-\tldrh\tr6, [r7, #28]\n+\tldrh\tr6, [r0, #30]\n \tmovs\tr1, r3\n-\tldrh\tr4, [r6, #22]\n+\tldrh\tr4, [r7, #22]\n \tmovs\tr1, r3\n-\tldrh\tr0, [r3, #22]\n+\tldrh\tr0, [r4, #22]\n \tmovs\tr1, r3\n-\tldrh\tr2, [r2, #20]\n+\tldrh\tr2, [r3, #20]\n \tmovs\tr1, r3\n-\tldrh\tr4, [r1, #20]\n+\tldrh\tr4, [r2, #20]\n \tmovs\tr1, r3\n-\tldrh\tr2, [r7, #6]\n+\tldrh\tr2, [r0, #8]\n \tmovs\tr1, r3\n-\tldrh\tr0, [r0, #8]\n+\tldrh\tr0, [r1, #8]\n \tmovs\tr1, r3\n-\tldrh\tr6, [r2, #16]\n+\tldrh\tr6, [r3, #16]\n \tmovs\tr1, r3\n-\tldrh\tr4, [r3, #4]\n+\tldrh\tr4, [r4, #4]\n \tmovs\tr1, r3\n Assembly::tpbc_generateRLEEdits(unsigned int, int, std::vector >, std::allocator > > >&):\n ./src/mira/assembly_pbcorrect.C:1483\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/../../src/mira/readpool.H:218\n \tmov\tr1, r2\n ./src/mira/assembly_pbcorrect.C:1483\n@@ -1258601,51 +1258601,51 @@\n \tmovs\tr0, r0\n \tmovs\tr7, #24\n \tmovs\tr5, r4\n \tmovs\tr6, #250\t@ 0xfa\n \tmovs\tr5, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr4, [r0, #6]\n+\tldrh\tr4, [r1, #6]\n \tmovs\tr1, r3\n-\tldrh\tr4, [r4, #4]\n+\tldrh\tr4, [r5, #4]\n \tmovs\tr1, r3\n-\tldrh\tr6, [r1, #4]\n+\tldrh\tr6, [r2, #4]\n \tmovs\tr1, r3\n \tlsrs\tr0, r6, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r0, #54]\t@ 0x36\n+\tstrh\tr4, [r1, #54]\t@ 0x36\n \tmovs\tr1, r3\n-\tstrh\tr4, [r1, #48]\t@ 0x30\n+\tstrh\tr4, [r2, #48]\t@ 0x30\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr0, [r7, #52]\t@ 0x34\n+\tstrh\tr0, [r0, #54]\t@ 0x36\n \tmovs\tr1, r3\n-\tstrh\tr6, [r5, #52]\t@ 0x34\n+\tstrh\tr6, [r6, #52]\t@ 0x34\n \tmovs\tr1, r3\n-\tstrh\tr4, [r5, #50]\t@ 0x32\n+\tstrh\tr4, [r6, #50]\t@ 0x32\n \tmovs\tr1, r3\n-\tstrh\tr6, [r1, #48]\t@ 0x30\n+\tstrh\tr6, [r2, #48]\t@ 0x30\n \tmovs\tr1, r3\n-\tstrh\tr6, [r6, #44]\t@ 0x2c\n+\tstrh\tr6, [r7, #44]\t@ 0x2c\n \tmovs\tr1, r3\n-\tstrh\tr2, [r3, #44]\t@ 0x2c\n+\tstrh\tr2, [r4, #44]\t@ 0x2c\n \tmovs\tr1, r3\n /usr/include/c++/10/bits/stl_algobase.h:690\n \tcmp\tr9, r4\n \tbeq.n\t2702a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd2472>\n /usr/include/c++/10/bits/stl_algobase.h:691\n \tsub.w\tr2, r4, r9\n \tmov\tr1, r9\n@@ -1259781,45 +1259781,45 @@\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstrh\tr4, [r2, #10]\n+\tstrh\tr4, [r3, #10]\n \tmovs\tr1, r3\n-\tstrh\tr4, [r2, #10]\n+\tstrh\tr4, [r3, #10]\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr6, [r5, #14]\n+\tstrh\tr6, [r6, #14]\n \tmovs\tr1, r3\n-\tldrb\tr0, [r7, #31]\n+\tstrh\tr0, [r0, #0]\n \tmovs\tr1, r3\n-\tldrb\tr0, [r5, #31]\n+\tldrb\tr0, [r6, #31]\n \tmovs\tr1, r3\n-\tadd\tr4, pc, #120\t@ (adr r4, 270bb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd2d80>)\n+\tadd\tr4, pc, #168\t@ (adr r4, 270be4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd2db0>)\n \tmovs\tr7, r2\n-\tldrb\tr4, [r0, #31]\n+\tldrb\tr4, [r1, #31]\n \tmovs\tr1, r3\n-\tldrb\tr0, [r7, #30]\n+\tldrb\tr0, [r0, #31]\n \tmovs\tr1, r3\n-\tldrb\tr4, [r6, #30]\n+\tldrb\tr4, [r7, #30]\n \tmovs\tr1, r3\n-\tldrb\tr2, [r2, #30]\n+\tldrb\tr2, [r3, #30]\n \tmovs\tr1, r3\n-\tadds\tr4, #140\t@ 0x8c\n+\tadds\tr4, #148\t@ 0x94\n \tmovs\tr3, r3\n-\tldrb\tr4, [r3, #25]\n+\tldrb\tr4, [r4, #25]\n \tmovs\tr1, r3\n-\tldrb\tr6, [r2, #20]\n+\tldrb\tr6, [r3, #20]\n \tmovs\tr1, r3\n-\tldrb\tr4, [r1, #17]\n+\tldrb\tr4, [r2, #17]\n \tmovs\tr1, r3\n bool loadVector(std::vector >&, std::__cxx11::basic_string, std::allocator >, unsigned char) [clone .isra.0]:\n ./src/mira/../../src/util/fileanddisk.H:164\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr7, r2\n \tldr\tr2, [pc, #408]\t@ (270cfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd2ec8>)\n \tldr\tr3, [pc, #408]\t@ (270d00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd2ecc>)\n@@ -1260035,37 +1260035,37 @@\n \tb.n\t270bd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd2da4>\n ./src/mira/../../src/util/fileanddisk.H:201\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tstmia\tr3!, {r3, r4, r5, r6, r7}\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr4, [r3, #9]\n+\tldrb\tr4, [r4, #9]\n \tmovs\tr4, r3\n \tstmia\tr3!, {r3, r5, r6, r7}\n \tmovs\tr3, r4\n \tstmia\tr3!, {r2, r3, r5, r6}\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #272]\t@ 0x110\n+\tstr\tr4, [sp, #320]\t@ 0x140\n \tmovs\tr7, r2\n-\tstrh\tr0, [r5, #30]\n+\tstrh\tr0, [r6, #30]\n \tmovs\tr0, r3\n-\tldrb\tr2, [r6, #11]\n+\tldrb\tr2, [r7, #11]\n \tmovs\tr1, r3\n-\tldrb\tr2, [r7, #12]\n+\tldrb\tr2, [r0, #13]\n \tmovs\tr1, r3\n-\tldrb\tr6, [r4, #12]\n+\tldrb\tr6, [r5, #12]\n \tmovs\tr1, r3\n-\tldr\tr6, [r4, r0]\n+\tldr\tr6, [r5, r0]\n \tmovs\tr0, r3\n-\tldr\tr4, [r2, r0]\n+\tldr\tr4, [r3, r0]\n \tmovs\tr0, r3\n-\tadd\tsp, #440\t@ 0x1b8\n+\tadd\tsp, #472\t@ 0x1d8\n \tmovs\tr1, r3\n Assembly::tpbc_fillCorrector(int, int, AlignedDualSeq&, std::vector >&, std::vector >&, std::vector >&):\n ./src/mira/assembly_pbcorrect.C:1034\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tldr.w\tr2, [pc, #3196]\t@ 2719b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd3b84>\n \tmov\tr5, r3\n@@ -1261613,71 +1261613,71 @@\n \tmovs\tr5, r4\n \tasrs\tr2, r7, #26\n \tmovs\tr5, r4\n \tasrs\tr2, r2, #26\n \tmovs\tr5, r4\n \tasrs\tr6, r5, #25\n \tmovs\tr5, r4\n-\tldrb\tr0, [r4, #7]\n+\tldrb\tr0, [r5, #7]\n \tmovs\tr1, r3\n-\tldrb\tr4, [r3, #7]\n+\tldrb\tr4, [r4, #7]\n \tmovs\tr1, r3\n \tlsrs\tr0, r6, #4\n \tmovs\tr0, r0\n \tstmia\tr0!, {r1, r4}\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr2, [r2, #2]\n+\tldrb\tr2, [r3, #2]\n \tmovs\tr1, r3\n-\tcmp\tr4, #138\t@ 0x8a\n+\tcmp\tr4, #146\t@ 0x92\n \tmovs\tr3, r3\n-\tstrb\tr2, [r2, #20]\n+\tstrb\tr2, [r3, #20]\n \tmovs\tr1, r3\n-\tstrb\tr0, [r2, #7]\n+\tstrb\tr0, [r3, #7]\n \tmovs\tr1, r3\n-\tstrb\tr4, [r0, #19]\n+\tstrb\tr4, [r1, #19]\n \tmovs\tr1, r3\n-\tstrb\tr0, [r7, #15]\n+\tstrb\tr0, [r0, #16]\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr6, [r7, #15]\n+\tstrb\tr6, [r0, #16]\n \tmovs\tr1, r3\n-\tstrb\tr4, [r2, #13]\n+\tstrb\tr4, [r3, #13]\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n-\tldr\tr2, [r2, #24]\n+\tldr\tr2, [r3, #24]\n \tmovs\tr1, r3\n-\tldr\tr0, [r6, #124]\t@ 0x7c\n+\tldr\tr0, [r7, #124]\t@ 0x7c\n \tmovs\tr1, r3\n-\tldr\tr6, [r7, #120]\t@ 0x78\n+\tldr\tr6, [r0, #124]\t@ 0x7c\n \tmovs\tr1, r3\n-\tldrb\tr2, [r3, #17]\n+\tldrb\tr6, [r4, #17]\n \tmovs\tr7, r2\n-\tldr\tr6, [r2, #120]\t@ 0x78\n+\tldr\tr6, [r3, #120]\t@ 0x78\n \tmovs\tr1, r3\n-\tldr\tr4, [r3, #104]\t@ 0x68\n+\tldr\tr4, [r4, #104]\t@ 0x68\n \tmovs\tr1, r3\n-\tldr\tr4, [r7, #108]\t@ 0x6c\n+\tldr\tr4, [r0, #112]\t@ 0x70\n \tmovs\tr1, r3\n /usr/include/c++/10/bits/stl_iterator.h:979\n \tldrd\tr9, r2, [r7]\n \tstr\tr2, [sp, #48]\t@ 0x30\n ./src/mira/assembly_pbcorrect.C:1134\n \tcmp\tr2, r9\n \tbeq.w\t271b6a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd3d36>\n@@ -1264853,43 +1264853,43 @@\n \tmovs\tr3, r4\n \tcdp2\t0, 9, cr0, cr10, cr4, {1}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr1, sp, #464\t@ 0x1d0\n \tmovs\tr3, r4\n \tcdp2\t0, 5, cr0, cr12, cr4, {1}\n-\tstr\tr4, [r5, #36]\t@ 0x24\n+\tstr\tr4, [r6, #36]\t@ 0x24\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [r5, #12]\n+\tstr\tr4, [r6, #12]\n \tmovs\tr1, r3\n-\tldrsh\tr2, [r2, r1]\n+\tldrsh\tr2, [r3, r1]\n \tmovs\tr1, r3\n-\tldrsh\tr6, [r2, r2]\n+\tldrsh\tr6, [r3, r2]\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrh\tr4, [r7, r4]\n+\tldrh\tr4, [r0, r5]\n \tmovs\tr1, r3\n-\tldrh\tr6, [r4, r3]\n+\tldrh\tr6, [r5, r3]\n \tmovs\tr1, r3\n \tadd\tr0, pc, #8\t@ (adr r0, 27325c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd5428>)\n \tmovs\tr3, r4\n-\tldr\tr6, [r4, r4]\n+\tldr\tr6, [r5, r4]\n \tmovs\tr1, r3\n-\tldrsb\tr6, [r0, r7]\n+\tldrsb\tr6, [r1, r7]\n \tmovs\tr1, r3\n-\tldrsb\tr2, [r6, r6]\n+\tldrsb\tr2, [r7, r6]\n \tmovs\tr1, r3\n-\tldrsb\tr4, [r3, r6]\n+\tldrsb\tr4, [r4, r6]\n \tmovs\tr1, r3\n-\tldrsb\tr4, [r1, r5]\n+\tldrsb\tr4, [r2, r5]\n \tmovs\tr1, r3\n-\tldrsb\tr0, [r6, r4]\n+\tldrsb\tr0, [r7, r4]\n \tmovs\tr1, r3\n /usr/include/c++/10/bits/char_traits.h:346\n \tcbz\tr2, 27327c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd5448>\n /usr/include/c++/10/bits/char_traits.h:354\n \tldr\tr1, [r6, #0]\n \tldr\tr0, [r0, #0]\n \tblx\tbbc4 \n@@ -1265311,31 +1265311,31 @@\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/stl_construct.h:151\n \tadds\tr5, #28\n \tb.n\t273550 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd571c>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrsb\tr4, [r0, r0]\n+\tldrsb\tr4, [r1, r0]\n \tmovs\tr1, r3\n-\tstrb\tr6, [r5, r7]\n+\tstrb\tr6, [r6, r7]\n \tmovs\tr1, r3\n-\tstrb\tr2, [r0, r5]\n+\tstrb\tr2, [r1, r5]\n \tmovs\tr1, r3\n-\tstrb\tr0, [r7, r4]\n+\tstrb\tr0, [r0, r5]\n \tmovs\tr1, r3\n-\tstrb\tr6, [r2, r4]\n+\tstrb\tr6, [r3, r4]\n \tmovs\tr1, r3\n-\tstrb\tr6, [r5, r3]\n+\tstrb\tr6, [r6, r3]\n \tmovs\tr1, r3\n-\tstrb\tr0, [r1, r2]\n+\tstrb\tr0, [r2, r2]\n \tmovs\tr1, r3\n-\tstrb\tr2, [r5, r1]\n+\tstrb\tr2, [r6, r1]\n \tmovs\tr1, r3\n-\tstrb\tr4, [r2, r1]\n+\tstrb\tr4, [r3, r1]\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::tryPBCorrect(unsigned int, float, int, unsigned char, bool, bool, bool, bool, Assembly::pbc_timing_t&):\n ./src/mira/assembly_pbcorrect.C:665\n@@ -1266309,27 +1266309,27 @@\n \tmovs\tr0, r0\n \tldr\tr1, [sp, #112]\t@ 0x70\n \tmovs\tr3, r4\n \tlsrs\tr4, r2, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr7, [pc, #880]\t@ (2740b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd6284>)\n+\tldr\tr7, [pc, #912]\t@ (2740d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd62a4>)\n \tmovs\tr1, r3\n-\tldr\tr5, [pc, #800]\t@ (27406c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd6238>)\n+\tldr\tr5, [pc, #832]\t@ (27408c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd6258>)\n \tmovs\tr1, r3\n-\tldr\tr5, [pc, #688]\t@ (274000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd61cc>)\n+\tldr\tr5, [pc, #720]\t@ (274020 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd61ec>)\n \tmovs\tr1, r3\n-\tldr\tr5, [pc, #592]\t@ (273fa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd6170>)\n+\tldr\tr5, [pc, #624]\t@ (273fc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd6190>)\n \tmovs\tr1, r3\n-\tldmia\tr0!, {r2, r6}\n+\tldmia\tr0!, {r2, r3, r6}\n \tmovs\tr0, r3\n-\tldrb\tr2, [r6, #12]\n+\tldrb\tr2, [r7, #12]\n \tmovs\tr1, r3\n-\tsxtb\tr0, r1\n+\tsxtb\tr4, r2\n \tmovs\tr7, r2\n \tvmov\tr1, s27\n \tvmov\tr0, s22\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n \tldr\tr0, [sp, #16]\n \tcmp\tr4, r0\n@@ -1267106,17 +1267106,17 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tsubs\tr1, r6, r5\n \tmov\tr0, r5\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t2742fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd64c8>\n \t...\n-\tldr\tr2, [pc, #176]\t@ (2743f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd65c0>)\n+\tldr\tr2, [pc, #208]\t@ (274414 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd65e0>)\n \tmovs\tr1, r3\n-\tldr\tr2, [pc, #104]\t@ (2743b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd657c>)\n+\tldr\tr2, [pc, #136]\t@ (2743d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd659c>)\n \tmovs\tr1, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n@@ -1267124,27 +1267124,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr2, [r6, r7]\n+\tstrh\tr6, [r7, r7]\n \tmovs\tr7, r2\n-\tstrh\tr4, [r5, r7]\n+\tstrh\tr0, [r7, r7]\n \tmovs\tr7, r2\n-\tldr\tr0, [r5, #32]\n+\tldr\tr0, [r6, #32]\n \tmovs\tr1, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr6, [r6, r2]\n+\tstrh\tr2, [r0, r3]\n \tmovs\tr7, r2\n-\tstrh\tr0, [r6, r2]\n+\tstrh\tr4, [r7, r2]\n \tmovs\tr7, r2\n-\tldr\tr4, [r5, #12]\n+\tldr\tr4, [r6, #12]\n \tmovs\tr1, r3\n /usr/include/c++/10/ext/new_allocator.h:115\n \tmovs\tr0, #36\t@ 0x24\n \tmul.w\tr0, r0, r4\n \tstr\tr0, [sp, #20]\n \tblx\tb6b8 \n /usr/include/c++/10/bits/vector.tcc:79\n@@ -1269184,53 +1269184,53 @@\n ./src/mira/assembly_pbcorrect.C:860\n \tcmp\tr3, r5\n \tbne.w\t27498a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd6b56>\n \tb.w\t274a9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd6c68>\n \tldr.w\tr8, [sp, #48]\t@ 0x30\n \tb.n\t2753c2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd758e>\n \tnop\n-\tadd\tr7, pc, #192\t@ (adr r7, 2754a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd766c>)\n+\tadd\tr7, pc, #240\t@ (adr r7, 2754d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd769c>)\n \tmovs\tr7, r2\n \tldrb\tr2, [r7, #30]\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tsl, sp\n+\tadd\tlr, lr\n \tmovs\tr7, r2\n-\tadd\tip, ip\n+\tadd\tr8, lr\n \tmovs\tr7, r2\n-\tldrh\tr0, [r4, r4]\n+\tldrh\tr0, [r5, r4]\n \tmovs\tr1, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tadd\tr6, r9\n+\tadd\tr2, fp\n \tmovs\tr7, r2\n-\tadd\tr0, r9\n+\tadd\tr4, sl\n \tmovs\tr7, r2\n-\tldrh\tr4, [r0, r2]\n+\tldrh\tr4, [r1, r2]\n \tmovs\tr1, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmn\tr6, r3\n+\tcmn\tr2, r5\n \tmovs\tr7, r2\n-\tcmn\tr0, r3\n+\tcmn\tr4, r4\n \tmovs\tr7, r2\n-\tldr\tr4, [r2, r4]\n+\tldr\tr4, [r3, r4]\n \tmovs\tr1, r3\n /usr/include/c++/10/ext/new_allocator.h:133\n \tmov\tr0, sl\n \tmovs\tr1, #32\n \tldr.w\tr8, [sp, #48]\t@ 0x30\n \tblx\tb538 \n /usr/include/c++/10/bits/hashtable.h:682\n@@ -1269635,25 +1269635,25 @@\n /usr/include/c++/10/bits/stl_construct.h:151\n \tb.n\t2756bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd7888>\n \tnop.w\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tadd\tsp, #408\t@ 0x198\n+\tadd\tsp, #440\t@ 0x1b8\n \tmovs\tr0, r3\n-\tstr\tr4, [r2, #52]\t@ 0x34\n+\tstr\tr4, [r3, #52]\t@ 0x34\n \tmovs\tr1, r3\n-\tldr\tr2, [sp, #872]\t@ 0x368\n+\tldr\tr2, [sp, #920]\t@ 0x398\n \tmovs\tr7, r2\n-\tldr\tr2, [sp, #456]\t@ 0x1c8\n+\tldr\tr2, [sp, #504]\t@ 0x1f8\n \tmovs\tr7, r2\n-\tldrh\tr6, [r0, #46]\t@ 0x2e\n+\tldrh\tr2, [r2, #46]\t@ 0x2e\n \tmovs\tr7, r2\n-\tldrh\tr6, [r7, #44]\t@ 0x2c\n+\tldrh\tr2, [r1, #46]\t@ 0x2e\n \tmovs\tr7, r2\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrd\tr5, r6, [r4]\n /usr/include/c++/10/bits/stl_construct.h:151\n \tcmp\tr6, r5\n \tbne.n\t275788 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd7954>\n /usr/include/c++/10/bits/stl_vector.h:335\n@@ -1270921,47 +1270921,47 @@\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr0, [r5, #26]\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr1, #162\t@ 0xa2\n+\tadds\tr1, #170\t@ 0xaa\n \tmovs\tr1, r3\n-\tlsls\tr6, r2, #27\n+\tlsls\tr6, r3, #27\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xf73a0017\n-\t\t\t@ instruction: 0xf6580017\n-\tcmp\tr7, #74\t@ 0x4a\n+\t\t\t@ instruction: 0xf7420017\n+\t\t\t@ instruction: 0xf6600017\n+\tcmp\tr7, #82\t@ 0x52\n \tmovs\tr1, r3\n-\tstrb\tr0, [r1, #25]\n+\tstrb\tr0, [r2, #25]\n \tmovs\tr0, r3\n-\tcmp\tr6, #146\t@ 0x92\n+\tcmp\tr6, #154\t@ 0x9a\n \tmovs\tr1, r3\n-\tsubs\tr1, #72\t@ 0x48\n+\tsubs\tr1, #84\t@ 0x54\n \tmovs\tr7, r2\n-\tcmp\tr6, #90\t@ 0x5a\n+\tcmp\tr6, #98\t@ 0x62\n \tmovs\tr1, r3\n-\tcmp\tr6, #44\t@ 0x2c\n+\tcmp\tr6, #52\t@ 0x34\n \tmovs\tr1, r3\n-\tcmp\tr5, #192\t@ 0xc0\n+\tcmp\tr5, #200\t@ 0xc8\n \tmovs\tr1, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tcmp\tr4, #116\t@ 0x74\n+\tcmp\tr4, #124\t@ 0x7c\n \tmovs\tr1, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tcmp\tr2, #128\t@ 0x80\n+\tcmp\tr2, #136\t@ 0x88\n \tmovs\tr1, r3\n ./src/mira/assembly_pbcorrect.C:425\n \tbl\t1df5a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x41774>\n /usr/include/c++/10/bits/stl_algobase.h:254\n \tldrd\tr6, r5, [r9, #100]\t@ 0x64\n \tldrd\tr1, r3, [r9, #116]\t@ 0x74\n \tcmp\tr5, r6\n@@ -1271983,37 +1271983,37 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr0, r3, #24\n+\tlsls\tr4, r4, #24\n \tmovs\tr7, r2\n-\tlsls\tr6, r2, #24\n+\tlsls\tr2, r4, #24\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tmovs\tr4, #42\t@ 0x2a\n+\tmovs\tr4, #50\t@ 0x32\n \tmovs\tr1, r3\n-\tbpl.n\t2768f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd8ac4>\n+\tbpl.n\t276908 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd8ad4>\n \tmovs\tr2, r3\n-\tmovs\tr3, #178\t@ 0xb2\n+\tmovs\tr3, #186\t@ 0xba\n \tmovs\tr1, r3\n-\tbmi.n\t276930 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd8afc>\n+\tbmi.n\t276940 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd8b0c>\n \tmovs\tr2, r3\n-\tadds\tr2, r0, #1\n+\tadds\tr2, r1, #1\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr2, #228\t@ 0xe4\n+\tmovs\tr2, #240\t@ 0xf0\n \tmovs\tr7, r2\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr3, [sp, #28]\n /usr/include/c++/10/bits/basic_string.h:231\n \tldr\tr2, [sp, #56]\t@ 0x38\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [r3, #0]\n@@ -1272501,19 +1272501,19 @@\n \t...\n \tstr\tr4, [r0, #88]\t@ 0x58\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [r5, #84]\t@ 0x54\n \tmovs\tr3, r4\n-\tb.n\t276a8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd8c58>\n+\tb.n\t276a9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd8c68>\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr0, #32\n+\tmovs\tr0, #40\t@ 0x28\n \tmovs\tr1, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tldr\tr7, [sp, #36]\t@ 0x24\n \tldr\tr4, [sp, #44]\t@ 0x2c\n@@ -1273188,17 +1273188,17 @@\n \tb.n\t2772e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xd94ae>\n \tnop.w\n \t...\n \tmovs\tr0, r0\n \teors\tr1, r3\n \t\t\t@ instruction: 0xedfa3beb\n \tldc2l\t12, cr3, [r4, #336]!\t@ 0x150\n-\tadds\tr0, r1, #7\n+\tadds\tr0, r2, #7\n \tmovs\tr1, r3\n-\tadds\tr4, r4, #6\n+\tadds\tr4, r5, #6\n \tmovs\tr1, r3\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n@@ -1273212,29 +1273212,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfbec0016\n-\t\t\t@ instruction: 0xfbea0016\n+\t\t\t@ instruction: 0xfbf80016\n+\t\t\t@ instruction: 0xfbf60016\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr0, r5, r7\n+\tadds\tr0, r6, r7\n \tmovs\tr1, r3\n-\tldmia\tr2, {r1, r2, r4, r6, r7}\n+\tldmia\tr2, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr2, r3\n /usr/include/c++/10/fstream:827\n \tmov\tr0, r8\n \tblx\tbb54 >::~basic_filebuf()@plt>\n /usr/include/c++/10/ostream:93\n \tldr\tr7, [sp, #36]\t@ 0x24\n \tldr\tr1, [sp, #40]\t@ 0x28\n@@ -1273603,28 +1273603,28 @@\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr4, [r0, r1]\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr0, r6, #31\n-\tmovs\tr1, r3\n-\tasrs\tr4, r3, #31\n+\tasrs\tr0, r7, #31\n \tmovs\tr1, r3\n-\tasrs\tr4, r3, #31\n+\tasrs\tr4, r4, #31\n \tmovs\tr1, r3\n \tasrs\tr4, r4, #31\n \tmovs\tr1, r3\n-\tasrs\tr0, r6, #31\n+\tasrs\tr4, r5, #31\n \tmovs\tr1, r3\n \tasrs\tr0, r7, #31\n \tmovs\tr1, r3\n \tadds\tr0, r0, r0\n \tmovs\tr1, r3\n+\tadds\tr0, r1, r0\n+\tmovs\tr1, r3\n \tldrh\tr2, [r4, r4]\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Assembly::correctPBMain():\n ./src/mira/assembly_pbcorrect.C:73\n \tldr.w\tr2, [pc, #2324]\t@ 277f04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xda0d0>\n@@ -1274778,49 +1274778,49 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr6, r0, #7\n+\tadds\tr2, r2, #7\n \tmovs\tr7, r2\n-\tadds\tr0, r7, #6\n+\tadds\tr4, r0, #7\n \tmovs\tr7, r2\n-\tcmp\tlr, r0\n+\tcmp\tlr, r1\n \tmovs\tr1, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr2, r6, #12\n+\tasrs\tr2, r7, #12\n \tmovs\tr1, r3\n-\tasrs\tr4, r7, #11\n+\tasrs\tr4, r0, #12\n \tmovs\tr1, r3\n-\tasrs\tr0, r5, #10\n+\tasrs\tr0, r6, #10\n \tmovs\tr1, r3\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tasrs\tr0, r2, #4\n+\tasrs\tr0, r3, #4\n \tmovs\tr1, r3\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n-\tasrs\tr4, r0, #6\n+\tasrs\tr4, r1, #6\n \tmovs\tr1, r3\n-\tasrs\tr2, r3, #4\n+\tasrs\tr2, r4, #4\n \tmovs\tr1, r3\n-\tasrs\tr4, r4, #2\n+\tasrs\tr4, r5, #2\n \tmovs\tr1, r3\n-\tlsrs\tr0, r6, #31\n+\tlsrs\tr0, r7, #31\n \tmovs\tr1, r3\n \tstrh\tr4, [r1, r1]\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Assembly::colourReadsByRLE():\n ./src/mira/assembly_pbcorrect.C:2055\n@@ -1275273,15 +1275273,15 @@\n \tmovw\tr9, #65528\t@ 0xfff8\n \tmovt\tr9, #32767\t@ 0x7fff\n \tb.n\t2782a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xda472>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2782c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xda494>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrd\tr0, r0, [r2, #-88]!\t@ 0x58\n+\tstrd\tr0, r0, [lr, #-88]!\t@ 0x58\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.n\t2783ce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xda59a>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n@@ -1275654,15 +1275654,15 @@\n \tmovw\tr6, #65516\t@ 0xffec\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t2785b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xda77c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2785d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xda7a4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsrs\tr6, r7, #29\n+\tlsrs\tr2, r1, #30\n \tmovs\tr7, r2\n std::vector >::_M_erase(__gnu_cxx::__normal_iterator > >):\n /usr/include/c++/10/bits/stl_iterator.h:979\n \tldr\tr2, [r0, #4]\n /usr/include/c++/10/bits/vector.tcc:171\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1042\n@@ -1276219,15 +1276219,15 @@\n \tstr\tr7, [r1, #16]\n \tstr\tr3, [r1, #20]\n \tb.n\t278876 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdaa42>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (278a30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdabfc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tb.n\t278e28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdaff4>\n+\tb.n\t278e40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdb00c>\n \tmovs\tr6, r2\n void std::_Destroy_aux::__destroy(Assembly::pbcounts_t::insertafter_t*, Assembly::pbcounts_t::insertafter_t*):\n /usr/include/c++/10/bits/stl_construct.h:151\n \tcmp\tr0, r1\n \tbeq.n\t278a66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdac32>\n /usr/include/c++/10/bits/stl_construct.h:149\n \tpush\t{r4, r5, r6, lr}\n@@ -1278143,15 +1278143,15 @@\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr0, #200\t@ 0xc8\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\torns\tr0, r6, #9961472\t@ 0x980000\n+\torns\tr0, lr, #9961472\t@ 0x980000\n \tadds\tr7, #6\n \tmovs\tr3, r4\n Assembly::rsh4_take100PC100bpHitsThatExtend(unsigned int, std::vector >&, std::vector >&, std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:2423\n \tbx\tlr\n \tnop\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n@@ -1279575,94 +1279575,94 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tadds\tr3, #40\t@ 0x28\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe988001b\n+\t\t\t@ instruction: 0xe990001b\n \tadds\tr3, #12\n \tmovs\tr3, r4\n-\tldrb.w\tr0, [lr, r6, lsl #1]\n+\tstrh.w\tr0, [sl, r6, lsl #1]\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbics.w\tr0, lr, #24\n-\tbics.w\tr0, lr, #24\n-\tldrh\tr4, [r0, #24]\n+\torr.w\tr0, r6, #24\n+\torr.w\tr0, r6, #24\n+\tldrh\tr4, [r1, #24]\n \tmovs\tr7, r2\n-\tldrh\tr2, [r1, #24]\n+\tldrh\tr2, [r2, #24]\n \tmovs\tr7, r2\n-\tldrh\tr0, [r2, #24]\n+\tldrh\tr0, [r3, #24]\n \tmovs\tr7, r2\n-\tvshr.s32\td16, d8, #2\n+\tand.w\tr0, r6, #24\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldrh\tr4, [r2, #18]\n+\tldrh\tr4, [r3, #18]\n \tmovs\tr7, r2\n-\tldrh\tr4, [r7, #14]\n+\tldrh\tr4, [r0, #16]\n \tmovs\tr7, r2\n-\tldrh\tr4, [r5, #14]\n+\tldrh\tr4, [r6, #14]\n \tmovs\tr7, r2\n-\tldrh\tr0, [r3, #14]\n+\tldrh\tr0, [r4, #14]\n \tmovs\tr7, r2\n-\tldrh\tr0, [r1, #14]\n+\tldrh\tr0, [r2, #14]\n \tmovs\tr7, r2\n-\tldrh\tr4, [r6, #12]\n+\tldrh\tr4, [r7, #12]\n \tmovs\tr7, r2\n-\tldrh\tr0, [r4, #12]\n+\tldrh\tr0, [r5, #12]\n \tmovs\tr7, r2\n-\tldrh\tr4, [r1, #12]\n+\tldrh\tr4, [r2, #12]\n \tmovs\tr7, r2\n-\tldrh\tr0, [r7, #10]\n+\tldrh\tr0, [r0, #12]\n \tmovs\tr7, r2\n-\tldrh\tr4, [r4, #10]\n+\tldrh\tr4, [r5, #10]\n \tmovs\tr7, r2\n-\tldrh\tr0, [r1, #10]\n+\tldrh\tr0, [r2, #10]\n \tmovs\tr7, r2\n-\tstrh\tr2, [r4, #58]\t@ 0x3a\n+\tstrh\tr2, [r5, #58]\t@ 0x3a\n \tmovs\tr7, r2\n-\tstrh\tr4, [r2, #58]\t@ 0x3a\n+\tstrh\tr4, [r3, #58]\t@ 0x3a\n \tmovs\tr7, r2\n-\tstrh\tr2, [r0, #58]\t@ 0x3a\n+\tstrh\tr2, [r1, #58]\t@ 0x3a\n \tmovs\tr7, r2\n-\tstrh\tr0, [r6, #56]\t@ 0x38\n+\tstrh\tr0, [r7, #56]\t@ 0x38\n \tmovs\tr7, r2\n-\tstrh\tr6, [r3, #56]\t@ 0x38\n+\tstrh\tr6, [r4, #56]\t@ 0x38\n \tmovs\tr7, r2\n-\tstrh\tr4, [r1, #56]\t@ 0x38\n+\tstrh\tr4, [r2, #56]\t@ 0x38\n \tmovs\tr7, r2\n-\tstrh\tr2, [r7, #54]\t@ 0x36\n+\tstrh\tr2, [r0, #56]\t@ 0x38\n \tmovs\tr7, r2\n-\tstrh\tr0, [r4, #54]\t@ 0x36\n+\tstrh\tr0, [r5, #54]\t@ 0x36\n \tmovs\tr7, r2\n-\tstr\tr6, [r7, #40]\t@ 0x28\n+\tstr\tr6, [r0, #44]\t@ 0x2c\n \tmovs\tr0, r3\n-\tasrs\tr4, r5, #22\n+\tasrs\tr4, r6, #22\n \tmovs\tr1, r3\n-\tldr\tr5, [pc, #200]\t@ (27a560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc72c>)\n+\tldr\tr5, [pc, #248]\t@ (27a590 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc75c>)\n \tmovs\tr7, r2\n-\tlsrs\tr6, r7, #21\n+\tlsrs\tr2, r1, #22\n \tmovs\tr7, r2\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tcmp\tr4, #84\t@ 0x54\n \tmovs\tr3, r4\n-\tstr\tr0, [r6, #20]\n+\tstr\tr0, [r7, #20]\n \tmovs\tr0, r3\n-\tasrs\tr6, r3, #17\n+\tasrs\tr6, r4, #17\n \tmovs\tr1, r3\n-\tldr\tr3, [pc, #896]\t@ (27a834 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdca00>)\n+\tldr\tr3, [pc, #944]\t@ (27a864 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdca30>)\n \tmovs\tr7, r2\n /usr/include/c++/10/bits/basic_string.h:160\n \tadd.w\tfp, sp, #88\t@ 0x58\n \tadd.w\tip, sp, #112\t@ 0x70\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr3, #0\n \tstr\tr3, [sp, #116]\t@ 0x74\n@@ -1280258,39 +1280258,39 @@\n \tblx\tb538 \n ./src/mira/assembly_reduceskimhits.C:741 (discriminator 11)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t27a87e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdca4a>\n \tb.n\t27a924 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdcaf0>\n \tnop\n-\tb.n\t27a918 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdcae4>\n+\tb.n\t27a928 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdcaf4>\n \tmovs\tr0, r3\n-\tldr\tr1, [pc, #208]\t@ (27aa08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdcbd4>)\n+\tldr\tr1, [pc, #256]\t@ (27aa38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdcc04>)\n \tmovs\tr7, r2\n-\tldr\tr1, [pc, #56]\t@ (27a974 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdcb40>)\n+\tldr\tr1, [pc, #104]\t@ (27a9a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdcb70>)\n \tmovs\tr7, r2\n-\tldrh\tr2, [r1, #14]\n+\tldrh\tr2, [r2, #14]\n \tmovs\tr7, r2\n-\tb.n\t27a4b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc684>\n+\tb.n\t27a4c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc694>\n \tmovs\tr0, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbxns\tr5\n+\tbx\tr7\n \tmovs\tr7, r2\n-\tb.n\t27a3f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc5bc>\n+\tb.n\t27a400 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc5cc>\n \tmovs\tr0, r3\n \tcpsie\ti\n \tmovs\tr6, r2\n-\tb.n\t27a454 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc620>\n+\tb.n\t27a464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc630>\n \tmovs\tr0, r3\n-\tb.n\t27a2f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc4c0>\n+\tb.n\t27a304 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdc4d0>\n \tmovs\tr0, r3\n-\tb.n\t27af24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd0f0>\n+\tb.n\t27af3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd108>\n \tmovs\tr6, r2\n Assembly::rsh4_loadNormalisedSkimHitBlock(std::__cxx11::basic_string, std::allocator > const&, unsigned long long, long long, long long, signed char, signed char):\n ./src/mira/assembly_reduceskimhits.C:890\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tsub\tsp, #356\t@ 0x164\n \tstrd\tr2, r3, [sp, #4]\n@@ -1281343,57 +1281343,57 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t27b158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd324>\n \tb.n\t27b16a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd336>\n \tmovs\tr5, #232\t@ 0xe8\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbgt.n\t27b22c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd3f8>\n+\tbgt.n\t27b23c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd408>\n \tmovs\tr3, r3\n \tmovs\tr5, #176\t@ 0xb0\n \tmovs\tr3, r4\n \tmovs\tr4, #164\t@ 0xa4\n \tmovs\tr3, r4\n-\tstrh\tr2, [r2, #14]\n+\tstrh\tr2, [r3, #14]\n \tmovs\tr7, r2\n-\tstrh\tr4, [r0, #14]\n+\tstrh\tr4, [r1, #14]\n \tmovs\tr7, r2\n \tlsls\tr0, r6, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t27b2c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd490>\n+\tb.n\t27b2d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4a0>\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t27b2e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4ac>\n+\tb.n\t27b2f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4bc>\n \tmovs\tr0, r3\n-\tb.n\t27b30c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4d8>\n+\tb.n\t27b31c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4e8>\n \tmovs\tr0, r3\n-\tb.n\t27b304 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4d0>\n+\tb.n\t27b314 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4e0>\n \tmovs\tr0, r3\n-\tb.n\t27b2f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4c4>\n+\tb.n\t27b308 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd4d4>\n \tmovs\tr0, r3\n-\tsvc\t88\t@ 0x58\n+\tsvc\t96\t@ 0x60\n \tmovs\tr0, r3\n-\tsubs\tr7, #240\t@ 0xf0\n+\tsubs\tr7, #252\t@ 0xfc\n \tmovs\tr7, r2\n-\tudf\t#238\t@ 0xee\n+\tudf\t#246\t@ 0xf6\n \tmovs\tr0, r3\n-\tsvc\t212\t@ 0xd4\n+\tsvc\t220\t@ 0xdc\n \tmovs\tr0, r3\n-\tudf\t#124\t@ 0x7c\n+\tudf\t#132\t@ 0x84\n \tmovs\tr0, r3\n-\tudf\t#160\t@ 0xa0\n+\tudf\t#168\t@ 0xa8\n \tmovs\tr0, r3\n-\tbgt.n\t27b180 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd34c>\n+\tbgt.n\t27b190 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd35c>\n \tmovs\tr0, r3\n-\tcbnz\tr4, 27b242 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd40e>\n+\tcbnz\tr0, 27b246 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd412>\n \tmovs\tr6, r2\n Assembly::rsh4_getNextSkimBlock(std::__cxx11::basic_string, std::allocator > const&, unsigned int, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:1113\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r3\n \tldr\tr5, [pc, #776]\t@ (27b504 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6d0>)\n \tldr\tr4, [pc, #776]\t@ (27b508 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6d4>)\n@@ -1281798,53 +1281798,53 @@\n \tmovs\tr3, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr6, r2, #5\n \tmovs\tr3, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbgt.n\t27b514 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6e0>\n+\tble.n\t27b524 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6f0>\n \tmovs\tr0, r3\n-\tldr\tr0, [r6, #12]\n+\tldr\tr4, [r7, #12]\n \tmovs\tr7, r2\n-\tbgt.n\t27b4e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6b0>\n+\tbgt.n\t27b4f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6c0>\n \tmovs\tr0, r3\n-\tbgt.n\t27b4e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6b4>\n+\tbgt.n\t27b4f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6c4>\n \tmovs\tr0, r3\n-\tbcc.n\t27b54c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd718>\n+\tbcc.n\t27b55c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd728>\n \tmovs\tr3, r3\n-\tble.n\t27b558 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd724>\n+\tble.n\t27b568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd734>\n \tmovs\tr0, r3\n-\tble.n\t27b538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd704>\n+\tble.n\t27b548 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd714>\n \tmovs\tr0, r3\n \tadds\tr0, r4, #0\n \tmovs\tr3, r4\n-\tblt.n\t27b4ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd678>\n+\tblt.n\t27b4bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd688>\n \tmovs\tr0, r3\n \tsubs\tr4, r2, r7\n \tmovs\tr3, r4\n-\tldrb\tr6, [r5, r5]\n+\tldrb\tr2, [r7, r5]\n \tmovs\tr7, r2\n-\tbgt.n\t27b55c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd728>\n+\tbgt.n\t27b56c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd738>\n \tmovs\tr0, r3\n-\tbgt.n\t27b560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd72c>\n+\tbgt.n\t27b570 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd73c>\n \tmovs\tr0, r3\n-\tblt.n\t27b620 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd7ec>\n+\tblt.n\t27b630 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd7fc>\n \tmovs\tr0, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tblt.n\t27b59c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd768>\n+\tblt.n\t27b5ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd778>\n \tmovs\tr0, r3\n-\tstr\tr4, [r4, #116]\t@ 0x74\n+\tstr\tr0, [r6, #116]\t@ 0x74\n \tmovs\tr7, r2\n-\tstr\tr4, [r5, #116]\t@ 0x74\n+\tstr\tr0, [r7, #116]\t@ 0x74\n \tmovs\tr7, r2\n-\tbge.n\t27b518 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6e4>\n+\tbge.n\t27b528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdd6f4>\n \tmovs\tr0, r3\n Assembly::rsh4_take100PCMappingHits(std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:1714\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #2052]\t@ 27bd70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddf3c>\n \tldr.w\tr0, [pc, #2052]\t@ 27bd74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddf40>\n@@ -1282908,30 +1282908,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbls.n\t27bd00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddecc>\n+\tbls.n\t27bd18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddee4>\n \tmovs\tr6, r2\n-\tbls.n\t27bcfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddec8>\n+\tbls.n\t27bd14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddee0>\n \tmovs\tr6, r2\n-\tvshr.s32\td16, d8, #22\n+\tvshr.s32\td16, d8, #14\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tbhi.n\t27bd0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdded8>\n+\tbhi.n\t27bd24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddef0>\n \tmovs\tr6, r2\n-\tbhi.n\t27bcf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddec4>\n+\tbhi.n\t27bd10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xddedc>\n \tmovs\tr6, r2\n-\tlsls\tr6, r5, #1\n+\tlsls\tr6, r6, #1\n \tmovs\tr1, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tmov\tr4, lr\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tr9, [pc, #764]\t@ 27c0c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde28c>\n \tadd.w\tr8, sp, #200\t@ 0xc8\n@@ -1283317,30 +1283317,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbvs.n\t27c000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1cc>\n+\tbvs.n\t27c018 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1e4>\n \tmovs\tr6, r2\n-\tbvs.n\t27bffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1c8>\n+\tbvs.n\t27c014 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1e0>\n \tmovs\tr6, r2\n-\tstcl\t0, cr0, [ip], {24}\n+\tldcl\t0, cr0, [r4], {24}\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbpl.n\t27c010 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1dc>\n+\tbpl.n\t27c028 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1f4>\n \tmovs\tr6, r2\n-\tbpl.n\t27bffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1c8>\n+\tbpl.n\t27c014 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde1e0>\n \tmovs\tr6, r2\n-\tldc2l\t0, cr0, [r2, #-96]\t@ 0xffffffa0\n+\tldc2l\t0, cr0, [sl, #-96]\t@ 0xffffffa0\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tldr\tr6, [sp, #12]\n \tstr\tr5, [sp, #36]\t@ 0x24\n \tsubs\tr1, r6, r5\n \tmovw\tr6, #43691\t@ 0xaaab\n \tmovt\tr6, #2730\t@ 0xaaa\n@@ -1284720,50 +1284720,50 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbeq.n\t27ccac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdee78>\n+\tbeq.n\t27ccc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdee90>\n \tmovs\tr6, r2\n-\tbeq.n\t27cca4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdee70>\n+\tbeq.n\t27ccbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdee88>\n \tmovs\tr6, r2\n-\tb.n\t27c91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdeae8>\n+\tb.n\t27c92c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdeaf8>\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr7!, {r2, r6}\n+\tldmia\tr7!, {r4, r6}\n \tmovs\tr6, r2\n-\tldmia\tr7!, {r1, r2, r4, r5}\n+\tldmia\tr7!, {r1, r6}\n \tmovs\tr6, r2\n-\t\t\t@ instruction: 0xf7020018\n+\t\t\t@ instruction: 0xf70a0018\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r1, r2, r3, r4, r6, r7}\n+\tldmia\tr5, {r1, r3, r5, r6, r7}\n \tmovs\tr6, r2\n-\tldmia\tr5!, {r3, r4, r6, r7}\n+\tldmia\tr5, {r2, r5, r6, r7}\n \tmovs\tr6, r2\n-\tb.n\t27c44c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde618>\n+\tb.n\t27c45c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde628>\n \tmovs\tr0, r3\n-\tldmia\tr4!, {r5, r7}\n+\tldmia\tr4!, {r2, r3, r5, r7}\n \tmovs\tr6, r2\n-\tldmia\tr4, {r2, r3, r4, r7}\n+\tldmia\tr4!, {r3, r5, r7}\n \tmovs\tr6, r2\n-\tb.n\t27d1e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf3b0>\n+\tb.n\t27d1f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf3c0>\n \tmovs\tr0, r3\n-\tldmia\tr3!, {r5, r7}\n+\tldmia\tr3, {r2, r3, r5, r7}\n \tmovs\tr6, r2\n-\tldmia\tr3!, {r2, r4, r7}\n+\tldmia\tr3!, {r5, r7}\n \tmovs\tr6, r2\n-\tbfi\tr0, r2, #0, #25\n+\tbfi\tr0, sl, #0, #25\n ./src/mira/assembly_reduceskimhits.C:1830\n \tldrb\tr6, [r1, #17]\n \tlsls\tr5, r6, #31\n \tbpl.w\t27c290 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xde45c>\n ./src/mira/assembly_reduceskimhits.C:1831\n \tldrh\tr5, [r1, #20]\n \tlsls\tr6, r5, #17\n@@ -1285214,17 +1285214,17 @@\n \tb.n\t27ce6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf038>\n \tb.n\t27ce7e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf04a>\n \tb.n\t27ce6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf038>\n \tb.n\t27ce7e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf04a>\n \tb.n\t27ceaa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf076>\n \tb.n\t27ceba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf086>\n \tnop\n-\tldr\tr6, [sp, #328]\t@ 0x148\n+\tldr\tr6, [sp, #376]\t@ 0x178\n \tmovs\tr6, r2\n-\tldr\tr6, [sp, #296]\t@ 0x128\n+\tldr\tr6, [sp, #344]\t@ 0x158\n \tmovs\tr6, r2\n Assembly::rsh4_takeReptNonReptBorders(unsigned char, std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:1985\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr6, r3\n \tmov\tsl, r2\n \tsub\tsp, #8\n@@ -1286239,19 +1286239,19 @@\n \tb.n\t27d7ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdf97a>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstc2\t0, cr0, [ip, #-136]\t@ 0xffffff78\n \tldc2l\t0, cr0, [r2], {34}\t@ 0x22\n \tldrb.w\tr0, [sl, #34]\t@ 0x22\n-\tbkpt\t0x000e\n+\tbkpt\t0x001a\n \tmovs\tr6, r2\n-\tbkpt\t0x000a\n+\tbkpt\t0x0016\n \tmovs\tr6, r2\n-\tbmi.n\t27d870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdfa3c>\n+\tbmi.n\t27d880 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdfa4c>\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1286956,19 +1286956,19 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t27dd6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdff38>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf7500022\n \t\t\t@ instruction: 0xf7160022\n \t\t\t@ instruction: 0xf2dc0022\n-\t\t\t@ instruction: 0xb850\n+\t\t\t@ instruction: 0xb85c\n \tmovs\tr6, r2\n-\t\t\t@ instruction: 0xb84c\n+\t\t\t@ instruction: 0xb858\n \tmovs\tr6, r2\n-\tldmia\tr6!, {r1, r2, r7}\n+\tldmia\tr6!, {r1, r2, r3, r7}\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1287964,31 +1287964,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbz\tr6, 27e5d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe079c>\n-\tmovs\tr6, r2\n \tcbz\tr2, 27e5d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe07a0>\n \tmovs\tr6, r2\n-\tldmia\tr1, {r1, r2, r3, r4, r5, r7}\n+\tcbz\tr6, 27e5d6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe07a2>\n+\tmovs\tr6, r2\n+\tldmia\tr1, {r1, r2, r6, r7}\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tsxtb\tr2, r2\n+\tsxtb\tr6, r3\n \tmovs\tr6, r2\n-\tsxtb\tr6, r1\n+\tsxtb\tr2, r3\n \tmovs\tr6, r2\n-\tldmia\tr0!, {r1, r3, r7}\n+\tldmia\tr0!, {r1, r4, r7}\n \tmovs\tr0, r3\n Assembly::rsh4_takeIdenticalReadHits(unsigned int, std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:2662\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r0\n \tldr\tr0, [pc, #808]\t@ (27e8c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe0a8c>)\n \tvpush\t{d8}\n@@ -1289033,31 +1289033,31 @@\n \tnop\n \tb.n\t27ea8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe0c58>\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t27ea74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe0c40>\n \tmovs\tr2, r4\n-\tadd\tr7, pc, #336\t@ (adr r7, 27eee8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe10b4>)\n+\tadd\tr7, pc, #368\t@ (adr r7, 27ef08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe10d4>)\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #432\t@ (adr r5, 27ef50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe111c>)\n+\tadd\tr5, pc, #464\t@ (adr r5, 27ef70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe113c>)\n \tmovs\tr0, r3\n-\tadd\tr5, pc, #384\t@ (adr r5, 27ef24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe10f0>)\n+\tadd\tr5, pc, #416\t@ (adr r5, 27ef44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1110>)\n \tmovs\tr0, r3\n \tb.n\t27e640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe080c>\n \tmovs\tr2, r4\n-\tadd\tr1, sp, #752\t@ 0x2f0\n+\tadd\tr1, sp, #800\t@ 0x320\n \tmovs\tr6, r2\n-\tadd\tr1, sp, #736\t@ 0x2e0\n+\tadd\tr1, sp, #784\t@ 0x310\n \tmovs\tr6, r2\n-\tite\t\n+\titt\t\n \tmov\tr0, r3\n-\tlslal\tr4, r2, #23\n+\tlsl\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1289065,19 +1289065,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #544\t@ 0x220\n+\tadd\tr0, sp, #592\t@ 0x250\n \tmovs\tr6, r2\n-\tadd\tr0, sp, #528\t@ 0x210\n+\tadd\tr0, sp, #576\t@ 0x240\n \tmovs\tr6, r2\n-\tbkpt\t0x00c0\n+\tbkpt\t0x00c8\n \tmovs\tr0, r3\n Assembly::rsh4_takeNeedAllOverlaps_weakgood(std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:2767\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n \tldr.w\tr5, [pc, #1120]\t@ 27f248 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1414>\n \tldr.w\tr4, [pc, #1120]\t@ 27f24c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1418>\n@@ -1289659,23 +1289659,23 @@\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t27f50c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe16d8>\n \tmovs\tr2, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #328\t@ (adr r2, 27f3a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1570>)\n+\tadd\tr2, pc, #360\t@ (adr r2, 27f3c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1590>)\n \tmovs\tr0, r3\n-\tldr\tr7, [sp, #160]\t@ 0xa0\n+\tldr\tr7, [sp, #192]\t@ 0xc0\n \tmovs\tr0, r3\n-\tldr\tr7, [sp, #112]\t@ 0x70\n+\tldr\tr7, [sp, #144]\t@ 0x90\n \tmovs\tr0, r3\n \tudf\t#8\n \tmovs\tr2, r4\n-\tldr\tr6, [sp, #864]\t@ 0x360\n+\tldr\tr6, [sp, #896]\t@ 0x380\n \tmovs\tr0, r3\n \tble.n\t27f1c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1394>\n \tmovs\tr2, r4\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Assembly::rsh4_takeTemplateOverlaps(std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:2891\n@@ -1290440,31 +1290440,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #392]\t@ 0x188\n+\tldr\tr7, [sp, #440]\t@ 0x1b8\n \tmovs\tr6, r2\n-\tldr\tr7, [sp, #376]\t@ 0x178\n+\tldr\tr7, [sp, #424]\t@ 0x1a8\n \tmovs\tr6, r2\n-\tpush\t{r1, r3, r4, r7, lr}\n+\tpush\t{r1, r5, r7, lr}\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #664]\t@ 0x298\n+\tldr\tr5, [sp, #712]\t@ 0x2c8\n \tmovs\tr6, r2\n-\tldr\tr5, [sp, #648]\t@ 0x288\n+\tldr\tr5, [sp, #696]\t@ 0x2b8\n \tmovs\tr6, r2\n-\tcbz\tr6, 27f8f6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1ac2>\n+\tcbz\tr6, 27f8f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe1ac4>\n \tmovs\tr0, r3\n ./src/mira/assembly_reduceskimhits.C:2902\n \tldr\tr0, [r5, #52]\t@ 0x34\n ./src/mira/../../src/mira/readpool.H:123\n \tcmp\tr0, r3\n \tbcs.w\t27f6ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe187a>\n ./src/mira/../../src/mira/read.H:841\n@@ -1292054,61 +1292054,61 @@\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #648]\t@ 0x288\n+\tstr\tr4, [sp, #680]\t@ 0x2a8\n \tmovs\tr0, r3\n-\tstr\tr3, [sp, #376]\t@ 0x178\n+\tstr\tr3, [sp, #408]\t@ 0x198\n \tmovs\tr0, r3\n \tbeq.n\t280418 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe25e4>\n \tmovs\tr2, r4\n-\tstr\tr5, [sp, #840]\t@ 0x348\n+\tstr\tr5, [sp, #888]\t@ 0x378\n \tmovs\tr6, r2\n-\tstr\tr5, [sp, #816]\t@ 0x330\n+\tstr\tr5, [sp, #864]\t@ 0x360\n \tmovs\tr6, r2\n-\tadd\tr4, sp, #24\n+\tadd\tr4, sp, #56\t@ 0x38\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #240]\t@ 0xf0\n+\tstr\tr5, [sp, #288]\t@ 0x120\n \tmovs\tr6, r2\n-\tstr\tr5, [sp, #184]\t@ 0xb8\n+\tstr\tr5, [sp, #232]\t@ 0xe8\n \tmovs\tr6, r2\n-\tpop\t{r2, r3, r4, r5, r6, r7}\n+\tpop\t{r2, pc}\n \tmovs\tr0, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #96]\t@ 0x60\n+\tstr\tr2, [sp, #144]\t@ 0x90\n \tmovs\tr6, r2\n-\tstr\tr2, [sp, #80]\t@ 0x50\n+\tstr\tr2, [sp, #128]\t@ 0x80\n \tmovs\tr6, r2\n-\tadd\tr0, sp, #320\t@ 0x140\n+\tadd\tr0, sp, #352\t@ 0x160\n \tmovs\tr0, r3\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #824]\t@ 0x338\n+\tstr\tr0, [sp, #872]\t@ 0x368\n \tmovs\tr6, r2\n-\tstr\tr0, [sp, #808]\t@ 0x328\n+\tstr\tr0, [sp, #856]\t@ 0x358\n \tmovs\tr6, r2\n-\tadd\tr7, pc, #24\t@ (adr r7, 280564 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe2730>)\n+\tadd\tr7, pc, #56\t@ (adr r7, 280584 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe2750>)\n \tmovs\tr0, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr5, sp, #224\t@ 0xe0\n \tadd\tr4, sp, #160\t@ 0xa0\n \tmov\tr0, r5\n \tblx\tbcc4 \n \tldr\tr0, [pc, #816]\t@ (280888 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe2a54>)\n@@ -1292521,39 +1292521,39 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r6, #56]\t@ 0x38\n+\tldrh\tr0, [r0, #58]\t@ 0x3a\n \tmovs\tr6, r2\n-\tldrh\tr0, [r5, #56]\t@ 0x38\n+\tldrh\tr4, [r6, #56]\t@ 0x38\n \tmovs\tr6, r2\n-\t\t\t@ instruction: 0xb6f6\n+\t\t\t@ instruction: 0xb6fe\n \tmovs\tr0, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrh\tr6, [r4, #50]\t@ 0x32\n+\tldrh\tr2, [r6, #50]\t@ 0x32\n \tmovs\tr6, r2\n-\tldrh\tr2, [r4, #50]\t@ 0x32\n+\tldrh\tr6, [r5, #50]\t@ 0x32\n \tmovs\tr6, r2\n-\tadd\tr4, pc, #632\t@ (adr r4, 280b38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe2d04>)\n+\tadd\tr4, pc, #664\t@ (adr r4, 280b58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe2d24>)\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldrh\tr0, [r7, #46]\t@ 0x2e\n+\tldrh\tr4, [r0, #48]\t@ 0x30\n \tmovs\tr6, r2\n-\tldrh\tr4, [r5, #46]\t@ 0x2e\n+\tldrh\tr0, [r7, #46]\t@ 0x2e\n \tmovs\tr6, r2\n-\tpush\t{r1, r3, r4, r5, r7, lr}\n+\tpush\t{r1, r6, r7, lr}\n \tmovs\tr0, r3\n ./src/mira/assembly_reduceskimhits.C:1413\n \tldrh\tr0, [r4, #20]\n \tldr\tr1, [r4, #16]\n \tlsls\tr5, r0, #17\n /usr/include/c++/10/bits/stl_bvector.h:87\n \tldr.w\tr0, [fp, #1860]\t@ 0x744\n@@ -1293312,39 +1293312,39 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr0, [r3, #4]\n+\tldrh\tr4, [r4, #4]\n \tmovs\tr6, r2\n-\tldrh\tr4, [r2, #4]\n+\tldrh\tr0, [r4, #4]\n \tmovs\tr6, r2\n-\tldr\tr6, [sp, #832]\t@ 0x340\n+\tldr\tr6, [sp, #864]\t@ 0x360\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr6, [r2, #60]\t@ 0x3c\n+\tstrh\tr2, [r4, #60]\t@ 0x3c\n \tmovs\tr6, r2\n-\tstrh\tr2, [r1, #60]\t@ 0x3c\n+\tstrh\tr6, [r2, #60]\t@ 0x3c\n \tmovs\tr6, r2\n-\tadd\tr7, sp, #352\t@ 0x160\n+\tadd\tr7, sp, #384\t@ 0x180\n \tmovs\tr0, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tstrh\tr4, [r6, #54]\t@ 0x36\n+\tstrh\tr0, [r0, #56]\t@ 0x38\n \tmovs\tr6, r2\n-\tstrh\tr0, [r5, #54]\t@ 0x36\n+\tstrh\tr4, [r6, #54]\t@ 0x36\n \tmovs\tr6, r2\n-\tadd\tr6, sp, #728\t@ 0x2d8\n+\tadd\tr6, sp, #760\t@ 0x2f8\n \tmovs\tr0, r3\n ./src/mira/../../src/mira/readpool.H:123\n \tadd\tr4, sp, #160\t@ 0xa0\n \tmov\tr0, r4\n \tbl\t2798a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xdba70>\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #980]\t@ (281300 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe34cc>)\n@@ -1293854,31 +1293854,31 @@\n \tb.n\t281224 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe33f0>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t2811da , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe33a6>\n \tb.n\t2811ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe33b8>\n \tb.n\t281232 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe33fe>\n \tb.n\t281242 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe340e>\n \tnop\n-\tstrh\tr6, [r1, #46]\t@ 0x2e\n+\tstrh\tr2, [r3, #46]\t@ 0x2e\n \tmovs\tr6, r2\n-\tstrh\tr2, [r1, #46]\t@ 0x2e\n+\tstrh\tr6, [r2, #46]\t@ 0x2e\n \tmovs\tr6, r2\n-\tldr\tr4, [sp, #24]\n+\tldr\tr4, [sp, #56]\t@ 0x38\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrh\tr0, [r1, r6]\n+\tldrh\tr4, [r2, r6]\n \tmovs\tr6, r2\n-\tldrh\tr4, [r0, r3]\n+\tldrh\tr0, [r2, r3]\n \tmovs\tr6, r2\n-\tldrh\tr4, [r7, r2]\n+\tldrh\tr0, [r1, r3]\n \tmovs\tr6, r2\n Assembly::rsh4_takeNonReptHitsThatExtend(unsigned int, std::vector >&, std::vector >&, unsigned char, std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:1896\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r2\n \tldr\tr2, [pc, #808]\t@ (281654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe3820>)\n \tvpush\t{d8-d9}\n@@ -1296108,63 +1296108,63 @@\n \tb.n\t282402 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe45ce>\n \tuxtb\tr2, r6\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tuxtb\tr2, r4\n \tmovs\tr2, r4\n-\tstrb\tr4, [r4, #16]\n+\tstrb\tr4, [r5, #16]\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrb\tr6, [r5, #1]\n+\tstrb\tr6, [r6, #1]\n \tmovs\tr0, r3\n-\tstrb\tr0, [r4, #1]\n+\tstrb\tr0, [r5, #1]\n \tmovs\tr0, r3\n \tadd\tr7, sp, #280\t@ 0x118\n \tmovs\tr2, r4\n-\tstrb\tr0, [r0, #18]\n+\tstrb\tr4, [r1, #18]\n \tmovs\tr6, r2\n-\tstrb\tr4, [r7, #17]\n+\tstrb\tr0, [r1, #18]\n \tmovs\tr6, r2\n-\tldrh\tr0, [r7, #20]\n+\tldrh\tr0, [r0, #22]\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr0, [r2, #16]\n+\tstrb\tr4, [r3, #16]\n \tmovs\tr6, r2\n-\tstrb\tr4, [r0, #16]\n+\tstrb\tr0, [r2, #16]\n \tmovs\tr6, r2\n-\tldr\tr3, [sp, #848]\t@ 0x350\n+\tldr\tr3, [sp, #880]\t@ 0x370\n \tmovs\tr0, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tstrb\tr2, [r3, #11]\n+\tstrb\tr6, [r4, #11]\n \tmovs\tr6, r2\n-\tstrb\tr6, [r2, #11]\n+\tstrb\tr2, [r4, #11]\n \tmovs\tr6, r2\n-\tldrh\tr2, [r2, #8]\n+\tldrh\tr2, [r3, #8]\n \tmovs\tr0, r3\n-\tstrb\tr2, [r7, #8]\n+\tstrb\tr6, [r0, #9]\n \tmovs\tr6, r2\n-\tstrb\tr6, [r6, #8]\n+\tstrb\tr2, [r0, #9]\n \tmovs\tr6, r2\n-\tldrh\tr2, [r6, #2]\n+\tldrh\tr2, [r7, #2]\n \tmovs\tr0, r3\n-\tstrb\tr2, [r4, #6]\n+\tstrb\tr6, [r5, #6]\n \tmovs\tr6, r2\n-\tstrb\tr6, [r3, #6]\n+\tstrb\tr2, [r5, #6]\n \tmovs\tr6, r2\n-\tstrh\tr2, [r3, #62]\t@ 0x3e\n+\tstrh\tr2, [r4, #62]\t@ 0x3e\n \tmovs\tr0, r3\n Assembly::rsh4_flagMulticopyReads(std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/mira/assembly_reduceskimhits.C:1589\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n \tldr\tr5, [pc, #428]\t@ (282658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe4824>)\n \tldr\tr0, [pc, #428]\t@ (28265c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe4828>)\n@@ -1297135,41 +1297135,41 @@\n \tb.n\t282c22 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe4dee>\n \tadd\tr0, sp, #936\t@ 0x3a8\n \tmovs\tr2, r4\n \tadd\tr0, sp, #848\t@ 0x350\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr6, r1, #6\n+\tlsrs\tr6, r2, #6\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [r5, #116]\t@ 0x74\n+\tstr\tr6, [r6, #116]\t@ 0x74\n \tmovs\tr0, r3\n-\tstr\tr0, [r2, #36]\t@ 0x24\n+\tstr\tr4, [r3, #36]\t@ 0x24\n \tmovs\tr6, r2\n-\tadds\tr3, #162\t@ 0xa2\n+\tadds\tr3, #170\t@ 0xaa\n \tmovs\tr1, r3\n \tadd\tr5, pc, #264\t@ (adr r5, 282d60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe4f2c>)\n \tmovs\tr2, r4\n-\tstmia\tr3!, {r2, r3, r4, r7}\n+\tstmia\tr3!, {r3, r5, r7}\n \tmovs\tr6, r2\n-\tstr\tr6, [r2, #92]\t@ 0x5c\n+\tstr\tr6, [r3, #92]\t@ 0x5c\n \tmovs\tr0, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr0, r1, #23\n+\tlsls\tr0, r2, #23\n \tmovs\tr7, r2\n-\tstr\tr2, [r6, #84]\t@ 0x54\n+\tstr\tr2, [r7, #84]\t@ 0x54\n \tmovs\tr0, r3\n-\tlsls\tr4, r1, #20\n+\tlsls\tr4, r2, #20\n \tmovs\tr7, r2\n-\tstr\tr6, [r2, #80]\t@ 0x50\n+\tstr\tr6, [r3, #80]\t@ 0x50\n \tmovs\tr0, r3\n Assembly::rsh4_tNTSEhelper(unsigned int, ADSEstimator&, std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > >&):\n ./src/mira/assembly_reduceskimhits.C:2632\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr6, r3\n /usr/include/c++/10/bits/stl_iterator.h:979\n \tldrd\tr5, r3, [r3]\n@@ -1298711,31 +1298711,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrsh\tr2, [r7, r6]\n+\tldrsh\tr6, [r0, r7]\n \tmovs\tr6, r2\n-\tldrsh\tr6, [r6, r6]\n+\tldrsh\tr2, [r0, r7]\n \tmovs\tr6, r2\n-\tstrb\tr2, [r6, #23]\n+\tstrb\tr2, [r7, #23]\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsh\tr2, [r0, r2]\n+\tldrsh\tr6, [r1, r2]\n \tmovs\tr6, r2\n-\tldrsh\tr6, [r7, r1]\n+\tldrsh\tr2, [r1, r2]\n \tmovs\tr6, r2\n-\tstrb\tr2, [r7, #18]\n+\tstrb\tr2, [r0, #19]\n \tmovs\tr0, r3\n ./src/mira/../../src/mira/readpool.H:123\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tmov\tr0, r4\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n /usr/include/c++/10/bits/stl_bvector.h:550\n@@ -1299662,31 +1299662,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrsb\tr4, [r3, r6]\n+\tldrsb\tr0, [r5, r6]\n \tmovs\tr6, r2\n-\tldrsb\tr0, [r3, r6]\n+\tldrsb\tr4, [r4, r6]\n \tmovs\tr6, r2\n-\tldr\tr4, [r2, #92]\t@ 0x5c\n+\tldr\tr4, [r3, #92]\t@ 0x5c\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrsb\tr2, [r3, r1]\n+\tldrsb\tr6, [r4, r1]\n \tmovs\tr6, r2\n-\tldrsb\tr6, [r2, r1]\n+\tldrsb\tr2, [r4, r1]\n \tmovs\tr6, r2\n-\tldr\tr2, [r2, #72]\t@ 0x48\n+\tldr\tr2, [r3, #72]\t@ 0x48\n \tmovs\tr0, r3\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #224\t@ 0xe0\n /usr/include/c++/10/ostream:391\n \tldr.w\tfp, [pc, #804]\t@ 2842b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe647c>\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, r8\n@@ -1300098,31 +1300098,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr2, [r1, r3]\n+\tstrb\tr6, [r2, r3]\n \tmovs\tr6, r2\n-\tstrb\tr6, [r0, r3]\n+\tstrb\tr2, [r2, r3]\n \tmovs\tr6, r2\n-\tldr\tr2, [r0, #48]\t@ 0x30\n+\tldr\tr2, [r1, #48]\t@ 0x30\n \tmovs\tr0, r3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrh\tr0, [r1, r7]\n+\tstrh\tr4, [r2, r7]\n \tmovs\tr6, r2\n-\tstrh\tr4, [r7, r6]\n+\tstrh\tr0, [r1, r7]\n \tmovs\tr6, r2\n-\tldrb\tr2, [r1, #14]\n+\tldrb\tr2, [r2, #14]\n \tmovs\tr0, r3\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tb.n\t284208 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe63d4>\n \tb.n\t284232 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe63fe>\n \tb.n\t284284 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6450>\n \tnop\n@@ -1300861,37 +1300861,37 @@\n \t...\n \tldrh\tr0, [r0, #16]\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr2, [r5, #14]\n \tmovs\tr2, r4\n-\tldr\tr3, [pc, #664]\t@ (284b50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6d1c>)\n+\tldr\tr3, [pc, #696]\t@ (284b70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6d3c>)\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #1000]\t@ (284ca8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6e74>)\n+\tldr\tr7, [pc, #24]\t@ (2848d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6aa4>)\n \tmovs\tr6, r2\n-\tldr\tr3, [pc, #592]\t@ (284b14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6ce0>)\n+\tldr\tr3, [pc, #624]\t@ (284b34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6d00>)\n \tmovs\tr0, r3\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr4, r1, #16\n+\tlsrs\tr4, r2, #16\n \tmovs\tr1, r3\n-\tldr\tr1, [pc, #984]\t@ (284cb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6e84>)\n+\tldr\tr1, [pc, #1016]\t@ (284cd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6ea4>)\n \tmovs\tr0, r3\n-\tstrb\tr4, [r3, r5]\n+\tstrb\tr0, [r5, r5]\n \tmovs\tr6, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tadd\tr2, sp, #72\t@ 0x48\n \tmov\tr0, fp\n \tbl\t286a58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8c24>\n \tb.n\t284632 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe67fe>\n@@ -1301024,17 +1301024,17 @@\n \tb.n\t2849a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6b74>\n \tb.n\t2849d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6ba4>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr2, [r4, #50]\t@ 0x32\n \tmovs\tr2, r4\n-\tb.n\t2848ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6ab8>\n+\tb.n\t2848fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6ac8>\n \tmovs\tr6, r2\n-\tldr\tr0, [pc, #248]\t@ (284aec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6cb8>)\n+\tldr\tr0, [pc, #280]\t@ (284b0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe6cd8>)\n \tmovs\tr0, r3\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::reduceSkimHits4(int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_reduceskimhits.C:115\n@@ -1302058,63 +1302058,63 @@\n \tmovs\tr2, r4\n \tstrh\tr6, [r0, #42]\t@ 0x2a\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tblx\tfp\n+\tblx\tip\n \tmovs\tr0, r3\n-\tmov\tsl, r0\n+\tmov\tsl, r1\n \tmovs\tr0, r3\n-\tsubs\tr1, #114\t@ 0x72\n+\tsubs\tr1, #122\t@ 0x7a\n \tmovs\tr7, r2\n-\tmov\tr0, ip\n+\tmov\tr0, sp\n \tmovs\tr0, r3\n-\tmov\tr2, fp\n+\tmov\tr2, ip\n \tmovs\tr0, r3\n-\tmov\tr4, ip\n+\tmov\tr4, sp\n \tmovs\tr0, r3\n-\tmov\tr2, ip\n+\tmov\tr2, sp\n \tmovs\tr0, r3\n-\tstr\tr0, [sp, #976]\t@ 0x3d0\n+\tstr\tr0, [sp, #1008]\t@ 0x3f0\n \tmovs\tr7, r2\n-\tmov\tr4, r7\n+\tmov\tr4, r8\n \tmovs\tr0, r3\n-\tmov\tr4, r6\n+\tmov\tr4, r7\n \tmovs\tr0, r3\n-\tbics\tr6, r7\n+\tmvns\tr6, r0\n \tmovs\tr0, r3\n-\tadd\tr0, r3\n+\tadd\tr0, r4\n \tmovs\tr0, r3\n-\tadd\tr0, r5\n+\tadd\tr0, r6\n \tmovs\tr0, r3\n-\tmuls\tr0, r6\n+\tmuls\tr0, r7\n \tmovs\tr0, r3\n-\tmuls\tr4, r2\n+\tmuls\tr4, r3\n \tmovs\tr0, r3\n-\torrs\tr4, r7\n+\tmuls\tr4, r0\n \tmovs\tr0, r3\n-\torrs\tr0, r5\n+\torrs\tr0, r6\n \tmovs\tr0, r3\n-\torrs\tr4, r2\n+\torrs\tr4, r3\n \tmovs\tr0, r3\n-\torrs\tr2, r2\n+\torrs\tr2, r3\n \tmovs\tr0, r3\n-\tcmn\tr0, r7\n+\torrs\tr0, r0\n \tmovs\tr0, r3\n-\tcmn\tr4, r4\n+\tcmn\tr4, r5\n \tmovs\tr0, r3\n-\tcmn\tr0, r2\n+\tcmn\tr0, r3\n \tmovs\tr0, r3\n-\torrs\tr4, r6\n+\torrs\tr4, r7\n \tmovs\tr0, r3\n-\torrs\tr2, r3\n+\torrs\tr2, r4\n \tmovs\tr0, r3\n-\tcmn\tr6, r7\n+\torrs\tr6, r0\n \tmovs\tr0, r3\n /usr/include/c++/10/bits/stl_bvector.h:226\n \tldr.w\tr7, [r4, #1868]\t@ 0x74c\n /usr/include/c++/10/bits/stl_bvector.h:227\n \tldr.w\tr2, [r4, #1872]\t@ 0x750\n /usr/include/c++/10/bits/stl_bvector.h:226\n \tsub.w\tr0, r7, r9\n@@ -1302644,23 +1302644,23 @@\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr3, [sp, #204]\t@ 0xcc\n /usr/include/c++/10/bits/char_traits.h:402\n \tb.n\t2853be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe758a>\n \tnop\n \tnop.w\n \t...\n-\tsubs\tr2, #20\n+\tsubs\tr2, #28\n \tmovs\tr0, r3\n-\tcmn\tr0, r2\n+\tcmn\tr0, r3\n \tmovs\tr0, r3\n-\tmcr\t0, 1, r0, cr4, cr6, {0}\n-\tnegs\tr4, r1\n+\tmiaBB\tacc0, r6, r0\n+\tnegs\tr4, r2\n \tmovs\tr0, r3\n-\tstc\t0, cr0, [r4, #88]\t@ 0x58\n-\tsbcs\tr4, r2\n+\tstc\t0, cr0, [ip, #88]\t@ 0x58\n+\tsbcs\tr4, r3\n \tmovs\tr0, r3\n \tldrb\tr2, [r5, #7]\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n ./src/mira/assembly_reduceskimhits.C:383\n \tldr.w\tr0, [pc, #2252]\t@ 285f18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe80e4>\n@@ -1303778,117 +1303778,117 @@\n \tldr\tr2, [r1, r5]\n \tldr\tr1, [r1, r7]\n \tblx\tb700 <__cxa_throw@plt>\n ./src/mira/assembly_reduceskimhits.C:243\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tb.n\t285dba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe7f86>\n \tnop\n-\tsubs\tr5, #28\n+\tsubs\tr5, #36\t@ 0x24\n \tmovs\tr0, r3\n-\tsubs\tr3, #92\t@ 0x5c\n+\tsubs\tr3, #100\t@ 0x64\n \tmovs\tr0, r3\n-\tb.n\t2864a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8674>\n+\tb.n\t2864b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8684>\n \tmovs\tr6, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr2, #212\t@ 0xd4\n+\tsubs\tr2, #220\t@ 0xdc\n+\tmovs\tr0, r3\n+\tsubs\tr2, #208\t@ 0xd0\n \tmovs\tr0, r3\n \tsubs\tr2, #200\t@ 0xc8\n \tmovs\tr0, r3\n \tsubs\tr2, #192\t@ 0xc0\n \tmovs\tr0, r3\n-\tsubs\tr2, #184\t@ 0xb8\n-\tmovs\tr0, r3\n-\tsubs\tr2, #194\t@ 0xc2\n+\tsubs\tr2, #202\t@ 0xca\n \tmovs\tr0, r3\n-\tsubs\tr3, #122\t@ 0x7a\n+\tsubs\tr3, #130\t@ 0x82\n \tmovs\tr0, r3\n-\tsubs\tr2, #152\t@ 0x98\n+\tsubs\tr2, #160\t@ 0xa0\n \tmovs\tr0, r3\n-\tsubs\tr2, #148\t@ 0x94\n-\tmovs\tr0, r3\n-\tsubs\tr2, #126\t@ 0x7e\n+\tsubs\tr2, #156\t@ 0x9c\n \tmovs\tr0, r3\n-\tsubs\tr2, #98\t@ 0x62\n+\tsubs\tr2, #134\t@ 0x86\n \tmovs\tr0, r3\n-\tsubs\tr2, #70\t@ 0x46\n+\tsubs\tr2, #106\t@ 0x6a\n \tmovs\tr0, r3\n \tsubs\tr2, #78\t@ 0x4e\n \tmovs\tr0, r3\n-\tsubs\tr2, #148\t@ 0x94\n-\tmovs\tr0, r3\n-\tsubs\tr2, #126\t@ 0x7e\n+\tsubs\tr2, #86\t@ 0x56\n \tmovs\tr0, r3\n-\tsubs\tr1, #126\t@ 0x7e\n+\tsubs\tr2, #156\t@ 0x9c\n \tmovs\tr0, r3\n-\tsubs\tr1, #136\t@ 0x88\n+\tsubs\tr2, #134\t@ 0x86\n \tmovs\tr0, r3\n-\tsubs\tr1, #106\t@ 0x6a\n+\tsubs\tr1, #134\t@ 0x86\n \tmovs\tr0, r3\n-\tsubs\tr1, #84\t@ 0x54\n+\tsubs\tr1, #144\t@ 0x90\n \tmovs\tr0, r3\n-\tsubs\tr1, #62\t@ 0x3e\n+\tsubs\tr1, #114\t@ 0x72\n \tmovs\tr0, r3\n-\tsubs\tr1, #40\t@ 0x28\n+\tsubs\tr1, #92\t@ 0x5c\n \tmovs\tr0, r3\n-\tsubs\tr1, #36\t@ 0x24\n+\tsubs\tr1, #70\t@ 0x46\n \tmovs\tr0, r3\n-\tsubs\tr1, #8\n+\tsubs\tr1, #48\t@ 0x30\n \tmovs\tr0, r3\n-\tsubs\tr0, #242\t@ 0xf2\n+\tsubs\tr1, #44\t@ 0x2c\n \tmovs\tr0, r3\n-\tsubs\tr0, #220\t@ 0xdc\n+\tsubs\tr1, #16\n \tmovs\tr0, r3\n-\tadds\tr7, #108\t@ 0x6c\n+\tsubs\tr0, #250\t@ 0xfa\n \tmovs\tr0, r3\n-\tsubs\tr0, #100\t@ 0x64\n+\tsubs\tr0, #228\t@ 0xe4\n \tmovs\tr0, r3\n-\tadds\tr7, #240\t@ 0xf0\n+\tadds\tr7, #116\t@ 0x74\n \tmovs\tr0, r3\n \tsubs\tr0, #108\t@ 0x6c\n \tmovs\tr0, r3\n-\tadds\tr7, #180\t@ 0xb4\n+\tadds\tr7, #248\t@ 0xf8\n \tmovs\tr0, r3\n-\tadds\tr7, #156\t@ 0x9c\n+\tsubs\tr0, #116\t@ 0x74\n \tmovs\tr0, r3\n-\tadds\tr7, #132\t@ 0x84\n+\tadds\tr7, #188\t@ 0xbc\n \tmovs\tr0, r3\n-\tadds\tr7, #112\t@ 0x70\n+\tadds\tr7, #164\t@ 0xa4\n \tmovs\tr0, r3\n-\tadds\tr7, #110\t@ 0x6e\n+\tadds\tr7, #140\t@ 0x8c\n \tmovs\tr0, r3\n-\tadds\tr7, #84\t@ 0x54\n+\tadds\tr7, #120\t@ 0x78\n \tmovs\tr0, r3\n-\tadds\tr7, #156\t@ 0x9c\n+\tadds\tr7, #118\t@ 0x76\n \tmovs\tr0, r3\n-\tadds\tr7, #32\n+\tadds\tr7, #92\t@ 0x5c\n \tmovs\tr0, r3\n-\tadds\tr7, #12\n+\tadds\tr7, #164\t@ 0xa4\n \tmovs\tr0, r3\n-\tadds\tr7, #182\t@ 0xb6\n+\tadds\tr7, #40\t@ 0x28\n \tmovs\tr0, r3\n-\tadds\tr7, #238\t@ 0xee\n+\tadds\tr7, #20\n+\tmovs\tr0, r3\n+\tadds\tr7, #190\t@ 0xbe\n+\tmovs\tr0, r3\n+\tadds\tr7, #246\t@ 0xf6\n \tmovs\tr0, r3\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsls\tr6, r5, #2\n \tmovs\tr6, r2\n-\tcmp\tr5, #170\t@ 0xaa\n+\tcmp\tr5, #182\t@ 0xb6\n \tmovs\tr6, r2\n \tlsls\tr6, r3, #2\n \tmovs\tr6, r2\n-\tcmp\tr5, #154\t@ 0x9a\n+\tcmp\tr5, #166\t@ 0xa6\n \tmovs\tr6, r2\n-\tadds\tr7, #146\t@ 0x92\n+\tadds\tr7, #154\t@ 0x9a\n \tmovs\tr0, r3\n-\tadds\tr7, #170\t@ 0xaa\n+\tadds\tr7, #178\t@ 0xb2\n \tmovs\tr0, r3\n-\tadds\tr7, #110\t@ 0x6e\n+\tadds\tr7, #118\t@ 0x76\n \tmovs\tr0, r3\n \tlsrs\tr4, r5, #1\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #22\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #7\n \tmovs\tr0, r0\n@@ -1304103,31 +1304103,31 @@\n \tpop\t{r4, r5, r6, r7, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \tldr\tr2, [r4, #116]\t@ 0x74\n \tmovs\tr2, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tble.n\t286134 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8300>\n+\tble.n\t286144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8310>\n \tmovs\tr7, r2\n-\tble.n\t286254 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8420>\n+\tble.n\t286264 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8430>\n \tmovs\tr7, r2\n-\tble.n\t286228 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe83f4>\n+\tble.n\t286238 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8404>\n \tmovs\tr7, r2\n-\tble.n\t2861fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe83c8>\n+\tble.n\t28620c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe83d8>\n \tmovs\tr7, r2\n-\tstmia\tr7!, {r2, r5, r6, r7}\n+\tstmia\tr7!, {r2, r3, r5, r6, r7}\n \tmovs\tr6, r2\n-\tstmia\tr7!, {r2, r4, r6, r7}\n+\tstmia\tr7!, {r2, r3, r4, r6, r7}\n \tmovs\tr6, r2\n-\tstmia\tr7!, {r2, r3, r4, r5, r6}\n+\tstmia\tr7!, {r2, r7}\n \tmovs\tr6, r2\n-\tstmia\tr7!, {r2, r3, r5, r6}\n+\tstmia\tr7!, {r2, r4, r5, r6}\n \tmovs\tr6, r2\n-\tstmia\tr7!, {r2, r4, r7}\n+\tstmia\tr7!, {r2, r3, r4, r7}\n \tmovs\tr6, r2\n \tldr\tr0, [r1, #96]\t@ 0x60\n \tmovs\tr2, r4\n std::vector >::reserve(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:69\n \tmovw\tr3, #21845\t@ 0x5555\n \tmovt\tr3, #1365\t@ 0x555\n@@ -1304205,15 +1304205,15 @@\n \tldr\tr0, [r5, #8]\n \tsubs\tr1, r0, r6\n \tb.n\t286210 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe83dc>\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #4]\t@ (28622c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe83f8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrh\tr6, [r2, #16]\n+\tstrh\tr2, [r4, #16]\n \tmovs\tr6, r2\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, skimedges_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr2, #43691\t@ 0xaaab\n@@ -1304322,15 +1304322,15 @@\n \tmovw\tr9, #65528\t@ 0xfff8\n \tmovt\tr9, #32767\t@ 0x7fff\n \tb.n\t2862f2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe84be>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (286314 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe84e0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsrs\tr6, r2, #4\n+\tlsrs\tr2, r4, #4\n \tmovs\tr6, r2\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t2866e6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe88b2>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1304790,15 +1304790,15 @@\n \tmovw\tr6, #65528\t@ 0xfff8\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t2866f6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe88c2>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (28676c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8938>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tcmp\tr5, #234\t@ 0xea\n+\tcmp\tr5, #246\t@ 0xf6\n \tmovs\tr6, r2\n void std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > >::_M_realloc_insert<__gnu_cxx::__normal_iterator > > const&>(__gnu_cxx::__normal_iterator<__gnu_cxx::__normal_iterator > >*, std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > > >, __gnu_cxx::__normal_iterator > > const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #3758096384\t@ 0xe0000000\n@@ -1304948,15 +1304948,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t2867e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe89b0>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2868cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8a98>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tlsls\tr0, r4, #13\n+\tlsls\tr4, r5, #13\n \tmovs\tr6, r2\n std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcbz\tr1, 286912 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8ade>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n@@ -1305123,15 +1305123,15 @@\n \tmovt\tr9, #32767\t@ 0x7fff\n \tb.n\t286a28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8bf4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (286a54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8c20>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcmp\tr3, #4\n+\tcmp\tr3, #16\n \tmovs\tr6, r2\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, unsigned long long&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr2, #4026531840\t@ 0xf0000000\n@@ -1305238,15 +1305238,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t286b08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8cd4>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (286b28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe8cf4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tlsls\tr4, r0, #4\n+\tlsls\tr0, r2, #4\n \tmovs\tr6, r2\n void __gnu_parallel::parallel_sort_mwms > >, bool (*)(skimedges_t const&, skimedges_t const&)>(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, bool (*)(skimedges_t const&, skimedges_t const&), unsigned short):\n /usr/include/c++/10/parallel/multiway_mergesort.h:395\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tsubs\tr1, r1, r0\n /usr/include/c++/10/parallel/multiway_mergesort.h:407\n@@ -1306978,15 +1306978,15 @@\n \tstmia.w\tr4, {r0, r1, r2, r3}\n \tb.n\t28771a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe98e6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (28793c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe9b08>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\t\t\t@ instruction: 0xf2f00015\n+\t\t\t@ instruction: 0xf2fc0015\n void std::__push_heap<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse > >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:138\n \tsubs\tr4, r1, #1\n /usr/include/c++/10/bits/stl_heap.h:134\n \tmov\tr7, r0\n@@ -1328820,21 +1328820,21 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tstr\tr4, [sp, #112]\t@ 0x70\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr1, {r1, r3, r6}\n+\tldmia\tr1, {r1, r4, r6}\n \tmovs\tr6, r2\n-\tldrb\tr4, [r6, #16]\n+\tldrb\tr4, [r7, #16]\n \tmovs\tr7, r2\n-\tcbz\tr2, 293cb2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5e7e>\n+\tcbz\tr6, 293cb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5e80>\n \tmovs\tr5, r2\n-\tcbz\tr6, 293ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5e6c>\n+\tcbz\tr2, 293ca4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5e70>\n \tmovs\tr5, r2\n Assembly::ma_takeall(Assembly&, int, int):\n ./src/mira/assembly_swalign.C:625\n \tmovs\tr0, #1\n \tbx\tlr\n Assembly::ma_needRRFlag(Assembly&, int, int):\n /usr/include/c++/10/bits/stl_bvector.h:911\n@@ -1329716,25 +1329716,25 @@\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r5, #52]\t@ 0x34\n \tmovs\tr1, r4\n \tldrh\tr4, [r2, #48]\t@ 0x30\n \tmovs\tr1, r4\n-\tstrb\tr4, [r4, r3]\n+\tstrb\tr4, [r5, r3]\n \tmovs\tr7, r2\n-\tstrb\tr6, [r3, r3]\n+\tstrb\tr6, [r4, r3]\n \tmovs\tr7, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr4, [r5, r3]\n+\tstrb\tr4, [r6, r3]\n \tmovs\tr7, r2\n-\tstrb\tr2, [r0, r2]\n+\tstrb\tr2, [r1, r2]\n \tmovs\tr7, r2\n Assembly::computeSWAlign(std::__cxx11::list >&, unsigned int, unsigned int, int, signed char, std::vector >&, int):\n ./src/mira/assembly_swalign.C:455\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr4, [pc, #1776]\t@ 294978 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6b44>\n \tldr.w\tr0, [pc, #1776]\t@ 29497c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6b48>\n@@ -1330596,33 +1330596,33 @@\n \tmovs\tr0, r0\n \tldrh\tr6, [r2, #36]\t@ 0x24\n \tmovs\tr1, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldrh\tr0, [r5, #20]\n \tmovs\tr1, r4\n-\tldr\tr7, [pc, #808]\t@ (294cb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6e84>)\n+\tldr\tr7, [pc, #840]\t@ (294cd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6ea4>)\n \tmovs\tr7, r2\n-\tldr\tr7, [pc, #848]\t@ (294ce4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6eb0>)\n+\tldr\tr7, [pc, #880]\t@ (294d04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6ed0>)\n \tmovs\tr7, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #944]\t@ (294d54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6f20>)\n+\tldr\tr6, [pc, #976]\t@ (294d74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6f40>)\n \tmovs\tr7, r2\n-\tldr\tr6, [pc, #992]\t@ (294d88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6f54>)\n+\tldr\tr7, [pc, #0]\t@ (2949a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6b74>)\n \tmovs\tr7, r2\n-\tstr\tr4, [sp, #784]\t@ 0x310\n+\tstr\tr4, [sp, #816]\t@ 0x330\n \tmovs\tr6, r2\n-\tstr\tr4, [sp, #704]\t@ 0x2c0\n+\tstr\tr4, [sp, #736]\t@ 0x2e0\n \tmovs\tr6, r2\n-\tldr\tr5, [pc, #872]\t@ (294d1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6ee8>)\n+\tldr\tr5, [pc, #904]\t@ (294d3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6f08>)\n \tmovs\tr7, r2\n Assembly::ma_needSRMrOrTwoCRMr(Assembly&, int, int):\n ./src/mira/assembly_swalign.C:649\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r1\n \tldr\tr1, [pc, #384]\t@ (294b3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6d08>)\n \tldr\tr3, [pc, #384]\t@ (294b40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6d0c>)\n@@ -1330831,19 +1330831,19 @@\n \tmovs\tr0, r0\n \tstrh\tr6, [r3, #42]\t@ 0x2a\n \tmovs\tr1, r4\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n \tstrh\tr6, [r0, #40]\t@ 0x28\n \tmovs\tr1, r4\n-\tldr\tr2, [pc, #464]\t@ (294d2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6ef8>)\n+\tldr\tr2, [pc, #512]\t@ (294d5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6f28>)\n \tmovs\tr5, r2\n-\tldr\tr2, [pc, #448]\t@ (294d20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6eec>)\n+\tldr\tr2, [pc, #496]\t@ (294d50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf6f1c>)\n \tmovs\tr5, r2\n-\tstr\tr4, [r5, #8]\n+\tstr\tr4, [r6, #8]\n \tmovs\tr7, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1331055,19 +1331055,19 @@\n \tmovs\tr1, r4\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n \tstrh\tr0, [r0, #28]\n \tmovs\tr1, r4\n \tstrh\tr4, [r3, #26]\n \tmovs\tr1, r4\n-\tldr\tr0, [pc, #808]\t@ (29502c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf71f8>)\n+\tldr\tr0, [pc, #856]\t@ (29505c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7228>)\n \tmovs\tr5, r2\n-\tldr\tr0, [pc, #792]\t@ (295020 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf71ec>)\n+\tldr\tr0, [pc, #840]\t@ (295050 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf721c>)\n \tmovs\tr5, r2\n-\tldrsh\tr2, [r0, r4]\n+\tldrsh\tr2, [r1, r4]\n \tmovs\tr7, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1332629,29 +1332629,29 @@\n \tblx\tb700 <__cxa_throw@plt>\n \tstrh\tr0, [r7, #16]\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr6, [r3, #16]\n \tmovs\tr1, r4\n-\tldr\tr1, [pc, #768]\t@ (295bd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7da4>)\n+\tldr\tr1, [pc, #800]\t@ (295bf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7dc4>)\n \tmovs\tr7, r2\n-\tldr\tr1, [pc, #832]\t@ (295c1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7de8>)\n+\tldr\tr1, [pc, #864]\t@ (295c3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7e08>)\n \tmovs\tr7, r2\n-\tldr\tr2, [pc, #48]\t@ (295910 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7adc>)\n+\tldr\tr2, [pc, #80]\t@ (295930 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7afc>)\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #768]\t@ (295be8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7db4>)\n+\tldr\tr1, [pc, #800]\t@ (295c08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7dd4>)\n \tmovs\tr7, r2\n-\tstmia\tr4!, {r1, r2, r6}\n+\tstmia\tr4!, {r1, r2, r3, r6}\n \tmovs\tr0, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tlsls\tr2, r1, #16\n+\tlsls\tr2, r2, #16\n \tmovs\tr0, r3\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n@@ -1332661,33 +1332661,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r1, #8\n \tmovs\tr0, r0\n \tldrb\tr4, [r2, #13]\n \tmovs\tr1, r4\n-\tmvns\tr6, r1\n+\tmvns\tr6, r2\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tasrs\tr0, r3\n+\tasrs\tr0, r4\n \tmovs\tr7, r2\n-\tlsrs\tr6, r7\n+\tasrs\tr6, r0\n \tmovs\tr7, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr4, r1\n+\tasrs\tr4, r2\n \tmovs\tr7, r2\n-\tlsls\tr6, r3\n+\tlsls\tr6, r4\n \tmovs\tr7, r2\n-\tlsrs\tr6, r0\n+\tlsrs\tr6, r1\n \tmovs\tr7, r2\n-\tands\tr0, r7\n+\teors\tr0, r0\n \tmovs\tr7, r2\n ./src/mira/assembly_swalign.C:1785\n \tldr\tr2, [sp, #88]\t@ 0x58\n \tldr\tr1, [sp, #92]\t@ 0x5c\n \tmov\tr3, r2\n \torrs\tr3, r1\n \tuxtb\tr6, r3\n@@ -1333213,17 +1333213,17 @@\n \tb.n\t295d0a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf7ed6>\n \tlsrs\tr4, r2, #1\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #14\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #13\n \tmovs\tr0, r0\n-\tsubs\tr6, #124\t@ 0x7c\n+\tsubs\tr6, #132\t@ 0x84\n \tmovs\tr7, r2\n-\tsubs\tr5, #222\t@ 0xde\n+\tsubs\tr5, #230\t@ 0xe6\n \tmovs\tr7, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::checkADSForRepeatMismatches(AlignedDualSeq&):\n ./src/mira/assembly_swalign.C:1611\n@@ -1333633,17 +1333633,17 @@\n \tmovs\tr0, r0\n \tstrb\tr2, [r3, #5]\n \tmovs\tr1, r4\n \tstrb\tr6, [r1, #5]\n \tmovs\tr1, r4\n \tldr\tr6, [r3, #124]\t@ 0x7c\n \tmovs\tr1, r4\n-\tsubs\tr1, #86\t@ 0x56\n+\tsubs\tr1, #94\t@ 0x5e\n \tmovs\tr7, r2\n-\tsubs\tr1, #124\t@ 0x7c\n+\tsubs\tr1, #132\t@ 0x84\n \tmovs\tr7, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Assembly::priv_laffhelper(std::__cxx11::basic_string, std::allocator > const&, ProgressIndicator&, unsigned long long&, unsigned long long&):\n ./src/mira/assembly_swalign.C:1204\n@@ -1334051,15 +1334051,15 @@\n \tmovs\tr1, r4\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #336\t@ (adr r3, 296574 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf8740>)\n+\tadd\tr3, pc, #368\t@ (adr r3, 296594 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf8760>)\n \tmovs\tr6, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n ./src/mira/assembly_swalign.C:1290\n \tldr\tr7, [sp, #16]\n \tldr\tr6, [sp, #20]\n \tldr\tr1, [sp, #24]\n@@ -1334428,31 +1334428,31 @@\n \tblx\tb700 <__cxa_throw@plt>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr6, [r5, r2]\n+\tstrh\tr6, [r6, r2]\n \tmovs\tr7, r2\n-\tldrh\tr0, [r6, #16]\n+\tldrh\tr4, [r7, #16]\n \tmovs\tr5, r2\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldr\tr6, [r2, #20]\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr6, #170\t@ 0xaa\n+\tcmp\tr6, #182\t@ 0xb6\n \tmovs\tr5, r2\n-\tcmp\tr6, #166\t@ 0xa6\n+\tcmp\tr6, #178\t@ 0xb2\n \tmovs\tr5, r2\n-\tadd\tsl, ip\n+\tadd\tsl, sp\n \tmovs\tr7, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1334855,33 +1334855,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr5, #38\t@ 0x26\n+\tcmp\tr5, #50\t@ 0x32\n \tmovs\tr5, r2\n-\tcmp\tr5, #34\t@ 0x22\n+\tcmp\tr5, #46\t@ 0x2e\n \tmovs\tr5, r2\n-\tmuls\tr6, r3\n+\tmuls\tr6, r4\n \tmovs\tr7, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr0, [r0, #52]\t@ 0x34\n+\tstrh\tr4, [r1, #52]\t@ 0x34\n \tmovs\tr5, r2\n-\tcmp\tr3, #102\t@ 0x66\n+\tcmp\tr3, #114\t@ 0x72\n \tmovs\tr5, r2\n-\tcmp\tr3, #98\t@ 0x62\n+\tcmp\tr3, #110\t@ 0x6e\n \tmovs\tr5, r2\n-\tsbcs\tr6, r3\n+\tsbcs\tr6, r4\n \tmovs\tr7, r2\n ./src/mira/../../src/mira/readgrouplib.H:270\n \tadd\tr5, sp, #120\t@ 0x78\n \tmov\tr0, r5\n \tbl\t293cfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5ec8>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #1364]\t@ 296fc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf9194>\n@@ -1335565,61 +1335565,61 @@\n \tb.n\t296f4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf9118>\n \tb.n\t296ec4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf9090>\n \tb.n\t296ed4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf90a0>\n \tb.n\t296eb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf9080>\n \tb.n\t296ed4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf90a0>\n \tb.n\t296eb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf9080>\n \tb.n\t296ec4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf9090>\n-\tcmp\tr2, #176\t@ 0xb0\n+\tcmp\tr2, #188\t@ 0xbc\n \tmovs\tr5, r2\n-\tcmp\tr2, #162\t@ 0xa2\n+\tcmp\tr2, #174\t@ 0xae\n \tmovs\tr5, r2\n-\tstrh\tr6, [r5, r1]\n+\tstrh\tr6, [r6, r1]\n \tmovs\tr7, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr1, #210\t@ 0xd2\n+\tcmp\tr1, #222\t@ 0xde\n \tmovs\tr5, r2\n-\tcmp\tr1, #204\t@ 0xcc\n+\tcmp\tr1, #216\t@ 0xd8\n \tmovs\tr5, r2\n-\tands\tr6, r0\n+\tands\tr6, r1\n \tmovs\tr7, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr1, #88\t@ 0x58\n+\tcmp\tr1, #100\t@ 0x64\n \tmovs\tr5, r2\n-\tcmp\tr1, #74\t@ 0x4a\n+\tcmp\tr1, #86\t@ 0x56\n \tmovs\tr5, r2\n-\tstr\tr0, [r3, r4]\n+\tstr\tr0, [r4, r4]\n \tmovs\tr7, r2\n-\tcmp\tr0, #128\t@ 0x80\n+\tcmp\tr0, #140\t@ 0x8c\n \tmovs\tr5, r2\n-\tcmp\tr0, #124\t@ 0x7c\n+\tcmp\tr0, #136\t@ 0x88\n \tmovs\tr5, r2\n-\tsubs\tr6, #184\t@ 0xb8\n+\tsubs\tr6, #192\t@ 0xc0\n \tmovs\tr7, r2\n-\tstmia\tr1!, {r1, r4, r5, r6}\n+\tstmia\tr1!, {r1, r3, r4, r5, r6}\n \tmovs\tr5, r2\n-\tstmia\tr1!, {r1, r2, r5, r6}\n+\tstmia\tr1!, {r1, r2, r3, r5, r6}\n \tmovs\tr5, r2\n \tlsls\tr0, r6, #31\n \tmovs\tr0, r0\n-\tcmp\tr4, #208\t@ 0xd0\n+\tcmp\tr4, #216\t@ 0xd8\n \tmovs\tr7, r2\n-\tcmp\tr4, #218\t@ 0xda\n+\tcmp\tr4, #226\t@ 0xe2\n \tmovs\tr7, r2\n-\tcmp\tr5, #48\t@ 0x30\n+\tcmp\tr5, #56\t@ 0x38\n \tmovs\tr7, r2\n-\tcmp\tr5, #90\t@ 0x5a\n+\tcmp\tr5, #98\t@ 0x62\n \tmovs\tr7, r2\n-\tcmp\tr4, #64\t@ 0x40\n+\tcmp\tr4, #72\t@ 0x48\n \tmovs\tr7, r2\n Assembly::clusterUnassembledReads(std::vector >&, std::vector >, std::allocator > > >&, std::vector > const&):\n ./src/mira/assembly_swalign.C:1372\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r0\n \tldr\tr6, [pc, #988]\t@ (29740c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf95d8>)\n \tvpush\t{d8-d11}\n@@ -1336100,31 +1336100,31 @@\n \tmovs\tr0, r0\n \tldrsh\tr0, [r5, r4]\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsh\tr0, [r4, r4]\n \tmovs\tr1, r4\n-\tstr\tr3, [sp, #1000]\t@ 0x3e8\n+\tstr\tr4, [sp, #8]\n \tmovs\tr6, r2\n-\tmov\tr8, sp\n+\tmov\tr8, lr\n \tmovs\tr7, r2\n-\tldrb\tr6, [r5, #25]\n+\tldrb\tr2, [r7, #25]\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr0, [r5, #21]\n+\tldrb\tr4, [r6, #21]\n \tmovs\tr5, r2\n-\tstr\tr2, [sp, #504]\t@ 0x1f8\n+\tstr\tr2, [sp, #536]\t@ 0x218\n \tmovs\tr6, r2\n-\tcmp\tr0, sp\n+\tcmp\tr0, lr\n \tmovs\tr7, r2\n-\tldrb\tr6, [r5, #19]\n+\tldrb\tr2, [r7, #19]\n \tmovs\tr5, r2\n-\tldrb\tr6, [r3, #18]\n+\tldrb\tr2, [r5, #18]\n \tmovs\tr5, r2\n \tldrb\tr0, [r0, r2]\n \tmovs\tr1, r4\n \tldrb\tr2, [r3, r1]\n \tmovs\tr1, r4\n ./src/mira/assembly_swalign.C:1399\n \tldr\tr3, [sp, #24]\n@@ -1338305,75 +1338305,75 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tstr\tr2, [r0, #28]\n+\tstr\tr2, [r1, #28]\n \tmovs\tr6, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr6, r4, #7\n+\tsubs\tr6, r5, #7\n \tmovs\tr7, r2\n-\tsubs\tr6, r4, #7\n+\tsubs\tr6, r5, #7\n \tmovs\tr7, r2\n-\tsubs\tr0, r4, #7\n+\tsubs\tr0, r5, #7\n \tmovs\tr7, r2\n-\tsubs\tr2, r3, #7\n+\tsubs\tr2, r4, #7\n \tmovs\tr7, r2\n-\tsubs\tr4, r2, #7\n+\tsubs\tr4, r3, #7\n \tmovs\tr7, r2\n-\tsubs\tr6, r2, #7\n+\tsubs\tr6, r3, #7\n \tmovs\tr7, r2\n-\tsubs\tr0, r0, #2\n+\tsubs\tr0, r1, #2\n \tmovs\tr7, r2\n-\tsubs\tr6, r0, #2\n+\tsubs\tr6, r1, #2\n \tmovs\tr7, r2\n-\tsubs\tr2, r7, #1\n+\tsubs\tr2, r0, #2\n \tmovs\tr7, r2\n-\tb.n\t2982fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfa4c8>\n+\tb.n\t298314 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfa4e0>\n \tmovs\tr4, r2\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldr\tr6, [pc, #888]\t@ (298918 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfaae4>)\n \tmovs\tr1, r4\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #376\t@ 0x178\n+\tadd\tr4, sp, #408\t@ 0x198\n \tmovs\tr5, r2\n-\tadd\tr4, sp, #328\t@ 0x148\n+\tadd\tr4, sp, #360\t@ 0x168\n \tmovs\tr5, r2\n \tlsls\tr0, r6, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldrh\tr2, [r5, r1]\n+\tldrh\tr2, [r6, r1]\n \tmovs\tr6, r2\n-\tasrs\tr2, r1, #5\n+\tasrs\tr6, r2, #5\n \tmovs\tr5, r2\n-\tasrs\tr6, r0, #5\n+\tasrs\tr2, r2, #5\n \tmovs\tr5, r2\n-\tmovs\tr7, #130\t@ 0x82\n+\tmovs\tr7, #138\t@ 0x8a\n \tmovs\tr7, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #480]\t@ 0x1e0\n+\tstr\tr6, [sp, #528]\t@ 0x210\n \tmovs\tr5, r2\n-\tasrs\tr4, r3, #28\n+\tasrs\tr4, r4, #28\n \tmovs\tr7, r2\n-\tldr\tr4, [r0, r3]\n+\tldr\tr4, [r1, r3]\n \tmovs\tr6, r2\n ./src/mira/../../src/mira/readpool.H:216\n \tmov\tr1, r3\n \tmov\tr0, r8\n \tbl\t299f8 \n ./src/mira/assembly_swalign.C:210\n \tldrh.w\tr1, [fp]\n@@ -1339186,41 +1339186,41 @@\n \tmov\tr0, r6\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t298b82 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfad4e>\n \tb.n\t298c24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfadf0>\n \tnop\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n-\tasrs\tr6, r5, #15\n+\tasrs\tr6, r6, #15\n \tmovs\tr7, r2\n-\tasrs\tr2, r4, #13\n+\tasrs\tr2, r5, #13\n \tmovs\tr7, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstrb\tr6, [r1, r0]\n+\tstrb\tr6, [r2, r0]\n \tmovs\tr6, r2\n-\tasrs\tr2, r4, #8\n+\tasrs\tr2, r5, #8\n \tmovs\tr7, r2\n-\tasrs\tr4, r4, #7\n+\tasrs\tr4, r5, #7\n \tmovs\tr7, r2\n-\tasrs\tr4, r2, #7\n+\tasrs\tr4, r3, #7\n \tmovs\tr7, r2\n-\tasrs\tr6, r5, #5\n+\tasrs\tr6, r6, #5\n \tmovs\tr7, r2\n-\tasrs\tr4, r5, #3\n+\tasrs\tr4, r6, #3\n \tmovs\tr7, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr2, r6, #5\n+\tasrs\tr2, r7, #5\n \tmovs\tr7, r2\n-\tasrs\tr6, r0, #2\n+\tasrs\tr6, r1, #2\n \tmovs\tr7, r2\n-\tasrs\tr6, r1, #4\n+\tasrs\tr6, r2, #4\n \tmovs\tr7, r2\n Assembly::makeAlignments(bool (*)(Assembly&, int, int), bool, bool, int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_swalign.C:658\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #3184]\t@ 2998e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbab0>\n \tldr.w\tr4, [pc, #3184]\t@ 2998e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbab4>\n \tadd\tr5, pc\n@@ -1340857,59 +1340857,59 @@\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tcmn\tr2, r0\n \tmovs\tr1, r4\n-\tasrs\tr4, r6, #2\n+\tasrs\tr4, r7, #2\n \tmovs\tr7, r2\n-\tasrs\tr0, r2, #2\n+\tasrs\tr0, r3, #2\n \tmovs\tr7, r2\n-\tstr\tr4, [r7, r2]\n+\tstr\tr4, [r0, r3]\n \tmovs\tr6, r2\n-\tlsrs\tr6, r7, #31\n+\tasrs\tr6, r0, #32\n \tmovs\tr7, r2\n-\tstr\tr2, [r4, r0]\n+\tstr\tr2, [r5, r0]\n \tmovs\tr6, r2\n-\tlsrs\tr2, r0, #30\n+\tlsrs\tr2, r1, #30\n \tmovs\tr7, r2\n-\tldr\tr7, [pc, #568]\t@ (299b48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbd14>)\n+\tldr\tr7, [pc, #600]\t@ (299b68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbd34>)\n \tmovs\tr6, r2\n-\tlsrs\tr0, r0, #28\n+\tlsrs\tr0, r1, #28\n \tmovs\tr7, r2\n-\tldr\tr7, [pc, #0]\t@ (299918 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbae4>)\n+\tldr\tr7, [pc, #32]\t@ (299938 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbb04>)\n \tmovs\tr6, r2\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tlsrs\tr2, r4, #9\n+\tlsrs\tr2, r5, #9\n \tmovs\tr7, r2\n-\tlsrs\tr6, r7, #7\n+\tlsrs\tr6, r0, #8\n \tmovs\tr7, r2\n-\tldr\tr1, [pc, #304]\t@ (299a60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbc2c>)\n+\tldr\tr1, [pc, #336]\t@ (299a80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbc4c>)\n \tmovs\tr6, r2\n-\tpop\t{r2, r4, r5, r6}\n+\tpop\t{r2, r3, r4, r5, r6}\n \tmovs\tr5, r2\n-\tldr\tr1, [pc, #208]\t@ (299a08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbbd4>)\n+\tldr\tr1, [pc, #240]\t@ (299a28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfbbf4>)\n \tmovs\tr6, r2\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tadds\tr7, #216\t@ 0xd8\n \tmovs\tr1, r4\n-\tlsls\tr6, r6, #20\n+\tlsls\tr6, r7, #20\n \tmovs\tr7, r2\n-\tlsls\tr4, r0, #21\n+\tlsls\tr4, r1, #21\n \tmovs\tr7, r2\n-\tcmp\tr6, r8\n+\tcmp\tr6, r9\n \tmovs\tr6, r2\n ./src/mira/assembly_swalign.C:687\n \tldr.w\tr1, [pc, #2152]\t@ 29a1bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfc388>\n \tadd\tr0, sp, #360\t@ 0x168\n \tmov\tr8, r0\n \tstr\tr0, [sp, #32]\n \tadd\tr1, pc\n@@ -1342016,31 +1342016,31 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t299e80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfc04c>\n \tb.n\t29a19e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfc36a>\n \tb.n\t29a142 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfc30e>\n \tb.n\t29a152 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfc31e>\n \tnop\n-\tlsls\tr6, r6, #16\n+\tlsls\tr6, r7, #16\n \tmovs\tr7, r2\n-\tlsls\tr6, r6, #16\n+\tlsls\tr6, r7, #16\n \tmovs\tr7, r2\n-\tadd\tr2, r8\n+\tadd\tr2, r9\n \tmovs\tr6, r2\n-\tlsls\tr4, r1, #14\n+\tlsls\tr4, r2, #14\n \tmovs\tr7, r2\n-\tlsls\tr4, r6, #13\n+\tlsls\tr4, r7, #13\n \tmovs\tr7, r2\n-\tbics\tr0, r3\n+\tbics\tr0, r4\n \tmovs\tr6, r2\n-\tlsls\tr6, r1, #11\n+\tlsls\tr6, r2, #11\n \tmovs\tr7, r2\n-\tcmn\tr2, r7\n+\torrs\tr2, r0\n \tmovs\tr6, r2\n-\tmrc2\t0, 5, r0, cr14, cr6, {0}\n+\tmcr2\t0, 6, r0, cr6, cr6, {0}\n Assembly::rnpskmbs_helper(std::__cxx11::basic_string, std::allocator > const&, int, signed char):\n ./src/mira/assembly_swalign.C:2221\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tldr.w\tr2, [pc, #1592]\t@ 29a820 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfc9ec>\n \tvpush\t{d8-d11}\n \tsub.w\tsp, sp, #780\t@ 0x30c\n@@ -1342861,36 +1342861,36 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tsubs\tr3, #16\n+\tsubs\tr3, #24\n \tmovs\tr6, r2\n-\tsubs\tr3, #2\n+\tsubs\tr3, #10\n \tmovs\tr6, r2\n-\tsmmlsr\tr0, r0, r6, r0\n-\tadd\tr5, pc, #416\t@ (adr r5, 29a9e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcbb4>)\n+\tsmmlsr\tr0, r8, r6, r0\n+\tadd\tr5, pc, #448\t@ (adr r5, 29aa08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcbd4>)\n \tmovs\tr5, r2\n-\tsubs\tr2, #212\t@ 0xd4\n+\tsubs\tr2, #220\t@ 0xdc\n \tmovs\tr6, r2\n-\tldrh\tr0, [r6, #32]\n+\tldrh\tr0, [r7, #32]\n \tmovs\tr5, r2\n-\tstr\tr2, [r6, #8]\n+\tstr\tr2, [r7, #8]\n \tmovs\tr6, r2\n-\tasrs\tr2, r5, #11\n+\tasrs\tr2, r6, #11\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #96]\t@ (29a8c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfca8c>)\n+\tldr\tr2, [pc, #144]\t@ (29a8f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcabc>)\n \tmovs\tr5, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0x478a\n+\t\t\t@ instruction: 0x4796\n \tmovs\tr5, r2\n /usr/include/c++/10/fstream:332\n \tvmov\tr0, s22\n \tmovs\tr2, #17\n \tblx\tbc58 >::open(char const*, std::_Ios_Openmode)@plt>\n /usr/include/c++/10/fstream:963\n \tldr\tr1, [sp, #56]\t@ 0x38\n@@ -1343266,27 +1343266,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xeb880014\n-\t\t\t@ instruction: 0xeb840014\n-\tlsls\tr6, r7, #6\n+\t\t\t@ instruction: 0xeb940014\n+\t\t\t@ instruction: 0xeb900014\n+\tlsls\tr6, r0, #7\n \tmovs\tr7, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n+\teors.w\tr0, r6, r4, lsr #32\n \teor.w\tr0, sl, r4, lsr #32\n-\torns\tr0, lr, r4, lsr #32\n-\tasrs\tr4, r1, #9\n+\tasrs\tr4, r2, #9\n \tmovs\tr7, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n ./src/mira/../../src/util/progressindic.H:93\n \tldr\tr1, [r6, #8]\n \tmov\tr0, r6\n \tbl\t293b40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5d0c>\n@@ -1344122,62 +1344122,62 @@\n /usr/include/c++/10/bits/stl_list.h:946\n \tldr\tr3, [r0, #0]\n \tb.w\t29a73e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfc90a>\n \tnop\n \t...\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf33e0016\n-\t\t\t@ instruction: 0xf3380016\n-\t\t\t@ instruction: 0xf3320016\n+\tsbfx\tr0, r6, #0, #23\n+\tsbfx\tr0, r0, #0, #23\n+\t\t\t@ instruction: 0xf33a0016\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tmovs\tr1, #228\t@ 0xe4\n \tmovs\tr1, r4\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t29afa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd174>\n+\tb.n\t29afc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd18c>\n \tmovs\tr4, r2\n-\tb.n\t29afa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd170>\n+\tb.n\t29afbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd188>\n \tmovs\tr4, r2\n-\tldc2l\t0, cr0, [r2], #88\t@ 0x58\n+\tldc2l\t0, cr0, [sl], #88\t@ 0x58\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tb.n\t29adbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcf88>\n+\tb.n\t29add4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcfa0>\n \tmovs\tr4, r2\n-\tb.n\t29ada8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcf74>\n+\tb.n\t29adc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfcf8c>\n \tmovs\tr4, r2\n-\tlsrs\tr4, r7, #21\n+\tlsrs\tr4, r0, #22\n \tmovs\tr7, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tldrb\tr0, [r5, #23]\n+\tldrb\tr0, [r6, #23]\n \tmovs\tr5, r2\n-\tldrb\tr4, [r3, #23]\n+\tldrb\tr4, [r4, #23]\n \tmovs\tr5, r2\n \tlsls\tr0, r6, #31\n \tmovs\tr0, r0\n-\tb.n\t29b9e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdbac>\n+\tb.n\t29b9f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdbc4>\n \tmovs\tr4, r2\n-\tb.n\t29b9dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdba8>\n+\tb.n\t29b9f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdbc0>\n \tmovs\tr4, r2\n-\tldr??.w\tr0, [r4, #22]\n-\tldc\t0, cr0, [lr], #88\t@ 0x58\n+\tldr??.w\tr0, [ip, #22]\n+\tstcl\t0, cr0, [r6], {22}\n ./src/mira/assembly_swalign.C:2319\n \tldr\tr1, [sp, #64]\t@ 0x40\n \tldr\tr0, [sp, #56]\t@ 0x38\n \tblx\tb2f8 \n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #1020]\t@ (29b678 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd844>)\n \tmovs\tr2, #6\n@@ -1344695,49 +1344695,49 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t29b64e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd81a>\n \tb.n\t29b64e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd81a>\n \t...\n-\tstc\t0, cr0, [r2], #-88\t@ 0xffffffa8\n-\tb.n\t29bae0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdcac>\n+\tstc\t0, cr0, [sl], #-88\t@ 0xffffffa8\n+\tb.n\t29baf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdcc4>\n \tmovs\tr4, r2\n-\tb.n\t29badc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdca8>\n+\tb.n\t29baf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdcc0>\n \tmovs\tr4, r2\n-\tstr??.w\tr0, [r6, r6, lsl #1]\n+\tstr??.w\tr0, [lr, r6, lsl #1]\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t29b90c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdad8>\n+\tb.n\t29b924 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdaf0>\n \tmovs\tr4, r2\n-\tb.n\t29b8f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdac4>\n+\tb.n\t29b910 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdadc>\n \tmovs\tr4, r2\n-\tlsrs\tr4, r6, #3\n+\tlsrs\tr4, r7, #3\n \tmovs\tr7, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tsubs\tr1, #152\t@ 0x98\n+\tsubs\tr1, #164\t@ 0xa4\n \tmovs\tr5, r2\n-\tstmdb\tlr!, {r1, r2, r4}\n-\tstrd\tr0, r0, [lr, #-88]!\t@ 0x58\n-\t\t\t@ instruction: 0xe8ca0016\n+\tldmdb\tr6!, {r1, r2, r4}\n+\tldrd\tr0, r0, [r6, #-88]!\t@ 0x58\n+\t\t\t@ instruction: 0xe8d20016\n \tb.n\t29b5a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd76e>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t29b65c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd828>\n \tb.n\t29b64e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd81a>\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [r5, #0]\n /usr/include/c++/10/bits/basic_string.h:231\n@@ -1345241,27 +1345241,27 @@\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr6, r3, #30\n \tmovs\tr1, r4\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t29b8c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfda90>\n+\tb.n\t29b8d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdaa0>\n \tmovs\tr6, r2\n \tadd\tr5, pc, #776\t@ (adr r5, 29bd48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdf14>)\n \tmovs\tr4, r2\n-\tb.n\t29b760 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd92c>\n+\tb.n\t29b770 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd93c>\n \tmovs\tr6, r2\n \tasrs\tr6, r7, #24\n \tmovs\tr1, r4\n \tadd\tr4, pc, #336\t@ (adr r4, 29bb9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdd68>)\n \tmovs\tr4, r2\n \tadd\tr4, pc, #304\t@ (adr r4, 29bb80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfdd4c>)\n \tmovs\tr4, r2\n-\tb.n\t29b51c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd6e8>\n+\tb.n\t29b52c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd6f8>\n \tmovs\tr6, r2\n Assembly::priv_loadAlignmentsFromFile(int, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/assembly_swalign.C:934\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n \tldr\tr5, [pc, #988]\t@ (29be38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfe004>)\n \tvpush\t{d8-d10}\n@@ -1345753,36 +1345753,36 @@\n \teors\tr1, r3\n \tasrs\tr2, r7, #19\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr2, r2, #19\n \tmovs\tr1, r4\n-\tb.n\t29c3d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfe5a4>\n+\tb.n\t29c3e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfe5b4>\n \tmovs\tr6, r2\n-\tmovs\tr2, #246\t@ 0xf6\n+\tmovs\tr2, #254\t@ 0xfe\n \tmovs\tr6, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t29b6d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8a0>\n+\tb.n\t29b6e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8b0>\n \tmovs\tr6, r2\n-\tb.n\t29b6d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8a4>\n+\tb.n\t29b6e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8b4>\n \tmovs\tr6, r2\n-\tb.n\t29b6dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8a8>\n+\tb.n\t29b6ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8b8>\n \tmovs\tr6, r2\n-\tb.n\t29b6cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd898>\n+\tb.n\t29b6dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8a8>\n \tmovs\tr6, r2\n-\tb.n\t29b6d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd89c>\n+\tb.n\t29b6e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8ac>\n \tmovs\tr6, r2\n-\tb.n\t29b6d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8a4>\n+\tb.n\t29b6e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfd8b4>\n \tmovs\tr6, r2\n-\tmov\tlr, fp\n+\tmov\tlr, ip\n \tmovs\tr6, r2\n-\tvst1.8\t\t\t@ instruction: 0xf9cc0016\n-\tadds\tr1, #78\t@ 0x4e\n+\tldr??.w\tr0, [r4, #22]\n+\tadds\tr1, #90\t@ 0x5a\n \tmovs\tr5, r2\n \tvmov\tr1, s17\n \tmov\tr0, r4\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n \tcmp\tr8, r5\n \tbeq.n\t29bebc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfe088>\n@@ -1347706,97 +1347706,97 @@\n /usr/include/c++/10/bits/vector.tcc:96\n \tadd\tr3, r7\n /usr/include/c++/10/bits/vector.tcc:97\n \tstr.w\tr0, [fp, #2244]\t@ 0x8c4\n /usr/include/c++/10/bits/vector.tcc:96\n \tstr.w\tr3, [fp, #2240]\t@ 0x8c0\n \tb.w\t29bc9a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfde66>\n-\tb.n\t29ce80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff04c>\n+\tb.n\t29ce90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff05c>\n \tmovs\tr6, r2\n \tlsrs\tr4, r6, #12\n \tmovs\tr0, r0\n-\tbmi.n\t29ccd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeea4>\n+\tbmi.n\t29ccf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeebc>\n \tmovs\tr4, r2\n \tlsrs\tr6, r1, #23\n \tmovs\tr1, r4\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tblt.n\t29cd14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeee0>\n+\tblt.n\t29cd24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeef0>\n \tmovs\tr6, r2\n-\tsubs\tr6, r2, r7\n+\tsubs\tr6, r3, r7\n \tmovs\tr6, r2\n-\tldr\tr5, [sp, #392]\t@ 0x188\n+\tldr\tr5, [sp, #424]\t@ 0x1a8\n \tmovs\tr5, r2\n-\tble.n\t29ce54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff020>\n+\tble.n\t29ce64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff030>\n \tmovs\tr6, r2\n-\tble.n\t29cdf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfefbc>\n+\tble.n\t29ce00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfefcc>\n \tmovs\tr6, r2\n-\tble.n\t29cdf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfefbc>\n+\tble.n\t29ce00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfefcc>\n \tmovs\tr6, r2\n-\tcmp\tr2, #248\t@ 0xf8\n+\tcmp\tr3, #4\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tbgt.n\t29cd04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeed0>\n+\tbgt.n\t29cd14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeee0>\n \tmovs\tr6, r2\n-\tbgt.n\t29cce4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeeb0>\n+\tbgt.n\t29ccf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeec0>\n \tmovs\tr6, r2\n-\tadds\tr6, r1, r2\n+\tadds\tr6, r2, r2\n \tmovs\tr6, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tblt.n\t29ce80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff04c>\n+\tblt.n\t29ce90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff05c>\n \tmovs\tr6, r2\n-\tbge.n\t29cd64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfef30>\n+\tbge.n\t29cd74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfef40>\n \tmovs\tr6, r2\n-\tbge.n\t29ce88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff054>\n+\tbge.n\t29ce98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff064>\n \tmovs\tr7, r2\n-\tasrs\tr2, r3, #25\n+\tasrs\tr2, r4, #25\n \tmovs\tr6, r2\n-\tbge.n\t29ce98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff064>\n+\tbge.n\t29cea8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff074>\n \tmovs\tr6, r2\n-\tasrs\tr4, r0, #21\n+\tasrs\tr4, r1, #21\n \tmovs\tr6, r2\n-\tasrs\tr2, r0, #21\n+\tasrs\tr2, r1, #21\n \tmovs\tr6, r2\n-\tbls.n\t29cd24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfeef0>\n+\tbls.n\t29cd34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfef00>\n \tmovs\tr6, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbhi.n\t29cdc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfef8c>\n+\tbhi.n\t29cdd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfef9c>\n \tmovs\tr6, r2\n-\tbhi.n\t29cda4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfef70>\n+\tbhi.n\t29cdb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xfef80>\n \tmovs\tr6, r2\n-\tldrsh\tr4, [r5, r4]\n+\tldrsh\tr4, [r6, r4]\n \tmovs\tr5, r2\n-\tldrsh\tr2, [r3, r4]\n+\tldrsh\tr2, [r4, r4]\n \tmovs\tr5, r2\n-\tldrsh\tr0, [r0, r3]\n+\tldrsh\tr0, [r1, r3]\n \tmovs\tr5, r2\n-\tldrsh\tr4, [r5, r2]\n+\tldrsh\tr4, [r6, r2]\n \tmovs\tr5, r2\n-\tldrsh\tr0, [r2, r3]\n+\tldrsh\tr0, [r3, r3]\n \tmovs\tr5, r2\n-\tcbnz\tr6, 29cea6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff072>\n+\tcbnz\tr6, 29cea8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff074>\n \tmovs\tr5, r2\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tbvs.n\t29ce7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff048>\n+\tbvs.n\t29ce8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff058>\n \tmovs\tr6, r2\n-\tbpl.n\t29cf24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff0f0>\n+\tbpl.n\t29cf34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff100>\n \tmovs\tr6, r2\n-\tasrs\tr2, r0, #6\n+\tasrs\tr2, r1, #6\n \tmovs\tr6, r2\n ./src/mira/../../src/mira/readpool.H:123\n \tldr\tr4, [sp, #44]\t@ 0x2c\n \tmov\tr0, r4\n \tbl\t293cfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xf5ec8>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #1932]\t@ 29d5dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff7a8>\n@@ -1348846,58 +1348846,58 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t29d5a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff774>\n \tb.n\t29d4d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff69c>\n \tb.n\t29d4a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff672>\n \tb.n\t29d340 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff50c>\n \tb.n\t29d354 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff520>\n-\tstmia\tr6!, {r3, r5, r7}\n+\tstmia\tr6!, {r2, r4, r5, r7}\n \tmovs\tr4, r2\n-\tstmia\tr6!, {r1, r5, r7}\n+\tstmia\tr6!, {r1, r2, r3, r5, r7}\n \tmovs\tr4, r2\n-\tbgt.n\t29d5a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff76c>\n+\tbgt.n\t29d5b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff77c>\n \tmovs\tr6, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr4, [sp, #616]\t@ 0x268\n+\tldr\tr4, [sp, #664]\t@ 0x298\n \tmovs\tr4, r2\n-\tldr\tr4, [sp, #592]\t@ 0x250\n+\tldr\tr4, [sp, #640]\t@ 0x280\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tbne.n\t29d588 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff754>\n+\tbne.n\t29d598 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff764>\n \tmovs\tr6, r2\n-\tbne.n\t29d588 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff754>\n+\tbne.n\t29d598 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff764>\n \tmovs\tr6, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r1, r4}\n+\tstmia\tr5!, {r1, r2, r3, r4}\n \tmovs\tr4, r2\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldmia\tr5, {r1, r5, r6, r7}\n+\tldmia\tr5, {r1, r3, r5, r6, r7}\n \tmovs\tr6, r2\n-\t\t\t@ instruction: 0xfa640015\n-\tldmia\tr5, {r1, r2, r3, r5, r6, r7}\n+\t\t\t@ instruction: 0xfa6c0015\n+\tldmia\tr5, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr6, r2\n-\tldmia\tr5, {r2, r3, r4, r5, r7}\n+\tldmia\tr5!, {r2, r6, r7}\n \tmovs\tr6, r2\n-\tasrs\tr4, r7, #4\n+\tasrs\tr0, r1, #5\n \tmovs\tr5, r2\n-\tasrs\tr0, r6, #4\n+\tasrs\tr4, r7, #4\n \tmovs\tr5, r2\n-\tldmia\tr4, {r1, r3, r4, r6, r7}\n+\tldmia\tr4!, {r1, r5, r6, r7}\n \tmovs\tr6, r2\n newedges_t::sortComparatorByRIDUpByWeightDown(newedges_t const&, newedges_t const&):\n ./src/mira/../../src/mira/overlapedges.H:49\n \tldr\tr2, [r0, #0]\n \tldr\tr3, [r1, #0]\n \tcmp\tr2, r3\n \tbeq.n\t29d648 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xff814>\n@@ -1349140,35 +1349140,35 @@\n \tadd\tsp, #12\n \tpop\t{r4, r5, r6, r7, pc}\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \tldr??.w\tr0, [lr, #32]\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr2, [r5, r7]\n+\tstr\tr2, [r6, r7]\n \tmovs\tr5, r2\n-\tstr\tr0, [r2, r6]\n+\tstr\tr0, [r3, r6]\n \tmovs\tr5, r2\n-\tstr\tr4, [r0, r6]\n+\tstr\tr4, [r1, r6]\n \tmovs\tr5, r2\n-\tstr\tr4, [r6, r5]\n+\tstr\tr4, [r7, r5]\n \tmovs\tr5, r2\n-\tstr\tr0, [r5, r5]\n+\tstr\tr0, [r6, r5]\n \tmovs\tr5, r2\n-\tstr\tr0, [r3, r5]\n+\tstr\tr0, [r4, r5]\n \tmovs\tr5, r2\n-\tstr\tr0, [r1, r5]\n+\tstr\tr0, [r2, r5]\n \tmovs\tr5, r2\n-\tstr\tr0, [r7, r4]\n+\tstr\tr0, [r0, r5]\n \tmovs\tr5, r2\n-\tstr\tr0, [r5, r4]\n+\tstr\tr0, [r6, r4]\n \tmovs\tr5, r2\n-\tstr\tr0, [r3, r4]\n+\tstr\tr0, [r4, r4]\n \tmovs\tr5, r2\n-\tstr\tr0, [r0, r4]\n+\tstr\tr0, [r1, r4]\n \tmovs\tr5, r2\n \t\t\t@ instruction: 0xf7940020\n std::vector >::insert(__gnu_cxx::__normal_iterator > >, unsigned int const&):\n /usr/include/c++/10/bits/vector.tcc:130\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/vector.tcc:138\n@@ -1349325,15 +1349325,15 @@\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t29d90a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xffad6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (29d934 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xffb00>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstr\tr2, [sp, #992]\t@ 0x3e0\n+\tstr\tr3, [sp, #16]\n \tmovs\tr4, r2\n bannedoverlappairs_t::insertBan(unsigned int, unsigned int):\n ./src/mira/../../src/mira/skim.H:189\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/../../src/mira/skim.H:191\n \tmov\tip, r2\n ./src/mira/../../src/mira/skim.H:189\n@@ -1349648,25 +1349648,25 @@\n \tb.n\t29db4e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xffd1a>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \taddw\tr0, r0, #2080\t@ 0x820\n \t\t\t@ instruction: 0xf5fe0020\n \tsbcs.w\tr0, sl, #10485760\t@ 0xa00000\n-\tstrb\tr0, [r1, r0]\n+\tstrb\tr0, [r2, r0]\n \tmovs\tr5, r2\n-\tstrh\tr4, [r7, r7]\n+\tstrb\tr4, [r0, r0]\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #19\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr2, r0, #4\n+\tlsrs\tr6, r1, #4\n \tmovs\tr5, r2\n std::vector >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldrd\tr4, r5, [r0]\n@@ -1350313,15 +1350313,15 @@\n /usr/include/c++/10/bits/vector.tcc:99\n \tadd\tsp, #12\n \tldmia.w\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, pc}\n /usr/include/c++/10/bits/vector.tcc:70\n \tldr\tr0, [pc, #4]\t@ (29e008 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1001d4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsls\tr2, r7, #16\n+\tlsls\tr6, r0, #17\n \tmovs\tr5, r2\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t29e366 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100532>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1350774,15 +1350774,15 @@\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t29e376 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100542>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (29e3ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1005b8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcbz\tr4, 29e40a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1005d6>\n+\tcbz\tr0, 29e40e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1005da>\n \tmovs\tr4, r2\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t29e74a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100916>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1351235,15 +1351235,15 @@\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t29e75a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100926>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (29e7d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x10099c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr5, sp, #544\t@ 0x220\n+\tadd\tr5, sp, #592\t@ 0x250\n \tmovs\tr4, r2\n std::vector >, std::allocator > > >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t29e8ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100ab8>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1351681,15 +1351681,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t29ea9e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100c6a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (29eac4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100c90>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr2, sp, #592\t@ 0x250\n+\tadd\tr2, sp, #640\t@ 0x280\n \tmovs\tr4, r2\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tldr\tr2, [pc, #124]\t@ (29eb48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x100d14>)\n /usr/include/c++/10/bits/stl_algo.h:1823\n \tmov\tip, r0\n /usr/include/c++/10/bits/stl_algo.h:1819\n@@ -1353374,15 +1353374,15 @@\n \tstmia.w\tr4, {r0, r1}\n \tb.n\t29f60c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1017d8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (29f870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x101a3c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstrb\tr4, [r7, #14]\n+\tstrb\tr0, [r1, #15]\n \tmovs\tr4, r2\n void std::__push_heap<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse > >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tsub\tsp, #8\n /usr/include/c++/10/bits/stl_heap.h:138\n \tadd.w\tip, r1, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/stl_heap.h:139\n@@ -1377425,17 +1377425,17 @@\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #23\n \tmovs\tr0, r0\n \tlsrs\tr2, r5, #14\n \tmovs\tr0, r4\n-\tudf\t#100\t@ 0x64\n+\tudf\t#108\t@ 0x6c\n \tmovs\tr5, r2\n-\tudf\t#98\t@ 0x62\n+\tudf\t#106\t@ 0x6a\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::makeIntelligentConsensus_helper2_calcSangerQual(char&, unsigned char&, unsigned int, std::vector > const&, std::vector >&, unsigned char, unsigned int):\n ./src/mira/contig_consensus.C:881\n@@ -1380522,27 +1380522,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr3!, {r4, r6, r7}\n+\tldmia\tr3, {r3, r4, r6, r7}\n \tmovs\tr5, r2\n-\tldmia\tr2!, {r3, r4, r6, r7}\n+\tldmia\tr2!, {r5, r6, r7}\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #176\t@ 0xb0\n+\tadd\tr7, sp, #208\t@ 0xd0\n \tmovs\tr5, r2\n-\tldmia\tr1, {r1, r3, r5, r7}\n+\tldmia\tr1, {r1, r4, r5, r7}\n \tmovs\tr5, r2\n-\tldmia\tr1, {r1, r2, r4, r7}\n+\tldmia\tr1, {r1, r2, r3, r4, r7}\n \tmovs\tr5, r2\n Contig::makeIntelligentConsensus_helper2_calc454GS20(char&, unsigned char&, unsigned int, std::vector > const&, std::vector >&):\n ./src/mira/contig_consensus.C:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr6, #43691\t@ 0xaaab\n \tmovt\tr6, #43690\t@ 0xaaaa\n@@ -1382178,15 +1382178,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #496\t@ (adr r6, 2ae8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110ac8>)\n+\tadd\tr6, pc, #528\t@ (adr r6, 2ae91c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110ae8>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r3, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1382426,27 +1382426,27 @@\n \tadds\tr1, #1\n \tblx\tb538 \n ./src/mira/../../src/mira/hdeque.H:136\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t2ae8d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110aa0>\n \tnop\n-\tpop\t{r3, r5, r6, r7}\n+\tpop\t{r4, r5, r6, r7}\n \tmovs\tr5, r2\n-\tpop\t{r1, r2, r4, r6, r7}\n+\tpop\t{r1, r2, r3, r4, r6, r7}\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #800\t@ (adr r0, 2aec30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110dfc>)\n+\tadd\tr0, pc, #832\t@ (adr r0, 2aec50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110e1c>)\n \tmovs\tr5, r2\n-\tcbnz\tr6, 2ae964 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110b30>\n+\tcbnz\tr6, 2ae966 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110b32>\n \tmovs\tr5, r2\n-\tpop\t{r3, r4}\n+\tpop\t{r5}\n \tmovs\tr5, r2\n Contig::priv_mic_helper_filterGoodnessLevels(HDeque::hditer, signed char, std::vector >, std::allocator > > >&, std::vector >, std::allocator > > >&, std::vector >&, unsigned char&):\n ./src/mira/contig_consensus.C:2359\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r2\n \tldr\tr2, [pc, #752]\t@ (2aec10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110ddc>)\n \tsub\tsp, #276\t@ 0x114\n@@ -1382847,15 +1382847,15 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t2aebca , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110d96>\n \tb.n\t2ae88c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110a58>\n \tmovs\tr7, r3\n-\tbls.n\t2aebac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110d78>\n+\tbls.n\t2aebbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110d88>\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t2ae828 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1109f4>\n \tmovs\tr7, r3\n \tb.n\t2ae5b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110780>\n \tmovs\tr7, r3\n@@ -1382865,15 +1382865,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #1000]\t@ 0x3e8\n+\tadd\tr0, pc, #8\t@ (adr r0, 2aec44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x110e10>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r3, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1383259,29 +1383259,29 @@\n \tmovs\tr7, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t2af4ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1116b8>\n \tmovs\tr7, r3\n \tb.n\t2af41c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1115e8>\n \tmovs\tr7, r3\n-\t\t\t@ instruction: 0xb7ac\n+\t\t\t@ instruction: 0xb7b4\n \tmovs\tr5, r2\n-\t\t\t@ instruction: 0xb7aa\n+\t\t\t@ instruction: 0xb7b2\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb7f4\n+\t\t\t@ instruction: 0xb7fc\n \tmovs\tr5, r2\n-\t\t\t@ instruction: 0xb7d6\n+\t\t\t@ instruction: 0xb7de\n \tmovs\tr5, r2\n-\t\t\t@ instruction: 0xb718\n+\t\t\t@ instruction: 0xb720\n \tmovs\tr5, r2\n Contig::priv_mic_helper_rateGoodnessLevelOfAllGroups(HDeque::hditer, std::vector >, std::allocator > > > const&, std::vector >, std::allocator > > >&, std::vector >, std::allocator > > > const&):\n ./src/mira/contig_consensus.C:2396\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n \tldr\tr2, [pc, #668]\t@ (2af1b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x111380>)\n \tmov\tr9, r3\n@@ -1383660,17 +1383660,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpush\t{r1, r2, r4, r5, r6, lr}\n+\tpush\t{r1, r2, r3, r4, r5, r6, lr}\n \tmovs\tr5, r2\n-\tpush\t{r1, r4, r5, r6, lr}\n+\tpush\t{r1, r3, r4, r5, r6, lr}\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tudf\t#40\t@ 0x28\n \tmovs\tr7, r3\n@@ -1385129,37 +1385129,37 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr4, [r2, #56]\t@ 0x38\n+\tldr\tr4, [r3, #56]\t@ 0x38\n \tmovs\tr4, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #472]\t@ 0x1d8\n+\tldr\tr2, [sp, #520]\t@ 0x208\n \tmovs\tr3, r2\n-\tldr\tr2, [sp, #456]\t@ 0x1c8\n+\tldr\tr2, [sp, #504]\t@ 0x1f8\n \tmovs\tr3, r2\n-\tsub\tsp, #200\t@ 0xc8\n+\tsub\tsp, #232\t@ 0xe8\n \tmovs\tr5, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #424\t@ 0x1a8\n+\tadd\tr3, sp, #456\t@ 0x1c8\n \tmovs\tr5, r2\n-\tadd\tr3, sp, #352\t@ 0x160\n+\tadd\tr3, sp, #384\t@ 0x180\n \tmovs\tr5, r2\n-\tadd\tr3, sp, #328\t@ 0x148\n+\tadd\tr3, sp, #360\t@ 0x168\n \tmovs\tr5, r2\n /usr/include/c++/10/ostream:611\n \tldr\tr6, [pc, #280]\t@ (2afdf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x111fc4>)\n \tmovs\tr2, #13\n \tldr\tr4, [sp, #20]\n ./src/mira/contig_consensus.C:1507\n \tadd\tr5, sp, #136\t@ 0x88\n@@ -1385306,19 +1385306,19 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t2afdac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x111f78>\n \tb.n\t2afdbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x111f88>\n \tb.n\t2afd6e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x111f3a>\n \tb.n\t2afd7e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x111f4a>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #480\t@ 0x1e0\n+\tadd\tr2, sp, #512\t@ 0x200\n \tmovs\tr5, r2\n-\tadd\tr4, sp, #192\t@ 0xc0\n+\tadd\tr4, sp, #224\t@ 0xe0\n \tmovs\tr5, r2\n-\tadd\tr2, sp, #392\t@ 0x188\n+\tadd\tr2, sp, #424\t@ 0x1a8\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::makeIntelligentConsensus(std::__cxx11::basic_string, std::allocator >&, std::vector >&, std::vector >*, int, int, int, int, unsigned char, char, bool, bool, bool):\n ./src/mira/contig_consensus.C:1663\n@@ -1386893,23 +1386893,23 @@\n \tmovs\tr0, r0\n \tbne.n\t2b0a9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x112c68>\n \tmovs\tr7, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #208\t@ 0xd0\n+\tadd\tr5, sp, #240\t@ 0xf0\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #720]\t@ 0x2d0\n+\tldr\tr7, [sp, #752]\t@ 0x2f0\n \tmovs\tr5, r2\n-\tldr\tr7, [sp, #776]\t@ 0x308\n+\tldr\tr7, [sp, #808]\t@ 0x328\n \tmovs\tr5, r2\n-\tldr\tr7, [sp, #656]\t@ 0x290\n+\tldr\tr7, [sp, #688]\t@ 0x2b0\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_vector.h:919\n \tldr\tr4, [sp, #56]\t@ 0x38\n@@ -1388635,15 +1388635,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #360]\t@ (2b18d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x113a9c>)\n+\tldr\tr5, [pc, #392]\t@ (2b18f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x113abc>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1388982,31 +1388982,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr4, [r4, #19]\n+\tldrb\tr0, [r6, #19]\n \tmovs\tr3, r2\n-\tldrb\tr0, [r4, #19]\n+\tldrb\tr4, [r5, #19]\n \tmovs\tr3, r2\n-\tstr\tr3, [sp, #128]\t@ 0x80\n+\tstr\tr3, [sp, #160]\t@ 0xa0\n \tmovs\tr5, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrb\tr2, [r5, #15]\n+\tldrb\tr6, [r6, #15]\n \tmovs\tr3, r2\n-\tldrb\tr6, [r3, #15]\n+\tldrb\tr2, [r5, #15]\n \tmovs\tr3, r2\n-\tadd\tr3, pc, #688\t@ (adr r3, 2b1cd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x113ea4>)\n+\tadd\tr3, pc, #720\t@ (adr r3, 2b1cf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x113ec4>)\n \tmovs\tr5, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n ./src/mira/contig_consensus.C:2201\n \tldrb.w\tr4, [r9]\n \tcmp\tr4, #42\t@ 0x2a\n \tbeq.w\t2b27ce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11499a>\n@@ -1390420,25 +1390420,25 @@\n /usr/include/c++/10/bits/stl_algo.h:1826\n \tcmp\tr7, r2\n \tbcc.n\t2b2424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1145f0>\n /usr/include/c++/10/bits/stl_algo.h:1832\n \tstrb\tr7, [r0, #0]\n \tb.w\t2b1b24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x113cf0>\n \tnop\n-\tstr\tr0, [sp, #56]\t@ 0x38\n+\tstr\tr0, [sp, #88]\t@ 0x58\n \tmovs\tr5, r2\n-\tldrh\tr6, [r2, #54]\t@ 0x36\n+\tldrh\tr6, [r3, #54]\t@ 0x36\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr6, [r3, #34]\t@ 0x22\n+\tldrh\tr6, [r4, #34]\t@ 0x22\n \tmovs\tr5, r2\n-\tldrh\tr2, [r7, #26]\n+\tldrh\tr2, [r0, #28]\n \tmovs\tr5, r2\n \tadd\tr3, sp, #664\t@ 0x298\n \tmovs\tr7, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_algo.h:1866\n \tmov\tip, r5\n@@ -1390958,21 +1390958,21 @@\n \tstrb.w\tr4, [r8]\n \tb.w\t2b14a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11366c>\n \tnop.w\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tstrh\tr2, [r0, #40]\t@ 0x28\n+\tstrh\tr2, [r1, #40]\t@ 0x28\n \tmovs\tr5, r2\n-\tadd\tr4, sp, #120\t@ 0x78\n+\tadd\tr4, sp, #152\t@ 0x98\n \tmovs\tr4, r2\n-\tcmp\tr5, #88\t@ 0x58\n+\tcmp\tr5, #96\t@ 0x60\n \tmovs\tr6, r2\n-\tsubs\tr1, #194\t@ 0xc2\n+\tsubs\tr1, #202\t@ 0xca\n \tmovs\tr4, r2\n ./src/mira/contig_consensus.C:2092\n \tldrb\tr2, [r4, #0]\n \tcmp\tr2, #65\t@ 0x41\n \tbeq.n\t2b2926 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x114af2>\n \tmovs\tr1, #0\n \tstr.w\tr1, [r5, #260]\t@ 0x104\n@@ -1392238,65 +1392238,65 @@\n \tnop\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr4, [r7, #31]\n+\tstrh\tr4, [r0, #0]\n+\tmovs\tr5, r2\n+\tldrb\tr2, [r7, #31]\n \tmovs\tr5, r2\n-\tldrb\tr2, [r6, #31]\n+\tldrb\tr4, [r6, #31]\n \tmovs\tr5, r2\n-\tldrb\tr4, [r5, #31]\n+\tldrb\tr6, [r5, #31]\n \tmovs\tr5, r2\n-\tldrb\tr6, [r4, #31]\n+\tldrb\tr0, [r5, #31]\n \tmovs\tr5, r2\n \tldrb\tr0, [r4, #31]\n \tmovs\tr5, r2\n-\tldrb\tr0, [r3, #31]\n-\tmovs\tr5, r2\n-\tldrb\tr2, [r5, #30]\n+\tldrb\tr2, [r6, #30]\n \tmovs\tr5, r2\n-\tldrb\tr0, [r7, #30]\n+\tldrb\tr0, [r0, #31]\n \tmovs\tr5, r2\n-\tldrb\tr2, [r6, #30]\n+\tldrb\tr2, [r7, #30]\n \tmovs\tr5, r2\n-\tstrb\tr0, [r6, #7]\n+\tstrb\tr4, [r7, #7]\n \tmovs\tr3, r2\n-\tldrb\tr2, [r6, #25]\n+\tldrb\tr2, [r7, #25]\n \tmovs\tr5, r2\n-\tldrb\tr2, [r0, #21]\n+\tldrb\tr2, [r1, #21]\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr7, #56\t@ 0x38\n+\tsubs\tr7, #68\t@ 0x44\n \tmovs\tr3, r2\n-\tsubs\tr7, #50\t@ 0x32\n+\tsubs\tr7, #62\t@ 0x3e\n \tmovs\tr3, r2\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n-\tldrb\tr6, [r6, r6]\n+\tldrb\tr2, [r0, r7]\n \tmovs\tr3, r2\n-\tldrb\tr4, [r5, r6]\n+\tldrb\tr0, [r7, r6]\n \tmovs\tr3, r2\n-\tldrb\tr6, [r3, r6]\n+\tldrb\tr2, [r5, r6]\n \tmovs\tr3, r2\n-\tldrb\tr4, [r2, r6]\n+\tldrb\tr0, [r4, r6]\n \tmovs\tr3, r2\n-\tldrb\tr6, [r0, #19]\n+\tldrb\tr6, [r1, #19]\n \tmovs\tr5, r2\n-\tldrb\tr6, [r2, #15]\n+\tldrb\tr6, [r3, #15]\n \tmovs\tr5, r2\n-\t\t\t@ instruction: 0xb64e\n+\t\t\t@ instruction: 0xb65a\n \tmovs\tr3, r2\n-\tbxns\tr5\n+\tbxns\tr6\n \tmovs\tr4, r2\n-\tbx\tip\n+\tbx\tsp\n \tmovs\tr4, r2\n Contig::calcConsensi(int, unsigned char, char, bool):\n ./src/mira/contig_consensus.C:78\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r3\n \tldr.w\tr5, [pc, #1468]\t@ 2b37d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1159a0>\n \tldr.w\tr4, [pc, #1468]\t@ 2b37d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1159a4>\n@@ -1393568,33 +1393568,33 @@\n \tmovs\tr7, r3\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tstr\tr5, [sp, #216]\t@ 0xd8\n \tmovs\tr7, r3\n-\tstrb\tr2, [r3, #2]\n+\tstrb\tr2, [r4, #2]\n \tmovs\tr5, r2\n-\tstrb\tr4, [r3, #2]\n+\tstrb\tr4, [r4, #2]\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr0, [r3, #3]\n+\tstrb\tr0, [r4, #3]\n \tmovs\tr5, r2\n-\tstrb\tr4, [r2, #3]\n+\tstrb\tr4, [r3, #3]\n \tmovs\tr5, r2\n-\tstrb\tr4, [r2, #3]\n+\tstrb\tr4, [r3, #3]\n \tmovs\tr5, r2\n-\tldr\tr4, [r0, #124]\t@ 0x7c\n+\tldr\tr4, [r1, #124]\t@ 0x7c\n \tmovs\tr5, r2\n-\tldr\tr4, [r7, #124]\t@ 0x7c\n+\tstrb\tr4, [r0, #0]\n \tmovs\tr5, r2\n-\tldr\tr2, [r4, #116]\t@ 0x74\n+\tldr\tr2, [r5, #116]\t@ 0x74\n \tmovs\tr5, r2\n Contig::ensureConsensus(int):\n ./src/mira/contig_consensus.C:183\n \tldr.w\tr2, [r0, #548]\t@ 0x224\n ./src/mira/contig_consensus.C:179\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n@@ -1394379,25 +1394379,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr3, [pc, #128]\t@ (2b4364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116530>)\n+\tldr\tr3, [pc, #160]\t@ (2b4384 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116550>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r3, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #112]\t@ (2b4364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116530>)\n+\tldr\tr2, [pc, #144]\t@ (2b4384 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116550>)\n \tmovs\tr4, r2\n-\tldr\tr1, [pc, #88]\t@ (2b4350 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11651c>)\n+\tldr\tr1, [pc, #120]\t@ (2b4370 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11653c>)\n \tmovs\tr4, r2\n /usr/include/boost/iterator/iterator_facade.hpp:550\n \tmov\tr0, r4\n \tbl\t208b7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x6ad48>\n ./src/mira/contig_consensus.C:2645\n \tldrb.w\tr7, [r0, #84]\t@ 0x54\n /usr/include/boost/iterator/iterator_facade.hpp:550\n@@ -1395085,39 +1395085,39 @@\n \tblx\tb538 \n ./src/mira/contig_consensus.C:2738 (discriminator 9)\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t2b4752 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11691e>\n \tb.n\t2b4804 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1169d0>\n \tnop\n-\tldr\tr0, [pc, #128]\t@ (2b4894 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116a60>)\n+\tldr\tr0, [pc, #160]\t@ (2b48b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116a80>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r3, #27\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbx\tlr\n+\tbx\tpc\n \tmovs\tr4, r2\n-\tstr\tr6, [r5, #68]\t@ 0x44\n+\tstr\tr6, [r6, #68]\t@ 0x44\n \tmovs\tr5, r2\n-\tstr\tr4, [r4, #112]\t@ 0x70\n+\tstr\tr4, [r5, #112]\t@ 0x70\n \tmovs\tr5, r2\n-\tstr\tr6, [r1, #76]\t@ 0x4c\n+\tstr\tr6, [r2, #76]\t@ 0x4c\n \tmovs\tr5, r2\n-\tstr\tr0, [r0, #108]\t@ 0x6c\n+\tstr\tr0, [r1, #108]\t@ 0x6c\n \tmovs\tr5, r2\n-\tadds\tr4, #52\t@ 0x34\n+\tadds\tr4, #60\t@ 0x3c\n \tmovs\tr4, r2\n-\tstr\tr2, [r5, #96]\t@ 0x60\n+\tstr\tr2, [r6, #96]\t@ 0x60\n \tmovs\tr5, r2\n-\tstr\tr0, [r4, #88]\t@ 0x58\n+\tstr\tr0, [r5, #88]\t@ 0x58\n \tmovs\tr5, r2\n-\tstr\tr2, [r0, #84]\t@ 0x54\n+\tstr\tr2, [r1, #84]\t@ 0x54\n \tmovs\tr5, r2\n Contig::updateBackboneConsensus():\n ./src/mira/contig_consensus.C:2758\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1148]\t@ 2b4cc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116e94>\n \tldr.w\tr2, [pc, #1148]\t@ 2b4ccc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x116e98>\n@@ -1395749,15 +1395749,15 @@\n \tmovs\tr7, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr6, [r6, #54]\t@ 0x36\n \tmovs\tr7, r3\n \tstrh\tr4, [r6, #28]\n \tmovs\tr7, r3\n-\tsubs\tr7, #92\t@ 0x5c\n+\tsubs\tr7, #100\t@ 0x64\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1396951,15 +1396951,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t2b559a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x117766>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2b5750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11791c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tsubs\tr6, #8\n+\tsubs\tr6, #20\n \tmovs\tr3, r2\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, signed char const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldrd\tr9, r7, [r0]\n /usr/include/c++/10/bits/stl_vector.h:1758\n@@ -1397059,15 +1397059,15 @@\n \tcmp.w\tr9, #0\n \tbeq.n\t2b57c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11798c>\n \tb.n\t2b57dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1179a8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2b580c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1179d8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tasrs\tr6, r3, #16\n+\tasrs\tr2, r5, #16\n \tmovs\tr3, r2\n void std::vector >, std::allocator > > >::_M_realloc_insert > const&>(__gnu_cxx::__normal_iterator >*, std::vector >, std::allocator > > > >, std::vector > const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr2, #43691\t@ 0xaaab\n@@ -1398179,15 +1398179,15 @@\n /usr/include/c++/10/bits/stl_vector.h:353\n \tcbz\tr0, 2b61f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1183c4>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tmov\tr0, sl\n \tb.n\t2b6186 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x118352>\n-\tlsrs\tr4, r6, #10\n+\tlsrs\tr0, r0, #11\n \tmovs\tr3, r2\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, Contig::rpicsocache_t&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr\tr3, [r0, #0]\n \tsub\tsp, #28\n@@ -1398402,15 +1398402,15 @@\n \tmovw\tr7, #65512\t@ 0xffe8\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t2b6376 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x118542>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2b6414 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1185e0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsrs\tr6, r2, #32\n+\tlsrs\tr2, r4, #32\n \tmovs\tr3, r2\n void std::vector >::emplace_back(int&&):\n /usr/include/c++/10/bits/vector.tcc:109\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r0\n \tmov\tr9, r1\n /usr/include/c++/10/bits/vector.tcc:112\n@@ -1398494,15 +1398494,15 @@\n \tmovw\tr6, #65532\t@ 0xfffc\n \tmovt\tr6, #32767\t@ 0x7fff\n \tb.n\t2b6490 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11865c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2b64b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x118680>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tlsls\tr6, r6, #29\n+\tlsls\tr2, r0, #30\n \tmovs\tr3, r2\n HDeque::hditer::increment():\n ./src/mira/../../src/mira/hdeque.H:147\n \tpush\t{r4, r5, r6, r7}\n ./src/mira/../../src/mira/hdeque.H:149\n \tldr\tr4, [r0, #0]\n \tldr\tr5, [r0, #24]\n@@ -1402971,23 +1402971,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr6, r5, #11\n+\tlsrs\tr6, r6, #11\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tlsls\tr4, r4, #24\n+\tlsls\tr4, r5, #24\n \tmovs\tr4, r2\n /usr/include/boost/lexical_cast/detail/lcast_unsigned_converters.hpp:101\n \tldr\tr0, [sp, #16]\n \tblx\tb8e4 const& std::use_facet >(std::locale const&)@plt>\n \tmov\tr9, r0\n /usr/include/c++/10/bits/locale_facets.h:1781\n \tadd\tr0, sp, #104\t@ 0x68\n@@ -1404248,25 +1404248,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr0, r0, #10\n+\tlsls\tr0, r1, #10\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tlsls\tr4, r0, #1\n+\tlsls\tr4, r1, #1\n \tmovs\tr4, r2\n-\tmcr2\t0, 7, r0, cr8, cr3, {0}\n+\tmrc2\t0, 7, r0, cr0, cr3, {0}\n Contig::findPeaks(unsigned int, std::vector >&):\n ./src/mira/contig_covanalysis.C:99\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r2\n \tmov\tr6, r0\n \tldr.w\tr2, [pc, #1420]\t@ 2b9528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11b6f4>\n \tmov\tr5, r1\n@@ -1405475,27 +1405475,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr0, [r3, r2]\n+\tldrb\tr0, [r4, r2]\n \tmovs\tr4, r2\n-\tasrs\tr0, r3, #25\n+\tasrs\tr0, r4, #25\n \tmovs\tr5, r2\n-\tmovs\tr5, #248\t@ 0xf8\n+\tmovs\tr6, #0\n \tmovs\tr5, r2\n-\tasrs\tr6, r0, #23\n+\tasrs\tr6, r1, #23\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tssat16\tr0, #20, lr\n+\t\t\t@ instruction: 0xf3360013\n \tlsrs\tr4, r3, #27\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #160\t@ 0xa0\n \tadd\tr7, sp, #96\t@ 0x60\n \tmov\tr0, sl\n \tblx\tbcc4 \n@@ -1405907,33 +1405907,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr4, sp\n+\tadd\tr0, pc\n \tmovs\tr3, r2\n-\tasrs\tr0, r0, #13\n+\tasrs\tr0, r1, #13\n \tmovs\tr5, r2\n-\tmovs\tr3, #62\t@ 0x3e\n+\tmovs\tr3, #70\t@ 0x46\n \tmovs\tr5, r2\n-\tasrs\tr4, r1, #12\n+\tasrs\tr4, r2, #12\n \tmovs\tr5, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmuls\tr6, r2\n+\tmuls\tr2, r4\n \tmovs\tr3, r2\n-\tasrs\tr6, r0, #10\n+\tasrs\tr6, r1, #10\n \tmovs\tr5, r2\n-\tmovs\tr2, #38\t@ 0x26\n+\tmovs\tr2, #46\t@ 0x2e\n \tmovs\tr5, r2\n-\tasrs\tr4, r6, #7\n+\tasrs\tr4, r7, #7\n \tmovs\tr5, r2\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #72]\t@ 0x48\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd\tr6, sp, #80\t@ 0x50\n \tcmp\tr0, r6\n \tbne.n\t2b9c70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11be3c>\n@@ -1407889,23 +1407889,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t2bb18c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11d358>\n+\tb.n\t2bb19c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11d368>\n \tmovs\tr3, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t2baf44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11d110>\n+\tb.n\t2baf54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11d120>\n \tmovs\tr3, r2\n void __gnu_parallel::parallel_sort_mwms > >, std::less >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, std::less, unsigned short):\n /usr/include/c++/10/parallel/multiway_mergesort.h:395\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tsubs\tr1, r1, r0\n /usr/include/c++/10/parallel/multiway_mergesort.h:407\n@@ -1409147,15 +1409147,15 @@\n \tadd.w\tr6, r8, #16\n \tstmia.w\tsl, {r0, r1, r2, r3}\n \tb.n\t2bb3de , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11d5aa>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2bb538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x11d704>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\t\t\t@ instruction: 0xb6f2\n+\t\t\t@ instruction: 0xb6fe\n \tmovs\tr2, r2\n void std::__introsort_loop<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, __gnu_cxx::__ops::_Iter_comp_iter<__gnu_parallel::_Lexicographic > > >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, __gnu_cxx::__ops::_Iter_comp_iter<__gnu_parallel::_Lexicographic > >):\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tsubs\tr2, r1, r0\n@@ -1428680,17 +1428680,17 @@\n \tb.n\t2c5688 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x127854>\n \tldrb\tr4, [r2, #5]\n \tmovs\tr6, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr0, [r1, #5]\n \tmovs\tr6, r3\n-\tldrsb\tr4, [r3, r5]\n+\tldrsb\tr4, [r4, r5]\n \tmovs\tr4, r2\n-\tldrsb\tr6, [r2, r5]\n+\tldrsb\tr6, [r3, r5]\n \tmovs\tr4, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::blindContig():\n ./src/mira/contig_edit.C:1331\n@@ -1429343,17 +1429343,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr2, [r6, r4]\n+\tstrh\tr2, [r7, r4]\n \tmovs\tr4, r2\n-\tstrh\tr6, [r2, r4]\n+\tstrh\tr6, [r3, r4]\n \tmovs\tr4, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::hasSeqTypeData(unsigned char) const:\n ./src/mira/contig_edit.C:76\n@@ -1429948,19 +1429948,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr7, #108\t@ 0x6c\n+\tadds\tr7, #120\t@ 0x78\n \tmovs\tr2, r2\n-\tadds\tr7, #96\t@ 0x60\n+\tadds\tr7, #108\t@ 0x6c\n \tmovs\tr2, r2\n-\tldrsh\tr0, [r6, r4]\n+\tldrsh\tr0, [r7, r4]\n \tmovs\tr4, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1430581,19 +1430581,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr2, #162\t@ 0xa2\n+\tadds\tr2, #174\t@ 0xae\n \tmovs\tr2, r2\n-\tadds\tr2, #150\t@ 0x96\n+\tadds\tr2, #162\t@ 0xa2\n \tmovs\tr2, r2\n-\tldrh\tr6, [r4, r1]\n+\tldrh\tr6, [r5, r1]\n \tmovs\tr4, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1431798,27 +1431798,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tnegs\tr0, r4\n+\tnegs\tr0, r5\n \tmovs\tr4, r2\n-\tnegs\tr2, r3\n+\tnegs\tr2, r4\n \tmovs\tr4, r2\n-\tnegs\tr2, r1\n+\tnegs\tr2, r2\n \tmovs\tr4, r2\n-\ttst\tr2, r7\n+\tnegs\tr2, r0\n \tmovs\tr4, r2\n-\ttst\tr2, r5\n+\ttst\tr2, r6\n \tmovs\tr4, r2\n-\ttst\tr2, r3\n+\ttst\tr2, r4\n \tmovs\tr4, r2\n-\trors\tr2, r4\n+\trors\tr2, r5\n \tmovs\tr4, r2\n /usr/include/c++/10/new:175\n \tmov\tr9, r5\n \tmov\tlr, r3\n /usr/include/c++/10/bits/vector.tcc:117\n \tadd.w\tsl, r3, #24\n /usr/include/c++/10/bits/stl_iterator.h:1005\n@@ -1432526,30 +1432526,30 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbfi\tr0, lr, #0, #19\n+\t\t\t@ instruction: 0xf3760012\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr3, #40\t@ 0x28\n+\tmovs\tr3, #52\t@ 0x34\n \tmovs\tr2, r2\n-\tmovs\tr3, #36\t@ 0x24\n+\tmovs\tr3, #48\t@ 0x30\n \tmovs\tr2, r2\n-\tsubs\tr1, #100\t@ 0x64\n+\tsubs\tr1, #108\t@ 0x6c\n \tmovs\tr4, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf0f20012\n+\t\t\t@ instruction: 0xf0fa0012\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tfp, [pc, #748]\t@ 2c76d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1298a4>\n \tadd.w\tsl, sp, #232\t@ 0xe8\n \tmov\tr0, sl\n /usr/include/c++/10/ostream:391\n \tldr.w\tr9, [pc, #744]\t@ 2c76dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1298a8>\n /usr/include/c++/10/bits/basic_ios.h:462\n@@ -1432935,35 +1432935,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr0, #108\t@ 0x6c\n+\tmovs\tr0, #120\t@ 0x78\n \tmovs\tr2, r2\n-\tmovs\tr0, #104\t@ 0x68\n+\tmovs\tr0, #116\t@ 0x74\n \tmovs\tr2, r2\n-\tadds\tr6, #168\t@ 0xa8\n+\tadds\tr6, #176\t@ 0xb0\n \tmovs\tr4, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldrh\tr2, [r1, r1]\n \tmovs\tr6, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tsubs\tr4, r2, #5\n+\tsubs\tr0, r4, #5\n \tmovs\tr2, r2\n-\tsubs\tr0, r1, #5\n+\tsubs\tr4, r2, #5\n \tmovs\tr2, r2\n-\tbx\tr3\n+\tbx\tr4\n \tmovs\tr4, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #24\n \tmovs\tr0, r0\n ./src/mira/contig_edit.C:822\n \tadds\tr1, #1\n@@ -1433556,23 +1433556,23 @@\n \tldr.w\tr3, [r9, #-12]\n \tldr\tr2, [sp, #20]\n \tadd\tr3, r8\n \tstr.w\tr9, [sp, #168]\t@ 0xa8\n \tstr.w\tr2, [r3, #-208]\n \tb.n\t2c7b64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x129d30>\n \tnop\n-\tadds\tr7, #14\n+\tadds\tr7, #22\n \tmovs\tr4, r2\n-\tadds\tr7, #32\n+\tadds\tr7, #40\t@ 0x28\n \tmovs\tr4, r2\n-\tadds\tr6, #238\t@ 0xee\n+\tadds\tr6, #246\t@ 0xf6\n \tmovs\tr4, r2\n-\tadds\tr5, #66\t@ 0x42\n+\tadds\tr5, #74\t@ 0x4a\n \tmovs\tr4, r2\n-\tadds\tr5, #32\n+\tadds\tr5, #40\t@ 0x28\n \tmovs\tr4, r2\n std::pair, bool> std::_Hashtable, std::__detail::_Identity, std::equal_to, std::hash, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_insert > > >(int&&, std::__detail::_AllocNode > > const&, std::integral_constant, unsigned int) [clone .isra.0]:\n /usr/include/c++/10/bits/hashtable.h:1800\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r2\n /usr/include/c++/10/bits/hashtable_policy.h:1294\n \tldr.w\tr8, [r2]\n@@ -1434235,23 +1434235,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t2c7b40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x129d0c>\n+\tb.n\t2c7b50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x129d1c>\n \tmovs\tr2, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t2c7928 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x129af4>\n+\tb.n\t2c7938 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x129b04>\n \tmovs\tr2, r2\n /usr/include/boost/iterator/iterator_facade.hpp:550\n \tmov\tr0, r9\n \tbl\t19ab50 \n ./src/mira/../../src/mira/readgrouplib.H:112\n \tldrb.w\tr4, [r0, #151]\t@ 0x97\n ./src/mira/../../src/mira/readgrouplib.H:316\n@@ -1435097,35 +1435097,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr6, r1, #30\n+\tlsrs\tr2, r3, #30\n \tmovs\tr2, r2\n-\tlsrs\tr2, r1, #30\n+\tlsrs\tr6, r2, #30\n \tmovs\tr2, r2\n-\tmovs\tr5, #202\t@ 0xca\n+\tmovs\tr5, #210\t@ 0xd2\n \tmovs\tr4, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr1, #52\t@ 0x34\n+\tcmp\tr1, #60\t@ 0x3c\n \tmovs\tr4, r2\n-\tcmp\tr1, #46\t@ 0x2e\n+\tcmp\tr1, #54\t@ 0x36\n \tmovs\tr4, r2\n-\tlsrs\tr2, r7, #23\n+\tlsrs\tr6, r0, #24\n \tmovs\tr2, r2\n-\tlsrs\tr6, r6, #23\n+\tlsrs\tr2, r0, #24\n \tmovs\tr2, r2\n-\tmovs\tr4, #54\t@ 0x36\n+\tmovs\tr4, #62\t@ 0x3e\n \tmovs\tr4, r2\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr.w\tr8, [pc, #812]\t@ 2c8b08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12acd4>\n \tadd.w\tr9, sp, #240\t@ 0xf0\n \tldr.w\tfp, [sp, #16]\n \tmov\tr0, r9\n \tmov\tr7, r6\n@@ -1435526,19 +1435526,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr0, r4, #18\n+\tlsrs\tr4, r5, #18\n \tmovs\tr2, r2\n-\tlsrs\tr4, r2, #18\n+\tlsrs\tr0, r4, #18\n \tmovs\tr2, r2\n-\tadds\tr4, #100\t@ 0x64\n+\tadds\tr4, #108\t@ 0x6c\n \tmovs\tr4, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1436607,31 +1436607,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr2, #46\t@ 0x2e\n+\tmovs\tr2, #54\t@ 0x36\n \tmovs\tr4, r2\n-\tmovs\tr2, #38\t@ 0x26\n+\tmovs\tr2, #46\t@ 0x2e\n \tmovs\tr4, r2\n-\tmovs\tr0, #84\t@ 0x54\n+\tmovs\tr0, #92\t@ 0x5c\n \tmovs\tr4, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tsubs\tr6, #136\t@ 0x88\n \tmovs\tr6, r3\n-\tsubs\tr4, r0, #1\n+\tsubs\tr4, r1, #1\n \tmovs\tr4, r2\n-\tsubs\tr2, r0, #1\n+\tsubs\tr2, r1, #1\n \tmovs\tr4, r2\n-\tbls.n\t2c92f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12b4c4>\n+\tbls.n\t2c9310 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12b4dc>\n \tmovs\tr1, r2\n Contig::editSingleDiscrepancyNoHAFTag(std::vector >&, unsigned char):\n ./src/mira/contig_edit.C:1014\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n \tldr.w\tr5, [pc, #1312]\t@ 2c9870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12ba3c>\n \tldr.w\tr4, [pc, #1312]\t@ 2c9874 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12ba40>\n@@ -1437328,15 +1437328,15 @@\n \tmovs\tr6, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr3, #242\t@ 0xf2\n \tmovs\tr6, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr6, r6, #5\n+\tadds\tr6, r7, #5\n \tmovs\tr4, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsls\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #19\n \tmovs\tr0, r0\n@@ -1437344,27 +1437344,27 @@\n \tmovs\tr0, r0\n \tlsls\tr0, r6, #30\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #13\n \tmovs\tr0, r0\n-\tsubs\tr2, r0, r5\n+\tsubs\tr2, r1, r5\n \tmovs\tr4, r2\n \tsubs\tr1, #88\t@ 0x58\n \tmovs\tr6, r3\n \tldrh\tr4, [r1, #42]\t@ 0x2a\n \tmovs\tr7, r3\n \tldrh\tr6, [r7, #38]\t@ 0x26\n \tmovs\tr7, r3\n-\tldr\tr6, [r3, #80]\t@ 0x50\n+\tldr\tr6, [r4, #80]\t@ 0x50\n \tmovs\tr3, r2\n-\tldrsb\tr0, [r7, r5]\n+\tldrsb\tr4, [r0, r6]\n \tmovs\tr2, r2\n-\tsubs\tr2, r3, #7\n+\tsubs\tr2, r4, #7\n \tmovs\tr4, r2\n ./src/mira/contig_edit.C:1108\n \tldr\tr1, [r1, #60]\t@ 0x3c\n \tcmp\tr1, #4\n \tbhi.n\t2c9996 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12bb62>\n ./src/mira/contig_edit.C:1103\n \tldr\tr1, [sp, #20]\n@@ -1438833,25 +1438833,25 @@\n \tadd\tsl, pc\n \tadd\tr8, pc\n \tb.n\t2ca410 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12c5dc>\n \tnop.w\n \t...\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tstrh\tr6, [r5, r0]\n+\tstrh\tr2, [r7, r0]\n \tmovs\tr2, r2\n-\tldc\t0, cr0, [r2], #-72\t@ 0xffffffb8\n+\tldc\t0, cr0, [sl], #-72\t@ 0xffffffb8\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadc.w\tr0, r0, r2, lsr #32\n-\tasrs\tr2, r0, #3\n+\tadc.w\tr0, r8, r2, lsr #32\n+\tasrs\tr2, r1, #3\n \tmovs\tr4, r2\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tsubs\tr7, #86\t@ 0x56\n \tmovs\tr6, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1438859,20 +1438859,20 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tand.w\tr0, r0, r2, lsr #32\n-\tstr\tr0, [r3, #20]\n+\tand.w\tr0, r8, r2, lsr #32\n+\tstr\tr0, [r4, #20]\n \tmovs\tr3, r2\n-\tasrs\tr6, r0, #17\n+\tasrs\tr6, r1, #17\n \tmovs\tr4, r2\n-\tldr\tr3, [pc, #816]\t@ (2ca730 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12c8fc>)\n+\tldr\tr3, [pc, #864]\t@ (2ca760 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12c92c>)\n \tmovs\tr2, r2\n \tvmov\tr0, s20\n \tmov\tr1, sl\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n \tcmp\tr5, r7\n \tbeq.w\t2cacaa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12ce76>\n@@ -1439315,39 +1439315,39 @@\n ./src/mira/contig_edit.C:1312 (discriminator 1)\n \tmov\tr0, fp\n \tbl\t1ac4a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0xe670>\n \tb.n\t2ca2f6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12c4c2>\n \tnop\n \tnop.w\n \t...\n-\tldr\tr3, [pc, #64]\t@ (2ca7f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12c9c0>)\n+\tldr\tr3, [pc, #112]\t@ (2ca824 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12c9f0>)\n \tmovs\tr2, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbkpt\t0x00a4\n+\tbkpt\t0x00ac\n \tmovs\tr2, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tpop\t{r1, r4, r7, pc}\n+\tpop\t{r1, r3, r4, r7, pc}\n \tmovs\tr2, r2\n-\tstcl\t0, cr0, [sl, #68]!\t@ 0x44\n-\tstcl\t0, cr0, [r6, #68]!\t@ 0x44\n-\tlsls\tr4, r4, #16\n+\tldcl\t0, cr0, [r6, #68]!\t@ 0x44\n+\tldcl\t0, cr0, [r2, #68]!\t@ 0x44\n+\tlsls\tr4, r5, #16\n \tmovs\tr4, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n ./src/mira/contig_edit.C:1174\n \tldr\tr1, [sp, #60]\t@ 0x3c\n \tmovs\tr6, #0\n \tstr\tr6, [r1, #0]\n@@ -1440231,17 +1440231,17 @@\n \tcmp\tr5, r2\n \tbeq.w\t2c9c9e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12be6a>\n ./src/mira/contig_edit.C:1186\n \tmovs\tr1, #4\n \tb.n\t2cae18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12cfe4>\n \tnop\n \t...\n-\tlsrs\tr6, r7, #32\n+\tlsrs\tr6, r0, #1\n \tmovs\tr4, r2\n-\tadds\tr4, #148\t@ 0x94\n+\tadds\tr4, #156\t@ 0x9c\n \tmovs\tr3, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsls\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #13\n \tmovs\tr0, r0\n@@ -1440251,17 +1440251,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrd\tr0, r0, [ip], #68\t@ 0x44\n-\tstrd\tr0, r0, [r8], #68\t@ 0x44\n-\tvqadd.u32\td0, d6, d3\n+\tldrd\tr0, r0, [r8], #68\t@ 0x44\n+\tldrd\tr0, r0, [r4], #68\t@ 0x44\n+\tvqadd.u32\td0, d14, d3\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n ./src/mira/contig_edit.C:1182\n@@ -1440897,15 +1440897,15 @@\n \tmovs\tr0, r0\n \tlsls\tr0, r6, #30\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #26\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #18\n \tmovs\tr0, r0\n-\tadds\tr1, #218\t@ 0xda\n+\tadds\tr1, #230\t@ 0xe6\n \tmovs\tr2, r2\n Contig::editTrickyOvercalls(bool, bool, std::vector >&):\n ./src/mira/contig_edit.C:456\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r0\n \tldr.w\tr4, [pc, #1156]\t@ 2cb830 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12d9fc>\n \tvpush\t{d8-d12}\n@@ -1441478,33 +1441478,33 @@\n \tmovs\tr6, r3\n \tsubs\tr4, r3, r6\n \tmovs\tr6, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n+\tstc2\t0, cr0, [r2, #76]\t@ 0x4c\n+\tldc2l\t0, cr0, [sl, #-76]!\t@ 0xffffffb4\n \tldc2l\t0, cr0, [sl, #-76]!\t@ 0xffffffb4\n-\tldc2l\t0, cr0, [r2, #-76]!\t@ 0xffffffb4\n-\tldc2l\t0, cr0, [r2, #-76]!\t@ 0xffffffb4\n-\tldc2l\t0, cr0, [r2], #-76\t@ 0xffffffb4\n+\tldc2l\t0, cr0, [sl], #-76\t@ 0xffffffb4\n \tldr\tr6, [r4, #112]\t@ 0x70\n \tmovs\tr7, r3\n \tldr\tr4, [r5, #108]\t@ 0x6c\n \tmovs\tr7, r3\n-\tldr\tr6, [pc, #640]\t@ (2cbadc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12dca8>)\n+\tldr\tr6, [pc, #672]\t@ (2cbafc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12dcc8>)\n \tmovs\tr3, r2\n-\tlsls\tr2, r1, #6\n+\tlsls\tr2, r2, #6\n \tmovs\tr4, r2\n-\tsubs\tr1, #16\n+\tsubs\tr1, #28\n \tmovs\tr2, r2\n-\tldr\tr5, [pc, #512]\t@ (2cba68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12dc34>)\n+\tldr\tr5, [pc, #544]\t@ (2cba88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12dc54>)\n \tmovs\tr3, r2\n-\tlsls\tr6, r5, #1\n+\tlsls\tr6, r6, #1\n \tmovs\tr4, r2\n-\tadds\tr7, #244\t@ 0xf4\n+\tsubs\tr0, #0\n \tmovs\tr2, r2\n \tvmov\tr0, s21\n \tblx\tb558 \n /usr/include/c++/10/bits/stl_vector.h:919\n \tldr\tr3, [sp, #16]\n \tmovw\tr0, #43691\t@ 0xaaab\n \tmovt\tr0, #43690\t@ 0xaaaa\n@@ -1443031,42 +1443031,42 @@\n \tmovs\tr0, r0\n \tldr\tr6, [r1, #56]\t@ 0x38\n \tmovs\tr7, r3\n \tldr\tr0, [r7, #48]\t@ 0x30\n \tmovs\tr7, r3\n \tldr\tr6, [r3, #48]\t@ 0x30\n \tmovs\tr7, r3\n-\tldrb.w\tr0, [sl, r3, lsl #1]\n-\tcmp\tr7, #68\t@ 0x44\n+\tstrh.w\tr0, [r2, r3, lsl #1]\n+\tcmp\tr7, #80\t@ 0x50\n \tmovs\tr2, r2\n \tasrs\tr0, r3, #32\n \tmovs\tr0, r0\n-\tadds\tr4, #48\t@ 0x30\n+\tadds\tr4, #60\t@ 0x3c\n \tmovs\tr2, r2\n-\tstmia\tr5!, {r1, r2, r4, r5, r6, r7}\n+\tstmia\tr5!, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr2, r2\n \tlsrs\tr2, r2, #28\n \tmovs\tr6, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd.w\tr0, r8, #19\n-\tlsls\tr4, r2, #9\n+\tadds.w\tr0, r0, #19\n+\tlsls\tr4, r3, #9\n \tmovs\tr3, r2\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tsubs\tr6, r6, #4\n \tmovs\tr6, r3\n \tstr\tr2, [r4, #20]\n \tmovs\tr7, r3\n-\tmrc\t0, 1, r0, cr14, cr3, {0}\n-\tmovs\tr5, #142\t@ 0x8e\n+\tmcr\t0, 2, r0, cr6, cr3, {0}\n+\tmovs\tr5, #154\t@ 0x9a\n \tmovs\tr2, r2\n \tstr\tr4, [r0, #16]\n \tmovs\tr7, r3\n-\tcmp\tr3, #74\t@ 0x4a\n+\tcmp\tr3, #86\t@ 0x56\n \tmovs\tr2, r2\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr9, sp, #512\t@ 0x200\n \tldr\tr5, [pc, #588]\t@ (2cc730 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12e8fc>)\n \tmov\tr0, r9\n \tadd\tr7, sp, #448\t@ 0x1c0\n \tblx\tbcc4 \n@@ -1443394,15 +1443394,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r2, r4, r6, r7}\n+\tstmia\tr5!, {r2, r3, r4, r6, r7}\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1444034,39 +1444034,39 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t2ccad8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12eca4>\n \tb.n\t2ccae6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12ecb2>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t2ccbc2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12ed8e>\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tlsrs\tr2, r5, #1\n+\tlsrs\tr2, r6, #1\n \tmovs\tr3, r2\n-\tstrb\tr2, [r4, #11]\n+\tstrb\tr2, [r5, #11]\n \tmovs\tr5, r2\n-\tlsrs\tr2, r6, #32\n+\tlsrs\tr2, r7, #32\n \tmovs\tr3, r2\n-\tb.n\t2ccbe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12edac>\n+\tb.n\t2ccbf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12edbc>\n \tmovs\tr3, r2\n-\tb.n\t2ccbcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12ed98>\n+\tb.n\t2ccbdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12eda8>\n \tmovs\tr3, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #18\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #736\t@ (adr r1, 2ccee8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f0b4>)\n+\tadd\tr1, pc, #784\t@ (adr r1, 2ccf18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f0e4>)\n \tmovs\tr1, r2\n-\tadd\tr1, pc, #720\t@ (adr r1, 2ccedc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f0a8>)\n+\tadd\tr1, pc, #768\t@ (adr r1, 2ccf0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f0d8>)\n \tmovs\tr1, r2\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tadds\tr0, r7, r5\n+\tadds\tr4, r0, r6\n \tmovs\tr2, r2\n \tldr\tr2, [r4, r6]\n \tmovs\tr7, r3\n \tldr\tr4, [r7, r5]\n \tmovs\tr7, r3\n Contig::deleteStarOnlyColumns(int, int, bool, unsigned int):\n ./src/mira/contig_edit.C:284\n@@ -1444885,37 +1444885,37 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbnz\tr4, 2cd28c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f458>\n+\tcbnz\tr4, 2cd28e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f45a>\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr1, sp, #736\t@ 0x2e0\n+\tadd\tr1, sp, #768\t@ 0x300\n \tmovs\tr2, r2\n-\tb.n\t2cd4f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f6bc>\n+\tb.n\t2cd500 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f6cc>\n \tmovs\tr3, r2\n-\tb.n\t2cd400 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f5cc>\n+\tb.n\t2cd410 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f5dc>\n \tmovs\tr3, r2\n-\tb.n\t2cd3e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f5b4>\n+\tb.n\t2cd3f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f5c4>\n \tmovs\tr3, r2\n-\tmovs\tr2, #38\t@ 0x26\n+\tmovs\tr2, #46\t@ 0x2e\n \tmovs\tr3, r2\n-\tb.n\t2cd41c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f5e8>\n+\tb.n\t2cd42c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f5f8>\n \tmovs\tr3, r2\n-\tstmia\tr4!, {r5, r6, r7}\n+\tstmia\tr4!, {r3, r5, r6, r7}\n \tmovs\tr3, r2\n-\tb.n\t2cd2cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f498>\n+\tb.n\t2cd2dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f4a8>\n \tmovs\tr3, r2\n /usr/include/boost/iterator/iterator_facade.hpp:550\n \tmov\tr0, r4\n \tbl\t1c16c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x23890>\n ./src/mira/contig_edit.C:357\n \tldr\tr5, [r0, #8]\n /usr/include/boost/iterator/iterator_facade.hpp:550\n@@ -1445567,15 +1445567,15 @@\n \tb.n\t2cd6ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f878>\n \tb.n\t2cd660 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f82c>\n \tb.n\t2cd666 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f832>\n \tb.n\t2cd6ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f878>\n \tnop\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tble.n\t2cd628 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f7f4>\n+\tble.n\t2cd638 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12f804>\n \tmovs\tr3, r2\n \tlsrs\tr0, r1, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1446337,15 +1446337,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t2cdca2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12fe6e>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2cdcd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12fe9c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\t\t\t@ instruction: 0xb888\n+\t\t\t@ instruction: 0xb894\n \tmovs\tr1, r2\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, Contig::edit454command_t&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr2, #43691\t@ 0xaaab\n@@ -1446643,15 +1446643,15 @@\n \tstmia.w\tr4, {r0, r1}\n \tb.n\t2cdd74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x12ff40>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2cdfd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1301a4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrh\tr4, [r2, #34]\t@ 0x22\n+\tldrh\tr0, [r4, #34]\t@ 0x22\n \tmovs\tr1, r2\n std::_Hashtable, std::__detail::_Identity, std::equal_to, std::hash, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_rehash(unsigned int, unsigned int const&):\n /usr/include/c++/10/bits/hashtable.h:392\n \tcmp\tr1, #1\n /usr/include/c++/10/bits/hashtable.h:2064\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/hashtable.h:394\n@@ -1447454,15 +1447454,15 @@\n \tb.n\t2ce52a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1306f6>\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #8]\t@ (2ce584 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x130750>)\n \tadd\tr0, pc\n \tblx\tb6dc \n /usr/include/c++/10/ext/new_allocator.h:106\n \tblx\tb0c8 \n-\tldrh\tr2, [r2, #14]\n+\tldrh\tr6, [r3, #14]\n \tmovs\tr1, r2\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter > >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >):\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr7, r2\n /usr/include/c++/10/bits/stl_iterator.h:1205\n \tsubs\tr2, r1, r0\n@@ -1450913,15 +1450913,15 @@\n \tstmia.w\tr4, {r0, r1, r2}\n \tb.n\t2cfe8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x132058>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2d00ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1322b8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldr\tr0, [r0, #52]\t@ 0x34\n+\tldr\tr4, [r1, #52]\t@ 0x34\n \tmovs\tr1, r2\n void std::__push_heap<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse > >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tsub\tsp, #8\n /usr/include/c++/10/bits/stl_heap.h:139\n \tcmp\tr1, r2\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -1451561,15 +1451561,15 @@\n \tadd.w\tr5, r7, #8\n \tstmia.w\tr9, {r0, r1}\n \tb.n\t2d0488 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x132654>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (2d05e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1327ac>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstr\tr2, [r1, #100]\t@ 0x64\n+\tstr\tr6, [r2, #100]\t@ 0x64\n \tmovs\tr1, r2\n void std::__move_median_to_first >(Contig::edit454command_t*, Contig::edit454command_t*, Contig::edit454command_t*, Contig::edit454command_t*, __gnu_cxx::__ops::_Iter_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:79\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr8, r1\n \tmov\tr5, r3\n \tsub\tsp, #24\n@@ -1488847,31 +1488847,31 @@\n \tadd\tr3, pc\n \tb.n\t2e3ae6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x145cb2>\n /usr/include/c++/10/bits/basic_string.h:323\n \tldr\tr0, [pc, #40]\t@ (2e3b78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x145d44>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrb\tr6, [r7, #0]\n+\tldrb\tr6, [r0, #1]\n \tmovs\tr2, r2\n-\tldrb\tr6, [r4, #0]\n+\tldrb\tr6, [r5, #0]\n \tmovs\tr2, r2\n-\tstrb\tr0, [r1, #31]\n+\tstrb\tr0, [r2, #31]\n \tmovs\tr2, r2\n-\tstrb\tr2, [r3, #31]\n+\tstrb\tr2, [r4, #31]\n \tmovs\tr2, r2\n-\tstrb\tr2, [r2, #30]\n+\tstrb\tr2, [r3, #30]\n \tmovs\tr2, r2\n-\tstrb\tr2, [r7, #30]\n+\tstrb\tr2, [r0, #31]\n \tmovs\tr2, r2\n-\tstrb\tr4, [r1, #30]\n+\tstrb\tr4, [r2, #30]\n \tmovs\tr2, r2\n-\tstrb\tr6, [r5, #29]\n+\tstrb\tr6, [r6, #29]\n \tmovs\tr2, r2\n-\tldr\tr7, [pc, #720]\t@ (2e3e4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x146018>)\n+\tldr\tr7, [pc, #768]\t@ (2e3e7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x146048>)\n \tmovs\tr0, r2\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n@@ -1490237,19 +1490237,19 @@\n \t...\n \tstr\tr2, [sp, #864]\t@ 0x360\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr2, [sp, #800]\t@ 0x320\n \tmovs\tr4, r3\n-\tcmp\tr7, #146\t@ 0x92\n+\tcmp\tr7, #154\t@ 0x9a\n \tmovs\tr2, r2\n \tlsls\tr0, r5, #24\n \tmovs\tr0, r0\n-\tcmp\tr7, #62\t@ 0x3e\n+\tcmp\tr7, #70\t@ 0x46\n \tmovs\tr2, r2\n \tlsrs\tr0, r4, #2\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #27\n \tmovs\tr0, r0\n \tlsls\tr4, r1, #29\n \tmovs\tr0, r0\n@@ -1490273,35 +1490273,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tstrb\tr2, [r6, #23]\n+\tstrb\tr2, [r7, #23]\n \tmovs\tr1, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr0, #194\t@ 0xc2\n+\tmovs\tr0, #202\t@ 0xca\n \tmovs\tr1, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tmovs\tr0, #28\n+\tmovs\tr0, #36\t@ 0x24\n \tmovs\tr1, r2\n /usr/include/c++/10/bits/stl_vector.h:919\n \tsubs\tr6, r2, r0\n ./src/mira/contig_featureinfo.C:106\n \tasrs\tr1, r6, #1\n \tbeq.w\t2e5952 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x147b1e>\n \tsub.w\tlr, r0, #2\n@@ -1491418,15 +1491418,15 @@\n \tb.n\t2e4f6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x147138>\n \tnop.w\n \t...\n \tlsls\tr0, r4, #22\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n-\tldr\tr4, [r3, #60]\t@ 0x3c\n+\tldr\tr4, [r4, #60]\t@ 0x3c\n \tmovs\tr2, r2\n \tlsls\tr0, r5, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #28\n \tmovs\tr0, r0\n \tlsls\tr4, r0, #29\n \tmovs\tr0, r0\n@@ -1491436,15 +1491436,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r6, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #17\n \tmovs\tr0, r0\n-\tldr\tr4, [r0, #44]\t@ 0x2c\n+\tldr\tr4, [r1, #44]\t@ 0x2c\n \tmovs\tr2, r2\n \tlsrs\tr0, r4, #19\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #2\n \tmovs\tr0, r0\n \tlsls\tr4, r4, #28\n \tmovs\tr0, r0\n@@ -1491462,19 +1491462,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #6\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #26\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #968]\t@ (2e52dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1474a8>)\n+\tldr\tr2, [pc, #1016]\t@ (2e530c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1474d8>)\n \tmovs\tr0, r2\n-\tldr\tr2, [pc, #944]\t@ (2e52c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x147494>)\n+\tldr\tr2, [pc, #992]\t@ (2e52f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1474c4>)\n \tmovs\tr0, r2\n-\tstr\tr2, [r5, #16]\n+\tstr\tr2, [r6, #16]\n \tmovs\tr2, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1491490,21 +1491490,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbx\tr6\n+\tbxns\tr7\n \tmovs\tr0, r2\n-\tbxns\tr5\n+\tbx\tr7\n \tmovs\tr0, r2\n-\tldrb\tr4, [r5, r5]\n+\tldrb\tr4, [r6, r5]\n \tmovs\tr2, r2\n-\tcmp\tr1, #182\t@ 0xb6\n+\tcmp\tr1, #190\t@ 0xbe\n \tmovs\tr2, r2\n ./src/mira/contig_featureinfo.C:219\n \tldr.w\tr1, [r9]\n \tldrsb\tr3, [r1, r7]\n \tcbz\tr3, 2e4fac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x147178>\n ./src/mira/contig_featureinfo.C:248\n \tldr\tr2, [sp, #24]\n@@ -1493291,85 +1493291,85 @@\n \tb.n\t2e5bda , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x147da6>\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tstr\tr6, [r0, #12]\n+\tstr\tr6, [r1, #12]\n \tmovs\tr2, r2\n-\tadds\tr4, r1, r7\n+\tadds\tr4, r2, r7\n \tmovs\tr2, r2\n-\tadds\tr2, r6, r2\n+\tadds\tr6, r7, r2\n \tmovs\tr0, r2\n-\tadds\tr6, r5, r2\n+\tadds\tr2, r7, r2\n \tmovs\tr0, r2\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr3, #134\t@ 0x86\n+\tmovs\tr3, #142\t@ 0x8e\n \tmovs\tr2, r2\n-\tldrsh\tr0, [r1, r1]\n+\tldrsh\tr0, [r2, r1]\n \tmovs\tr2, r2\n-\tldrsh\tr2, [r1, r1]\n+\tldrsh\tr2, [r2, r1]\n \tmovs\tr2, r2\n-\tldrb\tr2, [r6, r7]\n+\tldrb\tr2, [r7, r7]\n \tmovs\tr2, r2\n-\tldrb\tr0, [r6, r7]\n+\tldrb\tr0, [r7, r7]\n \tmovs\tr2, r2\n-\tldrb\tr4, [r4, r7]\n+\tldrb\tr4, [r5, r7]\n \tmovs\tr2, r2\n-\tldrb\tr6, [r3, r7]\n+\tldrb\tr6, [r4, r7]\n \tmovs\tr2, r2\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n-\tasrs\tr2, r5, #15\n+\tasrs\tr6, r6, #15\n \tmovs\tr0, r2\n-\tasrs\tr4, r4, #15\n+\tasrs\tr0, r6, #15\n \tmovs\tr0, r2\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n-\tsubs\tr4, #142\t@ 0x8e\n+\tsubs\tr4, #154\t@ 0x9a\n \tmovs\tr0, r2\n-\tsubs\tr4, #130\t@ 0x82\n+\tsubs\tr4, #142\t@ 0x8e\n \tmovs\tr0, r2\n-\tstr\tr0, [r2, #68]\t@ 0x44\n+\tstr\tr0, [r3, #68]\t@ 0x44\n \tmovs\tr2, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tasrs\tr2, r5, #12\n+\tasrs\tr2, r6, #12\n \tmovs\tr2, r2\n-\tasrs\tr2, r2, #12\n+\tasrs\tr2, r3, #12\n \tmovs\tr2, r2\n-\tldr\tr6, [r3, r5]\n+\tldr\tr6, [r4, r5]\n \tmovs\tr2, r2\n-\tsubs\tr3, #50\t@ 0x32\n+\tsubs\tr3, #62\t@ 0x3e\n \tmovs\tr0, r2\n-\tsubs\tr3, #38\t@ 0x26\n+\tsubs\tr3, #50\t@ 0x32\n \tmovs\tr0, r2\n-\tstr\tr6, [r6, #44]\t@ 0x2c\n+\tstr\tr6, [r7, #44]\t@ 0x2c\n \tmovs\tr2, r2\n-\tldrd\tr0, r0, [r4, #-68]\t@ 0x44\n-\tldmdb\tr2, {r0, r4}\n-\tldrsb\tr2, [r6, r6]\n+\tldrd\tr0, r0, [ip, #-68]\t@ 0x44\n+\tldmdb\tsl, {r0, r4}\n+\tldrsb\tr2, [r7, r6]\n \tmovs\tr2, r2\n-\tcmp\tr7, #62\t@ 0x3e\n+\tcmp\tr7, #74\t@ 0x4a\n \tmovs\tr0, r2\n ./src/mira/contig_featureinfo.C:273\n \tmov\tr0, r8\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n ./src/mira/contig_featureinfo.C:272\n \tmov\tr0, r6\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n@@ -1494976,15 +1494976,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tlsls\tr0, r5, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #13\n \tmovs\tr0, r0\n-\tstr\tr6, [r4, r4]\n+\tstr\tr6, [r5, r4]\n \tmovs\tr2, r2\n \tstmia\tr1!, {r2, r3, r6}\n \tmovs\tr5, r3\n \tstmia\tr1!, {r1, r3, r6}\n \tmovs\tr5, r3\n \tite\tle\n \tmovle\tr5, r3\n@@ -1496647,35 +1496647,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa2e0010\n+\t\t\t@ instruction: 0xfa360010\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tstr\tr6, [r4, #48]\t@ 0x30\n \tmovs\tr4, r3\n \tlsrs\tr4, r6, #3\n \tmovs\tr0, r0\n-\trsbs\tr0, ip, #9437184\t@ 0x900000\n-\tmovs\tr3, #244\t@ 0xf4\n+\t\t\t@ instruction: 0xf5e40010\n+\tmovs\tr4, #0\n \tmovs\tr0, r2\n-\tmovs\tr3, #238\t@ 0xee\n+\tmovs\tr3, #250\t@ 0xfa\n \tmovs\tr0, r2\n-\tsubs\tr2, #46\t@ 0x2e\n+\tsubs\tr2, #54\t@ 0x36\n \tmovs\tr2, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\taddw\tr0, sl, #16\n+\t\t\t@ instruction: 0xf2120010\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr4, [pc, #660]\t@ (2e7658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x149824>)\n \tmov\tsl, r8\n \tadd\tr7, sp, #200\t@ 0xc8\n \tmov\tr8, r0\n@@ -1497004,28 +1497004,28 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr0, #144\t@ 0x90\n+\tmovs\tr0, #156\t@ 0x9c\n \tmovs\tr0, r2\n-\tmovs\tr0, #138\t@ 0x8a\n+\tmovs\tr0, #150\t@ 0x96\n \tmovs\tr0, r2\n-\tadds\tr6, #202\t@ 0xca\n+\tadds\tr6, #210\t@ 0xd2\n \tmovs\tr2, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovw\tr0, #43023\t@ 0xa80f\n-\tmovw\tr0, #18447\t@ 0x480f\n+\t\t\t@ instruction: 0xf656000f\n+\t\t\t@ instruction: 0xf650000f\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr5, [pc, #860]\t@ (2e79f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x149bbc>)\n \tadd\tr6, sp, #200\t@ 0xc8\n \tmov\tr0, r6\n \tvmov\tfp, s16\n@@ -1497448,34 +1497448,34 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstc\t0, cr0, [ip, #-64]\t@ 0xffffffc0\n+\tldc\t0, cr0, [r4, #-64]\t@ 0xffffffc0\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr6, r0, #3\n+\tadds\tr2, r2, #3\n \tmovs\tr0, r2\n-\tadds\tr0, r0, #3\n+\tadds\tr4, r1, #3\n \tmovs\tr0, r2\n-\tadds\tr3, #0\n+\tadds\tr3, #8\n \tmovs\tr2, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n-\tsubs\tr2, #76\t@ 0x4c\n+\tsubs\tr2, #84\t@ 0x54\n \tmovs\tr2, r2\n-\tsubs\tr2, #94\t@ 0x5e\n+\tsubs\tr2, #102\t@ 0x66\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr7, sp, #200\t@ 0xc8\n \tmov\tsl, r8\n \tmov\tr0, r7\n@@ -1497867,17 +1497867,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr1, #100\t@ 0x64\n+\tsubs\tr1, #108\t@ 0x6c\n \tmovs\tr2, r2\n-\tsubs\tr0, #242\t@ 0xf2\n+\tsubs\tr0, #250\t@ 0xfa\n \tmovs\tr2, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tb.n\t2e82dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14a4a8>\n \tmovs\tr7, r1\n@@ -1498005,18 +1498005,18 @@\n \tadd\tr1, pc\n \tblx\tbb30 , std::allocator >::compare(char const*) const@plt>\n ./src/mira/contig.H:1005\n \tclz\tr2, r0\n \tlsrs\tr0, r2, #5\n \tb.n\t2e7d86 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x149f52>\n \tnop\n-\tadds\tr6, #194\t@ 0xc2\n+\tadds\tr6, #202\t@ 0xca\n \tmovs\tr2, r2\n-\tldr.w\tr0, [r4, #17]\n-\tstr.w\tr0, [r0, #17]\n+\tldr.w\tr0, [ip, #17]\n+\tstr.w\tr0, [r8, #17]\n gbfsummary_t::~gbfsummary_t():\n /usr/include/c++/10/bits/basic_string.h:203\n \tadd.w\tr3, r0, #176\t@ 0xb0\n ./src/mira/contig.H:54\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/basic_string.h:187\n@@ -1499936,70 +1499936,70 @@\n \tmovs\tr0, r0\n \tblxns\tsl\n \tmovs\tr4, r3\n \tlsls\tr4, r0, #26\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr4, #244\t@ 0xf4\n+\tcmp\tr4, #252\t@ 0xfc\n \tmovs\tr2, r2\n-\tcmp\tr5, #26\n+\tcmp\tr5, #34\t@ 0x22\n \tmovs\tr2, r2\n-\tcmp\tr5, #2\n+\tcmp\tr5, #10\n \tmovs\tr2, r2\n-\tble.n\t2e8ac4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ac90>\n+\tble.n\t2e8adc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14aca8>\n \tmovs\tr7, r1\n-\tsubs\tr3, #172\t@ 0xac\n+\tsubs\tr3, #180\t@ 0xb4\n \tmovs\tr2, r2\n-\tcmp\tr4, #188\t@ 0xbc\n+\tcmp\tr4, #196\t@ 0xc4\n \tmovs\tr2, r2\n-\tcmp\tr4, #156\t@ 0x9c\n+\tcmp\tr4, #164\t@ 0xa4\n \tmovs\tr2, r2\n-\tstrb\tr4, [r0, r4]\n+\tstrb\tr4, [r1, r4]\n \tmovs\tr1, r2\n-\tcmp\tr3, #244\t@ 0xf4\n+\tcmp\tr3, #252\t@ 0xfc\n \tmovs\tr2, r2\n-\tcmp\tr3, #218\t@ 0xda\n+\tcmp\tr3, #226\t@ 0xe2\n \tmovs\tr2, r2\n-\tcmp\tr3, #174\t@ 0xae\n+\tcmp\tr3, #182\t@ 0xb6\n \tmovs\tr2, r2\n-\tcmp\tr3, #168\t@ 0xa8\n+\tcmp\tr3, #176\t@ 0xb0\n \tmovs\tr2, r2\n-\tcmp\tr3, #148\t@ 0x94\n+\tcmp\tr3, #156\t@ 0x9c\n \tmovs\tr2, r2\n-\tsubs\tr4, #178\t@ 0xb2\n+\tsubs\tr4, #186\t@ 0xba\n \tmovs\tr2, r2\n-\tsubs\tr4, #164\t@ 0xa4\n+\tsubs\tr4, #172\t@ 0xac\n \tmovs\tr2, r2\n-\tsubs\tr4, #150\t@ 0x96\n+\tsubs\tr4, #158\t@ 0x9e\n \tmovs\tr2, r2\n-\tsubs\tr4, #136\t@ 0x88\n+\tsubs\tr4, #144\t@ 0x90\n \tmovs\tr2, r2\n-\tcmp\tr3, #66\t@ 0x42\n+\tcmp\tr3, #74\t@ 0x4a\n \tmovs\tr2, r2\n-\tcmp\tr3, #56\t@ 0x38\n+\tcmp\tr3, #64\t@ 0x40\n \tmovs\tr2, r2\n-\tsubs\tr4, #86\t@ 0x56\n+\tsubs\tr4, #94\t@ 0x5e\n \tmovs\tr2, r2\n-\tsmmlsr\tr0, sl, r0, r0\n-\tcmp\tr3, #14\n+\t\t\t@ instruction: 0xfb720010\n+\tcmp\tr3, #22\n \tmovs\tr2, r2\n-\tcmp\tr3, #16\n+\tcmp\tr3, #24\n \tmovs\tr2, r2\n-\tcmp\tr3, #8\n+\tcmp\tr3, #16\n \tmovs\tr2, r2\n-\tite\tvs\n-\tmovvs\tr3, r2\n-\taddvc\tr4, lr\n+\tite\tvc\n+\tmovvc\tr3, r2\n+\taddvs\tr4, lr\n \tmovs\tr4, r3\n-\tcmp\tr2, #134\t@ 0x86\n+\tcmp\tr2, #142\t@ 0x8e\n \tmovs\tr2, r2\n-\tcmp\tr1, #66\t@ 0x42\n+\tcmp\tr1, #74\t@ 0x4a\n \tmovs\tr2, r2\n-\tcmp\tr1, #80\t@ 0x50\n+\tcmp\tr1, #88\t@ 0x58\n \tmovs\tr2, r2\n Contig::priv_dumpAsTCS(std::ostream&):\n ./src/mira/contig_output.C:755\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr3, #0\n ./src/mira/contig_output.C:755\n@@ -1500074,26 +1500074,26 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tmuls\tr2, r5\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr1, #226\t@ 0xe2\n+\tcmp\tr1, #234\t@ 0xea\n \tmovs\tr2, r2\n \torrs\tr4, r5\n \tmovs\tr4, r3\n Contig::dumpContigReadList_Head(std::ostream&):\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #8]\t@ (2e8c7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ae48>)\n \tmovs\tr2, #22\n \tadd\tr1, pc\n \tb.w\tb994 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt>\n \tnop\n-\tcmp\tr1, #180\t@ 0xb4\n+\tcmp\tr1, #188\t@ 0xbc\n \tmovs\tr2, r2\n Contig::dumpContigStatistics_Head(std::ostream&):\n ./src/mira/contig_output.C:1845\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/ios_base.h:754\n \tmovs\tr6, #20\n /usr/include/c++/10/iomanip:240\n@@ -1500127,17 +1500127,17 @@\n \tmovs\tr2, #81\t@ 0x51\n ./src/mira/contig_output.C:1848\n \tldmia.w\tsp!, {r4, r5, r6, lr}\n /usr/include/c++/10/ostream:611\n \tadd\tr1, pc\n \tb.w\tb994 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt>\n \tnop\n-\tcmp\tr1, #176\t@ 0xb0\n+\tcmp\tr1, #184\t@ 0xb8\n \tmovs\tr2, r2\n-\tcmp\tr1, #140\t@ 0x8c\n+\tcmp\tr1, #148\t@ 0x94\n \tmovs\tr2, r2\n Contig::dumpContigStatistics_Body(std::ostream&):\n ./src/mira/contig_output.C:1858\n \tldr\tr2, [pc, #464]\t@ (2e8ea0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b06c>)\n \tldr\tr3, [pc, #468]\t@ (2e8ea4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b070>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1500389,17 +1500389,17 @@\n \tmov\tr0, r4\n \tmovs\tr2, #2\n ./src/mira/contig_output.C:1905\n \tldmia.w\tsp!, {r3, r4, r5, lr}\n /usr/include/c++/10/ostream:611\n \tb.w\tb994 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt>\n \tnop\n-\tmovs\tr7, #136\t@ 0x88\n+\tmovs\tr7, #144\t@ 0x90\n \tmovs\tr2, r2\n-\tmovs\tr7, #218\t@ 0xda\n+\tmovs\tr7, #226\t@ 0xe2\n \tmovs\tr2, r2\n Contig::dumpConsensusTagList_Head(std::ostream&):\n ./src/mira/contig_output.C:1954\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #76]\t@ (2e8f34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b100>)\n@@ -1500443,15 +1500443,15 @@\n \tbeq.n\t2e8f06 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b0d2>\n \tmov\tr0, r5\n \tblx\tr2\n \tmov\tr1, r0\n \tb.n\t2e8f06 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b0d2>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n-\tcmp\tr0, #50\t@ 0x32\n+\tcmp\tr0, #58\t@ 0x3a\n \tmovs\tr2, r2\n \teors\tr6, r5\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Contig::dumpMAF_Head(std::ostream&):\n /usr/include/c++/10/ostream:611\n@@ -1500468,17 +1500468,17 @@\n \tmovs\tr2, #17\n ./src/mira/contig_output.C:2034\n \tldmia.w\tsp!, {r4, lr}\n /usr/include/c++/10/ostream:611\n \tadd\tr1, pc\n \tb.w\tb994 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt>\n \tnop\n-\tcmp\tr0, #68\t@ 0x44\n+\tcmp\tr0, #76\t@ 0x4c\n \tmovs\tr2, r2\n-\tcmp\tr0, #68\t@ 0x44\n+\tcmp\tr0, #76\t@ 0x4c\n \tmovs\tr2, r2\n Contig::dumpTCS_Head(std::ostream&):\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #560]\t@ (2e919c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b368>)\n \tmovs\tr2, #10\n ./src/mira/contig_output.C:2045\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n@@ -1500820,59 +1500820,59 @@\n \tbeq.n\t2e916c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b338>\n \tmov\tr0, r7\n \tblx\tr5\n \tmov\tr1, r0\n \tb.n\t2e916c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b338>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n-\tcmp\tr0, #62\t@ 0x3e\n+\tcmp\tr0, #70\t@ 0x46\n \tmovs\tr2, r2\n-\tmovs\tr6, #190\t@ 0xbe\n+\tmovs\tr6, #198\t@ 0xc6\n \tmovs\tr2, r2\n-\tcmp\tr0, #38\t@ 0x26\n+\tcmp\tr0, #46\t@ 0x2e\n \tmovs\tr2, r2\n-\tcmp\tr0, #128\t@ 0x80\n+\tcmp\tr0, #136\t@ 0x88\n \tmovs\tr2, r2\n \tsubs\tr7, #192\t@ 0xc0\n \tmovs\tr4, r3\n-\tmovs\tr7, #244\t@ 0xf4\n+\tmovs\tr7, #252\t@ 0xfc\n+\tmovs\tr2, r2\n+\tmovs\tr7, #214\t@ 0xd6\n \tmovs\tr2, r2\n \tmovs\tr7, #206\t@ 0xce\n \tmovs\tr2, r2\n-\tmovs\tr7, #198\t@ 0xc6\n+\tmovs\tr7, #202\t@ 0xca\n \tmovs\tr2, r2\n \tmovs\tr7, #194\t@ 0xc2\n \tmovs\tr2, r2\n-\tmovs\tr7, #186\t@ 0xba\n+\tmovs\tr7, #174\t@ 0xae\n \tmovs\tr2, r2\n-\tmovs\tr7, #166\t@ 0xa6\n+\tmovs\tr7, #168\t@ 0xa8\n \tmovs\tr2, r2\n-\tmovs\tr7, #160\t@ 0xa0\n+\tmovs\tr7, #150\t@ 0x96\n \tmovs\tr2, r2\n-\tmovs\tr7, #142\t@ 0x8e\n+\tmovs\tr7, #136\t@ 0x88\n \tmovs\tr2, r2\n-\tmovs\tr7, #128\t@ 0x80\n+\tmovs\tr7, #124\t@ 0x7c\n \tmovs\tr2, r2\n-\tmovs\tr7, #116\t@ 0x74\n+\tmovs\tr7, #102\t@ 0x66\n \tmovs\tr2, r2\n-\tmovs\tr7, #94\t@ 0x5e\n-\tmovs\tr2, r2\n-\tmovs\tr7, #76\t@ 0x4c\n+\tmovs\tr7, #84\t@ 0x54\n \tmovs\tr2, r2\n-\tmovs\tr7, #60\t@ 0x3c\n+\tmovs\tr7, #68\t@ 0x44\n \tmovs\tr2, r2\n-\tmovs\tr7, #40\t@ 0x28\n+\tmovs\tr7, #48\t@ 0x30\n \tmovs\tr2, r2\n-\tmovs\tr7, #22\n+\tmovs\tr7, #30\n \tmovs\tr2, r2\n-\tldrh\tr4, [r7, #22]\n+\tldrh\tr4, [r0, #24]\n \tmovs\tr3, r2\n-\tmovs\tr6, #234\t@ 0xea\n+\tmovs\tr6, #242\t@ 0xf2\n \tmovs\tr2, r2\n-\tmovs\tr7, #110\t@ 0x6e\n+\tmovs\tr7, #118\t@ 0x76\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Contig::dumpTCS_Body(std::ostream&):\n ./src/mira/contig_output.C:2078\n \tpush\t{r4, r5, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n@@ -1500949,15 +1500949,15 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tsubs\tr5, #86\t@ 0x56\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr3, #206\t@ 0xce\n+\tmovs\tr3, #214\t@ 0xd6\n \tmovs\tr2, r2\n \tsubs\tr5, #24\n \tmovs\tr4, r3\n Contig::dumpWiggle_Head(std::ostream&):\n ./src/mira/contig_output.C:2091\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n@@ -1501003,15 +1501003,15 @@\n \tbeq.n\t2e92aa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b476>\n \tmov\tr0, r5\n \tblx\tr2\n \tmov\tr1, r0\n \tb.n\t2e92aa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b476>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n-\tmovs\tr5, #174\t@ 0xae\n+\tmovs\tr5, #182\t@ 0xb6\n \tmovs\tr2, r2\n \tsubs\tr4, #202\t@ 0xca\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Contig::dumpStatus(std::ostream&):\n ./src/mira/contig_output.C:2467\n@@ -1501932,93 +1501932,93 @@\n \tmov\tr0, r5\n \tadd\tr1, pc\n \tbl\t2e85d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14a79c>\n \tb.n\t2e936e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14b53a>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n-\tmovs\tr5, #204\t@ 0xcc\n+\tmovs\tr5, #212\t@ 0xd4\n \tmovs\tr2, r2\n-\tadd\tr1, sp, #304\t@ 0x130\n+\tadd\tr1, sp, #336\t@ 0x150\n \tmovs\tr3, r2\n \tsubs\tr4, #42\t@ 0x2a\n \tmovs\tr4, r3\n-\tmovs\tr5, #144\t@ 0x90\n-\tmovs\tr2, r2\n \tmovs\tr5, #152\t@ 0x98\n \tmovs\tr2, r2\n-\tmovs\tr5, #158\t@ 0x9e\n+\tmovs\tr5, #160\t@ 0xa0\n \tmovs\tr2, r2\n-\tmovs\tr5, #142\t@ 0x8e\n+\tmovs\tr5, #166\t@ 0xa6\n \tmovs\tr2, r2\n-\tmovs\tr5, #130\t@ 0x82\n+\tmovs\tr5, #150\t@ 0x96\n \tmovs\tr2, r2\n-\tmovs\tr5, #126\t@ 0x7e\n+\tmovs\tr5, #138\t@ 0x8a\n \tmovs\tr2, r2\n-\tmovs\tr5, #114\t@ 0x72\n+\tmovs\tr5, #134\t@ 0x86\n \tmovs\tr2, r2\n-\tldr\tr1, [pc, #776]\t@ (2e9d00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14becc>)\n+\tmovs\tr5, #122\t@ 0x7a\n+\tmovs\tr2, r2\n+\tldr\tr1, [pc, #808]\t@ (2e9d20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14beec>)\n \tmovs\tr1, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr4, #232\t@ 0xe8\n+\tmovs\tr4, #240\t@ 0xf0\n \tmovs\tr2, r2\n-\tmovs\tr4, #210\t@ 0xd2\n+\tmovs\tr4, #218\t@ 0xda\n \tmovs\tr2, r2\n-\tmovs\tr4, #198\t@ 0xc6\n+\tmovs\tr4, #206\t@ 0xce\n \tmovs\tr2, r2\n-\tmovs\tr4, #198\t@ 0xc6\n+\tmovs\tr4, #206\t@ 0xce\n \tmovs\tr2, r2\n-\tmovs\tr4, #198\t@ 0xc6\n+\tmovs\tr4, #206\t@ 0xce\n \tmovs\tr2, r2\n-\tmovs\tr4, #198\t@ 0xc6\n+\tmovs\tr4, #206\t@ 0xce\n \tmovs\tr2, r2\n-\tmovs\tr4, #188\t@ 0xbc\n+\tmovs\tr4, #196\t@ 0xc4\n \tmovs\tr2, r2\n-\tmovs\tr4, #230\t@ 0xe6\n+\tmovs\tr4, #238\t@ 0xee\n \tmovs\tr2, r2\n-\tmovs\tr4, #184\t@ 0xb8\n+\tmovs\tr4, #192\t@ 0xc0\n \tmovs\tr2, r2\n-\tmovs\tr4, #174\t@ 0xae\n+\tmovs\tr4, #182\t@ 0xb6\n \tmovs\tr2, r2\n-\tmovs\tr4, #148\t@ 0x94\n+\tmovs\tr4, #156\t@ 0x9c\n \tmovs\tr2, r2\n-\tmovs\tr4, #140\t@ 0x8c\n+\tmovs\tr4, #148\t@ 0x94\n \tmovs\tr2, r2\n-\tmovs\tr4, #126\t@ 0x7e\n+\tmovs\tr4, #134\t@ 0x86\n \tmovs\tr2, r2\n-\tmovs\tr4, #122\t@ 0x7a\n+\tmovs\tr4, #130\t@ 0x82\n \tmovs\tr2, r2\n-\tbx\tpc\n+\t\t\t@ instruction: 0x4782\n \tmovs\tr1, r2\n-\tadd\tr5, pc, #944\t@ (adr r5, 2e9dec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bfb8>)\n+\tadd\tr5, pc, #976\t@ (adr r5, 2e9e0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bfd8>)\n \tmovs\tr3, r2\n-\tmovs\tr3, #184\t@ 0xb8\n+\tmovs\tr3, #192\t@ 0xc0\n \tmovs\tr2, r2\n-\tmov\tip, r4\n+\tmov\tip, r5\n \tmovs\tr1, r2\n-\tadd\tr5, pc, #88\t@ (adr r5, 2e9aa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bc6c>)\n+\tadd\tr5, pc, #120\t@ (adr r5, 2e9ac0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bc8c>)\n \tmovs\tr3, r2\n-\tmovs\tr2, #252\t@ 0xfc\n+\tmovs\tr3, #4\n \tmovs\tr2, r2\n-\tcmp\tlr, fp\n+\tcmp\tlr, ip\n \tmovs\tr1, r2\n-\tadd\tr4, pc, #320\t@ (adr r4, 2e9b94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bd60>)\n+\tadd\tr4, pc, #352\t@ (adr r4, 2e9bb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bd80>)\n \tmovs\tr3, r2\n-\tmovs\tr2, #58\t@ 0x3a\n+\tmovs\tr2, #66\t@ 0x42\n \tmovs\tr2, r2\n-\tcmp\tr4, r0\n+\tcmp\tr4, r1\n \tmovs\tr1, r2\n-\tadd\tr3, pc, #472\t@ (adr r3, 2e9c38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14be04>)\n+\tadd\tr3, pc, #504\t@ (adr r3, 2e9c58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14be24>)\n \tmovs\tr3, r2\n-\tmovs\tr1, #122\t@ 0x7a\n+\tmovs\tr1, #130\t@ 0x82\n \tmovs\tr2, r2\n-\tmovs\tr1, #124\t@ 0x7c\n+\tmovs\tr1, #132\t@ 0x84\n \tmovs\tr2, r2\n-\tsubs\tr6, r4, #4\n+\tsubs\tr6, r5, #4\n \tmovs\tr2, r2\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n@@ -1502245,17 +1502245,17 @@\n \tmovs\tr0, r0\n \tadds\tr4, #4\n \tmovs\tr4, r3\n \tlsls\tr4, r0, #26\n \tmovs\tr0, r0\n \tadds\tr3, #240\t@ 0xf0\n \tmovs\tr4, r3\n-\tsubs\tr6, r5, #6\n+\tsubs\tr6, r6, #6\n \tmovs\tr2, r2\n-\tsubs\tr0, r0, #7\n+\tsubs\tr0, r1, #7\n \tmovs\tr2, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::dumpGCWiggle_Body(std::ostream&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/contig_output.C:2209\n@@ -1502807,41 +1502807,41 @@\n \teors\tr1, r3\n \tadds\tr3, #28\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr3, #10\n \tmovs\tr4, r3\n+\tsubs\tr0, r5, #6\n+\tmovs\tr2, r2\n \tsubs\tr0, r4, #6\n \tmovs\tr2, r2\n \tsubs\tr0, r3, #6\n \tmovs\tr2, r2\n-\tsubs\tr0, r2, #6\n-\tmovs\tr2, r2\n-\tsubs\tr0, r2, #6\n+\tsubs\tr0, r3, #6\n \tmovs\tr2, r2\n-\tsubs\tr0, r5, #6\n+\tsubs\tr0, r6, #6\n \tmovs\tr2, r2\n-\tsubs\tr0, r0, #7\n+\tsubs\tr0, r1, #7\n \tmovs\tr2, r2\n-\tsubs\tr4, r5, #7\n+\tsubs\tr4, r6, #7\n \tmovs\tr2, r2\n-\tsubs\tr2, r4, #7\n+\tsubs\tr2, r5, #7\n \tmovs\tr2, r2\n-\tsubs\tr6, r3, #7\n+\tsubs\tr6, r4, #7\n \tmovs\tr2, r2\n-\tsubs\tr1, #46\t@ 0x2e\n+\tsubs\tr1, #54\t@ 0x36\n \tmovs\tr2, r2\n-\tb.n\t2ea030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14c1fc>\n+\tb.n\t2ea040 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14c20c>\n \tmovs\tr0, r2\n \tadds\tr0, #18\n \tmovs\tr4, r3\n-\tsubs\tr2, r2, r6\n+\tsubs\tr2, r3, r6\n \tmovs\tr2, r2\n-\tsubs\tr4, r2, r6\n+\tsubs\tr4, r3, r6\n \tmovs\tr2, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const [clone .constprop.0]:\n ./src/mira/../../src/mira/stringcontainer.H:114\n@@ -1502990,17 +1502990,17 @@\n \tmovs\tr0, r0\n \tcmp\tr6, #92\t@ 0x5c\n \tmovs\tr4, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tcmp\tr6, #50\t@ 0x32\n \tmovs\tr4, r3\n-\tldmia\tr2, {r1, r2, r4, r7}\n+\tldmia\tr2!, {r1, r5, r7}\n \tmovs\tr7, r1\n-\tldmia\tr2, {r2, r4, r7}\n+\tldmia\tr2!, {r5, r7}\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1503731,41 +1503731,41 @@\n \tb.n\t2ea79e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14c96a>\n \tcmp\tr5, #36\t@ 0x24\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr5, #18\n \tmovs\tr4, r3\n-\tsubs\tr0, r1, r1\n+\tsubs\tr0, r2, r1\n \tmovs\tr2, r2\n-\tadds\tr0, r3, r1\n+\tadds\tr0, r4, r1\n \tmovs\tr2, r2\n-\tstr\tr7, [sp, #552]\t@ 0x228\n+\tstr\tr7, [sp, #584]\t@ 0x248\n \tmovs\tr3, r2\n-\tstr\tr7, [sp, #488]\t@ 0x1e8\n+\tstr\tr7, [sp, #520]\t@ 0x208\n \tmovs\tr3, r2\n-\tstmia\tr0!, {r1, r5, r7}\n+\tstmia\tr0!, {r1, r2, r3, r5, r7}\n \tmovs\tr7, r1\n \tcmp\tr2, #36\t@ 0x24\n \tmovs\tr4, r3\n-\tstr\tr6, [sp, #688]\t@ 0x2b0\n+\tstr\tr6, [sp, #720]\t@ 0x2d0\n \tmovs\tr3, r2\n-\tstr\tr6, [sp, #616]\t@ 0x268\n+\tstr\tr6, [sp, #648]\t@ 0x288\n \tmovs\tr3, r2\n-\tasrs\tr6, r5, #26\n+\tasrs\tr6, r6, #26\n \tmovs\tr2, r2\n-\tasrs\tr0, r5, #26\n+\tasrs\tr0, r6, #26\n \tmovs\tr2, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr0, r1, #25\n+\tasrs\tr0, r2, #25\n \tmovs\tr2, r2\n-\tasrs\tr2, r0, #25\n+\tasrs\tr2, r1, #25\n \tmovs\tr2, r2\n Contig::priv_dumpAsCAF(std::ostream&):\n ./src/mira/contig_output.C:1038\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n \tldr.w\tr2, [pc, #1584]\t@ 2eae24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14cff0>\n \tvpush\t{d8}\n@@ -1504587,44 +1504587,44 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #22\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #8\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr.w\tr0, [r2, #16]\n-\tasrs\tr4, r1, #16\n+\tldr.w\tr0, [sl, #16]\n+\tasrs\tr4, r2, #16\n \tmovs\tr2, r2\n-\tstr\tr2, [sp, #704]\t@ 0x2c0\n+\tstr\tr2, [sp, #736]\t@ 0x2e0\n \tmovs\tr3, r2\n-\tstr\tr2, [sp, #680]\t@ 0x2a8\n+\tstr\tr2, [sp, #712]\t@ 0x2c8\n \tmovs\tr3, r2\n-\tasrs\tr4, r7, #15\n+\tasrs\tr4, r0, #16\n \tmovs\tr2, r2\n-\tstr\tr2, [sp, #632]\t@ 0x278\n+\tstr\tr2, [sp, #664]\t@ 0x298\n \tmovs\tr3, r2\n-\tstr\tr1, [sp, #944]\t@ 0x3b0\n+\tstr\tr1, [sp, #976]\t@ 0x3d0\n \tmovs\tr3, r2\n-\tstr\tr1, [sp, #632]\t@ 0x278\n+\tstr\tr1, [sp, #664]\t@ 0x298\n \tmovs\tr3, r2\n-\tbls.n\t2eae58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d024>\n+\tbge.n\t2eae68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d034>\n \tmovs\tr0, r2\n-\tasrs\tr2, r5, #6\n+\tasrs\tr2, r6, #6\n \tmovs\tr2, r2\n-\tadds\tr1, #74\t@ 0x4a\n+\tadds\tr1, #82\t@ 0x52\n \tmovs\tr1, r2\n-\tbls.n\t2eadd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14cfa4>\n+\tbls.n\t2eade8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14cfb4>\n \tmovs\tr0, r2\n-\tcbnz\tr2, 2eae76 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d042>\n+\tcbnz\tr6, 2eae78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d044>\n \tmovs\tr7, r1\n-\tasrs\tr2, r3, #4\n+\tasrs\tr2, r4, #4\n \tmovs\tr2, r2\n-\tldrh\tr2, [r0, #54]\t@ 0x36\n+\tldrh\tr2, [r1, #54]\t@ 0x36\n \tmovs\tr3, r2\n-\t\t\t@ instruction: 0xb7f8\n+\t\t\t@ instruction: 0xb804\n \tmovs\tr7, r1\n \tmovs\tr1, #136\t@ 0x88\n \tmovs\tr4, r3\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const [clone .constprop.1]:\n ./src/mira/../../src/mira/stringcontainer.H:114\n \tldr\tr1, [pc, #260]\t@ (2eaf8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d158>)\n \tldr\tr2, [pc, #264]\t@ (2eaf90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d15c>)\n@@ -1504771,17 +1504771,17 @@\n \tmovs\tr0, r0\n \tmovs\tr0, #204\t@ 0xcc\n \tmovs\tr4, r3\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tmovs\tr0, #162\t@ 0xa2\n \tmovs\tr4, r3\n-\tpop\t{r1, r2, pc}\n+\tpop\t{r1, r4, pc}\n \tmovs\tr7, r1\n-\tpop\t{r2, pc}\n+\tpop\t{r4, pc}\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1504932,17 +1504932,17 @@\n \tmovs\tr0, r0\n \tsubs\tr4, r3, #6\n \tmovs\tr4, r3\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tsubs\tr2, r6, #5\n \tmovs\tr4, r3\n-\tcbnz\tr6, 2eb148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d314>\n+\tcbnz\tr2, 2eb14c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d318>\n \tmovs\tr7, r1\n-\tcbnz\tr4, 2eb14c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d318>\n+\tcbnz\tr0, 2eb150 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d31c>\n \tmovs\tr7, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1505966,62 +1505966,62 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tsubs\tr0, r5, #1\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr2, r3, #1\n \tmovs\tr4, r3\n-\tlsrs\tr6, r1, #18\n+\tlsrs\tr6, r2, #18\n \tmovs\tr2, r2\n-\tldrh\tr2, [r5, #22]\n+\tldrh\tr2, [r6, #22]\n \tmovs\tr3, r2\n-\tldrh\tr4, [r2, #22]\n+\tldrh\tr4, [r3, #22]\n \tmovs\tr3, r2\n \tlsrs\tr4, r0, #8\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrh\tr4, [r6, #16]\n+\tldrh\tr4, [r7, #16]\n \tmovs\tr3, r2\n-\tlsrs\tr2, r3, #14\n+\tlsrs\tr2, r4, #14\n \tmovs\tr2, r2\n-\tbcc.n\t2eb80c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d9d8>\n+\tbcc.n\t2eb81c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14d9e8>\n \tmovs\tr0, r2\n-\tcbz\tr6, 2eb8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dac8>\n+\tcbz\tr2, 2eb900 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dacc>\n \tmovs\tr7, r1\n-\tlsrs\tr4, r7, #12\n+\tlsrs\tr4, r0, #13\n \tmovs\tr2, r2\n-\tldrh\tr6, [r1, #12]\n+\tldrh\tr6, [r2, #12]\n \tmovs\tr3, r2\n-\tbcc.n\t2eb938 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14db04>\n+\tbcc.n\t2eb948 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14db14>\n \tmovs\tr0, r2\n-\tcbz\tr6, 2eb8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dac8>\n+\tcbz\tr2, 2eb900 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dacc>\n \tmovs\tr7, r1\n-\tlsrs\tr6, r6, #7\n+\tlsrs\tr6, r7, #7\n \tmovs\tr2, r2\n-\tlsrs\tr6, r6, #7\n+\tlsrs\tr6, r7, #7\n \tmovs\tr2, r2\n-\tlsrs\tr0, r6, #7\n+\tlsrs\tr0, r7, #7\n \tmovs\tr2, r2\n-\tbne.n\t2eb8e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14daac>\n+\tbne.n\t2eb8f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dabc>\n \tmovs\tr0, r2\n-\tlsrs\tr4, r0, #3\n+\tlsrs\tr4, r1, #3\n \tmovs\tr2, r2\n-\tvqadd.u8\td0, d10, d0\n-\tvqadd.u8\td0, d6, d0\n-\tlsrs\tr0, r1, #2\n+\tvqadd.u16\td0, d2, d0\n+\tvqadd.u8\td0, d14, d0\n+\tlsrs\tr0, r2, #2\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #10\n \tmovs\tr0, r0\n-\tmcr2\t0, 6, r0, cr12, cr0, {0}\n-\tmrc2\t0, 5, r0, cr12, cr0, {0}\n-\tmcr2\t0, 5, r0, cr0, cr0, {0}\n+\tmrc2\t0, 6, r0, cr4, cr0, {0}\n+\tmcr2\t0, 6, r0, cr4, cr0, {0}\n+\tmcr2\t0, 5, r0, cr8, cr0, {0}\n \tasrs\tr4, r4, #31\n \tmovs\tr4, r3\n-\tstrh\tr4, [r2, #34]\t@ 0x22\n+\tstrh\tr4, [r3, #34]\t@ 0x22\n \tmovs\tr3, r2\n Contig::debugDump():\n ./src/mira/contig_output.C:2534\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr\tr1, [pc, #652]\t@ (2ebb94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dd60>)\n \tsub\tsp, #260\t@ 0x104\n@@ -1506388,21 +1506388,21 @@\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr6, r1, #25\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr4, r4, #19\n+\tlsls\tr4, r5, #19\n \tmovs\tr2, r2\n-\tlsls\tr6, r7, #17\n+\tlsls\tr6, r0, #18\n \tmovs\tr2, r2\n \tasrs\tr4, r4, #19\n \tmovs\tr4, r3\n-\tbeq.n\t2ebb10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dcdc>\n+\tbeq.n\t2ebb20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14dcec>\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1508028,65 +1508028,65 @@\n \tldr\tr4, [pc, #56]\t@ (2ec7ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14e9b8>)\n \tldr\tr5, [sp, #28]\n \tldr\tr2, [r5, r4]\n \tldr.w\tr1, [r5, fp]\n \tblx\tb700 <__cxa_throw@plt>\n \tasrs\tr6, r7, #13\n \tmovs\tr4, r3\n-\tadd\tr5, sp, #936\t@ 0x3a8\n+\tadd\tr5, sp, #984\t@ 0x3d8\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrsh\tr4, [r6, r6]\n+\tldrsh\tr4, [r7, r6]\n \tmovs\tr3, r2\n-\tlsls\tr0, r4, #10\n+\tlsls\tr0, r5, #10\n \tmovs\tr2, r2\n-\tlsls\tr0, r4, #10\n+\tlsls\tr0, r5, #10\n \tmovs\tr2, r2\n \tasrs\tr0, r0, #13\n \tmovs\tr4, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #768\t@ (adr r4, 2ecae4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ecb0>)\n+\tadd\tr4, pc, #800\t@ (adr r4, 2ecb04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ecd0>)\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr6, r2, #26\n \tmovs\tr4, r3\n-\tldrh\tr2, [r7, r2]\n+\tldrh\tr2, [r0, r3]\n \tmovs\tr3, r2\n-\tbcc.n\t2ec8d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eaa4>\n+\tbcc.n\t2ec8f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eabc>\n \tmovs\tr7, r1\n-\tbcc.n\t2ec8d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ea9c>\n+\tbcc.n\t2ec8e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eab4>\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xe9a60011\n+\t\t\t@ instruction: 0xe9ae0011\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr4, [r7, r4]\n+\tldr\tr4, [r0, r5]\n \tmovs\tr3, r2\n-\tldr\tr7, [sp, #728]\t@ 0x2d8\n+\tldr\tr7, [sp, #760]\t@ 0x2f8\n \tmovs\tr0, r2\n-\tadd\tr4, pc, #656\t@ (adr r4, 2ecaa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ec70>)\n+\tadd\tr4, pc, #704\t@ (adr r4, 2ecad4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eca0>)\n \tmovs\tr7, r1\n-\tldrsb\tr4, [r6, r1]\n+\tldrsb\tr4, [r7, r1]\n \tmovs\tr3, r2\n-\tldmia\tr7!, {r2, r4, r5, r6}\n+\tldmia\tr7, {r7}\n \tmovs\tr7, r1\n-\tldmia\tr7!, {r4, r5, r6}\n+\tldmia\tr7!, {r2, r3, r4, r5, r6}\n \tmovs\tr7, r1\n-\tb.n\t2ec384 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14e550>\n+\tb.n\t2ec394 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14e560>\n \tmovs\tr1, r2\n-\tstr??.w\tr0, [r6, r1, lsl #1]\n-\t\t\t@ instruction: 0xf6da0011\n-\tmovt\tr0, #18449\t@ 0x4811\n-\tmovt\tr0, #26641\t@ 0x6811\n+\tstr??.w\tr0, [lr, r1, lsl #1]\n+\t\t\t@ instruction: 0xf6e20011\n+\tmovt\tr0, #51217\t@ 0xc811\n+\tmovt\tr0, #59409\t@ 0xe811\n ./src/mira/contig_output.C:1360\n \tadd\tr6, sp, #212\t@ 0xd4\n \tmov\tr0, r6\n \tbl\t2e9a6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bc38>\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #364]\t@ (2ec9ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eb78>)\n \tmovs\tr2, #38\t@ 0x26\n@@ -1508282,25 +1508282,25 @@\n /usr/include/c++/10/bits/basic_string.h:187\n \tmov\tr9, r0\n \tmov\tr5, r1\n \tb.n\t2ec8c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ea90>\n \tb.n\t2ec96e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eb3a>\n \tb.n\t2ec982 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eb4e>\n \tnop\n-\tmovw\tr0, #26641\t@ 0x6811\n-\t\t\t@ instruction: 0xf4c00011\n-\trsb\tr0, lr, #9502720\t@ 0x910000\n+\tmovw\tr0, #59409\t@ 0xe811\n+\t\t\t@ instruction: 0xf4c80011\n+\trsbs\tr0, r6, #9502720\t@ 0x910000\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs.w\tr0, sl, #9502720\t@ 0x910000\n-\tadc.w\tr0, r8, #9502720\t@ 0x910000\n+\trsb\tr0, r2, #9502720\t@ 0x910000\n+\tadcs.w\tr0, r0, #9502720\t@ 0x910000\n Contig::dumpContigReadList_Body(std::ostream&):\n ./src/mira/contig_output.C:1829\n \tldr\tr2, [pc, #576]\t@ (2ecc10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eddc>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_list.h:955\n \tmov\tr9, r0\n ./src/mira/contig_output.C:1829\n@@ -1508602,39 +1508602,39 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t2ecbf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14edc0>\n \tnop\n \tlsls\tr0, r1, #22\n \tmovs\tr4, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr4, r4, #15\n+\tasrs\tr4, r5, #15\n \tmovs\tr1, r2\n-\tcbnz\tr2, 2ecc9e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14ee6a>\n+\tpop\t{r1}\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #21\n \tmovs\tr4, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsls\tr6, r0, #19\n \tmovs\tr4, r3\n-\tldmia\tr2, {r1, r2, r4, r5}\n+\tldmia\tr2!, {r1, r6}\n \tmovs\tr7, r1\n-\tldmia\tr2!, {r1, r4, r5}\n+\tldmia\tr2, {r1, r2, r3, r4, r5}\n \tmovs\tr7, r1\n-\tb.n\t2ecd1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eee8>\n+\tb.n\t2ecd2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14eef8>\n \tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #552\t@ (adr r0, 2ece70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f03c>)\n+\tadd\tr0, pc, #600\t@ (adr r0, 2ecea0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f06c>)\n \tmovs\tr7, r1\n-\tadd\tr0, pc, #544\t@ (adr r0, 2ece6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f038>)\n+\tadd\tr0, pc, #592\t@ (adr r0, 2ece9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f068>)\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n Contig::priv_dumpAsMAF(std::ostream&):\n ./src/mira/contig_output.C:1148\n \tldr.w\tr2, [pc, #1888]\t@ 2ed3b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f580>\n \tldr.w\tr3, [pc, #1888]\t@ 2ed3b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f584>\n@@ -1509567,31 +1509567,31 @@\n \tmovs\tr0, r0\n \tlsls\tr6, r3, #11\n \tmovs\tr4, r3\n \tlsrs\tr0, r0, #22\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #23\n \tmovs\tr0, r0\n-\taddw\tr0, ip, #17\n-\t\t\t@ instruction: 0xf1f00011\n-\t\t\t@ instruction: 0xf1e00011\n-\tsubs.w\tr0, r8, #17\n-\torrs.w\tr0, r0, #17\n-\tbics.w\tr0, r2, #17\n-\tmcr\t0, 7, r0, cr2, cr1, {0}\n+\t\t\t@ instruction: 0xf2140011\n+\t\t\t@ instruction: 0xf1f80011\n+\t\t\t@ instruction: 0xf1e80011\n+\trsb\tr0, r0, #17\n+\torrs.w\tr0, r8, #17\n+\tbics.w\tr0, sl, #17\n+\tmcr\t0, 7, r0, cr10, cr1, {0}\n \tlsrs\tr4, r0, #8\n \tmovs\tr0, r0\n-\tmrc\t0, 6, r0, cr10, cr1, {0}\n+\tmcr\t0, 7, r0, cr2, cr1, {0}\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbge.n\t2ed464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f630>\n+\tbge.n\t2ed474 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14f640>\n \tmovs\tr0, r2\n-\tstc\t0, cr0, [r0, #-68]!\t@ 0xffffffbc\n+\tstc\t0, cr0, [r8, #-68]!\t@ 0xffffffbc\n \tldc2\t0, cr0, [lr, #-108]!\t@ 0xffffff94\n-\tstr\tr1, [sp, #480]\t@ 0x1e0\n+\tstr\tr1, [sp, #512]\t@ 0x200\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1510105,36 +1510105,36 @@\n \tnop\n \tsmlsdx\tr0, r4, fp, r0\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsmlawt\tr0, r8, fp, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr0, r4, #6\n+\tlsrs\tr0, r5, #6\n \tmovs\tr1, r2\n-\t\t\t@ instruction: 0xead40011\n+\t\t\t@ instruction: 0xeadc0011\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldr??.w\tr0, [r8, fp, lsl #1]\n-\tstmdb\tr0, {r0, r4}\n-\t\t\t@ instruction: 0xe8ca0011\n-\tldmia.w\tip!, {r0, r4}\n-\tldrh\tr6, [r4, #44]\t@ 0x2c\n+\tstmdb\tr8, {r0, r4}\n+\t\t\t@ instruction: 0xe8d20011\n+\t\t\t@ instruction: 0xe8c40011\n+\tldrh\tr6, [r5, #44]\t@ 0x2c\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #920]\t@ 0x398\n+\tstr\tr4, [sp, #968]\t@ 0x3c8\n \tmovs\tr7, r1\n-\tstr\tr4, [sp, #912]\t@ 0x390\n+\tstr\tr4, [sp, #960]\t@ 0x3c0\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n Contig::priv_dumpAsTextOrHTML(std::ostream&, unsigned char, std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, int, int):\n ./src/mira/contig_output.C:307\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n@@ -1511699,59 +1511699,59 @@\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n \tb.n\t2ede2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14fff8>\n \t...\n \t\t\t@ instruction: 0xf72e001b\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf720001b\n-\tb.n\t2ee16c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150338>\n+\tb.n\t2ee17c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150348>\n \tmovs\tr1, r2\n \tlsrs\tr4, r0, #8\n \tmovs\tr0, r0\n-\tadd\tr4, sp, #696\t@ 0x2b8\n+\tadd\tr4, sp, #728\t@ 0x2d8\n \tmovs\tr0, r2\n-\tb.n\t2ede3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150008>\n+\tb.n\t2ede4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150018>\n \tmovs\tr1, r2\n-\tb.n\t2eea30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150bfc>\n+\tb.n\t2eea40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150c0c>\n \tmovs\tr1, r2\n-\tb.n\t2ee7cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150998>\n+\tb.n\t2ee7dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1509a8>\n \tmovs\tr1, r2\n-\tb.n\t2ee894 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150a60>\n+\tb.n\t2ee8a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150a70>\n \tmovs\tr1, r2\n-\tb.n\t2ee5b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150780>\n+\tb.n\t2ee5c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150790>\n \tmovs\tr1, r2\n-\tldc2\t0, cr0, [r2, #64]\t@ 0x40\n-\tsvc\t166\t@ 0xa6\n+\tldc2\t0, cr0, [sl, #64]\t@ 0x40\n+\tsvc\t174\t@ 0xae\n \tmovs\tr1, r2\n-\tstrh\tr0, [r2, #36]\t@ 0x24\n+\tstrh\tr4, [r3, #36]\t@ 0x24\n \tmovs\tr7, r1\n \tmcr\t0, 0, r0, cr2, cr11, {0}\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr6, [r3, #10]\n+\tstrh\tr6, [r4, #10]\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tblt.n\t2ee400 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1505cc>\n+\tblt.n\t2ee410 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1505dc>\n \tmovs\tr1, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbgt.n\t2ee4a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150670>\n+\tbgt.n\t2ee4b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150680>\n \tmovs\tr1, r2\n ./src/mira/../../src/mira/pcrcontainer.H:172\n \tldr\tr3, [r5, #68]\t@ 0x44\n \tmov.w\tlr, #12\n \tldr\tr2, [sp, #56]\t@ 0x38\n \tmla\tip, lr, r2, r3\n ./src/mira/../../src/mira/pcrcontainer.H:215\n@@ -1512688,49 +1512688,49 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr2, [r0, #21]\n+\tldrb\tr2, [r1, #21]\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrb\tr4, [r1, #19]\n+\tldrb\tr4, [r2, #19]\n \tmovs\tr0, r2\n-\tadd\tr4, sp, #280\t@ 0x118\n+\tadd\tr4, sp, #328\t@ 0x148\n \tmovs\tr7, r1\n-\tadd\tr4, sp, #264\t@ 0x108\n+\tadd\tr4, sp, #312\t@ 0x138\n \tmovs\tr7, r1\n-\tstmia\tr2!, {r1, r7}\n+\tstmia\tr2!, {r1, r3, r7}\n \tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tbvs.n\t2eeb28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150cf4>\n+\tbvs.n\t2eeb38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150d04>\n \tmovs\tr1, r2\n-\tstrb\tr4, [r0, #27]\n+\tstrb\tr4, [r1, #27]\n \tmovs\tr1, r2\n-\tbvs.n\t2eebc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150d94>\n+\tbvs.n\t2eebd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150da4>\n \tmovs\tr1, r2\n-\tbvs.n\t2eec08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150dd4>\n+\tbvs.n\t2eec18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150de4>\n \tmovs\tr1, r2\n-\tbvc.n\t2eec38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150e04>\n+\tbvc.n\t2eec48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150e14>\n \tmovs\tr1, r2\n-\tbvs.n\t2eec30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150dfc>\n+\tbvs.n\t2eec40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150e0c>\n \tmovs\tr1, r2\n-\tbpl.n\t2eec40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150e0c>\n+\tbpl.n\t2eec50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150e1c>\n \tmovs\tr1, r2\n-\tbpl.n\t2eeb54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150d20>\n+\tbpl.n\t2eeb64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150d30>\n \tmovs\tr1, r2\n-\tbvs.n\t2eeb50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150d1c>\n+\tbvs.n\t2eeb60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x150d2c>\n \tmovs\tr1, r2\n ./src/mira/../../src/mira/readpool.H:123\n \tadd\tr4, sp, #272\t@ 0x110\n \tmov\tr0, r4\n \tbl\t2e9a6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bc38>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #1848]\t@ 2ef310 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1514dc>\n@@ -1513665,31 +1513665,31 @@\n ./src/mira/contig_output.C:586\n \tldr\tr1, [pc, #156]\t@ (2ef398 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151564>)\n \tmov\tr0, sl\n \tadd\tr1, pc\n \tbl\t2e85d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14a79c>\n \tb.w\t2ee102 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1502ce>\n \t...\n-\tadd\tr1, sp, #128\t@ 0x80\n+\tadd\tr1, sp, #176\t@ 0xb0\n \tmovs\tr7, r1\n-\tadd\tr1, sp, #104\t@ 0x68\n+\tadd\tr1, sp, #152\t@ 0x98\n \tmovs\tr7, r1\n-\tit\tpl\n-\tmovpl\tr1, r2\n+\tnop\t{6}\n+\tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tbpl.n\t2ef348 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151514>\n+\tbpl.n\t2ef358 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151524>\n \tmovs\tr1, r2\n-\tbpl.n\t2ef35c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151528>\n+\tbpl.n\t2ef36c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151538>\n \tmovs\tr1, r2\n-\tbcc.n\t2ef3f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1515c0>\n+\tbcc.n\t2ef404 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1515d0>\n \tmovs\tr1, r2\n \tlsrs\tr4, r4, #17\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #27\n \tmovs\tr0, r0\n@@ -1513715,33 +1513715,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #976\t@ (adr r3, 2ef748 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151914>)\n+\tadd\tr4, pc, #0\t@ (adr r4, 2ef378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151544>)\n \tmovs\tr7, r1\n-\tadd\tr3, pc, #960\t@ (adr r3, 2ef73c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151908>)\n+\tadd\tr3, pc, #1008\t@ (adr r3, 2ef76c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151938>)\n \tmovs\tr7, r1\n-\trev\tr0, r6\n+\trev\tr0, r7\n \tmovs\tr1, r2\n-\tldmia\tr6, {r1, r4, r5, r6}\n+\tldmia\tr6, {r1, r3, r4, r5, r6}\n \tmovs\tr1, r2\n-\tldmia\tr6!, {r2, r3, r4, r7}\n+\tldmia\tr6!, {r2, r5, r7}\n \tmovs\tr1, r2\n-\tstrh\tr2, [r2, #46]\t@ 0x2e\n+\tstrh\tr2, [r3, #46]\t@ 0x2e\n \tmovs\tr1, r2\n-\tldmia\tr6, {r1, r3, r4, r5, r6}\n+\tldmia\tr6!, {r1, r7}\n \tmovs\tr1, r2\n-\tstrb\tr4, [r3, #6]\n+\tstrb\tr4, [r4, #6]\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r1, r3, r4, r7}\n+\tldmia\tr5, {r1, r5, r7}\n \tmovs\tr1, r2\n ./src/mira/contig_output.C:468\n \tldr\tr3, [sp, #36]\t@ 0x24\n \tldr\tr2, [sp, #76]\t@ 0x4c\n ./src/mira/../../src/util/dptools.H:93\n \tldr.w\tlr, [pc, #960]\t@ 2ef764 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151930>\n ./src/mira/contig_output.C:468\n@@ -1514278,55 +1514278,55 @@\n \tb.n\t2ef664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151830>\n \tb.n\t2ef66a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151836>\n \tb.n\t2ef65c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151828>\n \tb.n\t2ef664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151830>\n \tnop\n \tlsrs\tr4, r2, #1\n \tmovs\tr0, r0\n-\tldmia\tr4!, {r6}\n+\tldmia\tr4!, {r3, r6}\n \tmovs\tr1, r2\n-\tstr\tr3, [sp, #256]\t@ 0x100\n+\tstr\tr3, [sp, #288]\t@ 0x120\n \tmovs\tr0, r2\n-\tldmia\tr3, {r3, r6, r7}\n+\tldmia\tr3!, {r4, r6, r7}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r1, r5, r7}\n+\tldmia\tr3, {r1, r3, r5, r7}\n \tmovs\tr1, r2\n-\tldmia\tr3, {r2, r3, r4, r5, r6}\n+\tldmia\tr3!, {r2, r7}\n \tmovs\tr1, r2\n-\tstr\tr2, [sp, #888]\t@ 0x378\n+\tstr\tr2, [sp, #920]\t@ 0x398\n \tmovs\tr0, r2\n-\tldmia\tr3, {r3, r5, r6}\n+\tldmia\tr3!, {r4, r5, r6}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r1, r6}\n+\tldmia\tr3, {r1, r3, r6}\n \tmovs\tr1, r2\n-\tstr\tr2, [sp, #496]\t@ 0x1f0\n+\tstr\tr2, [sp, #528]\t@ 0x210\n \tmovs\tr0, r2\n-\tldmia\tr3!, {r1}\n+\tldmia\tr3, {r1, r3}\n \tmovs\tr1, r2\n-\tstrh\tr0, [r2, #10]\n+\tstrh\tr0, [r3, #10]\n \tmovs\tr1, r2\n-\tldmia\tr2, {r1, r2, r3, r4, r5, r7}\n+\tldmia\tr2, {r1, r2, r6, r7}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r4, r5, r7}\n+\tldmia\tr3, {r3, r4, r5, r7}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r4, r7}\n+\tldmia\tr3, {r3, r4, r7}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r4, r5, r6}\n+\tldmia\tr3, {r3, r4, r5, r6}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r4, r6}\n+\tldmia\tr3, {r3, r4, r6}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r4, r5}\n+\tldmia\tr3, {r3, r4, r5}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r4}\n+\tldmia\tr3, {r3, r4}\n \tmovs\tr1, r2\n-\tldmia\tr2!, {r4, r5, r6, r7}\n+\tldmia\tr2!, {r3, r4, r5, r6, r7}\n \tmovs\tr1, r2\n-\tldmia\tr2!, {r4, r6, r7}\n+\tldmia\tr2!, {r3, r4, r6, r7}\n \tmovs\tr1, r2\n-\tldmia\tr3!, {r2, r5, r6}\n+\tldmia\tr3, {r2, r3, r5, r6}\n \tmovs\tr1, r2\n Contig::dumpAsHTML(std::ostream&, int, int):\n ./src/mira/contig_output.C:297\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r2\n \tldr\tr2, [pc, #204]\t@ (2ef890 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x151a5c>)\n \tmov\tr5, r3\n@@ -1516116,51 +1516116,51 @@\n \t...\n \tbvs.n\t2f04a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15266c>\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbvs.n\t2f0478 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x152644>\n \tmovs\tr3, r3\n-\tstmia\tr6!, {r1, r2, r6}\n+\tstmia\tr6!, {r1, r2, r3, r6}\n \tmovs\tr1, r2\n \tlsrs\tr4, r0, #8\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r1, r5, r6, r7}\n+\tstmia\tr1!, {r1, r3, r5, r6, r7}\n \tmovs\tr1, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbgt.n\t2f0538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x152704>\n+\tbgt.n\t2f0548 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x152714>\n \tmovs\tr0, r2\n-\tittt\teq\n+\titet\teq\n \tmoveq\tr1, r2\n-\tstreq\tr4, [r0, #56]\t@ 0x38\n+\tstrne\tr0, [r2, #56]\t@ 0x38\n \tmoveq\tr7, r1\n \tldmia\tr4, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr3, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr6, [r1, #8]\n+\tstr\tr6, [r2, #8]\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrsh\tr6, [r5, r5]\n+\tldrsh\tr6, [r6, r5]\n \tmovs\tr0, r2\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #320\t@ 0x140\n \tldr\tr5, [pc, #624]\t@ (2f0808 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1529d4>)\n \tmov\tr0, sl\n \tadd\tr4, sp, #256\t@ 0x100\n \tblx\tbcc4 \n@@ -1516521,29 +1516521,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r1, #54]\t@ 0x36\n+\tldrh\tr6, [r2, #54]\t@ 0x36\n \tmovs\tr7, r1\n-\tldrh\tr6, [r0, #54]\t@ 0x36\n+\tldrh\tr2, [r2, #54]\t@ 0x36\n \tmovs\tr7, r1\n-\tadd\tr5, pc, #24\t@ (adr r5, 2f0840 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x152a0c>)\n+\tadd\tr5, pc, #56\t@ (adr r5, 2f0860 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x152a2c>)\n \tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstr\tr0, [r6, #68]\t@ 0x44\n+\tstr\tr4, [r7, #68]\t@ 0x44\n \tmovs\tr7, r1\n-\tstr\tr4, [r5, #68]\t@ 0x44\n+\tstr\tr0, [r7, #68]\t@ 0x44\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #320\t@ 0x140\n \tadd\tr4, sp, #256\t@ 0x100\n \tmov\tr0, sl\n@@ -1516943,19 +1516943,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r3, #32]\n+\tldrh\tr0, [r5, #32]\n \tmovs\tr7, r1\n-\tldrh\tr0, [r3, #32]\n+\tldrh\tr4, [r4, #32]\n \tmovs\tr7, r1\n-\tadd\tr2, pc, #352\t@ (adr r2, 2f0ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x152e6c>)\n+\tadd\tr2, pc, #384\t@ (adr r2, 2f0cc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x152e8c>)\n \tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1517474,17 +1517474,17 @@\n \tmovs\tr0, r0\n \tstmia\tr2!, {r1, r3, r4, r6}\n \tmovs\tr3, r3\n \tstmia\tr2!, {r1, r2, r6}\n \tmovs\tr3, r3\n \tstmia\tr1!, {r3, r4, r5, r6}\n \tmovs\tr3, r3\n-\tcbz\tr6, 2f0f46 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x153112>\n+\tcbz\tr6, 2f0f48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x153114>\n \tmovs\tr1, r2\n-\tcbz\tr4, 2f0f48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x153114>\n+\tcbz\tr4, 2f0f4a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x153116>\n \tmovs\tr1, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Contig::saveAsGAP4DA(std::__cxx11::basic_string, std::allocator > const&, std::ostream&):\n ./src/mira/contig_output.C:1727\n@@ -1518704,25 +1518704,25 @@\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n \tb.n\t2f1732 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1538fe>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr0!, {r1, r2, r3, r6}\n \tmovs\tr3, r3\n-\tcbz\tr6, 2f182a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1539f6>\n+\tcbz\tr6, 2f182c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1539f8>\n \tmovs\tr1, r2\n \tstmia\tr0!, {r1, r3, r4, r5}\n \tmovs\tr3, r3\n \tlsrs\tr4, r0, #8\n \tmovs\tr0, r0\n-\tuxtb\tr4, r5\n+\tuxtb\tr4, r6\n \tmovs\tr1, r2\n-\tsxtb\tr6, r7\n+\tuxth\tr6, r0\n \tmovs\tr1, r2\n-\tldr\tr2, [sp, #600]\t@ 0x258\n+\tldr\tr2, [sp, #648]\t@ 0x288\n \tmovs\tr7, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n@@ -1518730,49 +1518730,49 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tpop\t{r3, r5, r7}\n \tmovs\tr3, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrh\tr4, [r6, #40]\t@ 0x28\n+\tldrh\tr4, [r7, #40]\t@ 0x28\n \tmovs\tr1, r2\n-\tadd\tr7, sp, #184\t@ 0xb8\n+\tadd\tr7, sp, #216\t@ 0xd8\n \tmovs\tr1, r2\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #936\t@ 0x3a8\n+\tadd\tr5, sp, #968\t@ 0x3c8\n \tmovs\tr1, r2\n-\tadd\tr5, sp, #888\t@ 0x378\n+\tadd\tr5, sp, #920\t@ 0x398\n \tmovs\tr1, r2\n-\tldrb\tr0, [r3, #7]\n+\tldrb\tr0, [r4, #7]\n \tmovs\tr1, r2\n-\tadd\tr5, sp, #136\t@ 0x88\n+\tadd\tr5, sp, #168\t@ 0xa8\n \tmovs\tr1, r2\n-\tldrb\tr0, [r4, #4]\n+\tldrb\tr0, [r5, #4]\n \tmovs\tr1, r2\n-\tadd\tr4, sp, #744\t@ 0x2e8\n+\tadd\tr4, sp, #776\t@ 0x308\n \tmovs\tr1, r2\n-\tadd\tr4, sp, #816\t@ 0x330\n+\tadd\tr4, sp, #848\t@ 0x350\n \tmovs\tr1, r2\n-\tmovs\tr2, #14\n+\tmovs\tr2, #22\n \tmovs\tr0, r2\n-\tadd\tr4, sp, #88\t@ 0x58\n+\tadd\tr4, sp, #120\t@ 0x78\n \tmovs\tr1, r2\n \tbx\tr3\n \tmovs\tr7, r1\n-\tstrb\tr0, [r2, #16]\n+\tstrb\tr4, [r3, #16]\n \tmovs\tr7, r1\n \tbxns\tr0\n \tmovs\tr7, r1\n-\tstrb\tr0, [r0, #16]\n+\tstrb\tr4, [r1, #16]\n \tmovs\tr7, r1\n Contig::dumpWiggle_Body(std::ostream&, std::__cxx11::basic_string, std::allocator >&, bool):\n ./src/mira/contig_output.C:2106\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr4, [pc, #2444]\t@ 2f21cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154398>\n \tvpush\t{d8}\n@@ -1520072,59 +1520072,59 @@\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xb70c\n \tmovs\tr3, r3\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #816\t@ (adr r2, 2f2514 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1546e0>)\n+\tadd\tr2, pc, #848\t@ (adr r2, 2f2534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154700>)\n \tmovs\tr1, r2\n-\tadd\tr1, sp, #696\t@ 0x2b8\n+\tadd\tr1, sp, #728\t@ 0x2d8\n \tmovs\tr1, r2\n-\tmovs\tr2, #192\t@ 0xc0\n+\tmovs\tr2, #200\t@ 0xc8\n \tmovs\tr3, r2\n-\tadd\tr1, sp, #544\t@ 0x220\n+\tadd\tr1, sp, #576\t@ 0x240\n \tmovs\tr1, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr4, [r3, #92]\t@ 0x5c\n+\tldr\tr4, [r4, #92]\t@ 0x5c\n \tmovs\tr2, r2\n-\tadd\tr0, sp, #936\t@ 0x3a8\n+\tadd\tr0, sp, #968\t@ 0x3c8\n \tmovs\tr1, r2\n-\tadd\tr0, sp, #832\t@ 0x340\n+\tadd\tr0, sp, #864\t@ 0x360\n \tmovs\tr1, r2\n-\tadd\tr1, pc, #384\t@ (adr r1, 2f2384 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154550>)\n+\tadd\tr1, pc, #416\t@ (adr r1, 2f23a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154570>)\n \tmovs\tr1, r2\n-\tldmia\tr1!, {r2, r3, r4, r5}\n+\tldmia\tr1!, {r2, r6}\n \tmovs\tr4, r2\n-\tadd\tr0, sp, #240\t@ 0xf0\n+\tadd\tr0, sp, #272\t@ 0x110\n \tmovs\tr1, r2\n-\tadd\tr0, sp, #264\t@ 0x108\n+\tadd\tr0, sp, #296\t@ 0x128\n \tmovs\tr1, r2\n-\tadd\tr1, pc, #624\t@ (adr r1, 2f2484 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154650>)\n+\tadd\tr1, pc, #656\t@ (adr r1, 2f24a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154670>)\n \tmovs\tr1, r2\n-\tadd\tr1, pc, #576\t@ (adr r1, 2f2458 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154624>)\n+\tadd\tr1, pc, #608\t@ (adr r1, 2f2478 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154644>)\n \tmovs\tr1, r2\n-\tadd\tr1, pc, #552\t@ (adr r1, 2f2444 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154610>)\n+\tadd\tr1, pc, #584\t@ (adr r1, 2f2464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154630>)\n \tmovs\tr1, r2\n-\tcbnz\tr4, 2f228e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15445a>\n+\tcbnz\tr4, 2f2290 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15445c>\n \tmovs\tr1, r2\n-\tldr\tr2, [r3, #96]\t@ 0x60\n+\tldr\tr2, [r4, #96]\t@ 0x60\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #30\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tadd\tr7, sp, #264\t@ 0x108\n \tmovs\tr3, r3\n-\tldr\tr2, [sp, #784]\t@ 0x310\n+\tldr\tr2, [sp, #816]\t@ 0x330\n \tmovs\tr1, r2\n-\tadd\tr1, pc, #808\t@ (adr r1, 2f2564 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154730>)\n+\tadd\tr1, pc, #840\t@ (adr r1, 2f2584 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154750>)\n \tmovs\tr1, r2\n Contig::priv_dumpAsDebug(std::ostream&):\n ./src/mira/contig_output.C:715\n \tldr\tr2, [pc, #944]\t@ (2f25f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1547bc>)\n \tldr\tr3, [pc, #948]\t@ (2f25f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1547c0>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1520643,19 +1520643,19 @@\n \tb.n\t2f24ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1546b8>\n ./src/mira/contig_output.C:740\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tadd\tr5, sp, #128\t@ 0x80\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcbnz\tr4, 2f2662 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15482e>\n+\tcbnz\tr4, 2f2664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154830>\n \tmovs\tr0, r2\n-\tadd\tr1, pc, #176\t@ (adr r1, 2f26b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15487c>)\n+\tadd\tr1, pc, #208\t@ (adr r1, 2f26d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15489c>)\n \tmovs\tr1, r2\n-\tadd\tr1, pc, #168\t@ (adr r1, 2f26ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154878>)\n+\tadd\tr1, pc, #200\t@ (adr r1, 2f26cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x154898>)\n \tmovs\tr1, r2\n \tadd\tr2, sp, #192\t@ 0xc0\n \tmovs\tr3, r3\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter) [clone .constprop.0]:\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n@@ -1521730,27 +1521730,27 @@\n \tmovs\tr3, r3\n \tadd\tr1, sp, #264\t@ 0x108\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\torrs\tr4, r3\n+\torrs\tr0, r5\n \tmovs\tr7, r1\n-\torrs\tr6, r2\n+\torrs\tr2, r4\n \tmovs\tr7, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\ttst\tr2, r1\n+\ttst\tr6, r2\n \tmovs\tr7, r1\n-\ttst\tr4, r0\n+\ttst\tr0, r2\n \tmovs\tr7, r1\n \tadd\tr1, pc, #712\t@ (adr r1, 2f31c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155394>)\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Contig::dumpReadTagList_Body(std::ostream&):\n ./src/mira/contig_output.C:1915\n@@ -1523389,115 +1523389,115 @@\n \tldr.w\tr1, [fp, lr]\n \tblx\tb700 <__cxa_throw@plt>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr0, pc, #240\t@ (adr r0, 2f3d14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155ee0>)\n \tmovs\tr3, r3\n-\tadd\tr6, sp, #624\t@ 0x270\n+\tadd\tr6, sp, #656\t@ 0x290\n \tmovs\tr0, r2\n-\tadd\tr6, sp, #568\t@ 0x238\n+\tadd\tr6, sp, #600\t@ 0x258\n \tmovs\tr0, r2\n \tadd\tr0, pc, #48\t@ (adr r0, 2f3c60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155e2c>)\n \tmovs\tr3, r3\n-\tadd\tr6, sp, #480\t@ 0x1e0\n+\tadd\tr6, sp, #512\t@ 0x200\n \tmovs\tr0, r2\n-\tadd\tr6, sp, #464\t@ 0x1d0\n+\tadd\tr6, sp, #496\t@ 0x1f0\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #26\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #960\t@ 0x3c0\n+\tadd\tr3, sp, #992\t@ 0x3e0\n \tmovs\tr0, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #680\t@ 0x2a8\n+\tadd\tr3, sp, #712\t@ 0x2c8\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #216\t@ 0xd8\n+\tadd\tr3, sp, #248\t@ 0xf8\n \tmovs\tr0, r2\n-\tadd\tr3, sp, #120\t@ 0x78\n+\tadd\tr3, sp, #152\t@ 0x98\n \tmovs\tr0, r2\n-\tadd\tr3, sp, #24\n+\tadd\tr3, sp, #56\t@ 0x38\n \tmovs\tr0, r2\n-\tadd\tr2, sp, #744\t@ 0x2e8\n+\tadd\tr2, sp, #776\t@ 0x308\n \tmovs\tr0, r2\n-\tadd\tr2, sp, #448\t@ 0x1c0\n+\tadd\tr2, sp, #480\t@ 0x1e0\n \tmovs\tr0, r2\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tstrh\tr4, [r1, r1]\n+\tstrh\tr4, [r2, r1]\n \tmovs\tr0, r2\n \tldr\tr2, [sp, #824]\t@ 0x338\n \tmovs\tr3, r3\n-\tcmp\tr7, #124\t@ 0x7c\n+\tcmp\tr7, #132\t@ 0x84\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr7, #8\n+\tcmp\tr7, #16\n \tmovs\tr0, r2\n-\tldrsh\tr6, [r1, r5]\n+\tldrsh\tr2, [r3, r5]\n \tmovs\tr7, r1\n-\tldrsh\tr0, [r1, r5]\n+\tldrsh\tr4, [r2, r5]\n \tmovs\tr7, r1\n-\tstrb\tr6, [r0, #22]\n+\tstrb\tr6, [r1, #22]\n \tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr5, #240\t@ 0xf0\n+\tcmp\tr5, #248\t@ 0xf8\n \tmovs\tr0, r2\n-\tcmp\tr5, #122\t@ 0x7a\n+\tcmp\tr5, #130\t@ 0x82\n \tmovs\tr0, r2\n-\tadds\tr4, #188\t@ 0xbc\n+\tadds\tr4, #200\t@ 0xc8\n \tmovs\tr7, r1\n-\tadds\tr4, #184\t@ 0xb8\n+\tadds\tr4, #196\t@ 0xc4\n \tmovs\tr7, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n-\tldrb\tr2, [r2, r4]\n+\tldrb\tr6, [r3, r4]\n \tmovs\tr7, r1\n-\tldrb\tr4, [r1, r4]\n+\tldrb\tr0, [r3, r4]\n \tmovs\tr7, r1\n-\tstrb\tr2, [r1, #13]\n+\tstrb\tr2, [r2, #13]\n \tmovs\tr1, r2\n-\tcmp\tr3, #178\t@ 0xb2\n+\tcmp\tr3, #186\t@ 0xba\n \tmovs\tr0, r2\n-\tadds\tr2, #250\t@ 0xfa\n+\tadds\tr3, #6\n \tmovs\tr7, r1\n-\tadds\tr2, #248\t@ 0xf8\n+\tadds\tr3, #4\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tldrh\tr6, [r2, r5]\n+\tldrh\tr2, [r4, r5]\n \tmovs\tr7, r1\n-\tldrh\tr2, [r2, r5]\n+\tldrh\tr6, [r3, r5]\n \tmovs\tr7, r1\n-\tstrb\tr2, [r2, #6]\n+\tstrb\tr2, [r3, #6]\n \tmovs\tr1, r2\n-\tcmp\tr1, #240\t@ 0xf0\n+\tcmp\tr1, #248\t@ 0xf8\n \tmovs\tr0, r2\n-\tldrh\tr0, [r1, r1]\n+\tldrh\tr4, [r2, r1]\n \tmovs\tr7, r1\n-\tldrh\tr4, [r0, r1]\n+\tldrh\tr0, [r2, r1]\n \tmovs\tr7, r1\n-\tstrb\tr4, [r0, #2]\n+\tstrb\tr4, [r1, #2]\n \tmovs\tr1, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr2, [r5, r5]\n+\tldr\tr6, [r6, r5]\n \tmovs\tr7, r1\n-\tldr\tr6, [r4, r5]\n+\tldr\tr2, [r6, r5]\n \tmovs\tr7, r1\n-\tldr\tr6, [r4, #120]\t@ 0x78\n+\tldr\tr6, [r5, #120]\t@ 0x78\n \tmovs\tr1, r2\n ./src/mira/../../src/mira/stringcontainer.H:116\n \tadd\tr7, sp, #100\t@ 0x64\n \tmov\tr0, r7\n \tbl\t2e9a6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x14bc38>\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #372]\t@ (2f3e70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15603c>)\n@@ -1523694,17 +1523694,17 @@\n \tb.n\t2f3df2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155fbe>\n \tb.n\t2f3e02 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155fce>\n \tb.n\t2f3df2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155fbe>\n \tb.n\t2f3e02 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155fce>\n \tb.n\t2f3dce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155f9a>\n \tb.n\t2f3e14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155fe0>\n \tb.n\t2f3e26 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x155ff2>\n-\tcmp\tr6, #238\t@ 0xee\n+\tcmp\tr6, #250\t@ 0xfa\n \tmovs\tr7, r1\n-\tcmp\tr6, #236\t@ 0xec\n+\tcmp\tr6, #248\t@ 0xf8\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1524296,53 +1524296,53 @@\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [sp, #744]\t@ 0x2e8\n \tmovs\tr3, r3\n \tlsrs\tr0, r7, #20\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #784]\t@ 0x310\n+\tldr\tr6, [sp, #816]\t@ 0x330\n \tmovs\tr0, r2\n-\tldr\tr6, [sp, #776]\t@ 0x308\n+\tldr\tr6, [sp, #808]\t@ 0x328\n \tmovs\tr0, r2\n-\tldr\tr6, [sp, #608]\t@ 0x260\n+\tldr\tr6, [sp, #640]\t@ 0x280\n \tmovs\tr0, r2\n-\tldr\tr6, [sp, #520]\t@ 0x208\n+\tldr\tr6, [sp, #552]\t@ 0x228\n \tmovs\tr0, r2\n-\tldr\tr6, [sp, #408]\t@ 0x198\n+\tldr\tr6, [sp, #440]\t@ 0x1b8\n \tmovs\tr0, r2\n-\tldr\tr6, [sp, #296]\t@ 0x128\n+\tldr\tr6, [sp, #328]\t@ 0x148\n \tmovs\tr0, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #920]\t@ 0x398\n+\tldr\tr5, [sp, #952]\t@ 0x3b8\n \tmovs\tr0, r2\n-\tstrh\tr0, [r6, #28]\n+\tstrh\tr0, [r7, #28]\n \tmovs\tr1, r2\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tcmp\tr8, r6\n+\tcmp\tr8, r7\n \tmovs\tr0, r2\n \tldrh\tr4, [r5, #54]\t@ 0x36\n \tmovs\tr3, r3\n-\tldr\tr4, [sp, #152]\t@ 0x98\n+\tldr\tr4, [sp, #184]\t@ 0xb8\n \tmovs\tr0, r2\n-\tcmp\tr2, #10\n+\tcmp\tr2, #22\n \tmovs\tr7, r1\n-\tcmp\tr2, #8\n+\tcmp\tr2, #20\n \tmovs\tr7, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr1, #122\t@ 0x7a\n+\tcmp\tr1, #134\t@ 0x86\n \tmovs\tr7, r1\n-\tcmp\tr1, #120\t@ 0x78\n+\tcmp\tr1, #132\t@ 0x84\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n Contig::priv_buildFASTAQHeaderComment[abi:cxx11](unsigned int, bool):\n ./src/mira/contig_output.C:780\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -1525147,56 +1525147,56 @@\n \tb.n\t2f4912 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x156ade>\n \tb.n\t2f48cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x156a98>\n \tb.n\t2f4888 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x156a54>\n \tldrh\tr4, [r5, #28]\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr0, [r1, #72]\t@ 0x48\n+\tstr\tr0, [r2, #72]\t@ 0x48\n \tmovs\tr2, r2\n \tldrh\tr4, [r6, #26]\n \tmovs\tr3, r3\n-\tldrb\tr4, [r0, #31]\n+\tldrb\tr4, [r1, #31]\n \tmovs\tr1, r2\n \tlsrs\tr4, r6, #8\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #28\n \tmovs\tr0, r0\n-\tldrb\tr0, [r2, #30]\n+\tldrb\tr0, [r3, #30]\n \tmovs\tr1, r2\n-\t\t\t@ instruction: 0xf7be0012\n-\tlsrs\tr4, r5, #2\n+\t\t\t@ instruction: 0xf7c60012\n+\tlsrs\tr4, r6, #2\n \tmovs\tr1, r2\n \tlsrs\tr4, r7, #19\n \tmovs\tr0, r0\n \tlsls\tr4, r2, #30\n \tmovs\tr0, r0\n-\tldrb\tr2, [r1, #26]\n+\tldrb\tr2, [r2, #26]\n \tmovs\tr1, r2\n-\t\t\t@ instruction: 0xf6be0012\n-\tldrb\tr0, [r1, #23]\n+\tmovt\tr0, #26642\t@ 0x6812\n+\tldrb\tr0, [r2, #23]\n \tmovs\tr1, r2\n \tlsls\tr0, r7, #20\n \tmovs\tr0, r0\n \tlsls\tr4, r4, #30\n \tmovs\tr0, r0\n-\tldrb\tr2, [r4, #22]\n+\tldrb\tr2, [r5, #22]\n \tmovs\tr1, r2\n \tldrh\tr2, [r0, #6]\n \tmovs\tr3, r3\n-\tlsls\tr2, r7, #27\n+\tlsls\tr2, r0, #28\n \tmovs\tr1, r2\n-\tldrb\tr0, [r1, #19]\n+\tldrb\tr0, [r2, #19]\n \tmovs\tr1, r2\n-\tadds.w\tr0, r2, #9568256\t@ 0x920000\n-\tcmp\tr0, r6\n+\tadds.w\tr0, sl, #9568256\t@ 0x920000\n+\tcmp\tr4, r7\n \tmovs\tr7, r1\n-\tcmp\tr0, r5\n+\tcmp\tr4, r6\n \tmovs\tr7, r1\n-\tcmp\tr0, r4\n+\tcmp\tr4, r5\n \tmovs\tr7, r1\n Contig::priv_dumpAsFASTA(std::ostream&, bool):\n ./src/mira/contig_output.C:801\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n \tldr\tr2, [pc, #624]\t@ (2f4c04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x156dd0>)\n \tldr\tr3, [pc, #624]\t@ (2f4c08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x156dd4>)\n@@ -1525539,19 +1525539,19 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tb.n\t2f4be2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x156dae>\n \tnop\n \tstrh\tr0, [r1, #46]\t@ 0x2e\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcmp\tr5, #194\t@ 0xc2\n+\tcmp\tr5, #202\t@ 0xca\n \tmovs\tr1, r2\n-\tsubs\tr3, #134\t@ 0x86\n+\tsubs\tr3, #142\t@ 0x8e\n \tmovs\tr0, r2\n-\tsubs\tr2, #170\t@ 0xaa\n+\tsubs\tr2, #178\t@ 0xb2\n \tmovs\tr0, r2\n \tstrh\tr4, [r4, #30]\n \tmovs\tr3, r3\n Contig::priv_dumpAsFASTAQUAL(std::ostream&, bool):\n ./src/mira/contig_output.C:874\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n@@ -1525974,26 +1525974,26 @@\n \tb.n\t2f4ee6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1570b2>\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr2, [r4, #24]\n \tmovs\tr3, r3\n \tstrh\tr0, [r3, #24]\n \tmovs\tr3, r3\n-\tcmp\tr3, #62\t@ 0x3e\n+\tcmp\tr3, #70\t@ 0x46\n \tmovs\tr1, r2\n-\tvqadd.s16\td16, d6, d2\n-\tsubs\tr1, #0\n+\tvqadd.s16\td16, d14, d2\n+\tsubs\tr1, #8\n \tmovs\tr0, r2\n-\tsubs\tr0, #34\t@ 0x22\n+\tsubs\tr0, #42\t@ 0x2a\n \tmovs\tr0, r2\n \tstrh\tr6, [r2, #10]\n \tmovs\tr3, r3\n-\tstrb\tr0, [r4, #21]\n+\tstrb\tr0, [r5, #21]\n \tmovs\tr1, r2\n-\tstrb\tr6, [r2, #21]\n+\tstrb\tr6, [r3, #21]\n \tmovs\tr1, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n operator<<(std::ostream&, Contig const&):\n ./src/mira/contig_output.C:195\n@@ -1526258,25 +1526258,25 @@\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr4, [r2, #31]\n \tmovs\tr3, r3\n \tlsls\tr4, r0, #26\n \tmovs\tr0, r0\n-\tstrb\tr6, [r4, #17]\n+\tstrb\tr6, [r5, #17]\n \tmovs\tr1, r2\n \tldrb\tr6, [r6, #28]\n \tmovs\tr3, r3\n-\tmovs\tr7, #116\t@ 0x74\n+\tmovs\tr7, #124\t@ 0x7c\n \tmovs\tr1, r2\n-\tstrb\tr4, [r1, #14]\n+\tstrb\tr4, [r2, #14]\n \tmovs\tr1, r2\n-\tstrb\tr0, [r1, #14]\n+\tstrb\tr0, [r2, #14]\n \tmovs\tr1, r2\n-\tstrb\tr0, [r0, #14]\n+\tstrb\tr0, [r1, #14]\n \tmovs\tr1, r2\n Contig::priv_dumpReplay(std::basic_ofstream >&, AlignedDualSeqFacts const*, int, int, int, bool, int):\n ./src/mira/contig_output.C:2411\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr.w\tfp, [pc, #824]\t@ 2f54a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15766c>\n \tsub\tsp, #12\n@@ -1526733,48 +1526733,48 @@\n \tb.w\tbcdc >& std::endl >(std::basic_ostream >&)@plt>\n \tldrb\tr6, [r5, #23]\n \tmovs\tr3, r3\n \tlsls\tr4, r0, #26\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #8\n \tmovs\tr0, r0\n-\tstrb\tr2, [r1, #12]\n+\tstrb\tr2, [r2, #12]\n \tmovs\tr1, r2\n-\tstrb\tr2, [r3, #14]\n+\tstrb\tr2, [r4, #14]\n \tmovs\tr1, r2\n-\tstrb\tr4, [r2, #14]\n+\tstrb\tr4, [r3, #14]\n \tmovs\tr1, r2\n-\tlsls\tr4, r7, #5\n+\tlsls\tr4, r0, #6\n \tmovs\tr2, r2\n-\tstrb\tr2, [r4, #13]\n+\tstrb\tr2, [r5, #13]\n \tmovs\tr1, r2\n-\tstrb\tr4, [r6, #12]\n+\tstrb\tr4, [r7, #12]\n \tmovs\tr1, r2\n-\tstrb\tr4, [r6, #12]\n+\tstrb\tr4, [r7, #12]\n \tmovs\tr1, r2\n-\tstrb\tr0, [r7, #12]\n+\tstrb\tr0, [r0, #13]\n \tmovs\tr1, r2\n-\tstrb\tr6, [r5, #12]\n+\tstrb\tr6, [r6, #12]\n \tmovs\tr1, r2\n-\tstrb\tr6, [r5, #12]\n+\tstrb\tr6, [r6, #12]\n \tmovs\tr1, r2\n-\tlsrs\tr4, r5, #26\n+\tlsrs\tr4, r6, #26\n \tmovs\tr2, r2\n-\t\t\t@ instruction: 0xe9920012\n-\tstrb\tr2, [r6, #11]\n+\t\t\t@ instruction: 0xe99a0012\n+\tstrb\tr2, [r7, #11]\n+\tmovs\tr1, r2\n+\tstrb\tr4, [r0, #7]\n \tmovs\tr1, r2\n \tstrb\tr4, [r7, #6]\n \tmovs\tr1, r2\n-\tstrb\tr4, [r6, #6]\n+\tstrb\tr6, [r7, #6]\n \tmovs\tr1, r2\n-\tstrb\tr6, [r6, #6]\n+\tstrb\tr0, [r3, #6]\n \tmovs\tr1, r2\n-\tstrb\tr0, [r2, #6]\n-\tmovs\tr1, r2\n-\tstr\tr4, [r0, #48]\t@ 0x30\n+\tstr\tr4, [r1, #48]\t@ 0x30\n \tmovs\tr1, r2\n Contig::dumpStrainAsFASTAQUAL(std::ostream&, std::ostream&, unsigned int, unsigned char, int, bool, bool):\n ./src/mira/contig_output.C:958\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r1\n \tldr\tr1, [pc, #720]\t@ (2f57cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x157998>)\n \tmov\tr8, r2\n@@ -1527196,27 +1527196,27 @@\n \tb.n\t2f577a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x157946>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t2f57aa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x157976>\n \tldrb\tr0, [r4, #9]\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr2, #82\t@ 0x52\n+\tmovs\tr2, #90\t@ 0x5a\n \tmovs\tr1, r2\n-\tcmp\tr7, #136\t@ 0x88\n+\tcmp\tr7, #144\t@ 0x90\n \tmovs\tr0, r2\n-\tcmp\tr7, #128\t@ 0x80\n+\tcmp\tr7, #136\t@ 0x88\n \tmovs\tr0, r2\n-\tcmp\tr7, #10\n+\tcmp\tr7, #18\n \tmovs\tr0, r2\n \tldrb\tr4, [r7, #0]\n \tmovs\tr3, r3\n-\tcmp\tr6, #184\t@ 0xb8\n+\tcmp\tr6, #192\t@ 0xc0\n \tmovs\tr0, r2\n-\tadds\tr3, #148\t@ 0x94\n+\tadds\tr3, #160\t@ 0xa0\n \tmovs\tr7, r1\n Contig::dumpStrainAsFASTQ(std::ostream&, unsigned int, unsigned char, int, bool, bool):\n ./src/mira/contig_output.C:1007\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r1\n \tldr\tr6, [pc, #644]\t@ (2f5a7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x157c48>)\n \tsub\tsp, #92\t@ 0x5c\n@@ -1527579,15 +1527579,15 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tb.n\t2f5a5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x157c28>\n \tstrb\tr4, [r4, #29]\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #88]\t@ (2f5ae0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x157cac>)\n+\tldr\tr1, [pc, #120]\t@ (2f5b00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x157ccc>)\n \tmovs\tr0, r2\n \tstrb\tr4, [r0, #21]\n \tmovs\tr3, r3\n Contig::dumpTagsAsGFF3(std::ostream&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/contig_output.C:2273\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r0\n@@ -1529183,17 +1529183,17 @@\n \tmovs\tr4, r3\n \tstrb\tr4, [r5, #18]\n \tmovs\tr3, r3\n \tldmia\tr2!, {r3, r5, r7}\n \tmovs\tr4, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [r0, #56]\t@ 0x38\n+\tldr\tr4, [r1, #56]\t@ 0x38\n \tmovs\tr1, r2\n-\tstrh\tr0, [r2, #14]\n+\tstrh\tr0, [r3, #14]\n \tmovs\tr0, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tldmia\tr1!, {r2, r3}\n \tmovs\tr4, r3\n@@ -1529215,37 +1529215,37 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #4\n \tmovs\tr0, r0\n-\tlsls\tr0, r7, #22\n+\tlsls\tr0, r0, #23\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tasrs\tr0, r1, #1\n \tmovs\tr0, r0\n-\tlsrs\tr2, r6, #16\n+\tlsrs\tr2, r7, #16\n \tmovs\tr1, r2\n \tstmia\tr5!, {r2, r4, r6}\n \tmovs\tr4, r3\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tldrb\tr6, [r7, #30]\n \tmovs\tr3, r3\n-\tstr\tr6, [r1, #92]\t@ 0x5c\n+\tstr\tr6, [r2, #92]\t@ 0x5c\n \tmovs\tr1, r2\n \tldr\tr6, [r1, #92]\t@ 0x5c\n \tmovs\tr3, r3\n-\tstrb\tr6, [r7, r7]\n+\tldrsb\tr6, [r0, r0]\n \tmovs\tr1, r2\n \tstmia\tr3!, {r2, r4, r5, r7}\n \tmovs\tr4, r3\n \tldrb\tr2, [r4, #24]\n \tmovs\tr3, r3\n \tlsrs\tr0, r1, #8\n \tmovs\tr0, r0\n@@ -1529253,32 +1529253,32 @@\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #20\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #13\n \tmovs\tr0, r0\n-\tadds\tr0, #188\t@ 0xbc\n+\tadds\tr0, #200\t@ 0xc8\n \tmovs\tr7, r1\n-\tadds\tr0, #182\t@ 0xb6\n+\tadds\tr0, #194\t@ 0xc2\n \tmovs\tr7, r1\n-\tmov\tlr, lr\n+\tmov\tlr, pc\n \tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #30\n \tmovs\tr0, r0\n-\tvhadd.u8\td16, d12, d15\n+\tvhadd.u16\td16, d4, d15\n \tlsrs\tr4, r1, #3\n \tmovs\tr0, r0\n \tlsrs\tr0, r5, #9\n \tmovs\tr0, r0\n-\tstr\tr2, [r1, #8]\n+\tstr\tr2, [r2, #8]\n \tmovs\tr1, r2\n-\tstr\tr0, [r1, #8]\n+\tstr\tr0, [r2, #8]\n \tmovs\tr1, r2\n \tlsls\tr4, r6, #21\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.h:6174 (discriminator 2)\n \tldr\tr1, [sp, #20]\n \tldr\tr3, [r1, #36]\t@ 0x24\n \tldr\tr1, [r1, #32]\n@@ -1529960,65 +1529960,65 @@\n \tmovs\tr3, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r3, #88]\t@ 0x58\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr0, #196\t@ 0xc4\n+\tcmp\tr0, #204\t@ 0xcc\n \tmovs\tr1, r2\n-\tldrb\tr6, [r7, r2]\n+\tldrb\tr6, [r0, r3]\n \tmovs\tr1, r2\n-\tldrb\tr2, [r6, r2]\n+\tldrb\tr2, [r7, r2]\n \tmovs\tr1, r2\n-\tldrb\tr6, [r4, r2]\n+\tldrb\tr6, [r5, r2]\n \tmovs\tr1, r2\n-\tldrb\tr2, [r3, r2]\n+\tldrb\tr2, [r4, r2]\n \tmovs\tr1, r2\n-\tldrb\tr6, [r1, r2]\n+\tldrb\tr6, [r2, r2]\n \tmovs\tr1, r2\n-\tldrb\tr2, [r0, r2]\n+\tldrb\tr2, [r1, r2]\n \tmovs\tr1, r2\n-\tldrb\tr6, [r6, r1]\n+\tldrb\tr6, [r7, r1]\n \tmovs\tr1, r2\n-\tldrb\tr2, [r5, r1]\n+\tldrb\tr2, [r6, r1]\n \tmovs\tr1, r2\n-\tldrb\tr0, [r4, r1]\n+\tldrb\tr0, [r5, r1]\n \tmovs\tr1, r2\n-\tldrb\tr2, [r2, r1]\n+\tldrb\tr2, [r3, r1]\n \tmovs\tr1, r2\n-\tldrb\tr4, [r7, r0]\n+\tldrb\tr4, [r0, r1]\n \tmovs\tr1, r2\n-\tldrb\tr6, [r4, r0]\n+\tldrb\tr6, [r5, r0]\n \tmovs\tr1, r2\n-\tldrb\tr2, [r3, r0]\n+\tldrb\tr2, [r4, r0]\n \tmovs\tr1, r2\n-\tldrb\tr6, [r1, r0]\n+\tldrb\tr6, [r2, r0]\n \tmovs\tr1, r2\n-\tldrb\tr2, [r0, r0]\n+\tldrb\tr2, [r1, r0]\n \tmovs\tr1, r2\n-\tldrh\tr6, [r6, r7]\n+\tldrh\tr6, [r7, r7]\n \tmovs\tr1, r2\n-\tldrh\tr2, [r5, r7]\n+\tldrh\tr2, [r6, r7]\n \tmovs\tr1, r2\n-\tldrh\tr6, [r3, r7]\n+\tldrh\tr6, [r4, r7]\n \tmovs\tr1, r2\n-\tldrh\tr2, [r2, r7]\n+\tldrh\tr2, [r3, r7]\n+\tmovs\tr1, r2\n+\tldrh\tr6, [r1, r7]\n \tmovs\tr1, r2\n \tldrh\tr6, [r0, r7]\n \tmovs\tr1, r2\n \tldrh\tr6, [r7, r6]\n \tmovs\tr1, r2\n-\tldrh\tr6, [r6, r6]\n-\tmovs\tr1, r2\n-\tldrh\tr4, [r5, r6]\n+\tldrh\tr4, [r6, r6]\n \tmovs\tr1, r2\n-\tldrh\tr2, [r4, r6]\n+\tldrh\tr2, [r5, r6]\n \tmovs\tr1, r2\n-\tldrh\tr4, [r2, r6]\n+\tldrh\tr4, [r3, r6]\n \tmovs\tr1, r2\n \tstr\tr4, [r3, #52]\t@ 0x34\n \tmovs\tr3, r3\n void std::deque >::_M_push_back_aux(multitag_t const&):\n /usr/include/c++/10/bits/deque.tcc:481\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r1\n@@ -1530181,15 +1530181,15 @@\n \tb.n\t2f6d5e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x158f2a>\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #8]\t@ (2f6db8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x158f84>)\n \tadd\tr0, pc\n \tblx\tb6dc \n /usr/include/c++/10/ext/new_allocator.h:106\n \tblx\tb0c8 \n-\tlsls\tr6, r3, #6\n+\tlsls\tr2, r5, #6\n \tmovs\tr7, r1\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r0\n \tldr\tr5, [pc, #1004]\t@ (2f71b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15937c>)\n \tvpush\t{d8}\n@@ -1531683,25 +1531683,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #15\n \tmovs\tr0, r0\n \tldr\tr2, [r3, r3]\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrb\tr2, [r7, #29]\n+\tldrb\tr6, [r0, #30]\n \tmovs\tr7, r1\n-\tstrh\tr4, [r7, #2]\n+\tstrh\tr0, [r1, #4]\n \tmovs\tr7, r1\n-\tstrh\tr2, [r4, #4]\n+\tstrh\tr6, [r5, #4]\n \tmovs\tr7, r1\n-\tstrh\tr0, [r3, #6]\n+\tstrh\tr4, [r4, #6]\n \tmovs\tr7, r1\n-\tstrh\tr2, [r5, #10]\n+\tstrh\tr6, [r6, #10]\n \tmovs\tr7, r1\n-\tstrh\tr0, [r2, #12]\n+\tstrh\tr4, [r3, #12]\n \tmovs\tr7, r1\n \tlsls\tr0, r4, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #11\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n@@ -1533011,63 +1533011,63 @@\n \tmovs\tr0, r0\n \tstrb\tr4, [r4, r4]\n \tmovs\tr3, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #968]\t@ (2f8888 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15aa54>)\n+\tldr\tr4, [pc, #1000]\t@ (2f88a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15aa74>)\n \tmovs\tr1, r2\n-\tsubs\tr4, r1, #0\n+\tsubs\tr4, r2, #0\n \tmovs\tr0, r2\n-\tlsrs\tr0, r0, #13\n+\tlsrs\tr0, r1, #13\n \tmovs\tr0, r2\n-\tadds\tr2, r5, #7\n+\tadds\tr2, r6, #7\n \tmovs\tr0, r2\n-\tadds\tr0, r2, #7\n+\tadds\tr0, r3, #7\n \tmovs\tr0, r2\n-\tadds\tr0, r0, #7\n+\tadds\tr0, r1, #7\n \tmovs\tr0, r2\n-\tadds\tr0, r6, #6\n+\tadds\tr0, r7, #6\n \tmovs\tr0, r2\n-\tadds\tr0, r4, #6\n+\tadds\tr0, r5, #6\n \tmovs\tr0, r2\n-\tadds\tr0, r2, #6\n+\tadds\tr0, r3, #6\n \tmovs\tr0, r2\n-\tadds\tr2, r0, #6\n+\tadds\tr2, r1, #6\n \tmovs\tr0, r2\n-\tadds\tr4, r6, #5\n+\tadds\tr4, r7, #5\n \tmovs\tr0, r2\n-\tadds\tr4, r4, #5\n+\tadds\tr4, r5, #5\n \tmovs\tr0, r2\n-\tbvc.n\t2f841c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15a5e8>\n+\tbvc.n\t2f842c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15a5f8>\n \tmovs\tr1, r2\n-\tadds\tr4, r5, #4\n+\tadds\tr4, r6, #4\n \tmovs\tr0, r2\n-\tadds\tr4, r4, #4\n+\tadds\tr4, r5, #4\n \tmovs\tr0, r2\n-\tadds\tr2, r2, #4\n+\tadds\tr2, r3, #4\n \tmovs\tr0, r2\n-\tadds\tr2, r0, #4\n+\tadds\tr2, r1, #4\n \tmovs\tr0, r2\n-\tadds\tr2, r6, #3\n+\tadds\tr2, r7, #3\n \tmovs\tr0, r2\n-\tadds\tr2, r4, #3\n+\tadds\tr2, r5, #3\n \tmovs\tr0, r2\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t2f8590 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15a75c>\n+\tb.n\t2f85a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15a76c>\n \tmovs\tr7, r1\n \tlsrs\tr4, r2, #6\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1534736,57 +1534736,57 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr6, r4, #16\n+\tlsrs\tr2, r6, #16\n \tmovs\tr7, r1\n-\tlsrs\tr0, r4, #16\n+\tlsrs\tr4, r5, #16\n \tmovs\tr7, r1\n-\tmovs\tr2, #94\t@ 0x5e\n+\tmovs\tr2, #102\t@ 0x66\n \tmovs\tr1, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsrs\tr6, r1, #12\n+\tlsrs\tr2, r3, #12\n \tmovs\tr7, r1\n-\tlsrs\tr0, r0, #12\n+\tlsrs\tr4, r1, #12\n \tmovs\tr7, r1\n-\tadds\tr2, #204\t@ 0xcc\n+\tadds\tr2, #212\t@ 0xd4\n \tmovs\tr1, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tlsrs\tr0, r2, #6\n+\tlsrs\tr4, r3, #6\n \tmovs\tr7, r1\n-\tlsrs\tr2, r0, #6\n+\tlsrs\tr6, r1, #6\n \tmovs\tr7, r1\n-\tadds\tr1, #78\t@ 0x4e\n+\tadds\tr1, #86\t@ 0x56\n \tmovs\tr1, r2\n-\tlsrs\tr0, r1, #1\n+\tlsrs\tr4, r2, #1\n \tmovs\tr7, r1\n-\tlsrs\tr2, r7, #32\n+\tlsrs\tr6, r0, #1\n \tmovs\tr7, r1\n-\tadds\tr0, #6\n+\tadds\tr0, #14\n \tmovs\tr1, r2\n-\tlsls\tr2, r6, #19\n+\tlsls\tr6, r7, #19\n \tmovs\tr7, r1\n-\tlsls\tr6, r4, #19\n+\tlsls\tr2, r6, #19\n \tmovs\tr7, r1\n-\tcmp\tr4, #180\t@ 0xb4\n+\tcmp\tr4, #188\t@ 0xbc\n \tmovs\tr1, r2\n-\tlsls\tr4, r0, #14\n+\tlsls\tr0, r2, #14\n \tmovs\tr7, r1\n-\tlsls\tr0, r0, #14\n+\tlsls\tr4, r1, #14\n \tmovs\tr7, r1\n-\tadds\tr0, r0, r7\n+\tadds\tr0, r1, r7\n \tmovs\tr1, r2\n Contig::findBestPairConsistencyRange():\n ./src/mira/contig_pairconsistency.C:36\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_pair.h:353\n \tmovs\tr7, #0\n ./src/mira/contig_pairconsistency.C:36\n@@ -1536336,46 +1536336,46 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tvaddl.u8\tq8, d14, d14\n-\tvaddl.u8\tq8, d0, d14\n-\tmovs\tr7, #140\t@ 0x8c\n+\tvaddl.u16\tq8, d10, d14\n+\tvaddl.u8\tq8, d12, d14\n+\tmovs\tr7, #148\t@ 0x94\n \tmovs\tr1, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr2, #216\t@ 0xd8\n+\tadds\tr2, #224\t@ 0xe0\n \tmovs\tr1, r2\n-\t\t\t@ instruction: 0x47ba\n+\t\t\t@ instruction: 0x47c2\n \tmovs\tr0, r2\n \tsubs\tr0, #240\t@ 0xf0\n \tmovs\tr3, r3\n-\tadds\tr0, #216\t@ 0xd8\n+\tadds\tr0, #224\t@ 0xe0\n \tmovs\tr1, r2\n-\tcmp\tr2, #178\t@ 0xb2\n+\tcmp\tr2, #186\t@ 0xba\n \tmovs\tr1, r2\n-\tcmp\tr2, #164\t@ 0xa4\n+\tcmp\tr2, #172\t@ 0xac\n \tmovs\tr1, r2\n-\tvhadd.s\td0, d8, d14\n-\tcmp\tr2, #18\n+\tvhadd.s8\td16, d4, d14\n+\tcmp\tr2, #26\n \tmovs\tr1, r2\n-\tadds\tr6, #98\t@ 0x62\n+\tadds\tr6, #110\t@ 0x6e\n \tmovs\tr7, r1\n-\tcmp\tr0, #180\t@ 0xb4\n+\tcmp\tr0, #188\t@ 0xbc\n \tmovs\tr1, r2\n-\tadds\tr5, #24\n+\tadds\tr5, #36\t@ 0x24\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, r5\n \tblx\tb51c ::_M_widen_init() const@plt>\n /usr/include/c++/10/bits/locale_facets.h:877\n@@ -1537774,27 +1537774,27 @@\n \tmovs\tr1, #10\n \tblx\tr5\n \tmov\tr1, r0\n \tb.n\t2fa4ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15c67a>\n \tnop\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr3, #156\t@ 0x9c\n+\tmovs\tr3, #164\t@ 0xa4\n \tmovs\tr1, r2\n-\tmovs\tr3, #104\t@ 0x68\n+\tmovs\tr3, #112\t@ 0x70\n \tmovs\tr1, r2\n-\tmovs\tr3, #48\t@ 0x30\n+\tmovs\tr3, #56\t@ 0x38\n \tmovs\tr1, r2\n-\tmovs\tr3, #82\t@ 0x52\n+\tmovs\tr3, #90\t@ 0x5a\n \tmovs\tr1, r2\n-\tsubs\tr0, #126\t@ 0x7e\n+\tsubs\tr0, #134\t@ 0x86\n \tmovs\tr0, r2\n-\tadds\tr7, #240\t@ 0xf0\n+\tadds\tr7, #248\t@ 0xf8\n \tmovs\tr0, r2\n-\tmovs\tr2, #124\t@ 0x7c\n+\tmovs\tr2, #132\t@ 0x84\n \tmovs\tr1, r2\n ./src/mira/contig_pairconsistency.C:255\n \tldr\tr2, [sp, #116]\t@ 0x74\n /usr/include/c++/10/bits/stl_vector.h:680\n \tmov\tr7, r2\n ./src/mira/contig_pairconsistency.C:255\n \tcmp\tr2, #0\n@@ -1540295,57 +1540295,57 @@\n \tstrd\tr7, r7, [r0, #80]\t@ 0x50\n \tstrd\tr7, r7, [r0, #88]\t@ 0x58\n /usr/include/c++/10/bits/stl_uninitialized.h:566\n \tadds\tr0, #96\t@ 0x60\n \tcmp\tr4, r0\n \tbne.n\t2fbe46 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e012>\n \tb.w\t2f9bc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15bd90>\n-\tasrs\tr6, r4, #20\n+\tasrs\tr6, r5, #20\n \tmovs\tr1, r2\n-\tasrs\tr2, r6, #19\n+\tasrs\tr2, r7, #19\n \tmovs\tr1, r2\n-\tasrs\tr0, r2, #18\n+\tasrs\tr0, r3, #18\n \tmovs\tr1, r2\n-\tasrs\tr4, r3, #17\n+\tasrs\tr4, r4, #17\n \tmovs\tr1, r2\n-\tasrs\tr0, r6, #15\n+\tasrs\tr0, r7, #15\n \tmovs\tr1, r2\n-\tasrs\tr2, r7, #14\n+\tasrs\tr2, r0, #15\n \tmovs\tr1, r2\n-\tasrs\tr2, r0, #14\n+\tasrs\tr2, r1, #14\n \tmovs\tr1, r2\n-\tasrs\tr6, r5, #12\n+\tasrs\tr6, r6, #12\n \tmovs\tr1, r2\n-\tbhi.n\t2fbf58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e124>\n+\tbhi.n\t2fbf70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e13c>\n \tmovs\tr6, r1\n-\tcmp\tr0, #118\t@ 0x76\n+\tcmp\tr0, #126\t@ 0x7e\n \tmovs\tr0, r2\n-\tcmp\tr0, #88\t@ 0x58\n+\tcmp\tr0, #96\t@ 0x60\n \tmovs\tr0, r2\n-\tasrs\tr4, r1, #9\n+\tasrs\tr4, r2, #9\n \tmovs\tr1, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tasrs\tr6, r0, #7\n+\tasrs\tr6, r1, #7\n \tmovs\tr1, r2\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tble.n\t2fbe84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e050>\n+\tble.n\t2fbe9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e068>\n \tmovs\tr6, r1\n-\tble.n\t2fbe6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e038>\n+\tble.n\t2fbe84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e050>\n \tmovs\tr6, r1\n-\tlsls\tr0, r3, #22\n+\tlsls\tr0, r4, #22\n \tmovs\tr1, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1541282,34 +1541282,34 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbmi.n\t2fc5e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e7ac>\n+\tbmi.n\t2fc5f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e7c4>\n \tmovs\tr6, r1\n-\tbmi.n\t2fc5c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e794>\n+\tbmi.n\t2fc5e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e7ac>\n \tmovs\tr6, r1\n-\tldc2\t0, cr0, [sl], {16}\n+\tstc2\t0, cr0, [r2], #64\t@ 0x40\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #352\t@ 0x160\n+\tadd\tr0, sp, #400\t@ 0x190\n \tmovs\tr6, r1\n-\tadd\tr0, sp, #320\t@ 0x140\n+\tadd\tr0, sp, #368\t@ 0x170\n \tmovs\tr6, r1\n-\tadd\tr0, sp, #288\t@ 0x120\n+\tadd\tr0, sp, #336\t@ 0x150\n \tmovs\tr6, r1\n-\tadd\tr7, pc, #952\t@ (adr r7, 2fca08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15ebd4>)\n+\tadd\tr7, pc, #1000\t@ (adr r7, 2fca38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15ec04>)\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n std::vector >, std::allocator > > >::~vector():\n /usr/include/c++/10/bits/stl_vector.h:678\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n@@ -1541495,15 +1541495,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t2fc710 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e8dc>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2fc7d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15e9a0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr4, pc, #352\t@ (adr r4, 2fc938 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15eb04>)\n+\tadd\tr4, pc, #400\t@ (adr r4, 2fc968 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15eb34>)\n \tmovs\tr6, r1\n std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned int, unsigned long long const&):\n /usr/include/c++/10/bits/vector.tcc:512\n \tcmp\tr2, #0\n \tbeq.n\t2fc8c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15ea8c>\n /usr/include/c++/10/bits/vector.tcc:509\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1541895,15 +1541895,15 @@\n \tlsls\tr5, r5, #3\n \tb.n\t2fcae4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15ecb0>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (2fcb14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15ece0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldmia\tr2!, {r5, r6}\n+\tldmia\tr2, {r2, r3, r5, r6}\n \tmovs\tr6, r1\n void std::_Destroy_aux::__destroy >*>(std::vector >*, std::vector >*):\n /usr/include/c++/10/bits/stl_construct.h:149\n \tpush\t{r3, r4, r5, lr}\n /usr/include/c++/10/bits/stl_construct.h:151\n \tcmp\tr0, r1\n /usr/include/c++/10/bits/stl_construct.h:149\n@@ -1542431,20 +1542431,20 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsls\tr0, r3, #7\n \tmovs\tr3, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr7, #6\n+\tadds\tr7, #14\n \tmovs\tr0, r2\n-\tldrd\tr0, r0, [r0, #64]!\t@ 0x40\n-\tmovs\tr1, #118\t@ 0x76\n+\tldrd\tr0, r0, [r8, #64]!\t@ 0x40\n+\tmovs\tr1, #130\t@ 0x82\n \tmovs\tr7, r1\n-\tmovs\tr1, #34\t@ 0x22\n+\tmovs\tr1, #46\t@ 0x2e\n \tmovs\tr7, r1\n DataProcessing::poolskim_t::~poolskim_t():\n ./src/mira/dataprocessing.C:74\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n ./src/mira/dataprocessing.C:75\n \tldr\tr5, [r0, #0]\n@@ -1543266,26 +1543266,26 @@\n \tmovs\tr4, r3\n \t\t\t@ instruction: 0xfbe0001a\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xfbda001a\n \t\t\t@ instruction: 0xfbc8001a\n \t\t\t@ instruction: 0xfb9a001a\n-\t\t\t@ instruction: 0xb88a\n+\t\t\t@ instruction: 0xb896\n \tmovs\tr6, r1\n \tstr\tr4, [r5, r6]\n \tmovs\tr4, r3\n \tstr\tr4, [r3, r6]\n \tmovs\tr4, r3\n \tsmladx\tr0, r2, sl, r0\n \tstr\tr4, [r6, r5]\n \tmovs\tr4, r3\n-\t\t\t@ instruction: 0xb6a0\n+\t\t\t@ instruction: 0xb6ac\n \tmovs\tr6, r1\n-\tadds\tr5, #122\t@ 0x7a\n+\tadds\tr5, #134\t@ 0x86\n \tmovs\tr7, r1\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n \tstr\tr6, [r5, r4]\n \tmovs\tr4, r3\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n@@ -1543841,18 +1543841,18 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t2fd8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x15fac8>\n \t\t\t@ instruction: 0xf7ac001a\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf79c001a\n \t\t\t@ instruction: 0xf784001a\n-\tadds\tr6, #186\t@ 0xba\n+\tadds\tr6, #198\t@ 0xc6\n \tmovs\tr7, r1\n-\teor.w\tr0, r4, #16\n-\torn\tr0, sl, #16\n+\teor.w\tr0, ip, #16\n+\torns\tr0, r2, #16\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n DataProcessing::searchPolyBaseFrom5Prime(Read&, char, int&, int&, unsigned int, unsigned int, int):\n ./src/mira/dataprocessing.C:2122\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1544381,30 +1544381,30 @@\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf610001a\n \tlsrs\tr0, r6, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #14\n \tmovs\tr0, r0\n \tbic.w\tr0, r6, #10092544\t@ 0x9a0000\n-\tstcl\t0, cr0, [sl, #64]!\t@ 0x40\n-\tldcl\t0, cr0, [lr, #64]\t@ 0x40\n-\tstcl\t0, cr0, [r4, #64]\t@ 0x40\n+\tldcl\t0, cr0, [r2, #64]!\t@ 0x40\n+\tstcl\t0, cr0, [r6, #64]!\t@ 0x40\n+\tstcl\t0, cr0, [ip, #64]\t@ 0x40\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmrc\t0, 1, r0, cr14, cr0, {0}\n-\tldmia\tr0!, {r1, r5, r7}\n+\tmcr\t0, 2, r0, cr6, cr0, {0}\n+\tldmia\tr0!, {r1, r3, r5, r7}\n \tmovs\tr7, r1\n-\tldcl\t0, cr0, [r0, #-64]\t@ 0xffffffc0\n+\tldcl\t0, cr0, [r8, #-64]\t@ 0xffffffc0\n+\tldcl\t0, cr0, [sl, #64]\t@ 0x40\n \tldcl\t0, cr0, [r2, #64]\t@ 0x40\n-\tstcl\t0, cr0, [sl, #64]\t@ 0x40\n-\tldmia\tr6, {r1, r3, r5, r6, r7}\n+\tldmia\tr6, {r1, r4, r5, r6, r7}\n \tmovs\tr0, r2\n-\tstcl\t0, cr0, [r8], {16}\n+\tldcl\t0, cr0, [r0], {16}\n DataProcessing::searchPolyBaseFrom3Prime(Read&, char, int&, int&, unsigned int, unsigned int, int):\n ./src/mira/dataprocessing.C:2200\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n \tldr\tr4, [pc, #956]\t@ (2fe130 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1602fc>)\n \tldr\tr0, [pc, #956]\t@ (2fe134 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160300>)\n \tsub\tsp, #252\t@ 0xfc\n@@ -1544936,30 +1544936,30 @@\n \tlsrs\tr0, r6, #4\n \tmovs\tr0, r0\n \tlsrs\tr0, r4, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r2, #14\n \tmovs\tr0, r0\n \teors.w\tr0, r0, #26\n-\tldrd\tr0, r0, [sl, #64]\t@ 0x40\n-\tstrd\tr0, r0, [lr, #64]\t@ 0x40\n-\teor.w\tr0, ip, r0, lsr #32\n+\tstrd\tr0, r0, [r2, #64]!\t@ 0x40\n+\tldrd\tr0, r0, [r6, #64]\t@ 0x40\n+\teors.w\tr0, r4, r0, lsr #32\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbics.w\tr0, r2, r0, lsr #32\n-\tstmia\tr4!, {r1, r2, r4, r7}\n+\tbics.w\tr0, sl, r0, lsr #32\n+\tstmia\tr4!, {r1, r2, r3, r4, r7}\n \tmovs\tr7, r1\n-\tands.w\tr0, ip, r0, lsr #32\n+\tbic.w\tr0, r4, r0, lsr #32\n+\tstrd\tr0, r0, [lr, #64]\t@ 0x40\n \tstrd\tr0, r0, [r6, #64]\t@ 0x40\n-\t\t\t@ instruction: 0xe9be0010\n-\tldmia\tr2, {r1, r2, r3, r4, r6, r7}\n+\tldmia\tr2, {r1, r2, r5, r6, r7}\n \tmovs\tr0, r2\n-\t\t\t@ instruction: 0xe9940010\n+\t\t\t@ instruction: 0xe99c0010\n DataProcessing::priv_stp_helperDebris(std::vector >&, ReadPool&, Read&, int, std::vector >*, unsigned char):\n ./src/mira/dataprocessing.C:2638\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r3\n \tldr\tr1, [pc, #336]\t@ (2fe2d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1604a0>)\n \tsub\tsp, #232\t@ 0xe8\n \tldr\tr3, [pc, #336]\t@ (2fe2d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1604a4>)\n@@ -1545147,17 +1545147,17 @@\n \tldcl\t0, cr0, [r8, #104]\t@ 0x68\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldcl\t0, cr0, [r2, #104]\t@ 0x68\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldcl\t0, cr0, [sl, #-104]\t@ 0xffffff98\n-\t\t\t@ instruction: 0xe8c20010\n-\tldmia.w\tr6!, {r4}\n-\tstmia.w\tr0!, {r4}\n+\t\t\t@ instruction: 0xe8ca0010\n+\tldmia.w\tlr!, {r4}\n+\tstmia.w\tr8!, {r4}\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n DataProcessing::badSequenceSearch_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1942\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -1545244,15 +1545244,15 @@\n \tldrb.w\tr0, [r5, #151]\t@ 0x97\n \tbl\t29b24 \n \tb.n\t2fe36c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160538>\n \tnop\n \tmrrc\t0, 1, r0, r6, cr10\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia.w\tlr, {r4}\n+\tstmia.w\tr6!, {r4}\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n DataProcessing::markReadsWithInvalidKMerEndsAsChimeras_Pool(ReadPool&, unsigned int, bool, std::vector >*, std::vector >&, std::vector >&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:118\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr\tr4, [pc, #572]\t@ (2fe5f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1607c4>)\n@@ -1545565,29 +1545565,29 @@\n \tb.n\t2fe57a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160746>\n ./src/mira/dataprocessing.C:166\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tsub.w\tr0, r0, sl, lsr #32\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xeb98001a\n-\t\t\t@ instruction: 0xe80a0010\n-\tb.n\t2fe5cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160798>\n+\t\t\t@ instruction: 0xe8120010\n+\tb.n\t2fe5dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1607a8>\n \tmovs\tr0, r2\n-\tb.n\t2fe5c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160794>\n+\tb.n\t2fe5d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1607a4>\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tadd.w\tr0, r6, sl, lsr #32\n-\tb.n\t2fe424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1605f0>\n+\tb.n\t2fe434 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160600>\n \tmovs\tr0, r2\n-\tldrsb\tr0, [r0, r5]\n+\tldrsb\tr0, [r1, r5]\n \tmovs\tr2, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstr\tr0, [r6, #44]\t@ 0x2c\n+\tstr\tr0, [r7, #44]\t@ 0x2c\n \tmovs\tr0, r2\n DataProcessing::markReadsWithRareKMersAsChimeras_Pool(ReadPool&, unsigned int, bool, std::vector >*, std::vector >&, std::vector >&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:252\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr\tr4, [pc, #572]\t@ (2fe86c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160a38>)\n \tldr\tr1, [pc, #572]\t@ (2fe870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160a3c>)\n@@ -1545899,30 +1545899,30 @@\n \tb.n\t2fe7ee , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1609ba>\n ./src/mira/dataprocessing.C:300\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tstmdb\tip!, {r1, r3, r4}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmdb\tr4!, {r1, r3, r4}\n-\tb.n\t2fe3a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160574>\n-\tmovs\tr0, r2\n \tb.n\t2fe3b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160584>\n \tmovs\tr0, r2\n-\tb.n\t2fe3b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160580>\n+\tb.n\t2fe3c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160594>\n+\tmovs\tr0, r2\n+\tb.n\t2fe3c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160590>\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldmia.w\tr2, {r1, r3, r4}\n-\tb.n\t2fe1b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16037c>\n+\tb.n\t2fe1c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16038c>\n \tmovs\tr0, r2\n-\tstrb\tr4, [r1, r3]\n+\tstrb\tr4, [r2, r3]\n \tmovs\tr2, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstr\tr4, [r7, #4]\n+\tstr\tr4, [r0, #8]\n \tmovs\tr0, r2\n DataProcessing::clipBadSolexaEnds_Read(Read&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1474\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r1\n \tldr\tr4, [pc, #588]\t@ (2feaf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160cbc>)\n \tsub\tsp, #28\n@@ -1546222,25 +1546222,25 @@\n \teors\tr1, r3\n \tb.n\t2fe860 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160a2c>\n \tmovs\tr2, r3\n \tb.n\t2fe860 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160a2c>\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tb.n\t2ff074 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161240>\n+\tb.n\t2ff084 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161250>\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tb.n\t2ff028 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1611f4>\n+\tb.n\t2ff038 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161204>\n \tmovs\tr0, r2\n \tb.n\t2fe5a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160770>\n \tmovs\tr2, r3\n-\tb.n\t2feeb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16107c>\n+\tb.n\t2feec0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16108c>\n \tmovs\tr0, r2\n-\tb.n\t2fee6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161038>\n+\tb.n\t2fee7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161048>\n \tmovs\tr0, r2\n DataProcessing::clipBadSolexaEnds_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1452\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr.w\tsl, [pc, #168]\t@ 2febc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160d90>\n /usr/include/c++/10/bits/stl_vector.h:919\n@@ -1546465,17 +1546465,17 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t2ff39c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161568>\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tb.n\t2fed70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160f3c>\n+\tb.n\t2fed80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x160f4c>\n \tmovs\tr0, r2\n-\tstrb\tr2, [r0, #4]\n+\tstrb\tr2, [r1, #4]\n \tmovs\tr1, r2\n \tb.n\t2ff24c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161418>\n \tmovs\tr2, r3\n DataProcessing::lowerCaseClippingBack_Read(Read&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1628\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r1\n@@ -1546608,17 +1546608,17 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t2ff284 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161450>\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tsvc\t88\t@ 0x58\n+\tsvc\t96\t@ 0x60\n \tmovs\tr0, r2\n-\tldr\tr4, [r6, #124]\t@ 0x7c\n+\tldr\tr4, [r7, #124]\t@ 0x7c\n \tmovs\tr1, r2\n \tb.n\t2ff13c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161308>\n \tmovs\tr2, r3\n DataProcessing::lowerCaseClipping_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1557\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n@@ -1546928,15 +1546928,15 @@\n \tnop\n \tb.n\t2ff31c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1614e8>\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbgt.n\t2fefb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161180>\n+\tbgt.n\t2fefc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161190>\n \tmovs\tr0, r2\n DataProcessing::qualClips_Read(Read&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1675\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr3, [pc, #380]\t@ (2ff1ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1613b8>)\n \tsub\tsp, #28\n@@ -1547153,19 +1547153,19 @@\n \tmovs\tr2, r3\n \tudf\t#214\t@ 0xd6\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbgt.n\t2ff258 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161424>\n+\tbgt.n\t2ff268 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161434>\n \tmovs\tr0, r2\n-\tbgt.n\t2ff234 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161400>\n+\tbgt.n\t2ff244 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161410>\n \tmovs\tr0, r2\n-\tblt.n\t2ff1f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1613c0>\n+\tblt.n\t2ff204 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1613d0>\n \tmovs\tr0, r2\n \tble.n\t2ff1a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161370>\n \tmovs\tr2, r3\n \tble.n\t2ff158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161324>\n \tmovs\tr2, r3\n DataProcessing::qualClips_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1656\n@@ -1547281,15 +1547281,15 @@\n \tbl\t2ff068 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161234>\n \tb.n\t2ff272 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16143e>\n \tnop\n \tble.n\t2ff368 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161534>\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tblt.n\t2ff360 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16152c>\n+\tblt.n\t2ff370 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16153c>\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n DataProcessing::maskClips_Read(Read&, std::__cxx11::basic_string, std::allocator > const&, int, int, int):\n ./src/mira/dataprocessing.C:1733\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/dataprocessing.C:1736\n@@ -1547651,29 +1547651,29 @@\n \tb.w\t1d8030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x3a1fc>\n \tbgt.n\t2ff654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161820>\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbgt.n\t2ff654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161820>\n \tmovs\tr2, r3\n-\tldr\tr0, [pc, #760]\t@ (2ff89c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161a68>)\n+\tldr\tr0, [pc, #792]\t@ (2ff8bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161a88>)\n \tmovs\tr2, r2\n-\tbls.n\t2ff560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16172c>\n+\tbls.n\t2ff570 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16173c>\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldrsh\tr0, [r1, r6]\n+\tldrsh\tr0, [r2, r6]\n \tmovs\tr1, r2\n-\tbls.n\t2ff4c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161694>\n+\tbls.n\t2ff4d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1616a4>\n \tmovs\tr0, r2\n-\tbls.n\t2ff684 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161850>\n+\tbls.n\t2ff694 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161860>\n \tmovs\tr0, r2\n \tbge.n\t2ff584 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161750>\n \tmovs\tr2, r3\n-\tldr\tr4, [r0, #52]\t@ 0x34\n+\tldr\tr4, [r1, #52]\t@ 0x34\n \tmovs\tr7, r1\n \tbge.n\t2ff524 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1616f0>\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tbls.n\t2ff5a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16176c>\n \tmovs\tr2, r3\n@@ -1547795,15 +1547795,15 @@\n \tbl\t2ff2f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1614c0>\n \tb.n\t2ff62e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1617fa>\n \tnop\n \tbls.n\t2ff5b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161784>\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbvc.n\t2ff7ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161978>\n+\tbvc.n\t2ff5bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161788>\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n DataProcessing::minimumQualityThreshold_Read(Read&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1821\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n@@ -1548084,15 +1548084,15 @@\n \tmovs\tr2, r3\n \tbhi.n\t2ff7c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16198c>\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbpl.n\t2ff8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161ac8>\n+\tbpl.n\t2ff90c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161ad8>\n \tmovs\tr0, r2\n \tbvs.n\t2ff888 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161a54>\n \tmovs\tr2, r3\n DataProcessing::minimumQualityThreshold_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1790\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n@@ -1548208,21 +1548208,21 @@\n \tmov.w\tfp, #0\n \tb.n\t2ff93a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161b06>\n \tnop\n \tbvs.n\t2ff8bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161a88>\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbmi.n\t2ff964 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161b30>\n+\tbmi.n\t2ff974 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161b40>\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbmi.n\t2ff8fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161ac8>\n+\tbmi.n\t2ff90c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161ad8>\n \tmovs\tr0, r2\n-\tsubs\tr6, #46\t@ 0x2e\n+\tsubs\tr6, #54\t@ 0x36\n \tmovs\tr2, r2\n DataProcessing::minimumLeftClip_Read(Read&, std::__cxx11::basic_string, std::allocator > const&, bool, bool, bool):\n ./src/mira/dataprocessing.C:1871\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr0, [pc, #448]\t@ (2ffb78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161d44>)\n \tsub\tsp, #20\n@@ -1548434,19 +1548434,19 @@\n \tmovs\tr0, r0\n \tbpl.n\t2ffaac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161c78>\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbcc.n\t2ffaf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161cbc>\n+\tbcc.n\t2ffb00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161ccc>\n \tmovs\tr0, r2\n-\tbcc.n\t2ffad4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161ca0>\n+\tbcc.n\t2ffae4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161cb0>\n \tmovs\tr0, r2\n-\tbcc.n\t2ffac0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161c8c>\n+\tbcc.n\t2ffad0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161c9c>\n \tmovs\tr0, r2\n \tbmi.n\t2ffb08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161cd4>\n \tmovs\tr2, r3\n DataProcessing::minimumLeftClip_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&, bool, bool, bool):\n ./src/mira/dataprocessing.C:1858\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n@@ -1548771,21 +1548771,21 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbcs.n\t2ffd58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161f24>\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbeq.n\t2ffd88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161f54>\n+\tbeq.n\t2ffd98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161f64>\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tbeq.n\t2ffd68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161f34>\n+\tbeq.n\t2ffd78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161f44>\n \tmovs\tr0, r2\n-\tbeq.n\t2fff0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1620d8>\n+\tbeq.n\t2fff1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1620e8>\n \tmovs\tr0, r2\n \tbne.n\t2ffd58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x161f24>\n \tmovs\tr2, r3\n DataProcessing::minimumRightClip_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&, bool, bool, bool):\n ./src/mira/dataprocessing.C:1898\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n@@ -1549315,21 +1549315,21 @@\n \tmovs\tr0, r0\n \tbeq.n\t300290 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16245c>\n \tmovs\tr2, r3\n \tbeq.n\t300288 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x162454>\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldmia\tr4!, {r1, r3, r5, r7}\n+\tldmia\tr4, {r1, r4, r5, r7}\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldmia\tr4, {r1, r4, r7}\n+\tldmia\tr4, {r1, r3, r4, r7}\n \tmovs\tr0, r2\n-\tldmia\tr4!, {r1, r2, r3, r7}\n+\tldmia\tr4, {r1, r2, r4, r7}\n \tmovs\tr0, r2\n \tldmia\tr5, {r1, r4, r5, r6}\n \tmovs\tr2, r3\n DataProcessing::clipPolyATAtEnds_Read(Read&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:2032\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r2\n@@ -1549644,23 +1549644,23 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmia\tr4, {r3, r4, r6, r7}\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldmia\tr3!, {r4, r5}\n+\tldmia\tr3, {r3, r4, r5}\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldmia\tr3, {r1, r3, r4}\n+\tldmia\tr3!, {r1, r5}\n \tmovs\tr0, r2\n-\tldmia\tr2, {r2, r4, r5, r6}\n+\tldmia\tr2, {r2, r3, r4, r5, r6}\n \tmovs\tr0, r2\n-\tldmia\tr2, {r2, r3, r4, r6}\n+\tldmia\tr2, {r2, r5, r6}\n \tmovs\tr0, r2\n \tldmia\tr2!, {r1, r4, r5, r6, r7}\n \tmovs\tr2, r3\n DataProcessing::clipPolyATAtEnds_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:2014\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n@@ -1549778,15 +1549778,15 @@\n \tbl\t300254 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x162420>\n \tb.n\t300532 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1626fe>\n \tnop\n \tldmia\tr2!, {r3, r7}\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr1!, {r3, r6, r7}\n+\tldmia\tr1!, {r4, r6, r7}\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n DataProcessing::clipPolyBaseAtEnd_Read(Read&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:2310\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n@@ -1550252,25 +1550252,25 @@\n \tmovs\tr0, r0\n \tldmia\tr1!, {r2, r3, r7}\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tstmia\tr7!, {r5, r7}\n \tmovs\tr2, r3\n-\tstmia\tr7!, {r2, r3, r5}\n+\tstmia\tr7!, {r2, r4, r5}\n \tmovs\tr0, r2\n-\tstmia\tr7!, {r1, r2, r3, r4}\n+\tstmia\tr7!, {r1, r2, r5}\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r2}\n+\tstmia\tr6!, {r2, r3}\n \tmovs\tr0, r2\n-\tstmia\tr6!, {r1, r3}\n+\tstmia\tr6!, {r1, r4}\n \tmovs\tr0, r2\n-\tstmia\tr5!, {r2, r3, r4, r5, r6, r7}\n+\tstmia\tr6!, {r2}\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n DataProcessing::clipPolyBaseAtEnd_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:2291\n@@ -1550390,15 +1550390,15 @@\n \tbl\t3005b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x162780>\n \tb.n\t3009f6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x162bc2>\n \tnop\n \tstmia\tr5!, {r2, r6, r7}\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r2, r4, r6, r7}\n+\tstmia\tr5!, {r2, r3, r4, r6, r7}\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n DataProcessing::seqMatchPhiX174_Read(Read&, std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/dataprocessing.C:2488\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr9, r2\n@@ -1550633,33 +1550633,33 @@\n \tmovs\tr0, r0\n \tstmia\tr4!, {r1, r4, r6, r7}\n \tmovs\tr2, r3\n \tsubs\tr2, r5, r4\n \tmovs\tr4, r3\n \tstmia\tr4!, {r3, r5, r7}\n \tmovs\tr2, r3\n-\tadds\tr1, #96\t@ 0x60\n+\tadds\tr1, #104\t@ 0x68\n \tmovs\tr2, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r3, r4}\n+\tstmia\tr5!, {r5}\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tstmia\tr4!, {r1, r2, r4}\n \tmovs\tr2, r3\n-\tstmia\tr5!, {}\n+\tstmia\tr5!, {r3}\n \tmovs\tr0, r2\n \tstmia\tr3!, {r3, r5, r6, r7}\n \tmovs\tr2, r3\n-\tstmia\tr4!, {r1, r2, r3, r4, r5, r7}\n+\tstmia\tr4!, {r1, r2, r6, r7}\n \tmovs\tr0, r2\n-\tstmia\tr4!, {r1, r2, r3}\n+\tstmia\tr4!, {r1, r2, r4}\n \tmovs\tr0, r2\n-\tstmia\tr4!, {r4}\n+\tstmia\tr4!, {r3, r4}\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n DataProcessing::seqMatchRRNA_Read(Read&, std::__cxx11::basic_string, std::allocator > const&, unsigned int):\n ./src/mira/dataprocessing.C:2518\n@@ -1550877,29 +1550877,29 @@\n \tmovs\tr0, r0\n \tstmia\tr2!, {r2, r5, r6, r7}\n \tmovs\tr2, r3\n \tadds\tr4, r7, r4\n \tmovs\tr4, r3\n \tstmia\tr2!, {r2, r4, r5, r7}\n \tmovs\tr2, r3\n-\tcmp\tr7, #112\t@ 0x70\n+\tcmp\tr7, #120\t@ 0x78\n \tmovs\tr2, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r3, r4, r6, r7}\n+\tstmia\tr3!, {r1, r5, r6, r7}\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r1, r4}\n+\tstmia\tr3!, {r1, r3, r4}\n \tmovs\tr0, r2\n \tstmia\tr2!, {r2, r3, r4}\n \tmovs\tr2, r3\n-\tstmia\tr3!, {r1}\n+\tstmia\tr3!, {r1, r3}\n \tmovs\tr0, r2\n-\tstmia\tr2!, {r1, r2, r3, r4, r5, r6, r7}\n+\tstmia\tr3!, {r1, r2}\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n DataProcessing::~DataProcessing():\n ./src/mira/dataprocessing.C:93\n@@ -1553231,31 +1553231,31 @@\n \tcmp\tr0, #0\n \tbeq.w\t301e0a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x163fd6>\n \tbl\t997cc , std::allocator >, std::allocator, std::allocator > > >::_M_clear()@@Base+0x65a94>\n \tb.n\t301e0a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x163fd6>\n \tnop\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb6da\n+\t\t\t@ instruction: 0xb6e2\n \tmovs\tr0, r2\n-\t\t\t@ instruction: 0xb668\n+\tcpsid\t\n \tmovs\tr0, r2\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tcbz\tr2, 301fac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x164178>\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcbz\tr6, 301fce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16419a>\n+\tcbz\tr6, 301fd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16419c>\n \tmovs\tr0, r2\n-\tcbz\tr6, 301fd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1641a0>\n+\tcbz\tr6, 301fd6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1641a2>\n \tmovs\tr0, r2\n-\tcbz\tr2, 301fd2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16419e>\n+\tcbz\tr2, 301fd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1641a0>\n \tmovs\tr0, r2\n \tands\tr0, r2\n \tmovs\tr6, r1\n DataProcessing::priv_EnsureAdapRegexes(ReadGroupLib::ReadGroupID):\n ./src/mira/dataprocessing.C:673\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -1553427,17 +1553427,17 @@\n \tadd.w\tr2, ip, #332\t@ 0x14c\n \tb.w\t301250 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16341c>\n \tnop\n \tadd\tr7, sp, #848\t@ 0x350\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tcbnz\tr6, 30214e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16431a>\n+\tcbnz\tr6, 302150 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16431c>\n \tmovs\tr0, r2\n-\tcbnz\tr0, 30214c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x164318>\n+\tcbnz\tr0, 30214e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16431a>\n \tmovs\tr0, r2\n DataProcessing::performRareKMERMasking_Read(Read&, unsigned int, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:1027\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n \tldr.w\tr6, [pc, #1444]\t@ 3026a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16486c>\n \tsub\tsp, #268\t@ 0x10c\n@@ -1554197,29 +1554197,29 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr5, sp, #24\n \tmovs\tr2, r3\n \tadd\tr4, sp, #920\t@ 0x398\n \tmovs\tr2, r3\n-\tcmp\tr0, #146\t@ 0x92\n+\tcmp\tr0, #154\t@ 0x9a\n \tmovs\tr0, r2\n-\tldr\tr2, [r7, #52]\t@ 0x34\n+\tldr\tr2, [r0, #56]\t@ 0x38\n \tmovs\tr0, r2\n-\tadd\tr6, sp, #752\t@ 0x2f0\n+\tadd\tr6, sp, #784\t@ 0x310\n \tmovs\tr0, r2\n \tadd\tr2, sp, #216\t@ 0xd8\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #408\t@ 0x198\n+\tadd\tr3, sp, #440\t@ 0x1b8\n \tmovs\tr0, r2\n-\tadd\tr3, sp, #384\t@ 0x180\n+\tadd\tr3, sp, #416\t@ 0x1a0\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n DataProcessing::performRareKMERMasking_Pool(ReadPool&, unsigned int, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:990\n@@ -1554496,19 +1554496,19 @@\n \tmovne\tr2, r9\n ./src/mira/dataprocessing.C:994\n \tb.n\t302734 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x164900>\n \tadd\tr0, sp, #472\t@ 0x1d8\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #64\t@ 0x40\n+\tadd\tr2, sp, #96\t@ 0x60\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf232000e\n+\t\t\t@ instruction: 0xf23e000e\n DataProcessing::priv_constructorSkimPool(ReadGroupLib::ReadGroupID, std::vector >&, unsigned int, char const*):\n ./src/mira/dataprocessing.C:781\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #2876]\t@ 303458 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165624>\n \tldr.w\tr4, [pc, #2876]\t@ 30345c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165628>\n \tadd\tr5, pc\n \tvpush\t{d8-d10}\n@@ -1556036,15 +1556036,15 @@\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tmrrc2\t0, 1, r0, sl, cr11\n \tadd\tr5, pc, #720\t@ (adr r5, 303740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16590c>)\n \tmovs\tr2, r3\n \tstc2\t0, cr0, [r2], {27}\n-\tadd\tr7, pc, #736\t@ (adr r7, 303758 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165924>)\n+\tadd\tr7, pc, #768\t@ (adr r7, 303778 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165944>)\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #11\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n@@ -1556052,31 +1556052,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #26\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #448]\t@ 0x1c0\n+\tldr\tr7, [sp, #480]\t@ 0x1e0\n \tmovs\tr0, r2\n-\tadd\tr0, pc, #688\t@ (adr r0, 30374c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165918>)\n+\tadd\tr0, pc, #720\t@ (adr r0, 30376c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165938>)\n \tmovs\tr0, r2\n-\tadd\tr0, pc, #632\t@ (adr r0, 303718 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1658e4>)\n+\tadd\tr0, pc, #664\t@ (adr r0, 303738 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165904>)\n \tmovs\tr0, r2\n-\tadd\tr0, pc, #528\t@ (adr r0, 3036b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165880>)\n+\tadd\tr0, pc, #560\t@ (adr r0, 3036d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1658a0>)\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbvs.n\t303430 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1655fc>\n+\tbvs.n\t303448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165614>\n \tmovs\tr6, r1\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tldrsb\tr0, [r0, r7]\n+\tldrsb\tr4, [r1, r7]\n \tmovs\tr6, r1\n \t\t\t@ instruction: 0xf22c001b\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n DataProcessing::priv_EnsureAdapSkims(ReadGroupLib::ReadGroupID):\n /usr/include/c++/10/bits/stl_vector.h:919\n \tldr\tr3, [pc, #220]\t@ (3035a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16576c>)\n@@ -1556185,21 +1556185,21 @@\n \tnop\n \t\t\t@ instruction: 0xf0fc001b\n \tldr\tr2, [sp, #544]\t@ 0x220\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \torns\tr0, lr, #27\n-\tadd\tr6, pc, #936\t@ (adr r6, 30395c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165b28>)\n+\tadd\tr6, pc, #968\t@ (adr r6, 30397c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165b48>)\n \tmovs\tr0, r2\n \torn\tr0, r0, #27\n-\tstmia\tr0!, {r3, r5, r6}\n+\tstmia\tr0!, {r4, r5, r6}\n \tmovs\tr0, r2\n \torr.w\tr0, r0, #27\n-\tadd\tr6, pc, #696\t@ (adr r6, 30387c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165a48>)\n+\tadd\tr6, pc, #728\t@ (adr r6, 30389c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165a68>)\n \tmovs\tr0, r2\n DataProcessing::priv_EnsurePhiX174Statistics():\n ./src/mira/dataprocessing.C:875\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/dataprocessing.C:876\n \tldr\tr6, [pc, #988]\t@ (3039a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165b74>)\n ./src/mira/dataprocessing.C:875\n@@ -1556753,36 +1556753,36 @@\n \tmovs\tr0, r0\n \tldr\tr1, [sp, #528]\t@ 0x210\n \tmovs\tr2, r3\n \tldr\tr1, [sp, #456]\t@ 0x1c8\n \tmovs\tr2, r3\n \tldr\tr1, [sp, #232]\t@ 0xe8\n \tmovs\tr2, r3\n-\tadd\tr2, sp, #392\t@ 0x188\n+\tadd\tr2, sp, #424\t@ 0x1a8\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #11\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #26\n \tmovs\tr0, r0\n \tmrc\t0, 1, r0, cr14, cr11, {0}\n-\tldr\tr2, [sp, #88]\t@ 0x58\n+\tldr\tr2, [sp, #120]\t@ 0x78\n \tmovs\tr0, r2\n \tstcl\t0, cr0, [lr], #108\t@ 0x6c\n \tldcl\t0, cr0, [r0], {27}\n-\tstr\tr6, [r5, r7]\n+\tstr\tr2, [r7, r7]\n \tmovs\tr6, r1\n-\tbeq.n\t303984 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165b50>\n+\tbeq.n\t30399c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165b68>\n \tmovs\tr6, r1\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n \tmcrr\t0, 1, r0, r6, cr11\n DataProcessing::stdTreatmentPool_MultiThread(std::vector >&, DataProcessing&, std::vector >, std::allocator > > >&, ReadPool&, std::vector >*, std::__cxx11::basic_string, std::allocator >&, bool, int, int):\n@@ -1557197,21 +1557197,21 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr5, [sp, #160]\t@ 0xa0\n \tmovs\tr2, r3\n \tadds\tr1, #237\t@ 0xed\n \tmovs\tr0, r0\n-\tldmia\tr2, {r1, r2, r4, r6, r7}\n+\tldmia\tr2!, {r1, r5, r6, r7}\n \tmovs\tr6, r1\n-\tsubs\tr3, #216\t@ 0xd8\n+\tsubs\tr3, #228\t@ 0xe4\n \tmovs\tr6, r1\n-\tldmia\tr2, {r1, r2, r3, r5, r6, r7}\n+\tldmia\tr2!, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr6, r1\n-\tbcc.n\t303c00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165dcc>\n+\tbcc.n\t303c18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x165de4>\n \tmovs\tr6, r1\n \tasrs\tr4, r6, #32\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #23\n \tmovs\tr0, r0\n /usr/include/boost/thread/lock_types.hpp:329\n \tldrb\tr3, [r7, #4]\n@@ -1557992,25 +1557992,25 @@\n \teors\tr1, r3\n \tlsrs\tr0, r6, #13\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #20\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #21\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r4, r7}\n+\tstmia\tr5!, {r3, r4, r7}\n \tmovs\tr7, r1\n-\tldrb\tr6, [r6, #1]\n+\tldrb\tr6, [r7, #1]\n \tmovs\tr0, r2\n-\tadd\tr7, sp, #1000\t@ 0x3e8\n+\tadd\tsp, #24\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #24\n+\tadd\tr5, sp, #72\t@ 0x48\n \tmovs\tr6, r1\n /usr/include/boost/smart_ptr/detail/shared_count.hpp:596\n \tldr\tr0, [r4, #8]\n /usr/include/boost/smart_ptr/weak_ptr.hpp:187\n \tstr\tr4, [r4, #4]\n /usr/include/boost/smart_ptr/detail/shared_count.hpp:596\n \tcmp\tr0, #0\n@@ -1559503,138 +1559503,138 @@\n \tb.n\t304d70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x166f3c>\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n \tldrh\tr0, [r0, #28]\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb.w\tr0, [ip, r1, lsl #1]\n-\tldrh\tr2, [r5, #58]\t@ 0x3a\n+\tstrh.w\tr0, [r4, r1, lsl #1]\n+\tldrh\tr2, [r6, #58]\t@ 0x3a\n \tmovs\tr0, r2\n-\tldrh\tr0, [r3, #32]\n+\tldrh\tr0, [r4, #32]\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldrh\tr6, [r4, #32]\n+\tldrh\tr6, [r5, #32]\n \tmovs\tr0, r2\n-\tldrh\tr0, [r1, #32]\n+\tldrh\tr0, [r2, #32]\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr6, [r3, #34]\t@ 0x22\n+\tldrh\tr6, [r4, #34]\t@ 0x22\n \tmovs\tr0, r2\n-\tldrh\tr0, [r4, #28]\n+\tldrh\tr0, [r5, #28]\n \tmovs\tr0, r2\n-\tldrh\tr0, [r1, #32]\n+\tldrh\tr0, [r2, #32]\n \tmovs\tr0, r2\n-\tldrh\tr2, [r7, #24]\n+\tldrh\tr2, [r0, #26]\n \tmovs\tr0, r2\n-\tstmia\tr1!, {r1, r2, r5, r6}\n+\tstmia\tr1!, {r1, r4, r5, r6}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r5, r7}\n+\tstmia\tr1!, {r2, r3, r5, r7}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r1, r2, r3, r5, r6, r7}\n+\tstmia\tr1!, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr6, r1\n-\tstmia\tr6!, {r1, r2, r3, r6}\n+\tstmia\tr6!, {r1, r3, r4, r6}\n \tmovs\tr6, r1\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r2, r6, r7}\n-\tmovs\tr6, r1\n-\tstmia\tr2!, {r1, r3, r4}\n+\tstmia\tr1!, {r4, r6, r7}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r3}\n+\tstmia\tr2!, {r1, r2, r5}\n \tmovs\tr6, r1\n \tstmia\tr1!, {r2, r4}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r1, r2, r3, r6}\n+\tstmia\tr1!, {r5}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r2, r3, r7}\n+\tstmia\tr1!, {r1, r3, r4, r6}\n \tmovs\tr6, r1\n-\tstmia\tr0!, {r2, r3, r4, r5, r6, r7}\n+\tstmia\tr1!, {r3, r4, r7}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r1, r2, r4, r5}\n+\tstmia\tr1!, {r3}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r3, r5, r6}\n+\tstmia\tr1!, {r1, r6}\n+\tmovs\tr6, r1\n+\tstmia\tr1!, {r2, r4, r5, r6}\n \tmovs\tr6, r1\n-\tstmia\tr0!, {r1}\n+\tstmia\tr0!, {r1, r2, r3}\n \tmovs\tr6, r1\n-\tbmi.n\t304db0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x166f7c>\n+\tbmi.n\t304dc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x166f94>\n \tmovs\tr6, r1\n \tlsls\tr4, r2, #27\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r7}\n+\tstmia\tr5!, {r2, r3, r7}\n \tmovs\tr6, r1\n-\tstmia\tr2!, {r1, r3, r4, r5, r6}\n+\tstmia\tr2!, {r1, r2, r7}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r2, r3, r4, r6, r7}\n+\tstmia\tr1!, {r3, r5, r6, r7}\n \tmovs\tr6, r1\n-\tstmia\tr2!, {r1, r2, r5, r7}\n+\tstmia\tr2!, {r1, r4, r5, r7}\n \tmovs\tr6, r1\n-\tstmia\tr2!, {r1, r2, r5}\n+\tstmia\tr2!, {r1, r4, r5}\n \tmovs\tr6, r1\n-\tstmia\tr1!, {r2, r4, r6}\n+\tstmia\tr1!, {r5, r6}\n \tmovs\tr6, r1\n-\tadd\tr3, sp, #1016\t@ 0x3f8\n+\tadd\tr4, sp, #40\t@ 0x28\n \tmovs\tr6, r1\n-\tadd\tr3, sp, #680\t@ 0x2a8\n+\tadd\tr3, sp, #728\t@ 0x2d8\n \tmovs\tr6, r1\n-\tit\t\n-\tmov\tr6, r1\n-\tadd\tr3, sp, #920\t@ 0x398\n+\tstmia\tr0!, {r2}\n \tmovs\tr6, r1\n-\titet\tpl\n-\tmovpl\tr6, r1\n-\taddmi\tr3, sp, #472\t@ 0x1d8\n-\tmovpl\tr6, r1\n-\titt\tgt\n-\tmovgt\tr6, r1\n-\taddgt\tr3, sp, #712\t@ 0x2c8\n+\tadd\tr3, sp, #968\t@ 0x3c8\n \tmovs\tr6, r1\n-\titt\tcs\n-\tmovcs\tr6, r1\n-\titte\teq\t@ unpredictable \n-\tmoveq\tr6, r1\n-\tldreq\tr1, [pc, #128]\t@ (304f44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167110>)\n+\tittt\tvs\n+\tmovvs\tr6, r1\n+\taddvs\tr3, sp, #520\t@ 0x208\n+\tmovvs\tr6, r1\n+\tnop\t{13}\n+\tmovs\tr6, r1\n+\tadd\tr3, sp, #760\t@ 0x2f8\n+\tmovs\tr6, r1\n+\twfi\n+\tmovs\tr6, r1\n+\titee\tne\n \tmovne\tr6, r1\n-\tcmp\tr4, #134\t@ 0x86\n+\tldreq\tr1, [pc, #176]\t@ (304f74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167140>)\n+\tmoveq\tr6, r1\n+\tcmp\tr4, #146\t@ 0x92\n \tmovs\tr6, r1\n-\tcmp\tr4, #156\t@ 0x9c\n+\tcmp\tr4, #168\t@ 0xa8\n \tmovs\tr6, r1\n-\tcmp\tr4, #198\t@ 0xc6\n+\tcmp\tr4, #210\t@ 0xd2\n \tmovs\tr6, r1\n-\tcbnz\tr0, 304f46 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167112>\n+\tcbnz\tr4, 304f48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167114>\n \tmovs\tr6, r1\n-\tcbnz\tr2, 304f56 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167122>\n+\tpop\t{r1, r2}\n \tmovs\tr6, r1\n-\tpop\t{r3, r5, r6}\n+\tpop\t{r2, r4, r5, r6}\n \tmovs\tr6, r1\n-\tbkpt\t0x00a6\n+\tbkpt\t0x00b2\n \tmovs\tr6, r1\n-\tstmia\tr4!, {r3, r6}\n+\tstmia\tr4!, {r2, r4, r6}\n \tmovs\tr6, r1\n-\tldr\tr0, [pc, #648]\t@ (305170 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16733c>)\n+\tldr\tr0, [pc, #696]\t@ (3051a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16736c>)\n \tmovs\tr6, r1\n-\tstmia\tr0!, {r5, r6}\n+\tstmia\tr0!, {r2, r3, r5, r6}\n \tmovs\tr6, r1\n-\tstmia\tr0!, {r1, r2, r3, r7}\n+\tstmia\tr0!, {r1, r3, r4, r7}\n \tmovs\tr6, r1\n-\tstmia\tr0!, {r3, r6, r7}\n+\tstmia\tr0!, {r2, r4, r6, r7}\n \tmovs\tr6, r1\n-\tcbnz\tr6, 304f48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167114>\n+\tcbnz\tr2, 304f4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167118>\n \tmovs\tr6, r1\n-\tcbnz\tr0, 304f5a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167126>\n+\tcbnz\tr4, 304f5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167128>\n \tmovs\tr6, r1\n-\tcbnz\tr6, 304f6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167138>\n+\tcbnz\tr2, 304f70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16713c>\n \tmovs\tr6, r1\n-\tstmia\tr4!, {r4, r5}\n+\tstmia\tr4!, {r2, r3, r4, r5}\n \tmovs\tr6, r1\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n DataProcessing::buntifyReadsByHashFreq_Read(Read&, unsigned int):\n ./src/mira/dataprocessing.C:1187\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n@@ -1560385,19 +1560385,19 @@\n \tmovs\tr0, r0\n \tldrb\tr0, [r2, #31]\n \tmovs\tr2, r3\n \tbpl.n\t3054c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167690>\n \tmovs\tr3, r3\n \tbcs.n\t3055a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167770>\n \tmovs\tr3, r3\n-\tldrh\tr6, [r0, #14]\n+\tldrh\tr6, [r1, #14]\n \tmovs\tr7, r1\n-\tldrh\tr2, [r7, #12]\n+\tldrh\tr2, [r0, #14]\n \tmovs\tr7, r1\n-\tstr\tr6, [r4, #40]\t@ 0x28\n+\tstr\tr6, [r5, #40]\t@ 0x28\n \tmovs\tr7, r1\n \tbne.n\t305448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167614>\n \tmovs\tr3, r3\n \tbne.n\t305434 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167600>\n \tmovs\tr3, r3\n \tbne.n\t30552c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1676f8>\n \tmovs\tr3, r3\n@@ -1560509,21 +1560509,21 @@\n \tb.n\t30557a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167746>\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tldrb\tr2, [r4, #9]\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr2, [r5, #26]\n+\tldrb\tr2, [r6, #26]\n \tmovs\tr0, r2\n-\tstr\tr7, [sp, #520]\t@ 0x208\n+\tstr\tr7, [sp, #552]\t@ 0x228\n \tmovs\tr7, r1\n-\tldr\tr0, [pc, #176]\t@ (30567c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167848>)\n+\tldr\tr0, [pc, #224]\t@ (3056ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x167878>)\n \tmovs\tr6, r1\n-\tldrb\tr6, [r6, #24]\n+\tldrb\tr6, [r7, #24]\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n DataProcessing::performKMERRepeatTagging_Read(Read&, unsigned int):\n ./src/mira/dataprocessing.C:1402\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r1\n@@ -1560906,19 +1560906,19 @@\n \tmovs\tr3, r3\n \tlsls\tr0, r7, #22\n \tmovs\tr0, r0\n \tldmia\tr7!, {r3, r4, r5, r6}\n \tmovs\tr3, r3\n \tldmia\tr6!, {r2, r3, r4, r5}\n \tmovs\tr3, r3\n-\tstrh\tr0, [r3, #46]\t@ 0x2e\n+\tstrh\tr0, [r4, #46]\t@ 0x2e\n \tmovs\tr7, r1\n-\tldrb\tr6, [r6, #15]\n+\tldrb\tr6, [r7, #15]\n \tmovs\tr0, r2\n-\tldrsh\tr4, [r6, r2]\n+\tldrsh\tr4, [r7, r2]\n \tmovs\tr7, r1\n \tldmia\tr5, {r2, r3, r4, r5, r7}\n \tmovs\tr3, r3\n \tldmia\tr5, {r1, r2, r3, r5, r7}\n \tmovs\tr3, r3\n \tldmia\tr5, {r3, r4, r5}\n \tmovs\tr3, r3\n@@ -1561031,23 +1561031,23 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tstrb\tr2, [r7, #25]\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr2, [r7, #11]\n+\tldrb\tr2, [r0, #12]\n \tmovs\tr0, r2\n-\tstr\tr3, [sp, #616]\t@ 0x268\n+\tstr\tr3, [sp, #648]\t@ 0x288\n \tmovs\tr7, r1\n-\tadd\tr4, r8\n+\tadd\tr0, sl\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrb\tr6, [r5, #8]\n+\tldrb\tr6, [r6, #8]\n \tmovs\tr0, r2\n DataProcessing::addKMerForkTags_Pool(ReadPool&, unsigned int):\n ./src/mira/dataprocessing.C:1297\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr6, [pc, #1400]\t@ 305f40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16810c>\n \tldr.w\tr5, [pc, #1400]\t@ 305f44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x168110>\n@@ -1561759,51 +1561759,51 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr4, [r7, #21]\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr4, [r1, #8]\n+\tldrb\tr4, [r2, #8]\n \tmovs\tr0, r2\n \tldmia\tr3!, {r1, r5, r7}\n \tmovs\tr3, r3\n-\tstr\tr2, [sp, #544]\t@ 0x220\n+\tstr\tr2, [sp, #576]\t@ 0x240\n \tmovs\tr7, r1\n \tlsrs\tr0, r7, #27\n \tmovs\tr0, r0\n \tldmia\tr3, {r3, r4, r5, r6}\n \tmovs\tr3, r3\n \tldmia\tr3!, {r5, r6}\n \tmovs\tr3, r3\n \tldmia\tr3, {r3, r4, r5}\n \tmovs\tr3, r3\n-\tsubs\tr7, #252\t@ 0xfc\n+\tands\tr0, r1\n \tmovs\tr6, r1\n \tstrb\tr0, [r1, #7]\n \tmovs\tr2, r3\n-\tldrb\tr0, [r3, #31]\n+\tldrb\tr0, [r4, #31]\n \tmovs\tr7, r1\n-\tldrb\tr6, [r1, #31]\n+\tldrb\tr6, [r2, #31]\n \tmovs\tr7, r1\n-\tldr\tr4, [r7, r2]\n+\tldr\tr4, [r0, r3]\n \tmovs\tr7, r1\n \tstmia\tr7!, {r1, r2, r6, r7}\n \tmovs\tr3, r3\n \tstmia\tr7!, {r4, r5, r7}\n \tmovs\tr3, r3\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tstmia\tr7!, {r1, r7}\n \tmovs\tr3, r3\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tstmia\tr7!, {r2, r3, r4, r6}\n \tmovs\tr3, r3\n-\tstrb\tr0, [r0, #20]\n+\tstrb\tr0, [r1, #20]\n \tmovs\tr0, r2\n \tstmia\tr6!, {r1, r4, r5, r7}\n \tmovs\tr3, r3\n DataProcessing::adaptorRightClip_Read(Read&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:2411\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r1\n@@ -1562514,51 +1562514,51 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r3, #120]\t@ 0x78\n \tmovs\tr2, r3\n \tstmia\tr5!, {r2, r4, r6, r7}\n \tmovs\tr3, r3\n-\tblt.n\t3064c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x168690>\n+\tbgt.n\t3064d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1686a0>\n \tmovs\tr1, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrb\tr2, [r6, #16]\n+\tstrb\tr2, [r7, #16]\n \tmovs\tr0, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstrb\tr6, [r2, #15]\n+\tstrb\tr6, [r3, #15]\n \tmovs\tr0, r2\n-\tldc2\t0, cr0, [r0], #64\t@ 0x40\n-\tmovs\tr5, #24\n+\tldc2\t0, cr0, [r8], #64\t@ 0x40\n+\tmovs\tr5, #32\n \tmovs\tr7, r1\n \tldr\tr2, [r6, #100]\t@ 0x64\n \tmovs\tr2, r3\n-\tbls.n\t306414 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1685e0>\n+\tbls.n\t306424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1685f0>\n \tmovs\tr1, r2\n-\tstrb\tr6, [r7, #6]\n+\tstrb\tr6, [r0, #7]\n \tmovs\tr0, r2\n-\tstrb\tr6, [r7, #5]\n+\tstrb\tr6, [r0, #6]\n \tmovs\tr0, r2\n-\t\t\t@ instruction: 0xfa5a0010\n-\tmovs\tr2, #166\t@ 0xa6\n+\t\t\t@ instruction: 0xfa620010\n+\tmovs\tr2, #174\t@ 0xae\n \tmovs\tr7, r1\n-\tldr\tr0, [r4, #72]\t@ 0x48\n+\tldr\tr0, [r5, #72]\t@ 0x48\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr2, [r1, #3]\n+\tstrb\tr2, [r2, #3]\n \tmovs\tr0, r2\n-\tldr\tr6, [r2, #112]\t@ 0x70\n+\tldr\tr6, [r3, #112]\t@ 0x70\n \tmovs\tr0, r2\n \tldr\tr0, [r1, #56]\t@ 0x38\n \tmovs\tr2, r3\n-\tstrb\tr2, [r2, #0]\n+\tstrb\tr2, [r3, #0]\n \tmovs\tr0, r2\n-\tldr\tr6, [r5, #124]\t@ 0x7c\n+\tldr\tr6, [r6, #124]\t@ 0x7c\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n DataProcessing::adaptorRightClip_Pool(ReadPool&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:2395\n@@ -1562652,15 +1562652,15 @@\n \tbl\t305fa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16816c>\n \tb.n\t306586 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x168752>\n \tnop\n \tldr\tr4, [r6, #32]\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [r2, #120]\t@ 0x78\n+\tldr\tr4, [r3, #120]\t@ 0x78\n \tmovs\tr0, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n DataProcessing::stdTreatmentPool_SingleThread(std::vector >&, DataProcessing&, ReadPool&, std::vector >*, std::__cxx11::basic_string, std::allocator >&, bool, int, int):\n ./src/mira/dataprocessing.C:2544\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r2\n@@ -1563093,29 +1563093,29 @@\n \teors\tr1, r3\n \tldr\tr2, [r0, #24]\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r6, #20]\n \tmovs\tr2, r3\n-\tldr\tr6, [sp, #608]\t@ 0x260\n+\tldr\tr6, [sp, #640]\t@ 0x280\n \tmovs\tr7, r1\n-\tstr\tr2, [r0, r6]\n+\tstr\tr2, [r1, r6]\n \tmovs\tr0, r2\n-\tldrh\tr0, [r1, #8]\n+\tldrh\tr4, [r2, #8]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tldr\tr4, [r0, #0]\n \tmovs\tr2, r3\n \tstr\tr4, [r3, #124]\t@ 0x7c\n \tmovs\tr2, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrh\tr0, [r3, #48]\t@ 0x30\n+\tstrh\tr4, [r4, #48]\t@ 0x30\n \tmovs\tr6, r1\n ./src/mira/dataprocessing.C:2555 (discriminator 1)\n \tmovs\tr0, #40\t@ 0x28\n \tasrs\tr4, r5, #31\n \tblx\tb6b8 \n \tldr\tr2, [sp, #12]\n \tmov\tr7, r0\n@@ -1563508,25 +1563508,25 @@\n \tblx\tb538 \n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tb.n\t306caa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x168e76>\n \tb.n\t306cc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x168e90>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t306c9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x168e68>\n \tb.n\t306ca4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x168e70>\n-\tstr\tr4, [r2, #120]\t@ 0x78\n+\tstr\tr4, [r3, #120]\t@ 0x78\n \tmovs\tr0, r2\n-\tldr\tr6, [r3, #12]\n+\tldr\tr6, [r4, #12]\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr0, [r0, #116]\t@ 0x74\n+\tstr\tr0, [r1, #116]\t@ 0x74\n \tmovs\tr0, r2\n-\tldr\tr2, [r7, #4]\n+\tldr\tr2, [r0, #8]\n \tmovs\tr0, r2\n DataProcessing::priv_stdTreatmentThread(unsigned int, DataProcessing::threadsharecontrol_t*, std::vector >*, DataProcessing*, ReadPool*, std::vector >*, std::__cxx11::basic_string, std::allocator >*):\n ./src/mira/dataprocessing.C:2731\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r2\n \tldr\tr2, [pc, #420]\t@ (306e9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x169068>)\n \tmov\tr8, r3\n@@ -1563757,35 +1563757,35 @@\n \tnop\n \tstr\tr4, [r4, #36]\t@ 0x24\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [r1, #36]\t@ 0x24\n \tmovs\tr2, r3\n-\tldr\tr1, [sp, #136]\t@ 0x88\n+\tldr\tr1, [sp, #184]\t@ 0xb8\n \tmovs\tr6, r1\n-\tlsrs\tr4, r4, #8\n+\tlsrs\tr0, r6, #8\n \tmovs\tr6, r1\n-\tldr\tr1, [sp, #232]\t@ 0xe8\n+\tldr\tr1, [sp, #280]\t@ 0x118\n \tmovs\tr6, r1\n \tstr\tr0, [r7, #24]\n \tmovs\tr2, r3\n-\tadd\tr1, pc, #896\t@ (adr r1, 30723c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x169408>)\n+\tadd\tr1, pc, #944\t@ (adr r1, 30726c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x169438>)\n \tmovs\tr6, r1\n \tlsrs\tr0, r6, #17\n \tmovs\tr0, r0\n \tlsls\tr4, r6, #29\n \tmovs\tr0, r0\n-\tstr\tr2, [r2, #120]\t@ 0x78\n+\tstr\tr2, [r3, #120]\t@ 0x78\n \tmovs\tr0, r2\n \tstr\tr2, [r6, #16]\n \tmovs\tr2, r3\n-\tldr\tr3, [sp, #648]\t@ 0x288\n+\tldr\tr3, [sp, #696]\t@ 0x2b8\n \tmovs\tr6, r1\n-\tldr\tr3, [sp, #528]\t@ 0x210\n+\tldr\tr3, [sp, #576]\t@ 0x240\n \tmovs\tr6, r1\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::find_restart_lit():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:1005\n \tmovs\tr0, #0\n \tbx\tlr\n boost::detail::sp_counted_impl_p >*, DataProcessing*, ReadPool*, std::vector >*, std::__cxx11::basic_string, std::allocator >*), boost::_bi::list7, boost::_bi::value, boost::_bi::value >*>, boost::_bi::value, boost::_bi::value, boost::_bi::value >*>, boost::_bi::value, std::allocator >*> > > > >::~sp_counted_impl_p():\n /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:64\n@@ -1564204,17 +1564204,17 @@\n \tmovs\tr0, r0\n \tldrsh\tr6, [r6, r1]\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tldrsh\tr6, [r2, r0]\n \tmovs\tr2, r3\n-\tstr\tr4, [r6, #92]\t@ 0x5c\n+\tstr\tr4, [r7, #92]\t@ 0x5c\n \tmovs\tr0, r2\n-\tstr\tr2, [r1, #92]\t@ 0x5c\n+\tstr\tr2, [r2, #92]\t@ 0x5c\n \tmovs\tr0, r2\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n unsigned int DataProcessing::performSDBGChimeraSearch_Pool(ReadPool&, HashStatistics&, unsigned int, std::vector >*, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:356\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -1564698,41 +1564698,41 @@\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r4, r5]\n \tmovs\tr2, r3\n \tldrb\tr2, [r1, r5]\n \tmovs\tr2, r3\n-\tstr\tr2, [sp, #512]\t@ 0x200\n+\tstr\tr2, [sp, #544]\t@ 0x220\n \tmovs\tr7, r1\n-\tcmp\tr2, sp\n+\tcmp\tr2, lr\n \tmovs\tr0, r2\n-\tldrb\tr0, [r6, #19]\n+\tldrb\tr4, [r7, #19]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr0, [r2, #17]\n+\tldrb\tr4, [r3, #17]\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldrh\tr0, [r5, r6]\n \tmovs\tr2, r3\n-\tmovs\tr1, #24\n+\tmovs\tr1, #36\t@ 0x24\n \tmovs\tr6, r1\n-\tmovs\tr1, #20\n+\tmovs\tr1, #32\n \tmovs\tr6, r1\n-\tadds\tr7, #84\t@ 0x54\n+\tadds\tr7, #92\t@ 0x5c\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr2, [r3, #40]\t@ 0x28\n+\tstr\tr2, [r4, #40]\t@ 0x28\n \tmovs\tr0, r2\n \tlsrs\tr0, r1, #32\n \tmovs\tr0, r0\n bool DataProcessing::performSDBGChimeraSearch_Read >(Read&, HashStatistics >&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:396\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr6, r2\n@@ -1564861,17 +1564861,17 @@\n \tmovs\tr0, r0\n \tldr\tr6, [r6, r5]\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tldr\tr6, [r2, r4]\n \tmovs\tr2, r3\n-\tstr\tr4, [r6, #12]\n+\tstr\tr4, [r7, #12]\n \tmovs\tr0, r2\n-\tstr\tr2, [r1, #12]\n+\tstr\tr2, [r2, #12]\n \tmovs\tr0, r2\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n unsigned int DataProcessing::performSDBGChimeraSearch_Pool >(ReadPool&, HashStatistics >&, unsigned int, std::vector >*, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:356\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -1565355,41 +1565355,41 @@\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r4, r1]\n \tmovs\tr2, r3\n \tldr\tr2, [r1, r1]\n \tmovs\tr2, r3\n-\tldrh\tr0, [r0, #44]\t@ 0x2c\n+\tldrh\tr0, [r1, #44]\t@ 0x2c\n \tmovs\tr7, r1\n-\teors\tr2, r5\n+\teors\tr2, r6\n \tmovs\tr0, r2\n-\tstrb\tr0, [r6, #31]\n+\tstrb\tr4, [r7, #31]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r2, #29]\n+\tstrb\tr4, [r3, #29]\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldrsb\tr0, [r5, r2]\n \tmovs\tr2, r3\n-\tadds\tr0, r3, #0\n+\tadds\tr4, r4, #0\n \tmovs\tr6, r1\n-\tadds\tr4, r2, #0\n+\tadds\tr0, r4, #0\n \tmovs\tr6, r1\n-\tadds\tr2, #84\t@ 0x54\n+\tadds\tr2, #92\t@ 0x5c\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr2, [r3, r6]\n+\tldrb\tr2, [r4, r6]\n \tmovs\tr0, r2\n \tlsls\tr4, r5, #24\n \tmovs\tr0, r0\n bool DataProcessing::performSDBGChimeraSearch_Read >(Read&, HashStatistics >&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:396\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr6, r2\n@@ -1565518,17 +1565518,17 @@\n \tmovs\tr0, r0\n \tstrb\tr6, [r6, r1]\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tstrb\tr6, [r2, r0]\n \tmovs\tr2, r3\n-\tldrh\tr4, [r6, r7]\n+\tldrh\tr4, [r7, r7]\n \tmovs\tr0, r2\n-\tldrh\tr2, [r1, r7]\n+\tldrh\tr2, [r2, r7]\n \tmovs\tr0, r2\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n unsigned int DataProcessing::performSDBGChimeraSearch_Pool >(ReadPool&, HashStatistics >&, unsigned int, std::vector >*, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:356\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -1566012,41 +1566012,41 @@\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr2, [r4, r5]\n \tmovs\tr2, r3\n \tstrh\tr2, [r1, r5]\n \tmovs\tr2, r3\n-\tldrh\tr0, [r0, #4]\n+\tldrh\tr0, [r1, #4]\n \tmovs\tr7, r1\n-\tsubs\tr3, #106\t@ 0x6a\n+\tsubs\tr3, #114\t@ 0x72\n \tmovs\tr0, r2\n-\tstrb\tr0, [r6, #11]\n+\tstrb\tr4, [r7, #11]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r2, #9]\n+\tstrb\tr4, [r3, #9]\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tstr\tr0, [r5, r6]\n \tmovs\tr2, r3\n-\tasrs\tr0, r3, #28\n+\tasrs\tr4, r4, #28\n \tmovs\tr6, r1\n-\tasrs\tr4, r2, #28\n+\tasrs\tr0, r4, #28\n \tmovs\tr6, r1\n-\tcmp\tr5, #84\t@ 0x54\n+\tcmp\tr5, #92\t@ 0x5c\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr2, [r3, r2]\n+\tldr\tr2, [r4, r2]\n \tmovs\tr0, r2\n \tlsrs\tr0, r6, #6\n \tmovs\tr0, r0\n bool DataProcessing::performSDBGChimeraSearch_Read >(Read&, HashStatistics >&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:396\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr6, r2\n@@ -1566175,17 +1566175,17 @@\n \tmovs\tr0, r0\n \tldr\tr7, [pc, #472]\t@ (3082ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16a478>)\n \tmovs\tr2, r3\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tldr\tr7, [pc, #88]\t@ (308134 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16a300>)\n \tmovs\tr2, r3\n-\tldrsb\tr4, [r6, r3]\n+\tldrsb\tr4, [r7, r3]\n \tmovs\tr0, r2\n-\tldrsb\tr2, [r1, r3]\n+\tldrsb\tr2, [r2, r3]\n \tmovs\tr0, r2\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n unsigned int DataProcessing::performSDBGChimeraSearch_Pool >(ReadPool&, HashStatistics >&, unsigned int, std::vector >*, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/dataprocessing.C:356\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r3\n@@ -1566669,41 +1566669,41 @@\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [pc, #392]\t@ (308618 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16a7e4>)\n \tmovs\tr2, r3\n \tldr\tr6, [pc, #296]\t@ (3085bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16a788>)\n \tmovs\tr2, r3\n-\tstrh\tr0, [r0, #28]\n+\tstrh\tr0, [r1, #28]\n \tmovs\tr7, r1\n-\tadds\tr6, #106\t@ 0x6a\n+\tadds\tr6, #114\t@ 0x72\n \tmovs\tr0, r2\n-\tldr\tr0, [r6, #92]\t@ 0x5c\n+\tldr\tr4, [r7, #92]\t@ 0x5c\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr0, [r2, #84]\t@ 0x54\n+\tldr\tr4, [r3, #84]\t@ 0x54\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldr\tr4, [pc, #672]\t@ (308750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16a91c>)\n \tmovs\tr2, r3\n-\tasrs\tr0, r3, #8\n+\tasrs\tr4, r4, #8\n \tmovs\tr6, r1\n-\tasrs\tr4, r2, #8\n+\tasrs\tr0, r4, #8\n \tmovs\tr6, r1\n-\tcmp\tr0, #84\t@ 0x54\n+\tcmp\tr0, #92\t@ 0x5c\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr2, [r3, r6]\n+\tstrh\tr2, [r4, r6]\n \tmovs\tr0, r2\n \tlsrs\tr4, r7, #14\n \tmovs\tr0, r0\n unsigned int DataProcessing::performSDBGEdits_Pool(ReadPool&, HashStatistics&, unsigned int):\n ./src/mira/dataprocessing.C:424\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/dataprocessing.C:432\n@@ -1567138,41 +1567138,41 @@\n \teors\tr1, r3\n \tldr\tr2, [pc, #488]\t@ (3089d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16aba0>)\n \tmovs\tr2, r3\n \tldr\tr2, [pc, #480]\t@ (3089d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16ab9c>)\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr2, [r5, #30]\n+\tldrb\tr2, [r6, #30]\n \tmovs\tr7, r1\n-\tadds\tr2, #148\t@ 0x94\n+\tadds\tr2, #156\t@ 0x9c\n \tmovs\tr0, r2\n-\tldr\tr0, [r3, #32]\n+\tldr\tr4, [r4, #32]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [r5, #16]\n+\tldr\tr0, [r7, #16]\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr0, [r3, r4]\n+\tstr\tr0, [r4, r4]\n \tmovs\tr0, r2\n-\tstr\tr0, [r2, r4]\n+\tstr\tr0, [r3, r4]\n \tmovs\tr0, r2\n-\tstr\tr0, [r2, r4]\n+\tstr\tr0, [r3, r4]\n \tmovs\tr0, r2\n-\tstr\tr2, [r1, r4]\n+\tstr\tr2, [r2, r4]\n \tmovs\tr0, r2\n \tldr\tr0, [pc, #368]\t@ (308990 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16ab5c>)\n \tmovs\tr2, r3\n-\tlsrs\tr0, r5, #22\n+\tlsrs\tr4, r6, #22\n \tmovs\tr6, r1\n-\tlsrs\tr4, r4, #22\n+\tlsrs\tr0, r6, #22\n \tmovs\tr6, r1\n-\tmovs\tr3, #228\t@ 0xe4\n+\tmovs\tr3, #236\t@ 0xec\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1567805,41 +1567805,41 @@\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tlr, r2\n \tmovs\tr2, r3\n \tcmp\tip, r2\n \tmovs\tr2, r3\n-\tldrb\tr2, [r1, #11]\n+\tldrb\tr2, [r2, #11]\n \tmovs\tr7, r1\n-\tcmp\tr5, #180\t@ 0xb4\n+\tcmp\tr5, #188\t@ 0xbc\n \tmovs\tr0, r2\n-\tstr\tr0, [r7, #80]\t@ 0x50\n+\tstr\tr4, [r0, #84]\t@ 0x54\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr0, [r2, #68]\t@ 0x44\n+\tstr\tr4, [r3, #68]\t@ 0x44\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #264]\t@ (308df0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16afbc>)\n+\tldr\tr4, [pc, #296]\t@ (308e10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16afdc>)\n \tmovs\tr0, r2\n-\tldr\tr4, [pc, #216]\t@ (308dc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16af90>)\n+\tldr\tr4, [pc, #248]\t@ (308de4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16afb0>)\n \tmovs\tr0, r2\n-\tldr\tr4, [pc, #216]\t@ (308dc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16af94>)\n+\tldr\tr4, [pc, #248]\t@ (308de8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16afb4>)\n \tmovs\tr0, r2\n-\tldr\tr4, [pc, #192]\t@ (308db4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16af80>)\n+\tldr\tr4, [pc, #224]\t@ (308dd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16afa0>)\n \tmovs\tr0, r2\n \tbics\tr2, r0\n \tmovs\tr2, r3\n-\tlsrs\tr6, r1, #3\n+\tlsrs\tr2, r3, #3\n \tmovs\tr6, r1\n-\tlsrs\tr2, r1, #3\n+\tlsrs\tr6, r2, #3\n \tmovs\tr6, r1\n-\tsubs\tr2, r1, #4\n+\tsubs\tr2, r2, #4\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1568473,41 +1568473,41 @@\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr6, r6\n \tmovs\tr2, r3\n \tlsls\tr4, r6\n \tmovs\tr2, r3\n-\tstrb\tr2, [r5, #23]\n+\tstrb\tr2, [r6, #23]\n \tmovs\tr7, r1\n-\tcmp\tr0, #212\t@ 0xd4\n+\tcmp\tr0, #220\t@ 0xdc\n \tmovs\tr0, r2\n-\tstr\tr0, [r3, #4]\n+\tstr\tr4, [r4, #4]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrsh\tr0, [r6, r5]\n+\tldrsh\tr4, [r7, r5]\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tbx\tip\n+\tbx\tsp\n \tmovs\tr0, r2\n-\tbx\tsl\n+\tbx\tfp\n \tmovs\tr0, r2\n-\tbx\tsl\n+\tbx\tfp\n \tmovs\tr0, r2\n-\tbx\tsl\n+\tbx\tfp\n \tmovs\tr0, r2\n \tsubs\tr6, #162\t@ 0xa2\n \tmovs\tr2, r3\n-\tlsls\tr6, r5, #15\n+\tlsls\tr2, r7, #15\n \tmovs\tr6, r1\n-\tlsls\tr2, r5, #15\n+\tlsls\tr6, r6, #15\n \tmovs\tr6, r1\n-\tsubs\tr2, r5, r0\n+\tsubs\tr2, r6, r0\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1569141,39 +1569141,39 @@\n \teors\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr3, #214\t@ 0xd6\n \tmovs\tr2, r3\n \tsubs\tr3, #212\t@ 0xd4\n \tmovs\tr2, r3\n-\tstrb\tr2, [r1, #4]\n+\tstrb\tr2, [r2, #4]\n \tmovs\tr7, r1\n-\tmovs\tr3, #244\t@ 0xf4\n+\tmovs\tr3, #252\t@ 0xfc\n \tmovs\tr0, r2\n-\tldrh\tr0, [r7, r5]\n+\tldrh\tr4, [r0, r6]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr0, [r2, r2]\n+\tldrh\tr4, [r3, r2]\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tcmp\tr2, r0\n+\tcmp\tr2, r1\n \tmovs\tr0, r2\n-\tnegs\tr6, r6\n+\tnegs\tr6, r7\n \tmovs\tr0, r2\n-\tnegs\tr6, r6\n+\tnegs\tr6, r7\n \tmovs\tr0, r2\n-\tnegs\tr0, r6\n+\tnegs\tr0, r7\n \tmovs\tr0, r2\n \tsubs\tr1, #194\t@ 0xc2\n \tmovs\tr2, r3\n-\tvhadd.u8\td0, d14, d13\n-\tvhadd.u8\td0, d10, d13\n-\tasrs\tr2, r1, #21\n+\tvhadd.u16\td0, d10, d13\n+\tvhadd.u16\td0, d6, d13\n+\tasrs\tr2, r2, #21\n \tmovs\tr0, r2\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1570541,15 +1570541,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t30a070 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16c23c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (30a098 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16c264>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\t\t\t@ instruction: 0xf4c0000d\n+\t\t\t@ instruction: 0xf4cc000d\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.n\t30a16e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16c33a>\n /usr/include/c++/10/bits/vector.tcc:611\n@@ -1570956,15 +1570956,15 @@\n \tadd\tr0, pc\n \tblx\tb6dc \n \tmovw\tsl, #65528\t@ 0xfff8\n \tmovt\tsl, #32767\t@ 0x7fff\n \tb.n\t30a350 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16c51c>\n \tnop\n \t...\n-\tsbc.w\tr0, r2, #13\n+\tsbc.w\tr0, lr, #13\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:614\n \tcmp\tr1, #0\n \tbeq.w\t30a61a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16c7e6>\n /usr/include/c++/10/bits/vector.tcc:611\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr5, r0\n@@ -1571252,15 +1571252,15 @@\n \tmovt\tr9, #32767\t@ 0x7fff\n \tb.n\t30a62a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16c7f6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (30a688 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16c854>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcdp\t0, 13, cr0, cr0, cr13, {0}\n+\tcdp\t0, 13, cr0, cr12, cr13, {0}\n ReadPool::ReadContainer::provideEmptyRead():\n ./src/mira/../../src/mira/readpool.H:94\n \tldr.w\tr2, [pc, #1592]\t@ 30acc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16ce94>\n \tldr.w\tr3, [pc, #1592]\t@ 30accc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16ce98>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -1573067,33 +1573067,33 @@\n \tmovs\tr2, r3\n \tsubs\tr0, r6, #2\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrh\tr6, [r0, r7]\n+\tstrh\tr6, [r1, r7]\n \tmovs\tr7, r1\n-\tlsls\tr4, r5, #26\n+\tlsls\tr4, r6, #26\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr6, #102\t@ 0x66\n+\tmovs\tr6, #110\t@ 0x6e\n \tmovs\tr0, r2\n-\tbhi.n\t30b438 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16d604>\n+\tbhi.n\t30b448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16d614>\n \tmovs\tr6, r1\n-\tsubs\tr5, #160\t@ 0xa0\n+\tsubs\tr5, #172\t@ 0xac\n \tmovs\tr6, r1\n-\tmovs\tr4, #218\t@ 0xda\n+\tmovs\tr4, #226\t@ 0xe2\n \tmovs\tr0, r2\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n-\tmovs\tr4, #50\t@ 0x32\n+\tmovs\tr4, #58\t@ 0x3a\n \tmovs\tr0, r2\n-\tstrh\tr2, [r2, #28]\n+\tstrh\tr2, [r3, #28]\n \tmovs\tr1, r2\n \tsubs\tr6, r7, r3\n \tmovs\tr2, r3\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s20\n \tmov\tr0, r7\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n@@ -1574741,36 +1574741,36 @@\n \tldr.w\tr8, [pc, #36]\t@ 30c29c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e468>\n \tmov\tr0, r4\n \tldr\tr4, [pc, #36]\t@ (30c2a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e46c>)\n \tldr\tr6, [sp, #20]\n \tldr\tr2, [r6, r4]\n \tldr.w\tr1, [r6, r8]\n \tblx\tb700 <__cxa_throw@plt>\n-\tsubs\tr0, #190\t@ 0xbe\n+\tsubs\tr0, #202\t@ 0xca\n \tmovs\tr6, r1\n-\tbgt.n\t30c258 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e424>\n+\tbgt.n\t30c270 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e43c>\n \tmovs\tr5, r1\n-\tbgt.n\t30c250 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e41c>\n+\tbgt.n\t30c268 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16e434>\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xf31c000f\n+\tssat16\tr0, #16, r4\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr6, r0, #24\n+\tasrs\tr6, r1, #24\n \tmovs\tr0, r2\n \tlsls\tr4, r0, #22\n \tmovs\tr0, r0\n ./src/mira/dataprocessing.C:547\n \tcmp\tr2, r0\n \tble.w\t30b2aa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16d476>\n ./src/mira/dataprocessing.C:548\n@@ -1575759,32 +1575759,32 @@\n \tmovs\tr2, r3\n \tlsrs\tr0, r6, #2\n \tmovs\tr2, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tsubs\tr5, #198\t@ 0xc6\n+\tsubs\tr5, #206\t@ 0xce\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xf0ac000f\n+\t\t\t@ instruction: 0xf0b4000f\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr6, r4, #1\n+\tasrs\tr6, r5, #1\n \tmovs\tr0, r2\n-\tstmia\tr2!, {r1, r6, r7}\n+\tstmia\tr2!, {r1, r3, r6, r7}\n \tmovs\tr6, r1\n-\tmovs\tr7, #160\t@ 0xa0\n+\tmovs\tr7, #172\t@ 0xac\n \tmovs\tr6, r1\n-\tlsrs\tr2, r3, #27\n+\tlsrs\tr2, r4, #27\n \tmovs\tr0, r2\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n-\tlsrs\tr2, r6, #24\n+\tlsrs\tr2, r7, #24\n \tmovs\tr0, r2\n-\tldr\tr2, [r2, #88]\t@ 0x58\n+\tldr\tr2, [r3, #88]\t@ 0x58\n \tmovs\tr1, r2\n \tlsls\tr6, r7, #19\n \tmovs\tr2, r3\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s20\n \tmov\tr0, r7\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n@@ -1577432,21 +1577432,21 @@\n \tldr.w\tr8, [pc, #36]\t@ 30d89c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16fa68>\n \tmov\tr0, r4\n \tldr\tr4, [pc, #36]\t@ (30d8a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16fa6c>)\n \tldr\tr6, [sp, #20]\n \tldr\tr2, [r6, r4]\n \tldr.w\tr1, [r6, r8]\n \tblx\tb700 <__cxa_throw@plt>\n-\tmovs\tr2, #190\t@ 0xbe\n+\tmovs\tr2, #202\t@ 0xca\n \tmovs\tr6, r1\n-\tstmia\tr6!, {r2, r5, r6, r7}\n+\tstmia\tr6!, {r4, r5, r6, r7}\n \tmovs\tr5, r1\n-\tstmia\tr6!, {r1, r2, r3, r4, r6, r7}\n+\tstmia\tr6!, {r1, r3, r5, r6, r7}\n \tmovs\tr5, r1\n-\tble.n\t30d8d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16fa9c>\n+\tble.n\t30d8e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16faac>\n \tmovs\tr7, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1577454,15 +1577454,15 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #1\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr6, r0\n+\tmovs\tr6, r1\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #4\n \tmovs\tr0, r0\n ./src/mira/dataprocessing.C:547\n \tcmp\tr2, r0\n \tble.w\t30c8aa , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x16ea76>\n ./src/mira/dataprocessing.C:548\n@@ -1578451,30 +1578451,30 @@\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf2b80019\n \t\t\t@ instruction: 0xf2b00019\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tmovs\tr7, #198\t@ 0xc6\n+\tmovs\tr7, #206\t@ 0xce\n \tmovs\tr7, r1\n-\tbge.n\t30e000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1701cc>\n+\tbge.n\t30e010 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1701dc>\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa66000f\n-\tadd\tr4, sp, #776\t@ 0x308\n+\t\t\t@ instruction: 0xfa6e000f\n+\tadd\tr4, sp, #808\t@ 0x328\n \tmovs\tr6, r1\n-\tasrs\tr0, r4, #6\n+\tasrs\tr4, r5, #6\n \tmovs\tr6, r1\n-\tldr.w\tr0, [r8, #15]\n+\tstr??.w\tr0, [r0, #15]\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n-\tldrh.w\tr0, [r2, pc]\n-\tldrsb\tr2, [r2, r6]\n+\tldrh.w\tr0, [sl, pc]\n+\tldrsb\tr2, [r3, r6]\n \tmovs\tr1, r2\n \tmrc\t0, 7, r0, cr14, cr9, {0}\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s20\n \tmov\tr0, r7\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n@@ -1580157,31 +1580157,31 @@\n \tbne.w\t30e7f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1709bc>\n ./src/mira/dataprocessing.C:586\n \tldr\tr0, [r2, #4]\n \tldr.w\tr3, [r6, #-12]\n \tcmp\tr0, r3\n \tbne.w\t30e7f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1709bc>\n \tb.n\t30e814 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1709e0>\n-\tlsrs\tr0, r5, #18\n+\tlsrs\tr4, r6, #18\n \tmovs\tr6, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tsp, #184\t@ 0xb8\n+\tadd\tsp, #232\t@ 0xe8\n \tmovs\tr5, r1\n-\tadd\tsp, #160\t@ 0xa0\n+\tadd\tsp, #208\t@ 0xd0\n \tmovs\tr5, r1\n-\tstmia\tr6!, {r1, r2, r5, r6}\n+\tstmia\tr6!, {r1, r2, r3, r5, r6}\n \tmovs\tr7, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1580689,15 +1580689,15 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t30f352 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17151e>\n \tb.n\t30f364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x171530>\n /usr/include/c++/10/bits/stl_bvector.h:549\n \tb.n\t30f30c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1714d8>\n \tb.n\t30f306 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1714d2>\n \tnop\n-\tstmdb\tsl, {r0, r1, r2, r3}\n+\tldmdb\tr2, {r0, r1, r2, r3}\n \tlsrs\tr0, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n@@ -1581267,32 +1581267,32 @@\n \tmovs\tr1, r3\n \tblt.n\t30f6f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1718c4>\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tasrs\tr6, r0, #3\n+\tasrs\tr6, r1, #3\n \tmovs\tr7, r1\n-\tstmia\tr3!, {r2, r3, r5, r7}\n+\tstmia\tr3!, {r2, r4, r5, r7}\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t30fe7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172048>\n+\tb.n\t30fe8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172058>\n \tmovs\tr7, r1\n-\tstr\tr5, [sp, #776]\t@ 0x308\n+\tstr\tr5, [sp, #808]\t@ 0x328\n \tmovs\tr6, r1\n-\t\t\t@ instruction: 0xfaa0000d\n-\tb.n\t30fb6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x171d38>\n+\t\t\t@ instruction: 0xfaac000d\n+\tb.n\t30fb7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x171d48>\n \tmovs\tr7, r1\n \tlsls\tr0, r2, #29\n \tmovs\tr0, r0\n-\tb.n\t30fa28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x171bf4>\n+\tb.n\t30fa38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x171c04>\n \tmovs\tr7, r1\n-\tlsls\tr2, r2\n+\tlsls\tr2, r3\n \tmovs\tr1, r2\n \tbvc.n\t30f7c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x171994>\n \tmovs\tr1, r3\n /usr/include/c++/10/ostream:611\n \tvmov\tr1, s20\n \tmov\tr0, r7\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n@@ -1582976,30 +1582976,30 @@\n \tbne.w\t30fef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1720bc>\n ./src/mira/dataprocessing.C:586\n \tldr\tr0, [r2, #4]\n \tldr.w\tr3, [r6, #-12]\n \tcmp\tr0, r3\n \tbne.w\t30fef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1720bc>\n \tb.n\t30ff14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1720e0>\n-\tsub.w\tr0, r8, #9240576\t@ 0x8d0000\n+\tsubs.w\tr0, r4, #9240576\t@ 0x8d0000\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #184]\t@ 0xb8\n+\tldr\tr1, [sp, #232]\t@ 0xe8\n \tmovs\tr5, r1\n-\tldr\tr1, [sp, #160]\t@ 0xa0\n+\tldr\tr1, [sp, #208]\t@ 0xd0\n \tmovs\tr5, r1\n-\tadd\tr7, sp, #408\t@ 0x198\n+\tadd\tr7, sp, #440\t@ 0x1b8\n \tmovs\tr7, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1583507,15 +1583507,15 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t310a52 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172c1e>\n \tb.n\t310a64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172c30>\n /usr/include/c++/10/bits/stl_bvector.h:549\n \tb.n\t310a0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172bd8>\n \tb.n\t310a06 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172bd2>\n \tnop\n-\tbcs.n\t310a94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172c60>\n+\tbcs.n\t310aa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x172c70>\n \tmovs\tr7, r1\n \tlsrs\tr4, r1, #14\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1584657,30 +1584657,30 @@\n \tmovs\tr1, r3\n \tlsls\tr0, r2, #23\n \tmovs\tr0, r0\n \tbkpt\t0x0056\n \tmovs\tr1, r3\n \tlsrs\tr0, r1, #4\n \tmovs\tr0, r0\n-\tcmp\tr1, #92\t@ 0x5c\n+\tcmp\tr1, #100\t@ 0x64\n \tmovs\tr7, r1\n-\tsubs\tr6, r7, r4\n+\tsubs\tr6, r0, r5\n \tmovs\tr7, r1\n-\tsubs\tr0, r5, r5\n+\tsubs\tr0, r6, r5\n \tmovs\tr7, r1\n-\tcmp\tr0, #170\t@ 0xaa\n+\tcmp\tr0, #178\t@ 0xb2\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xeb28000e\n-\tcmp\tr1, #50\t@ 0x32\n+\t\t\t@ instruction: 0xeb30000e\n+\tcmp\tr1, #58\t@ 0x3a\n \tmovs\tr7, r1\n-\tstmia\tr6!, {r1, r3, r6}\n+\tstmia\tr6!, {r1, r4, r6}\n \tmovs\tr7, r1\n-\tsubs\tr4, r2, r4\n+\tsubs\tr4, r3, r4\n \tmovs\tr7, r1\n-\tsubs\tr6, r7, r4\n+\tsubs\tr6, r0, r5\n \tmovs\tr7, r1\n bool boost::regex_search<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, char, boost::regex_traits > >(__gnu_cxx::__normal_iterator, std::allocator > >, __gnu_cxx::__normal_iterator, std::allocator > >, boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >&, boost::basic_regex > > const&, boost::regex_constants::_match_flags, __gnu_cxx::__normal_iterator, std::allocator > >):\n /usr/include/boost/regex/v4/regex_search.hpp:46\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #420]\t@ (311424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1735f0>)\n \tldr\tr4, [pc, #424]\t@ (311428 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1735f4>)\n \tsub\tsp, #136\t@ 0x88\n@@ -1584935,25 +1584935,25 @@\n \tmovs\tr0, r0\n \tpop\t{r1, r2, r4, r6, r7}\n \tmovs\tr1, r3\n \tpop\t{r1, r3, r4, r5, r7}\n \tmovs\tr1, r3\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tasrs\tr4, r2, #30\n+\tasrs\tr4, r3, #30\n \tmovs\tr7, r1\n-\tasrs\tr2, r3, #32\n+\tasrs\tr2, r4, #32\n \tmovs\tr7, r1\n-\tasrs\tr4, r0, #1\n+\tasrs\tr4, r1, #1\n \tmovs\tr7, r1\n-\tcmp\tr1, #32\n+\tcmp\tr1, #40\t@ 0x28\n \tmovs\tr7, r1\n-\tadds\tr6, r5, r4\n+\tadds\tr6, r6, r4\n \tmovs\tr7, r1\n-\tadds\tr0, r3, r5\n+\tadds\tr0, r4, r5\n \tmovs\tr7, r1\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::match_prefix():\n /usr/include/boost/smart_ptr/shared_ptr.hpp:742\n \tldr\tr3, [r0, #36]\t@ 0x24\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:343\n \tmovs\tr1, #0\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:341\n@@ -1585258,31 +1585258,31 @@\n \tldr\tr1, [pc, #40]\t@ (311664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x173830>)\n \tldr\tr0, [pc, #44]\t@ (311668 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x173834>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tsubs\tr0, r7, r2\n+\tsubs\tr0, r0, r3\n \tmovs\tr7, r1\n-\tlsrs\tr2, r1, #31\n+\tlsrs\tr2, r2, #31\n \tmovs\tr7, r1\n-\tadds\tr4, r6, #1\n+\tadds\tr4, r7, #1\n \tmovs\tr7, r1\n-\tmovs\tr5, #180\t@ 0xb4\n+\tmovs\tr5, #188\t@ 0xbc\n \tmovs\tr7, r1\n-\tlsrs\tr6, r6, #30\n+\tlsrs\tr6, r7, #30\n \tmovs\tr7, r1\n-\tmovs\tr2, #160\t@ 0xa0\n+\tmovs\tr2, #168\t@ 0xa8\n \tmovs\tr7, r1\n-\tmovs\tr4, #252\t@ 0xfc\n+\tmovs\tr5, #4\n \tmovs\tr7, r1\n-\tasrs\tr6, r3, #27\n+\tasrs\tr6, r4, #27\n \tmovs\tr7, r1\n-\tasrs\tr0, r1, #28\n+\tasrs\tr0, r2, #28\n \tmovs\tr7, r1\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::find_restart_buf():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:940\n \tldr\tr1, [r0, #12]\n \tldr\tr2, [r0, #20]\n \tcmp\tr1, r2\n \tbeq.n\t311678 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x173844>\n@@ -1585475,25 +1585475,25 @@\n \tldr\tr1, [pc, #28]\t@ (3117dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1739a8>)\n \tldr\tr0, [pc, #32]\t@ (3117e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1739ac>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tstmia\tr1!, {r3, r5}\n+\tstmia\tr1!, {r4, r5}\n \tmovs\tr7, r1\n-\tasrs\tr6, r5, #21\n+\tasrs\tr6, r6, #21\n \tmovs\tr7, r1\n-\tasrs\tr0, r3, #22\n+\tasrs\tr0, r4, #22\n \tmovs\tr7, r1\n-\tstmia\tr1!, {r2, r4, r7}\n+\tstmia\tr1!, {r2, r3, r4, r7}\n \tmovs\tr7, r1\n-\tasrs\tr2, r3, #21\n+\tasrs\tr2, r4, #21\n \tmovs\tr7, r1\n-\tasrs\tr4, r0, #22\n+\tasrs\tr4, r1, #22\n \tmovs\tr7, r1\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::find_restart_word():\n /usr/include/boost/smart_ptr/shared_ptr.hpp:742\n \tldr\tr3, [r0, #36]\t@ 0x24\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:869\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/boost/smart_ptr/shared_ptr.hpp:742\n@@ -1585892,25 +1585892,25 @@\n \tmovw\tr2, #630\t@ 0x276\n \tldr\tr1, [pc, #28]\t@ (311b20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x173cec>)\n \tldr\tr0, [pc, #28]\t@ (311b24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x173cf0>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tlsls\tr2, r3, #31\n+\tlsls\tr2, r4, #31\n \tmovs\tr7, r1\n-\tlsrs\tr0, r0, #4\n+\tlsrs\tr0, r1, #4\n \tmovs\tr7, r1\n-\tlsrs\tr2, r5, #4\n+\tlsrs\tr2, r6, #4\n \tmovs\tr7, r1\n-\tpop\t{r1, r2, r3, r6, r7, pc}\n+\tpop\t{r1, r2, r4, r6, r7, pc}\n \tmovs\tr7, r1\n-\tasrs\tr4, r2, #8\n+\tasrs\tr4, r3, #8\n \tmovs\tr7, r1\n-\tasrs\tr6, r7, #8\n+\tasrs\tr6, r0, #9\n \tmovs\tr7, r1\n boost::re_detail_107400::perl_matcher<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, boost::regex_traits > >::find_restart_any():\n /usr/include/boost/regex/v4/perl_matcher_common.hpp:836\n \tpush\t{r3, r4, r5, lr}\n /usr/include/boost/smart_ptr/shared_ptr.hpp:742\n \tldr\tr3, [r0, #36]\t@ 0x24\n \tldr\tr5, [r3, #0]\n@@ -1585977,25 +1585977,25 @@\n \tmovw\tr2, #630\t@ 0x276\n \tldr\tr1, [pc, #28]\t@ (311bb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x173d7c>)\n \tldr\tr0, [pc, #28]\t@ (311bb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x173d80>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tpop\t{r1, r2, r5, r6, r7, pc}\n+\tpop\t{r1, r2, r3, r5, r6, r7, pc}\n \tmovs\tr7, r1\n-\tasrs\tr4, r5, #6\n+\tasrs\tr4, r6, #6\n \tmovs\tr7, r1\n-\tasrs\tr6, r2, #7\n+\tasrs\tr6, r3, #7\n \tmovs\tr7, r1\n-\tpop\t{r1, r2, r3, r4, r5, pc}\n+\tpop\t{r1, r2, r6, pc}\n \tmovs\tr7, r1\n-\tasrs\tr4, r0, #6\n+\tasrs\tr4, r1, #6\n \tmovs\tr7, r1\n-\tasrs\tr6, r5, #6\n+\tasrs\tr6, r6, #6\n \tmovs\tr7, r1\n Dynamic::matinit(char, char, int):\n ./src/mira/dynamic.C:153\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r2\n \tmov\tr4, r1\n ./src/mira/dynamic.C:155\n@@ -1589553,15 +1589553,15 @@\n std::ctype const& std::__check_facet >(std::ctype const*):\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tldr\tr0, [sp, #592]\t@ 0x250\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #976\t@ (adr r6, 313b44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x175d10>)\n+\tadd\tr6, pc, #1008\t@ (adr r6, 313b64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x175d30>)\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Dynamic::coutWhatWasGiven():\n ./src/mira/dynamic.C:1541\n \tldr\tr3, [pc, #356]\t@ (3138e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x175aac>)\n std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*):\n@@ -1589829,41 +1589829,41 @@\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t3137e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1759ae>\n \tnop\n \tstr\tr7, [sp, #888]\t@ 0x378\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr6, r2, r2\n+\tsubs\tr6, r3, r2\n \tmovs\tr0, r2\n-\tsubs\tr6, r6, r2\n+\tsubs\tr6, r7, r2\n \tmovs\tr0, r2\n-\tsubs\tr6, r4, r2\n+\tsubs\tr6, r5, r2\n \tmovs\tr0, r2\n-\tsubs\tr4, r3, r2\n+\tsubs\tr4, r4, r2\n \tmovs\tr0, r2\n-\tsubs\tr2, r2, r2\n+\tsubs\tr2, r3, r2\n \tmovs\tr0, r2\n-\tsubs\tr0, r1, r2\n+\tsubs\tr0, r2, r2\n \tmovs\tr0, r2\n-\tsubs\tr2, r0, r2\n+\tsubs\tr2, r1, r2\n \tmovs\tr0, r2\n-\tsubs\tr6, r7, r1\n+\tsubs\tr6, r0, r2\n \tmovs\tr0, r2\n-\tsubs\tr2, r6, r1\n+\tsubs\tr2, r7, r1\n \tmovs\tr0, r2\n-\tsubs\tr6, r4, r1\n+\tsubs\tr6, r5, r1\n \tmovs\tr0, r2\n-\tsubs\tr2, r3, r1\n+\tsubs\tr2, r4, r1\n \tmovs\tr0, r2\n-\tldr\tr5, [pc, #440]\t@ (313ad0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x175c9c>)\n+\tldr\tr5, [pc, #472]\t@ (313af0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x175cbc>)\n \tmovs\tr6, r1\n-\tadds\tr0, r0, r7\n+\tadds\tr0, r1, r7\n \tmovs\tr0, r2\n-\tadds\tr2, r3, r6\n+\tadds\tr2, r4, r6\n \tmovs\tr0, r2\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream():\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n std::basic_ios >::basic_ios():\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n@@ -1590550,21 +1590550,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #31\n \tmovs\tr0, r0\n \tstr\tr4, [sp, #168]\t@ 0xa8\n \tmovs\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr4, r5, #24\n+\tasrs\tr4, r6, #24\n \tmovs\tr0, r2\n-\tadd\tr1, pc, #152\t@ (adr r1, 313e64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x176030>)\n+\tadd\tr1, pc, #184\t@ (adr r1, 313e84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x176050>)\n \tmovs\tr6, r1\n-\tasrs\tr4, r1, #23\n+\tasrs\tr4, r2, #23\n \tmovs\tr0, r2\n-\tasrs\tr2, r5, #22\n+\tasrs\tr2, r6, #22\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Dynamic::setSequences(char const*, unsigned int, char const*, unsigned int, bool, int):\n ./src/mira/dynamic.C:510\n@@ -1591340,39 +1591340,39 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr0, r5, #11\n+\tasrs\tr0, r6, #11\n \tmovs\tr0, r2\n-\tasrs\tr4, r3, #11\n+\tasrs\tr4, r4, #11\n \tmovs\tr0, r2\n-\tasrs\tr6, r2, #11\n+\tasrs\tr6, r3, #11\n \tmovs\tr0, r2\n-\tasrs\tr0, r7, #10\n+\tasrs\tr0, r0, #11\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tasrs\tr4, r1, #7\n+\tasrs\tr4, r2, #7\n \tmovs\tr0, r2\n-\tasrs\tr0, r0, #7\n+\tasrs\tr0, r1, #7\n \tmovs\tr0, r2\n-\tasrs\tr2, r1, #9\n+\tasrs\tr2, r2, #9\n \tmovs\tr0, r2\n-\tasrs\tr4, r3, #6\n+\tasrs\tr4, r4, #6\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr0, r7, #6\n+\tasrs\tr0, r0, #7\n \tmovs\tr0, r2\n-\tasrs\tr0, r0, #5\n+\tasrs\tr0, r1, #5\n \tmovs\tr0, r2\n ./src/mira/dynamic.C:564\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n ./src/mira/dynamic.C:561\n \tmov\tr0, r5\n \tbl\t3e4670 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x220d8>\n@@ -1591621,17 +1591621,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r6, #24]\n \tmovs\tr1, r3\n \tldrh\tr2, [r4, #24]\n \tmovs\tr1, r3\n-\tlsrs\tr6, r4, #31\n+\tlsrs\tr6, r5, #31\n \tmovs\tr0, r2\n-\tasrs\tr4, r1, #32\n+\tasrs\tr4, r2, #32\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Dynamic::computeMatrix():\n \tmovs\tr0, r0\n@@ -1593216,21 +1593216,21 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tstrh\tr6, [r4, #14]\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #176]\t@ 0xb0\n+\tstr\tr0, [sp, #208]\t@ 0xd0\n \tmovs\tr6, r1\n \tstrh\tr6, [r5, #12]\n \tmovs\tr1, r3\n-\torrs\tr2, r4\n+\torrs\tr2, r5\n \tmovs\tr6, r1\n-\torrs\tr0, r7\n+\tmuls\tr0, r0\n \tmovs\tr6, r1\n \tlsrs\tr4, r3, #27\n \tmovs\tr5, r1\n GBF::checkIfCommentInOldMIRAGBFstyle(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/gbf_parse.C:865\n \tldr\tr3, [r0, #4]\n \tcbz\tr3, 314f94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x177160>\n@@ -1593503,17 +1593503,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbls.n\t31502c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1771f8>\n \tmovs\tr3, r3\n \tldrb\tr6, [r3, #27]\n \tmovs\tr1, r3\n-\tstr\tr2, [r5, #92]\t@ 0x5c\n+\tstr\tr2, [r6, #92]\t@ 0x5c\n \tmovs\tr6, r1\n-\tsubs\tr2, #22\n+\tsubs\tr2, #34\t@ 0x22\n \tmovs\tr5, r1\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n@@ -1593745,17 +1593745,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r7, #20]\n \tmovs\tr1, r3\n \tldrb\tr4, [r3, #20]\n \tmovs\tr1, r3\n-\tlsls\tr6, r3, #9\n+\tlsls\tr6, r4, #9\n \tmovs\tr0, r2\n-\tlsls\tr0, r4, #9\n+\tlsls\tr0, r5, #9\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n GBF::getSequence[abi:cxx11](unsigned int) const:\n ./src/mira/gbf_parse.C:171\n@@ -1593882,17 +1593882,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r0, #17]\n \tmovs\tr1, r3\n \tldrb\tr2, [r4, #16]\n \tmovs\tr1, r3\n-\tlsls\tr4, r1, #7\n+\tlsls\tr4, r2, #7\n \tmovs\tr0, r2\n-\tlsls\tr0, r1, #7\n+\tlsls\tr0, r2, #7\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n GBF::getTags(unsigned int) const:\n ./src/mira/gbf_parse.C:190\n@@ -1594017,17 +1594017,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r1, #13]\n \tmovs\tr1, r3\n \tldrb\tr6, [r4, #12]\n \tmovs\tr1, r3\n-\tlsls\tr0, r6, #4\n+\tlsls\tr0, r7, #4\n \tmovs\tr0, r2\n-\tlsls\tr2, r5, #4\n+\tlsls\tr2, r6, #4\n \tmovs\tr0, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n GBF::correctForTagPositionErrors(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/gbf_parse.C:296\n@@ -1594990,19 +1594990,19 @@\n \t...\n \tldrb\tr4, [r1, #9]\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr0, [r7, #8]\n \tmovs\tr1, r3\n-\tlsls\tr4, r6, #5\n+\tlsls\tr4, r7, #5\n \tmovs\tr0, r2\n-\tlsls\tr6, r5, #6\n+\tlsls\tr6, r6, #6\n \tmovs\tr0, r2\n-\tldrh\tr4, [r5, r7]\n+\tldrh\tr4, [r6, r7]\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tstrb\tr2, [r0, #26]\n \tmovs\tr1, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1595010,26 +1595010,26 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmrrc2\t0, 0, r0, r4, cr15\n-\tldc2l\t0, cr0, [r6], #-60\t@ 0xffffffc4\n+\tmrrc2\t0, 0, r0, ip, cr15\n+\tldc2l\t0, cr0, [lr], #-60\t@ 0xffffffc4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfbd4000f\n-\tsmlal\tr0, r0, r0, pc\t@ \n-\t\t\t@ instruction: 0xfbb6000f\n-\tsmmla\tr0, r0, pc, r0\t@ \n-\tldc2\t0, cr0, [sl], #-60\t@ 0xffffffc4\n-\t\t\t@ instruction: 0xfaf0000f\n+\t\t\t@ instruction: 0xfbdc000f\n+\tsmlal\tr0, r0, r8, pc\t@ \n+\t\t\t@ instruction: 0xfbbe000f\n+\tsmmla\tr0, r8, pc, r0\t@ \n+\tmcrr2\t0, 0, r0, r2, cr15\n+\t\t\t@ instruction: 0xfaf8000f\n GBF::getCorrespondingRightBracket(std::__cxx11::basic_string, std::allocator > const&, unsigned int) const:\n ./src/mira/gbf_parse.C:822\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r2\n \tldr\tr2, [pc, #772]\t@ (315f88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x178154>)\n \tldr\tr3, [pc, #772]\t@ (315f8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x178158>)\n \tsub\tsp, #232\t@ 0xe8\n@@ -1595508,27 +1595508,27 @@\n \tmovs\tr0, r0\n \tstrb\tr0, [r2, #11]\n \tmovs\tr1, r3\n \tstrb\tr2, [r4, #9]\n \tmovs\tr1, r3\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tvld4.8\t{d16-d19}, [sl]\n-\tstrb\tr6, [r3, #7]\n+\tldr??.w\tr0, [r2, pc]\n+\tstrb\tr6, [r4, #7]\n \tmovs\tr7, r1\n-\tsmlad\tr0, r8, sp, r0\n-\tvld4.8\t{d0-d3}, [lr]\n+\tsmlawb\tr0, r0, sp, r0\n \tldrsh.w\tr0, [r6, pc]\n-\tvld4.8\t{d16-d19}, [r4]\n+\tldrsh.w\tr0, [lr, pc]\n+\tvld4.8\t{d16-d19}, [ip]\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tvld1.8\t{d0[0]}, [r4]\n-\tvst4.8\t{d0-d3}, [r6]\n+\tvld1.8\t{d0[0]}, [ip]\n+\tvst4.8\t{d0-d3}, [lr]\n GBF::parseGBFLocation(std::__cxx11::basic_string, std::allocator > const&, std::vector >&, int) const:\n ./src/mira/gbf_parse.C:699\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr.w\tr4, [pc, #2268]\t@ 3168a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x178a74>\n \tsub\tsp, #100\t@ 0x64\n \tldr.w\tr2, [pc, #2264]\t@ 3168ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x178a78>\n@@ -1596705,34 +1596705,34 @@\n \tb.n\t316874 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x178a40>\n \tldr\tr4, [r1, #120]\t@ 0x78\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [r7, #96]\t@ 0x60\n \tmovs\tr1, r3\n-\tcmp\tr2, #34\t@ 0x22\n+\tcmp\tr2, #42\t@ 0x2a\n \tmovs\tr6, r1\n-\tcmp\tr2, #56\t@ 0x38\n+\tcmp\tr2, #64\t@ 0x40\n \tmovs\tr6, r1\n \trsbs\tr0, ip, #9175040\t@ 0x8c0000\n-\tcmp\tr2, #12\n+\tcmp\tr2, #20\n \tmovs\tr6, r1\n-\tcmp\tr2, #34\t@ 0x22\n+\tcmp\tr2, #42\t@ 0x2a\n \tmovs\tr6, r1\n-\tcmp\tr1, #254\t@ 0xfe\n+\tcmp\tr2, #6\n \tmovs\tr6, r1\n-\tcmp\tr2, #20\n+\tcmp\tr2, #28\n \tmovs\tr6, r1\n-\tcmp\tr1, #236\t@ 0xec\n+\tcmp\tr1, #244\t@ 0xf4\n \tmovs\tr6, r1\n-\tcmp\tr2, #2\n+\tcmp\tr2, #10\n \tmovs\tr6, r1\n-\tcmp\tr1, #222\t@ 0xde\n+\tcmp\tr1, #230\t@ 0xe6\n \tmovs\tr6, r1\n-\tcmp\tr1, #244\t@ 0xf4\n+\tcmp\tr1, #252\t@ 0xfc\n \tmovs\tr6, r1\n GBF::staticInitialiser():\n ./src/mira/gbf_parse.C:81\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/mira/gbf_parse.C:84\n \tldr\tr6, [pc, #244]\t@ (3169dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x178ba8>)\n ./src/mira/gbf_parse.C:81\n@@ -1597729,28 +1597729,28 @@\n \t...\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr2, [r2, #84]\t@ 0x54\n \tmovs\tr1, r3\n \tstr\tr4, [r1, #84]\t@ 0x54\n \tmovs\tr1, r3\n-\tcdp\t0, 6, cr0, cr4, cr15, {0}\n-\tcdp\t0, 4, cr0, cr8, cr15, {0}\n+\tcdp\t0, 6, cr0, cr12, cr15, {0}\n+\tcdp\t0, 5, cr0, cr0, cr15, {0}\n \tstr\tr2, [r3, #60]\t@ 0x3c\n \tmovs\tr1, r3\n \tlsrs\tr4, r0, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tldcl\t0, cr0, [r4], #60\t@ 0x3c\n-\tldcl\t0, cr0, [r8], #60\t@ 0x3c\n+\tldcl\t0, cr0, [ip], #60\t@ 0x3c\n+\tstc\t0, cr0, [r0, #-60]\t@ 0xffffffc4\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/ext/new_allocator.h:82\n \tstr\tr0, [sp, #4]\n /usr/include/c++/10/bits/basic_string.h:157\n@@ -1598204,25 +1598204,25 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t317282 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17944e>\n \tnop\n \tldc\t0, cr0, [ip], {12}\n \tldc\t0, cr0, [r4], {12}\n \tstc\t0, cr0, [ip], {12}\n \tstc\t0, cr0, [r4], {12}\n-\tadds\tr0, r0, r6\n+\tadds\tr4, r1, r6\n \tmovs\tr5, r1\n-\tb.n\t317144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179310>\n+\tb.n\t317154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179320>\n \tmovs\tr7, r1\n-\tb.n\t3171bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179388>\n+\tb.n\t3171cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179398>\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr2, r3, r4\n+\tadds\tr6, r4, r4\n \tmovs\tr5, r1\n \tstc\t0, cr0, [lr], {12}\n GBF::loadTheFile(std::basic_ifstream >&, unsigned long long):\n ./src/mira/gbf_parse.C:342\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr3, [pc, #2484]\t@ 317c88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179e54>\n \tvpush\t{d8-d10}\n@@ -1599559,39 +1599559,39 @@\n \tnop\n \tldrb\tr4, [r0, r2]\n \tmovs\tr1, r3\n \tldrb\tr6, [r4, r1]\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tb.n\t3178f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179ac4>\n+\tb.n\t317908 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179ad4>\n \tmovs\tr7, r1\n-\tb.n\t317a78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179c44>\n+\tb.n\t317a88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179c54>\n \tmovs\tr7, r1\n-\tb.n\t3177b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179980>\n+\tb.n\t3177c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179990>\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tldr\tr4, [r0, r4]\n \tmovs\tr1, r3\n-\tb.n\t3181ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a3b8>\n+\tb.n\t3181fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a3c8>\n \tmovs\tr7, r1\n-\tb.n\t3181cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a398>\n+\tb.n\t3181dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a3a8>\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tb.n\t318144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a310>\n+\tb.n\t318154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a320>\n \tmovs\tr7, r1\n-\tcmp\tr1, #64\t@ 0x40\n+\tcmp\tr1, #72\t@ 0x48\n \tmovs\tr0, r2\n-\tb.n\t31810c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a2d8>\n+\tb.n\t31811c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a2e8>\n \tmovs\tr7, r1\n-\tb.n\t317edc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a0a8>\n+\tb.n\t317eec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a0b8>\n \tmovs\tr7, r1\n-\tbge.n\t317c4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179e18>\n+\tbge.n\t317c5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x179e28>\n \tmovs\tr6, r1\n /usr/include/c++/10/ext/new_allocator.h:82\n \tcmp\tr5, r0\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr.w\tr6, [sl]\n \tit\tcs\n \tmovcs\tr5, r0\n@@ -1601104,51 +1601104,51 @@\n ./src/mira/gbf_parse.C:534 (discriminator 9)\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t31857c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a748>\n \tb.n\t31869a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a866>\n \tadd\tr2, sp, #512\t@ 0x200\n \tmovs\tr3, r3\n-\tblt.n\t3186c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a894>\n+\tblt.n\t3186d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a8a4>\n \tmovs\tr7, r1\n-\tbls.n\t318780 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a94c>\n+\tbls.n\t318790 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a95c>\n \tmovs\tr7, r1\n-\tbls.n\t318758 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a924>\n+\tbls.n\t318768 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a934>\n \tmovs\tr7, r1\n-\tbls.n\t318744 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a910>\n+\tbls.n\t318754 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a920>\n \tmovs\tr7, r1\n-\tbls.n\t318744 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a910>\n+\tbls.n\t318754 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a920>\n \tmovs\tr7, r1\n-\tbvc.n\t318680 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a84c>\n+\tbvc.n\t318690 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a85c>\n \tmovs\tr7, r1\n \tbls.n\t318614 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a7e0>\n \tmovs\tr4, r1\n \tbls.n\t318608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a7d4>\n \tmovs\tr4, r1\n \tbls.n\t3185fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a7c8>\n \tmovs\tr4, r1\n-\tlsrs\tr2, r1, #23\n+\tlsrs\tr2, r2, #23\n \tmovs\tr6, r1\n-\tlsrs\tr0, r4, #23\n+\tlsrs\tr0, r5, #23\n \tmovs\tr6, r1\n-\tlsrs\tr2, r7, #22\n+\tlsrs\tr2, r0, #23\n \tmovs\tr6, r1\n-\tlsrs\tr0, r2, #23\n+\tlsrs\tr0, r3, #23\n \tmovs\tr6, r1\n \tbls.n\t318784 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a950>\n \tmovs\tr4, r1\n \tbls.n\t31875c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a928>\n \tmovs\tr4, r1\n-\tlsrs\tr6, r5, #21\n+\tlsrs\tr6, r6, #21\n \tmovs\tr6, r1\n-\tlsrs\tr4, r0, #22\n+\tlsrs\tr4, r1, #22\n \tmovs\tr6, r1\n-\tbpl.n\t31862c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a7f8>\n+\tbpl.n\t31863c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a808>\n \tmovs\tr7, r1\n-\tbpl.n\t318694 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a860>\n+\tbpl.n\t3186a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a870>\n \tmovs\tr7, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tbhi.n\t318688 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17a854>\n \tmovs\tr4, r1\n@@ -1601524,25 +1601524,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tbx\tr0\n \tmovs\tr1, r3\n-\tbcs.n\t318960 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17ab2c>\n+\tbcs.n\t318970 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17ab3c>\n \tmovs\tr7, r1\n-\tbcs.n\t318aa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17ac74>\n+\tbcs.n\t318ab8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17ac84>\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [r4, #84]\t@ 0x54\n+\tstr\tr2, [r6, #84]\t@ 0x54\n \tmovs\tr5, r1\n-\tbne.n\t3189e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17abb0>\n+\tbne.n\t3189f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17abc0>\n \tmovs\tr7, r1\n std::unordered_map, std::allocator >, std::__cxx11::basic_string, std::allocator >, std::hash, std::allocator > >, std::equal_to, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > > >::~unordered_map():\n /usr/include/c++/10/bits/unordered_map.h:102\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n /usr/include/c++/10/bits/hashtable.h:421\n \tldr\tr4, [r0, #8]\n@@ -1602975,15 +1602975,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t319406 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17b5d2>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (3195bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17b788>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tvaddl.u16\tq0, d12, d12\n+\tvaddl.u32\tq0, d8, d12\n std::_Hashtable, std::allocator >, std::pair, std::allocator > const, std::__cxx11::basic_string, std::allocator > >, std::allocator, std::allocator > const, std::__cxx11::basic_string, std::allocator > > >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_rehash(unsigned int, unsigned int const&):\n /usr/include/c++/10/bits/hashtable.h:392\n \tcmp\tr1, #1\n /usr/include/c++/10/bits/hashtable.h:2064\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/hashtable.h:394\n \titt\teq\n@@ -1604940,17 +1604940,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr5, #126\t@ 0x7e\n \tmovs\tr1, r3\n \tcmp\tr5, #92\t@ 0x5c\n \tmovs\tr1, r3\n-\tuxth\tr6, r3\n+\tuxth\tr6, r4\n \tmovs\tr7, r1\n-\tcbnz\tr0, 31a2f2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17c4be>\n+\tcbnz\tr0, 31a2f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17c4c0>\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n GFFParse::getSequence[abi:cxx11](unsigned int) const:\n ./src/mira/gff_parse.C:155\n@@ -1605073,17 +1605073,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr4, #134\t@ 0x86\n \tmovs\tr1, r3\n \tcmp\tr4, #100\t@ 0x64\n \tmovs\tr1, r3\n-\tsxth\tr6, r1\n+\tsxth\tr6, r2\n \tmovs\tr7, r1\n-\tcbnz\tr0, 31a3bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17c588>\n+\tcbnz\tr0, 31a3be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17c58a>\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n GFFParse::getTags(unsigned int) const:\n ./src/mira/gff_parse.C:174\n@@ -1605206,17 +1605206,17 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr3, #142\t@ 0x8e\n \tmovs\tr1, r3\n \tcmp\tr3, #108\t@ 0x6c\n \tmovs\tr1, r3\n-\tcbz\tr6, 31a4c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17c694>\n+\tcbz\tr6, 31a4ca , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17c696>\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xb854\n+\t\t\t@ instruction: 0xb85c\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n GFFParse::checkTagsOnceLoaded():\n ./src/mira/gff_parse.C:491\n@@ -1606150,71 +1606150,71 @@\n \t...\n \tcmp\tr2, #160\t@ 0xa0\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr2, #128\t@ 0x80\n \tmovs\tr1, r3\n-\t\t\t@ instruction: 0xb7e0\n+\t\t\t@ instruction: 0xb7e8\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xb8ca\n+\t\t\t@ instruction: 0xb8d2\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xb7dc\n+\t\t\t@ instruction: 0xb7e4\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xb770\n+\t\t\t@ instruction: 0xb778\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xb8de\n+\t\t\t@ instruction: 0xb8e6\n \tmovs\tr7, r1\n-\tcbnz\tr0, 31abfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cdc8>\n+\tcbnz\tr0, 31abfe , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cdca>\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xb762\n+\t\t\t@ instruction: 0xb76a\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcbnz\tr4, 31ac56 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17ce22>\n+\tcbnz\tr4, 31ac58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17ce24>\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xfa90000f\n+\t\t\t@ instruction: 0xfa98000f\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb7bc\n+\t\t\t@ instruction: 0xb7c4\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xb77a\n+\t\t\t@ instruction: 0xb782\n \tmovs\tr7, r1\n-\trev16\tr4, r3\n+\trev16\tr4, r4\n \tmovs\tr7, r1\n-\tldrsh.w\tr0, [r0, #15]\n+\tldrsh.w\tr0, [r8, #15]\n \tmovs\tr7, #170\t@ 0xaa\n \tmovs\tr1, r3\n-\tpush\t{r1, r4, r5, r7}\n+\tpush\t{r1, r3, r4, r5, r7}\n \tmovs\tr7, r1\n-\tpush\t{r1, r6, lr}\n+\tpush\t{r1, r3, r6, lr}\n \tmovs\tr7, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr2!, {r5, r6}\n+\tstmia\tr2!, {r2, r3, r5, r6}\n \tmovs\tr4, r1\n-\tstmia\tr2!, {r1, r3, r4, r6}\n+\tstmia\tr2!, {r1, r2, r5, r6}\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r2, r4}\n+\tstmia\tr1!, {r5}\n \tmovs\tr4, r1\n-\tstmia\tr1!, {r1, r2, r3}\n+\tstmia\tr1!, {r1, r3, r4}\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n ./src/mira/gff_parse.C:523 (discriminator 1)\n \tadd\tr4, sp, #40\t@ 0x28\n \tmov\tr0, r4\n \tbl\t31a0f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17c2bc>\n@@ -1606419,25 +1606419,25 @@\n \tb.n\t31adc6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cf92>\n \tb.n\t31add6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cfa2>\n \tb.n\t31ad94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cf60>\n \tb.n\t31adbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cf88>\n /usr/include/c++/10/bits/basic_ios.h:282\n \tb.n\t31adac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cf78>\n \tb.n\t31adac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cf78>\n-\tcbz\tr6, 31ae12 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cfde>\n+\tcbz\tr6, 31ae14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cfe0>\n \tmovs\tr7, r1\n-\tcbz\tr4, 31ae16 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cfe2>\n+\tcbz\tr4, 31ae18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17cfe4>\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xe826000c\n-\t\t\t@ instruction: 0xe822000c\n-\tcdp2\t0, 6, cr0, cr2, cr14, {0}\n+\t\t\t@ instruction: 0xe832000c\n+\t\t\t@ instruction: 0xe82e000c\n+\tcdp2\t0, 6, cr0, cr10, cr14, {0}\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n std::vector, std::allocator >, std::allocator, std::allocator > > >& boost::algorithm::iter_split, std::allocator >, std::allocator, std::allocator > > >, std::__cxx11::basic_string, std::allocator > const&, boost::algorithm::detail::token_finderF > >(std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::__cxx11::basic_string, std::allocator > const&, boost::algorithm::detail::token_finderF >) [clone .isra.0]:\n /usr/include/boost/algorithm/string/iter_find.hpp:147\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n \tldr.w\tr4, [pc, #1524]\t@ 31b408 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17d5d4>\n@@ -1609122,39 +1609122,39 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr0, r7, r6\n \tmovs\tr1, r3\n \tadds\tr2, r4, r6\n \tmovs\tr1, r3\n-\tadd\tr1, sp, #344\t@ 0x158\n+\tadd\tr1, sp, #376\t@ 0x178\n \tmovs\tr7, r1\n-\tadd\tr1, sp, #336\t@ 0x150\n+\tadd\tr1, sp, #368\t@ 0x170\n \tmovs\tr7, r1\n-\tadd\tr4, pc, #520\t@ (adr r4, 31c2fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e4c8>)\n+\tadd\tr4, pc, #552\t@ (adr r4, 31c31c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e4e8>)\n \tmovs\tr7, r1\n-\tldr\tr5, [sp, #456]\t@ 0x1c8\n+\tldr\tr5, [sp, #488]\t@ 0x1e8\n \tmovs\tr7, r1\n-\tadd\tr5, pc, #552\t@ (adr r5, 31c324 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e4f0>)\n+\tadd\tr5, pc, #584\t@ (adr r5, 31c344 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e510>)\n \tmovs\tr5, r1\n-\tadd\tr3, pc, #16\t@ (adr r3, 31c110 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e2dc>)\n+\tadd\tr3, pc, #48\t@ (adr r3, 31c130 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e2fc>)\n \tmovs\tr7, r1\n-\tadd\tr3, pc, #64\t@ (adr r3, 31c144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e310>)\n+\tadd\tr3, pc, #96\t@ (adr r3, 31c164 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e330>)\n \tmovs\tr7, r1\n-\tadd\tr3, pc, #80\t@ (adr r3, 31c158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e324>)\n+\tadd\tr3, pc, #112\t@ (adr r3, 31c178 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e344>)\n \tmovs\tr7, r1\n-\tadd\tr3, pc, #0\t@ (adr r3, 31c10c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e2d8>)\n+\tadd\tr3, pc, #32\t@ (adr r3, 31c12c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e2f8>)\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #816\t@ (adr r0, 31c448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e614>)\n+\tadd\tr0, pc, #848\t@ (adr r0, 31c468 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e634>)\n \tmovs\tr7, r1\n-\tldmia\tr3!, {r1, r5}\n+\tldmia\tr3, {r1, r2, r3, r5}\n \tmovs\tr4, r1\n std::vector, std::allocator >, std::allocator, std::allocator > > >& boost::algorithm::iter_split, std::allocator >, std::allocator, std::allocator > > >, std::__cxx11::basic_string, std::allocator >&, boost::algorithm::detail::token_finderF > >(std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::__cxx11::basic_string, std::allocator >&, boost::algorithm::detail::token_finderF >) [clone .isra.0]:\n /usr/include/boost/algorithm/string/iter_find.hpp:147\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n \tldr.w\tr4, [pc, #1524]\t@ 31c718 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17e8e4>\n \tsub\tsp, #284\t@ 0x11c\n@@ -1611351,33 +1611351,33 @@\n \tmovs\tr1, r3\n \tlsrs\tr0, r3, #32\n \tmovs\tr1, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #29\n \tmovs\tr1, r3\n-\tstr\tr7, [sp, #168]\t@ 0xa8\n+\tstr\tr7, [sp, #200]\t@ 0xc8\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #256]\t@ 0x100\n+\tstr\tr6, [sp, #288]\t@ 0x120\n \tmovs\tr7, r1\n-\tstr\tr6, [sp, #488]\t@ 0x1e8\n+\tstr\tr6, [sp, #520]\t@ 0x208\n \tmovs\tr7, r1\n-\tstr\tr6, [sp, #488]\t@ 0x1e8\n+\tstr\tr6, [sp, #520]\t@ 0x208\n \tmovs\tr7, r1\n-\tstr\tr4, [sp, #344]\t@ 0x158\n+\tstr\tr4, [sp, #376]\t@ 0x178\n \tmovs\tr7, r1\n-\tstr\tr4, [sp, #472]\t@ 0x1d8\n+\tstr\tr4, [sp, #504]\t@ 0x1f8\n \tmovs\tr7, r1\n-\tstr\tr4, [sp, #472]\t@ 0x1d8\n+\tstr\tr4, [sp, #504]\t@ 0x1f8\n \tmovs\tr7, r1\n-\tstr\tr4, [sp, #88]\t@ 0x58\n+\tstr\tr4, [sp, #120]\t@ 0x78\n \tmovs\tr7, r1\n-\tstr\tr4, [sp, #64]\t@ 0x40\n+\tstr\tr4, [sp, #96]\t@ 0x60\n \tmovs\tr7, r1\n GFFParse::parseNormalGFFLine(std::__cxx11::basic_string, std::allocator > const&, unsigned long long, std::vector, std::allocator >, std::allocator, std::allocator > > >&):\n ./src/mira/gff_parse.C:199\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr6, [pc, #3072]\t@ 31dc3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x17fe08>\n \tvpush\t{d8}\n@@ -1613040,85 +1613040,85 @@\n \tnop\n \tvqadd.u16\td0, d8, d8\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tvqadd.u8\td0, d12, d8\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr4, [r4, #62]\t@ 0x3e\n+\tldrh\tr4, [r5, #62]\t@ 0x3e\n \tmovs\tr7, r1\n-\tldrh\tr4, [r1, #62]\t@ 0x3e\n+\tldrh\tr4, [r2, #62]\t@ 0x3e\n \tmovs\tr7, r1\n-\tldrh\tr4, [r0, #62]\t@ 0x3e\n+\tldrh\tr4, [r1, #62]\t@ 0x3e\n \tmovs\tr7, r1\n \tmcr2\t0, 1, r0, cr8, cr8, {0}\n-\tpush\t{r2, r3, r5, r7}\n+\tpush\t{r2, r4, r5, r7}\n \tmovs\tr5, r1\n \tasrs\tr0, r5, #1\n \tmovs\tr0, r0\n-\tadds\tr3, #62\t@ 0x3e\n+\tadds\tr3, #70\t@ 0x46\n \tmovs\tr6, r1\n-\tldrh\tr2, [r3, #52]\t@ 0x34\n+\tldrh\tr2, [r4, #52]\t@ 0x34\n \tmovs\tr7, r1\n-\tldrh\tr0, [r5, #58]\t@ 0x3a\n+\tldrh\tr0, [r6, #58]\t@ 0x3a\n \tmovs\tr7, r1\n-\tldrh\tr4, [r0, #50]\t@ 0x32\n+\tldrh\tr4, [r1, #50]\t@ 0x32\n \tmovs\tr7, r1\n-\tldrh\tr0, [r5, #60]\t@ 0x3c\n+\tldrh\tr0, [r6, #60]\t@ 0x3c\n \tmovs\tr7, r1\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsls\tr0, r7, #30\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tsmlsdx\tr0, ip, r8, r0\n-\tldrh\tr4, [r6, #44]\t@ 0x2c\n+\tldrh\tr4, [r7, #44]\t@ 0x2c\n \tmovs\tr7, r1\n-\tlsrs\tr0, r1, #5\n+\tlsrs\tr0, r2, #5\n \tmovs\tr6, r1\n-\tldrh\tr4, [r3, #20]\n+\tldrh\tr4, [r4, #20]\n \tmovs\tr7, r1\n-\tldrh\tr6, [r0, #34]\t@ 0x22\n+\tldrh\tr6, [r1, #34]\t@ 0x22\n \tmovs\tr7, r1\n-\tldr\tr2, [pc, #712]\t@ (31df64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180130>)\n+\tldr\tr2, [pc, #744]\t@ (31df84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180150>)\n \tmovs\tr6, r1\n-\tcmp\tr6, #40\t@ 0x28\n+\tcmp\tr6, #48\t@ 0x30\n \tmovs\tr6, r1\n \tlsrs\tr4, r6, #3\n \tmovs\tr0, r0\n-\tldrh\tr6, [r7, #8]\n+\tldrh\tr6, [r0, #10]\n \tmovs\tr7, r1\n-\tldrh\tr2, [r2, #10]\n+\tldrh\tr2, [r3, #10]\n \tmovs\tr7, r1\n-\tldrh\tr0, [r3, #10]\n+\tldrh\tr0, [r4, #10]\n \tmovs\tr7, r1\n-\tldrh\tr0, [r4, #6]\n+\tldrh\tr0, [r5, #6]\n \tmovs\tr7, r1\n-\tldrh\tr4, [r2, #10]\n+\tldrh\tr4, [r3, #10]\n \tmovs\tr7, r1\n-\tldrh\tr2, [r7, #6]\n+\tldrh\tr2, [r0, #8]\n \tmovs\tr7, r1\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n-\tldrh\tr6, [r0, #8]\n+\tldrh\tr6, [r1, #8]\n \tmovs\tr7, r1\n \tlsls\tr4, r1, #27\n \tmovs\tr0, r0\n-\tstrh\tr6, [r1, #44]\t@ 0x2c\n+\tstrh\tr6, [r2, #44]\t@ 0x2c\n \tmovs\tr7, r1\n-\tstrh\tr0, [r4, #48]\t@ 0x30\n+\tstrh\tr0, [r5, #48]\t@ 0x30\n \tmovs\tr7, r1\n-\tstrh\tr6, [r4, #48]\t@ 0x30\n+\tstrh\tr6, [r5, #48]\t@ 0x30\n \tmovs\tr7, r1\n-\tadd\tr4, sp, #856\t@ 0x358\n+\tadd\tr4, sp, #888\t@ 0x378\n \tmovs\tr5, r1\n-\tstrb\tr2, [r7, #29]\n+\tstrb\tr2, [r0, #30]\n \tmovs\tr7, r1\n-\tldrh\tr2, [r3, #4]\n+\tldrh\tr2, [r4, #4]\n \tmovs\tr7, r1\n \tlsrs\tr0, r3, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1613469,34 +1613469,34 @@\n \tadds\tr1, #1\n \tblx\tb538 \n ./src/mira/../../src/mira/multitag.H:179\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t31df24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1800f0>\n \tb.n\t31df66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180132>\n-\tstrh\tr4, [r5, #44]\t@ 0x2c\n+\tstrh\tr4, [r6, #44]\t@ 0x2c\n \tmovs\tr7, r1\n-\tmovs\tr7, #168\t@ 0xa8\n+\tmovs\tr7, #176\t@ 0xb0\n \tmovs\tr6, r1\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf4cc000e\n+\t\t\t@ instruction: 0xf4d4000e\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr4, [r2, #20]\n+\tstrh\tr4, [r3, #20]\n \tmovs\tr7, r1\n-\tstrh\tr2, [r5, #28]\n+\tstrh\tr2, [r6, #28]\n \tmovs\tr7, r1\n-\tcmp\tr0, r5\n+\tcmp\tr0, r6\n \tmovs\tr6, r1\n \tldrb\tr2, [r4, #29]\n \tmovs\tr4, r1\n-\tadd\tr4, sp, #376\t@ 0x178\n+\tadd\tr4, sp, #424\t@ 0x1a8\n \tmovs\tr4, r1\n-\tadd\tr4, sp, #344\t@ 0x158\n+\tadd\tr4, sp, #392\t@ 0x188\n \tmovs\tr4, r1\n \tldrb\tr2, [r1, #29]\n \tmovs\tr4, r1\n \tldrb\tr2, [r0, #29]\n \tmovs\tr4, r1\n \tldrb\tr2, [r7, #28]\n \tmovs\tr4, r1\n@@ -1613910,31 +1613910,31 @@\n \tvshr.s16\td0, d8, #16\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tstrh\tr6, [r6, #16]\n+\tstrh\tr6, [r7, #16]\n \tmovs\tr7, r1\n-\tmovs\tr3, #228\t@ 0xe4\n+\tmovs\tr3, #236\t@ 0xec\n \tmovs\tr6, r1\n-\tbvs.n\t31e2b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18047c>\n+\tbvs.n\t31e2c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18048c>\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr0, r2, #21\n+\tlsrs\tr4, r3, #21\n \tmovs\tr5, r1\n-\tmovs\tr2, #24\n+\tmovs\tr2, #32\n \tmovs\tr6, r1\n-\tbpl.n\t31e334 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180500>\n+\tbpl.n\t31e344 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180510>\n \tmovs\tr6, r1\n-\tlsrs\tr4, r1, #18\n+\tlsrs\tr0, r3, #18\n \tmovs\tr5, r1\n \tmov\tr1, r9\n \tmov\tr0, r4\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n ./src/mira/../../src/util/progressindic.H:121\n \tcmp\tr7, fp\n \tbeq.n\t31e376 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180542>\n@@ -1614635,46 +1614635,46 @@\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n \tb.n\t31e68c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180858>\n \tnop\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tstrh\tr2, [r3, #0]\n+\tstrh\tr2, [r4, #0]\n \tmovs\tr7, r1\n-\tldrb\tr2, [r4, #31]\n+\tldrb\tr2, [r5, #31]\n \tmovs\tr7, r1\n-\tldrb\tr6, [r2, #31]\n+\tldrb\tr6, [r3, #31]\n \tmovs\tr7, r1\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \teors.w\tr0, r4, r8, lsr #32\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr4, [r4, #29]\n+\tldrb\tr4, [r5, #29]\n \tmovs\tr7, r1\n-\tbcs.n\t31e798 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180964>\n+\tbcs.n\t31e7a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180974>\n \tmovs\tr6, r1\n-\tsubs\tr4, r4, #6\n+\tsubs\tr4, r5, #6\n \tmovs\tr6, r1\n-\tbcs.n\t31e794 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180960>\n+\tbcs.n\t31e7a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x180970>\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsrs\tr2, r7, #5\n+\tlsrs\tr6, r0, #6\n \tmovs\tr5, r1\n-\tldrb\tr4, [r3, #22]\n+\tldrb\tr4, [r4, #22]\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr6, r5, #3\n+\tlsrs\tr2, r7, #3\n \tmovs\tr5, r1\n-\tlsls\tr2, r7, #28\n+\tlsls\tr6, r0, #29\n \tmovs\tr5, r1\n ./src/mira/gff_parse.C:444\n \tadd.w\tsl, sp, #116\t@ 0x74\n /usr/include/boost/algorithm/string/detail/classification.hpp:40\n \tadd\tr3, sp, #124\t@ 0x7c\n ./src/mira/gff_parse.C:444\n \tmov\tr0, sl\n@@ -1616035,54 +1616035,54 @@\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t31f10e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1812da>\n \tb.n\t31f26e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18143a>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t31f23e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18140a>\n \tb.n\t31f24e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18141a>\n-\tlsls\tr0, r6, #15\n+\tlsls\tr4, r7, #15\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r0, #24]\n+\tstrb\tr4, [r1, #24]\n \tmovs\tr7, r1\n-\tbic.w\tr0, ip, #13\n-\tstrb\tr4, [r2, #22]\n+\tbics.w\tr0, r4, #13\n+\tstrb\tr4, [r3, #22]\n \tmovs\tr7, r1\n-\tstrb\tr6, [r4, #19]\n+\tstrb\tr6, [r5, #19]\n \tmovs\tr7, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrb\tr2, [r1, #19]\n+\tstrb\tr2, [r2, #19]\n \tmovs\tr7, r1\n-\tstr\tr7, [sp, #408]\t@ 0x198\n+\tstr\tr7, [sp, #440]\t@ 0x1b8\n \tmovs\tr5, r1\n-\tstrb\tr0, [r7, #16]\n+\tstrb\tr0, [r0, #17]\n \tmovs\tr7, r1\n-\tstrb\tr2, [r3, #15]\n+\tstrb\tr2, [r4, #15]\n \tmovs\tr7, r1\n-\tstrb\tr2, [r5, #13]\n+\tstrb\tr2, [r6, #13]\n \tmovs\tr7, r1\n-\tstrb\tr6, [r2, #16]\n+\tstrb\tr6, [r3, #16]\n \tmovs\tr7, r1\n-\tstrb\tr6, [r0, #17]\n+\tstrb\tr6, [r1, #17]\n \tmovs\tr7, r1\n-\tstrb\tr6, [r5, #11]\n+\tstrb\tr6, [r6, #11]\n \tmovs\tr7, r1\n-\tstrb\tr6, [r1, #10]\n+\tstrb\tr6, [r2, #10]\n \tmovs\tr7, r1\n-\tstrb\tr6, [r6, #9]\n+\tstrb\tr6, [r7, #9]\n \tmovs\tr7, r1\n-\tadd\tr1, pc, #528\t@ (adr r1, 31f4dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1816a8>)\n+\tadd\tr1, pc, #560\t@ (adr r1, 31f4fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1816c8>)\n \tmovs\tr5, r1\n-\tadd\tr1, pc, #616\t@ (adr r1, 31f538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x181704>)\n+\tadd\tr1, pc, #648\t@ (adr r1, 31f558 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x181724>)\n \tmovs\tr5, r1\n GFFParse::extractKeytag(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/gff_parse.C:802\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr6, [pc, #1240]\t@ 31f7b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18197c>\n \tldr.w\tr4, [pc, #1240]\t@ 31f7b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x181980>\n@@ -1616788,33 +1616788,33 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r1, #19\n \tmovs\tr0, r0\n \tbgt.n\t31f7f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1819bc>\n \tmovs\tr0, r3\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tldr\tr4, [r6, #104]\t@ 0x68\n+\tldr\tr4, [r7, #104]\t@ 0x68\n \tmovs\tr7, r1\n-\tldr\tr0, [r3, #104]\t@ 0x68\n+\tldr\tr0, [r4, #104]\t@ 0x68\n \tmovs\tr7, r1\n-\tcmp\tlr, lr\n+\tcmp\tlr, pc\n \tmovs\tr6, r1\n-\tadds\tr6, #4\n+\tadds\tr6, #12\n \tmovs\tr6, r1\n-\tadds\tr6, #46\t@ 0x2e\n+\tadds\tr6, #54\t@ 0x36\n \tmovs\tr6, r1\n-\tadds\tr4, #66\t@ 0x42\n+\tadds\tr4, #74\t@ 0x4a\n \tmovs\tr6, r1\n-\tcmp\tr4, #200\t@ 0xc8\n+\tcmp\tr4, #208\t@ 0xd0\n \tmovs\tr6, r1\n-\tcmp\tr4, #242\t@ 0xf2\n+\tcmp\tr4, #250\t@ 0xfa\n \tmovs\tr6, r1\n-\tstr\tr3, [sp, #824]\t@ 0x338\n+\tstr\tr3, [sp, #872]\t@ 0x368\n \tmovs\tr4, r1\n-\tstr\tr3, [sp, #792]\t@ 0x318\n+\tstr\tr3, [sp, #840]\t@ 0x348\n \tmovs\tr4, r1\n GFFParse::extractCommonName(std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/gff_parse.C:762\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr4, [pc, #2216]\t@ 3200a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18226c>\n \tldr.w\tr3, [pc, #2216]\t@ 3200a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x182270>\n@@ -1618152,59 +1618152,59 @@\n \tmovs\tr3, r3\n \tadds\tr1, #4\n \tmovs\tr3, r3\n \tadds\tr0, #138\t@ 0x8a\n \tmovs\tr3, r3\n \tbpl.n\t3200b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x182280>\n \tmovs\tr0, r3\n-\tldr\tr4, [r2, #32]\n+\tldr\tr4, [r3, #32]\n \tmovs\tr7, r1\n-\tstrb\tr4, [r3, #7]\n+\tstrb\tr4, [r4, #7]\n \tmovs\tr6, r1\n \tcmp\tr6, #146\t@ 0x92\n \tmovs\tr3, r3\n \tcmp\tr6, #90\t@ 0x5a\n \tmovs\tr3, r3\n \tlsls\tr0, r2, #26\n \tmovs\tr0, r0\n \tb.n\t31fa74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x181c40>\n \tmovs\tr0, r3\n-\tldr\tr0, [r4, #0]\n+\tldr\tr0, [r5, #0]\n \tmovs\tr7, r1\n \tcmp\tr4, #242\t@ 0xf2\n \tmovs\tr3, r3\n \tlsls\tr4, r4, #22\n \tmovs\tr0, r0\n \tb.n\t3207b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x182980>\n \tmovs\tr0, r3\n \tcmp\tr4, #196\t@ 0xc4\n \tmovs\tr3, r3\n \tcmp\tr4, #150\t@ 0x96\n \tmovs\tr3, r3\n-\tstr\tr0, [r2, #104]\t@ 0x68\n+\tstr\tr0, [r3, #104]\t@ 0x68\n \tmovs\tr7, r1\n \tcmp\tr3, #64\t@ 0x40\n \tmovs\tr3, r3\n \tcmp\tr3, #16\n \tmovs\tr3, r3\n \tb.n\t32040c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1825d8>\n \tmovs\tr0, r3\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tcmp\tr3, #248\t@ 0xf8\n+\tcmp\tr4, #0\n \tmovs\tr6, r1\n-\tmovs\tr4, #126\t@ 0x7e\n+\tmovs\tr4, #134\t@ 0x86\n \tmovs\tr6, r1\n-\tmovs\tr4, #168\t@ 0xa8\n+\tmovs\tr4, #176\t@ 0xb0\n \tmovs\tr6, r1\n-\tsubs\tr5, #132\t@ 0x84\n+\tsubs\tr5, #140\t@ 0x8c\n \tmovs\tr6, r1\n-\tcmp\tr5, #146\t@ 0x92\n+\tcmp\tr5, #154\t@ 0x9a\n \tmovs\tr6, r1\n-\tcmp\tr5, #188\t@ 0xbc\n+\tcmp\tr5, #196\t@ 0xc4\n \tmovs\tr6, r1\n \tcmp\tr1, #188\t@ 0xbc\n \tmovs\tr3, r3\n \tcmp\tr1, #176\t@ 0xb0\n \tmovs\tr3, r3\n \tcmp\tr1, #140\t@ 0x8c\n \tmovs\tr3, r3\n@@ -1619156,15 +1619156,15 @@\n \tmovt\tr5, #32767\t@ 0x7fff\n \tb.n\t32077e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18294a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (3207d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1829a4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tstr\tr4, [r2, #68]\t@ 0x44\n+\tstr\tr0, [r4, #68]\t@ 0x44\n \tmovs\tr4, r1\n multitag_t* std::__uninitialized_default_n_1::__uninit_default_n(multitag_t*, unsigned int):\n /usr/include/c++/10/bits/stl_uninitialized.h:561\n \tldr\tr2, [pc, #328]\t@ (320928 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x182af4>)\n \tldr\tr3, [pc, #332]\t@ (32092c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x182af8>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1619603,15 +1619603,15 @@\n \tmov\tr0, r7\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t320b5e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x182d2a>\n /usr/include/c++/10/bits/vector.tcc:643\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tldrh\tr4, [r7, #14]\n+\tldrh\tr0, [r1, #16]\n \tmovs\tr4, r1\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n GFFSave::open(char const*):\n ./src/mira/gff_save.C:85\n \tldr\tr2, [pc, #820]\t@ (320eb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183084>)\n \tldr\tr3, [pc, #824]\t@ (320ebc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183088>)\n@@ -1620060,41 +1620060,41 @@\n \t...\n \tstmia\tr3!, {r2, r3, r4, r6, r7}\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr3!, {r1, r3, r6, r7}\n \tmovs\tr0, r3\n-\tldr\tr2, [r4, r2]\n+\tldr\tr2, [r5, r2]\n \tmovs\tr7, r1\n-\tldr\tr0, [r0, r2]\n+\tldr\tr0, [r1, r2]\n \tmovs\tr7, r1\n \tstmia\tr2!, {r2, r3, r4, r5, r7}\n \tmovs\tr0, r3\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrsb\tr4, [r4, r3]\n+\tldrsb\tr4, [r5, r3]\n \tmovs\tr7, r1\n-\tldrsb\tr4, [r7, r3]\n+\tldrsb\tr4, [r0, r4]\n \tmovs\tr7, r1\n-\tldrsb\tr6, [r2, r3]\n+\tldrsb\tr6, [r3, r3]\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr4, [r4, #19]\n+\tldrb\tr0, [r6, #19]\n \tmovs\tr4, r1\n \tldr\tr7, [pc, #864]\t@ (321260 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18342c>)\n \tmovs\tr4, r1\n \tldr\tr7, [pc, #832]\t@ (321244 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183410>)\n \tmovs\tr4, r1\n GFFSave::zeroVars():\n ./src/mira/gff_save.C:49\n@@ -1620451,15 +1620451,15 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tstmia\tr0!, {r3, r4, r6}\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr0!, {r1, r6}\n \tmovs\tr0, r3\n-\tstr\tr4, [r3, #12]\n+\tstr\tr4, [r4, #12]\n \tmovs\tr6, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n@@ -1621508,45 +1621508,45 @@\n \t...\n \tpop\t{r3, r5, r6}\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tpop\t{r1, r4, r6}\n \tmovs\tr0, r3\n-\tstrh\tr6, [r1, r1]\n+\tstrh\tr6, [r2, r1]\n \tmovs\tr7, r1\n-\tstr\tr2, [r7, #64]\t@ 0x40\n+\tstr\tr2, [r0, #68]\t@ 0x44\n \tmovs\tr6, r1\n-\tstr\tr2, [r5, #64]\t@ 0x40\n+\tstr\tr2, [r6, #64]\t@ 0x40\n \tmovs\tr6, r1\n \tcbnz\tr6, 321a28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183bf4>\n \tmovs\tr0, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #544]\t@ (321c34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183e00>)\n+\tldr\tr5, [pc, #576]\t@ (321c54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183e20>)\n \tmovs\tr7, r1\n-\tldr\tr5, [pc, #568]\t@ (321c50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183e1c>)\n+\tldr\tr5, [pc, #600]\t@ (321c70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183e3c>)\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #896]\t@ (321da4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183f70>)\n+\tldr\tr4, [pc, #928]\t@ (321dc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183f90>)\n \tmovs\tr7, r1\n-\tmovs\tr3, #154\t@ 0x9a\n+\tmovs\tr3, #162\t@ 0xa2\n \tmovs\tr0, r2\n-\tldr\tr4, [pc, #512]\t@ (321c2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183df8>)\n+\tldr\tr4, [pc, #544]\t@ (321c4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x183e18>)\n \tmovs\tr7, r1\n GFFSave::discard():\n ./src/mira/gff_save.C:75\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/fstream:266\n \tadds\tr0, #84\t@ 0x54\n@@ -1623313,53 +1623313,53 @@\n \tmovs\tr0, r0\n \tcbz\tr4, 32276e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18493a>\n \tmovs\tr0, r3\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #32\n \tmovs\tr0, r0\n-\tldrsh\tr4, [r1, r3]\n+\tldrsh\tr4, [r2, r3]\n \tmovs\tr5, r1\n \tadd\tr5, sp, #920\t@ 0x398\n \tmovs\tr0, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tcmn\tr4, r1\n+\tcmn\tr4, r2\n \tmovs\tr7, r1\n-\tadcs\tr6, r0\n+\tadcs\tr6, r1\n \tmovs\tr7, r1\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\teors\tr4, r0\n+\teors\tr4, r1\n \tmovs\tr7, r1\n-\tands\tr4, r6\n+\tands\tr4, r7\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [r7, #80]\t@ 0x50\n+\tstr\tr2, [r1, #84]\t@ 0x54\n \tmovs\tr4, r1\n \tsubs\tr0, #46\t@ 0x2e\n \tmovs\tr4, r1\n \tsubs\tr0, #34\t@ 0x22\n \tmovs\tr4, r1\n \tsubs\tr0, #26\n \tmovs\tr4, r1\n-\tstr\tr6, [r2, #80]\t@ 0x50\n+\tstr\tr2, [r4, #80]\t@ 0x50\n \tmovs\tr4, r1\n GFFSave::acquireRead(Read&):\n ./src/mira/gff_save.C:255\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r0\n \tldr.w\tr2, [pc, #1784]\t@ 322e80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18504c>\n \tvpush\t{d8}\n@@ -1624307,25 +1624307,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr1, #202\t@ 0xca\n+\tsubs\tr1, #210\t@ 0xd2\n \tmovs\tr7, r1\n-\tsubs\tr2, #10\n+\tsubs\tr2, #18\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr7, #26\n+\tsubs\tr7, #38\t@ 0x26\n \tmovs\tr4, r1\n-\tsubs\tr7, #24\n+\tsubs\tr7, #36\t@ 0x24\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tadds\tr0, #106\t@ 0x6a\n \tmovs\tr4, r1\n@@ -1624501,15 +1624501,15 @@\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t322fe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1851ac>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (323000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1851cc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tsubs\tr4, #44\t@ 0x2c\n+\tsubs\tr4, #56\t@ 0x38\n \tmovs\tr4, r1\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n void std::__adjust_heap(char*, int, int, char, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.0]:\n /usr/include/c++/10/bits/stl_heap.h:223\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/stl_heap.h:228\n@@ -1626492,25 +1626492,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr2, #0\n+\tcmp\tr2, #8\n \tmovs\tr7, r1\n-\tcmp\tr1, #232\t@ 0xe8\n+\tcmp\tr1, #240\t@ 0xf0\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr1, #150\t@ 0x96\n+\tcmp\tr1, #158\t@ 0x9e\n \tmovs\tr7, r1\n-\tcmp\tr0, #250\t@ 0xfa\n+\tcmp\tr1, #2\n \tmovs\tr7, r1\n MAFParse::checkCorrectFileEnd():\n ./src/mira/maf_parse.C:248\n \tldr\tr2, [pc, #632]\t@ (3240e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1862ac>)\n \tldr\tr3, [pc, #636]\t@ (3240e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1862b0>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -1626841,43 +1626841,43 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [sp, #920]\t@ 0x398\n \tmovs\tr0, r3\n \tstr\tr0, [sp, #792]\t@ 0x318\n \tmovs\tr0, r3\n-\tcmp\tr0, #38\t@ 0x26\n+\tcmp\tr0, #46\t@ 0x2e\n \tmovs\tr7, r1\n-\tcmp\tr0, #68\t@ 0x44\n+\tcmp\tr0, #76\t@ 0x4c\n \tmovs\tr7, r1\n-\tcmp\tr0, #50\t@ 0x32\n+\tcmp\tr0, #58\t@ 0x3a\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr0, #106\t@ 0x6a\n+\tcmp\tr0, #114\t@ 0x72\n \tmovs\tr7, r1\n-\tmovs\tr7, #208\t@ 0xd0\n+\tmovs\tr7, #216\t@ 0xd8\n \tmovs\tr7, r1\n-\tmovs\tr7, #188\t@ 0xbc\n+\tmovs\tr7, #196\t@ 0xc4\n \tmovs\tr7, r1\n-\tmovs\tr7, #218\t@ 0xda\n+\tmovs\tr7, #226\t@ 0xe2\n \tmovs\tr7, r1\n-\tmovs\tr7, #88\t@ 0x58\n+\tmovs\tr7, #96\t@ 0x60\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr7, #184\t@ 0xb8\n+\tmovs\tr7, #192\t@ 0xc0\n \tmovs\tr7, r1\n-\tmovs\tr7, #174\t@ 0xae\n+\tmovs\tr7, #182\t@ 0xb6\n \tmovs\tr7, r1\n-\tmovs\tr7, #166\t@ 0xa6\n+\tmovs\tr7, #174\t@ 0xae\n \tmovs\tr7, r1\n-\tmovs\tr6, #170\t@ 0xaa\n+\tmovs\tr6, #178\t@ 0xb2\n \tmovs\tr7, r1\n MAFParse::checkParseIsInReadGroup(std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:567\n \tldr\tr2, [pc, #212]\t@ (324204 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1863d0>)\n \tldr\tr3, [pc, #216]\t@ (324208 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1863d4>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, lr}\n@@ -1626997,19 +1626997,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr2, [r4, #48]\t@ 0x30\n \tmovs\tr0, r3\n \tldrh\tr2, [r2, #48]\t@ 0x30\n \tmovs\tr0, r3\n-\tmovs\tr6, #182\t@ 0xb6\n+\tmovs\tr6, #190\t@ 0xbe\n \tmovs\tr7, r1\n-\tmovs\tr6, #180\t@ 0xb4\n+\tmovs\tr6, #188\t@ 0xbc\n \tmovs\tr7, r1\n-\tmovs\tr6, #194\t@ 0xc2\n+\tmovs\tr6, #202\t@ 0xca\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::checkParseIsNotInReadGroup(std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:576\n@@ -1627133,19 +1627133,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r4, #40]\t@ 0x28\n \tmovs\tr0, r3\n \tldrh\tr6, [r2, #40]\t@ 0x28\n \tmovs\tr0, r3\n-\tmovs\tr5, #186\t@ 0xba\n+\tmovs\tr5, #194\t@ 0xc2\n \tmovs\tr7, r1\n-\tmovs\tr6, #48\t@ 0x30\n+\tmovs\tr6, #56\t@ 0x38\n \tmovs\tr7, r1\n-\tmovs\tr6, #62\t@ 0x3e\n+\tmovs\tr6, #70\t@ 0x46\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::checkParseIsInRead(std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:585\n@@ -1627269,19 +1627269,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr2, [r5, #32]\n \tmovs\tr0, r3\n \tldrh\tr2, [r3, #32]\n \tmovs\tr0, r3\n-\tmovs\tr4, #190\t@ 0xbe\n+\tmovs\tr4, #198\t@ 0xc6\n \tmovs\tr7, r1\n-\tmovs\tr5, #176\t@ 0xb0\n+\tmovs\tr5, #184\t@ 0xb8\n \tmovs\tr7, r1\n-\tmovs\tr5, #178\t@ 0xb2\n+\tmovs\tr5, #186\t@ 0xba\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::checkParseIsNotInRead(std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:594\n@@ -1627405,19 +1627405,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r5, #24]\n \tmovs\tr0, r3\n \tldrh\tr6, [r3, #24]\n \tmovs\tr0, r3\n-\tmovs\tr3, #194\t@ 0xc2\n+\tmovs\tr3, #202\t@ 0xca\n \tmovs\tr7, r1\n-\tmovs\tr5, #28\n+\tmovs\tr5, #36\t@ 0x24\n \tmovs\tr7, r1\n-\tmovs\tr5, #30\n+\tmovs\tr5, #38\t@ 0x26\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::checkParseIsInContig(std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:603\n@@ -1627605,29 +1627605,29 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr0, [r6, #16]\n \tmovs\tr0, r3\n \tldrh\tr0, [r3, #16]\n \tmovs\tr0, r3\n-\tmovs\tr2, #190\t@ 0xbe\n+\tmovs\tr2, #198\t@ 0xc6\n \tmovs\tr7, r1\n-\tmovs\tr4, #132\t@ 0x84\n+\tmovs\tr4, #140\t@ 0x8c\n \tmovs\tr7, r1\n-\tmovs\tr4, #138\t@ 0x8a\n+\tmovs\tr4, #146\t@ 0x92\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmovs\tr2, #76\t@ 0x4c\n+\tmovs\tr2, #84\t@ 0x54\n \tmovs\tr7, r1\n-\tmovs\tr4, #126\t@ 0x7e\n+\tmovs\tr4, #134\t@ 0x86\n \tmovs\tr7, r1\n-\tmovs\tr4, #24\n+\tmovs\tr4, #32\n \tmovs\tr7, r1\n MAFParse::parseLineNR(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1186\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n ./src/mira/maf_parse.C:1187\n \tbl\t32451c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1866e8>\n@@ -1628035,23 +1628035,23 @@\n \tmovs\tr0, r0\n \tldrh\tr6, [r0, #2]\n \tmovs\tr0, r3\n \tstrh\tr0, [r4, #58]\t@ 0x3a\n \tmovs\tr0, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovs\tr1, #236\t@ 0xec\n+\tmovs\tr1, #244\t@ 0xf4\n \tmovs\tr7, r1\n-\tmovs\tr1, #226\t@ 0xe2\n+\tmovs\tr1, #234\t@ 0xea\n \tmovs\tr7, r1\n-\tmovs\tr1, #216\t@ 0xd8\n+\tmovs\tr1, #224\t@ 0xe0\n \tmovs\tr7, r1\n-\tmovs\tr1, #106\t@ 0x6a\n+\tmovs\tr1, #114\t@ 0x72\n \tmovs\tr7, r1\n-\tmovs\tr1, #102\t@ 0x66\n+\tmovs\tr1, #110\t@ 0x6e\n \tmovs\tr7, r1\n MAFParse::parseLineCO(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1129\n \tldr\tr2, [pc, #304]\t@ (324adc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x186ca8>)\n \tldr\tr3, [pc, #308]\t@ (324ae0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x186cac>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, lr}\n@@ -1628224,17 +1628224,17 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr6, [r4, #44]\t@ 0x2c\n \tmovs\tr0, r3\n \tstrh\tr0, [r4, #40]\t@ 0x28\n \tmovs\tr0, r3\n-\tmovs\tr0, #196\t@ 0xc4\n+\tmovs\tr0, #204\t@ 0xcc\n \tmovs\tr7, r1\n-\tmovs\tr0, #210\t@ 0xd2\n+\tmovs\tr0, #218\t@ 0xda\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineAT(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1218\n@@ -1628479,25 +1628479,25 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr0, [r7, #32]\n \tmovs\tr0, r3\n \tstrh\tr0, [r4, #28]\n \tmovs\tr0, r3\n-\tsubs\tr6, r0, #7\n+\tsubs\tr6, r1, #7\n \tmovs\tr7, r1\n-\tsubs\tr4, r5, #7\n+\tsubs\tr4, r6, #7\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr6, r7, #7\n+\tmovs\tr0, #6\n \tmovs\tr7, r1\n-\tsubs\tr0, r1, #6\n+\tsubs\tr0, r2, #6\n \tmovs\tr7, r1\n MAFParse::parseLineSN(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1087\n \tldr\tr2, [pc, #220]\t@ (324dd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x186f9c>)\n \tldr\tr3, [pc, #224]\t@ (324dd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x186fa0>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, lr}\n@@ -1628617,19 +1628617,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr6, [r3, #18]\n \tmovs\tr0, r3\n \tstrh\tr6, [r1, #18]\n \tmovs\tr0, r3\n-\tsubs\tr6, r4, r3\n+\tsubs\tr6, r5, r3\n \tmovs\tr7, r1\n-\tsubs\tr0, r3, r7\n+\tsubs\tr0, r4, r7\n \tmovs\tr7, r1\n-\tsubs\tr2, r3, r7\n+\tsubs\tr2, r4, r7\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineSF(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:735\n@@ -1628753,19 +1628753,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr2, [r3, #10]\n \tmovs\tr0, r3\n \tstrh\tr2, [r1, #10]\n \tmovs\tr0, r3\n-\tadds\tr2, r4, r7\n+\tadds\tr2, r5, r7\n \tmovs\tr7, r1\n-\tsubs\tr4, r2, r3\n+\tsubs\tr4, r3, r3\n \tmovs\tr7, r1\n-\tsubs\tr6, r2, r3\n+\tsubs\tr6, r3, r3\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineBC(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:741\n@@ -1628889,19 +1628889,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr6, [r2, #2]\n \tmovs\tr0, r3\n \tstrh\tr6, [r0, #2]\n \tmovs\tr0, r3\n-\tadds\tr6, r3, r3\n+\tadds\tr6, r4, r3\n \tmovs\tr7, r1\n-\tadds\tr0, r2, r7\n+\tadds\tr0, r3, r7\n \tmovs\tr7, r1\n-\tadds\tr2, r2, r7\n+\tadds\tr2, r3, r7\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineSR(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:754\n@@ -1629025,19 +1629025,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r2, #29]\n \tmovs\tr0, r3\n \tldrb\tr2, [r0, #29]\n \tmovs\tr0, r3\n-\tasrs\tr2, r3, #31\n+\tasrs\tr2, r4, #31\n \tmovs\tr7, r1\n-\tadds\tr4, r1, r3\n+\tadds\tr4, r2, r3\n \tmovs\tr7, r1\n-\tadds\tr6, r1, r3\n+\tadds\tr6, r2, r3\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineQR(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:767\n@@ -1629161,19 +1629161,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r1, #25]\n \tmovs\tr0, r3\n \tldrb\tr6, [r7, #24]\n \tmovs\tr0, r3\n-\tasrs\tr6, r2, #27\n+\tasrs\tr6, r3, #27\n \tmovs\tr7, r1\n-\tasrs\tr0, r1, #31\n+\tasrs\tr0, r2, #31\n \tmovs\tr7, r1\n-\tasrs\tr2, r1, #31\n+\tasrs\tr2, r2, #31\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineTN(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:703\n@@ -1629297,19 +1629297,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r1, #21]\n \tmovs\tr0, r3\n \tldrb\tr2, [r7, #20]\n \tmovs\tr0, r3\n-\tasrs\tr2, r2, #23\n+\tasrs\tr2, r3, #23\n \tmovs\tr7, r1\n-\tasrs\tr4, r0, #27\n+\tasrs\tr4, r1, #27\n \tmovs\tr7, r1\n-\tasrs\tr6, r0, #27\n+\tasrs\tr6, r1, #27\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineDI(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:709\n@@ -1629433,19 +1629433,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r0, #17]\n \tmovs\tr0, r3\n \tldrb\tr6, [r6, #16]\n \tmovs\tr0, r3\n-\tasrs\tr6, r1, #19\n+\tasrs\tr6, r2, #19\n \tmovs\tr7, r1\n-\tasrs\tr0, r0, #23\n+\tasrs\tr0, r1, #23\n \tmovs\tr7, r1\n-\tasrs\tr2, r0, #23\n+\tasrs\tr2, r1, #23\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineTF(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:715\n@@ -1629569,19 +1629569,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r0, #13]\n \tmovs\tr0, r3\n \tldrb\tr2, [r6, #12]\n \tmovs\tr0, r3\n-\tasrs\tr2, r1, #15\n+\tasrs\tr2, r2, #15\n \tmovs\tr7, r1\n-\tasrs\tr4, r7, #18\n+\tasrs\tr4, r0, #19\n \tmovs\tr7, r1\n-\tasrs\tr6, r7, #18\n+\tasrs\tr6, r0, #19\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineTT(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:721\n@@ -1629705,19 +1629705,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r7, #8]\n \tmovs\tr0, r3\n \tldrb\tr6, [r5, #8]\n \tmovs\tr0, r3\n-\tasrs\tr6, r0, #11\n+\tasrs\tr6, r1, #11\n \tmovs\tr7, r1\n-\tasrs\tr0, r7, #14\n+\tasrs\tr0, r0, #15\n \tmovs\tr7, r1\n-\tasrs\tr2, r7, #14\n+\tasrs\tr2, r0, #15\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineSV(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:697\n@@ -1629841,19 +1629841,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r7, #4]\n \tmovs\tr0, r3\n \tldrb\tr2, [r5, #4]\n \tmovs\tr0, r3\n-\tasrs\tr2, r0, #7\n+\tasrs\tr2, r1, #7\n \tmovs\tr7, r1\n-\tasrs\tr4, r6, #10\n+\tasrs\tr4, r7, #10\n \tmovs\tr7, r1\n-\tasrs\tr6, r6, #10\n+\tasrs\tr6, r7, #10\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineCR(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:780\n@@ -1629977,19 +1629977,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r6, #0]\n \tmovs\tr0, r3\n \tldrb\tr6, [r4, #0]\n \tmovs\tr0, r3\n-\tasrs\tr6, r7, #2\n+\tasrs\tr6, r0, #3\n \tmovs\tr7, r1\n-\tasrs\tr0, r6, #6\n+\tasrs\tr0, r7, #6\n \tmovs\tr7, r1\n-\tasrs\tr2, r6, #6\n+\tasrs\tr2, r7, #6\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineIB(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1099\n@@ -1630113,19 +1630113,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr2, [r6, #28]\n \tmovs\tr0, r3\n \tstrb\tr2, [r4, #28]\n \tmovs\tr0, r3\n-\tlsrs\tr2, r7, #30\n+\tlsrs\tr2, r0, #31\n \tmovs\tr7, r1\n-\tasrs\tr4, r5, #2\n+\tasrs\tr4, r6, #2\n \tmovs\tr7, r1\n-\tasrs\tr6, r5, #2\n+\tasrs\tr6, r6, #2\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineIC(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1105\n@@ -1630249,19 +1630249,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r5, #24]\n \tmovs\tr0, r3\n \tstrb\tr6, [r3, #24]\n \tmovs\tr0, r3\n-\tlsrs\tr6, r6, #26\n+\tlsrs\tr6, r7, #26\n \tmovs\tr7, r1\n-\tlsrs\tr0, r5, #30\n+\tlsrs\tr0, r6, #30\n \tmovs\tr7, r1\n-\tlsrs\tr2, r5, #30\n+\tlsrs\tr2, r6, #30\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineIR(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1111\n@@ -1630385,19 +1630385,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr2, [r5, #20]\n \tmovs\tr0, r3\n \tstrb\tr2, [r3, #20]\n \tmovs\tr0, r3\n-\tlsrs\tr2, r6, #22\n+\tlsrs\tr2, r7, #22\n \tmovs\tr7, r1\n-\tlsrs\tr4, r4, #26\n+\tlsrs\tr4, r5, #26\n \tmovs\tr7, r1\n-\tlsrs\tr6, r4, #26\n+\tlsrs\tr6, r5, #26\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineMT(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1093\n@@ -1630521,19 +1630521,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r4, #16]\n \tmovs\tr0, r3\n \tstrb\tr6, [r2, #16]\n \tmovs\tr0, r3\n-\tlsrs\tr6, r5, #18\n+\tlsrs\tr6, r6, #18\n \tmovs\tr7, r1\n-\tlsrs\tr0, r4, #22\n+\tlsrs\tr0, r5, #22\n \tmovs\tr7, r1\n-\tlsrs\tr2, r4, #22\n+\tlsrs\tr2, r5, #22\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineTS(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:727\n@@ -1630665,19 +1630665,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr2, [r4, #12]\n \tmovs\tr0, r3\n \tstrb\tr0, [r1, #12]\n \tmovs\tr0, r3\n-\tlsrs\tr6, r4, #14\n+\tlsrs\tr6, r5, #14\n \tmovs\tr7, r1\n-\tlsrs\tr0, r3, #18\n+\tlsrs\tr0, r4, #18\n \tmovs\tr7, r1\n-\tlsrs\tr0, r3, #18\n+\tlsrs\tr0, r4, #18\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineQL(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:760\n@@ -1630808,19 +1630808,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r2, #8]\n \tmovs\tr0, r3\n \tstrb\tr6, [r6, #7]\n \tmovs\tr0, r3\n-\tlsrs\tr4, r2, #10\n+\tlsrs\tr4, r3, #10\n \tmovs\tr7, r1\n-\tlsrs\tr6, r0, #14\n+\tlsrs\tr6, r1, #14\n \tmovs\tr7, r1\n-\tlsrs\tr0, r1, #14\n+\tlsrs\tr0, r2, #14\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineCL(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:773\n@@ -1630951,19 +1630951,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r0, #4]\n \tmovs\tr0, r3\n \tstrb\tr6, [r4, #3]\n \tmovs\tr0, r3\n-\tlsrs\tr4, r0, #6\n+\tlsrs\tr4, r1, #6\n \tmovs\tr7, r1\n-\tlsrs\tr6, r6, #9\n+\tlsrs\tr6, r7, #9\n \tmovs\tr7, r1\n-\tlsrs\tr0, r7, #9\n+\tlsrs\tr0, r0, #10\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineSL(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:747\n@@ -1631094,19 +1631094,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [r6, #124]\t@ 0x7c\n \tmovs\tr0, r3\n \tldr\tr6, [r2, #124]\t@ 0x7c\n \tmovs\tr0, r3\n-\tlsrs\tr4, r6, #1\n+\tlsrs\tr4, r7, #1\n \tmovs\tr7, r1\n-\tlsrs\tr6, r4, #5\n+\tlsrs\tr6, r5, #5\n \tmovs\tr7, r1\n-\tlsrs\tr0, r5, #5\n+\tlsrs\tr0, r6, #5\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineLR(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:690\n@@ -1631268,19 +1631268,19 @@\n \tmovs\tr0, r0\n \tldr\tr2, [r4, #108]\t@ 0x6c\n \tmovs\tr0, r3\n \tldr\tr6, [r5, #104]\t@ 0x68\n \tmovs\tr0, r3\n \tldr\tr4, [r2, #104]\t@ 0x68\n \tmovs\tr0, r3\n-\tlsls\tr4, r5, #28\n+\tlsls\tr4, r6, #28\n \tmovs\tr7, r1\n-\tlsrs\tr6, r3, #32\n+\tlsrs\tr6, r4, #32\n \tmovs\tr7, r1\n-\tlsrs\tr0, r4, #32\n+\tlsrs\tr0, r5, #32\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineRD(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:618\n@@ -1631580,31 +1631580,31 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [r2, #88]\t@ 0x58\n \tmovs\tr0, r3\n \tldr\tr4, [r0, #76]\t@ 0x4c\n \tmovs\tr0, r3\n-\tlsrs\tr6, r0, #7\n+\tlsrs\tr6, r1, #7\n \tmovs\tr7, r1\n-\tlsrs\tr4, r0, #7\n+\tlsrs\tr4, r1, #7\n \tmovs\tr7, r1\n-\tlsrs\tr2, r2, #7\n+\tlsrs\tr2, r3, #7\n \tmovs\tr7, r1\n-\tlsrs\tr4, r0, #7\n+\tlsrs\tr4, r1, #7\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr2, r3, #19\n+\tlsls\tr2, r4, #19\n \tmovs\tr7, r1\n-\tlsls\tr0, r2, #21\n+\tlsls\tr0, r3, #21\n \tmovs\tr7, r1\n-\tlsls\tr6, r3, #21\n+\tlsls\tr6, r4, #21\n \tmovs\tr7, r1\n MAFParse::parseLineST(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1073\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r2\n \tldr\tr2, [pc, #432]\t@ (3265c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188790>)\n \tldr\tr3, [pc, #432]\t@ (3265c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188794>)\n@@ -1631838,33 +1631838,33 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [r0, #52]\t@ 0x34\n \tmovs\tr0, r3\n \tldr\tr2, [r2, #48]\t@ 0x30\n \tmovs\tr0, r3\n-\tlsls\tr6, r6, #14\n+\tlsls\tr6, r7, #14\n \tmovs\tr7, r1\n-\tlsls\tr0, r5, #18\n+\tlsls\tr0, r6, #18\n \tmovs\tr7, r1\n-\tlsls\tr2, r5, #18\n+\tlsls\tr2, r6, #18\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [r1, r1]\n+\tstr\tr6, [r2, r1]\n \tmovs\tr5, r1\n-\tlsrs\tr4, r4, #32\n+\tlsrs\tr4, r5, #32\n \tmovs\tr7, r1\n-\tlsrs\tr2, r3, #32\n+\tlsrs\tr2, r4, #32\n \tmovs\tr7, r1\n-\tlsrs\tr4, r4, #32\n+\tlsrs\tr4, r5, #32\n \tmovs\tr7, r1\n-\tlsls\tr6, r7, #31\n+\tlsrs\tr6, r0, #32\n \tmovs\tr7, r1\n MAFParse::parseLineRG(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:633\n \tldr\tr2, [pc, #904]\t@ (326988 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188b54>)\n \tldr\tr3, [pc, #908]\t@ (32698c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188b58>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1632342,35 +1632342,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsls\tr0, r0, #26\n+\tlsls\tr0, r1, #26\n \tmovs\tr7, r1\n-\tlsls\tr2, r3, #26\n+\tlsls\tr2, r4, #26\n \tmovs\tr7, r1\n-\tlsls\tr4, r7, #25\n+\tlsls\tr4, r0, #26\n \tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr6, r7, #23\n+\tlsls\tr6, r0, #24\n \tmovs\tr7, r1\n-\tlsls\tr4, r7, #23\n+\tlsls\tr4, r0, #24\n \tmovs\tr7, r1\n-\tlsls\tr6, r6, #21\n+\tlsls\tr6, r7, #21\n \tmovs\tr7, r1\n-\tlsls\tr2, r0, #20\n+\tlsls\tr2, r1, #20\n \tmovs\tr7, r1\n-\tlsls\tr0, r0, #20\n+\tlsls\tr0, r1, #20\n \tmovs\tr7, r1\n-\tlsls\tr2, r7, #17\n+\tlsls\tr2, r0, #18\n \tmovs\tr7, r1\n ./src/mira/maf_parse.C:588\n \tadd\tr7, sp, #32\n \tmov\tfp, r1\n \tmov\tr0, r7\n \tbl\t323a70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x185c3c>\n /usr/include/c++/10/ostream:611\n@@ -1632514,17 +1632514,17 @@\n \tb.n\t326a64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188c30>\n \tb.n\t326aca , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188c96>\n /usr/include/c++/10/bits/basic_ios.h:282\n \tmov\tr0, fp\n \tb.n\t326ab2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188c7e>\n \tb.n\t326a5a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x188c26>\n \tnop\n-\tcdp2\t0, 4, cr0, cr0, cr14, {0}\n-\tvhadd.u\td0, d2, d14\n-\tvhadd.u\td0, d4, d14\n+\tcdp2\t0, 4, cr0, cr8, cr14, {0}\n+\tvhadd.u\td0, d10, d14\n+\tvhadd.u\td0, d12, d14\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineRS(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:648\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1632758,20 +1632758,20 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [r0, #68]\t@ 0x44\n \tmovs\tr0, r3\n \tstr\tr4, [r4, #56]\t@ 0x38\n \tmovs\tr0, r3\n-\tmovs\tr0, r2\n+\tmovs\tr4, r3\n \tmovs\tr4, r1\n-\tlsls\tr4, r0, #9\n-\tmovs\tr7, r1\n \tlsls\tr4, r1, #9\n \tmovs\tr7, r1\n+\tlsls\tr4, r2, #9\n+\tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineCS(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1144\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1633005,19 +1633005,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [r7, #36]\t@ 0x24\n \tmovs\tr0, r3\n \tstr\tr4, [r3, #28]\n \tmovs\tr0, r3\n-\tcdp2\t0, 4, cr0, cr8, cr11, {0}\n-\tlsls\tr4, r0, #4\n-\tmovs\tr7, r1\n+\tcdp2\t0, 5, cr0, cr4, cr11, {0}\n \tlsls\tr4, r1, #4\n \tmovs\tr7, r1\n+\tlsls\tr4, r2, #4\n+\tmovs\tr7, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineRQ(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:669\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1633254,17 +1633254,17 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [r6, #8]\n \tmovs\tr0, r3\n \tstr\tr4, [r0, #0]\n \tmovs\tr0, r3\n-\tstc2l\t0, cr0, [lr], #-44\t@ 0xffffffd4\n-\tvswp\td0, d14\n+\tldc2l\t0, cr0, [sl], #-44\t@ 0xffffffd4\n \tvaddl.u\tq0, d10, d14\n+\tvaddl.u8\tq8, d2, d14\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineCQ(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1165\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1633501,17 +1633501,17 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsh\tr0, [r3, r3]\n \tmovs\tr0, r3\n \tldrsh\tr4, [r5, r0]\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xfa96000b\n-\tcdp2\t0, 6, cr0, cr2, cr14, {0}\n+\t\t\t@ instruction: 0xfaa2000b\n \tcdp2\t0, 6, cr0, cr10, cr14, {0}\n+\tcdp2\t0, 7, cr0, cr2, cr14, {0}\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::countElements(std::__cxx11::basic_string, std::allocator > const&, unsigned int&, unsigned int&):\n ./src/mira/maf_parse.C:91\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1634057,29 +1634057,29 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #344]\t@ 0x158\n+\tstr\tr1, [sp, #376]\t@ 0x178\n \tmovs\tr5, r1\n-\tadd\tr0, r8\n+\tadd\tr0, r9\n \tmovs\tr6, r1\n-\tldrb\tr6, [r0, #15]\n+\tldrb\tr2, [r2, #15]\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #152]\t@ 0x98\n+\tstr\tr0, [sp, #184]\t@ 0xb8\n \tmovs\tr5, r1\n-\tldrb\tr4, [r2, #10]\n+\tldrb\tr0, [r4, #10]\n \tmovs\tr4, r1\n-\torrs\tr2, r0\n+\torrs\tr2, r1\n \tmovs\tr6, r1\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldr\tr2, [r6, r6]\n \tmovs\tr0, r3\n@@ -1634377,28 +1634377,28 @@\n \tblx\tb538 \n ./src/mira/maf_parse.C:102 (discriminator 13)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t327888 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x189a54>\n \tb.n\t327928 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x189af4>\n \tnop\n-\tldrb\tr4, [r4, #1]\n+\tldrb\tr0, [r6, #1]\n \tmovs\tr4, r1\n-\tstrb\tr2, [r6, #31]\n+\tstrb\tr6, [r7, #31]\n \tmovs\tr4, r1\n-\tstr??.w\tr0, [r0, #14]\n-\tldrsb.w\tr0, [sl, lr]\n-\tstr.w\tr0, [r8, #14]\n+\tstr??.w\tr0, [r8, #14]\n+\tvld4.8\t{d0-d3}, [r2], lr\n+\tldr.w\tr0, [r0, #14]\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr??.w\tr0, [ip, lr]\n-\tstr??.w\tr0, [r6, lr]\n-\tldr.w\tr0, [r2, lr]\n+\tldr??.w\tr0, [r4, lr]\n+\tstr??.w\tr0, [lr, lr]\n+\tldr.w\tr0, [sl, lr]\n MAFParse::MAFParse(ReadPool*, std::__cxx11::list >*, std::vector >*):\n ./src/mira/maf_parse.C:47\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tfp, r0, #176\t@ 0xb0\n ./src/mira/maf_parse.C:47\n \tmov\tr4, r0\n@@ -1635295,24 +1635295,24 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [r2, r7]\n \tmovs\tr0, r3\n \tstr\tr2, [r4, r3]\n \tmovs\tr0, r3\n-\t\t\t@ instruction: 0xf19c000e\n-\trsbs\tr0, r6, #14\n-\tsubs.w\tr0, r8, #14\n+\tsub.w\tr0, r4, #14\n+\trsbs\tr0, lr, #14\n+\trsb\tr0, r0, #14\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf128000e\n-\t\t\t@ instruction: 0xf122000e\n-\tadc.w\tr0, r4, #14\n+\t\t\t@ instruction: 0xf130000e\n+\t\t\t@ instruction: 0xf12a000e\n+\tadc.w\tr0, ip, #14\n MAFParse::parseLineAO(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:786\n \tldr.w\tr2, [pc, #1464]\t@ 3285e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a7b4>\n \tldr.w\tr3, [pc, #1464]\t@ 3285ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a7b8>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n@@ -1636068,54 +1636068,54 @@\n \tb.n\t3285bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a788>\n \tldr\tr7, [pc, #176]\t@ (32869c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a868>)\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr7, [pc, #112]\t@ (328664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a830>)\n \tmovs\tr0, r3\n-\teors.w\tr0, lr, #14\n-\t\t\t@ instruction: 0xf0aa000e\n-\trev16\tr4, r5\n+\t\t\t@ instruction: 0xf0a6000e\n+\t\t\t@ instruction: 0xf0b2000e\n+\trev16\tr4, r6\n \tmovs\tr7, r1\n-\trev16\tr6, r2\n+\trev16\tr6, r3\n \tmovs\tr7, r1\n-\trev16\tr2, r0\n+\trev16\tr2, r1\n \tmovs\tr7, r1\n-\torn\tr0, ip, #14\n-\tvhadd.s32\td0, d14, d14\n+\torns\tr0, r4, #14\n+\tvhadd.s\td0, d6, d14\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldr\tr4, [pc, #512]\t@ (32881c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a9e8>)\n \tmovs\tr0, r3\n-\tldcl\t0, cr0, [r0, #56]\t@ 0x38\n-\tcdp\t0, 5, cr0, cr14, cr14, {0}\n-\tstcl\t0, cr0, [r8, #56]!\t@ 0x38\n-\tldcl\t0, cr0, [sl, #-56]\t@ 0xffffffc8\n-\tcdp\t0, 4, cr0, cr4, cr14, {0}\n-\t\t\t@ instruction: 0xb85c\n+\tldcl\t0, cr0, [r8, #56]\t@ 0x38\n+\tcdp\t0, 6, cr0, cr6, cr14, {0}\n+\tldcl\t0, cr0, [r0, #56]!\t@ 0x38\n+\tstcl\t0, cr0, [r2, #-56]!\t@ 0xffffffc8\n+\tcdp\t0, 4, cr0, cr12, cr14, {0}\n+\t\t\t@ instruction: 0xb864\n \tmovs\tr7, r1\n-\tcdp\t0, 2, cr0, cr12, cr14, {0}\n-\tb.n\t328700 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a8cc>\n+\tcdp\t0, 3, cr0, cr4, cr14, {0}\n+\tb.n\t328710 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18a8dc>\n \tmovs\tr6, r1\n-\tldc\t0, cr0, [r0, #-56]!\t@ 0xffffffc8\n-\tstc\t0, cr0, [r6], #56\t@ 0x38\n-\tstcl\t0, cr0, [r8, #-56]\t@ 0xffffffc8\n-\t\t\t@ instruction: 0xb7a8\n+\tldc\t0, cr0, [r8, #-56]!\t@ 0xffffffc8\n+\tstc\t0, cr0, [lr], #56\t@ 0x38\n+\tldcl\t0, cr0, [r0, #-56]\t@ 0xffffffc8\n+\t\t\t@ instruction: 0xb7b0\n \tmovs\tr7, r1\n-\tstcl\t0, cr0, [r4, #-56]\t@ 0xffffffc8\n-\t\t\t@ instruction: 0xb780\n+\tstcl\t0, cr0, [ip, #-56]\t@ 0xffffffc8\n+\t\t\t@ instruction: 0xb788\n \tmovs\tr7, r1\n-\tsvc\t160\t@ 0xa0\n+\tsvc\t168\t@ 0xa8\n \tmovs\tr6, r1\n-\tstcl\t0, cr0, [lr], #-56\t@ 0xffffffc8\n-\t\t\t@ instruction: 0xebe0000e\n-\t\t\t@ instruction: 0xebee000e\n-\t\t\t@ instruction: 0xebf8000e\n+\tldcl\t0, cr0, [r6], #-56\t@ 0xffffffc8\n+\t\t\t@ instruction: 0xebe8000e\n+\t\t\t@ instruction: 0xebf6000e\n+\tstc\t0, cr0, [r0], {14}\n MAFParse::checkReadData():\n ./src/mira/maf_parse.C:1319\n \tldr.w\tr2, [pc, #1076]\t@ 328aa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ac6c>\n \tldr.w\tr3, [pc, #1076]\t@ 328aa4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ac70>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r9, lr}\n \tldr.w\tr6, [pc, #1072]\t@ 328aa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ac74>\n@@ -1636699,38 +1636699,38 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpkhbt\tr0, lr, lr\n-\tpkhbt\tr0, sl, lr\n+\t\t\t@ instruction: 0xead6000e\n+\t\t\t@ instruction: 0xead2000e\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr4, [r5, r3]\n+\tstrh\tr0, [r7, r3]\n \tmovs\tr4, r1\n-\teor.w\tr0, sl, lr\n-\t\t\t@ instruction: 0xeab2000e\n-\tblt.n\t328a2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18abf8>\n+\teors.w\tr0, r2, lr\n+\t\t\t@ instruction: 0xeaba000e\n+\tblt.n\t328a3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ac08>\n \tmovs\tr6, r1\n-\tands.w\tr0, r0, lr\n-\tstrh\tr2, [r0, r1]\n+\tands.w\tr0, r8, lr\n+\tstrh\tr6, [r1, r1]\n \tmovs\tr4, r1\n-\torrs.w\tr0, r0, lr\n-\t\t\t@ instruction: 0xe99a000e\n-\tstr\tr4, [r2, r7]\n+\torrs.w\tr0, r8, lr\n+\t\t\t@ instruction: 0xe9a2000e\n+\tstr\tr0, [r4, r7]\n \tmovs\tr4, r1\n-\tldrd\tr0, r0, [r2, #-56]!\t@ 0x38\n-\tstrd\tr0, r0, [lr, #-56]!\t@ 0x38\n-\tbge.n\t328a20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18abec>\n+\tldrd\tr0, r0, [sl, #-56]!\t@ 0x38\n+\tldrd\tr0, r0, [r6, #-56]!\t@ 0x38\n+\tbge.n\t328a30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18abfc>\n \tmovs\tr6, r1\n-\tldrd\tr0, r0, [sl], #56\t@ 0x38\n+\tstmdb\tr2, {r1, r2, r3}\n /usr/include/c++/10/sstream:584\n \tmov\tr0, r4\n /usr/include/c++/10/ostream:93\n \tadd\tr4, sp, #248\t@ 0xf8\n /usr/include/c++/10/sstream:584\n \tbl\t15970 , std::allocator >::~basic_stringbuf()@@Base>\n /usr/include/c++/10/ostream:93\n@@ -1638286,29 +1638286,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr6, r2\n+\tmovs\tr2, r4\n \tmovs\tr4, r1\n-\tmovs\tr2, r2\n+\tmovs\tr6, r3\n \tmovs\tr4, r1\n-\tasrs\tr2, r2, #25\n+\tasrs\tr2, r3, #25\n \tmovs\tr6, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n+\tvhadd.u16\td0, d10, d11\n \tvhadd.u8\td0, d14, d11\n-\tvhadd.u8\td0, d2, d11\n-\tmovs\tr6, #210\t@ 0xd2\n+\tmovs\tr6, #218\t@ 0xda\n \tmovs\tr6, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_construct.h:151\n \tldr\tr0, [sp, #68]\t@ 0x44\n \tldr\tr1, [sp, #56]\t@ 0x38\n \tcmp\tr0, r1\n@@ -1638564,19 +1638564,19 @@\n \tldr\tr1, [sp, #104]\t@ 0x68\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t3299be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bb8a>\n \tnop\n-\tcmp\tr2, r5\n+\tcmp\tr6, r6\n \tmovs\tr4, r1\n-\tblt.n\t329a48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bc14>\n+\tblt.n\t329a58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bc24>\n \tmovs\tr6, r1\n-\tblt.n\t329a90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bc5c>\n+\tblt.n\t329aa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bc6c>\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineER(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1117\n@@ -1638716,19 +1638716,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr5, #50\t@ 0x32\n \tmovs\tr0, r3\n \tadds\tr5, #4\n \tmovs\tr0, r3\n-\tldmia\tr5, {r1, r5, r7}\n+\tldmia\tr5, {r1, r3, r5, r7}\n \tmovs\tr6, r1\n-\tldmia\tr6!, {r2, r4, r7}\n+\tldmia\tr6!, {r2, r3, r4, r7}\n \tmovs\tr6, r1\n-\tldmia\tr6!, {r1, r2, r4, r7}\n+\tldmia\tr6!, {r1, r2, r3, r4, r7}\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseReadGroup(std::basic_ifstream >&, ReadGroupLib::ReadGroupID&, std::vector >&, unsigned long long&):\n ./src/mira/maf_parse.C:1483\n@@ -1639206,15 +1639206,15 @@\n \t...\n \tadds\tr4, #24\n \tmovs\tr0, r3\n \tadds\tr4, #6\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbge.n\t329e84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18c050>\n+\tbge.n\t329e94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18c060>\n \tmovs\tr6, r1\n \tlsls\tr0, r7, #28\n \tmovs\tr0, r0\n /usr/include/boost/range/iterator_range_core.hpp:217\n \tldr\tr2, [sp, #64]\t@ 0x40\n /usr/include/boost/algorithm/string/find_iterator.hpp:265\n \tmov.w\tr8, #0\n@@ -1641142,31 +1641142,31 @@\n \tbge.w\t329b92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bd5e>\n \tldrsb.w\tr4, [ip, #372]\t@ 0x174\n \tcmp\tr4, #0\n \tbne.w\t329b92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bd5e>\n ./src/mira/../../src/mira/readgrouplib.H:356\n \tstrb.w\tr4, [ip, #370]\t@ 0x172\n \tb.w\t329b92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18bd5e>\n-\tbpl.n\t32acb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce80>\n+\tbpl.n\t32acc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce90>\n \tmovs\tr6, r1\n-\tbpl.n\t32aca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce6c>\n+\tbpl.n\t32acb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce7c>\n \tmovs\tr6, r1\n-\tstrb\tr6, [r0, #30]\n+\tstrb\tr6, [r1, #30]\n \tmovs\tr7, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tbcs.n\t32ac40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce0c>\n+\tbcs.n\t32ac50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce1c>\n \tmovs\tr6, r1\n-\tbcs.n\t32ac40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce0c>\n+\tbcs.n\t32ac50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ce1c>\n \tmovs\tr6, r1\n-\tldmia\tr1!, {r4}\n+\tldmia\tr1!, {r3, r4}\n \tmovs\tr5, r1\n-\tbeq.n\t32ac20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18cdec>\n+\tbeq.n\t32ac30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18cdfc>\n \tmovs\tr6, r1\n \tcmp\tr3, #84\t@ 0x54\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1641174,61 +1641174,61 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\torr.w\tr0, r0, #11\n-\tbics.w\tr0, r0, #11\n-\tasrs\tr6, r7, #31\n+\torr.w\tr0, ip, #11\n+\tbics.w\tr0, ip, #11\n+\tadds\tr6, r0, r0\n \tmovs\tr6, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tcdp\t0, 15, cr0, cr4, cr11, {0}\n-\tcdp\t0, 14, cr0, cr4, cr11, {0}\n-\tasrs\tr2, r6, #26\n+\tvhadd.s8\td0, d0, d11\n+\tcdp\t0, 15, cr0, cr0, cr11, {0}\n+\tasrs\tr2, r7, #26\n \tmovs\tr6, r1\n-\tldc\t0, cr0, [r8, #44]\t@ 0x2c\n-\tstc\t0, cr0, [r8, #44]\t@ 0x2c\n-\tasrs\tr6, r2, #21\n+\tstc\t0, cr0, [r4, #44]!\t@ 0x2c\n+\tldc\t0, cr0, [r4, #44]\t@ 0x2c\n+\tasrs\tr6, r3, #21\n \tmovs\tr6, r1\n-\tadds\tr3, #26\n+\tadds\tr3, #34\t@ 0x22\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xebe8000b\n-\trsbs\tr0, sl, fp\n-\tasrs\tr2, r5, #14\n+\t\t\t@ instruction: 0xebf4000b\n+\t\t\t@ instruction: 0xebe6000b\n+\tasrs\tr2, r6, #14\n \tmovs\tr6, r1\n-\tldmia\tr4, {r4, r5, r6}\n+\tldmia\tr4, {r3, r4, r5, r6}\n \tmovs\tr6, r1\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tldmia\tr4!, {r2, r5}\n-\tmovs\tr6, r1\n \tldmia\tr4!, {r2, r3, r5}\n \tmovs\tr6, r1\n-\tldmia\tr3, {r1, r2, r3, r5, r6, r7}\n+\tldmia\tr4, {r2, r4, r5}\n+\tmovs\tr6, r1\n+\tldmia\tr3!, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr6, r1\n-\tldmia\tr4!, {r2, r3}\n+\tldmia\tr4, {r2, r4}\n \tmovs\tr6, r1\n-\tldmia\tr2!, {r1, r5}\n+\tldmia\tr2!, {r1, r3, r5}\n \tmovs\tr6, r1\n-\tldmia\tr2, {r1, r2, r3, r4, r6, r7}\n+\tldmia\tr2, {r1, r2, r5, r6, r7}\n \tmovs\tr6, r1\n-\tstmia\tr2!, {r1, r3, r4, r5, r6}\n+\tstmia\tr2!, {r1, r7}\n \tmovs\tr6, r1\n-\tldmia\tr1!, {r3, r7}\n+\tldmia\tr1!, {r4, r7}\n \tmovs\tr6, r1\n \tsxtb\tr4, r1\n \tmovs\tr3, r1\n-\tldmia\tr2!, {r1, r3, r5, r7}\n+\tldmia\tr2!, {r1, r4, r5, r7}\n \tmovs\tr6, r1\n /usr/include/c++/10/ostream:611\n \tldr.w\tr7, [pc, #1436]\t@ 32b2c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18d48c>\n \tldr\tr2, [sp, #16]\n \tldr.w\tr1, [pc, #1436]\t@ 32b2c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18d490>\n \tldr\tr5, [r2, r7]\n \tadd\tr1, pc\n@@ -1641977,59 +1641977,59 @@\n \tb.n\t32b0a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18d272>\n /usr/include/boost/algorithm/string/detail/classification.hpp:227\n \tb.n\t32b148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18d314>\n \tb.n\t32b06e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18d23a>\n \tnop\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r3, r4, r6}\n+\tstmia\tr7!, {r5, r6}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r2, r6}\n+\tstmia\tr7!, {r1, r2, r3, r6}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r3, r4, r6}\n+\tstmia\tr7!, {r1, r5, r6}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r2, r5, r6}\n+\tstmia\tr7!, {r1, r2, r3, r5, r6}\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r2, r4, r5, r6, r7}\n+\tldmia\tr0!, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tuxth\tr0, r2\n+\tuxth\tr0, r3\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r3, r7}\n+\tstmia\tr7!, {r1, r4, r7}\n \tmovs\tr6, r1\n-\tstmia\tr6!, {r1, r3, r5, r6}\n+\tstmia\tr6!, {r1, r4, r5, r6}\n \tmovs\tr6, r1\n-\tldmia\tr0!, {r2, r3, r4}\n+\tldmia\tr0!, {r2, r5}\n \tmovs\tr6, r1\n-\tldmia\tr0!, {r2, r3}\n+\tldmia\tr0!, {r2, r4}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r3, r4, r6, r7}\n+\tstmia\tr7!, {r1, r5, r6, r7}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r2, r3, r5, r7}\n+\tstmia\tr7!, {r1, r2, r4, r5, r7}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r3, r7}\n+\tstmia\tr7!, {r1, r4, r7}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r2, r3, r4, r5, r6}\n+\tstmia\tr7!, {r2, r7}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r3, r4, r5, r6}\n+\tstmia\tr7!, {r7}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r3, r4, r5, r6}\n+\tstmia\tr7!, {r7}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r3, r4, r5, r6}\n+\tstmia\tr7!, {r7}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r2, r5, r6}\n+\tstmia\tr7!, {r1, r2, r3, r5, r6}\n \tmovs\tr6, r1\n-\tstmia\tr7!, {r1, r2, r3, r6}\n+\tstmia\tr7!, {r1, r2, r4, r6}\n \tmovs\tr6, r1\n-\tstmia\tr4!, {r1, r2, r3, r4, r5, r7}\n+\tstmia\tr4!, {r1, r2, r6, r7}\n \tmovs\tr6, r1\n MAFParse::parseLineHeaderReadGroup(std::__cxx11::basic_string, std::allocator >&, unsigned long long&):\n ./src/mira/maf_parse.C:1467\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r2\n \tldr\tr2, [pc, #260]\t@ (32b42c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18d5f8>)\n \tldr\tr3, [pc, #260]\t@ (32b430 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18d5fc>)\n@@ -1642163,19 +1642163,19 @@\n \tmovs\tr0, r3\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr0, r5, #0\n \tmovs\tr0, r3\n \tsubs\tr4, r6, r7\n \tmovs\tr0, r3\n-\tpush\t{r1, r4, r7}\n+\tpush\t{r1, r3, r4, r7}\n \tmovs\tr6, r1\n-\tpush\t{r3, lr}\n+\tpush\t{r4, lr}\n \tmovs\tr6, r1\n-\tpush\t{r1, r2, r4, lr}\n+\tpush\t{r1, r2, r3, r4, lr}\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseTagDataV2(std::__cxx11::basic_string, std::allocator >&, multitag_t&):\n ./src/mira/maf_parse.C:942\n@@ -1643753,19 +1643753,19 @@\n \tmovs\tr2, r3\n \tldr\tr4, [r4, #104]\t@ 0x68\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #4\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n-\tldmia\tr3!, {r5, r6, r7}\n+\tldmia\tr3, {r3, r5, r6, r7}\n \tmovs\tr4, r1\n-\tstr\tr6, [sp, #528]\t@ 0x210\n+\tstr\tr6, [sp, #560]\t@ 0x230\n \tmovs\tr6, r1\n-\tadd\tr7, pc, #656\t@ (adr r7, 32c274 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18e440>)\n+\tadd\tr7, pc, #688\t@ (adr r7, 32c294 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18e460>)\n \tmovs\tr6, r1\n \tlsrs\tr0, r3, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1644790,81 +1644790,81 @@\n \tblx\tb538 \n ./src/mira/maf_parse.C:1058 (discriminator 25)\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t32c70c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18e8d8>\n \tb.n\t32c7c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18e990>\n \tnop\n-\teor.w\tr0, r8, #9175040\t@ 0x8c0000\n-\tcmp\tr7, #136\t@ 0x88\n+\teors.w\tr0, r0, #9175040\t@ 0x8c0000\n+\tcmp\tr7, #148\t@ 0x94\n \tmovs\tr4, r1\n-\tadds\tr2, r7, #3\n+\tadds\tr2, r0, #4\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xb68e\n+\t\t\t@ instruction: 0xb696\n \tmovs\tr6, r1\n-\t\t\t@ instruction: 0xb6a6\n+\t\t\t@ instruction: 0xb6ae\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf3dc000c\n-\tcmp\tr6, #220\t@ 0xdc\n+\t\t\t@ instruction: 0xf3e4000c\n+\tcmp\tr6, #232\t@ 0xe8\n \tmovs\tr4, r1\n-\tadds\tr6, r1, #1\n+\tadds\tr6, r2, #1\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xb66a\n+\tcpsid\ti\n \tmovs\tr6, r1\n-\tpush\t{r1, r2, r3, r5, r6, r7, lr}\n+\tpush\t{r1, r2, r4, r5, r6, r7, lr}\n \tmovs\tr6, r1\n-\t\t\t@ instruction: 0xf278000c\n-\tpush\t{r3, r4, r5, r6, lr}\n+\t\t\t@ instruction: 0xf280000c\n+\tpush\t{r7, lr}\n \tmovs\tr6, r1\n-\tpush\t{r1, r4, r5, r6, lr}\n+\tpush\t{r1, r3, r4, r5, r6, lr}\n \tmovs\tr6, r1\n-\tldrb\tr0, [r1, #5]\n+\tldrb\tr0, [r2, #5]\n \tmovs\tr7, r1\n-\tpush\t{r1, r3, r6, lr}\n+\tpush\t{r1, r4, r6, lr}\n \tmovs\tr6, r1\n-\tpush\t{r6, lr}\n+\tpush\t{r3, r6, lr}\n \tmovs\tr6, r1\n-\tpush\t{r2, r3, r5, r6}\n+\tpush\t{r2, r4, r5, r6}\n \tmovs\tr6, r1\n-\t\t\t@ instruction: 0xf0f8000c\n-\tcbz\tr2, 32c8a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ea6e>\n+\tadd.w\tr0, r0, #12\n+\tpush\t{r1}\n \tmovs\tr6, r1\n-\tpush\t{r1, r2, r3, r4}\n+\tpush\t{r1, r2, r5}\n \tmovs\tr6, r1\n-\tcbz\tr4, 32c878 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ea44>\n+\tcbz\tr4, 32c87a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ea46>\n \tmovs\tr6, r1\n-\tvaddl.s8\tq8, d8, d12\n-\tuxtb\tr2, r1\n+\tvaddl.s16\tq8, d0, d12\n+\tuxtb\tr2, r2\n \tmovs\tr6, r1\n-\tuxtb\tr6, r0\n+\tuxtb\tr6, r1\n \tmovs\tr6, r1\n-\tstrb\tr6, [r3, #26]\n+\tstrb\tr6, [r4, #26]\n \tmovs\tr7, r1\n-\tuxth\tr2, r4\n+\tuxth\tr2, r5\n \tmovs\tr6, r1\n-\tuxth\tr2, r3\n+\tuxth\tr2, r4\n \tmovs\tr6, r1\n-\tcbz\tr0, 32c87a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ea46>\n+\tcbz\tr0, 32c87c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ea48>\n \tmovs\tr6, r1\n-\tcdp\t0, 15, cr0, cr12, cr12, {0}\n-\tcbz\tr4, 32c88e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ea5a>\n+\tvhadd.s8\td0, d4, d12\n+\tsxth\tr4, r0\n \tmovs\tr6, r1\n-\tasrs\tr0, r6, #29\n+\tasrs\tr0, r7, #29\n \tmovs\tr5, r1\n-\tsxth\tr2, r7\n+\tsxtb\tr2, r0\n \tmovs\tr6, r1\n \tstr\tr2, [r3, #48]\t@ 0x30\n \tmovs\tr2, r3\n-\tsxth\tr6, r6\n+\tsxth\tr6, r7\n \tmovs\tr6, r1\n-\tsub\tsp, #496\t@ 0x1f0\n+\tcbz\tr4, 32c864 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18ea30>\n \tmovs\tr6, r1\n \tstr\tr7, [sp, #80]\t@ 0x50\n \tmovs\tr3, r1\n \tstr\tr7, [sp, #48]\t@ 0x30\n \tmovs\tr3, r1\n MAFParse::parseTagData(std::__cxx11::basic_string, std::allocator >&, multitag_t&):\n ./src/mira/maf_parse.C:857\n@@ -1646553,17 +1646553,17 @@\n \tmovs\tr0, r0\n \tasrs\tr0, r5, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #4\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #496]\t@ 0x1f0\n+\tldr\tr2, [sp, #544]\t@ 0x220\n \tmovs\tr3, r1\n-\tldr\tr2, [sp, #472]\t@ 0x1d8\n+\tldr\tr2, [sp, #520]\t@ 0x208\n \tmovs\tr3, r1\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1646975,45 +1646975,45 @@\n \tb.n\t32d682 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18f84e>\n \tb.n\t32d694 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18f860>\n \tnop\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n \tldrh\tr2, [r0, #12]\n \tmovs\tr3, r1\n-\tb.n\t32d804 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18f9d0>\n+\tb.n\t32d814 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18f9e0>\n \tmovs\tr4, r1\n-\tadd\tr4, pc, #232\t@ (adr r4, 32d7c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18f98c>)\n+\tadd\tr4, pc, #264\t@ (adr r4, 32d7e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18f9ac>)\n \tmovs\tr6, r1\n-\tadd\tr3, pc, #584\t@ (adr r3, 32d924 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18faf0>)\n+\tadd\tr3, pc, #616\t@ (adr r3, 32d944 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fb10>)\n \tmovs\tr6, r1\n-\tstr\tr0, [r5, #116]\t@ 0x74\n+\tstr\tr0, [r6, #116]\t@ 0x74\n \tmovs\tr7, r1\n-\tadd\tr3, pc, #424\t@ (adr r3, 32d88c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa58>)\n+\tadd\tr3, pc, #456\t@ (adr r3, 32d8ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa78>)\n \tmovs\tr6, r1\n-\tadd\tr3, pc, #384\t@ (adr r3, 32d868 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa34>)\n+\tadd\tr3, pc, #416\t@ (adr r3, 32d888 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa54>)\n \tmovs\tr6, r1\n-\tadd\tr2, pc, #568\t@ (adr r2, 32d924 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18faf0>)\n+\tadd\tr2, pc, #600\t@ (adr r2, 32d944 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fb10>)\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsvc\t194\t@ 0xc2\n+\tsvc\t202\t@ 0xca\n \tmovs\tr4, r1\n-\tadd\tr3, pc, #400\t@ (adr r3, 32d88c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa58>)\n+\tadd\tr3, pc, #432\t@ (adr r3, 32d8ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa78>)\n \tmovs\tr6, r1\n-\tadd\tr2, pc, #752\t@ (adr r2, 32d9f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fbbc>)\n+\tadd\tr2, pc, #784\t@ (adr r2, 32da10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fbdc>)\n \tmovs\tr6, r1\n-\tstr\tr2, [r2, #104]\t@ 0x68\n+\tstr\tr2, [r3, #104]\t@ 0x68\n \tmovs\tr7, r1\n-\tadd\tr2, pc, #592\t@ (adr r2, 32d958 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fb24>)\n+\tadd\tr2, pc, #624\t@ (adr r2, 32d978 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fb44>)\n \tmovs\tr6, r1\n-\tadd\tr2, pc, #552\t@ (adr r2, 32d934 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fb00>)\n+\tadd\tr2, pc, #584\t@ (adr r2, 32d954 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fb20>)\n \tmovs\tr6, r1\n-\tadd\tr1, pc, #736\t@ (adr r1, 32d9f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fbbc>)\n+\tadd\tr1, pc, #768\t@ (adr r1, 32da10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fbdc>)\n \tmovs\tr6, r1\n \tstrh\tr2, [r1, #62]\t@ 0x3e\n \tmovs\tr3, r1\n MAFParse::parseLineRT(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:842\n \tldr\tr2, [pc, #316]\t@ (32d854 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa20>)\n \tldr\tr3, [pc, #320]\t@ (32d858 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x18fa24>)\n@@ -1647184,19 +1647184,19 @@\n \tnop\n \tstr.w\tr0, [r8, r7, lsl #1]\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh.w\tr0, [r8, r7, lsl #1]\n \tstrb.w\tr0, [r2, r7, lsl #1]\n \t\t\t@ instruction: 0xf7e00017\n-\tstr\tr0, [sp, #416]\t@ 0x1a0\n+\tstr\tr0, [sp, #448]\t@ 0x1c0\n \tmovs\tr6, r1\n-\tstr\tr1, [sp, #360]\t@ 0x168\n+\tstr\tr1, [sp, #392]\t@ 0x188\n \tmovs\tr6, r1\n-\tstr\tr1, [sp, #368]\t@ 0x170\n+\tstr\tr1, [sp, #400]\t@ 0x190\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MAFParse::parseLineCT(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/mira/maf_parse.C:1200\n@@ -1648620,17 +1648620,17 @@\n \tmovs\tr2, r3\n \tldr\tr3, [pc, #264]\t@ (32e708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1908d4>)\n \tmovs\tr2, r3\n \tldr\tr3, [pc, #32]\t@ (32e624 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1907f0>)\n \tmovs\tr2, r3\n \tldr\tr3, [pc, #24]\t@ (32e620 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1907ec>)\n \tmovs\tr2, r3\n-\tmovs\tr6, #78\t@ 0x4e\n+\tmovs\tr6, #86\t@ 0x56\n \tmovs\tr5, r1\n-\tbls.n\t32e690 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19085c>\n+\tbls.n\t32e6a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19086c>\n \tmovs\tr5, r1\n \tldr\tr2, [pc, #272]\t@ (32e724 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1908f0>)\n \tmovs\tr2, r3\n \tldr\tr2, [pc, #208]\t@ (32e6e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1908b4>)\n \tmovs\tr2, r3\n \tldr\tr2, [pc, #144]\t@ (32e6ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x190878>)\n \tmovs\tr2, r3\n@@ -1648656,23 +1648656,23 @@\n \tmovs\tr2, r3\n \tldr\tr0, [pc, #552]\t@ (32e870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x190a3c>)\n \tmovs\tr2, r3\n \tblxns\tr2\n \tmovs\tr2, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr2, r0, #16\n+\tlsrs\tr6, r1, #16\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #816]\t@ 0x330\n+\tstr\tr5, [sp, #848]\t@ 0x350\n \tmovs\tr6, r1\n-\tstr\tr5, [sp, #800]\t@ 0x320\n+\tstr\tr5, [sp, #832]\t@ 0x340\n \tmovs\tr6, r1\n-\tstrh\tr2, [r1, #26]\n+\tstrh\tr2, [r2, #26]\n \tmovs\tr6, r1\n-\tstr\tr5, [sp, #136]\t@ 0x88\n+\tstr\tr5, [sp, #168]\t@ 0xa8\n \tmovs\tr6, r1\n \torn\tr0, r0, r7, lsr #32\n /usr/include/c++/10/bits/ios_base.h:166\n \tldr.w\tr7, [r4, #196]\t@ 0xc4\n ./src/mira/../../src/mira/maf_parse.H:227\n \tlsls\tr3, r7, #30\n \tbpl.w\t32e4fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1906c8>\n@@ -1649064,57 +1649064,57 @@\n \tnop\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr4, r7, #7\n+\tsubs\tr4, r0, #0\n \tmovs\tr5, r1\n-\tbeq.n\t32e9cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x190b98>\n+\tbeq.n\t32e9dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x190ba8>\n \tmovs\tr5, r1\n-\tlsrs\tr4, r5, #1\n+\tlsrs\tr0, r7, #1\n \tmovs\tr4, r1\n-\tlsrs\tr0, r3, #32\n+\tlsrs\tr4, r4, #32\n \tmovs\tr4, r1\n-\tlsls\tr0, r7, #31\n+\tlsrs\tr4, r0, #32\n \tmovs\tr4, r1\n-\tstr\tr1, [sp, #928]\t@ 0x3a0\n+\tstr\tr1, [sp, #960]\t@ 0x3c0\n \tmovs\tr6, r1\n \trors\tr4, r5\n \tmovs\tr2, r3\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tldrh.w\tr0, [r2, r7, lsl #1]\n-\tstr\tr0, [sp, #648]\t@ 0x288\n+\tstr\tr0, [sp, #680]\t@ 0x2a8\n \tmovs\tr6, r1\n \tasrs\tr2, r0\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf7440017\n-\tstr\tr0, [sp, #480]\t@ 0x1e0\n+\tstr\tr0, [sp, #512]\t@ 0x200\n \tmovs\tr6, r1\n \tlsrs\tr4, r2\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf71a0017\n-\tstr\tr0, [sp, #312]\t@ 0x138\n+\tstr\tr0, [sp, #344]\t@ 0x158\n \tmovs\tr6, r1\n \tlsls\tr4, r4\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf6e60017\n-\tstr\tr0, [sp, #136]\t@ 0x88\n+\tstr\tr0, [sp, #168]\t@ 0xa8\n \tmovs\tr6, r1\n \teors\tr2, r6\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf6b60017\n-\tldrh\tr6, [r6, #62]\t@ 0x3e\n+\tldrh\tr6, [r7, #62]\t@ 0x3e\n \tmovs\tr6, r1\n \teors\tr6, r0\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf68c0017\n-\tldrh\tr4, [r1, #62]\t@ 0x3e\n+\tldrh\tr4, [r2, #62]\t@ 0x3e\n \tmovs\tr6, r1\n \tands\tr0, r3\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf65a0017\n \t\t\t@ instruction: 0xf6240017\n ./src/mira/maf_parse.C:356 (discriminator 2)\n \tldr.w\tr1, [pc, #3912]\t@ 32f9b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x191b7c>\n@@ -1650605,210 +1650605,210 @@\n ./src/mira/maf_parse.C:353\n \tldr\tr5, [pc, #628]\t@ (32fc14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x191de0>)\n \tadd\tr5, pc\n \tadd.w\tr0, r5, #536\t@ 0x218\n \tblx\tb430 <__cxa_guard_abort@plt>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tldrh\tr4, [r5, #54]\t@ 0x36\n+\tldrh\tr4, [r6, #54]\t@ 0x36\n \tmovs\tr6, r1\n \tsubs\tr7, #50\t@ 0x32\n \tmovs\tr2, r3\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tsbcs.w\tr0, r4, #9895936\t@ 0x970000\n-\tldrh\tr2, [r7, #52]\t@ 0x34\n+\tldrh\tr2, [r0, #54]\t@ 0x36\n \tmovs\tr6, r1\n \tsubs\tr6, #252\t@ 0xfc\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf53e0017\n-\tadd\tr7, pc, #832\t@ (adr r7, 32fd10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x191edc>)\n+\tadd\tr7, pc, #864\t@ (adr r7, 32fd30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x191efc>)\n \tmovs\tr4, r1\n \tsubs\tr6, #194\t@ 0xc2\n \tmovs\tr2, r3\n \tadd.w\tr0, r4, #9895936\t@ 0x970000\n-\tldrh\tr2, [r2, #50]\t@ 0x32\n+\tldrh\tr2, [r3, #50]\t@ 0x32\n \tmovs\tr6, r1\n \tsubs\tr6, #144\t@ 0x90\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf4d20017\n \teors.w\tr0, r8, #9895936\t@ 0x970000\n-\tldrh\tr6, [r4, #46]\t@ 0x2e\n+\tldrh\tr6, [r5, #46]\t@ 0x2e\n \tmovs\tr6, r1\n \tsubs\tr6, #28\n \tmovs\tr2, r3\n \torrs.w\tr0, lr, #9895936\t@ 0x970000\n-\t\t\t@ instruction: 0xb8d0\n+\t\t\t@ instruction: 0xb8d8\n \tmovs\tr4, r1\n \tsubs\tr5, #234\t@ 0xea\n \tmovs\tr2, r3\n \tbic.w\tr0, ip, #9895936\t@ 0x970000\n-\tldrh\tr6, [r7, #42]\t@ 0x2a\n+\tldrh\tr6, [r0, #44]\t@ 0x2c\n \tmovs\tr6, r1\n \tsubs\tr5, #180\t@ 0xb4\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf3f60017\n \t\t\t@ instruction: 0xf3bc0017\n-\tldrh\tr6, [r1, #38]\t@ 0x26\n+\tldrh\tr6, [r2, #38]\t@ 0x26\n \tmovs\tr6, r1\n \tsubs\tr5, #64\t@ 0x40\n \tmovs\tr2, r3\n \tusat\tr0, #23, r2\n-\tadds\tr0, r4, r2\n+\tadds\tr0, r5, r2\n \tmovs\tr5, r1\n \tsubs\tr5, #14\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf3500017\n-\tldrh\tr6, [r4, #34]\t@ 0x22\n+\tldrh\tr6, [r5, #34]\t@ 0x22\n \tmovs\tr6, r1\n \tsubs\tr4, #216\t@ 0xd8\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf3160017\n-\tldrh\tr4, [r6, #32]\n+\tldrh\tr4, [r7, #32]\n \tmovs\tr6, r1\n \tsubs\tr4, #158\t@ 0x9e\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf2e00017\n-\tcmp\tr7, #70\t@ 0x46\n+\tcmp\tr7, #78\t@ 0x4e\n \tmovs\tr7, r1\n \tsubs\tr4, #108\t@ 0x6c\n \tmovs\tr2, r3\n \tsubw\tr0, lr, #23\n-\tldrh\tr4, [r1, #30]\n+\tldrh\tr4, [r2, #30]\n \tmovs\tr6, r1\n \tsubs\tr4, #54\t@ 0x36\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf2740017\n-\tldrh\tr2, [r3, #28]\n+\tldrh\tr2, [r4, #28]\n \tmovs\tr6, r1\n \tsubs\tr3, #252\t@ 0xfc\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf23e0017\n-\tldrh\tr0, [r5, #26]\n+\tldrh\tr0, [r6, #26]\n \tmovs\tr6, r1\n \tsubs\tr3, #202\t@ 0xca\n \tmovs\tr2, r3\n \taddw\tr0, ip, #23\n-\tldrh\tr2, [r7, #22]\n+\tldrh\tr2, [r0, #24]\n \tmovs\tr6, r1\n \tsubs\tr3, #148\t@ 0x94\n \tmovs\tr2, r3\n \trsbs\tr0, r6, #23\n-\tldrh\tr0, [r2, #22]\n+\tldrh\tr0, [r3, #22]\n \tmovs\tr6, r1\n \tsubs\tr3, #90\t@ 0x5a\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf19c0017\n-\tldrh\tr6, [r4, #20]\n+\tldrh\tr6, [r5, #20]\n \tmovs\tr6, r1\n \tsubs\tr3, #40\t@ 0x28\n \tmovs\tr2, r3\n \tsbc.w\tr0, sl, #23\n-\tstrh\tr0, [r1, #46]\t@ 0x2e\n+\tstrh\tr0, [r2, #46]\t@ 0x2e\n \tmovs\tr6, r1\n \tsubs\tr2, #242\t@ 0xf2\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf1300017\n-\tldrh\tr2, [r1, #20]\n+\tldrh\tr2, [r2, #20]\n \tmovs\tr6, r1\n \tsubs\tr2, #184\t@ 0xb8\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf0fa0017\n-\tldrh\tr0, [r3, #18]\n+\tldrh\tr0, [r4, #18]\n \tmovs\tr6, r1\n \tsubs\tr2, #134\t@ 0x86\n \tmovs\tr2, r3\n \t\t\t@ instruction: 0xf0c80017\n-\tldrh\tr6, [r4, #16]\n+\tldrh\tr6, [r5, #16]\n \tmovs\tr6, r1\n \tsubs\tr2, #80\t@ 0x50\n \tmovs\tr2, r3\n \teors.w\tr0, r2, #23\n-\tldrh\tr4, [r6, #14]\n+\tldrh\tr4, [r7, #14]\n \tmovs\tr6, r1\n \tsubs\tr2, #22\n \tmovs\tr2, r3\n \torrs.w\tr0, r8, #23\n-\tldrh\tr2, [r0, #14]\n+\tldrh\tr2, [r1, #14]\n \tmovs\tr6, r1\n \tsubs\tr1, #228\t@ 0xe4\n \tmovs\tr2, r3\n \tbic.w\tr0, r6, #23\n-\tldrh\tr0, [r2, #12]\n+\tldrh\tr0, [r3, #12]\n \tmovs\tr6, r1\n \tsubs\tr1, #174\t@ 0xae\n \tmovs\tr2, r3\n \tvshr.s32\td16, d7, #16\n-\tldrh\tr6, [r3, #10]\n+\tldrh\tr6, [r4, #10]\n \tmovs\tr6, r1\n \tsubs\tr1, #116\t@ 0x74\n \tmovs\tr2, r3\n \tvshr.s32\td0, d7, #10\n-\tldrh\tr4, [r5, #8]\n+\tldrh\tr4, [r6, #8]\n \tmovs\tr6, r1\n \tsubs\tr1, #66\t@ 0x42\n \tmovs\tr2, r3\n \tvmov.i32\td0, #71\t@ 0x00000047\n-\tldrh\tr2, [r7, #6]\n+\tldrh\tr2, [r0, #8]\n \tmovs\tr6, r1\n \tsubs\tr1, #12\n \tmovs\tr2, r3\n \tvqadd.s8\td16, d14, d7\n-\tldrh\tr0, [r1, #6]\n+\tldrh\tr0, [r2, #6]\n \tmovs\tr6, r1\n \tsubs\tr0, #210\t@ 0xd2\n \tmovs\tr2, r3\n \tvqadd.s16\td0, d4, d7\n-\tldmia\tr6!, {r1}\n+\tldmia\tr6!, {r1, r3}\n \tmovs\tr5, r1\n \tsubs\tr0, #160\t@ 0xa0\n \tmovs\tr2, r3\n \tmcr\t0, 7, r0, cr2, cr7, {0}\n-\tldr\tr4, [r7, #4]\n+\tldr\tr4, [r0, #8]\n \tmovs\tr6, r1\n \tsubs\tr0, #106\t@ 0x6a\n \tmovs\tr2, r3\n \tmcr\t0, 5, r0, cr12, cr7, {0}\n-\tldrh\tr2, [r5, #0]\n+\tldrh\tr2, [r6, #0]\n \tmovs\tr6, r1\n \tsubs\tr0, #48\t@ 0x30\n \tmovs\tr2, r3\n \tmrc\t0, 3, r0, cr2, cr7, {0}\n-\tstrh\tr0, [r7, #62]\t@ 0x3e\n+\tldrh\tr0, [r0, #0]\n \tmovs\tr6, r1\n \tadds\tr7, #254\t@ 0xfe\n \tmovs\tr2, r3\n \tmcr\t0, 2, r0, cr0, cr7, {0}\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #752\t@ 0x2f0\n+\tadd\tr3, sp, #800\t@ 0x320\n \tmovs\tr3, r1\n-\tstrh\tr2, [r5, #38]\t@ 0x26\n+\tstrh\tr2, [r6, #38]\t@ 0x26\n \tmovs\tr6, r1\n-\tstr\tr1, [sp, #184]\t@ 0xb8\n+\tstr\tr1, [sp, #216]\t@ 0xd8\n \tmovs\tr4, r1\n-\tstrh\tr6, [r1, #38]\t@ 0x26\n+\tstrh\tr6, [r2, #38]\t@ 0x26\n \tmovs\tr6, r1\n-\tstrh\tr2, [r5, #38]\t@ 0x26\n+\tstrh\tr2, [r6, #38]\t@ 0x26\n \tmovs\tr6, r1\n-\tstrh\tr6, [r3, #38]\t@ 0x26\n+\tstrh\tr6, [r4, #38]\t@ 0x26\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #1008\t@ 0x3f0\n+\tadd\tr3, sp, #32\n \tmovs\tr3, r1\n-\tstrh\tr2, [r5, #32]\n+\tstrh\tr2, [r6, #32]\n \tmovs\tr6, r1\n-\tstrh\tr6, [r4, #36]\t@ 0x24\n+\tstrh\tr6, [r5, #36]\t@ 0x24\n \tmovs\tr6, r1\n-\tstrh\tr2, [r4, #32]\n+\tstrh\tr2, [r5, #32]\n \tmovs\tr6, r1\n-\tstrh\tr6, [r2, #32]\n+\tstrh\tr6, [r3, #32]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tadds\tr2, #164\t@ 0xa4\n \tmovs\tr2, r3\n \tadds\tr2, #146\t@ 0x92\n \tmovs\tr2, r3\n@@ -1650820,15 +1650820,15 @@\n \tmovs\tr2, r3\n \tadds\tr2, #16\n \tmovs\tr2, r3\n \tadds\tr1, #254\t@ 0xfe\n \tmovs\tr2, r3\n \tadds\tr1, #236\t@ 0xec\n \tmovs\tr2, r3\n-\tstrb\tr0, [r5, #0]\n+\tstrb\tr0, [r6, #0]\n \tmovs\tr6, r1\n \tadds\tr1, #188\t@ 0xbc\n \tmovs\tr2, r3\n \tadds\tr1, #172\t@ 0xac\n \tmovs\tr2, r3\n \tadds\tr1, #156\t@ 0x9c\n \tmovs\tr2, r3\n@@ -1651372,35 +1651372,35 @@\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbcs.n\t32ff9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x192168>\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr4, [r6, #23]\n+\tldrb\tr4, [r7, #23]\n \tmovs\tr6, r1\n-\tadd\tr0, pc, #648\t@ (adr r0, 330270 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19243c>)\n+\tadd\tr0, pc, #696\t@ (adr r0, 3302a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19246c>)\n \tmovs\tr3, r1\n \tbne.n\t32ff68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x192134>\n \tmovs\tr7, r2\n-\tldrb\tr6, [r2, #19]\n+\tldrb\tr6, [r3, #19]\n \tmovs\tr6, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr6, [r2, #13]\n+\tldrb\tr6, [r3, #13]\n \tmovs\tr6, r1\n-\tldrb\tr2, [r7, #12]\n+\tldrb\tr2, [r0, #13]\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n@@ -1651666,19 +1651666,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #24]\n+\tstr\tr4, [sp, #72]\t@ 0x48\n \tmovs\tr3, r1\n-\tstr\tr3, [sp, #1000]\t@ 0x3e8\n+\tstr\tr4, [sp, #24]\n \tmovs\tr3, r1\n-\tcbnz\tr2, 3302be , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19248a>\n+\tcbnz\tr2, 3302c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19248c>\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1651944,19 +1651944,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #784]\t@ 0x310\n+\tstr\tr1, [sp, #832]\t@ 0x340\n \tmovs\tr3, r1\n-\tstr\tr1, [sp, #736]\t@ 0x2e0\n+\tstr\tr1, [sp, #784]\t@ 0x310\n \tmovs\tr3, r1\n-\tcbnz\tr0, 3304ae , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19267a>\n+\tcbnz\tr0, 3304b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19267c>\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1652222,19 +1652222,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r0, #60]\t@ 0x3c\n+\tldrh\tr0, [r2, #60]\t@ 0x3c\n \tmovs\tr3, r1\n-\tldrh\tr0, [r7, #58]\t@ 0x3a\n+\tldrh\tr4, [r0, #60]\t@ 0x3c\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xb748\n+\t\t\t@ instruction: 0xb750\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1652499,19 +1652499,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr6, [r0, #42]\t@ 0x2a\n+\tldrh\tr2, [r2, #42]\t@ 0x2a\n \tmovs\tr3, r1\n-\tldrh\tr2, [r7, #40]\t@ 0x28\n+\tldrh\tr6, [r0, #42]\t@ 0x2a\n \tmovs\tr3, r1\n-\tpush\t{r1, r3, lr}\n+\tpush\t{r1, r4, lr}\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1652672,15 +1652672,15 @@\n \tldr.w\tfp, [r5, #8]\n \tb.n\t330974 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x192b40>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (330a78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x192c44>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrh\tr0, [r4, #22]\n+\tldrh\tr4, [r5, #22]\n \tmovs\tr3, r1\n __gnu_cxx::__enable_if::__value, bool>::__type std::operator==(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&) [clone .isra.0]:\n /usr/include/c++/10/bits/basic_string.h:6174\n \tcmp\tr1, r3\n \tbeq.n\t330a84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x192c50>\n \tmovs\tr0, #0\n \tbx\tlr\n@@ -1653193,15 +1653193,15 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tstmia\tr2!, {r2, r4, r5, r6}\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr2!, {r1, r5}\n \tmovs\tr7, r2\n-\tldrsh\tr6, [r3, r3]\n+\tldrsh\tr2, [r5, r3]\n \tmovs\tr3, r1\n boost::re_detail_107400::repeater_count<__gnu_cxx::__normal_iterator, std::allocator > > >::unwind_until(int, boost::re_detail_107400::repeater_count<__gnu_cxx::__normal_iterator, std::allocator > > >*, int) [clone .isra.0]:\n /usr/include/boost/regex/v4/perl_matcher.hpp:270\n \tmvn.w\tr3, #1\n \tsubs\tr2, r3, r2\n /usr/include/boost/regex/v4/perl_matcher.hpp:268\n \tcbz\tr1, 330da6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x192f72>\n@@ -1654001,65 +1654001,65 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tstmia\tr0!, {r3, r4}\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr0, [r4, #52]\t@ 0x34\n+\tldr\tr0, [r5, #52]\t@ 0x34\n \tmovs\tr6, r1\n-\tldr\tr0, [r4, #52]\t@ 0x34\n+\tldr\tr0, [r5, #52]\t@ 0x34\n \tmovs\tr6, r1\n-\tldr\tr2, [r2, #52]\t@ 0x34\n+\tldr\tr2, [r3, #52]\t@ 0x34\n \tmovs\tr6, r1\n-\tldr\tr4, [r4, #48]\t@ 0x30\n+\tldr\tr4, [r5, #48]\t@ 0x30\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr6, [r1, #44]\t@ 0x2c\n+\tldr\tr6, [r2, #44]\t@ 0x2c\n \tmovs\tr6, r1\n-\tldrb\tr0, [r1, #8]\n+\tldrb\tr0, [r2, #8]\n \tmovs\tr4, r1\n-\tldrh\tr0, [r4, #2]\n+\tldrh\tr0, [r5, #2]\n \tmovs\tr4, r1\n-\tstrb\tr4, [r2, #22]\n+\tstrb\tr4, [r3, #22]\n \tmovs\tr4, r1\n-\tldrh\tr0, [r7, #0]\n+\tldrh\tr0, [r0, #2]\n \tmovs\tr4, r1\n-\tldrh\tr2, [r4, #0]\n+\tldrh\tr2, [r5, #0]\n \tmovs\tr4, r1\n-\tldrh\tr4, [r2, #0]\n+\tldrh\tr4, [r3, #0]\n \tmovs\tr4, r1\n-\tldrh\tr6, [r0, #0]\n+\tldrh\tr6, [r1, #0]\n \tmovs\tr4, r1\n-\tstrh\tr0, [r7, #62]\t@ 0x3e\n+\tldrh\tr0, [r0, #0]\n \tmovs\tr4, r1\n-\tstrh\tr2, [r5, #62]\t@ 0x3e\n+\tstrh\tr2, [r6, #62]\t@ 0x3e\n \tmovs\tr4, r1\n-\tstrh\tr6, [r3, #62]\t@ 0x3e\n+\tstrh\tr6, [r4, #62]\t@ 0x3e\n \tmovs\tr4, r1\n-\tstrh\tr2, [r2, #62]\t@ 0x3e\n+\tstrh\tr2, [r3, #62]\t@ 0x3e\n \tmovs\tr4, r1\n-\tstrh\tr4, [r0, #62]\t@ 0x3e\n+\tstrh\tr4, [r1, #62]\t@ 0x3e\n \tmovs\tr4, r1\n-\trors\tr0, r7\n+\ttst\tr0, r0\n \tmovs\tr6, r1\n-\tstrh\tr0, [r2, #60]\t@ 0x3c\n+\tstrh\tr0, [r3, #60]\t@ 0x3c\n \tmovs\tr4, r1\n-\tstrh\tr2, [r1, #60]\t@ 0x3c\n+\tstrh\tr2, [r2, #60]\t@ 0x3c\n \tmovs\tr4, r1\n-\tstrh\tr2, [r7, #58]\t@ 0x3a\n+\tstrh\tr2, [r0, #60]\t@ 0x3c\n \tmovs\tr4, r1\n-\tstrh\tr4, [r5, #58]\t@ 0x3a\n+\tstrh\tr4, [r6, #58]\t@ 0x3a\n \tmovs\tr4, r1\n-\tstrh\tr6, [r3, #58]\t@ 0x3a\n+\tstrh\tr6, [r4, #58]\t@ 0x3a\n \tmovs\tr4, r1\n-\tstrh\tr0, [r2, #58]\t@ 0x3a\n+\tstrh\tr0, [r3, #58]\t@ 0x3a\n \tmovs\tr4, r1\n-\tcmp\tr2, #4\n+\tcmp\tr2, #12\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n@@ -1654784,31 +1654784,31 @@\n \tb.n\t3318f6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x193ac2>\n \tb.n\t3318ba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x193a86>\n \tnop\n \thlt\t0x0024\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr0, [r1, #100]\t@ 0x64\n+\tstr\tr0, [r2, #100]\t@ 0x64\n \tmovs\tr6, r1\n \trev16\tr0, r6\n \tmovs\tr7, r2\n \tcbnz\tr0, 331932 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x193afe>\n \tmovs\tr7, r2\n-\tstr\tr4, [r1, #52]\t@ 0x34\n+\tstr\tr4, [r2, #52]\t@ 0x34\n \tmovs\tr6, r1\n-\tstr\tr2, [r6, #56]\t@ 0x38\n+\tstr\tr2, [r7, #56]\t@ 0x38\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [r7, #52]\t@ 0x34\n+\tstr\tr6, [r0, #56]\t@ 0x38\n \tmovs\tr6, r1\n-\tstr\tr0, [r4, #48]\t@ 0x30\n+\tstr\tr0, [r5, #48]\t@ 0x30\n \tmovs\tr6, r1\n Manifest::provideFileNames():\n ./src/mira/manifest.C:535\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_list.h:153\n \tmovs\tr2, #0\n ./src/mira/manifest.C:535\n@@ -1655298,21 +1655298,21 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t331c68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x193e34>\n \t\t\t@ instruction: 0xb614\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsls\tr4, r0, #29\n+\tlsls\tr4, r1, #29\n \tmovs\tr5, r1\n-\tstr\tr1, [sp, #984]\t@ 0x3d8\n+\tstr\tr2, [sp, #8]\n \tmovs\tr3, r1\n-\tlsls\tr0, r6, #28\n+\tlsls\tr0, r7, #28\n \tmovs\tr5, r1\n-\tlsls\tr0, r0, #20\n+\tlsls\tr0, r1, #20\n \tmovs\tr5, r1\n \tcbz\tr0, 331cec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x193eb8>\n \tmovs\tr7, r2\n \tsbcs\tr2, r4\n \tmovs\tr3, r1\n Manifest::Manifest():\n ./src/mira/manifest.C:45\n@@ -1656936,22 +1656936,22 @@\n \tb.n\t3324c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19468c>\n \tcbz\tr2, 332868 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x194a34>\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcbz\tr0, 33286c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x194a38>\n \tmovs\tr7, r2\n-\tldrsh\tr2, [r7, r0]\n-\tmovs\tr6, r1\n-\tldrsh\tr4, [r7, r0]\n+\tldrsh\tr2, [r0, r1]\n \tmovs\tr6, r1\n-\tstr\tr2, [r5, #64]\t@ 0x40\n+\tldrsh\tr4, [r0, r1]\n \tmovs\tr6, r1\n \tstr\tr2, [r6, #64]\t@ 0x40\n \tmovs\tr6, r1\n+\tstr\tr2, [r7, #64]\t@ 0x40\n+\tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr6, [sp, #44]\t@ 0x2c\n /usr/include/c++/10/bits/basic_string.h:814\n \tldrd\tip, r3, [r6]\n \tadd\tr3, ip\n@@ -1659352,112 +1659352,112 @@\n \tldr.w\tr2, [r1, lr]\n \tldr.w\tr1, [r1, ip]\n \tblx\tb700 <__cxa_throw@plt>\n /usr/include/c++/10/bits/basic_string.h:966\n \tmovs\tr3, #15\n \tb.w\t33317a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195346>\n \tnop\n-\tldr\tr7, [pc, #200]\t@ (333a7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195c48>)\n+\tldr\tr7, [pc, #232]\t@ (333a9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195c68>)\n \tmovs\tr6, r1\n \tadds\tr1, #126\t@ 0x7e\n \tmovs\tr3, r1\n-\tstrb\tr6, [r5, #2]\n+\tstrb\tr2, [r7, #2]\n \tmovs\tr3, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstr\tr0, [r0, #76]\t@ 0x4c\n+\tstr\tr4, [r1, #76]\t@ 0x4c\n \tmovs\tr3, r1\n-\tstr\tr2, [r6, #72]\t@ 0x48\n+\tstr\tr6, [r7, #72]\t@ 0x48\n \tmovs\tr3, r1\n-\tldrh\tr0, [r0, #36]\t@ 0x24\n+\tldrh\tr0, [r1, #36]\t@ 0x24\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrb\tr4, [r0, r4]\n+\tstrb\tr4, [r1, r4]\n \tmovs\tr6, r1\n-\tstrb\tr6, [r2, r3]\n+\tstrb\tr6, [r3, r3]\n \tmovs\tr6, r1\n-\tstrb\tr4, [r4, r5]\n+\tstrb\tr4, [r5, r5]\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr3, [pc, #16]\t@ (3339fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195bc8>)\n+\tldr\tr3, [pc, #48]\t@ (333a1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195be8>)\n \tmovs\tr6, r1\n-\tstrh\tr2, [r4, r1]\n+\tstrh\tr2, [r5, r1]\n \tmovs\tr6, r1\n-\tldr\tr1, [pc, #768]\t@ (333cf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195ec0>)\n+\tldr\tr1, [pc, #800]\t@ (333d14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195ee0>)\n \tmovs\tr6, r1\n \tldr\tr3, [sp, #352]\t@ 0x160\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr2, [r6, r1]\n+\tstr\tr2, [r7, r1]\n \tmovs\tr6, r1\n-\tstr\tr6, [r1, r2]\n+\tstr\tr6, [r2, r2]\n \tmovs\tr6, r1\n-\tstr\tr4, [r5, r2]\n+\tstr\tr4, [r6, r2]\n \tmovs\tr6, r1\n-\tlsls\tr4, r0, #31\n+\tlsls\tr4, r1, #31\n \tmovs\tr7, r1\n-\tstr\tr0, [r1, r2]\n+\tstr\tr0, [r2, r2]\n \tmovs\tr6, r1\n-\tldr\tr0, [pc, #264]\t@ (333b1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195ce8>)\n+\tldr\tr0, [pc, #296]\t@ (333b3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195d08>)\n \tmovs\tr6, r1\n-\tstr\tr4, [r5, r4]\n+\tstr\tr4, [r6, r4]\n \tmovs\tr6, r1\n-\t\t\t@ instruction: 0x47c2\n+\t\t\t@ instruction: 0x47ca\n \tmovs\tr6, r1\n-\tldmia\tr7!, {r1, r2, r3, r4, r6}\n+\tldmia\tr7!, {r1, r2, r5, r6}\n \tmovs\tr4, r1\n-\tstr\tr4, [r1, r1]\n-\tmovs\tr6, r1\n-\tstr\tr2, [r3, r1]\n-\tmovs\tr6, r1\n-\tstr\tr4, [r7, r0]\n-\tmovs\tr6, r1\n-\tmov\tr8, r7\n+\tstr\tr4, [r2, r1]\n \tmovs\tr6, r1\n-\tldr\tr1, [pc, #64]\t@ (333a74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195c40>)\n+\tstr\tr2, [r4, r1]\n \tmovs\tr6, r1\n-\tldr\tr1, [pc, #72]\t@ (333a80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195c4c>)\n+\tstr\tr4, [r0, r1]\n \tmovs\tr6, r1\n-\tcmp\tr6, r0\n+\tnop\t\t\t@ (mov r8, r8)\n \tmovs\tr6, r1\n-\tadd\tsl, pc\n+\tldr\tr1, [pc, #96]\t@ (333a94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195c60>)\n \tmovs\tr6, r1\n-\tmov\tr2, r2\n+\tldr\tr1, [pc, #104]\t@ (333aa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195c6c>)\n \tmovs\tr6, r1\n-\tmov\tr6, r1\n+\tcmp\tr6, r1\n \tmovs\tr6, r1\n \tcmp\tr2, r0\n \tmovs\tr6, r1\n-\tadd\tr6, fp\n+\tmov\tr2, r3\n \tmovs\tr6, r1\n-\tadd\tr2, sl\n+\tmov\tr6, r2\n \tmovs\tr6, r1\n-\tcmp\tr2, sp\n+\tcmp\tr2, r1\n \tmovs\tr6, r1\n-\tmov\tr2, r5\n+\tadd\tr6, ip\n \tmovs\tr6, r1\n \tadd\tr2, fp\n \tmovs\tr6, r1\n-\tbics\tr2, r6\n+\tcmp\tr2, lr\n \tmovs\tr6, r1\n-\tbics\tr6, r4\n+\tmov\tr2, r6\n \tmovs\tr6, r1\n-\tmov\tr2, ip\n+\tadd\tr2, ip\n \tmovs\tr6, r1\n-\tmov\tlr, r1\n+\tbics\tr2, r7\n \tmovs\tr6, r1\n \tbics\tr6, r5\n \tmovs\tr6, r1\n+\tmov\tr2, sp\n+\tmovs\tr6, r1\n+\tmov\tlr, r2\n+\tmovs\tr6, r1\n+\tbics\tr6, r6\n+\tmovs\tr6, r1\n /usr/include/c++/10/bits/basic_string.h:6187\n \tldr.w\tr1, [pc, #3184]\t@ 3346e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1968b4>\n \tldr\tr0, [sp, #44]\t@ 0x2c\n \tadd\tr1, pc\n \tblx\tbb30 , std::allocator >::compare(char const*) const@plt>\n ./src/mira/manifest.C:249\n \tcbz\tr0, 333a92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x195c5e>\n@@ -1661074,95 +1661074,95 @@\n \tldr.w\tlr, [pc, #88]\t@ 334730 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1968fc>\n \tmov\tr0, r5\n \tldr\tr1, [pc, #88]\t@ (334734 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x196900>)\n \tldr\tr5, [sp, #48]\t@ 0x30\n \tldr.w\tr2, [r5, lr]\n \tldr\tr1, [r5, r1]\n \tblx\tb700 <__cxa_throw@plt>\n-\tcmp\tlr, pc\n+\tmov\tr6, r0\n \tmovs\tr6, r1\n-\tcmp\tip, pc\n+\tmov\tr4, r0\n \tmovs\tr6, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tcmp\tr2, lr\n+\tcmp\tr2, pc\n \tmovs\tr6, r1\n-\tcmp\tr2, lr\n+\tcmp\tr2, pc\n \tmovs\tr6, r1\n-\tcmp\tr4, sp\n+\tcmp\tr4, lr\n \tmovs\tr6, r1\n-\tldr\tr7, [sp, #864]\t@ 0x360\n+\tldr\tr7, [sp, #896]\t@ 0x380\n \tmovs\tr4, r1\n-\tadd\tip, lr\n+\tadd\tip, pc\n \tmovs\tr6, r1\n-\tadd\tr8, lr\n+\tadd\tr8, pc\n \tmovs\tr6, r1\n-\tsubs\tr2, #86\t@ 0x56\n+\tsubs\tr2, #94\t@ 0x5e\n \tmovs\tr6, r1\n-\tadd\tr8, r9\n+\tadd\tr8, sl\n \tmovs\tr6, r1\n-\tadd\tip, r8\n+\tadd\tip, r9\n \tmovs\tr6, r1\n-\tmov\tsl, r9\n+\tmov\tsl, sl\n \tmovs\tr6, r1\n-\tsubs\tr7, #102\t@ 0x66\n+\tsubs\tr7, #110\t@ 0x6e\n \tmovs\tr6, r1\n-\tsubs\tr7, #88\t@ 0x58\n+\tsubs\tr7, #96\t@ 0x60\n \tmovs\tr6, r1\n-\tmuls\tr2, r1\n+\tmuls\tr2, r2\n \tmovs\tr6, r1\n-\tcmp\tr8, r7\n+\tcmp\tr8, r8\n \tmovs\tr6, r1\n-\tsubs\tr7, #92\t@ 0x5c\n+\tsubs\tr7, #100\t@ 0x64\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmuls\tr4, r0\n+\tmuls\tr4, r1\n \tmovs\tr6, r1\n-\tldr\tr4, [pc, #120]\t@ (3347b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x196984>)\n+\tldr\tr4, [pc, #152]\t@ (3347d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1969a4>)\n \tmovs\tr6, r1\n-\tldr\tr4, [pc, #272]\t@ (334854 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x196a20>)\n+\tldr\tr4, [pc, #304]\t@ (334874 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x196a40>)\n \tmovs\tr6, r1\n-\tsubs\tr6, #124\t@ 0x7c\n+\tsubs\tr6, #132\t@ 0x84\n \tmovs\tr6, r1\n-\tsubs\tr6, #110\t@ 0x6e\n+\tsubs\tr6, #118\t@ 0x76\n \tmovs\tr6, r1\n-\tnegs\tr0, r4\n+\tnegs\tr0, r5\n \tmovs\tr6, r1\n-\tadd\tsl, r5\n+\tadd\tsl, r6\n \tmovs\tr6, r1\n-\tsubs\tr6, #114\t@ 0x72\n+\tsubs\tr6, #122\t@ 0x7a\n \tmovs\tr6, r1\n-\tcmp\tr4, r4\n+\tcmp\tr4, r5\n \tmovs\tr6, r1\n-\ttst\tr4, r0\n+\ttst\tr4, r1\n \tmovs\tr6, r1\n-\tsubs\tr3, #198\t@ 0xc6\n+\tsubs\tr3, #206\t@ 0xce\n \tmovs\tr6, r1\n-\tsubs\tr3, #184\t@ 0xb8\n+\tsubs\tr3, #192\t@ 0xc0\n \tmovs\tr6, r1\n-\tsubs\tr7, #170\t@ 0xaa\n+\tsubs\tr7, #178\t@ 0xb2\n \tmovs\tr6, r1\n-\tasrs\tr0, r3\n+\tasrs\tr0, r4\n \tmovs\tr6, r1\n-\tsubs\tr3, #186\t@ 0xba\n+\tsubs\tr3, #194\t@ 0xc2\n \tmovs\tr6, r1\n-\tsubs\tr3, #6\n+\tsubs\tr3, #14\n \tmovs\tr6, r1\n-\tsubs\tr2, #248\t@ 0xf8\n+\tsubs\tr3, #0\n \tmovs\tr6, r1\n-\tsubs\tr6, #234\t@ 0xea\n+\tsubs\tr6, #242\t@ 0xf2\n \tmovs\tr6, r1\n-\tsubs\tr7, #32\n+\tsubs\tr7, #40\t@ 0x28\n \tmovs\tr6, r1\n-\tsubs\tr2, #250\t@ 0xfa\n+\tsubs\tr3, #2\n \tmovs\tr6, r1\n-\tadds\tr3, #226\t@ 0xe2\n+\tadds\tr3, #234\t@ 0xea\n \tmovs\tr6, r1\n \tldc\t0, cr0, [sl], {25}\n \t\t\t@ instruction: 0xebf80019\n \trsbs\tr0, r2, r9, lsr #32\n \tsub.w\tr0, ip, r9, lsr #32\n \t\t\t@ instruction: 0xeb8e0019\n \tsbcs.w\tr0, r4, r9, lsr #32\n@@ -1661170,33 +1661170,33 @@\n \t\t\t@ instruction: 0xeaac0019\n \t\t\t@ instruction: 0xe9b00019\n \t\t\t@ instruction: 0xe99c0019\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tldr\tr2, [sp, #304]\t@ 0x130\n \tmovs\tr7, r2\n-\tsubs\tr4, #238\t@ 0xee\n+\tsubs\tr4, #246\t@ 0xf6\n \tmovs\tr6, r1\n \t\t\t@ instruction: 0xe8d00019\n \tlsls\tr4, r4, #22\n \tmovs\tr0, r0\n \tldr\tr2, [sp, #120]\t@ 0x78\n \tmovs\tr7, r2\n-\tsubs\tr4, #160\t@ 0xa0\n+\tsubs\tr4, #168\t@ 0xa8\n \tmovs\tr6, r1\n \tstmia.w\tr4!, {r0, r3, r4}\n \tldr\tr1, [sp, #976]\t@ 0x3d0\n \tmovs\tr7, r2\n-\tadds\tr6, #88\t@ 0x58\n+\tadds\tr6, #96\t@ 0x60\n \tmovs\tr6, r1\n-\tadds\tr6, #76\t@ 0x4c\n+\tadds\tr6, #84\t@ 0x54\n \tmovs\tr6, r1\n-\tsubs\tr5, #48\t@ 0x30\n+\tsubs\tr5, #56\t@ 0x38\n \tmovs\tr6, r1\n-\tadds\tr6, #108\t@ 0x6c\n+\tadds\tr6, #116\t@ 0x74\n \tmovs\tr6, r1\n /usr/include/c++/10/bits/basic_string.h:6187\n \tldr.w\tr1, [pc, #3260]\t@ 3354a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197674>\n \tldr\tr0, [sp, #44]\t@ 0x2c\n \tadd\tr1, pc\n \tblx\tbb30 , std::allocator >::compare(char const*) const@plt>\n ./src/mira/manifest.C:328\n@@ -1662830,17 +1662830,17 @@\n \tb.n\t335238 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197404>\n ./src/mira/manifest.C:330\n \tldr\tr0, [pc, #292]\t@ (3355c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197790>)\n \tadd\tr0, pc\n \tadds\tr0, #4\n \tblx\tb430 <__cxa_guard_abort@plt>\n \tb.n\t335238 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197404>\n-\tsubs\tr3, #154\t@ 0x9a\n+\tsubs\tr3, #162\t@ 0xa2\n \tmovs\tr6, r1\n-\tcmp\tr5, #248\t@ 0xf8\n+\tcmp\tr6, #0\n \tmovs\tr6, r1\n \tb.n\t3351cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197398>\n \tmovs\tr1, r3\n \tb.n\t335184 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197350>\n \tmovs\tr1, r3\n \tb.n\t335154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197320>\n \tmovs\tr1, r3\n@@ -1662848,135 +1662848,135 @@\n \tmovs\tr1, r3\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tstr\tr6, [sp, #944]\t@ 0x3b0\n \tmovs\tr7, r2\n-\tsubs\tr3, #38\t@ 0x26\n+\tsubs\tr3, #46\t@ 0x2e\n \tmovs\tr6, r1\n-\tcmp\tr5, #20\n+\tcmp\tr5, #28\n \tmovs\tr6, r1\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tadds\tr3, #34\t@ 0x22\n+\tadds\tr3, #42\t@ 0x2a\n \tmovs\tr6, r1\n-\tadds\tr3, #20\n+\tadds\tr3, #28\n \tmovs\tr6, r1\n-\tsubs\tr1, #206\t@ 0xce\n+\tsubs\tr1, #214\t@ 0xd6\n \tmovs\tr6, r1\n-\tsubs\tr1, #204\t@ 0xcc\n+\tsubs\tr1, #212\t@ 0xd4\n \tmovs\tr6, r1\n-\tstr\tr2, [r1, #104]\t@ 0x68\n+\tstr\tr6, [r2, #104]\t@ 0x68\n \tmovs\tr3, r1\n-\tadds\tr2, #252\t@ 0xfc\n+\tadds\tr3, #4\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr1, #190\t@ 0xbe\n+\tsubs\tr1, #198\t@ 0xc6\n \tmovs\tr6, r1\n-\tsubs\tr1, #184\t@ 0xb8\n+\tsubs\tr1, #192\t@ 0xc0\n \tmovs\tr6, r1\n-\tsubs\tr1, #174\t@ 0xae\n+\tsubs\tr1, #182\t@ 0xb6\n \tmovs\tr6, r1\n-\tadds\tr1, #128\t@ 0x80\n+\tadds\tr1, #136\t@ 0x88\n \tmovs\tr6, r1\n-\tadds\tr1, #114\t@ 0x72\n+\tadds\tr1, #122\t@ 0x7a\n \tmovs\tr6, r1\n-\tsubs\tr0, #44\t@ 0x2c\n+\tsubs\tr0, #52\t@ 0x34\n \tmovs\tr6, r1\n-\tsubs\tr0, #42\t@ 0x2a\n+\tsubs\tr0, #50\t@ 0x32\n \tmovs\tr6, r1\n-\tstr\tr0, [r5, #76]\t@ 0x4c\n+\tstr\tr4, [r6, #76]\t@ 0x4c\n \tmovs\tr3, r1\n-\tadds\tr1, #90\t@ 0x5a\n+\tadds\tr1, #98\t@ 0x62\n \tmovs\tr6, r1\n-\tadds\tr6, #132\t@ 0x84\n+\tadds\tr6, #140\t@ 0x8c\n \tmovs\tr6, r1\n \tb.n\t335a10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197bdc>\n \tmovs\tr1, r3\n \tlsls\tr4, r4, #22\n \tmovs\tr0, r0\n \tstr\tr3, [sp, #784]\t@ 0x310\n \tmovs\tr7, r2\n-\tsubs\tr0, #10\n+\tsubs\tr0, #18\n \tmovs\tr6, r1\n \tb.n\t3359bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197b88>\n \tmovs\tr1, r3\n \tstr\tr3, [sp, #568]\t@ 0x238\n \tmovs\tr7, r2\n-\tadds\tr0, #34\t@ 0x22\n+\tadds\tr0, #42\t@ 0x2a\n \tmovs\tr6, r1\n-\tadds\tr0, #20\n+\tadds\tr0, #28\n \tmovs\tr6, r1\n-\tadds\tr4, #6\n+\tadds\tr4, #14\n \tmovs\tr6, r1\n-\tadds\tr5, #212\t@ 0xd4\n+\tadds\tr5, #220\t@ 0xdc\n \tmovs\tr6, r1\n-\tstr\tr4, [r1, #56]\t@ 0x38\n+\tstr\tr0, [r3, #56]\t@ 0x38\n \tmovs\tr3, r1\n-\tcmp\tr7, #254\t@ 0xfe\n+\tadds\tr0, #6\n \tmovs\tr6, r1\n-\tadds\tr5, #50\t@ 0x32\n+\tadds\tr5, #58\t@ 0x3a\n \tmovs\tr6, r1\n-\tadds\tr6, #226\t@ 0xe2\n+\tadds\tr6, #234\t@ 0xea\n \tmovs\tr6, r1\n-\tcmp\tr6, #26\n+\tcmp\tr6, #34\t@ 0x22\n \tmovs\tr6, r1\n-\tcmp\tr6, #12\n+\tcmp\tr6, #20\n \tmovs\tr6, r1\n-\tcmp\tr6, #186\t@ 0xba\n+\tcmp\tr6, #194\t@ 0xc2\n \tmovs\tr6, r1\n-\tcmp\tr0, r2\n+\tcmp\tr0, r3\n \tmovs\tr6, r1\n-\tcmp\tr6, #14\n+\tcmp\tr6, #22\n \tmovs\tr6, r1\n-\tadds\tr5, #82\t@ 0x52\n+\tadds\tr5, #90\t@ 0x5a\n \tmovs\tr6, r1\n-\tadds\tr5, #56\t@ 0x38\n+\tadds\tr5, #64\t@ 0x40\n \tmovs\tr6, r1\n-\tcmp\tr5, #114\t@ 0x72\n+\tcmp\tr5, #122\t@ 0x7a\n \tmovs\tr6, r1\n-\tcmp\tr4, #202\t@ 0xca\n+\tcmp\tr4, #210\t@ 0xd2\n \tmovs\tr6, r1\n-\tcmp\tr4, #188\t@ 0xbc\n+\tcmp\tr4, #196\t@ 0xc4\n \tmovs\tr6, r1\n-\tadds\tr0, #174\t@ 0xae\n+\tadds\tr0, #182\t@ 0xb6\n \tmovs\tr6, r1\n-\tadds\tr0, #160\t@ 0xa0\n+\tadds\tr0, #168\t@ 0xa8\n \tmovs\tr6, r1\n-\tcmp\tr4, #176\t@ 0xb0\n+\tcmp\tr4, #184\t@ 0xb8\n \tmovs\tr6, r1\n \tlsrs\tr2, r2, #21\n \tmovs\tr3, r1\n-\tcmp\tr3, #248\t@ 0xf8\n+\tcmp\tr4, #0\n \tmovs\tr6, r1\n-\tcmp\tr3, #234\t@ 0xea\n+\tcmp\tr3, #242\t@ 0xf2\n \tmovs\tr6, r1\n-\tcmp\tr3, #216\t@ 0xd8\n+\tcmp\tr3, #224\t@ 0xe0\n \tmovs\tr6, r1\n-\teors\tr6, r5\n+\teors\tr6, r6\n \tmovs\tr6, r1\n-\tcmp\tr3, #236\t@ 0xec\n+\tcmp\tr3, #244\t@ 0xf4\n \tmovs\tr6, r1\n-\tlsrs\tr0, r2\n+\tlsrs\tr0, r3\n \tmovs\tr4, r1\n-\tlsrs\tr6, r4\n+\tlsrs\tr6, r5\n \tmovs\tr4, r1\n-\tcmp\tr3, #34\t@ 0x22\n+\tcmp\tr3, #42\t@ 0x2a\n \tmovs\tr6, r1\n-\tcmp\tr3, #20\n+\tcmp\tr3, #28\n \tmovs\tr6, r1\n-\tcmp\tr4, #44\t@ 0x2c\n+\tcmp\tr4, #52\t@ 0x34\n \tmovs\tr6, r1\n-\tadds\tr2, #172\t@ 0xac\n+\tadds\tr2, #180\t@ 0xb4\n \tmovs\tr6, r1\n-\tcmp\tr3, #28\n+\tcmp\tr3, #36\t@ 0x24\n \tmovs\tr6, r1\n \tbge.n\t3354ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1976b8>\n \tmovs\tr1, r3\n \tbls.n\t3355c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197790>\n \tmovs\tr1, r3\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [r4, #0]\n@@ -1663249,23 +1663249,23 @@\n \tb.n\t335722 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1978ee>\n \tb.n\t33578c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197958>\n \tnop\n \tbhi.n\t3356b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197884>\n \tmovs\tr1, r3\n \tbhi.n\t3358a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x197a70>\n \tmovs\tr1, r3\n-\tmovs\tr5, #236\t@ 0xec\n+\tmovs\tr5, #244\t@ 0xf4\n \tmovs\tr6, r1\n-\tmovs\tr5, #224\t@ 0xe0\n+\tmovs\tr5, #232\t@ 0xe8\n \tmovs\tr6, r1\n-\tadds\tr0, #200\t@ 0xc8\n+\tadds\tr0, #208\t@ 0xd0\n \tmovs\tr6, r1\n-\tadds\tr0, #204\t@ 0xcc\n+\tadds\tr0, #212\t@ 0xd4\n \tmovs\tr6, r1\n-\tmovs\tr5, #236\t@ 0xec\n+\tmovs\tr5, #244\t@ 0xf4\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n Manifest::loadManifestFile(std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/mira/manifest.C:118\n@@ -1663834,27 +1663834,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tr6, #50\t@ 0x32\n+\tcmp\tr6, #58\t@ 0x3a\n \tmovs\tr6, r1\n \tstrb\tr6, [r5, #19]\n \tmovs\tr7, r2\n-\tcmp\tr5, #154\t@ 0x9a\n+\tcmp\tr5, #162\t@ 0xa2\n \tmovs\tr6, r1\n-\tcmp\tr6, #30\n+\tcmp\tr6, #38\t@ 0x26\n \tmovs\tr6, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcmp\tr4, #250\t@ 0xfa\n+\tcmp\tr5, #2\n \tmovs\tr6, r1\n boost::detail::sp_counted_impl_p, std::allocator > >, char, boost::regex_traits > > >::~sp_counted_impl_p():\n /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:64\n \tbx\tlr\n \tnop\n boost::detail::sp_counted_impl_p, std::allocator > >, char, boost::regex_traits > > >::get_deleter(std::type_info const&):\n /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:95\n@@ -1664130,19 +1664130,19 @@\n \tmovs\tr0, r0\n \tstrb\tr2, [r4, #10]\n \tmovs\tr7, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tstrb\tr4, [r3, #9]\n \tmovs\tr7, r2\n-\tadds\tr7, #236\t@ 0xec\n+\tadds\tr7, #248\t@ 0xf8\n \tmovs\tr3, r1\n-\tadds\tr7, #224\t@ 0xe0\n+\tadds\tr7, #236\t@ 0xec\n \tmovs\tr3, r1\n-\tldrsh\tr0, [r6, r6]\n+\tldrsh\tr0, [r7, r6]\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1664326,19 +1664326,19 @@\n \tmovs\tr0, r0\n \tstrb\tr6, [r5, #4]\n \tmovs\tr7, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tstrb\tr0, [r5, #3]\n \tmovs\tr7, r2\n-\tadds\tr6, #120\t@ 0x78\n+\tadds\tr6, #132\t@ 0x84\n \tmovs\tr3, r1\n-\tadds\tr6, #108\t@ 0x6c\n+\tadds\tr6, #120\t@ 0x78\n \tmovs\tr3, r1\n-\tldrsh\tr4, [r7, r0]\n+\tldrsh\tr4, [r0, r1]\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1664956,19 +1664956,19 @@\n \tmovs\tr7, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldr\tr6, [r4, #72]\t@ 0x48\n \tmovs\tr7, r2\n \tldr\tr6, [r5, #68]\t@ 0x44\n \tmovs\tr7, r2\n-\tadds\tr2, #6\n+\tadds\tr2, #18\n \tmovs\tr3, r1\n-\tadds\tr1, #250\t@ 0xfa\n+\tadds\tr2, #6\n \tmovs\tr3, r1\n-\tldr\tr2, [r1, r7]\n+\tldr\tr2, [r2, r7]\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1665646,15 +1665646,15 @@\n \tmovw\tr4, #65512\t@ 0xffe8\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t3368da , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x198aa6>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (336904 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x198ad0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tcmp\tr4, #82\t@ 0x52\n+\tcmp\tr4, #94\t@ 0x5e\n \tmovs\tr3, r1\n bool boost::char_separator >::operator()<__gnu_cxx::__normal_iterator, std::allocator > >, std::__cxx11::basic_string, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator > >&, __gnu_cxx::__normal_iterator, std::allocator > >, std::__cxx11::basic_string, std::allocator >&):\n /usr/include/boost/token_functions.hpp:460\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr9, r3\n /usr/include/boost/token_functions.hpp:471\n \tldr\tr3, [r0, #52]\t@ 0x34\n@@ -1666384,19 +1666384,19 @@\n \tmovs\tr2, #54\t@ 0x36\n \tldr\tr1, [pc, #16]\t@ (336dd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x198fa4>)\n \tldr\tr0, [pc, #16]\t@ (336ddc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x198fa8>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tsubs\tr2, r4, r5\n+\tsubs\tr2, r5, r5\n \tmovs\tr6, r1\n-\tadds\tr4, r3, #1\n+\tadds\tr4, r4, #1\n \tmovs\tr6, r1\n-\tadds\tr2, r0, #2\n+\tadds\tr2, r1, #2\n \tmovs\tr6, r1\n boost::tokenizer >, __gnu_cxx::__normal_iterator, std::allocator > >, std::__cxx11::basic_string, std::allocator > >::end() const:\n /usr/include/boost/tokenizer.hpp:87\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr2, [pc, #524]\t@ (336ff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1991c0>)\n \tsub\tsp, #76\t@ 0x4c\n \tldr\tr3, [pc, #524]\t@ (336ff8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1991c4>)\n@@ -1667038,19 +1667038,19 @@\n \tmov.w\tr2, #728\t@ 0x2d8\n \tldr\tr1, [pc, #16]\t@ (337244 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199410>)\n \tldr\tr0, [pc, #16]\t@ (337248 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199414>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tsub\tsp, #88\t@ 0x58\n+\tsub\tsp, #120\t@ 0x78\n \tmovs\tr4, r1\n-\tcbz\tr4, 337276 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199442>\n+\tcbz\tr4, 337278 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199444>\n \tmovs\tr4, r1\n-\tcbz\tr6, 337284 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199450>\n+\tcbz\tr6, 337286 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199452>\n \tmovs\tr4, r1\n boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >::operator[](int) const:\n /usr/include/boost/regex/v4/match_results.hpp:228\n \tpush\t{r4, lr}\n \tmov\tr2, r1\n \tsub\tsp, #8\n /usr/include/c++/10/bits/stl_iterator.h:979\n@@ -1667454,19 +1667454,19 @@\n \tldr\tr1, [pc, #16]\t@ (3374f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1996bc>)\n \tldr\tr0, [pc, #20]\t@ (3374f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1996c0>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n \tnop\n-\tasrs\tr0, r7, #21\n+\tasrs\tr0, r0, #22\n \tmovs\tr6, r1\n-\tasrs\tr6, r3, #29\n+\tasrs\tr6, r4, #29\n \tmovs\tr6, r1\n-\tasrs\tr4, r1, #30\n+\tasrs\tr4, r2, #30\n \tmovs\tr6, r1\n boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >::named_subexpression(char const*, char const*) const:\n /usr/include/boost/regex/v4/match_results.hpp:242\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tldr\tr0, [pc, #1008]\t@ (3378f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199abc>)\n \tldr\tr3, [pc, #1008]\t@ (3378f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199ac0>)\n@@ -1668050,19 +1668050,19 @@\n \tbl\tc97c \n \tldrh\tr4, [r3, r1]\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsb\tr4, [r7, r7]\n \tmovs\tr7, r2\n-\tasrs\tr2, r3, #14\n+\tasrs\tr2, r4, #14\n \tmovs\tr6, r1\n-\tadd\tr3, sp, #80\t@ 0x50\n+\tadd\tr3, sp, #112\t@ 0x70\n \tmovs\tr4, r1\n-\tadd\tr3, sp, #248\t@ 0xf8\n+\tadd\tr3, sp, #280\t@ 0x118\n \tmovs\tr4, r1\n boost::re_detail_107400::basic_regex_formatter, std::allocator > >, boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >, boost::regex_traits_wrapper > >, __gnu_cxx::__normal_iterator, std::allocator > > >::handle_perl_verb(bool):\n /usr/include/boost/regex/v4/regex_format.hpp:393\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tldr.w\tr9, [pc, #700]\t@ 337bcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x199d98>\n /usr/include/c++/10/bits/stl_iterator.h:1100\n \tldrd\tr5, r7, [r0, #12]\n@@ -1669017,21 +1669017,21 @@\n \tcbz\tr7, 337fb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a180>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tmov\tr1, r8\n \tmov\tr0, r7\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tlsrs\tr0, r3, #23\n+\tlsrs\tr0, r4, #23\n \tmovs\tr6, r1\n-\tlsrs\tr6, r4, #18\n+\tlsrs\tr6, r5, #18\n \tmovs\tr6, r1\n-\tlsrs\tr4, r7, #30\n+\tlsrs\tr4, r0, #31\n \tmovs\tr6, r1\n-\tldc\t0, cr0, [ip], {10}\n+\tstc\t0, cr0, [r8], #40\t@ 0x28\n boost::re_detail_107400::basic_regex_formatter, std::allocator > >, boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >, boost::regex_traits_wrapper > >, __gnu_cxx::__normal_iterator, std::allocator > > >::format_all():\n /usr/include/boost/regex/v4/regex_format.hpp:225\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n /usr/include/boost/regex/v4/regex_format.hpp:228\n \tldrd\tr3, r0, [r0, #12]\n /usr/include/boost/regex/v4/regex_format.hpp:225\n@@ -1669342,25 +1669342,25 @@\n \tldr\tr0, [pc, #32]\t@ (3381dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a3a8>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n /usr/include/boost/regex/v4/match_results.hpp:231\n \tbl\tc97c \n-\tlsrs\tr2, r0, #24\n+\tlsrs\tr2, r1, #24\n \tmovs\tr6, r1\n-\tlsrs\tr4, r2, #11\n+\tlsrs\tr4, r3, #11\n \tmovs\tr6, r1\n-\tlsrs\tr6, r4, #31\n+\tlsrs\tr6, r5, #31\n \tmovs\tr6, r1\n-\tadd\tr1, pc, #72\t@ (adr r1, 338220 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a3ec>)\n+\tadd\tr1, pc, #104\t@ (adr r1, 338240 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a40c>)\n \tmovs\tr4, r1\n-\tadd\tr2, pc, #224\t@ (adr r2, 3382bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a488>)\n+\tadd\tr2, pc, #256\t@ (adr r2, 3382dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a4a8>)\n \tmovs\tr4, r1\n-\tadd\tr2, pc, #392\t@ (adr r2, 338368 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a534>)\n+\tadd\tr2, pc, #424\t@ (adr r2, 338388 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a554>)\n \tmovs\tr4, r1\n boost::re_detail_107400::basic_regex_formatter, std::allocator > >, boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >, boost::regex_traits_wrapper > >, __gnu_cxx::__normal_iterator, std::allocator > > >::format_until_scope_end():\n /usr/include/boost/regex/v4/regex_format.hpp:755\n \tpush\t{r4, r5, lr}\n \tmov\tr4, r0\n \tsub\tsp, #12\n /usr/include/boost/regex/v4/regex_format.hpp:759\n@@ -1669477,19 +1669477,19 @@\n \tmov.w\tr2, #728\t@ 0x2d8\n \tldr\tr1, [pc, #16]\t@ (3382a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a46c>)\n \tldr\tr0, [pc, #16]\t@ (3382a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a470>)\n \tadd\tr3, pc\n \tadd\tr1, pc\n \tadd\tr0, pc\n \tblx\tb2c8 <__assert_fail@plt>\n-\tadd\tr0, pc, #232\t@ (adr r0, 338388 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a554>)\n+\tadd\tr0, pc, #264\t@ (adr r0, 3383a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a574>)\n \tmovs\tr4, r1\n-\tadd\tr1, pc, #384\t@ (adr r1, 338424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a5f0>)\n+\tadd\tr1, pc, #416\t@ (adr r1, 338444 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a610>)\n \tmovs\tr4, r1\n-\tadd\tr1, pc, #552\t@ (adr r1, 3384d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a69c>)\n+\tadd\tr1, pc, #584\t@ (adr r1, 3384f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19a6bc>)\n \tmovs\tr4, r1\n boost::re_detail_107400::basic_regex_formatter, std::allocator > >, boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >, boost::regex_traits_wrapper > >, __gnu_cxx::__normal_iterator, std::allocator > > >::format_conditional():\n /usr/include/boost/regex/v4/regex_format.hpp:670\n \tldr.w\tr2, [pc, #2672]\t@ 338d1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19aee8>\n \tldr.w\tr3, [pc, #2672]\t@ 338d20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19aeec>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1670872,25 +1670872,25 @@\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr3, [pc, #936]\t@ (3390d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19b29c>)\n \tmovs\tr7, r2\n \tldr\tr3, [pc, #656]\t@ (338fbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19b188>)\n \tmovs\tr7, r2\n-\t\t\t@ instruction: 0xe85e000a\n+\tstrd\tr0, r0, [sl], #-40\t@ 0x28\n \tldr\tr3, [pc, #448]\t@ (338ef4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19b0c0>)\n \tmovs\tr7, r2\n \tldr\tr3, [pc, #80]\t@ (338d88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19af54>)\n \tmovs\tr7, r2\n-\tsvc\t108\t@ 0x6c\n+\tsvc\t120\t@ 0x78\n \tmovs\tr2, r1\n-\tvaddl.u16\tq0, d4, d13\n-\tstr\tr7, [sp, #56]\t@ 0x38\n+\tvaddl.u16\tq0, d12, d13\n+\tstr\tr7, [sp, #88]\t@ 0x58\n \tmovs\tr4, r1\n-\tstr\tr7, [sp, #224]\t@ 0xe0\n+\tstr\tr7, [sp, #256]\t@ 0x100\n \tmovs\tr4, r1\n boost::re_detail_107400::string_out_iterator, std::allocator > > boost::regex_replace, std::allocator > >, __gnu_cxx::__normal_iterator, std::allocator > >, boost::regex_traits >, char, std::__cxx11::basic_string, std::allocator > >(boost::re_detail_107400::string_out_iterator, std::allocator > >, __gnu_cxx::__normal_iterator, std::allocator > >, __gnu_cxx::__normal_iterator, std::allocator > >, boost::basic_regex > > const&, std::__cxx11::basic_string, std::allocator >, boost::regex_constants::_match_flags):\n /usr/include/boost/regex/v4/regex_replace.hpp:39\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r2\n \tmov\tr8, r3\n \tvpush\t{d8}\n@@ -1671893,32 +1671893,32 @@\n \tmovs\tr0, r0\n \tasrs\tr2, r7\n \tmovs\tr7, r2\n \tlsrs\tr0, r5, #3\n \tmovs\tr0, r0\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tadd\tr1, sp, #80\t@ 0x50\n+\tadd\tr1, sp, #112\t@ 0x70\n \tmovs\tr4, r1\n-\tldr\tr1, [sp, #136]\t@ 0x88\n+\tldr\tr1, [sp, #168]\t@ 0xa8\n \tmovs\tr4, r1\n-\tldr\tr1, [sp, #304]\t@ 0x130\n+\tldr\tr1, [sp, #336]\t@ 0x150\n \tmovs\tr4, r1\n-\tstr\tr7, [sp, #384]\t@ 0x180\n+\tstr\tr7, [sp, #416]\t@ 0x1a0\n \tmovs\tr4, r1\n-\tldrh\tr6, [r4, #62]\t@ 0x3e\n+\tldrh\tr6, [r5, #62]\t@ 0x3e\n \tmovs\tr4, r1\n-\tstr\tr0, [sp, #64]\t@ 0x40\n+\tstr\tr0, [sp, #96]\t@ 0x60\n \tmovs\tr4, r1\n \tldmia\tr1!, {r3, r5, r6, r7}\n \tmovs\tr2, r1\n-\tldc2l\t0, cr0, [r8, #-52]\t@ 0xffffffcc\n-\tldrh\tr2, [r1, #62]\t@ 0x3e\n+\tstc2l\t0, cr0, [r0, #-52]!\t@ 0xffffffcc\n+\tldrh\tr2, [r2, #62]\t@ 0x3e\n \tmovs\tr4, r1\n-\tcdp2\t0, 11, cr0, cr4, cr13, {0}\n+\tcdp2\t0, 11, cr0, cr12, cr13, {0}\n std::__cxx11::basic_string, std::allocator > boost::regex_replace >, char, std::__cxx11::basic_string, std::allocator > >(std::__cxx11::basic_string, std::allocator > const&, boost::basic_regex > > const&, std::__cxx11::basic_string, std::allocator >, boost::regex_constants::_match_flags):\n /usr/include/boost/regex/v4/regex_replace.hpp:73\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr\tr6, [pc, #248]\t@ (3395fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19b7c8>)\n \tsub\tsp, #52\t@ 0x34\n \tldr\tr5, [pc, #248]\t@ (339600 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19b7cc>)\n@@ -1673189,67 +1673189,67 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \t...\n \tsubs\tr1, #64\t@ 0x40\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstc2l\t0, cr0, [r2, #52]!\t@ 0x34\n+\tstc2l\t0, cr0, [sl, #52]!\t@ 0x34\n \tsubs\tr1, #16\n \tmovs\tr7, r2\n-\tldc2\t0, cr0, [r8, #52]\t@ 0x34\n-\tstc2l\t0, cr0, [r0, #-52]!\t@ 0xffffffcc\n-\tldc2\t0, cr0, [r4, #-52]\t@ 0xffffffcc\n-\tldc2l\t0, cr0, [r4], {13}\n-\tstc2l\t0, cr0, [r4], {13}\n+\tstc2\t0, cr0, [r0, #52]!\t@ 0x34\n+\tstc2l\t0, cr0, [r8, #-52]!\t@ 0xffffffcc\n+\tldc2\t0, cr0, [ip, #-52]\t@ 0xffffffcc\n+\tldc2l\t0, cr0, [ip], {13}\n+\tstc2l\t0, cr0, [ip], {13}\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tmrrc2\t0, 0, r0, r4, cr13\n-\tldc2\t0, cr0, [r0], #-52\t@ 0xffffffcc\n-\t\t\t@ instruction: 0xfbd4000d\n-\tumull\tr0, r0, r4, sp\n+\tmrrc2\t0, 0, r0, ip, cr13\n+\tldc2\t0, cr0, [r8], #-52\t@ 0xffffffcc\n+\t\t\t@ instruction: 0xfbdc000d\n+\tumull\tr0, r0, ip, sp\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n-\tsmmla\tr0, r4, sp, r0\n+\tsmmla\tr0, ip, sp, r0\n \tadds\tr6, #24\n \tmovs\tr7, r2\n-\t\t\t@ instruction: 0xfbfc000d\n+\tstc2\t0, cr0, [r4], {13}\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbeq.n\t339ec0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19c08c>\n+\tbeq.n\t339ed8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19c0a4>\n \tmovs\tr2, r1\n-\tbeq.n\t339ebc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19c088>\n+\tbeq.n\t339ed4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19c0a0>\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldmia\tr7!, {r2, r5, r6}\n+\tldmia\tr7!, {r4, r5, r6}\n \tmovs\tr2, r1\n-\tldmia\tr7!, {r1, r5, r6}\n+\tldmia\tr7!, {r1, r2, r3, r5, r6}\n \tmovs\tr2, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tldmia\tr6!, {r1, r2, r3, r4}\n+\tldmia\tr6!, {r1, r3, r5}\n \tmovs\tr2, r1\n-\tldmia\tr6!, {r2, r3, r4}\n+\tldmia\tr6!, {r3, r5}\n \tmovs\tr2, r1\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n /usr/include/c++/10/sstream:584\n \tmov\tr0, fp\n /usr/include/c++/10/ostream:93\n \tadd.w\tr8, sp, #248\t@ 0xf8\n@@ -1674163,54 +1674163,54 @@\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr7, #26\n \tmovs\tr7, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n-\tsubs\tr5, #100\t@ 0x64\n+\tsubs\tr5, #108\t@ 0x6c\n \tmovs\tr4, r1\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf2b6000d\n-\t\t\t@ instruction: 0xf378000d\n+\t\t\t@ instruction: 0xf2be000d\n+\tusat\tr0, #13, r0\n \tcmp\tr5, #84\t@ 0x54\n \tmovs\tr7, r2\n-\t\t\t@ instruction: 0xf22c000d\n+\t\t\t@ instruction: 0xf234000d\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r1, r2, r4, r5, r7}\n+\tldmia\tr0!, {r1, r6, r7}\n \tmovs\tr2, r1\n-\tldmia\tr0!, {r2, r4, r5, r7}\n+\tldmia\tr0!, {r6, r7}\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r4, r5, r6}\n+\tstmia\tr7!, {r2, r3, r4, r5, r6}\n \tmovs\tr2, r1\n-\tstmia\tr7!, {r1, r2, r3, r5, r6}\n+\tstmia\tr7!, {r1, r3, r4, r5, r6}\n \tmovs\tr2, r1\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r1, r2, r3, r5}\n+\tstmia\tr6!, {r1, r3, r4, r5}\n \tmovs\tr2, r1\n-\tstmia\tr6!, {r2, r3, r5}\n+\tstmia\tr6!, {r3, r4, r5}\n \tmovs\tr2, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #104\t@ 0x68\n@@ -1674516,17 +1674516,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr4!, {r4}\n+\tstmia\tr4!, {r2, r3, r4}\n \tmovs\tr2, r1\n-\tstmia\tr4!, {r2, r3}\n+\tstmia\tr4!, {r3, r4}\n \tmovs\tr2, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1675366,68 +1675366,68 @@\n \tmovs\tr7, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr5, #146\t@ 0x92\n \tmovs\tr7, r2\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tlsrs\tr2, r7, #17\n+\tlsrs\tr2, r0, #18\n \tmovs\tr4, r1\n-\tadd.w\tr0, ip, sp\n-\tadd\tr6, sp, #432\t@ 0x1b0\n+\tadds.w\tr0, r4, sp\n+\tadd\tr6, sp, #464\t@ 0x1d0\n \tmovs\tr5, r1\n-\tldrd\tr0, r0, [lr, #52]!\t@ 0x34\n-\t\t\t@ instruction: 0xead0000d\n-\tadd\tr6, sp, #104\t@ 0x68\n+\tand.w\tr0, r6, sp\n+\t\t\t@ instruction: 0xead8000d\n+\tadd\tr6, sp, #136\t@ 0x88\n \tmovs\tr5, r1\n-\tstrd\tr0, r0, [r4, #52]\t@ 0x34\n+\tstrd\tr0, r0, [ip, #52]\t@ 0x34\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n-\tldrd\tr0, r0, [sl, #-52]!\t@ 0x34\n+\t\t\t@ instruction: 0xe982000d\n \tmovs\tr4, #14\n \tmovs\tr7, r2\n-\tldrd\tr0, r0, [r8, #52]\t@ 0x34\n-\t\t\t@ instruction: 0xe8dc000d\n+\tstrd\tr0, r0, [r0, #52]!\t@ 0x34\n+\tstrd\tr0, r0, [r4], #52\t@ 0x34\n \tmovs\tr3, #172\t@ 0xac\n \tmovs\tr7, r2\n-\tadd\tr4, sp, #912\t@ 0x390\n+\tadd\tr4, sp, #944\t@ 0x3b0\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsev\n-\tmovs\tr2, r1\n-\titt\tcc\n-\tmovcc\tr2, r1\n-\tlsrcc\tr4, r4, #31\n+\tite\tmi\n+\tmovmi\tr2, r1\n+\tit\tmi\t@ unpredictable \n+\tmovmi\tr2, r1\n+\tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tpop\t{r3, r4, r5, r6, r7, pc}\n+\tbkpt\t0x0004\n \tmovs\tr2, r1\n-\tpop\t{r1, r2, r4, r5, r6, r7, pc}\n+\tbkpt\t0x0002\n \tmovs\tr2, r1\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #112\t@ 0x70\n+\tadd\tr2, sp, #144\t@ 0x90\n \tmovs\tr5, r1\n-\tpop\t{r1, r5, r6}\n+\tpop\t{r1, r2, r3, r5, r6}\n \tmovs\tr2, r1\n-\tpop\t{r5, r6}\n+\tpop\t{r2, r3, r5, r6}\n \tmovs\tr2, r1\n /usr/include/c++/10/sstream:584\n \tmov\tr0, sl\n /usr/include/c++/10/ostream:93\n \tadd.w\tfp, sp, #248\t@ 0xf8\n /usr/include/c++/10/sstream:584\n \tbl\t15970 , std::allocator >::~basic_stringbuf()@@Base>\n@@ -1677059,83 +1677059,83 @@\n \tmovs\tr0, r0\n \tadds\tr6, r0, #6\n \tmovs\tr7, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsrs\tr4, r6, #3\n \tmovs\tr0, r0\n-\tb.n\t33be3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e008>\n+\tb.n\t33be4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e018>\n \tmovs\tr5, r1\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n-\tb.n\t33bdb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19df7c>\n+\tb.n\t33bdc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19df8c>\n \tmovs\tr5, r1\n-\tb.n\t33bec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e094>\n+\tb.n\t33bed8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e0a4>\n \tmovs\tr5, r1\n-\tsvc\t36\t@ 0x24\n+\tsvc\t44\t@ 0x2c\n \tmovs\tr5, r1\n-\tcmp\tr0, #130\t@ 0x82\n+\tcmp\tr0, #138\t@ 0x8a\n \tmovs\tr4, r1\n-\tcmp\tr0, #88\t@ 0x58\n+\tcmp\tr0, #96\t@ 0x60\n \tmovs\tr4, r1\n-\tcmp\tr0, #60\t@ 0x3c\n+\tcmp\tr0, #68\t@ 0x44\n \tmovs\tr4, r1\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tlsls\tr4, r4, #2\n+\tlsls\tr4, r5, #2\n \tmovs\tr4, r1\n-\tudf\t#198\t@ 0xc6\n+\tudf\t#206\t@ 0xce\n \tmovs\tr5, r1\n \tadds\tr4, r2, r2\n \tmovs\tr7, r2\n-\tble.n\t33bde0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19dfac>\n+\tble.n\t33bdf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19dfbc>\n \tmovs\tr5, r1\n-\tadd\tr1, pc, #424\t@ (adr r1, 33bf54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e120>)\n+\tadd\tr1, pc, #456\t@ (adr r1, 33bf74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e140>)\n \tmovs\tr5, r1\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbz\tr0, 33be28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19dff4>\n+\tcbz\tr4, 33be2a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19dff6>\n \tmovs\tr2, r1\n-\tcbz\tr2, 33be2a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19dff6>\n+\tcbz\tr6, 33be2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19dff8>\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsxth\tr4, r4\n+\tsxth\tr0, r6\n \tmovs\tr2, r1\n-\tsxth\tr6, r3\n+\tsxth\tr2, r5\n \tmovs\tr2, r1\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n-\tsub\tsp, #312\t@ 0x138\n+\tsub\tsp, #360\t@ 0x168\n \tmovs\tr2, r1\n-\tsub\tsp, #296\t@ 0x128\n+\tsub\tsp, #344\t@ 0x158\n \tmovs\tr2, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tbhi.n\t33bec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e094>\n+\tbhi.n\t33bed8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e0a4>\n \tmovs\tr5, r1\n-\tstr\tr6, [sp, #824]\t@ 0x338\n+\tstr\tr6, [sp, #856]\t@ 0x358\n \tmovs\tr5, r1\n-\tadd\tr7, pc, #952\t@ (adr r7, 33c1b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e380>)\n+\tadd\tr7, pc, #984\t@ (adr r7, 33c1d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e3a0>)\n \tmovs\tr5, r1\n-\tbhi.n\t33be60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e02c>\n+\tbhi.n\t33be70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e03c>\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tldr\tr5, [pc, #816]\t@ (33c138 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19e304>)\n \tadd\tr6, sp, #176\t@ 0xb0\n \tmov\tr0, r6\n@@ -1677534,27 +1677534,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #256\t@ 0x100\n+\tadd\tr5, sp, #304\t@ 0x130\n \tmovs\tr2, r1\n-\tadd\tr5, sp, #232\t@ 0xe8\n+\tadd\tr5, sp, #280\t@ 0x118\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #960\t@ 0x3c0\n+\tadd\tr3, sp, #1008\t@ 0x3f0\n \tmovs\tr2, r1\n-\tadd\tr3, sp, #944\t@ 0x3b0\n+\tadd\tr3, sp, #992\t@ 0x3e0\n \tmovs\tr2, r1\n \tlsrs\tr4, r3, #13\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tldr\tr5, [sp, #72]\t@ 0x48\n \tmovs\tr2, r1\n@@ -1678889,57 +1678889,57 @@\n \tmovs\tr0, r0\n \tlsrs\tr2, r2, #18\n \tmovs\tr7, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #31\n \tmovs\tr0, r0\n-\tbpl.n\t33cb78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19ed44>\n+\tbpl.n\t33cb88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19ed54>\n \tmovs\tr3, r1\n-\tasrs\tr4, r6, #26\n+\tasrs\tr4, r7, #26\n \tmovs\tr3, r2\n-\tbpl.n\t33cadc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19eca8>\n+\tbpl.n\t33caec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19ecb8>\n \tmovs\tr3, r1\n \tlsrs\tr4, r7, #13\n \tmovs\tr7, r2\n \tlsrs\tr4, r4, #4\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n-\tbcc.n\t33cadc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19eca8>\n+\tbcc.n\t33caec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19ecb8>\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #200\t@ (adr r5, 33ccb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19ee7c>)\n+\tadd\tr5, pc, #248\t@ (adr r5, 33cce0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19eeac>)\n \tmovs\tr2, r1\n-\tadd\tr5, pc, #176\t@ (adr r5, 33cc9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19ee68>)\n+\tadd\tr5, pc, #224\t@ (adr r5, 33cccc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19ee98>)\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #632\t@ (adr r3, 33ce78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f044>)\n+\tadd\tr3, pc, #680\t@ (adr r3, 33cea8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f074>)\n \tmovs\tr2, r1\n-\tadd\tr3, pc, #616\t@ (adr r3, 33ce6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f038>)\n+\tadd\tr3, pc, #664\t@ (adr r3, 33ce9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f068>)\n \tmovs\tr2, r1\n-\tadd\tr2, pc, #224\t@ (adr r2, 33cce8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19eeb4>)\n+\tadd\tr2, pc, #272\t@ (adr r2, 33cd18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19eee4>)\n \tmovs\tr2, r1\n-\tadd\tr2, pc, #200\t@ (adr r2, 33ccd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19eea0>)\n+\tadd\tr2, pc, #248\t@ (adr r2, 33cd04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19eed0>)\n \tmovs\tr2, r1\n \tstr\tr3, [sp, #512]\t@ 0x200\n \tmovs\tr2, r1\n \tstr\tr3, [sp, #480]\t@ 0x1e0\n \tmovs\tr2, r1\n multitag_t::dumpAsSAM(std::ostream&, std::__cxx11::basic_string, std::allocator > const&) const:\n ./src/mira/multitag.C:217\n@@ -1680038,64 +1680038,64 @@\n \tmovs\tr7, r2\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #4\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r1, r2, r4}\n+\tstmia\tr7!, {r1, r2, r3, r4}\n \tmovs\tr5, r1\n-\tstmia\tr6!, {r4, r5, r6, r7}\n+\tstmia\tr6!, {r3, r4, r5, r6, r7}\n \tmovs\tr5, r1\n-\tstmia\tr6!, {r4, r6, r7}\n+\tstmia\tr6!, {r3, r4, r6, r7}\n \tmovs\tr5, r1\n-\tstmia\tr6!, {r4, r6, r7}\n+\tstmia\tr6!, {r3, r4, r6, r7}\n \tmovs\tr5, r1\n-\tldrh\tr2, [r4, #16]\n+\tldrh\tr2, [r5, #16]\n \tmovs\tr5, r1\n-\tldrh\tr4, [r1, #16]\n+\tldrh\tr4, [r2, #16]\n \tmovs\tr5, r1\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tb.n\t33d3a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f574>\n+\tb.n\t33d3b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f584>\n \tmovs\tr3, r1\n \tvshr.u32\td16, d6, #14\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #280]\t@ 0x118\n+\tldr\tr3, [sp, #328]\t@ 0x148\n \tmovs\tr2, r1\n-\tldr\tr3, [sp, #256]\t@ 0x100\n+\tldr\tr3, [sp, #304]\t@ 0x130\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #896]\t@ 0x380\n+\tldr\tr1, [sp, #944]\t@ 0x3b0\n \tmovs\tr2, r1\n-\tldr\tr1, [sp, #888]\t@ 0x378\n+\tldr\tr1, [sp, #936]\t@ 0x3a8\n \tmovs\tr2, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr0, [sp, #272]\t@ 0x110\n+\tldr\tr0, [sp, #320]\t@ 0x140\n \tmovs\tr2, r1\n-\tldr\tr0, [sp, #256]\t@ 0x100\n+\tldr\tr0, [sp, #304]\t@ 0x130\n \tmovs\tr2, r1\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr5, sp, #160\t@ 0xa0\n \tmov\tr0, r5\n \tblx\tbcc4 \n \tldr\tr0, [pc, #700]\t@ (33d7c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f98c>)\n \tvldr\td0, [pc, #692]\t@ 33d7b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x19f984>\n@@ -1680462,17 +1680462,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #344]\t@ 0x158\n+\tstr\tr6, [sp, #392]\t@ 0x188\n \tmovs\tr2, r1\n-\tstr\tr6, [sp, #320]\t@ 0x140\n+\tstr\tr6, [sp, #368]\t@ 0x170\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1681929,68 +1681929,68 @@\n \tb.n\t33e1ba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a0386>\n \tnop\n \t...\n \t\t\t@ instruction: 0xf75c0016\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf7520016\n-\tpop\t{r1, r2, pc}\n+\tpop\t{r1, r2, r3, pc}\n \tmovs\tr5, r1\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tlsls\tr0, r1, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #4\n \tmovs\tr0, r0\n-\tldrb\tr6, [r6, #25]\n+\tldrb\tr6, [r7, #25]\n \tmovs\tr5, r1\n-\tldrb\tr0, [r4, #25]\n+\tldrb\tr0, [r5, #25]\n \tmovs\tr5, r1\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n-\tblt.n\t33e2ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a04b8>\n+\tblt.n\t33e2fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a04c8>\n \tmovs\tr3, r1\n \torrs.w\tr0, r6, #9830400\t@ 0x960000\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r1, #60]\t@ 0x3c\n+\tldrh\tr6, [r2, #60]\t@ 0x3c\n \tmovs\tr2, r1\n-\tldrh\tr4, [r0, #60]\t@ 0x3c\n+\tldrh\tr0, [r2, #60]\t@ 0x3c\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #9\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr2, [r5, #48]\t@ 0x30\n+\tldrh\tr6, [r6, #48]\t@ 0x30\n \tmovs\tr2, r1\n-\tldrh\tr6, [r4, #48]\t@ 0x30\n+\tldrh\tr2, [r6, #48]\t@ 0x30\n \tmovs\tr2, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrh\tr2, [r7, #34]\t@ 0x22\n+\tldrh\tr6, [r0, #36]\t@ 0x24\n \tmovs\tr2, r1\n-\tldrh\tr4, [r6, #34]\t@ 0x22\n+\tldrh\tr0, [r0, #36]\t@ 0x24\n \tmovs\tr2, r1\n-\tldrh\tr0, [r3, #24]\n+\tldrh\tr4, [r4, #24]\n \tmovs\tr2, r1\n-\tldrh\tr2, [r2, #24]\n+\tldrh\tr6, [r3, #24]\n \tmovs\tr2, r1\n \tldrb\tr0, [r4, #17]\n \tmovs\tr2, r1\n \tldrb\tr4, [r1, #17]\n \tmovs\tr2, r1\n multitag_t::trashContainers():\n ./src/mira/multitag.C:48\n@@ -1683429,51 +1683429,51 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \tb.n\t33ea8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a0c58>\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tite\tvs\n-\tmovvs\tr5, r1\n-\tbvc.n\t33ea44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a0c10>\n+\tite\tvc\n+\tmovvc\tr5, r1\n+\tbvs.n\t33ea44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a0c10>\n \tmovs\tr6, r2\n-\tadd\tr3, sp, #376\t@ 0x178\n+\tadd\tr3, sp, #408\t@ 0x198\n \tmovs\tr5, r1\n-\tadd\tr3, sp, #296\t@ 0x128\n+\tadd\tr3, sp, #328\t@ 0x148\n \tmovs\tr5, r1\n \tb.n\t33f61c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a17e8>\n \tmovs\tr6, r2\n-\tadd\tr2, sp, #408\t@ 0x198\n+\tadd\tr2, sp, #440\t@ 0x1b8\n \tmovs\tr5, r1\n-\tadd\tr2, sp, #304\t@ 0x130\n+\tadd\tr2, sp, #336\t@ 0x150\n \tmovs\tr5, r1\n-\tadd\tr2, sp, #200\t@ 0xc8\n+\tadd\tr2, sp, #232\t@ 0xe8\n \tmovs\tr5, r1\n-\tadd\tr2, sp, #0\n+\tadd\tr2, sp, #32\n \tmovs\tr5, r1\n-\tadd\tr2, sp, #40\t@ 0x28\n+\tadd\tr2, sp, #72\t@ 0x48\n \tmovs\tr5, r1\n-\tadd\tr1, sp, #960\t@ 0x3c0\n+\tadd\tr1, sp, #992\t@ 0x3e0\n \tmovs\tr5, r1\n-\tpop\t{r1, r3, r6, r7}\n+\tpop\t{r1, r4, r6, r7}\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadd\tr7, pc, #896\t@ (adr r7, 33f1c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1394>)\n+\tadd\tr7, pc, #928\t@ (adr r7, 33f1e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a13b4>)\n \tmovs\tr5, r1\n-\tadd\tr0, sp, #0\n+\tadd\tr0, sp, #32\n \tmovs\tr5, r1\n-\tadd\tr7, pc, #1000\t@ (adr r7, 33f238 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1404>)\n+\tadd\tr0, sp, #8\n \tmovs\tr5, r1\n-\tldr\tr0, [sp, #184]\t@ 0xb8\n+\tldr\tr0, [sp, #216]\t@ 0xd8\n \tmovs\tr3, r1\n-\tadd\tr0, sp, #232\t@ 0xe8\n+\tadd\tr0, sp, #264\t@ 0x108\n \tmovs\tr5, r1\n-\tldr\tr0, [sp, #0]\n+\tldr\tr0, [sp, #32]\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, signed char&, char const*, char const*, int, unsigned char) [clone .constprop.0]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1100]\t@ 33f2b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a147c>\n \tmov\tr5, r2\n@@ -1684009,51 +1684009,51 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \tb.n\t33f49c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1668>\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\trev\tr0, r4\n+\trev\tr0, r5\n \tmovs\tr5, r1\n \tb.n\t33f454 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1620>\n \tmovs\tr6, r2\n-\tadd\tr6, pc, #144\t@ (adr r6, 33f354 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1520>)\n+\tadd\tr6, pc, #176\t@ (adr r6, 33f374 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1540>)\n \tmovs\tr5, r1\n-\tadd\tr6, pc, #88\t@ (adr r6, 33f320 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a14ec>)\n+\tadd\tr6, pc, #120\t@ (adr r6, 33f340 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a150c>)\n \tmovs\tr5, r1\n \tudf\t#202\t@ 0xca\n \tmovs\tr6, r2\n-\tadd\tr5, pc, #216\t@ (adr r5, 33f3a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1574>)\n+\tadd\tr5, pc, #248\t@ (adr r5, 33f3c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1594>)\n \tmovs\tr5, r1\n-\tadd\tr5, pc, #112\t@ (adr r5, 33f344 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1510>)\n+\tadd\tr5, pc, #144\t@ (adr r5, 33f364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1530>)\n \tmovs\tr5, r1\n-\tadd\tr5, pc, #8\t@ (adr r5, 33f2e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a14ac>)\n+\tadd\tr5, pc, #40\t@ (adr r5, 33f300 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a14cc>)\n \tmovs\tr5, r1\n-\tadd\tr4, pc, #832\t@ (adr r4, 33f61c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a17e8>)\n+\tadd\tr4, pc, #864\t@ (adr r4, 33f63c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1808>)\n \tmovs\tr5, r1\n-\tadd\tr4, pc, #872\t@ (adr r4, 33f648 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1814>)\n+\tadd\tr4, pc, #904\t@ (adr r4, 33f668 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1834>)\n \tmovs\tr5, r1\n-\tadd\tr4, pc, #768\t@ (adr r4, 33f5e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a17b0>)\n+\tadd\tr4, pc, #800\t@ (adr r4, 33f604 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a17d0>)\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xb798\n+\t\t\t@ instruction: 0xb7a0\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #224\t@ (adr r3, 33f3d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a159c>)\n+\tadd\tr3, pc, #256\t@ (adr r3, 33f3f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a15bc>)\n \tmovs\tr5, r1\n-\tadd\tr3, pc, #352\t@ (adr r3, 33f454 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1620>)\n+\tadd\tr3, pc, #384\t@ (adr r3, 33f474 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1640>)\n \tmovs\tr5, r1\n-\tadd\tr3, pc, #328\t@ (adr r3, 33f440 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a160c>)\n+\tadd\tr3, pc, #360\t@ (adr r3, 33f460 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a162c>)\n \tmovs\tr5, r1\n-\tstr\tr3, [sp, #536]\t@ 0x218\n+\tstr\tr3, [sp, #568]\t@ 0x238\n \tmovs\tr3, r1\n-\tadd\tr3, pc, #584\t@ (adr r3, 33f548 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1714>)\n+\tadd\tr3, pc, #616\t@ (adr r3, 33f568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1734>)\n \tmovs\tr5, r1\n-\tstr\tr3, [sp, #352]\t@ 0x160\n+\tstr\tr3, [sp, #384]\t@ 0x180\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, unsigned int&, char const*, char const*, int, unsigned char) [clone .constprop.1]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1092]\t@ 33f750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a191c>\n \tmov\tr5, r2\n@@ -1684586,51 +1684586,51 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \tbgt.n\t33f7ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a19b8>\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tpush\t{r3, r4, r5, r6, lr}\n+\tpush\t{r7, lr}\n \tmovs\tr5, r1\n \tbgt.n\t33f7a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1970>\n \tmovs\tr6, r2\n-\tadd\tr1, pc, #496\t@ (adr r1, 33f954 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1b20>)\n+\tadd\tr1, pc, #528\t@ (adr r1, 33f974 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1b40>)\n \tmovs\tr5, r1\n-\tadd\tr1, pc, #440\t@ (adr r1, 33f920 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1aec>)\n+\tadd\tr1, pc, #472\t@ (adr r1, 33f940 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1b0c>)\n \tmovs\tr5, r1\n \tbge.n\t33f7b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1980>\n \tmovs\tr6, r2\n-\tadd\tr0, pc, #576\t@ (adr r0, 33f9b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1b7c>)\n+\tadd\tr0, pc, #608\t@ (adr r0, 33f9d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1b9c>)\n \tmovs\tr5, r1\n-\tadd\tr0, pc, #472\t@ (adr r0, 33f94c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1b18>)\n+\tadd\tr0, pc, #504\t@ (adr r0, 33f96c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1b38>)\n \tmovs\tr5, r1\n-\tadd\tr0, pc, #368\t@ (adr r0, 33f8e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1ab4>)\n+\tadd\tr0, pc, #400\t@ (adr r0, 33f908 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1ad4>)\n \tmovs\tr5, r1\n-\tadd\tr0, pc, #168\t@ (adr r0, 33f824 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a19f0>)\n+\tadd\tr0, pc, #200\t@ (adr r0, 33f844 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1a10>)\n \tmovs\tr5, r1\n-\tadd\tr0, pc, #208\t@ (adr r0, 33f850 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1a1c>)\n+\tadd\tr0, pc, #240\t@ (adr r0, 33f870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1a3c>)\n \tmovs\tr5, r1\n-\tadd\tr0, pc, #104\t@ (adr r0, 33f7ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a19b8>)\n+\tadd\tr0, pc, #136\t@ (adr r0, 33f80c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a19d8>)\n \tmovs\tr5, r1\n-\tuxtb\tr2, r6\n+\tuxtb\tr2, r7\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #608]\t@ 0x260\n+\tldr\tr6, [sp, #640]\t@ 0x280\n \tmovs\tr5, r1\n-\tldr\tr6, [sp, #736]\t@ 0x2e0\n+\tldr\tr6, [sp, #768]\t@ 0x300\n \tmovs\tr5, r1\n-\tldr\tr6, [sp, #712]\t@ 0x2c8\n+\tldr\tr6, [sp, #744]\t@ 0x2e8\n \tmovs\tr5, r1\n-\tldrh\tr6, [r4, #54]\t@ 0x36\n+\tldrh\tr6, [r5, #54]\t@ 0x36\n \tmovs\tr3, r1\n-\tldr\tr6, [sp, #968]\t@ 0x3c8\n+\tldr\tr6, [sp, #1000]\t@ 0x3e8\n \tmovs\tr5, r1\n-\tldrh\tr0, [r7, #52]\t@ 0x34\n+\tldrh\tr0, [r0, #54]\t@ 0x36\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, unsigned short&, char const*, char const*, int, unsigned char) [clone .constprop.0]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1092]\t@ 33fbf0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1dbc>\n \tmov\tr5, r2\n@@ -1685163,51 +1685163,51 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \tbvc.n\t33fb4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1d18>\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tsub\tsp, #352\t@ 0x160\n+\tsub\tsp, #384\t@ 0x180\n \tmovs\tr5, r1\n \tbvc.n\t33fb04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1cd0>\n \tmovs\tr6, r2\n-\tldr\tr4, [sp, #880]\t@ 0x370\n+\tldr\tr4, [sp, #912]\t@ 0x390\n \tmovs\tr5, r1\n-\tldr\tr4, [sp, #824]\t@ 0x338\n+\tldr\tr4, [sp, #856]\t@ 0x358\n \tmovs\tr5, r1\n \tbpl.n\t33fb14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a1ce0>\n \tmovs\tr6, r2\n-\tldr\tr3, [sp, #960]\t@ 0x3c0\n+\tldr\tr3, [sp, #992]\t@ 0x3e0\n \tmovs\tr5, r1\n-\tldr\tr3, [sp, #856]\t@ 0x358\n+\tldr\tr3, [sp, #888]\t@ 0x378\n \tmovs\tr5, r1\n-\tldr\tr3, [sp, #752]\t@ 0x2f0\n+\tldr\tr3, [sp, #784]\t@ 0x310\n \tmovs\tr5, r1\n-\tldr\tr3, [sp, #552]\t@ 0x228\n+\tldr\tr3, [sp, #584]\t@ 0x248\n \tmovs\tr5, r1\n-\tldr\tr3, [sp, #592]\t@ 0x250\n+\tldr\tr3, [sp, #624]\t@ 0x270\n \tmovs\tr5, r1\n-\tldr\tr3, [sp, #488]\t@ 0x1e8\n+\tldr\tr3, [sp, #520]\t@ 0x208\n \tmovs\tr5, r1\n-\tadd\tr6, sp, #328\t@ 0x148\n+\tadd\tr6, sp, #360\t@ 0x168\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #992]\t@ 0x3e0\n+\tldr\tr2, [sp, #0]\n \tmovs\tr5, r1\n-\tldr\tr2, [sp, #96]\t@ 0x60\n+\tldr\tr2, [sp, #128]\t@ 0x80\n \tmovs\tr5, r1\n-\tldr\tr2, [sp, #72]\t@ 0x48\n+\tldr\tr2, [sp, #104]\t@ 0x68\n \tmovs\tr5, r1\n-\tldrh\tr6, [r0, #18]\n+\tldrh\tr6, [r1, #18]\n \tmovs\tr3, r1\n-\tldr\tr2, [sp, #328]\t@ 0x148\n+\tldr\tr2, [sp, #360]\t@ 0x168\n \tmovs\tr5, r1\n-\tldrh\tr0, [r3, #16]\n+\tldrh\tr0, [r4, #16]\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, unsigned int&, char const*, char const*, int, unsigned char) [clone .constprop.0]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1092]\t@ 340090 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a225c>\n \tmov\tr5, r2\n@@ -1685736,51 +1685736,51 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \tbcc.n\t3400ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2278>\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tb.n\t340354 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2520>\n+\tb.n\t340364 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2530>\n \tmovs\tr3, r1\n \tbcs.n\t340064 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2230>\n \tmovs\tr6, r2\n-\tldr\tr0, [sp, #240]\t@ 0xf0\n+\tldr\tr0, [sp, #272]\t@ 0x110\n \tmovs\tr5, r1\n-\tldr\tr0, [sp, #184]\t@ 0xb8\n+\tldr\tr0, [sp, #216]\t@ 0xd8\n \tmovs\tr5, r1\n \tbeq.n\t340074 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2240>\n \tmovs\tr6, r2\n-\tstr\tr7, [sp, #320]\t@ 0x140\n+\tstr\tr7, [sp, #352]\t@ 0x160\n \tmovs\tr5, r1\n-\tstr\tr7, [sp, #216]\t@ 0xd8\n+\tstr\tr7, [sp, #248]\t@ 0xf8\n \tmovs\tr5, r1\n-\tstr\tr7, [sp, #112]\t@ 0x70\n+\tstr\tr7, [sp, #144]\t@ 0x90\n \tmovs\tr5, r1\n-\tstr\tr6, [sp, #936]\t@ 0x3a8\n+\tstr\tr6, [sp, #968]\t@ 0x3c8\n \tmovs\tr5, r1\n-\tstr\tr6, [sp, #976]\t@ 0x3d0\n+\tstr\tr6, [sp, #1008]\t@ 0x3f0\n \tmovs\tr5, r1\n-\tstr\tr6, [sp, #872]\t@ 0x368\n+\tstr\tr6, [sp, #904]\t@ 0x388\n \tmovs\tr5, r1\n-\tudf\t#214\t@ 0xd6\n+\tudf\t#222\t@ 0xde\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #352]\t@ 0x160\n+\tstr\tr5, [sp, #384]\t@ 0x180\n \tmovs\tr5, r1\n-\tstr\tr5, [sp, #480]\t@ 0x1e0\n+\tstr\tr5, [sp, #512]\t@ 0x200\n \tmovs\tr5, r1\n-\tstr\tr5, [sp, #456]\t@ 0x1c8\n+\tstr\tr5, [sp, #488]\t@ 0x1e8\n \tmovs\tr5, r1\n-\tstrh\tr6, [r4, #44]\t@ 0x2c\n+\tstrh\tr6, [r5, #44]\t@ 0x2c\n \tmovs\tr3, r1\n-\tstr\tr5, [sp, #712]\t@ 0x2c8\n+\tstr\tr5, [sp, #744]\t@ 0x2e8\n \tmovs\tr5, r1\n-\tstrh\tr0, [r7, #42]\t@ 0x2a\n+\tstrh\tr0, [r0, #44]\t@ 0x2c\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, double&, char const*, char const*, int, unsigned char) [clone .constprop.0]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1100]\t@ 340538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2704>\n \tmov\tr5, r2\n@@ -1686314,51 +1686314,51 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \tldmia\tr6, {r2, r3, r5, r6}\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tbgt.n\t3404bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2688>\n+\tbgt.n\t3404cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2698>\n \tmovs\tr3, r1\n \tldmia\tr6, {r1, r6}\n \tmovs\tr6, r2\n-\tstr\tr3, [sp, #624]\t@ 0x270\n+\tstr\tr3, [sp, #656]\t@ 0x290\n \tmovs\tr5, r1\n-\tstr\tr3, [sp, #568]\t@ 0x238\n+\tstr\tr3, [sp, #600]\t@ 0x258\n \tmovs\tr5, r1\n \tldmia\tr4!, {r6}\n \tmovs\tr6, r2\n-\tstr\tr2, [sp, #688]\t@ 0x2b0\n+\tstr\tr2, [sp, #720]\t@ 0x2d0\n \tmovs\tr5, r1\n-\tstr\tr2, [sp, #584]\t@ 0x248\n+\tstr\tr2, [sp, #616]\t@ 0x268\n \tmovs\tr5, r1\n-\tstr\tr2, [sp, #480]\t@ 0x1e0\n+\tstr\tr2, [sp, #512]\t@ 0x200\n \tmovs\tr5, r1\n-\tstr\tr2, [sp, #280]\t@ 0x118\n+\tstr\tr2, [sp, #312]\t@ 0x138\n \tmovs\tr5, r1\n-\tstr\tr2, [sp, #320]\t@ 0x140\n+\tstr\tr2, [sp, #352]\t@ 0x160\n \tmovs\tr5, r1\n-\tstr\tr2, [sp, #216]\t@ 0xd8\n+\tstr\tr2, [sp, #248]\t@ 0xf8\n \tmovs\tr5, r1\n-\tbge.n\t3405d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a27a0>\n+\tbge.n\t3405e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a27b0>\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstr\tr0, [sp, #704]\t@ 0x2c0\n+\tstr\tr0, [sp, #736]\t@ 0x2e0\n \tmovs\tr5, r1\n-\tstr\tr0, [sp, #832]\t@ 0x340\n+\tstr\tr0, [sp, #864]\t@ 0x360\n \tmovs\tr5, r1\n-\tstr\tr0, [sp, #808]\t@ 0x328\n+\tstr\tr0, [sp, #840]\t@ 0x348\n \tmovs\tr5, r1\n-\tstrh\tr6, [r7, #6]\n+\tstrh\tr6, [r0, #8]\n \tmovs\tr3, r1\n-\tstr\tr1, [sp, #40]\t@ 0x28\n+\tstr\tr1, [sp, #72]\t@ 0x48\n \tmovs\tr5, r1\n-\tstrh\tr0, [r2, #6]\n+\tstrh\tr0, [r3, #6]\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, unsigned long long&, char const*, char const*, int, unsigned char) [clone .constprop.0]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1100]\t@ 3409e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2bac>\n \tmov\tr5, r2\n@@ -1686897,51 +1686897,51 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \tldmia\tr1!, {r2, r6, r7}\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #960\t@ (adr r2, 340dac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2f78>)\n+\tadd\tr2, pc, #992\t@ (adr r2, 340dcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2f98>)\n \tmovs\tr5, r1\n \tldmia\tr1, {r1, r3, r4, r7}\n \tmovs\tr6, r2\n-\tldrh\tr4, [r6, #54]\t@ 0x36\n+\tldrh\tr4, [r7, #54]\t@ 0x36\n \tmovs\tr5, r1\n-\tldrh\tr6, [r4, #54]\t@ 0x36\n+\tldrh\tr6, [r5, #54]\t@ 0x36\n \tmovs\tr5, r1\n \tstmia\tr7!, {r3, r4, r7}\n \tmovs\tr6, r2\n-\tldrh\tr4, [r0, #48]\t@ 0x30\n+\tldrh\tr4, [r1, #48]\t@ 0x30\n \tmovs\tr5, r1\n-\tldrh\tr2, [r5, #46]\t@ 0x2e\n+\tldrh\tr2, [r6, #46]\t@ 0x2e\n \tmovs\tr5, r1\n-\tldrh\tr0, [r2, #46]\t@ 0x2e\n+\tldrh\tr0, [r3, #46]\t@ 0x2e\n \tmovs\tr5, r1\n-\tldrh\tr6, [r3, #44]\t@ 0x2c\n+\tldrh\tr6, [r4, #44]\t@ 0x2c\n \tmovs\tr5, r1\n-\tldrh\tr0, [r5, #44]\t@ 0x2c\n+\tldrh\tr0, [r6, #44]\t@ 0x2c\n \tmovs\tr5, r1\n-\tldrh\tr6, [r1, #44]\t@ 0x2c\n+\tldrh\tr6, [r2, #44]\t@ 0x2c\n \tmovs\tr5, r1\n-\tadd\tr0, pc, #408\t@ (adr r0, 340bb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2d7c>)\n+\tadd\tr0, pc, #440\t@ (adr r0, 340bd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a2d9c>)\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrh\tr0, [r1, #32]\n+\tldrh\tr0, [r2, #32]\n \tmovs\tr5, r1\n-\tldrh\tr0, [r5, #32]\n+\tldrh\tr0, [r6, #32]\n \tmovs\tr5, r1\n-\tldrh\tr2, [r4, #32]\n+\tldrh\tr2, [r5, #32]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r2, #17]\n+\tldrb\tr6, [r3, #17]\n \tmovs\tr3, r1\n-\tldrh\tr2, [r4, #34]\t@ 0x22\n+\tldrh\tr2, [r5, #34]\t@ 0x22\n \tmovs\tr5, r1\n-\tldrb\tr0, [r5, #16]\n+\tldrb\tr0, [r6, #16]\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, unsigned int&, char const*, char const*, int, unsigned char) [clone .constprop.2]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1328]\t@ 340f6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a3138>\n \tmov\tr5, r2\n@@ -1687567,45 +1687567,45 @@\n \tblx\tbd88 \n \tstmia\tr5!, {r3, r4}\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr4!, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr6, r2\n-\tldrh\tr6, [r5, #16]\n+\tldrh\tr6, [r6, #16]\n \tmovs\tr5, r1\n-\tldrh\tr2, [r3, #16]\n+\tldrh\tr2, [r4, #16]\n \tmovs\tr5, r1\n \tstmia\tr2!, {r1, r2, r3, r6, r7}\n \tmovs\tr6, r2\n-\tldrh\tr2, [r7, #8]\n+\tldrh\tr2, [r0, #10]\n \tmovs\tr5, r1\n-\tldrh\tr0, [r4, #8]\n+\tldrh\tr0, [r5, #8]\n \tmovs\tr5, r1\n-\tldrh\tr6, [r0, #8]\n+\tldrh\tr6, [r1, #8]\n \tmovs\tr5, r1\n-\tldrh\tr4, [r2, #6]\n+\tldrh\tr4, [r3, #6]\n \tmovs\tr5, r1\n-\tldrh\tr6, [r3, #6]\n+\tldrh\tr6, [r4, #6]\n \tmovs\tr5, r1\n-\tldrh\tr4, [r0, #6]\n+\tldrh\tr4, [r1, #6]\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrh\tr2, [r7, #50]\t@ 0x32\n+\tstrh\tr2, [r0, #52]\t@ 0x34\n \tmovs\tr5, r1\n-\tstrh\tr2, [r3, #52]\t@ 0x34\n+\tstrh\tr2, [r4, #52]\t@ 0x34\n \tmovs\tr5, r1\n-\tstrh\tr4, [r2, #52]\t@ 0x34\n+\tstrh\tr4, [r3, #52]\t@ 0x34\n \tmovs\tr5, r1\n-\tstrb\tr0, [r1, #27]\n+\tstrb\tr0, [r2, #27]\n \tmovs\tr3, r1\n-\tstrh\tr4, [r2, #54]\t@ 0x36\n+\tstrh\tr4, [r3, #54]\t@ 0x36\n \tmovs\tr5, r1\n-\tstrb\tr2, [r3, #26]\n+\tstrb\tr2, [r4, #26]\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, double&, char const*, char const*, int, unsigned char) [clone .constprop.1]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr1, [pc, #1328]\t@ 3414f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a36bc>\n \tmov\tr5, r2\n@@ -1688236,45 +1688236,45 @@\n \tblx\tbd88 \n \tite\tls\n \tmovls\tr6, r2\n \tlsrhi\tr0, r2, #23\n \tmovs\tr0, r0\n \titee\tvc\n \tmovvc\tr6, r2\n-\tstrhvs\tr2, [r5, #36]\t@ 0x24\n+\tstrhvs\tr2, [r6, #36]\t@ 0x24\n \tmovvs\tr5, r1\n-\tstrh\tr6, [r2, #36]\t@ 0x24\n+\tstrh\tr6, [r3, #36]\t@ 0x24\n \tmovs\tr5, r1\n \tpop\t{r3, r6, pc}\n \tmovs\tr6, r2\n-\tstrh\tr4, [r6, #28]\n+\tstrh\tr4, [r7, #28]\n \tmovs\tr5, r1\n-\tstrh\tr2, [r3, #28]\n+\tstrh\tr2, [r4, #28]\n \tmovs\tr5, r1\n-\tstrh\tr0, [r0, #28]\n+\tstrh\tr0, [r1, #28]\n \tmovs\tr5, r1\n-\tstrh\tr6, [r1, #26]\n+\tstrh\tr6, [r2, #26]\n \tmovs\tr5, r1\n-\tstrh\tr0, [r3, #26]\n+\tstrh\tr0, [r4, #26]\n \tmovs\tr5, r1\n-\tstrh\tr6, [r7, #24]\n+\tstrh\tr6, [r0, #26]\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrh\tr6, [r6, #6]\n+\tstrh\tr6, [r7, #6]\n \tmovs\tr5, r1\n-\tstrh\tr6, [r2, #8]\n+\tstrh\tr6, [r3, #8]\n \tmovs\tr5, r1\n-\tstrh\tr0, [r2, #8]\n+\tstrh\tr0, [r3, #8]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r0, #5]\n+\tstrb\tr4, [r1, #5]\n \tmovs\tr3, r1\n-\tstrh\tr0, [r2, #10]\n+\tstrh\tr0, [r3, #10]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r2, #4]\n+\tstrb\tr6, [r3, #4]\n \tmovs\tr3, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, unsigned char&, char const*, char const*, int, unsigned char) [clone .constprop.0]:\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr1, [pc, #1408]\t@ 341ac4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a3c90>\n \tmov\tr5, r2\n@@ -1688974,75 +1688974,75 @@\n ./src/mira/../../src/mira/parameters.H:217\n \tblx\tbd88 \n \tnop\n \trev\tr4, r2\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r2, r5, r6}\n+\tldmia\tr0!, {r2, r3, r5, r6}\n \tmovs\tr3, r1\n \tcbnz\tr6, 341b0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a3cd8>\n \tmovs\tr6, r2\n-\tadds\tr6, #208\t@ 0xd0\n+\tadds\tr6, #216\t@ 0xd8\n \tmovs\tr3, r1\n-\tldrb\tr2, [r3, #30]\n+\tldrb\tr2, [r4, #30]\n \tmovs\tr5, r1\n-\tldrb\tr0, [r6, #27]\n+\tldrb\tr0, [r7, #27]\n \tmovs\tr5, r1\n \t\t\t@ instruction: 0xb7cc\n \tmovs\tr6, r2\n-\tldrb\tr2, [r2, #25]\n+\tldrb\tr2, [r3, #25]\n \tmovs\tr5, r1\n-\tldrb\tr0, [r7, #24]\n+\tldrb\tr0, [r0, #25]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r3, #24]\n+\tldrb\tr6, [r4, #24]\n \tmovs\tr5, r1\n-\tldrb\tr4, [r0, #24]\n+\tldrb\tr4, [r1, #24]\n \tmovs\tr5, r1\n-\tldrb\tr2, [r2, #23]\n+\tldrb\tr2, [r3, #23]\n \tmovs\tr5, r1\n-\tldrb\tr4, [r3, #23]\n+\tldrb\tr4, [r4, #23]\n \tmovs\tr5, r1\n-\tldrb\tr2, [r0, #23]\n+\tldrb\tr2, [r1, #23]\n \tmovs\tr5, r1\n-\tldrb\tr0, [r4, #25]\n+\tldrb\tr0, [r5, #25]\n \tmovs\tr5, r1\n-\tstmia\tr5!, {r1, r3, r7}\n+\tstmia\tr5!, {r1, r4, r7}\n \tmovs\tr3, r1\n-\tldrb\tr4, [r6, #21]\n+\tldrb\tr4, [r7, #21]\n \tmovs\tr5, r1\n \tpush\t{r3, r4, r6, r7, lr}\n \tmovs\tr6, r2\n-\tldrb\tr6, [r6, #18]\n+\tldrb\tr6, [r7, #18]\n \tmovs\tr5, r1\n \tpush\t{r2, r5, r7, lr}\n \tmovs\tr6, r2\n-\tldrb\tr2, [r2, #18]\n+\tldrb\tr2, [r3, #18]\n \tmovs\tr5, r1\n \tpush\t{r2, r3, r4, r6, lr}\n \tmovs\tr6, r2\n-\tldrb\tr0, [r2, #17]\n+\tldrb\tr0, [r3, #17]\n \tmovs\tr5, r1\n \tpush\t{r6, lr}\n \tmovs\tr6, r2\n-\tldrb\tr6, [r4, #16]\n+\tldrb\tr6, [r5, #16]\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldrb\tr2, [r5, #12]\n+\tldrb\tr2, [r6, #12]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r0, #13]\n+\tldrb\tr6, [r1, #13]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r7, #12]\n+\tldrb\tr6, [r0, #13]\n \tmovs\tr5, r1\n-\tldr\tr2, [r6, #52]\t@ 0x34\n+\tldr\tr2, [r7, #52]\t@ 0x34\n \tmovs\tr3, r1\n-\tldrb\tr6, [r7, #13]\n+\tldrb\tr6, [r0, #14]\n \tmovs\tr5, r1\n-\tldr\tr4, [r0, #52]\t@ 0x34\n+\tldr\tr4, [r1, #52]\t@ 0x34\n \tmovs\tr3, r1\n MIRAParameters::~MIRAParameters():\n /usr/include/c++/10/bits/basic_string.h:203\n \taddw\tr3, r0, #2488\t@ 0x9b8\n ./src/mira/parameters.C:391\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -1689965,93 +1689965,93 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tuxth\tr0, r3\n \tmovs\tr6, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr0, [r4, #3]\n+\tldrb\tr0, [r5, #3]\n \tmovs\tr5, r1\n-\tsubs\tr3, #236\t@ 0xec\n+\tsubs\tr3, #244\t@ 0xf4\n \tmovs\tr3, r1\n-\tldrb\tr4, [r7, #2]\n+\tldrb\tr4, [r0, #3]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r7, #2]\n+\tldrb\tr6, [r0, #3]\n \tmovs\tr5, r1\n-\tldrb\tr0, [r5, #2]\n+\tldrb\tr0, [r6, #2]\n \tmovs\tr5, r1\n-\tsubs\tr3, #102\t@ 0x66\n+\tsubs\tr3, #110\t@ 0x6e\n \tmovs\tr3, r1\n-\tldrb\tr0, [r7, #0]\n+\tldrb\tr0, [r0, #1]\n \tmovs\tr5, r1\n-\tldrb\tr4, [r7, #0]\n+\tldrb\tr4, [r0, #1]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r3, #1]\n+\tldrb\tr6, [r4, #1]\n \tmovs\tr5, r1\n-\tsubs\tr3, #18\n+\tsubs\tr3, #26\n \tmovs\tr3, r1\n-\tstrb\tr4, [r4, #31]\n+\tstrb\tr4, [r5, #31]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r5, #31]\n+\tstrb\tr0, [r6, #31]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r4, #31]\n+\tstrb\tr4, [r5, #31]\n \tmovs\tr5, r1\n-\tsubs\tr2, #148\t@ 0x94\n+\tsubs\tr2, #156\t@ 0x9c\n \tmovs\tr3, r1\n-\tstrb\tr6, [r4, #29]\n+\tstrb\tr6, [r5, #29]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r5, #29]\n+\tstrb\tr2, [r6, #29]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r1, #30]\n+\tstrb\tr4, [r2, #30]\n \tmovs\tr5, r1\n-\tsubs\tr2, #26\n+\tsubs\tr2, #34\t@ 0x22\n \tmovs\tr3, r1\n-\tstrb\tr4, [r5, #27]\n+\tstrb\tr4, [r6, #27]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r6, #27]\n+\tstrb\tr0, [r7, #27]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r5, #28]\n+\tstrb\tr0, [r6, #28]\n \tmovs\tr5, r1\n-\tsubs\tr1, #202\t@ 0xca\n+\tsubs\tr1, #210\t@ 0xd2\n \tmovs\tr3, r1\n-\tstrb\tr6, [r0, #27]\n+\tstrb\tr6, [r1, #27]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r4, #26]\n+\tstrb\tr0, [r5, #26]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r3, #27]\n+\tstrb\tr6, [r4, #27]\n \tmovs\tr5, r1\n-\tsubs\tr1, #120\t@ 0x78\n+\tsubs\tr1, #128\t@ 0x80\n \tmovs\tr3, r1\n-\tstrb\tr2, [r6, #25]\n+\tstrb\tr2, [r7, #25]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r1, #25]\n+\tstrb\tr6, [r2, #25]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r2, #24]\n+\tstrb\tr6, [r3, #24]\n \tmovs\tr5, r1\n-\tsubs\tr1, #40\t@ 0x28\n+\tsubs\tr1, #48\t@ 0x30\n \tmovs\tr3, r1\n-\tstrb\tr2, [r4, #24]\n+\tstrb\tr2, [r5, #24]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r7, #23]\n+\tstrb\tr4, [r0, #24]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r1, #24]\n+\tstrb\tr0, [r2, #24]\n \tmovs\tr5, r1\n-\tsubs\tr0, #208\t@ 0xd0\n+\tsubs\tr0, #216\t@ 0xd8\n \tmovs\tr3, r1\n-\tstrb\tr2, [r4, #22]\n+\tstrb\tr2, [r5, #22]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r4, #22]\n+\tstrb\tr6, [r5, #22]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r3, #23]\n+\tstrb\tr0, [r4, #23]\n \tmovs\tr5, r1\n-\tsubs\tr0, #90\t@ 0x5a\n+\tsubs\tr0, #98\t@ 0x62\n \tmovs\tr3, r1\n-\tstrb\tr4, [r5, #20]\n+\tstrb\tr4, [r6, #20]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r6, #20]\n+\tstrb\tr0, [r7, #20]\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n MIRAParameters::generateProjectInNames(std::vector >&, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/parameters.C:2116\n \tldr\tr2, [r1, #4]\n ./src/mira/parameters.C:2115\n@@ -1690322,23 +1690322,23 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tadd\tr4, sp, #120\t@ 0x78\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrb\tr6, [r0, #14]\n+\tstrb\tr6, [r1, #14]\n \tmovs\tr5, r1\n \tlsrs\tr6, r4, #13\n \tmovs\tr1, r3\n-\tstrb\tr2, [r0, #14]\n+\tstrb\tr2, [r1, #14]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r7, #13]\n+\tstrb\tr0, [r0, #14]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r7, #13]\n+\tstrb\tr6, [r0, #14]\n \tmovs\tr5, r1\n \tlsrs\tr2, r2, #12\n \tmovs\tr1, r3\n \tadd\tr3, sp, #256\t@ 0x100\n \tmovs\tr6, r2\n \tsubs\tr1, #132\t@ 0x84\n \tmovs\tr2, r1\n@@ -1690548,23 +1690548,23 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tadd\tr2, sp, #616\t@ 0x268\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrb\tr6, [r7, #7]\n+\tstrb\tr6, [r0, #8]\n \tmovs\tr5, r1\n \tlsrs\tr6, r3, #7\n \tmovs\tr1, r3\n-\tstrb\tr2, [r7, #7]\n+\tstrb\tr2, [r0, #8]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r3, #8]\n+\tstrb\tr2, [r4, #8]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r6, #7]\n+\tstrb\tr4, [r7, #7]\n \tmovs\tr5, r1\n \tlsrs\tr0, r1, #6\n \tmovs\tr1, r3\n \tadd\tr1, sp, #720\t@ 0x2d0\n \tmovs\tr6, r2\n \tadds\tr7, #250\t@ 0xfa\n \tmovs\tr2, r1\n@@ -1690772,23 +1690772,23 @@\n \tnop\n \tadd\tr1, sp, #56\t@ 0x38\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr0, sp, #688\t@ 0x2b0\n \tmovs\tr6, r2\n-\tstrb\tr2, [r4, #0]\n+\tstrb\tr2, [r5, #0]\n \tmovs\tr5, r1\n \tlsrs\tr2, r0, #32\n \tmovs\tr1, r3\n-\tstrb\tr6, [r3, #0]\n+\tstrb\tr6, [r4, #0]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r7, #1]\n+\tstrb\tr0, [r0, #2]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r6, #1]\n+\tstrb\tr4, [r7, #1]\n \tmovs\tr5, r1\n \tlsls\tr0, r6, #30\n \tmovs\tr1, r3\n \tadds\tr6, #130\t@ 0x82\n \tmovs\tr2, r1\n MIRAParameters::checkCOMMON(std::__cxx11::basic_string, std::allocator > const&, FlexLexer*, std::__cxx11::basic_stringstream, std::allocator >&):\n ./src/mira/parameters.C:2465\n@@ -1690884,29 +1690884,29 @@\n \tadd\tr0, r4\n /usr/include/c++/10/bits/ios_base.h:170\n \tldr\tr1, [r0, #20]\n /usr/include/c++/10/bits/basic_ios.h:158\n \torr.w\tr1, r1, #1\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t34281e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a49ea>\n-\tstrb\tr6, [r3, #1]\n+\tstrb\tr6, [r4, #1]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r4, #1]\n+\tstrb\tr0, [r5, #1]\n \tmovs\tr5, r1\n-\tldr\tr6, [r6, #112]\t@ 0x70\n+\tldr\tr6, [r7, #112]\t@ 0x70\n \tmovs\tr5, r1\n \tlsls\tr0, r3, #28\n \tmovs\tr1, r3\n-\tstrb\tr0, [r1, #1]\n+\tstrb\tr0, [r2, #1]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r7, #0]\n+\tstrb\tr0, [r0, #1]\n \tmovs\tr5, r1\n \tlsls\tr2, r2, #27\n \tmovs\tr1, r3\n-\tstrb\tr4, [r7, #1]\n+\tstrb\tr4, [r0, #2]\n \tmovs\tr5, r1\n MIRAParameters::checkNONCOMMON(std::__cxx11::basic_string, std::allocator > const&, FlexLexer*, std::__cxx11::basic_stringstream, std::allocator >&):\n ./src/mira/parameters.C:2475\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r1\n /usr/include/c++/10/bits/basic_string.h:6187\n \tldr\tr1, [pc, #144]\t@ (342914 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a4ae0>)\n@@ -1690995,29 +1690995,29 @@\n \tadd\tr0, r4\n /usr/include/c++/10/bits/ios_base.h:170\n \tldr\tr1, [r0, #20]\n /usr/include/c++/10/bits/basic_ios.h:158\n \torr.w\tr1, r1, #1\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.n\t3428d6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a4aa2>\n-\tldr\tr2, [r4, #120]\t@ 0x78\n+\tldr\tr2, [r5, #120]\t@ 0x78\n \tmovs\tr5, r1\n-\tldr\tr6, [r4, #120]\t@ 0x78\n+\tldr\tr6, [r5, #120]\t@ 0x78\n \tmovs\tr5, r1\n-\tldr\tr6, [r7, #100]\t@ 0x64\n+\tldr\tr6, [r0, #104]\t@ 0x68\n \tmovs\tr5, r1\n \tlsls\tr0, r4, #25\n \tmovs\tr1, r3\n-\tldr\tr0, [r2, #120]\t@ 0x78\n+\tldr\tr0, [r3, #120]\t@ 0x78\n \tmovs\tr5, r1\n-\tldr\tr4, [r4, #124]\t@ 0x7c\n+\tldr\tr4, [r5, #124]\t@ 0x7c\n \tmovs\tr5, r1\n \tlsls\tr2, r3, #24\n \tmovs\tr1, r3\n-\tmovs\tr1, #152\t@ 0x98\n+\tmovs\tr1, #160\t@ 0xa0\n \tmovs\tr3, r1\n MIRAParameters::addModifiersForMapping(std::__cxx11::basic_string, std::allocator >&, std::vector >, std::allocator > > >&, std::vector >&, bool):\n ./src/mira/parameters.C:5354\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr7, r3\n /usr/include/c++/10/bits/basic_string.h:322\n \tldr\tr3, [r0, #4]\n@@ -1691318,57 +1691318,57 @@\n \tadd\tr1, pc\n \tblx\tb788 , std::allocator >::append(char const*)@plt+0x4>\n \tb.n\t342b76 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a4d42>\n /usr/include/c++/10/bits/basic_string.h:323\n \tldr\tr0, [pc, #88]\t@ (342c08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a4dd4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr4, [r4, #124]\t@ 0x7c\n+\tldr\tr4, [r5, #124]\t@ 0x7c\n \tmovs\tr5, r1\n-\tstrb\tr0, [r5, #12]\n+\tstrb\tr0, [r6, #12]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r5, #24]\n+\tstrb\tr4, [r6, #24]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r3, #3]\n+\tstrb\tr2, [r4, #3]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r6, #2]\n+\tstrb\tr2, [r7, #2]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r3, #1]\n+\tstrb\tr4, [r4, #1]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r4, #0]\n+\tstrb\tr6, [r5, #0]\n \tmovs\tr5, r1\n-\tldr\tr0, [r5, #124]\t@ 0x7c\n+\tldr\tr0, [r6, #124]\t@ 0x7c\n \tmovs\tr5, r1\n-\tstrb\tr6, [r5, #10]\n+\tstrb\tr6, [r6, #10]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r0, #17]\n+\tstrb\tr4, [r1, #17]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r4, #17]\n+\tstrb\tr2, [r5, #17]\n \tmovs\tr5, r1\n-\tldr\tr4, [r1, #116]\t@ 0x74\n+\tldr\tr4, [r2, #116]\t@ 0x74\n \tmovs\tr5, r1\n-\tstrb\tr6, [r5, #20]\n+\tstrb\tr6, [r6, #20]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r0, #20]\n+\tstrb\tr4, [r1, #20]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r0, #20]\n+\tstrb\tr6, [r1, #20]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r7, #18]\n+\tstrb\tr2, [r0, #19]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r0, #18]\n+\tstrb\tr6, [r1, #18]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r1, #10]\n+\tstrb\tr2, [r2, #10]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r7, #16]\n+\tstrb\tr0, [r0, #17]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r6, #5]\n+\tstrb\tr2, [r7, #5]\n \tmovs\tr5, r1\n-\tstrb\tr0, [r7, #8]\n+\tstrb\tr0, [r0, #9]\n \tmovs\tr5, r1\n-\tldrsh\tr6, [r2, r5]\n+\tldrsh\tr2, [r4, r5]\n \tmovs\tr2, r1\n MIRAParameters::restoreParsedSettingsValues(std::vector >&, std::vector >&):\n ./src/mira/parameters.C:5540\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr7, #12275\t@ 0x2ff3\n \tmovt\tr7, #62207\t@ 0xf2ff\n@@ -1692287,139 +1692287,139 @@\n \tb.n\t343326 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a54f2>\n \tb.n\t343326 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a54f2>\n \tnop\n \tadd\tr1, pc, #992\t@ (adr r1, 343734 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a5900>)\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrb\tr2, [r0, #11]\n+\tstrb\tr2, [r1, #11]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r1, #11]\n+\tstrb\tr4, [r2, #11]\n \tmovs\tr5, r1\n-\tstrh\tr2, [r0, #30]\n+\tstrh\tr6, [r1, #30]\n \tmovs\tr2, r1\n-\tstrh\tr6, [r2, #28]\n+\tstrh\tr2, [r4, #28]\n \tmovs\tr2, r1\n-\tldr\tr2, [r3, r0]\n+\tldr\tr2, [r4, r0]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r7, #9]\n+\tstrb\tr2, [r0, #10]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r1, #15]\n+\tstrb\tr4, [r2, #15]\n \tmovs\tr5, r1\n-\tstrb\tr2, [r4, #14]\n+\tstrb\tr2, [r5, #14]\n \tmovs\tr5, r1\n-\tldrsb\tr6, [r5, r6]\n+\tldrsb\tr6, [r6, r6]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r4, #8]\n+\tstrb\tr2, [r5, #8]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r3, #11]\n+\tstrb\tr0, [r5, #11]\n \tmovs\tr2, r1\n-\tstrb\tr2, [r6, #10]\n+\tstrb\tr6, [r7, #10]\n \tmovs\tr2, r1\n-\tldrsb\tr2, [r0, r5]\n+\tldrsb\tr2, [r1, r5]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r1, #7]\n+\tstrb\tr2, [r2, #7]\n \tmovs\tr5, r1\n-\tadd\tr0, sp, #640\t@ 0x280\n+\tadd\tr0, sp, #688\t@ 0x2b0\n \tmovs\tr2, r1\n-\tadd\tr0, sp, #472\t@ 0x1d8\n+\tadd\tr0, sp, #520\t@ 0x208\n \tmovs\tr2, r1\n-\tldrsb\tr6, [r2, r3]\n+\tldrsb\tr6, [r3, r3]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r6, #5]\n+\tstrb\tr2, [r7, #5]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r0, #8]\n+\tstrb\tr0, [r2, #8]\n \tmovs\tr2, r1\n-\tstrb\tr2, [r3, #7]\n+\tstrb\tr6, [r4, #7]\n \tmovs\tr2, r1\n-\tldrsb\tr2, [r5, r1]\n+\tldrsb\tr2, [r6, r1]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r3, #4]\n+\tstrb\tr2, [r4, #4]\n \tmovs\tr5, r1\n-\tadd\tr7, pc, #808\t@ (adr r7, 3436dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a58a8>)\n+\tadd\tr7, pc, #856\t@ (adr r7, 34370c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a58d8>)\n \tmovs\tr2, r1\n-\tadd\tr7, pc, #648\t@ (adr r7, 343640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a580c>)\n+\tadd\tr7, pc, #696\t@ (adr r7, 343670 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a583c>)\n \tmovs\tr2, r1\n-\tldrsb\tr4, [r0, r0]\n+\tldrsb\tr4, [r1, r0]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r1, #3]\n+\tstrb\tr2, [r2, #3]\n \tmovs\tr5, r1\n-\tldmia\tr7!, {r1, r4}\n+\tldmia\tr7!, {r1, r3, r4}\n \tmovs\tr3, r1\n-\tldmia\tr6, {r1, r3, r5, r6, r7}\n+\tldmia\tr6, {r1, r4, r5, r6, r7}\n \tmovs\tr3, r1\n-\tstrb\tr0, [r4, r6]\n+\tstrb\tr0, [r5, r6]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r7, #1]\n+\tstrb\tr2, [r0, #2]\n \tmovs\tr5, r1\n-\tadd\tr0, sp, #168\t@ 0xa8\n+\tadd\tr0, sp, #216\t@ 0xd8\n \tmovs\tr2, r1\n-\tadd\tr0, sp, #8\n+\tadd\tr0, sp, #56\t@ 0x38\n \tmovs\tr2, r1\n-\tstrb\tr4, [r7, r4]\n+\tstrb\tr4, [r0, r5]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r5, #0]\n+\tstrb\tr2, [r6, #0]\n \tmovs\tr5, r1\n-\tadd\tr7, pc, #488\t@ (adr r7, 3435cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a5798>)\n+\tadd\tr7, pc, #536\t@ (adr r7, 3435fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a57c8>)\n \tmovs\tr2, r1\n-\tadd\tr7, pc, #328\t@ (adr r7, 343530 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a56fc>)\n+\tadd\tr7, pc, #376\t@ (adr r7, 343560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a572c>)\n \tmovs\tr2, r1\n-\tstrb\tr0, [r3, r3]\n+\tstrb\tr0, [r4, r3]\n \tmovs\tr3, r1\n-\tldr\tr2, [r3, #124]\t@ 0x7c\n+\tldr\tr2, [r4, #124]\t@ 0x7c\n \tmovs\tr5, r1\n-\tstrb\tr6, [r0, #1]\n+\tstrb\tr6, [r1, #1]\n \tmovs\tr5, r1\n-\tstrb\tr6, [r3, #0]\n+\tstrb\tr6, [r4, #0]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r6, r1]\n+\tstrb\tr4, [r7, r1]\n \tmovs\tr3, r1\n-\tldr\tr2, [r1, #120]\t@ 0x78\n+\tldr\tr2, [r2, #120]\t@ 0x78\n \tmovs\tr5, r1\n-\tadd\tr7, pc, #24\t@ (adr r7, 34341c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a55e8>)\n+\tadd\tr7, pc, #72\t@ (adr r7, 34344c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a5618>)\n \tmovs\tr2, r1\n-\tadd\tr6, pc, #896\t@ (adr r6, 343788 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a5954>)\n+\tadd\tr6, pc, #944\t@ (adr r6, 3437b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a5984>)\n \tmovs\tr2, r1\n-\tstrb\tr2, [r2, r0]\n+\tstrb\tr2, [r3, r0]\n \tmovs\tr3, r1\n-\tldr\tr4, [r7, #112]\t@ 0x70\n+\tldr\tr4, [r0, #116]\t@ 0x74\n \tmovs\tr5, r1\n-\tadd\tr6, pc, #768\t@ (adr r6, 343714 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a58e0>)\n+\tadd\tr6, pc, #816\t@ (adr r6, 343744 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a5910>)\n \tmovs\tr2, r1\n-\tadd\tr6, pc, #616\t@ (adr r6, 343680 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a584c>)\n+\tadd\tr6, pc, #664\t@ (adr r6, 3436b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a587c>)\n \tmovs\tr2, r1\n-\tstrh\tr0, [r6, r6]\n+\tstrh\tr0, [r7, r6]\n \tmovs\tr3, r1\n \tldr\tr4, [sp, #1008]\t@ 0x3f0\n \tmovs\tr6, r2\n-\tldr\tr2, [r6, #92]\t@ 0x5c\n+\tldr\tr2, [r7, #92]\t@ 0x5c\n \tmovs\tr5, r1\n \tldr\tr4, [sp, #856]\t@ 0x358\n \tmovs\tr6, r2\n-\tldr\tr2, [r2, #92]\t@ 0x5c\n+\tldr\tr2, [r3, #92]\t@ 0x5c\n \tmovs\tr5, r1\n-\tldr\tr2, [r0, #92]\t@ 0x5c\n+\tldr\tr2, [r1, #92]\t@ 0x5c\n \tmovs\tr5, r1\n-\tldr\tr6, [r6, #88]\t@ 0x58\n+\tldr\tr6, [r7, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tldr\tr2, [r5, #88]\t@ 0x58\n+\tldr\tr2, [r6, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tldr\tr6, [r3, #88]\t@ 0x58\n+\tldr\tr6, [r4, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tldr\tr2, [r2, #88]\t@ 0x58\n+\tldr\tr2, [r3, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tldr\tr6, [r0, #88]\t@ 0x58\n+\tldr\tr6, [r1, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tldr\tr2, [r7, #84]\t@ 0x54\n+\tldr\tr2, [r0, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tldr\tr6, [r5, #84]\t@ 0x54\n+\tldr\tr6, [r6, #84]\t@ 0x54\n \tmovs\tr5, r1\n-\tldr\tr2, [r4, #84]\t@ 0x54\n+\tldr\tr2, [r5, #84]\t@ 0x54\n \tmovs\tr5, r1\n-\tldr\tr6, [r2, #84]\t@ 0x54\n+\tldr\tr6, [r3, #84]\t@ 0x54\n \tmovs\tr5, r1\n MIRAParameters::initStdLocations():\n ./src/mira/parameters.C:5559\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr3, #0\n ./src/mira/parameters.C:5559\n@@ -1692920,33 +1692920,33 @@\n \tb.n\t343710 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a58dc>\n \tldr\tr3, [sp, #0]\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xfa8a0018\n \t\t\t@ instruction: 0xfa5a0018\n-\tldr\tr0, [r6, #68]\t@ 0x44\n+\tldr\tr0, [r7, #68]\t@ 0x44\n \tmovs\tr5, r1\n \t\t\t@ instruction: 0xfa1c0018\n \tldr??.w\tr0, [r0, #24]\n-\tldr\tr2, [r3, #64]\t@ 0x40\n+\tldr\tr2, [r4, #64]\t@ 0x40\n \tmovs\tr5, r1\n \tldrsh.w\tr0, [lr, #24]\n \tvld4.8\t{d16-d19}, [sl :64], r8\n-\tldr\tr6, [r3, #56]\t@ 0x38\n+\tldr\tr6, [r4, #56]\t@ 0x38\n \tmovs\tr5, r1\n \tldrsh.w\tr0, [sl, r8, lsl #1]\n \tldr\tr1, [sp, #120]\t@ 0x78\n \tmovs\tr6, r2\n \tldrb.w\tr0, [r4, #24]\n \tldr??.w\tr0, [r6, r8, lsl #1]\n \tldr.w\tr0, [r8, r8, lsl #1]\n-\tstrb\tr2, [r0, r0]\n+\tstrb\tr6, [r1, r0]\n \tmovs\tr2, r1\n-\tstrh\tr2, [r7, r7]\n+\tstrb\tr6, [r0, r0]\n \tmovs\tr2, r1\n MIRAParameters::getBinPath[abi:cxx11]():\n ./src/mira/parameters.C:5577\n \tpush\t{r3, lr}\n /usr/include/c++/10/bits/basic_string.h:902\n \tldr\tr3, [pc, #20]\t@ (3437c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a598c>)\n \tadd\tr3, pc\n@@ -1694679,153 +1694679,153 @@\n \tb.n\t34448c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a6658>\n \tb.n\t34445a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a6626>\n \tnop\n \tstr\tr7, [sp, #64]\t@ 0x40\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [r4, #12]\n+\tldr\tr2, [r5, #12]\n \tmovs\tr5, r1\n-\tldr\tr6, [r6, #8]\n+\tldr\tr6, [r7, #8]\n \tmovs\tr5, r1\n-\tldr\tr4, [r3, #8]\n+\tldr\tr4, [r4, #8]\n \tmovs\tr5, r1\n-\tldr\tr2, [r6, #4]\n+\tldr\tr2, [r7, #4]\n \tmovs\tr5, r1\n-\tldr\tr4, [r2, #4]\n+\tldr\tr4, [r3, #4]\n \tmovs\tr5, r1\n-\tldr\tr2, [r5, #0]\n+\tldr\tr2, [r6, #0]\n \tmovs\tr5, r1\n-\tldr\tr0, [r0, #0]\n+\tldr\tr0, [r1, #0]\n \tmovs\tr5, r1\n-\tstr\tr6, [r2, #124]\t@ 0x7c\n+\tstr\tr6, [r3, #124]\t@ 0x7c\n \tmovs\tr5, r1\n-\tstr\tr4, [r5, #120]\t@ 0x78\n+\tstr\tr4, [r6, #120]\t@ 0x78\n \tmovs\tr5, r1\n-\tstr\tr2, [r0, #120]\t@ 0x78\n+\tstr\tr2, [r1, #120]\t@ 0x78\n \tmovs\tr5, r1\n-\tstr\tr0, [r3, #116]\t@ 0x74\n+\tstr\tr0, [r4, #116]\t@ 0x74\n \tmovs\tr5, r1\n-\tstr\tr6, [r5, #112]\t@ 0x70\n+\tstr\tr6, [r6, #112]\t@ 0x70\n \tmovs\tr5, r1\n-\tstr\tr4, [r0, #112]\t@ 0x70\n+\tstr\tr4, [r1, #112]\t@ 0x70\n \tmovs\tr5, r1\n-\tstr\tr6, [r4, #108]\t@ 0x6c\n+\tstr\tr6, [r5, #108]\t@ 0x6c\n \tmovs\tr5, r1\n-\tstr\tr2, [r4, #108]\t@ 0x6c\n+\tstr\tr2, [r5, #108]\t@ 0x6c\n \tmovs\tr5, r1\n-\tstr\tr6, [r4, #108]\t@ 0x6c\n+\tstr\tr6, [r5, #108]\t@ 0x6c\n \tmovs\tr5, r1\n-\tstr\tr4, [r4, #108]\t@ 0x6c\n+\tstr\tr4, [r5, #108]\t@ 0x6c\n \tmovs\tr5, r1\n-\tstr\tr4, [r3, #108]\t@ 0x6c\n+\tstr\tr4, [r4, #108]\t@ 0x6c\n \tmovs\tr5, r1\n-\tstr\tr0, [r3, #108]\t@ 0x6c\n+\tstr\tr0, [r4, #108]\t@ 0x6c\n \tmovs\tr5, r1\n-\tstr\tr2, [r0, #108]\t@ 0x6c\n+\tstr\tr2, [r1, #108]\t@ 0x6c\n \tmovs\tr5, r1\n-\tstr\tr0, [r6, #104]\t@ 0x68\n+\tstr\tr0, [r7, #104]\t@ 0x68\n \tmovs\tr5, r1\n-\tstr\tr2, [r3, #104]\t@ 0x68\n+\tstr\tr2, [r4, #104]\t@ 0x68\n \tmovs\tr5, r1\n-\tstr\tr0, [r0, #104]\t@ 0x68\n+\tstr\tr0, [r1, #104]\t@ 0x68\n \tmovs\tr5, r1\n-\tstr\tr6, [r4, #100]\t@ 0x64\n+\tstr\tr6, [r5, #100]\t@ 0x64\n \tmovs\tr5, r1\n-\tstr\tr0, [r2, #100]\t@ 0x64\n+\tstr\tr0, [r3, #100]\t@ 0x64\n \tmovs\tr5, r1\n-\tstr\tr6, [r7, #96]\t@ 0x60\n+\tstr\tr6, [r0, #100]\t@ 0x64\n \tmovs\tr5, r1\n-\tstr\tr0, [r5, #96]\t@ 0x60\n+\tstr\tr0, [r6, #96]\t@ 0x60\n \tmovs\tr5, r1\n-\tstr\tr6, [r2, #96]\t@ 0x60\n+\tstr\tr6, [r3, #96]\t@ 0x60\n \tmovs\tr5, r1\n-\tstr\tr4, [r7, #92]\t@ 0x5c\n+\tstr\tr4, [r0, #96]\t@ 0x60\n \tmovs\tr5, r1\n-\tstr\tr2, [r5, #92]\t@ 0x5c\n+\tstr\tr2, [r6, #92]\t@ 0x5c\n \tmovs\tr5, r1\n-\tstr\tr0, [r3, #92]\t@ 0x5c\n+\tstr\tr0, [r4, #92]\t@ 0x5c\n \tmovs\tr5, r1\n-\tstr\tr6, [r0, #92]\t@ 0x5c\n+\tstr\tr6, [r1, #92]\t@ 0x5c\n \tmovs\tr5, r1\n-\tstr\tr4, [r6, #88]\t@ 0x58\n+\tstr\tr4, [r7, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tstr\tr2, [r4, #88]\t@ 0x58\n+\tstr\tr2, [r5, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tstr\tr4, [r1, #88]\t@ 0x58\n+\tstr\tr4, [r2, #88]\t@ 0x58\n \tmovs\tr5, r1\n-\tstr\tr6, [r6, #84]\t@ 0x54\n+\tstr\tr6, [r7, #84]\t@ 0x54\n \tmovs\tr5, r1\n-\tstr\tr0, [r4, #84]\t@ 0x54\n+\tstr\tr0, [r5, #84]\t@ 0x54\n \tmovs\tr5, r1\n-\tstr\tr6, [r1, #84]\t@ 0x54\n+\tstr\tr6, [r2, #84]\t@ 0x54\n \tmovs\tr5, r1\n-\tstr\tr0, [r7, #80]\t@ 0x50\n+\tstr\tr0, [r0, #84]\t@ 0x54\n \tmovs\tr5, r1\n-\tstr\tr6, [r3, #80]\t@ 0x50\n+\tstr\tr6, [r4, #80]\t@ 0x50\n \tmovs\tr5, r1\n-\tstr\tr4, [r0, #80]\t@ 0x50\n+\tstr\tr4, [r1, #80]\t@ 0x50\n \tmovs\tr5, r1\n-\tstr\tr2, [r6, #76]\t@ 0x4c\n+\tstr\tr2, [r7, #76]\t@ 0x4c\n \tmovs\tr5, r1\n-\tstr\tr0, [r3, #76]\t@ 0x4c\n+\tstr\tr0, [r4, #76]\t@ 0x4c\n \tmovs\tr5, r1\n-\tstr\tr2, [r7, #72]\t@ 0x48\n+\tstr\tr2, [r0, #76]\t@ 0x4c\n \tmovs\tr5, r1\n-\tstr\tr4, [r4, #72]\t@ 0x48\n+\tstr\tr4, [r5, #72]\t@ 0x48\n \tmovs\tr5, r1\n-\tstr\tr2, [r1, #72]\t@ 0x48\n+\tstr\tr2, [r2, #72]\t@ 0x48\n \tmovs\tr5, r1\n-\tstr\tr0, [r0, #72]\t@ 0x48\n+\tstr\tr0, [r1, #72]\t@ 0x48\n \tmovs\tr5, r1\n-\tstr\tr6, [r5, #68]\t@ 0x44\n+\tstr\tr6, [r6, #68]\t@ 0x44\n \tmovs\tr5, r1\n-\tstr\tr0, [r3, #68]\t@ 0x44\n+\tstr\tr0, [r4, #68]\t@ 0x44\n \tmovs\tr5, r1\n-\tstr\tr2, [r0, #68]\t@ 0x44\n+\tstr\tr2, [r1, #68]\t@ 0x44\n \tmovs\tr5, r1\n-\tstr\tr0, [r6, #64]\t@ 0x40\n+\tstr\tr0, [r7, #64]\t@ 0x40\n \tmovs\tr5, r1\n-\tstr\tr2, [r3, #64]\t@ 0x40\n+\tstr\tr2, [r4, #64]\t@ 0x40\n \tmovs\tr5, r1\n-\tstr\tr0, [r1, #64]\t@ 0x40\n+\tstr\tr0, [r2, #64]\t@ 0x40\n \tmovs\tr5, r1\n-\tstr\tr2, [r6, #60]\t@ 0x3c\n+\tstr\tr2, [r7, #60]\t@ 0x3c\n \tmovs\tr5, r1\n-\tstr\tr4, [r3, #60]\t@ 0x3c\n+\tstr\tr4, [r4, #60]\t@ 0x3c\n \tmovs\tr5, r1\n-\tstr\tr6, [r0, #60]\t@ 0x3c\n+\tstr\tr6, [r1, #60]\t@ 0x3c\n \tmovs\tr5, r1\n-\tstr\tr2, [r6, #56]\t@ 0x38\n+\tstr\tr2, [r7, #56]\t@ 0x38\n \tmovs\tr5, r1\n-\tldr\tr4, [r3, #28]\n+\tldr\tr0, [r5, #28]\n \tmovs\tr2, r1\n-\tstr\tr6, [r5, #52]\t@ 0x34\n+\tstr\tr6, [r6, #52]\t@ 0x34\n \tmovs\tr5, r1\n-\tldr\tr2, [r3, #20]\n+\tldr\tr6, [r4, #20]\n \tmovs\tr2, r1\n-\tstr\tr0, [r1, #48]\t@ 0x30\n+\tstr\tr0, [r2, #48]\t@ 0x30\n \tmovs\tr5, r1\n-\tldr\tr0, [r6, #12]\n+\tldr\tr4, [r7, #12]\n \tmovs\tr2, r1\n-\tstr\tr2, [r5, #40]\t@ 0x28\n+\tstr\tr2, [r6, #40]\t@ 0x28\n \tmovs\tr5, r1\n-\tldr\tr2, [r1, #8]\n+\tldr\tr6, [r2, #8]\n \tmovs\tr2, r1\n-\tstr\tr0, [r1, #36]\t@ 0x24\n+\tstr\tr0, [r2, #36]\t@ 0x24\n \tmovs\tr5, r1\n-\tldr\tr4, [r3, #0]\n+\tldr\tr0, [r5, #0]\n \tmovs\tr2, r1\n-\tstr\tr2, [r5, #28]\n+\tstr\tr2, [r6, #28]\n \tmovs\tr5, r1\n-\tldr\tr2, [sp, #144]\t@ 0x90\n+\tldr\tr2, [sp, #176]\t@ 0xb0\n \tmovs\tr3, r1\n-\tstr\tr4, [r2, #24]\n+\tstr\tr4, [r3, #24]\n \tmovs\tr5, r1\n-\tstr\tr6, [r7, #20]\n+\tstr\tr6, [r0, #24]\n \tmovs\tr5, r1\n \tldrh\tr2, [r2, #26]\n \tmovs\tr6, r2\n MIRAParameters::generateProjectNames(std::vector >&, std::__cxx11::basic_string, std::allocator >):\n ./src/mira/parameters.C:2106\n \tldr\tr2, [pc, #168]\t@ (34466c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a6838>)\n \tldr\tr3, [pc, #172]\t@ (344670 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a683c>)\n@@ -1695153,19 +1695153,19 @@\n \tb.n\t3447c2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a698e>\n \tldrh\tr0, [r4, #6]\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r0, #6]\n \tmovs\tr6, r2\n-\tstr\tr2, [r7, #68]\t@ 0x44\n+\tstr\tr6, [r0, #72]\t@ 0x48\n \tmovs\tr2, r1\n-\tldrb\tr4, [r5, r7]\n+\tldrb\tr4, [r6, r7]\n \tmovs\tr5, r1\n-\tmuls\tr6, r2\n+\tmuls\tr2, r4\n \tmovs\tr2, r1\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream() [clone .isra.0]:\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n /usr/include/c++/10/sstream:583\n@@ -1696172,35 +1696172,35 @@\n \tmovs\tr0, r0\n \tstrh\tr2, [r7, #50]\t@ 0x32\n \tmovs\tr6, r2\n \tstrh\tr0, [r1, #50]\t@ 0x32\n \tmovs\tr6, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr6, [r1, r2]\n+\tldrb\tr6, [r2, r2]\n \tmovs\tr5, r1\n-\tldrb\tr0, [r7, r1]\n+\tldrb\tr0, [r0, r2]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r0, r0]\n+\tldrb\tr6, [r1, r0]\n \tmovs\tr5, r1\n-\tldrh\tr0, [r2, r7]\n+\tldrh\tr0, [r3, r7]\n \tmovs\tr5, r1\n-\tldrb\tr6, [r6, r5]\n+\tldrb\tr6, [r7, r5]\n \tmovs\tr5, r1\n-\tldrh\tr6, [r6, r2]\n+\tldrh\tr6, [r7, r2]\n \tmovs\tr5, r1\n-\tldr\tr6, [r2, r6]\n+\tldr\tr6, [r3, r6]\n \tmovs\tr5, r1\n-\tldr\tr4, [r1, r6]\n+\tldr\tr4, [r2, r6]\n \tmovs\tr5, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsb\tr4, [r7, r4]\n+\tldrsb\tr4, [r0, r5]\n \tmovs\tr5, r1\n MIRAParameters::createAllTechString(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/parameters.C:2489\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n \tldr.w\tr3, [pc, #1996]\t@ 345780 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a794c>\n \tsub\tsp, #428\t@ 0x1ac\n@@ -1697327,47 +1697327,47 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t345750 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a791c>\n \tb.n\t3456e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a78ae>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [r4, r1]\n+\tldr\tr2, [r5, r1]\n \tmovs\tr5, r1\n \tldrb\tr6, [r2, #30]\n \tmovs\tr6, r2\n-\tldr\tr2, [r3, r1]\n+\tldr\tr2, [r4, r1]\n \tmovs\tr5, r1\n-\tldrsb\tr2, [r6, r7]\n+\tldrsb\tr2, [r7, r7]\n \tmovs\tr5, r1\n-\tldrsb\tr0, [r1, r6]\n+\tldrsb\tr0, [r2, r6]\n \tmovs\tr5, r1\n-\tldrsb\tr2, [r2, r4]\n+\tldrsb\tr2, [r3, r4]\n \tmovs\tr5, r1\n-\tldrsb\tr4, [r5, r2]\n+\tldrsb\tr4, [r6, r2]\n \tmovs\tr5, r1\n-\tldrsb\tr2, [r0, r1]\n+\tldrsb\tr2, [r1, r1]\n \tmovs\tr5, r1\n-\tstrb\tr4, [r2, r7]\n+\tstrb\tr4, [r3, r7]\n \tmovs\tr5, r1\n-\tadds\tr2, #130\t@ 0x82\n+\tadds\tr2, #138\t@ 0x8a\n \tmovs\tr3, r1\n \tldrb\tr2, [r7, #10]\n \tmovs\tr6, r2\n-\tadds\tr4, #208\t@ 0xd0\n+\tadds\tr4, #220\t@ 0xdc\n \tmovs\tr2, r1\n-\tadds\tr4, #200\t@ 0xc8\n+\tadds\tr4, #212\t@ 0xd4\n \tmovs\tr2, r1\n-\tadds\tr4, #188\t@ 0xbc\n+\tadds\tr4, #200\t@ 0xc8\n \tmovs\tr2, r1\n-\tadds\tr4, #180\t@ 0xb4\n+\tadds\tr4, #192\t@ 0xc0\n \tmovs\tr2, r1\n-\tadds\tr4, #172\t@ 0xac\n+\tadds\tr4, #184\t@ 0xb8\n \tmovs\tr2, r1\n-\tadds\tr4, #164\t@ 0xa4\n+\tadds\tr4, #176\t@ 0xb0\n \tmovs\tr2, r1\n MIRAParameters::dumpClippingParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1277\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr6, r1\n \tldr.w\tr1, [pc, #2496]\t@ 346190 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a835c>\n \tldr.w\tr3, [pc, #2496]\t@ 346194 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8360>\n@@ -1698464,233 +1698464,233 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tstrb\tr2, [r1, #30]\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr2, [r3, r3]\n+\tstr\tr2, [r4, r3]\n \tmovs\tr5, r1\n-\tstr\tr0, [r5, r3]\n+\tstr\tr0, [r6, r3]\n \tmovs\tr5, r1\n-\tstr\tr2, [r5, r3]\n+\tstr\tr2, [r6, r3]\n \tmovs\tr5, r1\n-\tstr\tr4, [r6, r1]\n+\tstr\tr4, [r7, r1]\n \tmovs\tr5, r1\n-\tstr\tr4, [r2, r3]\n+\tstr\tr4, [r3, r3]\n \tmovs\tr5, r1\n-\tstr\tr2, [r1, r1]\n+\tstr\tr2, [r2, r1]\n \tmovs\tr5, r1\n-\tstr\tr2, [r0, r3]\n+\tstr\tr2, [r1, r3]\n \tmovs\tr5, r1\n-\tstr\tr0, [r4, r0]\n+\tstr\tr0, [r5, r0]\n \tmovs\tr5, r1\n-\tstr\tr0, [r6, r2]\n+\tstr\tr0, [r7, r2]\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #984]\t@ (346598 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8764>)\n+\tldr\tr7, [pc, #1016]\t@ (3465b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8784>)\n \tmovs\tr5, r1\n-\tstr\tr2, [r4, r2]\n+\tstr\tr2, [r5, r2]\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #816]\t@ (3464f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86c4>)\n+\tldr\tr7, [pc, #848]\t@ (346518 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86e4>)\n \tmovs\tr5, r1\n-\tstr\tr4, [r2, r2]\n+\tstr\tr4, [r3, r2]\n \tmovs\tr5, r1\n-\tstrh\tr6, [r0, #38]\t@ 0x26\n+\tstrh\tr6, [r1, #38]\t@ 0x26\n \tmovs\tr3, r1\n-\tstr\tr2, [r2, r2]\n+\tstr\tr2, [r3, r2]\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #480]\t@ (3463b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8584>)\n+\tldr\tr7, [pc, #512]\t@ (3463d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a85a4>)\n \tmovs\tr5, r1\n-\tstr\tr4, [r1, r2]\n+\tstr\tr4, [r2, r2]\n \tmovs\tr5, r1\n-\tstr\tr2, [r4, r2]\n+\tstr\tr2, [r5, r2]\n \tmovs\tr5, r1\n-\tstr\tr0, [r4, r2]\n+\tstr\tr0, [r5, r2]\n \tmovs\tr5, r1\n-\tstrh\tr6, [r7, #32]\n+\tstrh\tr6, [r0, #34]\t@ 0x22\n \tmovs\tr3, r1\n-\tstr\tr6, [r1, r2]\n+\tstr\tr6, [r2, r2]\n \tmovs\tr5, r1\n-\tstr\tr0, [r1, r2]\n+\tstr\tr0, [r2, r2]\n \tmovs\tr5, r1\n-\tldr\tr6, [pc, #864]\t@ (346554 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8720>)\n+\tldr\tr6, [pc, #896]\t@ (346574 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8740>)\n \tmovs\tr5, r1\n-\tstr\tr0, [r7, r1]\n+\tstr\tr0, [r0, r2]\n \tmovs\tr5, r1\n-\tstrh\tr4, [r2, #30]\n+\tstrh\tr4, [r3, #30]\n \tmovs\tr3, r1\n-\tstr\tr0, [r6, r1]\n+\tstr\tr0, [r7, r1]\n \tmovs\tr5, r1\n-\tstr\tr2, [r6, r1]\n+\tstr\tr2, [r7, r1]\n \tmovs\tr5, r1\n-\tldr\tr6, [pc, #440]\t@ (3463c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a858c>)\n+\tldr\tr6, [pc, #472]\t@ (3463e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a85ac>)\n \tmovs\tr5, r1\n-\tstr\tr4, [r3, r1]\n+\tstr\tr4, [r4, r1]\n \tmovs\tr5, r1\n-\tstrh\tr2, [r4, #26]\n+\tstrh\tr2, [r5, #26]\n \tmovs\tr3, r1\n-\tstr\tr2, [r1, r1]\n+\tstr\tr2, [r2, r1]\n \tmovs\tr5, r1\n-\tldr\tr6, [pc, #80]\t@ (346268 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8434>)\n+\tldr\tr6, [pc, #112]\t@ (346288 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8454>)\n \tmovs\tr5, r1\n-\tstr\tr4, [r6, r0]\n+\tstr\tr4, [r7, r0]\n \tmovs\tr5, r1\n-\tldr\tr5, [pc, #936]\t@ (3465c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8794>)\n+\tldr\tr5, [pc, #968]\t@ (3465e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87b4>)\n \tmovs\tr5, r1\n-\tstr\tr2, [r4, r0]\n+\tstr\tr2, [r5, r0]\n \tmovs\tr5, r1\n-\tldr\tr5, [pc, #768]\t@ (346528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86f4>)\n+\tldr\tr5, [pc, #800]\t@ (346548 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8714>)\n \tmovs\tr5, r1\n-\tstr\tr0, [r2, r0]\n+\tstr\tr0, [r3, r0]\n \tmovs\tr5, r1\n-\tstrh\tr2, [r7, #20]\n+\tstrh\tr2, [r0, #22]\n \tmovs\tr3, r1\n-\tstr\tr6, [r0, r0]\n+\tstr\tr6, [r1, r0]\n \tmovs\tr5, r1\n-\tstrh\tr0, [r2, #20]\n+\tstrh\tr0, [r3, #20]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #992]\t@ (34661c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87e8>)\n+\tstr\tr0, [r0, r0]\n \tmovs\tr5, r1\n-\tstrh\tr6, [r4, #18]\n+\tstrh\tr6, [r5, #18]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #952]\t@ (3465fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87c8>)\n+\tldr\tr7, [pc, #984]\t@ (34661c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87e8>)\n \tmovs\tr5, r1\n-\tldr\tr5, [pc, #96]\t@ (3462a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8474>)\n+\tldr\tr5, [pc, #128]\t@ (3462c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8494>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #920]\t@ (3465e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87b0>)\n+\tldr\tr7, [pc, #952]\t@ (346604 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87d0>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #952]\t@ (346608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87d4>)\n+\tldr\tr7, [pc, #984]\t@ (346628 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87f4>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #968]\t@ (34661c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87e8>)\n+\tldr\tr7, [pc, #1000]\t@ (34663c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8808>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #984]\t@ (346630 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87fc>)\n+\tldr\tr7, [pc, #1016]\t@ (346650 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a881c>)\n \tmovs\tr5, r1\n-\tstrh\tr2, [r2, #14]\n+\tstrh\tr2, [r3, #14]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #952]\t@ (346618 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87e4>)\n+\tldr\tr7, [pc, #984]\t@ (346638 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8804>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #984]\t@ (34663c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8808>)\n+\tldr\tr7, [pc, #1016]\t@ (34665c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8828>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #1016]\t@ (346660 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a882c>)\n+\tstr\tr6, [r0, r0]\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #1016]\t@ (346664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8830>)\n+\tstr\tr6, [r0, r0]\n \tmovs\tr5, r1\n-\tstrh\tr2, [r3, #10]\n+\tstrh\tr2, [r4, #10]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #1008]\t@ (346664 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8830>)\n+\tstr\tr4, [r0, r0]\n \tmovs\tr5, r1\n-\tstrh\tr4, [r6, #8]\n+\tstrh\tr4, [r7, #8]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #976]\t@ (34664c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8818>)\n+\tldr\tr7, [pc, #1008]\t@ (34666c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8838>)\n \tmovs\tr5, r1\n-\tldr\tr3, [pc, #928]\t@ (346620 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87ec>)\n+\tldr\tr3, [pc, #960]\t@ (346640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a880c>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #928]\t@ (346624 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87f0>)\n+\tldr\tr7, [pc, #960]\t@ (346644 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8810>)\n \tmovs\tr5, r1\n-\tldr\tr3, [pc, #744]\t@ (346570 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a873c>)\n+\tldr\tr3, [pc, #776]\t@ (346590 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a875c>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #888]\t@ (346604 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87d0>)\n+\tldr\tr7, [pc, #920]\t@ (346624 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87f0>)\n \tmovs\tr5, r1\n-\tstrh\tr4, [r6, #4]\n+\tstrh\tr4, [r7, #4]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #864]\t@ (3465f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87c0>)\n+\tldr\tr7, [pc, #896]\t@ (346614 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87e0>)\n \tmovs\tr5, r1\n-\tldr\tr3, [pc, #408]\t@ (346430 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a85fc>)\n+\tldr\tr3, [pc, #440]\t@ (346450 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a861c>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #824]\t@ (3465d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87a0>)\n+\tldr\tr7, [pc, #856]\t@ (3465f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87c0>)\n \tmovs\tr5, r1\n-\tldr\tr3, [pc, #240]\t@ (346390 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a855c>)\n+\tldr\tr3, [pc, #272]\t@ (3463b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a857c>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #728]\t@ (34657c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8748>)\n+\tldr\tr7, [pc, #760]\t@ (34659c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8768>)\n \tmovs\tr5, r1\n-\tstrh\tr4, [r4, #0]\n+\tstrh\tr4, [r5, #0]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #704]\t@ (34656c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8738>)\n+\tldr\tr7, [pc, #736]\t@ (34658c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8758>)\n \tmovs\tr5, r1\n-\tldrb\tr2, [r7, #31]\n+\tstrh\tr2, [r0, #0]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #648]\t@ (34653c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8708>)\n+\tldr\tr7, [pc, #680]\t@ (34655c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8728>)\n \tmovs\tr5, r1\n-\tldr\tr2, [pc, #688]\t@ (346568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8734>)\n+\tldr\tr2, [pc, #720]\t@ (346588 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8754>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #608]\t@ (34651c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86e8>)\n+\tldr\tr7, [pc, #640]\t@ (34653c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8708>)\n \tmovs\tr5, r1\n-\tldrb\tr6, [r4, #30]\n+\tldrb\tr6, [r5, #30]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #664]\t@ (34655c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8728>)\n+\tldr\tr7, [pc, #696]\t@ (34657c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8748>)\n \tmovs\tr5, r1\n-\tldrb\tr4, [r7, #29]\n+\tldrb\tr4, [r0, #30]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #624]\t@ (34653c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8708>)\n+\tldr\tr7, [pc, #656]\t@ (34655c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8728>)\n \tmovs\tr5, r1\n-\tldrb\tr6, [r7, #28]\n+\tldrb\tr6, [r0, #29]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #576]\t@ (346514 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86e0>)\n+\tldr\tr7, [pc, #608]\t@ (346534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8700>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #560]\t@ (346508 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86d4>)\n+\tldr\tr7, [pc, #592]\t@ (346528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86f4>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #632]\t@ (346554 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8720>)\n+\tldr\tr7, [pc, #664]\t@ (346574 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8740>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #664]\t@ (346578 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8744>)\n+\tldr\tr7, [pc, #696]\t@ (346598 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8764>)\n \tmovs\tr5, r1\n-\tldr\tr1, [pc, #728]\t@ (3465bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8788>)\n+\tldr\tr1, [pc, #760]\t@ (3465dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87a8>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #592]\t@ (346538 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8704>)\n+\tldr\tr7, [pc, #624]\t@ (346558 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8724>)\n \tmovs\tr5, r1\n-\tldrb\tr0, [r4, #26]\n+\tldrb\tr0, [r5, #26]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #544]\t@ (346510 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86dc>)\n+\tldr\tr7, [pc, #576]\t@ (346530 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86fc>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #536]\t@ (34650c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86d8>)\n+\tldr\tr7, [pc, #568]\t@ (34652c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86f8>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #512]\t@ (3464f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86c4>)\n+\tldr\tr7, [pc, #544]\t@ (346518 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86e4>)\n \tmovs\tr5, r1\n-\tldr\tr1, [pc, #160]\t@ (34639c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8568>)\n+\tldr\tr1, [pc, #192]\t@ (3463bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8588>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #496]\t@ (3464f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86bc>)\n+\tldr\tr7, [pc, #528]\t@ (346510 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86dc>)\n \tmovs\tr5, r1\n-\tldr\tr1, [pc, #32]\t@ (346324 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a84f0>)\n+\tldr\tr1, [pc, #64]\t@ (346344 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8510>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #440]\t@ (3464c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a868c>)\n+\tldr\tr7, [pc, #472]\t@ (3464e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86ac>)\n \tmovs\tr5, r1\n-\tldr\tr0, [pc, #880]\t@ (34667c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8848>)\n+\tldr\tr0, [pc, #912]\t@ (34669c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8868>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #432]\t@ (3464c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a868c>)\n+\tldr\tr7, [pc, #464]\t@ (3464e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86ac>)\n \tmovs\tr5, r1\n-\tldr\tr0, [pc, #728]\t@ (3465ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87b8>)\n+\tldr\tr0, [pc, #760]\t@ (34660c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a87d8>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #424]\t@ (3464c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a868c>)\n+\tldr\tr7, [pc, #456]\t@ (3464e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86ac>)\n \tmovs\tr5, r1\n-\tldr\tr0, [pc, #576]\t@ (34655c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8728>)\n+\tldr\tr0, [pc, #608]\t@ (34657c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8748>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #400]\t@ (3464b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a867c>)\n+\tldr\tr7, [pc, #432]\t@ (3464d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a869c>)\n \tmovs\tr5, r1\n-\tldr\tr0, [pc, #424]\t@ (3464cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8698>)\n+\tldr\tr0, [pc, #456]\t@ (3464ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a86b8>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #312]\t@ (346460 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a862c>)\n+\tldr\tr7, [pc, #344]\t@ (346480 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a864c>)\n \tmovs\tr5, r1\n-\tldrb\tr2, [r3, #21]\n+\tldrb\tr2, [r4, #21]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #280]\t@ (346448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8614>)\n+\tldr\tr7, [pc, #312]\t@ (346468 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8634>)\n \tmovs\tr5, r1\n-\tldrb\tr6, [r6, #20]\n+\tldrb\tr6, [r7, #20]\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0x47ee\n+\t\t\t@ instruction: 0x47f6\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #200]\t@ (346404 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a85d0>)\n+\tldr\tr7, [pc, #232]\t@ (346424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a85f0>)\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #120]\t@ (3463b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8584>)\n+\tldr\tr7, [pc, #152]\t@ (3463d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a85a4>)\n \tmovs\tr5, r1\n-\tldrb\tr6, [r3, #19]\n+\tldrb\tr6, [r4, #19]\n \tmovs\tr3, r1\n-\tldr\tr7, [pc, #56]\t@ (346380 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a854c>)\n+\tldr\tr7, [pc, #88]\t@ (3463a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a856c>)\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0x4796\n+\t\t\t@ instruction: 0x479e\n \tmovs\tr5, r1\n-\tldr\tr6, [pc, #984]\t@ (346728 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a88f4>)\n+\tldr\tr6, [pc, #1016]\t@ (346748 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8914>)\n \tmovs\tr5, r1\n \tldr\tr6, [r0, #96]\t@ 0x60\n \tmovs\tr6, r2\n MIRAParameters::dumpLoadParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1794\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n@@ -1699538,102 +1699538,102 @@\n \tnop\n \tldr\tr0, [r7, #60]\t@ 0x3c\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [r5, #60]\t@ 0x3c\n \tmovs\tr6, r2\n-\tldr\tr4, [pc, #680]\t@ (346d70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8f3c>)\n+\tldr\tr4, [pc, #712]\t@ (346d90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8f5c>)\n \tmovs\tr5, r1\n-\tldrb\tr0, [r4, #8]\n+\tldrb\tr0, [r5, #8]\n \tmovs\tr3, r1\n-\tldr\tr4, [pc, #696]\t@ (346d88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8f54>)\n+\tldr\tr4, [pc, #728]\t@ (346da8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8f74>)\n \tmovs\tr5, r1\n-\tadds\tr1, #220\t@ 0xdc\n+\tadds\tr1, #228\t@ 0xe4\n \tmovs\tr5, r1\n-\tstmdb\tr2, {r1, r3}\n-\tadds\tr1, #34\t@ 0x22\n+\tstmdb\tsl, {r1, r3}\n+\tadds\tr1, #42\t@ 0x2a\n \tmovs\tr5, r1\n-\tldrb\tr0, [r7, #1]\n+\tldrb\tr0, [r0, #2]\n \tmovs\tr3, r1\n-\tldr\tr3, [pc, #136]\t@ (346b6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8d38>)\n+\tldr\tr3, [pc, #168]\t@ (346b8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8d58>)\n \tmovs\tr5, r1\n-\tadds\tr0, #58\t@ 0x3a\n+\tadds\tr0, #66\t@ 0x42\n \tmovs\tr5, r1\n-\tb.n\t3469c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8b90>\n+\tb.n\t3469d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a8ba0>\n \tmovs\tr2, r1\n-\tcmp\tr7, #140\t@ 0x8c\n-\tmovs\tr5, r1\n-\tcmp\tr7, #112\t@ 0x70\n+\tcmp\tr7, #148\t@ 0x94\n \tmovs\tr5, r1\n-\tcmp\tr7, #84\t@ 0x54\n+\tcmp\tr7, #120\t@ 0x78\n \tmovs\tr5, r1\n-\tcmp\tr7, #56\t@ 0x38\n+\tcmp\tr7, #92\t@ 0x5c\n \tmovs\tr5, r1\n-\tcmp\tr7, #4\n+\tcmp\tr7, #64\t@ 0x40\n \tmovs\tr5, r1\n \tcmp\tr7, #12\n \tmovs\tr5, r1\n-\tcmp\tr6, #240\t@ 0xf0\n+\tcmp\tr7, #20\n \tmovs\tr5, r1\n-\tcmp\tr7, #40\t@ 0x28\n+\tcmp\tr6, #248\t@ 0xf8\n+\tmovs\tr5, r1\n+\tcmp\tr7, #48\t@ 0x30\n \tmovs\tr5, r1\n \tldr\tr6, [r2, #0]\n \tmovs\tr6, r2\n-\tcmp\tr6, #108\t@ 0x6c\n+\tcmp\tr6, #116\t@ 0x74\n \tmovs\tr5, r1\n-\tcmp\tr6, #142\t@ 0x8e\n+\tcmp\tr6, #150\t@ 0x96\n \tmovs\tr5, r1\n-\tcmp\tr6, #116\t@ 0x74\n+\tcmp\tr6, #124\t@ 0x7c\n \tmovs\tr5, r1\n-\tcmp\tr6, #90\t@ 0x5a\n+\tcmp\tr6, #98\t@ 0x62\n \tmovs\tr5, r1\n-\tcmp\tr6, #64\t@ 0x40\n+\tcmp\tr6, #72\t@ 0x48\n \tmovs\tr5, r1\n-\tcmp\tr6, #14\n+\tcmp\tr6, #22\n \tmovs\tr5, r1\n-\tcmp\tr6, #12\n+\tcmp\tr6, #20\n \tmovs\tr5, r1\n-\tstrb\tr0, [r6, #23]\n+\tstrb\tr0, [r7, #23]\n \tmovs\tr3, r1\n-\tstrb\tr0, [r1, #21]\n+\tstrb\tr0, [r2, #21]\n \tmovs\tr3, r1\n-\tcmp\tr5, #32\n+\tcmp\tr5, #40\t@ 0x28\n \tmovs\tr5, r1\n-\tcmp\tr4, #234\t@ 0xea\n+\tcmp\tr4, #242\t@ 0xf2\n \tmovs\tr5, r1\n-\tcmp\tr4, #220\t@ 0xdc\n+\tcmp\tr4, #228\t@ 0xe4\n \tmovs\tr5, r1\n-\tcmp\tr4, #232\t@ 0xe8\n+\tcmp\tr4, #240\t@ 0xf0\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcmp\tr3, #208\t@ 0xd0\n+\tcmp\tr3, #216\t@ 0xd8\n \tmovs\tr5, r1\n-\tcmp\tr3, #236\t@ 0xec\n+\tcmp\tr3, #244\t@ 0xf4\n \tmovs\tr5, r1\n-\tcmp\tr3, #222\t@ 0xde\n+\tcmp\tr3, #230\t@ 0xe6\n \tmovs\tr5, r1\n-\tadds\tr2, r2, #0\n+\tadds\tr2, r3, #0\n \tmovs\tr3, r1\n-\tcmp\tr3, #106\t@ 0x6a\n+\tcmp\tr3, #114\t@ 0x72\n \tmovs\tr5, r1\n-\tcmp\tr3, #138\t@ 0x8a\n+\tcmp\tr3, #146\t@ 0x92\n \tmovs\tr5, r1\n-\tcmp\tr3, #124\t@ 0x7c\n+\tcmp\tr3, #132\t@ 0x84\n \tmovs\tr5, r1\n-\tsubs\tr0, r6, r6\n+\tsubs\tr0, r7, r6\n \tmovs\tr3, r1\n-\tcmp\tr3, #190\t@ 0xbe\n+\tcmp\tr3, #198\t@ 0xc6\n \tmovs\tr5, r1\n-\tsubs\tr6, r0, r6\n+\tsubs\tr6, r1, r6\n \tmovs\tr3, r1\n-\tcmp\tr3, #152\t@ 0x98\n+\tcmp\tr3, #160\t@ 0xa0\n \tmovs\tr5, r1\n-\tsubs\tr6, r3, r5\n+\tsubs\tr6, r4, r5\n \tmovs\tr3, r1\n MIRAParameters::dumpOutputCustomisationParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:633\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr3, r1\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr4, #0\n@@ -1700432,95 +1700432,95 @@\n \tb.n\t3471b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a937c>\n \tstr\tr4, [r0, #60]\t@ 0x3c\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r7, #56]\t@ 0x38\n \tmovs\tr6, r2\n-\tadd\tlr, r9\n+\tadd\tlr, sl\n \tmovs\tr5, r1\n-\tadd\tip, fp\n+\tadd\tip, ip\n \tmovs\tr5, r1\n-\tstrb\tr4, [r4, #7]\n+\tstrb\tr4, [r5, #7]\n \tmovs\tr3, r1\n-\tadd\tip, sl\n+\tadd\tip, fp\n \tmovs\tr5, r1\n-\tstrb\tr2, [r7, #6]\n+\tstrb\tr2, [r0, #7]\n \tmovs\tr3, r1\n-\tstrb\tr0, [r4, #6]\n+\tstrb\tr0, [r5, #6]\n \tmovs\tr3, r1\n-\tadd\tlr, r8\n+\tadd\tlr, r9\n \tmovs\tr5, r1\n-\tcmp\tr1, #122\t@ 0x7a\n+\tcmp\tr1, #130\t@ 0x82\n \tmovs\tr5, r1\n-\tcmp\tr1, #104\t@ 0x68\n+\tcmp\tr1, #112\t@ 0x70\n \tmovs\tr5, r1\n-\tstrb\tr0, [r2, #2]\n+\tstrb\tr0, [r3, #2]\n \tmovs\tr3, r1\n-\tmvns\tr2, r3\n+\tmvns\tr2, r4\n \tmovs\tr5, r1\n-\tcmp\tr0, #106\t@ 0x6a\n+\tcmp\tr0, #114\t@ 0x72\n \tmovs\tr5, r1\n-\tcmp\tr0, #88\t@ 0x58\n-\tmovs\tr5, r1\n-\tmovs\tr7, #250\t@ 0xfa\n+\tcmp\tr0, #96\t@ 0x60\n \tmovs\tr5, r1\n-\tmovs\tr7, #222\t@ 0xde\n+\tcmp\tr0, #2\n \tmovs\tr5, r1\n-\tmovs\tr7, #194\t@ 0xc2\n+\tmovs\tr7, #230\t@ 0xe6\n \tmovs\tr5, r1\n-\tmovs\tr7, #142\t@ 0x8e\n+\tmovs\tr7, #202\t@ 0xca\n \tmovs\tr5, r1\n \tmovs\tr7, #150\t@ 0x96\n \tmovs\tr5, r1\n-\tmovs\tr7, #122\t@ 0x7a\n+\tmovs\tr7, #158\t@ 0x9e\n+\tmovs\tr5, r1\n+\tmovs\tr7, #130\t@ 0x82\n \tmovs\tr5, r1\n \tstr\tr6, [r1, #8]\n \tmovs\tr6, r2\n-\tmovs\tr7, #8\n+\tmovs\tr7, #16\n \tmovs\tr5, r1\n-\tmovs\tr6, #238\t@ 0xee\n+\tmovs\tr6, #246\t@ 0xf6\n \tmovs\tr5, r1\n-\tmovs\tr6, #212\t@ 0xd4\n+\tmovs\tr6, #220\t@ 0xdc\n \tmovs\tr5, r1\n-\tmovs\tr6, #186\t@ 0xba\n+\tmovs\tr6, #194\t@ 0xc2\n \tmovs\tr5, r1\n-\tmovs\tr6, #160\t@ 0xa0\n+\tmovs\tr6, #168\t@ 0xa8\n \tmovs\tr5, r1\n-\tmovs\tr6, #134\t@ 0x86\n+\tmovs\tr6, #142\t@ 0x8e\n \tmovs\tr5, r1\n-\tldr\tr2, [r0, #104]\t@ 0x68\n+\tldr\tr2, [r1, #104]\t@ 0x68\n \tmovs\tr3, r1\n-\tldr\tr0, [r2, #92]\t@ 0x5c\n+\tldr\tr0, [r3, #92]\t@ 0x5c\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tmovs\tr4, #12\n+\tmovs\tr4, #20\n \tmovs\tr5, r1\n-\tmovs\tr4, #44\t@ 0x2c\n+\tmovs\tr4, #52\t@ 0x34\n \tmovs\tr5, r1\n-\tmovs\tr4, #30\n+\tmovs\tr4, #38\t@ 0x26\n \tmovs\tr5, r1\n-\tasrs\tr2, r2, #17\n+\tasrs\tr2, r3, #17\n \tmovs\tr3, r1\n-\tmovs\tr3, #166\t@ 0xa6\n+\tmovs\tr3, #174\t@ 0xae\n \tmovs\tr5, r1\n-\tmovs\tr3, #198\t@ 0xc6\n+\tmovs\tr3, #206\t@ 0xce\n \tmovs\tr5, r1\n-\tmovs\tr3, #184\t@ 0xb8\n+\tmovs\tr3, #192\t@ 0xc0\n \tmovs\tr5, r1\n-\tasrs\tr4, r5, #15\n+\tasrs\tr4, r6, #15\n \tmovs\tr3, r1\n-\tmovs\tr3, #250\t@ 0xfa\n+\tmovs\tr4, #2\n \tmovs\tr5, r1\n-\tasrs\tr2, r0, #15\n+\tasrs\tr2, r1, #15\n \tmovs\tr3, r1\n-\tmovs\tr3, #196\t@ 0xc4\n+\tmovs\tr3, #204\t@ 0xcc\n \tmovs\tr5, r1\n-\tasrs\tr4, r1, #14\n+\tasrs\tr4, r2, #14\n \tmovs\tr3, r1\n MIRAParameters::dumpEditParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:890\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr.w\tr5, [pc, #1836]\t@ 347a5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a9c28>\n \tvpush\t{d8}\n@@ -1701355,111 +1701355,111 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldrb\tr4, [r4, r0]\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr2, [r3, r0]\n \tmovs\tr6, r2\n-\tsubs\tr5, #210\t@ 0xd2\n+\tsubs\tr5, #218\t@ 0xda\n \tmovs\tr5, r1\n-\tldr\tr0, [r1, #36]\t@ 0x24\n+\tldr\tr0, [r2, #36]\t@ 0x24\n \tmovs\tr3, r1\n-\tsubs\tr5, #206\t@ 0xce\n+\tsubs\tr5, #214\t@ 0xd6\n \tmovs\tr5, r1\n-\tmovs\tr1, #238\t@ 0xee\n+\tmovs\tr1, #246\t@ 0xf6\n \tmovs\tr5, r1\n-\tbls.n\t347abc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a9c88>\n+\tbls.n\t347acc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a9c98>\n \tmovs\tr2, r1\n-\tmovs\tr1, #76\t@ 0x4c\n+\tmovs\tr1, #84\t@ 0x54\n \tmovs\tr5, r1\n-\tsubs\tr4, #86\t@ 0x56\n+\tsubs\tr4, #94\t@ 0x5e\n \tmovs\tr5, r1\n-\tldr\tr6, [r4, #8]\n+\tldr\tr6, [r5, #8]\n \tmovs\tr3, r1\n-\tadds\tr3, #104\t@ 0x68\n+\tadds\tr3, #112\t@ 0x70\n \tmovs\tr5, r1\n-\tsubs\tr4, #82\t@ 0x52\n+\tsubs\tr4, #90\t@ 0x5a\n \tmovs\tr5, r1\n-\tmovs\tr0, #190\t@ 0xbe\n+\tmovs\tr0, #198\t@ 0xc6\n \tmovs\tr5, r1\n-\tbvc.n\t347a78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a9c44>\n+\tbvc.n\t347a88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a9c54>\n \tmovs\tr2, r1\n-\tmovs\tr0, #16\n-\tmovs\tr5, r1\n-\tsubs\tr4, r6, #7\n+\tmovs\tr0, #24\n \tmovs\tr5, r1\n-\tsubs\tr0, r3, #7\n+\tsubs\tr4, r7, #7\n \tmovs\tr5, r1\n-\tsubs\tr4, r7, #6\n+\tsubs\tr0, r4, #7\n \tmovs\tr5, r1\n-\tsubs\tr0, r1, #6\n+\tsubs\tr4, r0, #7\n \tmovs\tr5, r1\n \tsubs\tr0, r2, #6\n \tmovs\tr5, r1\n-\tsubs\tr4, r6, #5\n+\tsubs\tr0, r3, #6\n \tmovs\tr5, r1\n-\tsubs\tr4, r5, #6\n+\tsubs\tr4, r7, #5\n \tmovs\tr5, r1\n-\tsubs\tr3, #0\n+\tsubs\tr4, r6, #6\n \tmovs\tr5, r1\n-\tadds\tr1, #232\t@ 0xe8\n+\tsubs\tr3, #8\n+\tmovs\tr5, r1\n+\tadds\tr1, #240\t@ 0xf0\n \tmovs\tr5, r1\n \tldr\tr2, [r6, r1]\n \tmovs\tr6, r2\n-\tsubs\tr6, r0, #3\n+\tsubs\tr6, r1, #3\n \tmovs\tr5, r1\n-\tsubs\tr0, r5, #3\n+\tsubs\tr0, r6, #3\n \tmovs\tr5, r1\n-\tsubs\tr6, r1, #3\n+\tsubs\tr6, r2, #3\n \tmovs\tr5, r1\n-\tsubs\tr4, r6, #2\n+\tsubs\tr4, r7, #2\n \tmovs\tr5, r1\n-\tsubs\tr2, r3, #2\n+\tsubs\tr2, r4, #2\n \tmovs\tr5, r1\n-\tsubs\tr0, r5, #1\n+\tsubs\tr0, r6, #1\n \tmovs\tr5, r1\n-\tsubs\tr6, r4, #1\n+\tsubs\tr6, r5, #1\n \tmovs\tr5, r1\n-\tstr\tr4, [r1, #100]\t@ 0x64\n+\tstr\tr4, [r2, #100]\t@ 0x64\n \tmovs\tr3, r1\n-\tadds\tr0, #128\t@ 0x80\n+\tadds\tr0, #136\t@ 0x88\n \tmovs\tr5, r1\n-\tadds\tr4, r7, #5\n+\tadds\tr4, r0, #6\n \tmovs\tr5, r1\n-\tadds\tr6, r3, #5\n+\tadds\tr6, r4, #5\n \tmovs\tr5, r1\n-\tadds\tr2, r7, #4\n+\tadds\tr2, r0, #5\n \tmovs\tr5, r1\n-\tadds\tr6, r5, #4\n+\tadds\tr6, r6, #4\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadds\tr4, r4, #0\n+\tadds\tr4, r5, #0\n \tmovs\tr5, r1\n-\tadds\tr4, r0, #1\n+\tadds\tr4, r1, #1\n \tmovs\tr5, r1\n-\tadds\tr6, r6, #0\n+\tadds\tr6, r7, #0\n \tmovs\tr5, r1\n-\tlsrs\tr2, r5, #17\n+\tlsrs\tr2, r6, #17\n \tmovs\tr3, r1\n-\tsubs\tr2, r0, r7\n+\tsubs\tr2, r1, r7\n \tmovs\tr5, r1\n-\tsubs\tr2, r4, r7\n+\tsubs\tr2, r5, r7\n \tmovs\tr5, r1\n-\tsubs\tr4, r2, r7\n+\tsubs\tr4, r3, r7\n \tmovs\tr5, r1\n-\tlsrs\tr0, r1, #16\n+\tlsrs\tr0, r2, #16\n \tmovs\tr3, r1\n-\tadds\tr6, r2, #0\n+\tadds\tr6, r3, #0\n \tmovs\tr5, r1\n-\tlsrs\tr6, r3, #15\n+\tlsrs\tr6, r4, #15\n \tmovs\tr3, r1\n-\tsubs\tr0, r6, r7\n+\tsubs\tr0, r7, r7\n \tmovs\tr5, r1\n-\tlsrs\tr0, r7, #14\n+\tlsrs\tr0, r0, #15\n \tmovs\tr3, r1\n MIRAParameters::dumpDataProcessingParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1575\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr.w\tr4, [pc, #1100]\t@ 347f80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aa14c>\n \tvpush\t{d8}\n@@ -1701971,69 +1701971,69 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tstrb\tr0, [r4, r0]\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr4, [r2, r0]\n \tmovs\tr6, r2\n-\tadds\tr6, #104\t@ 0x68\n+\tadds\tr6, #112\t@ 0x70\n \tmovs\tr5, r1\n-\tstr\tr6, [r0, #36]\t@ 0x24\n+\tstr\tr6, [r1, #36]\t@ 0x24\n \tmovs\tr3, r1\n-\tadds\tr6, #114\t@ 0x72\n+\tadds\tr6, #122\t@ 0x7a\n \tmovs\tr5, r1\n-\tsubs\tr4, r0, r0\n+\tsubs\tr4, r1, r0\n \tmovs\tr5, r1\n-\tbne.n\t347ff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aa1c0>\n+\tbne.n\t348004 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aa1d0>\n \tmovs\tr2, r1\n-\tadds\tr4, r2, r5\n+\tadds\tr4, r3, r5\n \tmovs\tr5, r1\n-\tadds\tr5, #12\n+\tadds\tr5, #20\n \tmovs\tr5, r1\n-\tadds\tr5, #28\n+\tadds\tr5, #36\t@ 0x24\n \tmovs\tr5, r1\n-\tadds\tr5, #46\t@ 0x2e\n+\tadds\tr5, #54\t@ 0x36\n \tmovs\tr5, r1\n-\tadds\tr5, #50\t@ 0x32\n+\tadds\tr5, #58\t@ 0x3a\n \tmovs\tr5, r1\n \tstr\tr6, [r4, r7]\n \tmovs\tr6, r2\n-\tadds\tr4, r5, r1\n+\tadds\tr4, r6, r1\n \tmovs\tr5, r1\n-\tadds\tr2, r2, r1\n+\tadds\tr2, r3, r1\n \tmovs\tr5, r1\n-\tadds\tr0, r7, r0\n+\tadds\tr0, r0, r1\n \tmovs\tr5, r1\n-\tadds\tr6, r3, r0\n+\tadds\tr6, r4, r0\n \tmovs\tr5, r1\n-\tasrs\tr4, r5, #31\n+\tasrs\tr4, r6, #31\n \tmovs\tr5, r1\n-\tasrs\tr6, r6, #31\n+\tasrs\tr6, r7, #31\n \tmovs\tr5, r1\n-\tasrs\tr4, r3, #31\n+\tasrs\tr4, r4, #31\n \tmovs\tr5, r1\n-\tldrsh\tr4, [r1, r7]\n+\tldrsh\tr4, [r2, r7]\n \tmovs\tr3, r1\n-\tasrs\tr4, r4, #30\n+\tasrs\tr4, r5, #30\n \tmovs\tr5, r1\n-\tasrs\tr0, r0, #30\n+\tasrs\tr0, r1, #30\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tasrs\tr0, r0, #26\n+\tasrs\tr0, r1, #26\n \tmovs\tr5, r1\n-\tasrs\tr4, r3, #26\n+\tasrs\tr4, r4, #26\n \tmovs\tr5, r1\n-\tasrs\tr6, r1, #26\n+\tasrs\tr6, r2, #26\n \tmovs\tr5, r1\n-\tlsls\tr2, r0, #27\n+\tlsls\tr2, r1, #27\n \tmovs\tr3, r1\n-\tasrs\tr6, r1, #27\n+\tasrs\tr6, r2, #27\n \tmovs\tr5, r1\n-\tlsls\tr4, r2, #26\n+\tlsls\tr4, r3, #26\n \tmovs\tr3, r1\n MIRAParameters::dumpDirectoryParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:845\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #2664]\t@ 348a6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aac38>\n \tvpush\t{d8-d9}\n \tsub\tsp, #68\t@ 0x44\n@@ -1703208,128 +1703208,128 @@\n \tnop\n \tldr\tr7, [pc, #328]\t@ (348bb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aad84>)\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr7, [pc, #304]\t@ (348ba8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aad74>)\n \tmovs\tr6, r2\n-\tadds\tr2, #94\t@ 0x5e\n+\tadds\tr2, #102\t@ 0x66\n \tmovs\tr5, r1\n-\tldrb\tr4, [r6, r5]\n+\tldrb\tr4, [r7, r5]\n \tmovs\tr3, r1\n-\tadds\tr2, #90\t@ 0x5a\n+\tadds\tr2, #98\t@ 0x62\n \tmovs\tr5, r1\n-\tasrs\tr0, r2, #21\n+\tasrs\tr0, r3, #21\n \tmovs\tr5, r1\n-\tasrs\tr6, r7, #20\n+\tasrs\tr6, r0, #21\n \tmovs\tr5, r1\n-\tadds\tr1, #110\t@ 0x6e\n+\tadds\tr1, #118\t@ 0x76\n \tmovs\tr5, r1\n-\tldrb\tr4, [r2, r1]\n+\tldrb\tr4, [r3, r1]\n \tmovs\tr3, r1\n-\tldrb\tr2, [r7, r0]\n+\tldrb\tr2, [r0, r1]\n \tmovs\tr3, r1\n-\tadds\tr1, #92\t@ 0x5c\n-\tmovs\tr5, r1\n-\tasrs\tr6, r1, #16\n+\tadds\tr1, #100\t@ 0x64\n \tmovs\tr5, r1\n-\tasrs\tr4, r1, #16\n+\tasrs\tr6, r2, #16\n \tmovs\tr5, r1\n-\tasrs\tr2, r3, #14\n+\tasrs\tr4, r2, #16\n \tmovs\tr5, r1\n-\tasrs\tr6, r7, #13\n+\tasrs\tr2, r4, #14\n \tmovs\tr5, r1\n-\tasrs\tr2, r4, #13\n+\tasrs\tr6, r0, #14\n \tmovs\tr5, r1\n-\tasrs\tr6, r5, #12\n+\tasrs\tr2, r5, #13\n \tmovs\tr5, r1\n \tasrs\tr6, r6, #12\n \tmovs\tr5, r1\n-\tasrs\tr2, r3, #12\n+\tasrs\tr6, r7, #12\n \tmovs\tr5, r1\n-\tcmp\tr7, #244\t@ 0xf4\n+\tasrs\tr2, r4, #12\n \tmovs\tr5, r1\n-\tldrh\tr0, [r4, r2]\n+\tcmp\tr7, #252\t@ 0xfc\n+\tmovs\tr5, r1\n+\tldrh\tr0, [r5, r2]\n \tmovs\tr3, r1\n-\tcmp\tr7, #224\t@ 0xe0\n+\tcmp\tr7, #232\t@ 0xe8\n \tmovs\tr5, r1\n-\tldrh\tr2, [r6, r1]\n+\tldrh\tr2, [r7, r1]\n \tmovs\tr3, r1\n-\tldrh\tr0, [r3, r1]\n+\tldrh\tr0, [r4, r1]\n \tmovs\tr3, r1\n-\tcmp\tr7, #202\t@ 0xca\n+\tcmp\tr7, #210\t@ 0xd2\n \tmovs\tr5, r1\n-\tasrs\tr0, r6, #8\n+\tasrs\tr0, r7, #8\n \tmovs\tr5, r1\n-\tasrs\tr6, r3, #8\n+\tasrs\tr6, r4, #8\n \tmovs\tr5, r1\n-\tasrs\tr6, r1, #7\n+\tasrs\tr6, r2, #7\n \tmovs\tr5, r1\n-\tasrs\tr2, r6, #6\n+\tasrs\tr2, r7, #6\n \tmovs\tr5, r1\n-\tasrs\tr6, r2, #6\n+\tasrs\tr6, r3, #6\n \tmovs\tr5, r1\n-\tasrs\tr2, r7, #5\n+\tasrs\tr2, r0, #6\n \tmovs\tr5, r1\n-\tasrs\tr6, r3, #5\n+\tasrs\tr6, r4, #5\n \tmovs\tr5, r1\n-\tasrs\tr2, r0, #5\n+\tasrs\tr2, r1, #5\n \tmovs\tr5, r1\n \tldr\tr2, [pc, #328]\t@ (348c40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aae0c>)\n \tmovs\tr6, r2\n-\tasrs\tr6, r4, #2\n+\tasrs\tr6, r5, #2\n \tmovs\tr5, r1\n-\tasrs\tr2, r1, #2\n+\tasrs\tr2, r2, #2\n \tmovs\tr5, r1\n-\tasrs\tr6, r5, #1\n+\tasrs\tr6, r6, #1\n \tmovs\tr5, r1\n-\tasrs\tr4, r1, #2\n+\tasrs\tr4, r2, #2\n \tmovs\tr5, r1\n-\tasrs\tr0, r6, #1\n+\tasrs\tr0, r7, #1\n \tmovs\tr5, r1\n-\tasrs\tr4, r2, #1\n+\tasrs\tr4, r3, #1\n \tmovs\tr5, r1\n-\tldr\tr0, [r7, r0]\n+\tldr\tr0, [r0, r1]\n \tmovs\tr3, r1\n-\tldrsb\tr2, [r6, r5]\n+\tldrsb\tr2, [r7, r5]\n \tmovs\tr3, r1\n-\tldrsb\tr6, [r5, r2]\n+\tldrsb\tr6, [r6, r2]\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsrs\tr4, r3, #18\n+\tlsrs\tr4, r4, #18\n \tmovs\tr5, r1\n-\tlsrs\tr4, r7, #18\n+\tlsrs\tr4, r0, #19\n \tmovs\tr5, r1\n-\tlsrs\tr6, r5, #18\n+\tlsrs\tr6, r6, #18\n \tmovs\tr5, r1\n-\tstc2l\t0, cr0, [r2], #40\t@ 0x28\n-\tlsrs\tr2, r7, #16\n+\tstc2l\t0, cr0, [sl], #40\t@ 0x28\n+\tlsrs\tr2, r0, #17\n \tmovs\tr5, r1\n-\tlsrs\tr2, r3, #17\n+\tlsrs\tr2, r4, #17\n \tmovs\tr5, r1\n-\tlsrs\tr4, r1, #17\n+\tlsrs\tr4, r2, #17\n \tmovs\tr5, r1\n-\tstc2\t0, cr0, [r0], {10}\n-\tlsrs\tr2, r3, #15\n+\tstc2\t0, cr0, [r8], {10}\n+\tlsrs\tr2, r4, #15\n \tmovs\tr5, r1\n-\tlsrs\tr2, r7, #15\n+\tlsrs\tr2, r0, #16\n \tmovs\tr5, r1\n-\tlsrs\tr4, r5, #15\n+\tlsrs\tr4, r6, #15\n \tmovs\tr5, r1\n-\tstc2\t0, cr0, [r0], #-40\t@ 0xffffffd8\n-\tlsrs\tr6, r5, #16\n+\tstc2\t0, cr0, [r8], #-40\t@ 0xffffffd8\n+\tlsrs\tr6, r6, #16\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xfbf6000a\n-\tlsrs\tr0, r7, #15\n+\t\t\t@ instruction: 0xfbfe000a\n+\tlsrs\tr0, r0, #16\n \tmovs\tr5, r1\n-\tsmlal\tr0, r0, r0, sl\n-\tlsrs\tr2, r2, #15\n+\tsmlal\tr0, r0, r8, sl\n+\tlsrs\tr2, r3, #15\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xfb9a000a\n+\tumull\tr0, r0, r2, sl\n MIRAParameters::dumpStrainBackboneParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1614\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr4, [pc, #1796]\t@ 349274 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab440>\n \tvpush\t{d8-d9}\n \tsub\tsp, #68\t@ 0x44\n@@ -1704126,96 +1704126,96 @@\n \tb.n\t3491ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab378>\n \tmvns\tr4, r4\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmvns\tr2, r3\n \tmovs\tr6, r2\n-\tmovs\tr7, #182\t@ 0xb6\n+\tmovs\tr7, #190\t@ 0xbe\n \tmovs\tr5, r1\n-\tstr\tr4, [r7, r7]\n+\tstrh\tr4, [r0, r0]\n \tmovs\tr3, r1\n-\tmovs\tr7, #190\t@ 0xbe\n+\tmovs\tr7, #198\t@ 0xc6\n \tmovs\tr5, r1\n-\tstr\tr4, [r3, r7]\n+\tstr\tr4, [r4, r7]\n \tmovs\tr3, r1\n-\tmovs\tr7, #182\t@ 0xb6\n+\tmovs\tr7, #190\t@ 0xbe\n \tmovs\tr5, r1\n-\tlsrs\tr4, r6, #6\n+\tlsrs\tr4, r7, #6\n \tmovs\tr5, r1\n-\tlsrs\tr2, r4, #6\n+\tlsrs\tr2, r5, #6\n \tmovs\tr5, r1\n-\tstr\tr2, [r2, r3]\n+\tstr\tr2, [r3, r3]\n \tmovs\tr3, r1\n-\tmovs\tr6, #212\t@ 0xd4\n-\tmovs\tr5, r1\n-\tlsrs\tr0, r5, #2\n+\tmovs\tr6, #220\t@ 0xdc\n \tmovs\tr5, r1\n-\tlsrs\tr6, r2, #2\n+\tlsrs\tr0, r6, #2\n \tmovs\tr5, r1\n-\tlsrs\tr0, r7, #32\n+\tlsrs\tr6, r3, #2\n \tmovs\tr5, r1\n-\tlsrs\tr4, r3, #32\n+\tlsrs\tr0, r0, #1\n \tmovs\tr5, r1\n-\tlsrs\tr0, r0, #32\n+\tlsrs\tr4, r4, #32\n \tmovs\tr5, r1\n-\tlsls\tr4, r1, #31\n+\tlsrs\tr0, r1, #32\n \tmovs\tr5, r1\n \tlsls\tr4, r2, #31\n \tmovs\tr5, r1\n-\tlsls\tr0, r7, #30\n+\tlsls\tr4, r3, #31\n+\tmovs\tr5, r1\n+\tlsls\tr0, r0, #31\n \tmovs\tr5, r1\n-\tmovs\tr5, #118\t@ 0x76\n+\tmovs\tr5, #126\t@ 0x7e\n \tmovs\tr5, r1\n-\tmovs\tr5, #122\t@ 0x7a\n+\tmovs\tr5, #130\t@ 0x82\n \tmovs\tr5, r1\n-\tmovs\tr5, #120\t@ 0x78\n+\tmovs\tr5, #128\t@ 0x80\n \tmovs\tr5, r1\n-\tldr\tr7, [pc, #32]\t@ (3492f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab4c0>)\n+\tldr\tr7, [pc, #64]\t@ (349314 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab4e0>)\n \tmovs\tr3, r1\n \teors\tr4, r5\n \tmovs\tr6, r2\n-\tlsls\tr4, r4, #27\n+\tlsls\tr4, r5, #27\n \tmovs\tr5, r1\n-\tlsls\tr2, r1, #27\n+\tlsls\tr2, r2, #27\n \tmovs\tr5, r1\n-\tlsls\tr0, r6, #26\n+\tlsls\tr0, r7, #26\n \tmovs\tr5, r1\n-\tlsls\tr6, r2, #26\n+\tlsls\tr6, r3, #26\n \tmovs\tr5, r1\n-\tlsls\tr4, r7, #25\n+\tlsls\tr4, r0, #26\n \tmovs\tr5, r1\n-\tlsls\tr2, r4, #25\n+\tlsls\tr2, r5, #25\n \tmovs\tr5, r1\n-\tldr\tr6, [pc, #376]\t@ (34946c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab638>)\n+\tldr\tr6, [pc, #408]\t@ (34948c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab658>)\n \tmovs\tr3, r1\n-\tldr\tr5, [pc, #744]\t@ (3495e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab7ac>)\n+\tldr\tr5, [pc, #776]\t@ (349600 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ab7cc>)\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsls\tr0, r2, #16\n+\tlsls\tr0, r3, #16\n \tmovs\tr5, r1\n-\tlsls\tr0, r6, #16\n+\tlsls\tr0, r7, #16\n \tmovs\tr5, r1\n-\tlsls\tr2, r4, #16\n+\tlsls\tr2, r5, #16\n \tmovs\tr5, r1\n-\torrs.w\tr0, r6, #9043968\t@ 0x8a0000\n-\tlsls\tr2, r5, #14\n+\torrs.w\tr0, lr, #9043968\t@ 0x8a0000\n+\tlsls\tr2, r6, #14\n \tmovs\tr5, r1\n-\tlsls\tr2, r1, #15\n+\tlsls\tr2, r2, #15\n \tmovs\tr5, r1\n-\tlsls\tr4, r7, #14\n+\tlsls\tr4, r0, #15\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xf3f0000a\n-\tlsls\tr6, r7, #15\n+\t\t\t@ instruction: 0xf3f8000a\n+\tlsls\tr6, r0, #16\n \tmovs\tr5, r1\n-\tubfx\tr0, r6, #0, #11\n-\tlsls\tr0, r1, #15\n+\tubfx\tr0, lr, #0, #11\n+\tlsls\tr0, r2, #15\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xf390000a\n+\t\t\t@ instruction: 0xf398000a\n MIRAParameters::dumpMiscParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1872\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr.w\tr5, [pc, #1936]\t@ 349ac4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abc90>\n \tvpush\t{d8}\n \tsub\tsp, #60\t@ 0x3c\n@@ -1705096,89 +1705096,89 @@\n \tnop\n \tsubs\tr4, #32\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr4, #24\n \tmovs\tr6, r2\n-\tmovs\tr0, #224\t@ 0xe0\n+\tmovs\tr0, #232\t@ 0xe8\n \tmovs\tr5, r1\n-\tmovs\tr0, #220\t@ 0xdc\n+\tmovs\tr0, #228\t@ 0xe4\n \tmovs\tr5, r1\n-\tmovs\tr0, #222\t@ 0xde\n+\tmovs\tr0, #230\t@ 0xe6\n \tmovs\tr5, r1\n-\tldr\tr2, [pc, #16]\t@ (349af0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abcbc>)\n+\tldr\tr2, [pc, #48]\t@ (349b10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abcdc>)\n \tmovs\tr3, r1\n-\tmovs\tr0, #206\t@ 0xce\n+\tmovs\tr0, #214\t@ 0xd6\n \tmovs\tr5, r1\n-\tlsls\tr0, r7, #6\n+\tlsls\tr0, r0, #7\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xb8ea\n+\t\t\t@ instruction: 0xb8f2\n \tmovs\tr2, r1\n-\tlsls\tr6, r2, #4\n+\tlsls\tr6, r3, #4\n \tmovs\tr5, r1\n-\tsubs\tr4, r3, #5\n+\tsubs\tr4, r4, #5\n \tmovs\tr5, r1\n-\tldr\tr0, [pc, #392]\t@ (349c80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abe4c>)\n+\tldr\tr0, [pc, #424]\t@ (349ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abe6c>)\n \tmovs\tr3, r1\n-\tsubs\tr2, r3, #5\n+\tsubs\tr2, r4, #5\n \tmovs\tr5, r1\n-\tldr\tr0, [pc, #224]\t@ (349be0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abdac>)\n+\tldr\tr0, [pc, #256]\t@ (349c00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abdcc>)\n \tmovs\tr3, r1\n-\tldr\tr0, [pc, #128]\t@ (349b84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abd50>)\n+\tldr\tr0, [pc, #160]\t@ (349ba4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abd70>)\n \tmovs\tr3, r1\n-\tsubs\tr6, r2, #5\n+\tsubs\tr6, r3, #5\n \tmovs\tr5, r1\n-\tlsls\tr4, r2, #1\n+\tlsls\tr4, r3, #1\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xb786\n+\t\t\t@ instruction: 0xb78e\n \tmovs\tr2, r1\n-\tvaddl.u32\tq0, d6, d12\n-\tvaddl.u8\tq0, d10, d12\n-\tvhadd.u32\td16, d14, d12\n-\tvhadd.u16\td16, d2, d12\n-\tvhadd.u16\td0, d14, d12\n+\tvaddl.u32\tq0, d14, d12\n+\tvaddl.u16\tq0, d2, d12\n+\tvhadd.u\td16, d6, d12\n+\tvhadd.u16\td16, d10, d12\n \tvhadd.u32\td0, d6, d12\n-\tvhadd.u8\td0, d10, d12\n-\tvhadd.u8\td16, d2, d12\n-\tmov\tr8, r5\n+\tvhadd.u32\td0, d14, d12\n+\tvhadd.u16\td0, d2, d12\n+\tvhadd.u8\td16, d10, d12\n+\tmov\tr8, r6\n \tmovs\tr3, r1\n-\tsubs\tr0, r2, #0\n+\tsubs\tr0, r3, #0\n \tmovs\tr5, r1\n \tsubs\tr0, #8\n \tmovs\tr6, r2\n-\tcdp2\t0, 5, cr0, cr14, cr12, {0}\n-\tcdp2\t0, 8, cr0, cr0, cr12, {0}\n \tcdp2\t0, 6, cr0, cr6, cr12, {0}\n-\tcdp2\t0, 4, cr0, cr12, cr12, {0}\n-\tcdp2\t0, 3, cr0, cr2, cr12, {0}\n-\tcdp2\t0, 0, cr0, cr0, cr12, {0}\n-\tldc2l\t0, cr0, [lr, #48]!\t@ 0x30\n-\tcmp\tip, ip\n+\tcdp2\t0, 8, cr0, cr8, cr12, {0}\n+\tcdp2\t0, 6, cr0, cr14, cr12, {0}\n+\tcdp2\t0, 5, cr0, cr4, cr12, {0}\n+\tcdp2\t0, 3, cr0, cr10, cr12, {0}\n+\tcdp2\t0, 0, cr0, cr8, cr12, {0}\n+\tcdp2\t0, 0, cr0, cr6, cr12, {0}\n+\tcmp\tip, sp\n \tmovs\tr3, r1\n-\tcmp\tr4, r7\n+\tcmp\tr4, r8\n \tmovs\tr3, r1\n-\tldc2\t0, cr0, [r4, #-48]\t@ 0xffffffd0\n-\tldc2l\t0, cr0, [r6], #48\t@ 0x30\n-\tldc2l\t0, cr0, [r2], {12}\n-\tstc2l\t0, cr0, [r6], {12}\n+\tldc2\t0, cr0, [ip, #-48]\t@ 0xffffffd0\n+\tldc2l\t0, cr0, [lr], #48\t@ 0x30\n+\tldc2l\t0, cr0, [sl], {12}\n+\tstc2l\t0, cr0, [lr], {12}\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tsmlal\tr0, r0, r2, ip\n-\tumlal\tr0, r0, r2, ip\n-\t\t\t@ instruction: 0xfbd4000c\n-\tstc\t0, cr0, [r8], {10}\n-\tsmmla\tr0, ip, ip, r0\n-\tusada8\tr0, ip, ip, r0\n-\tsmmls\tr0, lr, ip, r0\n-\tsub.w\tr0, r2, sl\n-\t\t\t@ instruction: 0xfbb0000c\n-\tsbcs.w\tr0, r8, sl\n-\tsmull\tr0, r0, sl, ip\n-\tadcs.w\tr0, r2, sl\n+\tsmlal\tr0, r0, sl, ip\n+\tumlal\tr0, r0, sl, ip\n+\t\t\t@ instruction: 0xfbdc000c\n+\tldc\t0, cr0, [r0], {10}\n+\tsmmls\tr0, r4, ip, r0\n+\tsmull\tr0, r0, r4, ip\n+\tusada8\tr0, r6, ip, r0\n+\tsub.w\tr0, sl, sl\n+\t\t\t@ instruction: 0xfbb8000c\n+\t\t\t@ instruction: 0xeb80000a\n+\t\t\t@ instruction: 0xfb92000c\n+\tadcs.w\tr0, sl, sl\n MIRAParameters::dumpNagAndWarnParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1921\n \tpush\t{r4, r5, r6, r7, lr}\n /usr/include/c++/10/bits/stl_vector.h:98\n \tmovs\tr4, #0\n ./src/mira/parameters.C:1921\n \tldr\tr6, [pc, #348]\t@ (349d08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1abed4>)\n@@ -1705382,33 +1705382,33 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tadds\tr3, #178\t@ 0xb2\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadds\tr6, r5, r5\n-\tmovs\tr5, r1\n-\tadds\tr4, r6, r5\n+\tadds\tr6, r6, r5\n \tmovs\tr5, r1\n-\tadds\tr0, r6, r5\n+\tadds\tr4, r7, r5\n \tmovs\tr5, r1\n \tadds\tr0, r7, r5\n \tmovs\tr5, r1\n \tadds\tr0, r0, r6\n \tmovs\tr5, r1\n-\tadds\tr4, r0, r6\n+\tadds\tr0, r1, r6\n \tmovs\tr5, r1\n-\tadds\tr0, r2, r6\n+\tadds\tr4, r1, r6\n \tmovs\tr5, r1\n-\tadds\tr6, r3, r6\n+\tadds\tr0, r3, r6\n \tmovs\tr5, r1\n-\tadds\tr4, r4, r6\n+\tadds\tr6, r4, r6\n \tmovs\tr5, r1\n-\tadds\tr2, r5, r6\n+\tadds\tr4, r5, r6\n+\tmovs\tr5, r1\n+\tadds\tr2, r6, r6\n \tmovs\tr5, r1\n \tadds\tr2, #140\t@ 0x8c\n \tmovs\tr6, r2\n MIRAParameters::dumpGeneralParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1822\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n@@ -1706029,67 +1706029,67 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tadds\tr2, #16\n \tmovs\tr6, r2\n \tadds\tr2, #8\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadds\tr0, r0, r4\n+\tadds\tr0, r1, r4\n \tmovs\tr5, r1\n-\tands\tr6, r6\n+\tands\tr6, r7\n \tmovs\tr3, r1\n-\tadds\tr0, r7, r3\n+\tadds\tr0, r0, r4\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xf7a0000c\n-\t\t\t@ instruction: 0xf7aa000c\n-\tasrs\tr4, r3, #30\n+\t\t\t@ instruction: 0xf7a8000c\n+\t\t\t@ instruction: 0xf7b2000c\n+\tasrs\tr4, r4, #30\n \tmovs\tr5, r1\n-\tasrs\tr2, r3, #30\n+\tasrs\tr2, r4, #30\n \tmovs\tr5, r1\n-\tsubs\tr6, #158\t@ 0x9e\n+\tsubs\tr6, #166\t@ 0xa6\n \tmovs\tr3, r1\n-\tasrs\tr4, r3, #30\n-\tmovs\tr5, r1\n \tasrs\tr4, r4, #30\n \tmovs\tr5, r1\n \tasrs\tr4, r5, #30\n \tmovs\tr5, r1\n \tasrs\tr4, r6, #30\n \tmovs\tr5, r1\n-\tsubs\tr6, #60\t@ 0x3c\n+\tasrs\tr4, r7, #30\n+\tmovs\tr5, r1\n+\tsubs\tr6, #68\t@ 0x44\n \tmovs\tr3, r1\n-\tasrs\tr0, r7, #30\n+\tasrs\tr0, r0, #31\n \tmovs\tr5, r1\n-\tsubs\tr6, #24\n+\tsubs\tr6, #32\n \tmovs\tr3, r1\n \tcmp\tr7, #124\t@ 0x7c\n \tmovs\tr6, r2\n-\t\t\t@ instruction: 0xf5e8000c\n-\trsb\tr0, lr, #9175040\t@ 0x8c0000\n-\tsubs.w\tr0, r4, #9175040\t@ 0x8c0000\n-\t\t\t@ instruction: 0xf582000c\n-\t\t\t@ instruction: 0xf58c000c\n-\tsbcs.w\tr0, r2, #9175040\t@ 0x8c0000\n-\tsubs\tr5, #112\t@ 0x70\n+\t\t\t@ instruction: 0xf5f0000c\n+\trsbs\tr0, r6, #9175040\t@ 0x8c0000\n+\tsubs.w\tr0, ip, #9175040\t@ 0x8c0000\n+\t\t\t@ instruction: 0xf58a000c\n+\t\t\t@ instruction: 0xf594000c\n+\tsbcs.w\tr0, sl, #9175040\t@ 0x8c0000\n+\tsubs\tr5, #120\t@ 0x78\n \tmovs\tr3, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr0, r7, #21\n+\tasrs\tr0, r0, #22\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf396000c\n-\t\t\t@ instruction: 0xf3b6000c\n-\tusat16\tr0, #12, r8\n-\tb.n\t34aaa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acc74>\n+\t\t\t@ instruction: 0xf39e000c\n+\t\t\t@ instruction: 0xf3be000c\n+\t\t\t@ instruction: 0xf3b0000c\n+\tb.n\t34aab8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acc84>\n \tmovs\tr2, r1\n-\t\t\t@ instruction: 0xf3e4000c\n-\tb.n\t34aa50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acc1c>\n+\t\t\t@ instruction: 0xf3ec000c\n+\tb.n\t34aa60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acc2c>\n \tmovs\tr2, r1\n MIRAParameters::dumpAlignParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1978\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr4, [pc, #2268]\t@ 34abdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acda8>\n \tvpush\t{d8-d9}\n@@ -1707095,106 +1707095,106 @@\n \tb.n\t34ab12 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1accde>\n \tcmp\tr4, #84\t@ 0x54\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr4, #74\t@ 0x4a\n \tmovs\tr6, r2\n-\tasrs\tr2, r7, #16\n+\tasrs\tr2, r0, #17\n \tmovs\tr5, r1\n-\tasrs\tr4, r3, #17\n+\tasrs\tr4, r4, #17\n \tmovs\tr5, r1\n-\tsubs\tr2, #106\t@ 0x6a\n+\tsubs\tr2, #114\t@ 0x72\n \tmovs\tr3, r1\n-\tsubs\tr2, #82\t@ 0x52\n+\tsubs\tr2, #90\t@ 0x5a\n \tmovs\tr3, r1\n-\tasrs\tr4, r1, #17\n+\tasrs\tr4, r2, #17\n \tmovs\tr5, r1\n-\tsubs.w\tr0, r2, #12\n-\t\t\t@ instruction: 0xf198000c\n-\tasrs\tr4, r2, #11\n+\tsubs.w\tr0, sl, #12\n+\tsub.w\tr0, r0, #12\n+\tasrs\tr4, r3, #11\n \tmovs\tr5, r1\n-\tsubs\tr0, #174\t@ 0xae\n+\tsubs\tr0, #182\t@ 0xb6\n \tmovs\tr3, r1\n-\tasrs\tr6, r0, #11\n+\tasrs\tr6, r1, #11\n \tmovs\tr5, r1\n-\tsubs\tr0, #136\t@ 0x88\n+\tsubs\tr0, #144\t@ 0x90\n \tmovs\tr3, r1\n-\tasrs\tr4, r6, #10\n+\tasrs\tr4, r7, #10\n \tmovs\tr5, r1\n-\tsubs\tr0, #98\t@ 0x62\n+\tsubs\tr0, #106\t@ 0x6a\n \tmovs\tr3, r1\n-\tasrs\tr6, r4, #10\n+\tasrs\tr6, r5, #10\n \tmovs\tr5, r1\n-\tsubs\tr0, #60\t@ 0x3c\n+\tsubs\tr0, #68\t@ 0x44\n \tmovs\tr3, r1\n-\tasrs\tr0, r2, #10\n+\tasrs\tr0, r3, #10\n \tmovs\tr5, r1\n-\tsubs\tr0, #2\n+\tsubs\tr0, #10\n \tmovs\tr3, r1\n-\tasrs\tr4, r0, #10\n+\tasrs\tr4, r1, #10\n \tmovs\tr5, r1\n-\tlsls\tr6, r6, #10\n+\tlsls\tr6, r7, #10\n \tmovs\tr5, r1\n-\tasrs\tr0, r7, #9\n+\tasrs\tr0, r0, #10\n \tmovs\tr5, r1\n-\tlsls\tr6, r1, #10\n+\tlsls\tr6, r2, #10\n \tmovs\tr5, r1\n-\tasrs\tr0, r6, #9\n+\tasrs\tr0, r7, #9\n \tmovs\tr5, r1\n-\tadds\tr7, #136\t@ 0x88\n+\tadds\tr7, #144\t@ 0x90\n \tmovs\tr3, r1\n-\tlsls\tr2, r1, #9\n+\tlsls\tr2, r2, #9\n \tmovs\tr5, r1\n-\tasrs\tr4, r3, #9\n+\tasrs\tr4, r4, #9\n \tmovs\tr5, r1\n-\tvhadd.s8\td16, d6, d12\n-\tvhadd.s\td0, d4, d12\n-\tcdp\t0, 13, cr0, cr2, cr12, {0}\n-\tcdp\t0, 11, cr0, cr6, cr12, {0}\n-\tcdp\t0, 9, cr0, cr10, cr12, {0}\n-\tcdp\t0, 6, cr0, cr6, cr12, {0}\n+\tvhadd.s8\td16, d14, d12\n+\tvhadd.s\td0, d12, d12\n+\tcdp\t0, 13, cr0, cr10, cr12, {0}\n+\tcdp\t0, 11, cr0, cr14, cr12, {0}\n+\tcdp\t0, 10, cr0, cr2, cr12, {0}\n \tcdp\t0, 6, cr0, cr14, cr12, {0}\n-\tcdp\t0, 5, cr0, cr2, cr12, {0}\n-\tasrs\tr0, r7, #3\n+\tcdp\t0, 7, cr0, cr6, cr12, {0}\n+\tcdp\t0, 5, cr0, cr10, cr12, {0}\n+\tasrs\tr0, r0, #4\n \tmovs\tr5, r1\n-\tlsls\tr4, r6, #2\n+\tlsls\tr4, r7, #2\n \tmovs\tr5, r1\n-\tadds\tr5, #164\t@ 0xa4\n+\tadds\tr5, #172\t@ 0xac\n \tmovs\tr3, r1\n-\tasrs\tr0, r3, #3\n+\tasrs\tr0, r4, #3\n \tmovs\tr5, r1\n \tmovs\tr7, #6\n \tmovs\tr6, r2\n-\tldcl\t0, cr0, [lr, #-48]!\t@ 0xffffffd0\n-\tstcl\t0, cr0, [r4, #-48]!\t@ 0xffffffd0\n-\tstcl\t0, cr0, [sl, #-48]\t@ 0xffffffd0\n-\tldc\t0, cr0, [r0, #-48]!\t@ 0xffffffd0\n-\tldc\t0, cr0, [r6, #-48]\t@ 0xffffffd0\n-\tldcl\t0, cr0, [ip], #48\t@ 0x30\n-\tadds\tr4, #248\t@ 0xf8\n+\tstc\t0, cr0, [r6, #48]\t@ 0x30\n+\tstcl\t0, cr0, [ip, #-48]!\t@ 0xffffffd0\n+\tldcl\t0, cr0, [r2, #-48]\t@ 0xffffffd0\n+\tldc\t0, cr0, [r8, #-48]!\t@ 0xffffffd0\n+\tldc\t0, cr0, [lr, #-48]\t@ 0xffffffd0\n+\tstc\t0, cr0, [r4, #-48]\t@ 0xffffffd0\n+\tadds\tr5, #0\n \tmovs\tr3, r1\n-\tvhadd.u\td0, d10, d12\n+\tvhadd.u8\td16, d2, d12\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xeaac000c\n-\tpkhbt\tr0, sl, ip\n-\t\t\t@ instruction: 0xeabc000c\n-\tbge.n\t34ac94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ace60>\n+\t\t\t@ instruction: 0xeab4000c\n+\t\t\t@ instruction: 0xead2000c\n+\tpkhbt\tr0, r4, ip\n+\tbge.n\t34aca4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ace70>\n \tmovs\tr2, r1\n-\torr.w\tr0, r6, ip\n-\torn\tr0, r6, ip\n-\torrs.w\tr0, r8, ip\n-\tbge.n\t34abdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acda8>\n+\torr.w\tr0, lr, ip\n+\torn\tr0, lr, ip\n+\torn\tr0, r0, ip\n+\tbge.n\t34abec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acdb8>\n \tmovs\tr2, r1\n-\teors.w\tr0, sl, ip\n-\tbge.n\t34ad8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acf58>\n+\t\t\t@ instruction: 0xeaa2000c\n+\tbge.n\t34ad9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acf68>\n \tmovs\tr2, r1\n-\torn\tr0, r2, ip\n-\tbge.n\t34ad24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acef0>\n+\torn\tr0, sl, ip\n+\tbge.n\t34ad34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acf00>\n \tmovs\tr2, r1\n MIRAParameters::dumpHashStatisticsParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1203\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr.w\tr5, [pc, #1176]\t@ 34b174 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad340>\n \tvpush\t{d8}\n@@ -1707768,84 +1707768,84 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tmovs\tr2, #120\t@ 0x78\n \tmovs\tr6, r2\n \tmovs\tr2, #112\t@ 0x70\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr4, r0, #16\n-\tmovs\tr5, r1\n-\tlsrs\tr6, r3, #16\n+\tlsrs\tr4, r1, #16\n \tmovs\tr5, r1\n-\tlsrs\tr0, r5, #16\n+\tlsrs\tr6, r4, #16\n \tmovs\tr5, r1\n-\tlsrs\tr2, r6, #16\n+\tlsrs\tr0, r6, #16\n \tmovs\tr5, r1\n \tlsrs\tr2, r7, #16\n \tmovs\tr5, r1\n-\tlsrs\tr0, r0, #17\n+\tlsrs\tr2, r0, #17\n \tmovs\tr5, r1\n-\tlsrs\tr2, r2, #17\n+\tlsrs\tr0, r1, #17\n \tmovs\tr5, r1\n-\tlsrs\tr0, r3, #17\n+\tlsrs\tr2, r3, #17\n \tmovs\tr5, r1\n-\tadds\tr0, #20\n-\tmovs\tr3, r1\n-\tlsrs\tr4, r2, #17\n+\tlsrs\tr0, r4, #17\n \tmovs\tr5, r1\n+\tadds\tr0, #28\n+\tmovs\tr3, r1\n \tlsrs\tr4, r3, #17\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xfab0000c\n-\tlsrs\tr4, r3, #17\n+\tlsrs\tr4, r4, #17\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xe80a000c\n-\tldr\tr7, [sp, #224]\t@ 0xe0\n+\t\t\t@ instruction: 0xfab8000c\n+\tlsrs\tr4, r4, #17\n+\tmovs\tr5, r1\n+\t\t\t@ instruction: 0xe812000c\n+\tldr\tr7, [sp, #256]\t@ 0x100\n \tmovs\tr2, r1\n-\tb.n\t34b08c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad258>\n+\tb.n\t34b09c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad268>\n \tmovs\tr4, r1\n-\tlsrs\tr2, r7, #13\n+\tlsrs\tr2, r0, #14\n \tmovs\tr5, r1\n-\tlsrs\tr0, r7, #13\n+\tlsrs\tr0, r0, #14\n \tmovs\tr5, r1\n-\tlsrs\tr6, r6, #13\n+\tlsrs\tr6, r7, #13\n \tmovs\tr5, r1\n \tsubs\tr2, r6, #7\n \tmovs\tr6, r2\n-\tb.n\t34aec4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad090>\n+\tb.n\t34aed4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad0a0>\n \tmovs\tr4, r1\n-\tb.n\t34ae94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad060>\n+\tb.n\t34aea4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad070>\n \tmovs\tr4, r1\n-\tb.n\t34ae64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad030>\n+\tb.n\t34ae74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad040>\n \tmovs\tr4, r1\n-\tb.n\t34ae34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad000>\n+\tb.n\t34ae44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad010>\n \tmovs\tr4, r1\n-\tb.n\t34add4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acfa0>\n+\tb.n\t34ade4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acfb0>\n \tmovs\tr4, r1\n-\tb.n\t34adec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acfb8>\n+\tb.n\t34adfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acfc8>\n \tmovs\tr4, r1\n-\tb.n\t34adbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acf88>\n+\tb.n\t34adcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acf98>\n \tmovs\tr4, r1\n-\tldrh.w\tr0, [r4, #12]\n-\tb.n\t34ad54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acf20>\n+\tldrh.w\tr0, [ip, #12]\n+\tb.n\t34ad64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acf30>\n \tmovs\tr4, r1\n-\tb.n\t34ad10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acedc>\n+\tb.n\t34ad20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1aceec>\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tb.n\t34ab0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1accd8>\n+\tb.n\t34ab1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acce8>\n \tmovs\tr4, r1\n-\tb.n\t34ab50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acd1c>\n+\tb.n\t34ab60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acd2c>\n \tmovs\tr4, r1\n-\tb.n\t34ab38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acd04>\n+\tb.n\t34ab48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acd14>\n \tmovs\tr4, r1\n-\tbmi.n\t34b1a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad370>\n+\tbmi.n\t34b1b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad380>\n \tmovs\tr2, r1\n-\tb.n\t34abc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acd8c>\n+\tb.n\t34abd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1acd9c>\n \tmovs\tr4, r1\n-\tbmi.n\t34b154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad320>\n+\tbmi.n\t34b164 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad330>\n \tmovs\tr2, r1\n MIRAParameters::dumpFileTempParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:670\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr.w\tr5, [pc, #1396]\t@ 34b790 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ad95c>\n \tvpush\t{d8}\n@@ -1708514,115 +1708514,115 @@\n \tnop\n \tadds\tr0, r7, #4\n \tmovs\tr6, r2\n \tadds\tr0, r6, #4\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr4, r7, #1\n-\tmovs\tr5, r1\n \tlsrs\tr4, r0, #2\n \tmovs\tr5, r1\n-\tcmp\tr3, #80\t@ 0x50\n+\tlsrs\tr4, r1, #2\n+\tmovs\tr5, r1\n+\tcmp\tr3, #88\t@ 0x58\n \tmovs\tr3, r1\n-\tcmp\tr3, #54\t@ 0x36\n+\tcmp\tr3, #62\t@ 0x3e\n \tmovs\tr3, r1\n-\tlsrs\tr4, r0, #2\n+\tlsrs\tr4, r1, #2\n \tmovs\tr5, r1\n-\tb.n\t34be88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae054>\n+\tb.n\t34be98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae064>\n \tmovs\tr4, r1\n-\tldr\tr2, [sp, #608]\t@ 0x260\n+\tldr\tr2, [sp, #640]\t@ 0x280\n \tmovs\tr2, r1\n-\tb.n\t34bd34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adf00>\n+\tb.n\t34bd44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adf10>\n \tmovs\tr4, r1\n-\tlsls\tr6, r4, #30\n-\tmovs\tr5, r1\n-\tcmp\tr2, #26\n-\tmovs\tr3, r1\n-\tlsls\tr4, r5, #30\n+\tlsls\tr6, r5, #30\n \tmovs\tr5, r1\n-\tcmp\tr1, #244\t@ 0xf4\n+\tcmp\tr2, #34\t@ 0x22\n \tmovs\tr3, r1\n \tlsls\tr4, r6, #30\n \tmovs\tr5, r1\n-\tcmp\tr1, #208\t@ 0xd0\n+\tcmp\tr1, #252\t@ 0xfc\n \tmovs\tr3, r1\n-\tlsls\tr6, r7, #30\n+\tlsls\tr4, r7, #30\n \tmovs\tr5, r1\n-\tcmp\tr1, #174\t@ 0xae\n+\tcmp\tr1, #216\t@ 0xd8\n \tmovs\tr3, r1\n-\tlsls\tr4, r0, #31\n+\tlsls\tr6, r0, #31\n \tmovs\tr5, r1\n-\tcmp\tr1, #136\t@ 0x88\n+\tcmp\tr1, #182\t@ 0xb6\n \tmovs\tr3, r1\n \tlsls\tr4, r1, #31\n \tmovs\tr5, r1\n-\tcmp\tr1, #100\t@ 0x64\n+\tcmp\tr1, #144\t@ 0x90\n \tmovs\tr3, r1\n-\tlsls\tr4, r3, #31\n-\tmovs\tr5, r1\n-\tlsls\tr0, r6, #31\n+\tlsls\tr4, r2, #31\n \tmovs\tr5, r1\n-\tcmp\tr1, #52\t@ 0x34\n+\tcmp\tr1, #108\t@ 0x6c\n \tmovs\tr3, r1\n-\tlsls\tr2, r7, #31\n+\tlsls\tr4, r4, #31\n \tmovs\tr5, r1\n-\tcmp\tr1, #18\n+\tlsls\tr0, r7, #31\n+\tmovs\tr5, r1\n+\tcmp\tr1, #60\t@ 0x3c\n \tmovs\tr3, r1\n-\tlsrs\tr0, r0, #32\n+\tlsrs\tr2, r0, #32\n \tmovs\tr5, r1\n-\tcmp\tr0, #236\t@ 0xec\n+\tcmp\tr1, #26\n \tmovs\tr3, r1\n \tlsrs\tr0, r1, #32\n \tmovs\tr5, r1\n-\tcmp\tr0, #200\t@ 0xc8\n+\tcmp\tr0, #244\t@ 0xf4\n \tmovs\tr3, r1\n-\tlsrs\tr2, r2, #32\n+\tlsrs\tr0, r2, #32\n \tmovs\tr5, r1\n-\tcmp\tr0, #166\t@ 0xa6\n+\tcmp\tr0, #208\t@ 0xd0\n \tmovs\tr3, r1\n-\tcmp\tr0, #128\t@ 0x80\n+\tlsrs\tr2, r3, #32\n+\tmovs\tr5, r1\n+\tcmp\tr0, #174\t@ 0xae\n \tmovs\tr3, r1\n-\tlsrs\tr0, r2, #32\n+\tcmp\tr0, #136\t@ 0x88\n+\tmovs\tr3, r1\n+\tlsrs\tr0, r3, #32\n \tmovs\tr5, r1\n \tadds\tr6, r4, r7\n \tmovs\tr6, r2\n-\tb.n\t34b900 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adacc>\n+\tb.n\t34b910 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adadc>\n \tmovs\tr4, r1\n-\tb.n\t34b8d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ada9c>\n+\tb.n\t34b8e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adaac>\n \tmovs\tr4, r1\n-\tb.n\t34b8a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ada6c>\n+\tb.n\t34b8b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ada7c>\n \tmovs\tr4, r1\n-\tb.n\t34b870 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ada3c>\n+\tb.n\t34b880 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ada4c>\n \tmovs\tr4, r1\n-\tsvc\t236\t@ 0xec\n+\tsvc\t244\t@ 0xf4\n \tmovs\tr4, r1\n-\tsvc\t246\t@ 0xf6\n+\tsvc\t254\t@ 0xfe\n \tmovs\tr4, r1\n-\tsvc\t220\t@ 0xdc\n+\tsvc\t228\t@ 0xe4\n \tmovs\tr4, r1\n-\tmovs\tr7, #204\t@ 0xcc\n+\tmovs\tr7, #212\t@ 0xd4\n \tmovs\tr3, r1\n-\tsvc\t150\t@ 0x96\n+\tsvc\t158\t@ 0x9e\n \tmovs\tr4, r1\n-\tsvc\t114\t@ 0x72\n+\tsvc\t122\t@ 0x7a\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tudf\t#108\t@ 0x6c\n+\tudf\t#116\t@ 0x74\n \tmovs\tr4, r1\n-\tudf\t#140\t@ 0x8c\n+\tudf\t#148\t@ 0x94\n \tmovs\tr4, r1\n-\tudf\t#126\t@ 0x7e\n+\tudf\t#134\t@ 0x86\n \tmovs\tr4, r1\n-\tldmia\tr6!, {r1, r4, r5, r7}\n+\tldmia\tr6!, {r1, r3, r4, r5, r7}\n \tmovs\tr2, r1\n-\tudf\t#190\t@ 0xbe\n+\tudf\t#198\t@ 0xc6\n \tmovs\tr4, r1\n-\tldmia\tr6!, {r1, r2, r7}\n+\tldmia\tr6!, {r1, r2, r3, r7}\n \tmovs\tr2, r1\n MIRAParameters::dumpFileOutParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:746\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n \tldr.w\tr5, [pc, #1436]\t@ 34be0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adfd8>\n \tvpush\t{d8}\n@@ -1709287,115 +1709287,115 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tasrs\tr4, r4, #27\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr2, r3, #27\n \tmovs\tr6, r2\n-\tlsls\tr6, r2, #19\n+\tlsls\tr6, r3, #19\n \tmovs\tr5, r1\n-\tlsls\tr4, r4, #19\n+\tlsls\tr4, r5, #19\n \tmovs\tr5, r1\n-\tmovs\tr4, #252\t@ 0xfc\n+\tmovs\tr5, #4\n \tmovs\tr3, r1\n-\tlsls\tr6, r4, #19\n+\tlsls\tr6, r5, #19\n \tmovs\tr5, r1\n-\tmovs\tr4, #216\t@ 0xd8\n+\tmovs\tr4, #224\t@ 0xe0\n \tmovs\tr3, r1\n-\tlsls\tr0, r2, #19\n+\tlsls\tr0, r3, #19\n \tmovs\tr5, r1\n-\tmovs\tr4, #150\t@ 0x96\n+\tmovs\tr4, #158\t@ 0x9e\n \tmovs\tr3, r1\n-\tlsls\tr4, r0, #19\n+\tlsls\tr4, r1, #19\n \tmovs\tr5, r1\n-\tmovs\tr4, #110\t@ 0x6e\n+\tmovs\tr4, #118\t@ 0x76\n \tmovs\tr3, r1\n-\tlsls\tr2, r0, #19\n+\tlsls\tr2, r1, #19\n \tmovs\tr5, r1\n-\tlsls\tr4, r7, #18\n+\tlsls\tr4, r0, #19\n \tmovs\tr5, r1\n-\tmovs\tr4, #54\t@ 0x36\n+\tmovs\tr4, #62\t@ 0x3e\n \tmovs\tr3, r1\n-\tlsls\tr0, r0, #19\n+\tlsls\tr0, r1, #19\n \tmovs\tr5, r1\n-\tmovs\tr4, #14\n+\tmovs\tr4, #22\n \tmovs\tr3, r1\n-\tlsls\tr4, r0, #19\n+\tlsls\tr4, r1, #19\n \tmovs\tr5, r1\n-\tmovs\tr3, #230\t@ 0xe6\n+\tmovs\tr3, #238\t@ 0xee\n \tmovs\tr3, r1\n-\tlsls\tr6, r0, #19\n+\tlsls\tr6, r1, #19\n \tmovs\tr5, r1\n-\tmovs\tr3, #190\t@ 0xbe\n+\tmovs\tr3, #198\t@ 0xc6\n \tmovs\tr3, r1\n-\tmovs\tr3, #164\t@ 0xa4\n+\tmovs\tr3, #172\t@ 0xac\n \tmovs\tr3, r1\n-\tlsls\tr6, r0, #19\n+\tlsls\tr6, r1, #19\n \tmovs\tr5, r1\n-\tblt.n\t34be20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adfec>\n+\tblt.n\t34be30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adffc>\n \tmovs\tr4, r1\n-\tstr\tr3, [sp, #32]\n+\tstr\tr3, [sp, #64]\t@ 0x40\n \tmovs\tr2, r1\n-\tblt.n\t34bee0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0ac>\n+\tblt.n\t34bef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0bc>\n \tmovs\tr4, r1\n-\tlsls\tr0, r7, #15\n+\tlsls\tr0, r0, #16\n \tmovs\tr5, r1\n-\tmovs\tr2, #152\t@ 0x98\n+\tmovs\tr2, #160\t@ 0xa0\n \tmovs\tr3, r1\n-\tlsls\tr6, r7, #15\n+\tlsls\tr6, r0, #16\n \tmovs\tr5, r1\n-\tmovs\tr2, #114\t@ 0x72\n+\tmovs\tr2, #122\t@ 0x7a\n \tmovs\tr3, r1\n-\tlsls\tr6, r0, #16\n+\tlsls\tr6, r1, #16\n \tmovs\tr5, r1\n-\tmovs\tr2, #78\t@ 0x4e\n+\tmovs\tr2, #86\t@ 0x56\n \tmovs\tr3, r1\n-\tlsls\tr0, r2, #16\n+\tlsls\tr0, r3, #16\n \tmovs\tr5, r1\n-\tmovs\tr2, #44\t@ 0x2c\n+\tmovs\tr2, #52\t@ 0x34\n \tmovs\tr3, r1\n-\tmovs\tr2, #6\n+\tmovs\tr2, #14\n \tmovs\tr3, r1\n-\tlsls\tr6, r1, #16\n+\tlsls\tr6, r2, #16\n \tmovs\tr5, r1\n \tasrs\tr4, r5, #13\n \tmovs\tr6, r2\n-\tbls.n\t34be88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae054>\n+\tbls.n\t34be98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae064>\n \tmovs\tr4, r1\n-\tbls.n\t34be58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae024>\n+\tbls.n\t34be68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae034>\n \tmovs\tr4, r1\n-\tbls.n\t34be28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adff4>\n+\tbls.n\t34be38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae004>\n \tmovs\tr4, r1\n-\tbls.n\t34bdf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adfc4>\n+\tbls.n\t34be08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adfd4>\n \tmovs\tr4, r1\n-\tbls.n\t34bf98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae164>\n+\tbls.n\t34bfa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae174>\n \tmovs\tr4, r1\n-\tbls.n\t34bfb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae17c>\n+\tbls.n\t34bdc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1adf8c>\n \tmovs\tr4, r1\n-\tbls.n\t34bf80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae14c>\n+\tbls.n\t34bf90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae15c>\n \tmovs\tr4, r1\n-\tmovs\tr1, #82\t@ 0x52\n+\tmovs\tr1, #90\t@ 0x5a\n \tmovs\tr3, r1\n-\tbls.n\t34befc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0c8>\n+\tbls.n\t34bf0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0d8>\n \tmovs\tr4, r1\n-\tbhi.n\t34beb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae084>\n+\tbls.n\t34bec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae094>\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tbvc.n\t34beac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae078>\n+\tbvc.n\t34bebc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae088>\n \tmovs\tr4, r1\n-\tbhi.n\t34bef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0bc>\n+\tbhi.n\t34bf00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0cc>\n \tmovs\tr4, r1\n-\tbhi.n\t34bed8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0a4>\n+\tbhi.n\t34bee8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae0b4>\n \tmovs\tr4, r1\n-\tldmia\tr0!, {r2, r4, r5}\n+\tldmia\tr0!, {r2, r3, r4, r5}\n \tmovs\tr2, r1\n-\tbhi.n\t34bf60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae12c>\n+\tbhi.n\t34bf70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae13c>\n \tmovs\tr4, r1\n-\tldmia\tr0!, {r3}\n+\tldmia\tr0!, {r4}\n \tmovs\tr2, r1\n MIRAParameters::dumpSkimParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1121\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr4, [pc, #1492]\t@ 34c4c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae68c>\n \tvpush\t{d8}\n@@ -1710092,79 +1710092,79 @@\n \tnop\n \tasrs\tr0, r5, #1\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr4, r3, #1\n \tmovs\tr6, r2\n-\tlsls\tr0, r2, #3\n+\tlsls\tr0, r3, #3\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xf766000c\n-\tlsls\tr4, r7, #2\n+\t\t\t@ instruction: 0xf76e000c\n+\tlsls\tr4, r0, #3\n \tmovs\tr5, r1\n-\tsubs\tr2, r2, #1\n+\tsubs\tr2, r3, #1\n \tmovs\tr3, r1\n-\tlsls\tr2, r0, #3\n+\tlsls\tr2, r1, #3\n \tmovs\tr5, r1\n-\tlsls\tr4, r7, #2\n+\tlsls\tr4, r0, #3\n \tmovs\tr5, r1\n-\tlsls\tr4, r1, #3\n+\tlsls\tr4, r2, #3\n \tmovs\tr5, r1\n-\tlsls\tr0, r2, #3\n+\tlsls\tr0, r3, #3\n \tmovs\tr5, r1\n-\tadds\tr2, r4, #7\n+\tadds\tr2, r5, #7\n \tmovs\tr3, r1\n-\tlsls\tr4, r1, #3\n+\tlsls\tr4, r2, #3\n \tmovs\tr5, r1\n-\tbpl.n\t34c534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae700>\n+\tbpl.n\t34c544 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae710>\n \tmovs\tr4, r1\n-\tbpl.n\t34c518 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae6e4>\n+\tbpl.n\t34c528 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae6f4>\n \tmovs\tr4, r1\n-\tvhadd.u32\td0, d4, d12\n-\tvhadd.u16\td0, d6, d12\n-\tsubs\tr6, r4, r7\n+\tvhadd.u32\td0, d12, d12\n+\tvhadd.u16\td0, d14, d12\n+\tsubs\tr6, r5, r7\n \tmovs\tr3, r1\n-\tvhadd.u8\td0, d14, d12\n-\tvhadd.u8\td0, d12, d12\n-\tb.n\t34c22c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae3f8>\n+\tvhadd.u16\td0, d6, d12\n+\tvhadd.u16\td0, d4, d12\n+\tb.n\t34c23c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae408>\n \tmovs\tr4, r1\n-\tcdp2\t0, 15, cr0, cr8, cr12, {0}\n-\tsubs\tr0, r0, r6\n+\tvhadd.u8\td0, d0, d12\n+\tsubs\tr0, r1, r6\n \tmovs\tr3, r1\n-\tcdp2\t0, 14, cr0, cr4, cr12, {0}\n \tcdp2\t0, 14, cr0, cr12, cr12, {0}\n+\tcdp2\t0, 15, cr0, cr4, cr12, {0}\n \tlsrs\tr4, r5, #18\n \tmovs\tr6, r2\n-\tbcc.n\t34c55c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae728>\n+\tbcc.n\t34c56c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae738>\n \tmovs\tr4, r1\n-\tbcs.n\t34c52c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae6f8>\n+\tbcc.n\t34c53c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae708>\n \tmovs\tr4, r1\n-\tbcs.n\t34c4fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae6c8>\n+\tbcs.n\t34c50c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae6d8>\n \tmovs\tr4, r1\n-\tbcs.n\t34c49c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae668>\n+\tbcs.n\t34c4ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae678>\n \tmovs\tr4, r1\n-\tbcs.n\t34c4b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae680>\n+\tbcs.n\t34c4c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae690>\n \tmovs\tr4, r1\n-\tbcs.n\t34c484 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae650>\n+\tbcs.n\t34c494 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae660>\n \tmovs\tr4, r1\n-\tsubs\tr0, r4, r2\n+\tsubs\tr0, r5, r2\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tbne.n\t34c5d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae79c>\n+\tbne.n\t34c5e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae7ac>\n \tmovs\tr4, r1\n-\tbne.n\t34c60c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae7d8>\n+\tbne.n\t34c61c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae7e8>\n \tmovs\tr4, r1\n-\tbne.n\t34c5f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae7c0>\n+\tbne.n\t34c604 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae7d0>\n \tmovs\tr4, r1\n-\tstmia\tr1!, {r2, r7}\n+\tstmia\tr1!, {r2, r3, r7}\n \tmovs\tr2, r1\n-\tbne.n\t34c47c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae648>\n+\tbne.n\t34c48c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ae658>\n \tmovs\tr4, r1\n-\tstmia\tr1!, {r1, r2, r4, r6}\n+\tstmia\tr1!, {r1, r2, r3, r4, r6}\n \tmovs\tr2, r1\n MIRAParameters::dumpContigParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:942\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr4, [pc, #2544]\t@ 34cf58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1af124>\n \tvpush\t{d8-d9}\n@@ -1711289,131 +1711289,131 @@\n \tb.n\t34ce8a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1af056>\n \tlsrs\tr4, r5, #7\n \tmovs\tr6, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr2, r4, #7\n \tmovs\tr6, r2\n-\tumlal\tr0, r0, lr, ip\n-\tadds\tr0, r2, r0\n+\t\t\t@ instruction: 0xfbf6000c\n+\tadds\tr0, r3, r0\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xfbf2000c\n-\tldmia\tr7!, {r2, r3, r5, r6}\n+\t\t\t@ instruction: 0xfbfa000c\n+\tldmia\tr7!, {r2, r4, r5, r6}\n \tmovs\tr4, r1\n-\tldmia\tr7!, {r4, r5, r6}\n+\tldmia\tr7!, {r3, r4, r5, r6}\n \tmovs\tr4, r1\n-\tasrs\tr4, r0, #26\n+\tasrs\tr4, r1, #26\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xfa7a000c\n-\tldmia\tr6, {r1, r2, r5, r6}\n-\tmovs\tr4, r1\n-\tldmia\tr6, {r2, r4, r6}\n+\t\t\t@ instruction: 0xfa82000c\n+\tldmia\tr6, {r1, r2, r3, r5, r6}\n \tmovs\tr4, r1\n-\tldmia\tr5, {r1, r2, r3, r5, r6, r7}\n+\tldmia\tr6, {r2, r3, r4, r6}\n \tmovs\tr4, r1\n-\tldmia\tr5!, {r1, r4, r6, r7}\n+\tldmia\tr5, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr4, r1\n-\tldmia\tr5, {r1, r2, r4, r5, r7}\n+\tldmia\tr5!, {r1, r3, r4, r6, r7}\n \tmovs\tr4, r1\n-\tldmia\tr5!, {r1, r7}\n+\tldmia\tr5, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr4, r1\n \tldmia\tr5!, {r1, r3, r7}\n \tmovs\tr4, r1\n-\tldmia\tr5, {r1, r2, r3, r5, r6}\n+\tldmia\tr5!, {r1, r4, r7}\n \tmovs\tr4, r1\n-\tldrsh.w\tr0, [ip, ip]\n-\tasrs\tr2, r7, #19\n+\tldmia\tr5, {r1, r2, r4, r5, r6}\n+\tmovs\tr4, r1\n+\tvst4.8\t{d16-d19}, [r4], ip\n+\tasrs\tr2, r0, #20\n \tmovs\tr3, r1\n-\tldrsh.w\tr0, [r8, ip]\n-\tasrs\tr2, r2, #19\n+\tvst4.8\t{d16-d19}, [r0], ip\n+\tasrs\tr2, r3, #19\n \tmovs\tr3, r1\n-\tvld4.8\t{d0-d3}, [r4], ip\n-\tsvc\t130\t@ 0x82\n-\tmovs\tr4, r1\n-\tldrsb.w\tr0, [r2, ip]\n-\tsvc\t88\t@ 0x58\n+\tvld4.8\t{d0-d3}, [ip], ip\n+\tsvc\t138\t@ 0x8a\n \tmovs\tr4, r1\n-\tldrsb.w\tr0, [r0, ip]\n-\tsvc\t48\t@ 0x30\n+\tldrsb.w\tr0, [sl, ip]\n+\tsvc\t96\t@ 0x60\n \tmovs\tr4, r1\n-\tvld4.8\t{d0-d3}, [r0], ip\n-\tldrsh.w\tr0, [r6, ip]\n-\tldr??.w\tr0, [r2, ip]\n-\tudf\t#210\t@ 0xd2\n+\tldrsb.w\tr0, [r8, ip]\n+\tsvc\t56\t@ 0x38\n \tmovs\tr4, r1\n-\tvst4.8\t{d16-d19}, [sl], ip\n-\tudf\t#168\t@ 0xa8\n+\tvld4.8\t{d0-d3}, [r8], ip\n+\tldrsh.w\tr0, [lr, ip]\n+\tldr??.w\tr0, [sl, ip]\n+\tudf\t#218\t@ 0xda\n \tmovs\tr4, r1\n \tldr??.w\tr0, [r2, ip]\n-\tldr??.w\tr0, [r6, ip]\n-\tldr??.w\tr0, [lr, ip]\n-\tudf\t#86\t@ 0x56\n+\tudf\t#176\t@ 0xb0\n \tmovs\tr4, r1\n-\tldr??.w\tr0, [r4, ip]\n-\tvld4.8\t{d0-d3}, [r8], ip\n+\tldr??.w\tr0, [sl, ip]\n \tldr??.w\tr0, [lr, ip]\n-\tldr??.w\tr0, [lr, #12]\n-\tvld4.8\t{d16-d19}, [sl], ip\n-\tasrs\tr2, r0, #12\n+\tvld4.8\t{d16-d19}, [r6], ip\n+\tudf\t#94\t@ 0x5e\n+\tmovs\tr4, r1\n+\tldr??.w\tr0, [ip, ip]\n+\tldrsh.w\tr0, [r0, ip]\n+\tvld4.8\t{d16-d19}, [r6], ip\n+\tvst4.8\t{d0-d3}, [r6], ip\n+\tldr??.w\tr0, [r2, ip]\n+\tasrs\tr2, r1, #12\n \tmovs\tr3, r1\n-\tvld4.8\t{d16-d19}, [r8], ip\n-\tasrs\tr4, r3, #11\n+\tldr??.w\tr0, [r0, ip]\n+\tasrs\tr4, r4, #11\n \tmovs\tr3, r1\n-\tldr??.w\tr0, [r6, ip]\n-\tble.n\t34cf34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1af100>\n+\tldr??.w\tr0, [lr, ip]\n+\tble.n\t34cf44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1af110>\n \tmovs\tr4, r1\n-\tvst4.8\t{d16-d19}, [r2], ip\n-\tble.n\t34d0ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1af2b8>\n+\tvst4.8\t{d16-d19}, [sl], ip\n+\tble.n\t34d0fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1af2c8>\n \tmovs\tr4, r1\n-\tldrsh.w\tr0, [r4, ip]\n-\tasrs\tr6, r3, #9\n+\tldrsh.w\tr0, [ip, ip]\n+\tasrs\tr6, r4, #9\n \tmovs\tr3, r1\n \tlsls\tr2, r1, #15\n \tmovs\tr6, r2\n-\tldmia\tr2!, {r1, r6}\n+\tldmia\tr2!, {r1, r3, r6}\n \tmovs\tr4, r1\n-\tldmia\tr2, {r1, r2, r5}\n+\tldmia\tr2, {r1, r2, r3, r5}\n \tmovs\tr4, r1\n-\tldmia\tr2!, {r1, r3}\n+\tldmia\tr2!, {r1, r4}\n \tmovs\tr4, r1\n-\tldmia\tr1, {r1, r2, r3, r5, r6, r7}\n+\tldmia\tr1, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr4, r1\n-\tldmia\tr1, {r1, r4, r6, r7}\n+\tldmia\tr1, {r1, r3, r4, r6, r7}\n \tmovs\tr4, r1\n-\tldmia\tr1, {r1, r2, r4, r5, r7}\n+\tldmia\tr1, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr4, r1\n-\tasrs\tr0, r6, #6\n+\tasrs\tr0, r7, #6\n \tmovs\tr3, r1\n-\tasrs\tr0, r7, #3\n+\tasrs\tr0, r0, #4\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstmia\tr7!, {r1, r4, r5}\n+\tstmia\tr7!, {r1, r3, r4, r5}\n \tmovs\tr4, r1\n-\tstmia\tr7!, {r1, r4, r6}\n+\tstmia\tr7!, {r1, r3, r4, r6}\n \tmovs\tr4, r1\n-\tstmia\tr7!, {r2, r6}\n+\tstmia\tr7!, {r2, r3, r6}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb778\n+\t\t\t@ instruction: 0xb780\n \tmovs\tr2, r1\n-\tstmia\tr6!, {r2, r3, r6, r7}\n+\tstmia\tr6!, {r2, r4, r6, r7}\n \tmovs\tr4, r1\n-\tstmia\tr6!, {r1, r3, r5, r6, r7}\n+\tstmia\tr6!, {r1, r4, r5, r6, r7}\n \tmovs\tr4, r1\n-\tstmia\tr6!, {r2, r3, r4, r6, r7}\n+\tstmia\tr6!, {r2, r5, r6, r7}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb710\n+\t\t\t@ instruction: 0xb718\n \tmovs\tr2, r1\n-\tstmia\tr7!, {r1, r2, r3, r4}\n+\tstmia\tr7!, {r1, r2, r5}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb6e4\n+\t\t\t@ instruction: 0xb6ec\n \tmovs\tr2, r1\n-\tstmia\tr6!, {r1, r2, r5, r6, r7}\n+\tstmia\tr6!, {r1, r2, r3, r5, r6, r7}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb6ac\n+\t\t\t@ instruction: 0xb6b4\n \tmovs\tr2, r1\n MIRAParameters::dumpAssemblyParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1659\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #2684]\t@ 34db04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afcd0>\n \tvpush\t{d8-d9}\n \tsub\tsp, #68\t@ 0x44\n@@ -1712589,130 +1712589,130 @@\n \tblx\tb694 >& std::operator<< >(std::basic_ostream >&, char const*)@plt+0x4>\n \tb.n\t34da3a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afc06>\n \tnop\n \tmcr2\t0, 6, r0, cr14, cr5, {0}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmcr2\t0, 6, r0, cr4, cr5, {0}\n-\t\t\t@ instruction: 0xf3e6000c\n-\t\t\t@ instruction: 0xf3ea000c\n-\tlsrs\tr6, r3, #19\n+\t\t\t@ instruction: 0xf3ee000c\n+\t\t\t@ instruction: 0xf3f2000c\n+\tlsrs\tr6, r4, #19\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xf3d2000c\n-\tlsrs\tr0, r3, #18\n+\t\t\t@ instruction: 0xf3da000c\n+\tlsrs\tr0, r4, #18\n \tmovs\tr3, r1\n-\tubfx\tr0, sl, #0, #13\n-\tstmia\tr4!, {}\n+\t\t\t@ instruction: 0xf3d2000c\n+\tstmia\tr4!, {r3}\n \tmovs\tr4, r1\n-\tstmia\tr3!, {r1, r2, r3, r5, r6, r7}\n+\tstmia\tr3!, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xf25c000c\n+\t\t\t@ instruction: 0xf264000c\n+\t\t\t@ instruction: 0xf276000c\n+\t\t\t@ instruction: 0xf26a000c\n \t\t\t@ instruction: 0xf26e000c\n-\t\t\t@ instruction: 0xf262000c\n-\t\t\t@ instruction: 0xf266000c\n-\t\t\t@ instruction: 0xf266000c\n-\tlsrs\tr0, r1, #10\n+\t\t\t@ instruction: 0xf26e000c\n+\tlsrs\tr0, r2, #10\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xf252000c\n-\tlsrs\tr4, r1, #9\n+\t\t\t@ instruction: 0xf25a000c\n+\tlsrs\tr4, r2, #9\n \tmovs\tr3, r1\n-\tmovw\tr0, #57356\t@ 0xe00c\n-\tbpl.n\t34db5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afd28>\n+\t\t\t@ instruction: 0xf256000c\n+\tbpl.n\t34db6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afd38>\n \tmovs\tr4, r1\n-\tmovw\tr0, #8204\t@ 0x200c\n-\tbmi.n\t34db10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afcdc>\n+\tmovw\tr0, #40972\t@ 0xa00c\n+\tbmi.n\t34db20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afcec>\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xf22e000c\n-\tbmi.n\t34dac0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afc8c>\n+\t\t\t@ instruction: 0xf236000c\n+\tbmi.n\t34dad0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afc9c>\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xf21c000c\n-\tbmi.n\t34da74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afc40>\n+\t\t\t@ instruction: 0xf224000c\n+\tbmi.n\t34da84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afc50>\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xf222000c\n-\t\t\t@ instruction: 0xf21c000c\n-\tstmia\tr1!, {r2, r5, r6}\n+\t\t\t@ instruction: 0xf22a000c\n+\t\t\t@ instruction: 0xf224000c\n+\tstmia\tr1!, {r2, r3, r5, r6}\n \tmovs\tr4, r1\n-\tstmia\tr1!, {r1, r4, r6}\n-\tmovs\tr4, r1\n-\tstmia\tr0!, {r2, r3, r5, r6, r7}\n+\tstmia\tr1!, {r1, r3, r4, r6}\n \tmovs\tr4, r1\n-\tstmia\tr0!, {r4, r6, r7}\n+\tstmia\tr0!, {r2, r4, r5, r6, r7}\n \tmovs\tr4, r1\n-\tstmia\tr0!, {r2, r4, r5, r7}\n+\tstmia\tr0!, {r3, r4, r6, r7}\n \tmovs\tr4, r1\n-\tstmia\tr0!, {r7}\n+\tstmia\tr0!, {r2, r3, r4, r5, r7}\n \tmovs\tr4, r1\n \tstmia\tr0!, {r3, r7}\n \tmovs\tr4, r1\n-\tstmia\tr0!, {r2, r3, r5, r6}\n+\tstmia\tr0!, {r4, r7}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xf0b2000c\n-\teor.w\tr0, lr, #12\n-\teors.w\tr0, ip, #12\n-\tlsls\tr0, r1, #31\n+\tstmia\tr0!, {r2, r4, r5, r6}\n+\tmovs\tr4, r1\n+\t\t\t@ instruction: 0xf0ba000c\n+\teors.w\tr0, r6, #12\n+\t\t\t@ instruction: 0xf0a4000c\n+\tlsls\tr0, r2, #31\n \tmovs\tr3, r1\n-\teor.w\tr0, r8, #12\n-\tbcs.n\t34dca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe6c>\n+\teors.w\tr0, r0, #12\n+\tbcs.n\t34dab0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afc7c>\n \tmovs\tr4, r1\n-\torn\tr0, r4, #12\n-\tlsls\tr0, r4, #29\n+\torn\tr0, ip, #12\n+\tlsls\tr0, r5, #29\n \tmovs\tr3, r1\n-\torn\tr0, r2, #12\n-\tbcs.n\t34dbec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afdb8>\n+\torn\tr0, sl, #12\n+\tbcs.n\t34dbfc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afdc8>\n \tmovs\tr4, r1\n-\torrs.w\tr0, r4, #12\n-\tlsls\tr0, r2, #28\n+\torrs.w\tr0, ip, #12\n+\tlsls\tr0, r3, #28\n \tmovs\tr3, r1\n-\torr.w\tr0, ip, #12\n-\tlsls\tr0, r5, #27\n+\torrs.w\tr0, r4, #12\n+\tlsls\tr0, r6, #27\n \tmovs\tr3, r1\n-\tbne.n\t34db18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afce4>\n+\tbne.n\t34db28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afcf4>\n \tmovs\tr4, r1\n-\torr.w\tr0, r6, #12\n+\torr.w\tr0, lr, #12\n \tstrh.w\tr0, [r4, r5, lsl #1]\n-\tbkpt\t0x009c\n+\tbkpt\t0x00a4\n \tmovs\tr4, r1\n-\tbkpt\t0x0080\n+\tbkpt\t0x0088\n \tmovs\tr4, r1\n-\tbkpt\t0x0064\n+\tbkpt\t0x006c\n \tmovs\tr4, r1\n-\tbkpt\t0x0048\n+\tbkpt\t0x0050\n \tmovs\tr4, r1\n-\tbkpt\t0x002c\n+\tbkpt\t0x0034\n \tmovs\tr4, r1\n-\tbkpt\t0x0010\n+\tbkpt\t0x0018\n \tmovs\tr4, r1\n-\tlsls\tr2, r1, #24\n+\tlsls\tr2, r2, #24\n \tmovs\tr3, r1\n-\tldcl\t0, cr0, [r6, #48]!\t@ 0x30\n+\tldcl\t0, cr0, [lr, #48]!\t@ 0x30\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcbnz\tr2, 34dc64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe30>\n+\tcbnz\tr2, 34dc66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe32>\n \tmovs\tr4, r1\n-\tcbnz\tr2, 34dc70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe3c>\n+\tcbnz\tr2, 34dc72 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe3e>\n \tmovs\tr4, r1\n-\tcbnz\tr4, 34dc70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe3c>\n+\tcbnz\tr4, 34dc72 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe3e>\n \tmovs\tr4, r1\n-\tadd\tr3, sp, #800\t@ 0x320\n+\tadd\tr3, sp, #832\t@ 0x340\n \tmovs\tr2, r1\n-\tcbnz\tr4, 34dc5a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe26>\n+\tcbnz\tr4, 34dc5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe28>\n \tmovs\tr4, r1\n-\tcbnz\tr4, 34dc66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe32>\n+\tcbnz\tr4, 34dc68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe34>\n \tmovs\tr4, r1\n-\tcbnz\tr6, 34dc66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe32>\n+\tcbnz\tr6, 34dc68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe34>\n \tmovs\tr4, r1\n-\tadd\tr3, sp, #392\t@ 0x188\n+\tadd\tr3, sp, #424\t@ 0x1a8\n \tmovs\tr2, r1\n-\tcbnz\tr0, 34dc80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe4c>\n+\tcbnz\tr0, 34dc82 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe4e>\n \tmovs\tr4, r1\n-\tadd\tr3, sp, #224\t@ 0xe0\n+\tadd\tr3, sp, #256\t@ 0x100\n \tmovs\tr2, r1\n-\tcbnz\tr2, 34dc7a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe46>\n+\tcbnz\tr2, 34dc7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1afe48>\n \tmovs\tr4, r1\n-\tadd\tr3, sp, #8\n+\tadd\tr3, sp, #40\t@ 0x28\n \tmovs\tr2, r1\n MIRAParameters::dumpPathfinderParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:1076\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r1\n \tldr.w\tr4, [pc, #1800]\t@ 34e340 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b050c>\n \tvpush\t{d8}\n@@ -1713520,90 +1713520,90 @@\n \tadd\tr1, pc\n \tblx\tb694 >& std::operator<< >(std::basic_ostream >&, char const*)@plt+0x4>\n \tb.n\t34e278 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0444>\n \t\t\t@ instruction: 0xf31c0015\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf3120015\n-\t\t\t@ instruction: 0xeaf2000c\n-\t\t\t@ instruction: 0xeaf8000c\n-\tlsls\tr4, r6, #4\n+\t\t\t@ instruction: 0xeafa000c\n+\tadd.w\tr0, r0, ip\n+\tlsls\tr4, r7, #4\n \tmovs\tr3, r1\n-\tldmia\tr3!, {r1, r2, r4, r5, r6, r7}\n-\tmovs\tr4, r1\n-\t\t\t@ instruction: 0xeae4000c\n-\t\t\t@ instruction: 0xb8f2\n+\tldmia\tr3, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb8e0\n+\t\t\t@ instruction: 0xeaec000c\n+\t\t\t@ instruction: 0xb8fa\n \tmovs\tr4, r1\n-\tldrd\tr0, r0, [r2, #48]!\t@ 0x30\n-\tldrd\tr0, r0, [r6, #48]!\t@ 0x30\n-\tldmia\tr2, {r1, r2, r4, r5, r7}\n+\t\t\t@ instruction: 0xb8e8\n \tmovs\tr4, r1\n-\tldrd\tr0, r0, [r2, #48]!\t@ 0x30\n-\tldrd\tr0, r0, [r8, #48]!\t@ 0x30\n-\tvaddl.u16\tq0, d0, d10\n-\tand.w\tr0, r2, ip\n-\t\t\t@ instruction: 0xb768\n+\tldrd\tr0, r0, [sl, #48]!\t@ 0x30\n+\tldrd\tr0, r0, [lr, #48]!\t@ 0x30\n+\tldmia\tr2, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb756\n+\tldrd\tr0, r0, [sl, #48]!\t@ 0x30\n+\tand.w\tr0, r0, ip\n+\tvaddl.u16\tq0, d8, d10\n+\tand.w\tr0, sl, ip\n+\t\t\t@ instruction: 0xb770\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb6f8\n+\t\t\t@ instruction: 0xb75e\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb6dc\n+\t\t\t@ instruction: 0xb700\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb6c0\n+\t\t\t@ instruction: 0xb6e4\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb68c\n+\t\t\t@ instruction: 0xb6c8\n \tmovs\tr4, r1\n \t\t\t@ instruction: 0xb694\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb678\n+\t\t\t@ instruction: 0xb69c\n+\tmovs\tr4, r1\n+\t\t\t@ instruction: 0xb680\n \tmovs\tr4, r1\n \tvshr.s16\td0, d5, #10\n-\tsetpan\t#0\n+\tsetpan\t#1\n \tmovs\tr4, r1\n-\tpush\t{r1, r2, r4, r5, r6, r7, lr}\n+\tpush\t{r1, r2, r3, r4, r5, r6, r7, lr}\n \tmovs\tr4, r1\n-\tpush\t{r2, r3, r4, r6, r7, lr}\n+\tpush\t{r2, r5, r6, r7, lr}\n \tmovs\tr4, r1\n-\tpush\t{r1, r6, r7, lr}\n+\tpush\t{r1, r3, r6, r7, lr}\n \tmovs\tr4, r1\n-\tpush\t{r3, r5, r7, lr}\n+\tpush\t{r4, r5, r7, lr}\n \tmovs\tr4, r1\n-\tpush\t{r1, r2, r3, r7, lr}\n+\tpush\t{r1, r2, r4, r7, lr}\n \tmovs\tr4, r1\n-\tldmia\tr0!, {r1, r2, r5, r6}\n+\tldmia\tr0!, {r1, r2, r3, r5, r6}\n \tmovs\tr4, r1\n-\tstc2l\t0, cr0, [r2], #40\t@ 0x28\n+\tstc2l\t0, cr0, [sl], #40\t@ 0x28\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcbz\tr4, 34e420 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05ec>\n+\tcbz\tr4, 34e422 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05ee>\n \tmovs\tr4, r1\n-\tcbz\tr4, 34e42c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05f8>\n+\tcbz\tr4, 34e42e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05fa>\n \tmovs\tr4, r1\n-\tcbz\tr6, 34e42c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05f8>\n+\tcbz\tr6, 34e42e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05fa>\n \tmovs\tr4, r1\n-\tadd\tr3, pc, #552\t@ (adr r3, 34e604 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b07d0>)\n+\tadd\tr3, pc, #584\t@ (adr r3, 34e624 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b07f0>)\n \tmovs\tr2, r1\n-\tuxtb\tr4, r4\n+\tuxtb\tr4, r5\n \tmovs\tr4, r1\n-\tcbz\tr0, 34e424 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05f0>\n+\tcbz\tr0, 34e426 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05f2>\n \tmovs\tr4, r1\n-\tuxtb\tr2, r6\n+\tuxtb\tr2, r7\n \tmovs\tr4, r1\n-\tadd\tr3, pc, #152\t@ (adr r3, 34e484 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0650>)\n+\tadd\tr3, pc, #184\t@ (adr r3, 34e4a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0670>)\n \tmovs\tr2, r1\n-\tcbz\tr4, 34e43c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0608>\n+\tcbz\tr4, 34e43e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b060a>\n \tmovs\tr4, r1\n-\tadd\tr2, pc, #1000\t@ (adr r2, 34e7dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b09a8>)\n+\tadd\tr3, pc, #8\t@ (adr r3, 34e3fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b05c8>)\n \tmovs\tr2, r1\n-\tuxtb\tr4, r7\n+\tcbz\tr4, 34e438 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0604>\n \tmovs\tr4, r1\n-\tadd\tr2, pc, #784\t@ (adr r2, 34e70c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b08d8>)\n+\tadd\tr2, pc, #816\t@ (adr r2, 34e72c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b08f8>)\n \tmovs\tr2, r1\n MIRAParameters::dumpAllParams(std::vector >&, std::vector > const&, std::ostream&):\n ./src/mira/parameters.C:552\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r1\n \tldr\tr1, [pc, #516]\t@ (34e608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b07d4>)\n \tldr\tr3, [pc, #516]\t@ (34e60c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b07d8>)\n@@ -1713878,28 +1713878,28 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t34e5ea , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b07b6>\n \tadcs.w\tr0, r8, r5, lsr #32\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadc.w\tr0, lr, r5, lsr #32\n-\tb.n\t34dff0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b01bc>\n+\tb.n\t34e000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b01cc>\n \tmovs\tr4, r1\n-\tb.n\t34e17c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0348>\n+\tb.n\t34e18c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0358>\n \tmovs\tr4, r1\n-\tldr\tr6, [r2, #104]\t@ 0x68\n+\tldr\tr6, [r3, #104]\t@ 0x68\n \tmovs\tr2, r1\n-\tb.n\t34e014 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b01e0>\n+\tb.n\t34e024 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b01f0>\n \tmovs\tr4, r1\n \tand.w\tr0, r8, r5, lsr #32\n-\tb.n\t34de98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0064>\n+\tb.n\t34dea8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0074>\n \tmovs\tr4, r1\n-\tb.n\t34ec1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0de8>\n+\tb.n\t34ec2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0df8>\n \tmovs\tr4, r1\n-\tb.n\t34ec04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0dd0>\n+\tb.n\t34ec14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0de0>\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n MIRAParameters::dumpAllParams(std::vector >&, std::ostream&):\n ./src/mira/parameters.C:526\n@@ -1714292,17 +1714292,17 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tstmdb\tr0!, {r0, r2, r4}\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmdb\tr6, {r0, r2, r4}\n \tstrd\tr0, r0, [r8], #-84\t@ 0x54\n-\tpop\t{r1, r3, r5, pc}\n+\tpop\t{r1, r4, r5, pc}\n \tmovs\tr4, r1\n-\tb.n\t34ec30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0dfc>\n+\tb.n\t34ec40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b0e0c>\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n operator<<(std::ostream&, MIRAParameters const&):\n ./src/mira/parameters.C:2226\n@@ -1715402,23 +1715402,23 @@\n \tmovs\tr0, r3\n \tb.n\t34f858 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b1a24>\n \tmovs\tr5, r2\n \torrs\tr2, r0\n \tmovs\tr0, r3\n \tcmn\tr4, r0\n \tmovs\tr0, r3\n-\tbgt.n\t34f1d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b139c>\n+\tbgt.n\t34efe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b11ac>\n \tmovs\tr4, r1\n-\tldr\tr0, [sp, #96]\t@ 0x60\n+\tldr\tr0, [sp, #128]\t@ 0x80\n \tmovs\tr2, r1\n-\tstr\tr3, [sp, #280]\t@ 0x118\n+\tstr\tr3, [sp, #312]\t@ 0x138\n \tmovs\tr4, r1\n-\tldr\tr4, [sp, #128]\t@ 0x80\n+\tldr\tr4, [sp, #160]\t@ 0xa0\n \tmovs\tr4, r1\n-\tldr\tr4, [sp, #280]\t@ 0x118\n+\tldr\tr4, [sp, #312]\t@ 0x138\n \tmovs\tr4, r1\n /usr/include/c++/10/bits/basic_string.h:814\n \tldrd\tsl, r4, [fp]\n \tadd\tr4, sl\n /usr/include/c++/10/bits/stl_iterator.h:1197\n \tsub.w\tr1, r8, sl\n /usr/include/c++/10/bits/basic_string.h:1849\n@@ -1716327,34 +1716327,34 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #11\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbhi.n\t34f76c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b1938>\n+\tbhi.n\t34f77c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b1948>\n \tmovs\tr4, r1\n \tblt.n\t34f790 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b195c>\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr0, [r3, #76]\t@ 0x4c\n+\tldr\tr0, [r4, #76]\t@ 0x4c\n \tmovs\tr4, r1\n \tsubs\tr2, #100\t@ 0x64\n \tmovs\tr0, r3\n \tlsrs\tr4, r6, #32\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xeb360015\n-\tstr\tr4, [sp, #264]\t@ 0x108\n+\tstr\tr4, [sp, #296]\t@ 0x128\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #240]\t@ 0xf0\n+\tstr\tr5, [sp, #272]\t@ 0x110\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #392]\t@ 0x188\n+\tstr\tr5, [sp, #424]\t@ 0x1a8\n \tmovs\tr4, r1\n-\tbpl.n\t34f814 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b19e0>\n+\tbpl.n\t34f824 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b19f0>\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tsubs\tr1, #60\t@ 0x3c\n \tmovs\tr0, r3\n@@ -1717592,19 +1717592,19 @@\n \tmovs\tr0, r0\n \tadds\tr3, #114\t@ 0x72\n \tmovs\tr0, r3\n \tadds\tr2, #164\t@ 0xa4\n \tmovs\tr0, r3\n \tadds\tr2, #150\t@ 0x96\n \tmovs\tr0, r3\n-\tsvc\t214\t@ 0xd6\n+\tsvc\t222\t@ 0xde\n \tmovs\tr2, r1\n \tldrsh\tr4, [r2, r7]\n \tmovs\tr1, r1\n-\tldmia\tr2!, {r1, r3, r4, r6, r7}\n+\tldmia\tr2!, {r1, r5, r6, r7}\n \tmovs\tr4, r1\n /usr/include/c++/10/bits/char_traits.h:329\n \tldr\tr5, [sp, #36]\t@ 0x24\n /usr/include/c++/10/bits/basic_string.h:183\n \tstr\tr3, [sp, #40]\t@ 0x28\n /usr/include/c++/10/bits/char_traits.h:329\n \tstrb\tr7, [r5, r3]\n@@ -1717919,15 +1717919,15 @@\n \tadd.w\tr0, r4, #312\t@ 0x138\n \tbl\t19c23c >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, int const&)@@Base+0xdf8>\n \tadd.w\tr0, r4, #168\t@ 0xa8\n \tbl\t3575ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9778>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tb.n\t350286 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2452>\n \tnop\n-\tbgt.n\t350390 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b255c>\n+\tbgt.n\t3503a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b256c>\n \tmovs\tr2, r1\n \tldmia\tr5!, {r1, r2, r6, r7}\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr5, #58\t@ 0x3a\n \tmovs\tr0, r3\n@@ -1718940,43 +1718940,43 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #11\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #712]\t@ 0x2c8\n+\tstr\tr3, [sp, #744]\t@ 0x2e8\n \tmovs\tr4, r1\n \tcmp\tr2, #134\t@ 0x86\n \tmovs\tr0, r3\n-\tstmia\tr6!, {r2, r3, r7}\n+\tstmia\tr6!, {r2, r4, r7}\n \tmovs\tr4, r1\n \tcmp\tr2, #74\t@ 0x4a\n \tmovs\tr0, r3\n \tcmp\tr2, #72\t@ 0x48\n \tmovs\tr0, r3\n-\tbeq.n\t350b34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2d00>\n+\tbeq.n\t350b44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2d10>\n \tmovs\tr4, r1\n-\tbeq.n\t350b28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2cf4>\n+\tbeq.n\t350b38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2d04>\n \tmovs\tr4, r1\n-\tbeq.n\t350b54 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2d20>\n+\tbeq.n\t350b64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2d30>\n \tmovs\tr4, r1\n-\tldrh\tr0, [r0, #36]\t@ 0x24\n+\tldrh\tr0, [r1, #36]\t@ 0x24\n \tmovs\tr4, r1\n \tmovs\tr4, #94\t@ 0x5e\n \tmovs\tr0, r3\n-\tasrs\tr2, r1, #25\n+\tasrs\tr2, r2, #25\n \tmovs\tr3, r1\n-\tldmia\tr2, {r2, r3, r4, r5, r6, r7}\n+\tldmia\tr3!, {r2}\n \tmovs\tr4, r1\n-\tldmia\tr3!, {r1, r2}\n+\tldmia\tr3, {r1, r2, r3}\n \tmovs\tr4, r1\n-\tldmia\tr3!, {r2, r5}\n+\tldmia\tr3, {r2, r3, r5}\n \tmovs\tr4, r1\n-\tldrh\tr2, [r5, r2]\n+\tldrh\tr6, [r6, r2]\n \tmovs\tr1, r1\n \tmovs\tr4, #6\n \tmovs\tr0, r3\n \tsub.w\tr0, r5, #8192\t@ 0x2000\n \tsub.w\tr1, r0, #9\n \tcmp\tr1, #216\t@ 0xd8\n \tbhi.w\t350a8e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b2c5a>\n@@ -1720984,145 +1720984,145 @@\n \tmov\tr0, r4\n \tbl\t342338 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a4504>\n \tldr\tr6, [sp, #8]\n \tstr.w\tr0, [r6, #2144]\t@ 0x860\n ./src/mira/parameters.C:3691\n \tb.w\t3504fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b26c8>\n \tnop\n-\tcbnz\tr0, 351dca , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b3f96>\n+\tcbnz\tr0, 351dcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b3f98>\n \tmovs\tr4, r1\n \tsubs\tr6, r1, #5\n \tmovs\tr0, r3\n-\tstrh\tr0, [r0, #58]\t@ 0x3a\n+\tstrh\tr0, [r1, #58]\t@ 0x3a\n \tmovs\tr4, r1\n \tsubs\tr6, r3, #4\n \tmovs\tr0, r3\n-\tasrs\tr0, r1, #4\n+\tasrs\tr0, r2, #4\n \tmovs\tr3, r1\n-\tstmia\tr5!, {r3, r5, r6}\n+\tstmia\tr5!, {r4, r5, r6}\n \tmovs\tr4, r1\n \tsubs\tr4, r5, #3\n \tmovs\tr0, r3\n-\tstrb\tr0, [r6, r5]\n+\tstrb\tr4, [r7, r5]\n \tmovs\tr1, r1\n \tsubs\tr4, r1, #3\n \tmovs\tr0, r3\n-\tstmia\tr6!, {r3, r6}\n+\tstmia\tr6!, {r4, r6}\n \tmovs\tr4, r1\n-\tstmia\tr6!, {r3, r4, r6}\n+\tstmia\tr6!, {r5, r6}\n \tmovs\tr4, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tpop\t{r1, r4, r5, pc}\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tble.n\t351e34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4000>\n+\tble.n\t351e4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4018>\n \tmovs\tr1, r1\n-\tstmia\tr4!, {r2, r6}\n+\tstmia\tr4!, {r2, r3, r6}\n \tmovs\tr4, r1\n \tsubs\tr0, r6, r5\n \tmovs\tr0, r3\n-\tstrh\tr0, [r3, #24]\n+\tstrh\tr0, [r4, #24]\n \tmovs\tr4, r1\n \tsubs\tr6, r6, r3\n \tmovs\tr0, r3\n-\tbkpt\t0x0094\n+\tbkpt\t0x009c\n \tmovs\tr4, r1\n-\titet\tgt\n-\tmovgt\tr4, r1\n-\tsuble\tr0, r1, r3\n+\titee\tle\n+\tmovle\tr4, r1\n+\tsubgt\tr0, r1, r3\n \tmovgt\tr0, r3\n-\tbkpt\t0x0046\n+\tbkpt\t0x004e\n \tmovs\tr4, r1\n-\tstr\tr4, [r0, r5]\n+\tstr\tr0, [r2, r5]\n \tmovs\tr1, r1\n \tsubs\tr0, r4, r2\n \tmovs\tr0, r3\n-\tstrh\tr0, [r4, #20]\n+\tstrh\tr0, [r5, #20]\n \tmovs\tr4, r1\n \tsubs\tr6, r7, r1\n \tmovs\tr0, r3\n-\tbkpt\t0x001c\n+\tbkpt\t0x0024\n \tmovs\tr4, r1\n-\tbkpt\t0x001a\n+\tbkpt\t0x0022\n \tmovs\tr4, r1\n \tsubs\tr0, r2, r1\n \tmovs\tr0, r3\n-\tpop\t{r1, r2, r3, r6, r7, pc}\n+\tpop\t{r1, r2, r4, r6, r7, pc}\n \tmovs\tr4, r1\n-\tstr\tr4, [r1, r3]\n+\tstr\tr0, [r3, r3]\n \tmovs\tr1, r1\n \tsubs\tr0, r5, r0\n \tmovs\tr0, r3\n-\tstrh\tr0, [r5, #16]\n+\tstrh\tr0, [r6, #16]\n \tmovs\tr4, r1\n \tsubs\tr6, r0, r0\n \tmovs\tr0, r3\n-\tpop\t{r2, r5, r7, pc}\n+\tpop\t{r2, r3, r5, r7, pc}\n \tmovs\tr4, r1\n-\tbkpt\t0x004e\n+\tbkpt\t0x0056\n \tmovs\tr4, r1\n \tadds\tr0, r3, r7\n \tmovs\tr0, r3\n-\tpop\t{r1, r2, r4, r6, pc}\n+\tpop\t{r1, r2, r3, r4, r6, pc}\n \tmovs\tr4, r1\n-\tstr\tr4, [r2, r1]\n+\tstr\tr0, [r4, r1]\n \tmovs\tr1, r1\n \tadds\tr0, r6, r6\n \tmovs\tr0, r3\n-\tstrh\tr0, [r6, #12]\n+\tstrh\tr0, [r7, #12]\n \tmovs\tr4, r1\n \tadds\tr6, r1, r6\n \tmovs\tr0, r3\n-\tlsrs\tr0, r7, #13\n+\tlsrs\tr0, r0, #14\n \tmovs\tr3, r1\n-\tit\tvc\n-\tmovvc\tr4, r1\n+\tnop\t{8}\n+\tmovs\tr4, r1\n \tadds\tr4, r3, r5\n \tmovs\tr0, r3\n-\tpop\t{r3, r4, r6, r7}\n+\tpop\t{r5, r6, r7}\n \tmovs\tr4, r1\n-\tldr\tr7, [pc, #856]\t@ (352188 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4354>)\n+\tldr\tr7, [pc, #904]\t@ (3521b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4384>)\n \tmovs\tr1, r1\n \tadds\tr2, r6, r4\n \tmovs\tr0, r3\n-\tldrb\tr2, [r7, #31]\n+\tstrh\tr2, [r0, #0]\n \tmovs\tr4, r1\n \tasrs\tr0, r3, #31\n \tmovs\tr0, r3\n-\tlsrs\tr2, r0, #7\n+\tlsrs\tr2, r1, #7\n \tmovs\tr3, r1\n-\tpop\t{r1, r2, r3, r4, r5, r6, r7, pc}\n+\tbkpt\t0x0006\n \tmovs\tr4, r1\n \tasrs\tr6, r4, #30\n \tmovs\tr0, r3\n-\tcbnz\tr2, 351e94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4060>\n+\tcbnz\tr2, 351e96 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4062>\n \tmovs\tr4, r1\n-\tldr\tr6, [pc, #128]\t@ (351ed0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b409c>)\n+\tldr\tr6, [pc, #176]\t@ (351f00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b40cc>)\n \tmovs\tr1, r1\n \tasrs\tr4, r7, #29\n \tmovs\tr0, r3\n-\tldrb\tr6, [r7, #29]\n+\tldrb\tr6, [r0, #30]\n \tmovs\tr4, r1\n \tasrs\tr4, r3, #29\n \tmovs\tr0, r3\n-\trevsh\tr2, r7\n+\tcbnz\tr2, 351ea0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b406c>\n \tmovs\tr4, r1\n-\tcbnz\tr0, 351edc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b40a8>\n+\tcbnz\tr0, 351ede , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b40aa>\n \tmovs\tr4, r1\n \tasrs\tr6, r5, #28\n \tmovs\tr0, r3\n-\thlt\t0x002c\n+\thlt\t0x0034\n \tmovs\tr4, r1\n-\tldr\tr5, [pc, #680]\t@ (352118 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b42e4>)\n+\tldr\tr5, [pc, #728]\t@ (352148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4314>)\n \tmovs\tr1, r1\n \tasrs\tr6, r0, #28\n \tmovs\tr0, r3\n-\torn\tr0, r2, #12\n+\torn\tr0, sl, #12\n ./src/mira/parameters.C:3694\n \tmov\tr2, r8\n \tmov\tr1, r4\n \tmov\tr0, fp\n \tbl\t34287c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1a4a48>\n ./src/mira/parameters.C:3695\n \tmov\tr1, r8\n@@ -1722913,93 +1722913,93 @@\n ./src/mira/parameters.C:3016\n \tb.w\t3504fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b26c8>\n \tnop\n \tlsrs\tr4, r3, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #712\t@ 0x2c8\n+\tadd\tr3, sp, #744\t@ 0x2e8\n \tmovs\tr4, r1\n-\tadd\tr3, sp, #896\t@ 0x380\n+\tadd\tr3, sp, #928\t@ 0x3a0\n \tmovs\tr4, r1\n-\tadd\tr4, sp, #240\t@ 0xf0\n+\tadd\tr4, sp, #272\t@ 0x110\n \tmovs\tr4, r1\n-\tcbnz\tr2, 352d66 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4f32>\n+\tcbnz\tr2, 352d68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4f34>\n \tmovs\tr2, r1\n-\tadd\tr4, sp, #392\t@ 0x188\n+\tadd\tr4, sp, #424\t@ 0x1a8\n \tmovs\tr4, r1\n-\tadd\tr7, sp, #144\t@ 0x90\n+\tadd\tr7, sp, #176\t@ 0xb0\n \tmovs\tr4, r1\n-\tadd\tr5, pc, #848\t@ (adr r5, 353060 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b522c>)\n+\tadd\tr5, pc, #880\t@ (adr r5, 353080 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b524c>)\n \tmovs\tr4, r1\n \tlsrs\tr2, r1, #7\n \tmovs\tr0, r3\n \tlsrs\tr4, r6, #6\n \tmovs\tr0, r3\n-\tstrh\tr0, [r7, #22]\n+\tstrh\tr0, [r0, #24]\n \tmovs\tr4, r1\n-\tadd\tr0, sp, #136\t@ 0x88\n+\tadd\tr0, sp, #168\t@ 0xa8\n \tmovs\tr4, r1\n \tlsrs\tr6, r6, #5\n \tmovs\tr0, r3\n-\tstrh\tr2, [r2, #22]\n+\tstrh\tr2, [r3, #22]\n \tmovs\tr4, r1\n-\tadd\tr7, pc, #912\t@ (adr r7, 3530bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b5288>)\n+\tadd\tr7, pc, #944\t@ (adr r7, 3530dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b52a8>)\n \tmovs\tr4, r1\n \tlsrs\tr0, r7, #4\n \tmovs\tr0, r3\n-\tstrh\tr4, [r1, #22]\n+\tstrh\tr4, [r2, #22]\n \tmovs\tr4, r1\n-\tadd\tr7, pc, #664\t@ (adr r7, 352fd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b519c>)\n+\tadd\tr7, pc, #696\t@ (adr r7, 352ff0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b51bc>)\n \tmovs\tr4, r1\n-\tstrh\tr6, [r5, #20]\n+\tstrh\tr6, [r6, #20]\n \tmovs\tr4, r1\n-\tadd\tr7, pc, #448\t@ (adr r7, 352f00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b50cc>)\n+\tadd\tr7, pc, #480\t@ (adr r7, 352f20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b50ec>)\n \tmovs\tr4, r1\n-\tadd\tr0, sp, #712\t@ 0x2c8\n+\tadd\tr0, sp, #744\t@ 0x2e8\n \tmovs\tr4, r1\n \tlsrs\tr2, r7, #2\n \tmovs\tr0, r3\n-\tstrh\tr6, [r5, #18]\n+\tstrh\tr6, [r6, #18]\n \tmovs\tr4, r1\n-\tadd\tr7, pc, #96\t@ (adr r7, 352db0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4f7c>)\n+\tadd\tr7, pc, #128\t@ (adr r7, 352dd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4f9c>)\n \tmovs\tr4, r1\n \tlsrs\tr6, r5, #1\n \tmovs\tr0, r3\n-\tstrh\tr6, [r4, #14]\n+\tstrh\tr6, [r5, #14]\n \tmovs\tr4, r1\n-\tadd\tr6, pc, #880\t@ (adr r6, 3530cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b5298>)\n+\tadd\tr6, pc, #912\t@ (adr r6, 3530ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b52b8>)\n \tmovs\tr4, r1\n \tlsrs\tr6, r0, #32\n \tmovs\tr0, r3\n-\tadd\tr6, pc, #136\t@ (adr r6, 352dec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4fb8>)\n+\tadd\tr6, pc, #168\t@ (adr r6, 352e0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4fd8>)\n \tmovs\tr4, r1\n \tlsls\tr6, r7, #28\n \tmovs\tr0, r3\n-\tadd\tr5, pc, #416\t@ (adr r5, 352f0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b50d8>)\n+\tadd\tr5, pc, #448\t@ (adr r5, 352f2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b50f8>)\n \tmovs\tr4, r1\n-\tadd\tr5, pc, #648\t@ (adr r5, 352ff8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b51c4>)\n+\tadd\tr5, pc, #680\t@ (adr r5, 353018 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b51e4>)\n \tmovs\tr4, r1\n \tlsls\tr0, r7, #27\n \tmovs\tr0, r3\n-\tstrh\tr4, [r1, #0]\n+\tstrh\tr4, [r2, #0]\n \tmovs\tr4, r1\n-\tadd\tr5, pc, #408\t@ (adr r5, 352f14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b50e0>)\n+\tadd\tr5, pc, #440\t@ (adr r5, 352f34 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b5100>)\n \tmovs\tr4, r1\n \tlsls\tr4, r7, #26\n \tmovs\tr0, r3\n-\tldrb\tr0, [r5, #31]\n+\tldrb\tr0, [r6, #31]\n \tmovs\tr4, r1\n-\tadd\tr5, pc, #168\t@ (adr r5, 352e30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b4ffc>)\n+\tadd\tr5, pc, #200\t@ (adr r5, 352e50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b501c>)\n \tmovs\tr4, r1\n \tlsrs\tr0, r4, #31\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #672\t@ (adr r5, 353030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b51fc>)\n+\tadd\tr5, pc, #704\t@ (adr r5, 353050 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b521c>)\n \tmovs\tr4, r1\n-\tldr\tr7, [sp, #408]\t@ 0x198\n+\tldr\tr7, [sp, #440]\t@ 0x1b8\n \tmovs\tr4, r1\n \tlsls\tr2, r1, #11\n \tmovs\tr0, r3\n ./src/mira/parameters.C:3019\n \tmov\tr2, r8\n \tmov\tr1, r4\n \tmov\tr0, fp\n@@ -1726222,118 +1726222,118 @@\n \tcmp\tr0, #0\n \tbeq.n\t35472e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b68fa>\n /usr/include/c++/10/ext/new_allocator.h:133\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t35472e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b68fa>\n \tnop\n-\tstr\tr7, [sp, #568]\t@ 0x238\n+\tstr\tr7, [sp, #600]\t@ 0x258\n \tmovs\tr4, r1\n \t\t\t@ instruction: 0xf3e00017\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #96]\t@ 0x60\n-\tmovs\tr4, r1\n \tstr\tr3, [sp, #128]\t@ 0x80\n \tmovs\tr4, r1\n-\tstr\tr3, [sp, #32]\n+\tstr\tr3, [sp, #160]\t@ 0xa0\n \tmovs\tr4, r1\n-\tmovs\tr3, #200\t@ 0xc8\n+\tstr\tr3, [sp, #64]\t@ 0x40\n \tmovs\tr4, r1\n-\tcmp\tr4, r4\n+\tmovs\tr3, #208\t@ 0xd0\n \tmovs\tr4, r1\n-\tldr\tr3, [pc, #504]\t@ (3549f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6bc4>)\n+\tcmp\tr4, r5\n \tmovs\tr4, r1\n-\tldr\tr3, [pc, #656]\t@ (354a94 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6c60>)\n+\tldr\tr3, [pc, #536]\t@ (354a18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6be4>)\n \tmovs\tr4, r1\n-\tldrh\tr6, [r3, #32]\n+\tldr\tr3, [pc, #688]\t@ (354ab4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6c80>)\n \tmovs\tr4, r1\n-\tldrh\tr2, [r7, #42]\t@ 0x2a\n+\tldrh\tr6, [r4, #32]\n \tmovs\tr4, r1\n-\tldrh\tr0, [r4, #46]\t@ 0x2e\n+\tldrh\tr2, [r0, #44]\t@ 0x2c\n \tmovs\tr4, r1\n-\tldrh\tr4, [r7, #26]\n+\tldrh\tr0, [r5, #46]\t@ 0x2e\n \tmovs\tr4, r1\n-\tldrh\tr4, [r2, #26]\n+\tldrh\tr4, [r0, #28]\n+\tmovs\tr4, r1\n+\tldrh\tr4, [r3, #26]\n \tmovs\tr4, r1\n-\tldrh\tr6, [r7, #12]\n+\tldrh\tr6, [r0, #14]\n \tmovs\tr4, r1\n \tmcrr\t0, 1, r0, r2, cr7\n-\tldrh\tr0, [r7, #14]\n+\tldrh\tr0, [r0, #16]\n \tmovs\tr4, r1\n \tstc\t0, cr0, [r4], #-92\t@ 0xffffffa4\n-\tldrh\tr4, [r0, #26]\n+\tldrh\tr4, [r1, #26]\n \tmovs\tr4, r1\n-\tldrh\tr2, [r2, #4]\n+\tldrh\tr2, [r3, #4]\n \tmovs\tr4, r1\n \trsbs\tr0, r6, r7, lsr #32\n-\tldrh\tr0, [r4, #6]\n+\tldrh\tr0, [r5, #6]\n \tmovs\tr4, r1\n \tsub.w\tr0, r0, r7, lsr #32\n-\tldrh\tr6, [r0, #4]\n+\tldrh\tr6, [r1, #4]\n \tmovs\tr4, r1\n \tsbc.w\tr0, sl, r7, lsr #32\n-\tldrh\tr4, [r3, #10]\n+\tldrh\tr4, [r4, #10]\n \tmovs\tr4, r1\n \tadc.w\tr0, ip, r7, lsr #32\n-\tldrh\tr0, [r3, #0]\n+\tldrh\tr0, [r4, #0]\n \tmovs\tr4, r1\n \t\t\t@ instruction: 0xeb300017\n-\tldrh\tr2, [r7, #4]\n+\tldrh\tr2, [r0, #6]\n \tmovs\tr4, r1\n \tadds.w\tr0, r2, r7, lsr #32\n-\tldrh\tr0, [r3, #2]\n+\tldrh\tr0, [r4, #2]\n \tmovs\tr4, r1\n \t\t\t@ instruction: 0xeaf40017\n-\tldrh\tr6, [r6, #14]\n+\tldrh\tr6, [r7, #14]\n \tmovs\tr4, r1\n-\tldrh\tr2, [r6, #14]\n+\tldrh\tr2, [r7, #14]\n \tmovs\tr4, r1\n-\tstrh\tr6, [r0, #48]\t@ 0x30\n+\tstrh\tr6, [r1, #48]\t@ 0x30\n \tmovs\tr4, r1\n-\tsbcs\tr6, r1\n+\tsbcs\tr6, r2\n \tmovs\tr2, r1\n-\tstrh\tr6, [r5, #46]\t@ 0x2e\n+\tstrh\tr6, [r6, #46]\t@ 0x2e\n \tmovs\tr4, r1\n \torns\tr0, ip, r7, lsr #32\n-\tmovs\tr0, #244\t@ 0xf4\n+\tmovs\tr1, #0\n \tmovs\tr1, r1\n-\tstr\tr1, [sp, #704]\t@ 0x2c0\n+\tstr\tr1, [sp, #736]\t@ 0x2e0\n \tmovs\tr4, r1\n-\tstr\tr1, [sp, #848]\t@ 0x350\n+\tstr\tr1, [sp, #880]\t@ 0x370\n \tmovs\tr4, r1\n-\tstr\tr2, [sp, #96]\t@ 0x60\n+\tstr\tr2, [sp, #128]\t@ 0x80\n \tmovs\tr4, r1\n-\tstrh\tr4, [r4, #48]\t@ 0x30\n+\tstrh\tr4, [r5, #48]\t@ 0x30\n \tmovs\tr4, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldrh\tr0, [r1, #34]\t@ 0x22\n+\tldrh\tr0, [r2, #34]\t@ 0x22\n \tmovs\tr4, r1\n-\tldrh\tr6, [r0, #34]\t@ 0x22\n+\tldrh\tr6, [r1, #34]\t@ 0x22\n \tmovs\tr4, r1\n-\tstrh\tr6, [r4, #44]\t@ 0x2c\n+\tstrh\tr6, [r5, #44]\t@ 0x2c\n \tmovs\tr4, r1\n-\tldrh\tr0, [r0, #28]\n+\tldrh\tr0, [r1, #28]\n \tmovs\tr4, r1\n-\tstrh\tr0, [r0, #42]\t@ 0x2a\n+\tstrh\tr0, [r1, #42]\t@ 0x2a\n \tmovs\tr4, r1\n-\tstr\tr1, [sp, #384]\t@ 0x180\n+\tstr\tr1, [sp, #416]\t@ 0x1a0\n \tmovs\tr4, r1\n-\tstrh\tr2, [r1, #38]\t@ 0x26\n+\tstrh\tr2, [r2, #38]\t@ 0x26\n \tmovs\tr4, r1\n-\tstrh\tr6, [r1, #38]\t@ 0x26\n+\tstrh\tr6, [r2, #38]\t@ 0x26\n \tmovs\tr4, r1\n-\tnegs\tr4, r7\n+\tcmp\tr4, r0\n \tmovs\tr4, r1\n-\tmuls\tr6, r6\n+\tmuls\tr6, r7\n \tmovs\tr4, r1\n-\tbics\tr4, r3\n+\tbics\tr4, r4\n \tmovs\tr4, r1\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr.w\tr0, [sl]\n /usr/include/c++/10/bits/basic_string.h:231\n \tcmp\tr0, r9\n \tbeq.w\t3547ca , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6996>\n /usr/include/c++/10/bits/basic_string.h:237\n@@ -1726582,27 +1726582,27 @@\n \tadds\tr1, #1\n \tblx\tb538 \n ./src/mira/parameters.C:4128 (discriminator 17)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t354986 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6b52>\n \tb.n\t354a92 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6c5e>\n-\tldr\tr6, [pc, #120]\t@ (354b18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6ce4>)\n+\tldr\tr6, [pc, #152]\t@ (354b38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6d04>)\n \tmovs\tr4, r1\n \tb.n\t3546a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b686c>\n \tmovs\tr7, r2\n-\tldrh\tr6, [r0, #10]\n+\tldrh\tr6, [r1, #10]\n \tmovs\tr4, r1\n \tb.n\t354668 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b6834>\n \tmovs\tr7, r2\n-\tadds\tr2, r5, #1\n+\tadds\tr6, r6, #1\n \tmovs\tr1, r1\n \tb.n\t354640 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b680c>\n \tmovs\tr7, r2\n-\tldrh\tr2, [r3, #8]\n+\tldrh\tr2, [r4, #8]\n \tmovs\tr4, r1\n MIRAParameters::loadParams(std::__cxx11::basic_string, std::allocator > const&, std::vector >&):\n ./src/mira/parameters.C:2341\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr4, [pc, #1664]\t@ 355140 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b730c>\n \tldr.w\tr2, [pc, #1664]\t@ 355144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b7310>\n@@ -1727459,21 +1727459,21 @@\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr2, [r1, #36]\t@ 0x24\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr4, [r0, #38]\t@ 0x26\n+\tldrh\tr4, [r1, #38]\t@ 0x26\n \tmovs\tr4, r1\n \tb.n\t355918 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b7ae4>\n \tmovs\tr7, r2\n-\tldrh\tr0, [r6, #28]\n+\tldrh\tr0, [r7, #28]\n \tmovs\tr4, r1\n-\tldrh\tr4, [r7, #24]\n+\tldrh\tr4, [r0, #26]\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tb.n\t355560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b772c>\n \tmovs\tr7, r2\n@@ -1727489,21 +1727489,21 @@\n \tmovs\tr0, r0\n \tb.n\t35534c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b7518>\n \tmovs\tr7, r2\n \tstrh\tr4, [r7, #6]\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #504]\t@ 0x1f8\n+\tldr\tr6, [sp, #552]\t@ 0x228\n \tmovs\tr1, r1\n-\tldrh\tr0, [r0, #0]\n+\tldrh\tr0, [r1, #0]\n \tmovs\tr4, r1\n-\tstrh\tr6, [r6, #58]\t@ 0x3a\n+\tstrh\tr6, [r7, #58]\t@ 0x3a\n \tmovs\tr4, r1\n-\tstrh\tr0, [r3, #60]\t@ 0x3c\n+\tstrh\tr0, [r4, #60]\t@ 0x3c\n \tmovs\tr4, r1\n MIRAParameters::parse(int, char**, std::vector >&, bool):\n ./src/mira/parameters.C:2375\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n \tldr\tr4, [pc, #980]\t@ (355578 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b7744>)\n \tvpush\t{d8-d9}\n@@ -1728058,20 +1728058,20 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr0, [r1, #46]\t@ 0x2e\n+\tstrh\tr0, [r2, #46]\t@ 0x2e\n \tmovs\tr4, r1\n-\tstrd\tr0, r0, [ip, #-48]!\t@ 0x30\n-\tstrh\tr2, [r7, #44]\t@ 0x2c\n+\tldrd\tr0, r0, [r4, #-48]!\t@ 0x30\n+\tstrh\tr2, [r0, #46]\t@ 0x2e\n \tmovs\tr4, r1\n-\tasrs\tr4, r4, #9\n+\tasrs\tr0, r6, #9\n \tmovs\tr1, r1\n \tldrb\tr6, [r0, #14]\n \tmovs\tr5, r2\n MIRAParameters::parse(char const*, std::vector >&, bool):\n ./src/mira/parameters.C:2390\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_ios.h:462\n@@ -1728842,17 +1728842,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr4, [r2, #29]\n+\tldrb\tr4, [r3, #29]\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0x4786\n+\t\t\t@ instruction: 0x478e\n \tmovs\tr4, r1\n \tstrb\tr6, [r0, #20]\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n MIRAParameters::parseQuickmodeNoTechSettingsChange(char const*, char const*, std::vector >&, bool):\n ./src/mira/parameters.C:2413\n@@ -1729928,51 +1729928,51 @@\n \tb.n\t35632c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b84f8>\n \tb.n\t3563ba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b8586>\n \tnop\n \tstrb\tr4, [r5, #8]\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr0, [r2, #10]\n+\tldrb\tr0, [r3, #10]\n \tmovs\tr4, r1\n-\tldrb\tr2, [r2, #11]\n+\tldrb\tr2, [r3, #11]\n \tmovs\tr4, r1\n-\tldrb\tr0, [r3, #12]\n+\tldrb\tr0, [r4, #12]\n \tmovs\tr4, r1\n-\tldrb\tr4, [r4, #6]\n+\tldrb\tr4, [r5, #6]\n \tmovs\tr4, r1\n-\tldrb\tr2, [r4, #2]\n+\tldrb\tr2, [r5, #2]\n \tmovs\tr4, r1\n-\tldrb\tr4, [r2, #6]\n+\tldrb\tr4, [r3, #6]\n \tmovs\tr4, r1\n-\tldrb\tr6, [r4, #3]\n+\tldrb\tr6, [r5, #3]\n \tmovs\tr4, r1\n-\tldrb\tr4, [r0, #6]\n+\tldrb\tr4, [r1, #6]\n \tmovs\tr4, r1\n-\tldrb\tr6, [r5, #4]\n+\tldrb\tr6, [r6, #4]\n \tmovs\tr4, r1\n-\tldrb\tr4, [r6, #5]\n+\tldrb\tr4, [r7, #5]\n \tmovs\tr4, r1\n-\tldrb\tr6, [r4, #5]\n+\tldrb\tr6, [r5, #5]\n \tmovs\tr4, r1\n-\tldrb\tr0, [r3, #5]\n+\tldrb\tr0, [r4, #5]\n \tmovs\tr4, r1\n \tldr\tr2, [r1, #96]\t@ 0x60\n \tmovs\tr5, r2\n-\tstrb\tr6, [r7, #23]\n+\tstrb\tr6, [r0, #24]\n \tmovs\tr4, r1\n-\tstrb\tr2, [r5, #27]\n+\tstrb\tr2, [r6, #27]\n \tmovs\tr4, r1\n-\tstrb\tr6, [r1, #28]\n+\tstrb\tr6, [r2, #28]\n \tmovs\tr4, r1\n-\tstrb\tr0, [r2, #29]\n+\tstrb\tr0, [r3, #29]\n \tmovs\tr4, r1\n-\tstrb\tr2, [r7, #23]\n+\tstrb\tr2, [r0, #24]\n \tmovs\tr4, r1\n-\tstrb\tr6, [r0, #22]\n+\tstrb\tr6, [r1, #22]\n \tmovs\tr4, r1\n MIRAParameters::interpretJobDefs(std::vector >&, std::vector >, std::allocator > > >&, std::__cxx11::basic_stringstream, std::allocator >&):\n ./src/mira/parameters.C:4371\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n \tldr.w\tr0, [pc, #3296]\t@ 35710c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b92d8>\n \tldr.w\tr3, [pc, #3296]\t@ 357110 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b92dc>\n@@ -1731510,201 +1731510,201 @@\n \tnop\n \tldr\tr4, [r5, #48]\t@ 0x30\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [r3, #48]\t@ 0x30\n \tmovs\tr5, r2\n-\tadds\tr2, #2\n+\tadds\tr2, #10\n \tmovs\tr4, r1\n \tldmia\tr1!, {r2, r3, r5, r6, r7}\n \tmovs\tr7, r2\n-\tadd\tr3, pc, #680\t@ (adr r3, 3573cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9598>)\n+\tadd\tr3, pc, #712\t@ (adr r3, 3573ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b95b8>)\n \tmovs\tr4, r1\n-\tldrb\tr4, [r5, #1]\n+\tldrb\tr4, [r6, #1]\n \tmovs\tr4, r1\n-\tadd\tr2, pc, #688\t@ (adr r2, 3573dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b95a8>)\n+\tadd\tr2, pc, #720\t@ (adr r2, 3573fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b95c8>)\n \tmovs\tr4, r1\n-\tadd\tr2, pc, #552\t@ (adr r2, 357358 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9524>)\n+\tadd\tr2, pc, #584\t@ (adr r2, 357378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9544>)\n \tmovs\tr4, r1\n-\tstr\tr3, [sp, #648]\t@ 0x288\n+\tstr\tr3, [sp, #680]\t@ 0x2a8\n \tmovs\tr4, r1\n-\tcmp\tr7, #210\t@ 0xd2\n+\tcmp\tr7, #218\t@ 0xda\n \tmovs\tr4, r1\n \tstmia\tr7!, {r1, r3, r4, r5, r7}\n \tmovs\tr7, r2\n-\tcbnz\tr6, 357166 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9332>\n+\tcbnz\tr6, 357168 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9334>\n \tmovs\tr2, r1\n-\tstrb\tr2, [r3, #19]\n+\tstrb\tr2, [r4, #19]\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr0, [r0, #20]\n+\tstrb\tr0, [r1, #20]\n \tmovs\tr4, r1\n-\tstrb\tr2, [r2, #21]\n+\tstrb\tr2, [r3, #21]\n \tmovs\tr4, r1\n \tstmia\tr7!, {r1, r3, r4}\n \tmovs\tr7, r2\n-\tcmp\tr7, #36\t@ 0x24\n+\tcmp\tr7, #44\t@ 0x2c\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb8f2\n+\t\t\t@ instruction: 0xb8fa\n \tmovs\tr2, r1\n-\tstrb\tr2, [r7, #20]\n+\tstrb\tr2, [r0, #21]\n \tmovs\tr4, r1\n-\tcmp\tr6, #222\t@ 0xde\n+\tcmp\tr6, #230\t@ 0xe6\n \tmovs\tr4, r1\n \tstmia\tr6!, {r1, r2, r6, r7}\n \tmovs\tr7, r2\n-\t\t\t@ instruction: 0xb8aa\n+\t\t\t@ instruction: 0xb8b2\n \tmovs\tr2, r1\n-\tstrb\tr6, [r5, #17]\n+\tstrb\tr6, [r6, #17]\n \tmovs\tr4, r1\n-\tldr\tr0, [sp, #200]\t@ 0xc8\n+\tldr\tr0, [sp, #232]\t@ 0xe8\n \tmovs\tr4, r1\n-\tldr\tr7, [sp, #232]\t@ 0xe8\n+\tldr\tr7, [sp, #264]\t@ 0x108\n \tmovs\tr4, r1\n-\tldr\tr7, [sp, #328]\t@ 0x148\n+\tldr\tr7, [sp, #360]\t@ 0x168\n \tmovs\tr4, r1\n \tstr\tr4, [r4, #100]\t@ 0x64\n \tmovs\tr5, r2\n-\t\t\t@ instruction: 0xb7d2\n+\t\t\t@ instruction: 0xb7da\n \tmovs\tr2, r1\n-\tstrb\tr4, [r3, #17]\n+\tstrb\tr4, [r4, #17]\n \tmovs\tr4, r1\n-\tstrb\tr2, [r1, #17]\n+\tstrb\tr2, [r2, #17]\n \tmovs\tr4, r1\n-\tldr\tr7, [sp, #176]\t@ 0xb0\n+\tldr\tr7, [sp, #208]\t@ 0xd0\n \tmovs\tr4, r1\n-\tldrh\tr4, [r5, #26]\n+\tldrh\tr4, [r6, #26]\n \tmovs\tr4, r1\n-\tldrh\tr0, [r0, #26]\n+\tldrh\tr0, [r1, #26]\n \tmovs\tr4, r1\n-\tldr\tr4, [sp, #680]\t@ 0x2a8\n+\tldr\tr4, [sp, #712]\t@ 0x2c8\n \tmovs\tr4, r1\n-\tldr\tr5, [sp, #168]\t@ 0xa8\n+\tldr\tr5, [sp, #200]\t@ 0xc8\n \tmovs\tr4, r1\n-\tldr\tr3, [sp, #1008]\t@ 0x3f0\n+\tldr\tr4, [sp, #16]\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #472]\t@ 0x1d8\n+\tstr\tr5, [sp, #504]\t@ 0x1f8\n \tmovs\tr4, r1\n-\tstr\tr4, [sp, #640]\t@ 0x280\n+\tstr\tr4, [sp, #672]\t@ 0x2a0\n \tmovs\tr4, r1\n-\tstr\tr3, [sp, #272]\t@ 0x110\n+\tstr\tr3, [sp, #304]\t@ 0x130\n \tmovs\tr4, r1\n-\tstr\tr2, [sp, #416]\t@ 0x1a0\n+\tstr\tr2, [sp, #448]\t@ 0x1c0\n \tmovs\tr4, r1\n-\tstr\tr1, [sp, #576]\t@ 0x240\n+\tstr\tr1, [sp, #608]\t@ 0x260\n \tmovs\tr4, r1\n-\tstr\tr0, [sp, #656]\t@ 0x290\n+\tstr\tr0, [sp, #688]\t@ 0x2b0\n \tmovs\tr4, r1\n-\tldrh\tr0, [r5, #8]\n+\tldrh\tr0, [r6, #8]\n \tmovs\tr4, r1\n-\tstrh\tr6, [r0, #42]\t@ 0x2a\n+\tstrh\tr6, [r1, #42]\t@ 0x2a\n \tmovs\tr4, r1\n \tstmia\tr3!, {r3, r6, r7}\n \tmovs\tr7, r2\n-\tstrh\tr4, [r3, #22]\n+\tstrh\tr4, [r4, #22]\n \tmovs\tr4, r1\n-\tldrb\tr4, [r6, #30]\n+\tldrb\tr4, [r7, #30]\n \tmovs\tr4, r1\n-\tldrb\tr0, [r1, #18]\n+\tldrb\tr0, [r2, #18]\n \tmovs\tr4, r1\n-\tldrb\tr0, [r4, #5]\n+\tldrb\tr0, [r5, #5]\n \tmovs\tr4, r1\n \tstmia\tr3!, {r3, r4, r6}\n \tmovs\tr7, r2\n-\tstrb\tr0, [r3, #30]\n+\tstrb\tr0, [r4, #30]\n \tmovs\tr4, r1\n-\tsubs\tr0, r7, r0\n+\tsubs\tr0, r0, r1\n \tmovs\tr2, r1\n-\tstrb\tr0, [r3, #19]\n+\tstrb\tr0, [r4, #19]\n \tmovs\tr4, r1\n-\tldr\tr4, [sp, #720]\t@ 0x2d0\n+\tldr\tr4, [sp, #752]\t@ 0x2f0\n \tmovs\tr4, r1\n-\tldrh\tr4, [r5, #22]\n+\tldrh\tr4, [r6, #22]\n \tmovs\tr4, r1\n-\tldrh\tr2, [r0, #38]\t@ 0x26\n+\tldrh\tr2, [r1, #38]\t@ 0x26\n \tmovs\tr4, r1\n-\tldr\tr0, [sp, #312]\t@ 0x138\n+\tldr\tr0, [sp, #344]\t@ 0x158\n \tmovs\tr4, r1\n \tstmia\tr1!, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr7, r2\n-\tstr\tr7, [sp, #904]\t@ 0x388\n+\tstr\tr7, [sp, #936]\t@ 0x3a8\n \tmovs\tr4, r1\n-\tldr\tr0, [sp, #952]\t@ 0x3b8\n+\tldr\tr0, [sp, #984]\t@ 0x3d8\n \tmovs\tr4, r1\n-\tstr\tr3, [sp, #376]\t@ 0x178\n+\tstr\tr3, [sp, #408]\t@ 0x198\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #88]\t@ 0x58\n+\tstr\tr5, [sp, #120]\t@ 0x78\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #280]\t@ 0x118\n+\tstr\tr5, [sp, #312]\t@ 0x138\n \tmovs\tr4, r1\n \tstmia\tr0!, {r1, r2, r3, r6, r7}\n \tmovs\tr7, r2\n-\tstr\tr6, [sp, #840]\t@ 0x348\n+\tstr\tr6, [sp, #872]\t@ 0x368\n \tmovs\tr4, r1\n-\tstr\tr6, [sp, #576]\t@ 0x240\n+\tstr\tr6, [sp, #608]\t@ 0x260\n \tmovs\tr4, r1\n-\tstrh\tr2, [r2, #44]\t@ 0x2c\n+\tstrh\tr2, [r3, #44]\t@ 0x2c\n \tmovs\tr4, r1\n-\tstrh\tr4, [r0, #44]\t@ 0x2c\n+\tstrh\tr4, [r1, #44]\t@ 0x2c\n \tmovs\tr4, r1\n-\tstrh\tr2, [r6, #42]\t@ 0x2a\n+\tstrh\tr2, [r7, #42]\t@ 0x2a\n \tmovs\tr4, r1\n-\tstrh\tr0, [r6, #62]\t@ 0x3e\n+\tstrh\tr0, [r7, #62]\t@ 0x3e\n \tmovs\tr4, r1\n-\tstrh\tr2, [r6, #58]\t@ 0x3a\n+\tstrh\tr2, [r7, #58]\t@ 0x3a\n \tmovs\tr4, r1\n-\tldrh\tr0, [r0, #2]\n+\tldrh\tr0, [r1, #2]\n \tmovs\tr4, r1\n-\tldrh\tr6, [r0, #24]\n+\tldrh\tr6, [r1, #24]\n \tmovs\tr4, r1\n-\tldrh\tr4, [r4, #6]\n+\tldrh\tr4, [r5, #6]\n \tmovs\tr4, r1\n-\tstrh\tr2, [r0, #54]\t@ 0x36\n+\tstrh\tr2, [r1, #54]\t@ 0x36\n \tmovs\tr4, r1\n-\tstrb\tr0, [r3, #7]\n+\tstrb\tr0, [r4, #7]\n \tmovs\tr4, r1\n-\tldr\tr6, [r7, #76]\t@ 0x4c\n+\tldr\tr6, [r0, #80]\t@ 0x50\n \tmovs\tr4, r1\n-\tldrh\tr2, [r2, #14]\n+\tldrh\tr2, [r3, #14]\n \tmovs\tr4, r1\n-\tldrh\tr2, [r0, #10]\n+\tldrh\tr2, [r1, #10]\n \tmovs\tr4, r1\n-\tldrh\tr2, [r7, #4]\n+\tldrh\tr2, [r0, #6]\n \tmovs\tr4, r1\n-\tstrh\tr6, [r3, #42]\t@ 0x2a\n+\tstrh\tr6, [r4, #42]\t@ 0x2a\n \tmovs\tr4, r1\n-\tstrh\tr0, [r6, #38]\t@ 0x26\n+\tstrh\tr0, [r7, #38]\t@ 0x26\n \tmovs\tr4, r1\n-\tldr\tr6, [r0, #60]\t@ 0x3c\n+\tldr\tr6, [r1, #60]\t@ 0x3c\n \tmovs\tr4, r1\n-\tldr\tr0, [r7, #56]\t@ 0x38\n+\tldr\tr0, [r0, #60]\t@ 0x3c\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tbkpt\t0x00fc\n \tmovs\tr7, r2\n-\tstr\tr3, [sp, #848]\t@ 0x350\n+\tstr\tr3, [sp, #880]\t@ 0x370\n \tmovs\tr4, r1\n-\tstr\tr6, [sp, #56]\t@ 0x38\n+\tstr\tr6, [sp, #88]\t@ 0x58\n \tmovs\tr4, r1\n \tbkpt\t0x00a6\n \tmovs\tr7, r2\n-\tstr\tr3, [sp, #920]\t@ 0x398\n+\tstr\tr3, [sp, #952]\t@ 0x3b8\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #736]\t@ 0x2e0\n+\tstr\tr5, [sp, #768]\t@ 0x300\n \tmovs\tr4, r1\n \tbkpt\t0x0050\n \tmovs\tr7, r2\n-\tstr\tr3, [sp, #656]\t@ 0x290\n+\tstr\tr3, [sp, #688]\t@ 0x2b0\n \tmovs\tr4, r1\n-\tstr\tr5, [sp, #392]\t@ 0x188\n+\tstr\tr5, [sp, #424]\t@ 0x1a8\n \tmovs\tr4, r1\n ./src/mira/parameters.C:5229\n \tldr\tr2, [pc, #716]\t@ (357560 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b972c>)\n \tadd.w\tsl, sp, #68\t@ 0x44\n \tldr\tr1, [pc, #716]\t@ (357564 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9730>)\n \tmov\tr0, sl\n \tadd\tr2, pc\n@@ -1732102,49 +1732102,49 @@\n \tb.n\t35748a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9656>\n \tb.n\t357516 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b96e2>\n \tb.n\t35748a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9656>\n \tb.n\t35749a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9666>\n \tnop\n \tpop\t{r1, r4, r5, r6}\n \tmovs\tr7, r2\n-\tstr\tr2, [sp, #184]\t@ 0xb8\n+\tstr\tr2, [sp, #216]\t@ 0xd8\n \tmovs\tr4, r1\n-\tstr\tr2, [sp, #208]\t@ 0xd0\n+\tstr\tr2, [sp, #240]\t@ 0xf0\n \tmovs\tr4, r1\n \tpop\t{r3, r4}\n \tmovs\tr7, r2\n-\tstr\tr1, [sp, #432]\t@ 0x1b0\n+\tstr\tr1, [sp, #464]\t@ 0x1d0\n \tmovs\tr4, r1\n-\tstr\tr1, [sp, #472]\t@ 0x1d8\n+\tstr\tr1, [sp, #504]\t@ 0x1f8\n \tmovs\tr4, r1\n \tcbnz\tr4, 3575ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b97b8>\n \tmovs\tr7, r2\n-\tstr\tr1, [sp, #16]\n+\tstr\tr1, [sp, #48]\t@ 0x30\n \tmovs\tr4, r1\n-\tstr\tr0, [sp, #664]\t@ 0x298\n+\tstr\tr0, [sp, #696]\t@ 0x2b8\n \tmovs\tr4, r1\n \tcbnz\tr4, 3575e2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b97ae>\n \tmovs\tr7, r2\n-\tstr\tr0, [sp, #272]\t@ 0x110\n+\tstr\tr0, [sp, #304]\t@ 0x130\n \tmovs\tr4, r1\n-\tstr\tr0, [sp, #312]\t@ 0x138\n+\tstr\tr0, [sp, #344]\t@ 0x158\n \tmovs\tr4, r1\n \tcbnz\tr0, 3575da , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b97a6>\n \tmovs\tr7, r2\n-\tstr\tr0, [sp, #848]\t@ 0x350\n+\tstr\tr0, [sp, #880]\t@ 0x370\n \tmovs\tr4, r1\n-\tstr\tr2, [sp, #168]\t@ 0xa8\n+\tstr\tr2, [sp, #200]\t@ 0xc8\n \tmovs\tr4, r1\n-\tldrh\tr6, [r3, #50]\t@ 0x32\n+\tldrh\tr6, [r4, #50]\t@ 0x32\n \tmovs\tr4, r1\n-\tldrh\tr0, [r5, #46]\t@ 0x2e\n+\tldrh\tr0, [r6, #46]\t@ 0x2e\n \tmovs\tr4, r1\n-\tldrh\tr2, [r6, #42]\t@ 0x2a\n+\tldrh\tr2, [r7, #42]\t@ 0x2a\n \tmovs\tr4, r1\n-\tldrh\tr0, [r0, #40]\t@ 0x28\n+\tldrh\tr0, [r1, #40]\t@ 0x28\n \tmovs\tr4, r1\n align_parameters::~align_parameters():\n ./src/mira/../../src/mira/structs.H:393\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/bits/stl_vector.h:680\n \tldr\tr0, [r0, #68]\t@ 0x44\n@@ -1733089,69 +1733089,69 @@\n \tblx\tbd88 \n \tldr\tr4, [r2, r3]\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr0, [r6, r2]\n \tmovs\tr5, r2\n-\tbpl.n\t357c08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9dd4>\n+\tbpl.n\t357c18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1b9de4>\n \tmovs\tr1, r1\n-\tsubs\tr0, r1, #1\n+\tsubs\tr0, r2, #1\n \tmovs\tr4, r1\n-\tadds\tr4, r4, #6\n+\tadds\tr4, r5, #6\n \tmovs\tr4, r1\n \tldrsb\tr0, [r0, r2]\n \tmovs\tr5, r2\n-\tadds\tr4, r0, #4\n+\tadds\tr4, r1, #4\n \tmovs\tr4, r1\n-\tadds\tr0, r5, #3\n+\tadds\tr0, r6, #3\n \tmovs\tr4, r1\n-\tadds\tr6, r1, #3\n+\tadds\tr6, r2, #3\n \tmovs\tr4, r1\n-\tadds\tr4, r6, #2\n+\tadds\tr4, r7, #2\n \tmovs\tr4, r1\n-\tadds\tr2, r0, #2\n+\tadds\tr2, r1, #2\n \tmovs\tr4, r1\n-\tadds\tr4, r1, #2\n+\tadds\tr4, r2, #2\n \tmovs\tr4, r1\n-\tadds\tr2, r6, #1\n+\tadds\tr2, r7, #1\n \tmovs\tr4, r1\n-\tadds\tr2, r1, #4\n+\tadds\tr2, r2, #4\n \tmovs\tr4, r1\n-\tsubs\tr6, r5, r5\n+\tsubs\tr6, r6, r5\n \tmovs\tr4, r1\n \tstrh\tr0, [r6, r6]\n \tmovs\tr5, r2\n-\tsubs\tr4, r1, r2\n+\tsubs\tr4, r2, r2\n \tmovs\tr4, r1\n \tstrh\tr2, [r7, r5]\n \tmovs\tr5, r2\n-\tsubs\tr0, r5, r1\n+\tsubs\tr0, r6, r1\n \tmovs\tr4, r1\n \tstrh\tr2, [r6, r4]\n \tmovs\tr5, r2\n-\tsubs\tr6, r4, r0\n+\tsubs\tr6, r5, r0\n \tmovs\tr4, r1\n \tstrh\tr6, [r2, r4]\n \tmovs\tr5, r2\n-\tadds\tr4, r7, r7\n+\tsubs\tr4, r0, r0\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadds\tr2, r7, r3\n+\tadds\tr2, r0, r4\n \tmovs\tr4, r1\n-\tadds\tr0, r3, r4\n+\tadds\tr0, r4, r4\n \tmovs\tr4, r1\n-\tadds\tr0, r2, r4\n+\tadds\tr0, r3, r4\n \tmovs\tr4, r1\n-\tlsrs\tr4, r0, #5\n+\tlsrs\tr4, r1, #5\n \tmovs\tr2, r1\n-\tadds\tr0, r2, r5\n+\tadds\tr0, r3, r5\n \tmovs\tr4, r1\n-\tlsrs\tr6, r2, #4\n+\tlsrs\tr6, r3, #4\n \tmovs\tr2, r1\n void MIRAParameters::multiParamPrint_(std::vector >&, std::vector > const&, std::ostream&, bool&, char const*, char const*, int, unsigned char):\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr1, [pc, #1640]\t@ 3583dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ba5a8>\n \tmov\tr5, r2\n@@ -1733963,69 +1733963,69 @@\n \tblx\tbd88 \n \tstr\tr0, [r4, r7]\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r7, r6]\n \tmovs\tr5, r2\n-\tldmia\tr6!, {r4, r7}\n+\tldmia\tr6!, {r3, r4, r7}\n \tmovs\tr1, r1\n-\tasrs\tr4, r2, #29\n+\tasrs\tr4, r3, #29\n \tmovs\tr4, r1\n-\tasrs\tr0, r6, #26\n+\tasrs\tr0, r7, #26\n \tmovs\tr4, r1\n \tldr\tr7, [pc, #560]\t@ (358628 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ba7f4>)\n \tmovs\tr5, r2\n-\tasrs\tr0, r2, #24\n+\tasrs\tr0, r3, #24\n \tmovs\tr4, r1\n-\tasrs\tr6, r6, #23\n+\tasrs\tr6, r7, #23\n \tmovs\tr4, r1\n-\tasrs\tr4, r3, #23\n+\tasrs\tr4, r4, #23\n \tmovs\tr4, r1\n-\tasrs\tr2, r0, #23\n+\tasrs\tr2, r1, #23\n \tmovs\tr4, r1\n-\tasrs\tr0, r2, #22\n+\tasrs\tr0, r3, #22\n \tmovs\tr4, r1\n-\tasrs\tr2, r3, #22\n+\tasrs\tr2, r4, #22\n \tmovs\tr4, r1\n-\tasrs\tr0, r0, #22\n+\tasrs\tr0, r1, #22\n \tmovs\tr4, r1\n-\tasrs\tr0, r3, #24\n+\tasrs\tr0, r4, #24\n \tmovs\tr4, r1\n-\tasrs\tr2, r0, #18\n+\tasrs\tr2, r1, #18\n \tmovs\tr4, r1\n \tldr\tr4, [pc, #784]\t@ (358730 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ba8fc>)\n \tmovs\tr5, r2\n-\tasrs\tr0, r4, #14\n+\tasrs\tr0, r5, #14\n \tmovs\tr4, r1\n \tldr\tr4, [pc, #568]\t@ (358660 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ba82c>)\n \tmovs\tr5, r2\n-\tasrs\tr4, r7, #13\n+\tasrs\tr4, r0, #14\n \tmovs\tr4, r1\n \tldr\tr4, [pc, #280]\t@ (358548 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ba714>)\n \tmovs\tr5, r2\n-\tasrs\tr2, r7, #12\n+\tasrs\tr2, r0, #13\n \tmovs\tr4, r1\n \tldr\tr4, [pc, #168]\t@ (3584e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ba6ac>)\n \tmovs\tr5, r2\n-\tasrs\tr0, r2, #12\n+\tasrs\tr0, r3, #12\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tasrs\tr6, r1, #8\n+\tasrs\tr6, r2, #8\n \tmovs\tr4, r1\n-\tasrs\tr4, r5, #8\n+\tasrs\tr4, r6, #8\n \tmovs\tr4, r1\n-\tasrs\tr4, r4, #8\n+\tasrs\tr4, r5, #8\n \tmovs\tr4, r1\n-\tlsls\tr0, r3, #9\n+\tlsls\tr0, r4, #9\n \tmovs\tr2, r1\n-\tasrs\tr4, r4, #9\n+\tasrs\tr4, r5, #9\n \tmovs\tr4, r1\n-\tlsls\tr2, r5, #8\n+\tlsls\tr2, r6, #8\n \tmovs\tr2, r1\n void MIRAParameters::multiParamPrint_, std::allocator > >(std::vector >&, std::vector > const&, std::ostream&, std::__cxx11::basic_string, std::allocator >&, char const*, char const*, int, unsigned char):\n ./src/mira/../../src/mira/parameters.H:132\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr.w\tr1, [pc, #1664]\t@ 358ae0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bacac>\n \tmov\tr5, r2\n@@ -1734846,68 +1734846,68 @@\n \tblx\tbd88 \n \tldr\tr2, [pc, #976]\t@ (358eb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bb080>)\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr2, [pc, #832]\t@ (358e2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1baff8>)\n \tmovs\tr5, r2\n-\tstmia\tr7!, {r2, r5, r7}\n+\tstmia\tr7!, {r2, r3, r5, r7}\n \tmovs\tr1, r1\n-\tasrs\tr0, r5, #1\n+\tasrs\tr0, r6, #1\n \tmovs\tr4, r1\n-\tlsrs\tr4, r0, #31\n+\tlsrs\tr4, r1, #31\n \tmovs\tr4, r1\n \tldr\tr0, [pc, #616]\t@ (358d64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1baf30>)\n \tmovs\tr5, r2\n-\tlsrs\tr6, r3, #28\n+\tlsrs\tr6, r4, #28\n \tmovs\tr4, r1\n-\tlsrs\tr2, r0, #28\n+\tlsrs\tr2, r1, #28\n \tmovs\tr4, r1\n-\tlsrs\tr6, r4, #27\n+\tlsrs\tr6, r5, #27\n \tmovs\tr4, r1\n-\tlsrs\tr4, r1, #27\n+\tlsrs\tr4, r2, #27\n \tmovs\tr4, r1\n-\tlsrs\tr2, r3, #26\n+\tlsrs\tr2, r4, #26\n \tmovs\tr4, r1\n-\tlsrs\tr4, r4, #26\n+\tlsrs\tr4, r5, #26\n \tmovs\tr4, r1\n-\tlsrs\tr2, r1, #26\n+\tlsrs\tr2, r2, #26\n \tmovs\tr4, r1\n-\tlsrs\tr2, r4, #28\n+\tlsrs\tr2, r5, #28\n \tmovs\tr4, r1\n-\tlsrs\tr6, r0, #22\n+\tlsrs\tr6, r1, #22\n \tmovs\tr4, r1\n \tcmp\tr8, r8\n \tmovs\tr5, r2\n-\tlsrs\tr4, r3, #18\n+\tlsrs\tr4, r4, #18\n \tmovs\tr4, r1\n \tcmp\tsl, r1\n \tmovs\tr5, r2\n-\tlsrs\tr0, r7, #17\n+\tlsrs\tr0, r0, #18\n \tmovs\tr4, r1\n \tcmp\tr2, r8\n \tmovs\tr5, r2\n-\tlsrs\tr6, r6, #16\n+\tlsrs\tr6, r7, #16\n \tmovs\tr4, r1\n \tcmp\tr6, r4\n \tmovs\tr5, r2\n-\tlsrs\tr4, r1, #16\n+\tlsrs\tr4, r2, #16\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsrs\tr2, r1, #12\n+\tlsrs\tr2, r2, #12\n \tmovs\tr4, r1\n-\tlsrs\tr0, r5, #12\n+\tlsrs\tr0, r6, #12\n \tmovs\tr4, r1\n-\tlsrs\tr0, r4, #12\n+\tlsrs\tr0, r5, #12\n \tmovs\tr4, r1\n-\tsmmla\tr0, r4, r9, r0\n-\tlsrs\tr0, r4, #13\n+\tsmmla\tr0, ip, r9, r0\n+\tlsrs\tr0, r5, #13\n \tmovs\tr4, r1\n-\tsmlad\tr0, r6, r9, r0\n+\tsmlad\tr0, lr, r9, r0\n void std::vector >::emplace_back(unsigned int&&):\n /usr/include/c++/10/bits/vector.tcc:112\n \tldrd\tr3, r2, [r0, #4]\n /usr/include/c++/10/bits/vector.tcc:109\n \tmov\tip, r0\n /usr/include/c++/10/bits/vector.tcc:112\n \tcmp\tr3, r2\n@@ -1735601,15 +1735601,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:570\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n /usr/include/c++/10/bits/vector.tcc:663\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tlsls\tr2, r3, #20\n+\tlsls\tr6, r4, #20\n \tmovs\tr1, r1\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n PlacedContigReads::shiftReads(int, int) [clone .part.0]:\n ./src/mira/pcrcontainer.C:608\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr5, r2\n@@ -1738450,17 +1738450,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr0, [r0, #76]\t@ 0x4c\n+\tstr\tr0, [r1, #76]\t@ 0x4c\n \tmovs\tr4, r1\n-\tstr\tr6, [r6, #72]\t@ 0x48\n+\tstr\tr6, [r7, #72]\t@ 0x48\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tcmp\tr0, #108\t@ 0x6c\n \tmovs\tr5, r2\n@@ -1739738,96 +1739738,96 @@\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr7, #94\t@ 0x5e\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [r4, #56]\t@ 0x38\n+\tstr\tr4, [r5, #56]\t@ 0x38\n \tmovs\tr4, r1\n-\tstr\tr2, [r1, #56]\t@ 0x38\n+\tstr\tr2, [r2, #56]\t@ 0x38\n \tmovs\tr4, r1\n-\tstr\tr2, [r2, #52]\t@ 0x34\n+\tstr\tr2, [r3, #52]\t@ 0x34\n \tmovs\tr4, r1\n-\tstr\tr4, [r1, #48]\t@ 0x30\n+\tstr\tr4, [r2, #48]\t@ 0x30\n \tmovs\tr4, r1\n-\tadds\tr7, #24\n+\tadds\tr7, #32\n \tmovs\tr2, r1\n-\tstr\tr0, [r1, #40]\t@ 0x28\n+\tstr\tr0, [r2, #40]\t@ 0x28\n \tmovs\tr4, r1\n-\tstrb\tr6, [r5, #4]\n+\tstrb\tr6, [r6, #4]\n \tmovs\tr2, r1\n-\tstr\tr0, [r1, #36]\t@ 0x24\n+\tstr\tr0, [r2, #36]\t@ 0x24\n \tmovs\tr4, r1\n-\tstr\tr6, [r1, #36]\t@ 0x24\n+\tstr\tr6, [r2, #36]\t@ 0x24\n \tmovs\tr4, r1\n-\tb.n\t35b3b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bd580>\n+\tb.n\t35b3c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bd590>\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr4, [r1, #20]\n+\tstr\tr4, [r2, #20]\n \tmovs\tr4, r1\n-\tstr\tr6, [r1, #20]\n+\tstr\tr6, [r2, #20]\n \tmovs\tr4, r1\n-\tstr\tr4, [r2, #20]\n+\tstr\tr4, [r3, #20]\n \tmovs\tr4, r1\n-\tcbnz\tr0, 35b208 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bd3d4>\n+\tcbnz\tr0, 35b20a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bd3d6>\n \tmovs\tr3, r1\n-\tstr\tr4, [r7, #8]\n+\tstr\tr4, [r0, #12]\n \tmovs\tr4, r1\n-\tstr\tr2, [r0, #12]\n+\tstr\tr2, [r1, #12]\n \tmovs\tr4, r1\n-\tstr\tr0, [r1, #12]\n+\tstr\tr0, [r2, #12]\n \tmovs\tr4, r1\n-\tldrsh\tr4, [r4, r7]\n+\tldrsh\tr4, [r5, r7]\n \tmovs\tr4, r1\n-\tldrsh\tr2, [r5, r7]\n+\tldrsh\tr2, [r6, r7]\n \tmovs\tr4, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstr\tr6, [r1, #0]\n+\tstr\tr6, [r2, #0]\n \tmovs\tr4, r1\n-\tstr\tr0, [r0, #0]\n+\tstr\tr0, [r1, #0]\n \tmovs\tr4, r1\n-\tldrsh\tr6, [r4, r7]\n+\tldrsh\tr6, [r5, r7]\n \tmovs\tr4, r1\n-\tldrsh\tr4, [r2, r3]\n+\tldrsh\tr4, [r3, r3]\n \tmovs\tr4, r1\n-\t\t\t@ instruction: 0xb6ec\n+\t\t\t@ instruction: 0xb6f4\n \tmovs\tr3, r1\n \tmovs\tr1, #144\t@ 0x90\n \tmovs\tr5, r2\n-\tldrb\tr2, [r7, r6]\n+\tldrb\tr2, [r0, r7]\n \tmovs\tr4, r1\n-\tldrsh\tr0, [r1, r0]\n+\tldrsh\tr0, [r2, r0]\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t35acb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bce7c>\n+\tb.n\t35acc8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bce94>\n \tmovs\tr0, r1\n-\tb.n\t35acac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bce78>\n+\tb.n\t35acc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bce90>\n \tmovs\tr0, r1\n-\tsmmls\tr0, lr, sl, r0\n+\tusada8\tr0, r6, sl, r0\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\trevsh\tr6, r5\n+\trevsh\tr2, r7\n \tmovs\tr0, r1\n-\trevsh\tr0, r5\n+\trevsh\tr4, r6\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #112\t@ 0x70\n \tldr\tr4, [pc, #496]\t@ (35b464 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bd630>)\n \tmov\tr0, r8\n@@ -1740090,17 +1740090,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr4, [r4, r5]\n+\tldr\tr4, [r5, r5]\n \tmovs\tr4, r1\n-\tldr\tr0, [r3, r5]\n+\tldr\tr0, [r4, r5]\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -1740535,39 +1740535,39 @@\n \t...\n \tsubs\tr4, r0, r3\n \tmovs\tr5, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr0, r0, r3\n \tmovs\tr5, r2\n-\tstrh\tr4, [r6, #58]\t@ 0x3a\n+\tstrh\tr4, [r7, #58]\t@ 0x3a\n \tmovs\tr4, r1\n-\tcmp\tr0, #144\t@ 0x90\n+\tcmp\tr0, #152\t@ 0x98\n \tmovs\tr2, r1\n-\tldrsb\tr6, [r2, r7]\n+\tldrsb\tr6, [r3, r7]\n \tmovs\tr4, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tadds\tr4, r7, r5\n \tmovs\tr5, r2\n-\tldrsb\tr0, [r0, r5]\n+\tldrsb\tr0, [r1, r5]\n \tmovs\tr4, r1\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpush\t{r3, r4, r5, lr}\n+\tpush\t{r2, r6, lr}\n \tmovs\tr0, r1\n-\tpush\t{r1, r2, r4, r5, lr}\n+\tpush\t{r1, r6, lr}\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1740967,21 +1740967,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr2, [r6, r4]\n+\tstrh\tr2, [r7, r4]\n \tmovs\tr4, r1\n-\tstrh\tr6, [r4, r4]\n+\tstrh\tr6, [r5, r4]\n \tmovs\tr4, r1\n-\tstrh\tr0, [r5, r4]\n+\tstrh\tr0, [r6, r4]\n \tmovs\tr4, r1\n-\tstrh\tr6, [r1, r4]\n+\tstrh\tr6, [r2, r4]\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n PlacedContigReads::removeRead(PlacedContigReads::const_iterator):\n ./src/mira/pcrcontainer.C:756\n@@ -1742294,27 +1742294,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #104]\t@ (35c678 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be844>)\n+\tldr\tr2, [pc, #136]\t@ (35c698 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be864>)\n \tmovs\tr4, r1\n-\tldr\tr1, [pc, #1016]\t@ (35ca0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bebd8>)\n+\tldr\tr2, [pc, #24]\t@ (35c62c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be7f8>)\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #336]\t@ (35c770 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be93c>)\n+\tldr\tr1, [pc, #368]\t@ (35c790 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be95c>)\n \tmovs\tr4, r1\n-\tbeq.n\t35c6f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be8c0>\n+\tbeq.n\t35c70c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be8d8>\n \tmovs\tr0, r1\n-\tb.n\t35c378 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be544>\n+\tb.n\t35c388 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1be554>\n \tmovs\tr2, r1\n \tlsrs\tr0, r4, #25\n \tmovs\tr0, r0\n PlacedContigReads::splitBin(unsigned int):\n ./src/mira/pcrcontainer.C:298\n \tldr.w\tr2, [pc, #1296]\t@ 35cb40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bed0c>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1743035,41 +1743035,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #3\n \tmovs\tr5, r2\n \tlsls\tr4, r4, #26\n \tmovs\tr5, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tcmp\tlr, r5\n+\tcmp\tlr, r6\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmvns\tr4, r1\n+\tmvns\tr4, r2\n \tmovs\tr4, r1\n-\tmvns\tr4, r0\n+\tmvns\tr4, r1\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tmvns\tr0, r0\n+\tmvns\tr0, r1\n \tmovs\tr4, r1\n-\tmvns\tr4, r4\n+\tmvns\tr4, r5\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr0, r4, r5\n+\tadds\tr4, r5, r5\n \tmovs\tr1, r1\n PlacedContigReads::placeRead_helper(int, int, signed char, int, unsigned int&):\n ./src/mira/pcrcontainer.C:454\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n \tldr\tr5, [pc, #756]\t@ (35ce88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bf054>)\n \tsub\tsp, #52\t@ 0x34\n@@ -1743911,17 +1743911,17 @@\n \tmov\tr0, r8\n \tblx\tb538 \n /usr/include/c++/10/bits/alloc_traits.h:492\n \tb.n\t35d22e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bf3fa>\n /usr/include/c++/10/bits/stl_vector.h:350\n \tb.n\t35d22e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bf3fa>\n \tnop\n-\tasrs\tr6, r4, #8\n+\tasrs\tr2, r6, #8\n \tmovs\tr1, r1\n-\tasrs\tr6, r3, #8\n+\tasrs\tr2, r5, #8\n \tmovs\tr1, r1\n PlacedContigReads::placeRead(Read const&, int, int, signed char):\n ./src/mira/pcrcontainer.C:381\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #2040]\t@ 35da48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bfc14>\n \tldr.w\tr4, [pc, #2040]\t@ 35da4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bfc18>\n \tsub\tsp, #300\t@ 0x12c\n@@ -1744891,29 +1744891,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr6, #6\n+\tadds\tr6, #14\n \tmovs\tr4, r1\n-\tb.n\t35d2dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bf4a8>\n+\tb.n\t35d2ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bf4b8>\n \tmovs\tr2, r1\n-\tadds\tr5, #210\t@ 0xd2\n+\tadds\tr5, #218\t@ 0xda\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsvc\t32\n+\tsvc\t40\t@ 0x28\n \tmovs\tr1, r1\n-\tadds\tr5, #86\t@ 0x56\n+\tadds\tr5, #94\t@ 0x5e\n \tmovs\tr4, r1\n-\tadds\tr4, #212\t@ 0xd4\n+\tadds\tr4, #220\t@ 0xdc\n \tmovs\tr4, r1\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr9, sp, #152\t@ 0x98\n /usr/include/c++/10/ostream:391\n \tldr.w\tr8, [pc, #828]\t@ 35ddd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bff9c>\n /usr/include/c++/10/bits/basic_ios.h:462\n \tmov\tr0, r9\n@@ -1745308,19 +1745308,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcbnz\tr0, 35de1a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bffe6>\n-\tmovs\tr0, r1\n \tcbnz\tr4, 35de1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bffe8>\n \tmovs\tr0, r1\n-\tbeq.n\t35ddf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bffc4>\n+\tcbnz\tr0, 35de20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bffec>\n+\tmovs\tr0, r1\n+\tbeq.n\t35de08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1bffd4>\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1746347,19 +1746347,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr7, sp, #744\t@ 0x2e8\n+\tadd\tr7, sp, #792\t@ 0x318\n \tmovs\tr0, r1\n-\tadd\tr7, sp, #728\t@ 0x2d8\n+\tadd\tr7, sp, #776\t@ 0x308\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r2, r4, r5, r6, r7}\n+\tstmia\tr5!, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1746933,15 +1746933,15 @@\n \tblx\tb6dc \n \tnop\n \tldrd\tr0, r0, [r4], #-80\t@ 0x50\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t35ea18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c0be4>\n \tmovs\tr4, r2\n-\tadd\tr1, sp, #304\t@ 0x130\n+\tadd\tr1, sp, #352\t@ 0x160\n \tmovs\tr0, r1\n std::pair > >, bool> std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::_M_emplace_unique > >(std::pair >&&):\n /usr/include/c++/10/bits/stl_tree.h:2411\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tmov\tr4, r2\n \tmov\tsl, r0\n@@ -1747420,15 +1747420,15 @@\n \tadd.w\tr5, r7, #8\n \tstmia.w\tr9, {r0, r1}\n \tb.n\t35ee74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1040>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (35efcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1198>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldrb\tr6, [r3, #17]\n+\tldrb\tr2, [r5, #17]\n \tmovs\tr0, r1\n std::vector >::_M_fill_insert(__gnu_cxx::__normal_iterator > >, unsigned int, PlacedContigReads::addoff_t const&):\n /usr/include/c++/10/bits/vector.tcc:509\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r1\n \tldr.w\tr4, [pc, #2140]\t@ 35f834 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1a00>\n \tsub\tsp, #52\t@ 0x34\n@@ -1748360,15 +1748360,15 @@\n \tblx\tb6dc \n \tsvc\t128\t@ 0x80\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tble.n\t35f8c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1a90>\n \tmovs\tr4, r2\n-\tldr\tr5, [sp, #248]\t@ 0xf8\n+\tldr\tr5, [sp, #296]\t@ 0x128\n \tmovs\tr0, r1\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, PlacedContigReads::addoff_t&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4026531840\t@ 0xf0000000\n \tldrd\tr7, r8, [r0]\n@@ -1748561,15 +1748561,15 @@\n \tadd.w\tr5, r7, #8\n \tstmia.w\tr9, {r0, r1}\n \tb.n\t35f8c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1a90>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (35fa1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1be8>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrb\tr6, [r1, #8]\n+\tstrb\tr2, [r3, #8]\n \tmovs\tr0, r1\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, PlacedContigReads::ancillaryinfo_t&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr2, #43691\t@ 0xaaab\n@@ -1748790,15 +1748790,15 @@\n \tstmia.w\tsl, {r0, r1, r2}\n \tb.n\t35fac0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1c8c>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (35fc68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1e34>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldr\tr4, [r0, #124]\t@ 0x7c\n+\tldr\tr0, [r2, #124]\t@ 0x7c\n \tmovs\tr0, r1\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, PlacedContigReads::offsettile_t&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4026531840\t@ 0xf0000000\n \tldrd\tr7, r8, [r0]\n@@ -1748991,15 +1748991,15 @@\n \tadd.w\tr5, r7, #8\n \tstmia.w\tr9, {r0, r1}\n \tb.n\t35fcec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c1eb8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (35fe44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c2010>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr6, [r4, #92]\t@ 0x5c\n+\tldr\tr2, [r6, #92]\t@ 0x5c\n \tmovs\tr0, r1\n void std::__adjust_heap<__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >, int, std::pair > > >, __gnu_cxx::__ops::_Iter_comp_iter > > > > > >(__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >, int, int, std::pair > > >, __gnu_cxx::__ops::_Iter_comp_iter > > > > >):\n /usr/include/c++/10/bits/stl_heap.h:223\n \tsub\tsp, #8\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/stl_heap.h:228\n \tsubs\tr7, r2, #1\n@@ -1749999,21 +1749999,21 @@\n \tmovs\tr0, r0\n \tldmia\tr3, {r2, r3, r5, r6, r7}\n \tmovs\tr4, r2\n \tldmia\tr3!, {r2, r6, r7}\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr0, r6, #14\n+\tlsrs\tr0, r7, #14\n \tmovs\tr4, r1\n-\tadd\tr4, pc, #912\t@ (adr r4, 36084c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c2a18>)\n+\tadd\tr4, pc, #944\t@ (adr r4, 36086c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c2a38>)\n \tmovs\tr3, r1\n-\tlsrs\tr6, r6, #13\n+\tlsrs\tr6, r7, #13\n \tmovs\tr4, r1\n-\tldrh\tr6, [r6, r6]\n+\tldrh\tr6, [r7, r6]\n \tmovs\tr1, r1\n \tldmia\tr2, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n PPathfinder::priv_gnsi_helper():\n ./src/mira/ppathfinder.C:1039\n@@ -1750701,29 +1750701,29 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmia\tr0!, {r2, r3, r6}\n \tmovs\tr4, r2\n \tldmia\tr0!, {r1, r4, r5}\n \tmovs\tr4, r2\n-\tlsls\tr4, r0, #31\n+\tlsls\tr4, r1, #31\n \tmovs\tr4, r1\n-\tlsls\tr6, r4, #30\n+\tlsls\tr6, r5, #30\n \tmovs\tr4, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr6, r3, #31\n+\tlsls\tr6, r4, #31\n \tmovs\tr4, r1\n-\tstrh\tr2, [r0, #54]\t@ 0x36\n+\tstrh\tr2, [r1, #54]\t@ 0x36\n \tmovs\tr1, r1\n-\tlsls\tr2, r2, #31\n+\tlsls\tr2, r3, #31\n \tmovs\tr4, r1\n-\tlsls\tr4, r0, #28\n+\tlsls\tr4, r1, #28\n \tmovs\tr4, r1\n PPathfinder::priv_findNextBackboneOverlapQuick(PPathfinder::nextreadtoadd_t&, bool, bool, bool):\n ./src/mira/ppathfinder.C:2373\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n \tldr.w\tr4, [pc, #1884]\t@ 3610a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c326c>\n \tldr.w\tr0, [pc, #1884]\t@ 3610a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c3270>\n@@ -1751874,39 +1751874,39 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r2, #54]\t@ 0x36\n+\tstrh\tr0, [r4, #54]\t@ 0x36\n \tmovs\tr0, r1\n-\tstrh\tr0, [r2, #54]\t@ 0x36\n+\tstrh\tr4, [r3, #54]\t@ 0x36\n \tmovs\tr0, r1\n-\tldr\tr5, [sp, #64]\t@ 0x40\n+\tldr\tr5, [sp, #96]\t@ 0x60\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr4, [r0, #46]\t@ 0x2e\n+\tstrh\tr0, [r2, #46]\t@ 0x2e\n \tmovs\tr0, r1\n-\tstrh\tr0, [r7, #44]\t@ 0x2c\n+\tstrh\tr4, [r0, #46]\t@ 0x2e\n \tmovs\tr0, r1\n-\tadd\tr5, sp, #536\t@ 0x218\n+\tadd\tr5, sp, #568\t@ 0x238\n \tmovs\tr2, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tlsls\tr0, r1, #1\n+\tlsls\tr0, r2, #1\n \tmovs\tr4, r1\n-\tmovs\tr6, r7\n+\tlsls\tr6, r0, #1\n \tmovs\tr4, r1\n-\tmovs\tr4, r5\n+\tmovs\tr4, r6\n \tmovs\tr4, r1\n ./src/mira/ppathfinder.C:2441\n \tldr.w\tr2, [r8]\n \tldrb.w\tr4, [r2, sl]\n \tcmp\tr4, #0\n \tbne.w\t360cb6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c2e82>\n \tb.n\t360c14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c2de0>\n@@ -1752277,31 +1752277,31 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n std::__cxx11::basic_string, std::allocator >::_M_destroy(unsigned int):\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t361322 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c34ee>\n \tnop\n-\tstrh\tr0, [r4, #30]\n+\tstrh\tr4, [r5, #30]\n \tmovs\tr0, r1\n-\tstrh\tr4, [r3, #30]\n+\tstrh\tr0, [r5, #30]\n \tmovs\tr0, r1\n-\tldr\tr2, [sp, #112]\t@ 0x70\n+\tldr\tr2, [sp, #144]\t@ 0x90\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr4, [r6, #26]\n+\tstrh\tr0, [r0, #28]\n \tmovs\tr0, r1\n-\tstrh\tr0, [r5, #26]\n+\tstrh\tr4, [r6, #26]\n \tmovs\tr0, r1\n-\tadd\tr3, sp, #216\t@ 0xd8\n+\tadd\tr3, sp, #248\t@ 0xf8\n \tmovs\tr2, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n PPathfinder::priv_ppFillNoRept():\n ./src/mira/ppathfinder.C:149\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n@@ -1754635,15 +1754635,15 @@\n \tb.n\t362136 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c4302>\n \tpush\t{r1, r2}\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcbz\tr0, 3621b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c437c>\n \tmovs\tr4, r2\n-\tstmia\tr4!, {r1, r3, r5}\n+\tstmia\tr4!, {r1, r2, r4, r5}\n \tmovs\tr0, r1\n PPathfinder::resyncContig():\n ./src/mira/ppathfinder.C:269\n \tldr.w\tr2, [pc, #1208]\t@ 362658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c4824>\n \tldr.w\tr3, [pc, #1208]\t@ 36265c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c4828>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1755415,26 +1755415,26 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldc\t0, cr0, [lr, #44]\t@ 0x2c\n-\tstcl\t0, cr0, [lr, #-44]\t@ 0xffffffd4\n+\tstc\t0, cr0, [r6, #44]!\t@ 0x2c\n+\tldcl\t0, cr0, [r6, #-44]\t@ 0xffffffd4\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tadd\tr2, sp, #600\t@ 0x258\n \tmovs\tr4, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\trsbs\tr0, r4, fp\n-\trsb\tr0, sl, fp\n+\trsbs\tr0, ip, fp\n+\trsbs\tr0, r2, fp\n \tb.n\t362610 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c47dc>\n std::__cxx11::basic_string, std::allocator >::_M_data() const:\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr0, [sp, #32]\n std::__cxx11::basic_string, std::allocator >::_M_dispose():\n /usr/include/c++/10/bits/basic_string.h:231\n \tadd.w\tlr, sp, #40\t@ 0x28\n@@ -1755690,15 +1755690,15 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr0, sp, #568\t@ 0x238\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbics.w\tr0, r8, fp\n+\torr.w\tr0, r0, fp\n \tadd\tr7, pc, #752\t@ (adr r7, 362b0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c4cd8>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n PPathfinder::priv_initialiseLowerBoundOEdges():\n ./src/mira/ppathfinder.C:463\n \tldr.w\tr3, [r0, #632]\t@ 0x278\n@@ -1757000,15 +1757000,15 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr3, pc, #480\t@ (adr r3, 36333c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c5508>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tb.n\t362c04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c4dd0>\n+\tb.n\t362c14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c4de0>\n \tmovs\tr3, r1\n \tadd\tr2, pc, #648\t@ (adr r2, 3633f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c55bc>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n@@ -1757016,19 +1757016,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr4, [r3, #84]\t@ 0x54\n+\tstr\tr0, [r5, #84]\t@ 0x54\n \tmovs\tr0, r1\n-\tstr\tr0, [r3, #84]\t@ 0x54\n+\tstr\tr4, [r4, #84]\t@ 0x54\n \tmovs\tr0, r1\n-\tldrb\tr0, [r3, #14]\n+\tldrb\tr0, [r4, #14]\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1758305,51 +1758305,51 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr0, [r7, #8]\n+\tstr\tr4, [r0, #12]\n \tmovs\tr0, r1\n-\tstr\tr2, [r6, #8]\n+\tstr\tr6, [r7, #8]\n \tmovs\tr0, r1\n-\tstrb\tr0, [r6, #27]\n+\tstrb\tr0, [r7, #27]\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsh\tr0, [r5, r6]\n+\tldrsh\tr4, [r6, r6]\n \tmovs\tr0, r1\n-\tldrsh\tr2, [r3, r6]\n+\tldrsh\tr6, [r4, r6]\n \tmovs\tr0, r1\n-\tstrh\tr4, [r4, #58]\t@ 0x3a\n+\tstrh\tr4, [r5, #58]\t@ 0x3a\n \tmovs\tr2, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tldrb\tr0, [r7, r7]\n+\tldrsh\tr4, [r0, r0]\n \tmovs\tr0, r1\n-\tldrb\tr4, [r6, r7]\n+\tldrsh\tr0, [r0, r0]\n \tmovs\tr0, r1\n-\tstrb\tr4, [r6, #16]\n+\tstrb\tr4, [r7, #16]\n \tmovs\tr2, r1\n-\tldrb\tr6, [r5, r3]\n+\tldrb\tr2, [r7, r3]\n \tmovs\tr0, r1\n-\tldrb\tr2, [r4, r3]\n+\tldrb\tr6, [r5, r3]\n \tmovs\tr0, r1\n-\tstrh\tr2, [r6, #36]\t@ 0x24\n+\tstrh\tr2, [r7, #36]\t@ 0x24\n \tmovs\tr2, r1\n-\tldrb\tr2, [r2, r0]\n+\tldrb\tr6, [r3, r0]\n \tmovs\tr0, r1\n-\tldrb\tr6, [r1, r0]\n+\tldrb\tr2, [r3, r0]\n \tmovs\tr0, r1\n-\tstrb\tr6, [r1, #9]\n+\tstrb\tr6, [r2, #9]\n \tmovs\tr2, r1\n ReadGroupLib::checkLibExistence(unsigned char):\n ./src/mira/../../src/mira/readgrouplib.H:270\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tmov\tr0, r6\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n@@ -1760399,39 +1760399,39 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [sp, #400]\t@ 0x190\n \tmovs\tr4, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr7, [pc, #560]\t@ (3649d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6b9c>)\n+\tldr\tr7, [pc, #608]\t@ (364a00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6bcc>)\n \tmovs\tr0, r1\n-\tldr\tr7, [pc, #544]\t@ (3649c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6b90>)\n+\tldr\tr7, [pc, #592]\t@ (3649f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6bc0>)\n \tmovs\tr0, r1\n-\tstr\tr0, [r1, #92]\t@ 0x5c\n+\tstr\tr0, [r2, #92]\t@ 0x5c\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #944]\t@ (364b68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6d34>)\n+\tldr\tr6, [pc, #992]\t@ (364b98 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6d64>)\n \tmovs\tr0, r1\n-\tldr\tr6, [pc, #896]\t@ (364b3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6d08>)\n+\tldr\tr6, [pc, #944]\t@ (364b6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6d38>)\n \tmovs\tr0, r1\n-\tstrb\tr0, [r6, #26]\n+\tstrb\tr0, [r7, #26]\n \tmovs\tr2, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tldr\tr5, [pc, #1000]\t@ (364bb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6d7c>)\n+\tldr\tr6, [pc, #24]\t@ (3647e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c69ac>)\n \tmovs\tr0, r1\n-\tldr\tr5, [pc, #984]\t@ (364ba4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c6d70>)\n+\tldr\tr6, [pc, #8]\t@ (3647d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c69a0>)\n \tmovs\tr0, r1\n-\tstr\tr6, [r6, #64]\t@ 0x40\n+\tstr\tr6, [r7, #64]\t@ 0x40\n \tmovs\tr2, r1\n ReadGroupLib::checkLibExistence(unsigned char):\n ./src/mira/../../src/mira/readgrouplib.H:270\n \tadd\tr4, sp, #52\t@ 0x34\n \tmov\tfp, r0\n \tmov\tr0, r4\n \tbl\t36061c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c27e8>\n@@ -1762178,81 +1762178,81 @@\n \tb.n\t365254 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7420>\n \tb.n\t365264 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7430>\n \tb.n\t365254 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7420>\n \tb.n\t365264 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7430>\n \tb.n\t3651ce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c739a>\n \tb.n\t36523a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7406>\n \tb.n\t3651ce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c739a>\n-\tldr\tr5, [pc, #280]\t@ (36539c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7568>)\n+\tldr\tr5, [pc, #328]\t@ (3653cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7598>)\n \tmovs\tr0, r1\n-\tldr\tr5, [pc, #224]\t@ (365368 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7534>)\n+\tldr\tr5, [pc, #272]\t@ (365398 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7564>)\n \tmovs\tr0, r1\n-\tstrb\tr6, [r0, #20]\n+\tstrb\tr6, [r1, #20]\n \tmovs\tr2, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #448]\t@ (36545c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7628>)\n+\tldr\tr4, [pc, #496]\t@ (36548c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7658>)\n \tmovs\tr0, r1\n-\tldr\tr4, [pc, #424]\t@ (365448 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7614>)\n+\tldr\tr4, [pc, #472]\t@ (365478 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7644>)\n \tmovs\tr0, r1\n-\tstr\tr0, [r5, #40]\t@ 0x28\n+\tstr\tr0, [r6, #40]\t@ 0x28\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr3, [pc, #1008]\t@ (36569c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7868>)\n+\tldr\tr4, [pc, #32]\t@ (3652cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7498>)\n \tmovs\tr0, r1\n-\tldr\tr3, [pc, #952]\t@ (365668 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7834>)\n+\tldr\tr3, [pc, #1000]\t@ (365698 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7864>)\n \tmovs\tr0, r1\n-\tstrb\tr4, [r7, #14]\n+\tstrb\tr4, [r0, #15]\n \tmovs\tr2, r1\n-\tldr\tr1, [pc, #320]\t@ (3653f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c75c4>)\n+\tldr\tr1, [pc, #368]\t@ (365428 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c75f4>)\n \tmovs\tr0, r1\n-\tldr\tr1, [pc, #296]\t@ (3653e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c75b0>)\n+\tldr\tr1, [pc, #344]\t@ (365414 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c75e0>)\n \tmovs\tr0, r1\n-\tldrsh\tr0, [r1, r6]\n+\tldrsh\tr0, [r2, r6]\n \tmovs\tr2, r1\n-\tldr\tr0, [pc, #816]\t@ (3655f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c77c0>)\n+\tldr\tr0, [pc, #864]\t@ (365624 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c77f0>)\n \tmovs\tr0, r1\n-\tldr\tr0, [pc, #760]\t@ (3655c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c778c>)\n+\tldr\tr0, [pc, #808]\t@ (3655f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c77bc>)\n \tmovs\tr0, r1\n-\tstrb\tr4, [r1, #2]\n+\tstrb\tr4, [r2, #2]\n \tmovs\tr2, r1\n-\tblx\tr4\n+\tblxns\tr5\n \tmovs\tr0, r1\n-\t\t\t@ instruction: 0x479a\n+\t\t\t@ instruction: 0x47a6\n \tmovs\tr0, r1\n-\tldrb\tr0, [r3, r7]\n+\tldrb\tr0, [r4, r7]\n \tmovs\tr2, r1\n-\tmov\tsl, sp\n+\tmov\tlr, lr\n \tmovs\tr0, r1\n-\tmov\tip, fp\n+\tmov\tr8, sp\n \tmovs\tr0, r1\n-\tldr\tr2, [r5, #104]\t@ 0x68\n+\tldr\tr2, [r6, #104]\t@ 0x68\n \tmovs\tr2, r1\n-\tcmp\tip, lr\n+\tmov\tr0, r0\n \tmovs\tr0, r1\n-\tcmp\tr8, sp\n+\tcmp\tip, lr\n \tmovs\tr0, r1\n-\tldr\tr0, [r7, #88]\t@ 0x58\n+\tldr\tr0, [r0, #92]\t@ 0x5c\n \tmovs\tr2, r1\n-\tcmp\tr4, r4\n+\tcmp\tr0, r6\n \tmovs\tr0, r1\n-\tcmp\tr0, r4\n+\tcmp\tr4, r5\n \tmovs\tr0, r1\n-\tldrh\tr0, [r4, r5]\n+\tldrh\tr0, [r5, r5]\n \tmovs\tr2, r1\n-\tadd\tsl, r1\n+\tadd\tlr, r2\n \tmovs\tr0, r1\n-\tadd\tlr, r0\n+\tadd\tsl, r2\n \tmovs\tr0, r1\n-\tldrh\tr6, [r0, r3]\n+\tldrh\tr6, [r1, r3]\n \tmovs\tr2, r1\n \tldrb\tr4, [r7, #24]\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n PPathfinder::priv_fdns_g_subFillCache(bool, bool, bool, bool, bool):\n ./src/mira/ppathfinder.C:646\n@@ -1763542,59 +1763542,59 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrb\tr6, [r0, #16]\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tpop\t{r2, r4, r5, r6, pc}\n+\tpop\t{r2, r3, r4, r5, r6, pc}\n \tmovs\tr3, r1\n-\tb.n\t365968 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7b34>\n+\tb.n\t365978 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7b44>\n \tmovs\tr3, r1\n-\tb.n\t365940 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7b0c>\n+\tb.n\t365950 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7b1c>\n \tmovs\tr3, r1\n-\tb.n\t365918 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7ae4>\n+\tb.n\t365928 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7af4>\n \tmovs\tr3, r1\n-\tldr\tr3, [pc, #912]\t@ (365e20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7fec>)\n+\tldr\tr3, [pc, #944]\t@ (365e40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c800c>)\n \tmovs\tr3, r1\n-\tpop\t{r5, pc}\n+\tpop\t{r3, r5, pc}\n \tmovs\tr3, r1\n \tldrb\tr0, [r7, #6]\n \tmovs\tr4, r2\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr6, #130\t@ 0x82\n+\tsubs\tr6, #142\t@ 0x8e\n \tmovs\tr0, r1\n-\tsubs\tr6, #124\t@ 0x7c\n+\tsubs\tr6, #136\t@ 0x88\n \tmovs\tr0, r1\n-\tstrb\tr2, [r7, r2]\n+\tstrb\tr2, [r0, r3]\n \tmovs\tr2, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tcbnz\tr2, 365acc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7c98>\n+\tcbnz\tr2, 365ace , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c7c9a>\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xb826\n+\t\t\t@ instruction: 0xb82e\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xb83c\n+\t\t\t@ instruction: 0xb844\n \tmovs\tr3, r1\n-\tldrh\tr2, [r2, #0]\n+\tldrh\tr6, [r3, #0]\n \tmovs\tr0, r1\n PPathfinder::priv_fdns_e_subFillCache(bool, unsigned char):\n ./src/mira/ppathfinder.C:849\n \tldr.w\tr2, [pc, #1232]\t@ 365fac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8178>\n \tldr.w\tr3, [pc, #1232]\t@ 365fb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c817c>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -1764471,29 +1764471,29 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr6, [r7, #16]\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tpush\t{r2, r3, r4, r5, r6, lr}\n+\tpush\t{r2, r7, lr}\n \tmovs\tr3, r1\n-\tudf\t#228\t@ 0xe4\n+\tudf\t#236\t@ 0xec\n \tmovs\tr3, r1\n-\tstrb\tr0, [r0, #17]\n+\tstrb\tr0, [r1, #17]\n \tmovs\tr1, r1\n-\tpush\t{r1, r6, r7}\n+\tpush\t{r1, r3, r6, r7}\n \tmovs\tr3, r1\n \tstrb\tr2, [r4, #5]\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tcbz\tr2, 36603e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c820a>\n+\tcbz\tr2, 366040 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c820c>\n \tmovs\tr3, r1\n-\tcbz\tr4, 36601e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c81ea>\n+\tcbz\tr4, 366020 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c81ec>\n \tmovs\tr3, r1\n PPathfinder::priv_fdns_e_subFillCache(bool, unsigned char):\n ./src/mira/ppathfinder.C:850\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r2\n \tldr.w\tr2, [pc, #1240]\t@ 3664bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8688>\n \tvpush\t{d8}\n@@ -1765375,29 +1765375,29 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr4, [r3, #116]\t@ 0x74\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tsp, #424\t@ 0x1a8\n+\tadd\tsp, #456\t@ 0x1c8\n \tmovs\tr3, r1\n-\tbls.n\t366478 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8644>\n+\tbls.n\t366488 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8654>\n \tmovs\tr3, r1\n-\tldr\tr6, [r5, #112]\t@ 0x70\n+\tldr\tr6, [r6, #112]\t@ 0x70\n \tmovs\tr1, r1\n-\tadd\tr7, sp, #704\t@ 0x2c0\n+\tadd\tr7, sp, #736\t@ 0x2e0\n \tmovs\tr3, r1\n \tldr\tr0, [r2, #68]\t@ 0x44\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #544\t@ 0x220\n+\tadd\tr6, sp, #576\t@ 0x240\n \tmovs\tr3, r1\n-\tadd\tr5, sp, #1000\t@ 0x3e8\n+\tadd\tr6, sp, #8\n \tmovs\tr3, r1\n PPathfinder::priv_iridnq_est(int):\n ./src/mira/ppathfinder.C:1392\n \tldr.w\tr2, [pc, #1948]\t@ 366c8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8e58>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr4, [pc, #1944]\t@ 366c90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8e5c>\n@@ -1766568,40 +1766568,40 @@\n \tmovs\tr0, r0\n \tldr\tr4, [r7, #32]\n \tmovs\tr4, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tldr\tr6, [r0, #0]\n \tmovs\tr4, r2\n-\tadd\tr3, sp, #80\t@ 0x50\n+\tadd\tr3, sp, #112\t@ 0x70\n \tmovs\tr3, r1\n-\tadd\tr7, pc, #320\t@ (adr r7, 366de8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8fb4>)\n+\tadd\tr7, pc, #352\t@ (adr r7, 366e08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c8fd4>)\n \tmovs\tr3, r1\n-\tadd\tr2, sp, #896\t@ 0x380\n+\tadd\tr2, sp, #928\t@ 0x3a0\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr2, sp, #224\t@ 0xe0\n+\tadd\tr2, sp, #256\t@ 0x100\n \tmovs\tr3, r1\n-\tadd\tr2, sp, #416\t@ 0x1a0\n+\tadd\tr2, sp, #448\t@ 0x1c0\n \tmovs\tr3, r1\n-\tstrb\tr0, [r7, r0]\n+\tstrb\tr0, [r0, r1]\n \tmovs\tr2, r1\n-\tadd\tr1, sp, #936\t@ 0x3a8\n+\tadd\tr1, sp, #968\t@ 0x3c8\n \tmovs\tr3, r1\n-\tadd\tr1, sp, #624\t@ 0x270\n+\tadd\tr1, sp, #656\t@ 0x290\n \tmovs\tr3, r1\n-\tstrd\tr0, r0, [r0, #40]!\t@ 0x28\n+\tstrd\tr0, r0, [r8, #40]!\t@ 0x28\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tadd\tr1, sp, #704\t@ 0x2c0\n+\tadd\tr1, sp, #736\t@ 0x2e0\n \tmovs\tr3, r1\n-\tadd\tr1, sp, #240\t@ 0xf0\n+\tadd\tr1, sp, #272\t@ 0x110\n \tmovs\tr3, r1\n PPathfinder::priv_iridnq_genome(int):\n ./src/mira/ppathfinder.C:1094\n \tldr.w\tr2, [pc, #1840]\t@ 36740c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c95d8>\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr.w\tr4, [pc, #1836]\t@ 367410 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c95dc>\n@@ -1767660,41 +1767660,41 @@\n \tmovs\tr0, r0\n \tstr\tr4, [r4, #36]\t@ 0x24\n \tmovs\tr4, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tstr\tr2, [r7, #0]\n \tmovs\tr4, r2\n-\tadd\tr2, pc, #808\t@ (adr r2, 36774c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9918>)\n+\tadd\tr2, pc, #840\t@ (adr r2, 36776c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9938>)\n \tmovs\tr3, r1\n-\tldr\tr7, [sp, #32]\n+\tldr\tr7, [sp, #64]\t@ 0x40\n \tmovs\tr3, r1\n-\tadd\tr2, pc, #984\t@ (adr r2, 367804 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c99d0>)\n+\tadd\tr2, pc, #1016\t@ (adr r2, 367824 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c99f0>)\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #336\t@ (adr r2, 367588 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9754>)\n+\tadd\tr2, pc, #368\t@ (adr r2, 3675a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9774>)\n \tmovs\tr3, r1\n-\tadd\tr2, pc, #528\t@ (adr r2, 36764c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9818>)\n+\tadd\tr2, pc, #560\t@ (adr r2, 36766c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9838>)\n \tmovs\tr3, r1\n-\tldr\tr4, [pc, #336]\t@ (367590 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c975c>)\n+\tldr\tr4, [pc, #368]\t@ (3675b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c977c>)\n \tmovs\tr2, r1\n-\tadd\tr2, pc, #392\t@ (adr r2, 3675cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9798>)\n+\tadd\tr2, pc, #424\t@ (adr r2, 3675ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c97b8>)\n \tmovs\tr3, r1\n-\tadd\tr1, pc, #728\t@ (adr r1, 367720 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c98ec>)\n+\tadd\tr1, pc, #760\t@ (adr r1, 367740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c990c>)\n \tmovs\tr3, r1\n-\tb.n\t367840 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9a0c>\n+\tb.n\t367850 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9a1c>\n \tmovs\tr2, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #800\t@ (adr r1, 367774 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9940>)\n+\tadd\tr1, pc, #832\t@ (adr r1, 367794 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c9960>)\n \tmovs\tr3, r1\n-\tadd\tr1, pc, #712\t@ (adr r1, 367720 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c98ec>)\n+\tadd\tr1, pc, #744\t@ (adr r1, 367740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1c990c>)\n \tmovs\tr3, r1\n PPathfinder::prepareForNewContig(Contig&):\n ./src/mira/ppathfinder.C:222\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd.w\tr3, r0, #16\n \tmov\tr4, r0\n \tadd.w\tr7, r0, #592\t@ 0x250\n@@ -1768447,17 +1768447,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #568]\t@ 0x238\n+\tldr\tr2, [sp, #600]\t@ 0x258\n \tmovs\tr3, r1\n-\tldr\tr4, [sp, #456]\t@ 0x1c8\n+\tldr\tr4, [sp, #488]\t@ 0x1e8\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n@@ -1769280,19 +1769280,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr6, [sp, #896]\t@ 0x380\n+\tstr\tr6, [sp, #928]\t@ 0x3a0\n \tmovs\tr3, r1\n-\titt\tmi\n+\tite\tmi\n \tmovmi\tr3, r1\n-\tstrmi\tr6, [sp, #600]\t@ 0x258\n+\tstrpl\tr6, [sp, #632]\t@ 0x278\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -1770940,41 +1770940,41 @@\n \tmovs\tr0, r0\n \tldr\tr5, [pc, #720]\t@ (368b50 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cad1c>)\n \tmovs\tr4, r2\n \tldr\tr5, [pc, #656]\t@ (368b14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cace0>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #384]\t@ 0x180\n+\tstr\tr1, [sp, #416]\t@ 0x1a0\n \tmovs\tr3, r1\n-\tstr\tr1, [sp, #304]\t@ 0x130\n+\tstr\tr1, [sp, #336]\t@ 0x150\n \tmovs\tr3, r1\n-\tstr\tr1, [sp, #136]\t@ 0x88\n+\tstr\tr1, [sp, #168]\t@ 0xa8\n \tmovs\tr3, r1\n \tldr\tr3, [pc, #272]\t@ (3689a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cab74>)\n \tmovs\tr4, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrh\tr2, [r6, #56]\t@ 0x38\n+\tldrh\tr2, [r7, #56]\t@ 0x38\n \tmovs\tr3, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr6, [r4, #48]\t@ 0x30\n+\tldrh\tr6, [r5, #48]\t@ 0x30\n \tmovs\tr3, r1\n-\t\t\t@ instruction: 0xb626\n+\t\t\t@ instruction: 0xb62e\n \tmovs\tr3, r1\n-\tldrh\tr4, [r5, #46]\t@ 0x2e\n+\tldrh\tr4, [r6, #46]\t@ 0x2e\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n std::ctype::widen(char) const:\n /usr/include/c++/10/bits/locale_facets.h:876\n@@ -1771797,33 +1771797,33 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr6, r1\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr2, [r3, #20]\n+\tldrh\tr2, [r4, #20]\n \tmovs\tr3, r1\n \torrs\tr2, r5\n \tmovs\tr4, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr6, [r5, #0]\n+\tldrh\tr6, [r6, #0]\n \tmovs\tr3, r1\n-\tldrh\tr4, [r5, #0]\n+\tldrh\tr4, [r6, #0]\n \tmovs\tr3, r1\n-\tldrh\tr6, [r1, #0]\n+\tldrh\tr6, [r2, #0]\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -1772071,29 +1772071,29 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t368fb2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cb17e>\n std::__cxx11::basic_string, std::allocator >::_M_data() const:\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t368fc4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cb190>\n \tb.n\t368fce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cb19a>\n \tnop\n-\tstrh\tr2, [r3, #54]\t@ 0x36\n+\tstrh\tr2, [r4, #54]\t@ 0x36\n \tmovs\tr3, r1\n-\tstrh\tr4, [r4, #50]\t@ 0x32\n+\tstrh\tr4, [r5, #50]\t@ 0x32\n \tmovs\tr3, r1\n-\tstrh\tr6, [r0, #50]\t@ 0x32\n+\tstrh\tr6, [r1, #50]\t@ 0x32\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr4, [r3, #48]\t@ 0x30\n+\tstrh\tr4, [r4, #48]\t@ 0x30\n \tmovs\tr3, r1\n-\tstrh\tr4, [r2, #48]\t@ 0x30\n+\tstrh\tr4, [r3, #48]\t@ 0x30\n \tmovs\tr3, r1\n-\tstrh\tr6, [r7, #44]\t@ 0x2c\n+\tstrh\tr6, [r0, #46]\t@ 0x2e\n \tmovs\tr3, r1\n void std::__introsort_loop<__gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__normal_iterator > >, int, __gnu_cxx::__ops::_Iter_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1945\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r3\n __gnu_cxx::__normal_iterator > >::difference_type __gnu_cxx::operator- > >(__gnu_cxx::__normal_iterator > > const&, __gnu_cxx::__normal_iterator > > const&):\n /usr/include/c++/10/bits/stl_iterator.h:1205\n@@ -1773227,17 +1773227,17 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr0, #250\t@ 0xfa\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr4, [r4, #27]\n+\tldrb\tr4, [r5, #27]\n \tmovs\tr3, r1\n-\tvhadd.s32\td0, d0, d8\n+\tvhadd.s32\td0, d8, d8\n \tsubs\tr0, #122\t@ 0x7a\n \tmovs\tr4, r2\n \tlsls\tr4, r5, #27\n \tmovs\tr0, r0\n PPathfinder::priv_fdns_genome():\n ./src/mira/ppathfinder.C:540\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -1773572,17 +1773572,17 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr6, #104\t@ 0x68\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr0, [r0, #18]\n+\tldrb\tr0, [r1, #18]\n \tmovs\tr3, r1\n-\tldc\t0, cr0, [sl], {8}\n+\tstc\t0, cr0, [r2], #32\n \tadds\tr5, #244\t@ 0xf4\n \tmovs\tr4, r2\n \tlsls\tr4, r5, #27\n \tmovs\tr0, r0\n PPathfinder::priv_getNextStartID():\n ./src/mira/ppathfinder.C:1017\n \tldr\tr2, [pc, #804]\t@ (369e80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cc04c>)\n@@ -1775389,62 +1775389,62 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr0, #174\t@ 0xae\n \tmovs\tr4, r2\n \tcmp\tr5, #158\t@ 0x9e\n \tmovs\tr4, r2\n-\tstrb\tr4, [r1, #16]\n+\tstrb\tr4, [r2, #16]\n \tmovs\tr3, r1\n-\tstrb\tr4, [r5, #16]\n+\tstrb\tr4, [r6, #16]\n \tmovs\tr3, r1\n-\tstrb\tr4, [r7, #11]\n+\tstrb\tr4, [r0, #12]\n \tmovs\tr3, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr6, [r3, #13]\n+\tstrb\tr6, [r4, #13]\n \tmovs\tr3, r1\n-\tstrb\tr0, [r1, #10]\n-\tmovs\tr3, r1\n-\tstrb\tr6, [r1, #10]\n+\tstrb\tr0, [r2, #10]\n \tmovs\tr3, r1\n-\tstrb\tr0, [r1, #10]\n+\tstrb\tr6, [r2, #10]\n \tmovs\tr3, r1\n-\tstrb\tr6, [r7, #7]\n+\tstrb\tr0, [r2, #10]\n \tmovs\tr3, r1\n-\tstrb\tr0, [r2, #11]\n+\tstrb\tr6, [r0, #8]\n \tmovs\tr3, r1\n-\tstrb\tr6, [r2, #11]\n+\tstrb\tr0, [r3, #11]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r6, #5]\n+\tstrb\tr6, [r3, #11]\n \tmovs\tr3, r1\n-\tstrb\tr0, [r1, #5]\n+\tstrb\tr2, [r7, #5]\n \tmovs\tr3, r1\n-\tstrb\tr4, [r1, #5]\n+\tstrb\tr0, [r2, #5]\n \tmovs\tr3, r1\n-\tsbc.w\tr0, sl, #9\n-\tstrb\tr4, [r2, #3]\n+\tstrb\tr4, [r2, #5]\n \tmovs\tr3, r1\n-\tstrb\tr2, [r2, #4]\n+\tsbcs.w\tr0, r2, #9\n+\tstrb\tr4, [r3, #3]\n \tmovs\tr3, r1\n \tstrb\tr2, [r3, #4]\n \tmovs\tr3, r1\n+\tstrb\tr2, [r4, #4]\n+\tmovs\tr3, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstrb\tr4, [r7, #0]\n+\tstrb\tr4, [r0, #1]\n \tmovs\tr3, r1\n-\tldr\tr0, [r3, #124]\t@ 0x7c\n+\tldr\tr0, [r4, #124]\t@ 0x7c\n \tmovs\tr3, r1\n-\tstr\tr6, [sp, #152]\t@ 0x98\n+\tstr\tr6, [sp, #184]\t@ 0xb8\n \tmovs\tr3, r1\n-\tstr\tr6, [sp, #48]\t@ 0x30\n+\tstr\tr6, [sp, #80]\t@ 0x50\n \tmovs\tr3, r1\n-\tldr\tr0, [r3, #120]\t@ 0x78\n+\tldr\tr0, [r4, #120]\t@ 0x78\n \tmovs\tr3, r1\n PPathfinder::beststartinfo_t::ltclustersize(PPathfinder::beststartinfo_t const&, PPathfinder::beststartinfo_t const&):\n ./src/mira/../../src/mira/ppathfinder.H:56\n \tldr\tr0, [r0, #0]\n \tldr\tr3, [r1, #0]\n ./src/mira/../../src/mira/ppathfinder.H:57\n \tcmp\tr0, r3\n@@ -1776452,15 +1776452,15 @@\n \tnop\n \tmovs\tr5, #208\t@ 0xd0\n \tmovs\tr4, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr4, #78\t@ 0x4e\n \tmovs\tr4, r2\n-\tb.n\t36ac2c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ccdf8>\n+\tb.n\t36ac44 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cce10>\n \tmovs\tr7, r0\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, PPathfinder::beststartinfo_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n std::vector >::size() const:\n /usr/include/c++/10/bits/stl_vector.h:919\n \tmovw\tr3, #43691\t@ 0xaaab\n@@ -1776605,15 +1776605,15 @@\n \tmovw\tr4, #65528\t@ 0xfff8\n \tmovt\tr4, #32767\t@ 0x7fff\n \tb.n\t36af9e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd16a>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (36afc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd18c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tpop\t{r1, r3, r5, r6}\n+\tpop\t{r1, r2, r4, r5, r6}\n \tmovs\tr7, r0\n void std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > >::_M_realloc_insert<__gnu_cxx::__normal_iterator > > const&>(__gnu_cxx::__normal_iterator<__gnu_cxx::__normal_iterator > >*, std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > > >, __gnu_cxx::__normal_iterator > > const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1758\n@@ -1776807,15 +1776807,15 @@\n \tb.n\t36b038 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd204>\n std::vector<__gnu_cxx::__normal_iterator > >, std::allocator<__gnu_cxx::__normal_iterator > > > >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (36b120 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd2ec>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tcbnz\tr4, 36b166 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd332>\n+\tcbnz\tr0, 36b16a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd336>\n \tmovs\tr7, r0\n void std::deque >::_M_push_back_aux(int const&):\n /usr/include/c++/10/bits/deque.tcc:481\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr6, r1\n std::operator-(std::_Deque_iterator const&, std::_Deque_iterator const&):\n /usr/include/c++/10/bits/stl_deque.h:356\n@@ -1777014,15 +1777014,15 @@\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #8]\t@ (36b23c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd408>)\n \tadd\tr0, pc\n \tblx\tb6dc \n __gnu_cxx::new_allocator::allocate(unsigned int, void const*):\n /usr/include/c++/10/ext/new_allocator.h:106\n \tblx\tb0c8 \n-\tpop\t{r1, r3, r4, pc}\n+\tpop\t{r1, r2, r5, pc}\n \tmovs\tr7, r0\n void std::vector > > >, std::allocator > > > > >::_M_realloc_insert > > > >(__gnu_cxx::__normal_iterator > > >*, std::vector > > >, std::allocator > > > > > >, std::pair > > >&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n std::vector > > >, std::allocator > > > > >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4026531840\t@ 0xf0000000\n@@ -1777298,15 +1777298,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t36b2c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd48c>\n std::vector > > >, std::allocator > > > > >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (36b418 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd5e4>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\t\t\t@ instruction: 0xb812\n+\t\t\t@ instruction: 0xb81e\n \tmovs\tr7, r0\n void std::deque >, std::allocator > > >::_M_push_back_aux > >(std::vector >&&):\n /usr/include/c++/10/bits/deque.tcc:481\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr5, r1\n std::operator-(std::_Deque_iterator >, std::vector >&, std::vector >*> const&, std::_Deque_iterator >, std::vector >&, std::vector >*> const&):\n /usr/include/c++/10/bits/stl_deque.h:356\n@@ -1777522,15 +1777522,15 @@\n /usr/include/c++/10/bits/deque.tcc:490\n \tldr\tr0, [pc, #8]\t@ (36b554 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd720>)\n \tadd\tr0, pc\n \tblx\tb6dc \n __gnu_cxx::new_allocator >*>::allocate(unsigned int, void const*):\n /usr/include/c++/10/ext/new_allocator.h:106\n \tblx\tb0c8 \n-\trev\tr2, r0\n+\trev\tr6, r1\n \tmovs\tr7, r0\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tldr\tr2, [pc, #100]\t@ (36b5c0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd78c>)\n \tldr\tr3, [pc, #104]\t@ (36b5c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cd790>)\n \tpush\t{r4, r5, r6, r7, lr}\n \tadd\tr2, pc\n@@ -1778593,15 +1778593,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t36baba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cdc86>\n std::vector, std::allocator > >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (36bc14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1cdde0>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tadd\tsp, #88\t@ 0x58\n+\tadd\tsp, #136\t@ 0x88\n \tmovs\tr7, r0\n void std::__push_heap<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse > >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tsub\tsp, #8\n /usr/include/c++/10/bits/stl_heap.h:139\n \tcmp\tr1, r2\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -1802829,15 +1802829,15 @@\n \tstr\tr4, [r1, #48]\t@ 0x30\n \tmovs\tr3, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r0, #36]\t@ 0x24\n \tmovs\tr3, r2\n \tvaddl.s16\tq0, d12, d6\n-\tldc2l\t0, cr0, [r4, #24]\n+\tstc2l\t0, cr0, [r0, #24]!\n StringContainer::StringContainer(char const*):\n ./src/mira/../../src/mira/stringcontainer.H:103\n \tmov\tr3, r1\n \tldr\tr1, [pc, #268]\t@ (376fcc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d9198>)\n \tldr\tr2, [pc, #268]\t@ (376fd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d919c>)\n \tadd\tr1, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -1804822,17 +1804822,17 @@\n \tmovs\tr0, r0\n \tldr\tr4, [r3, r4]\n \tmovs\tr3, r2\n \tlsrs\tr4, r5, #7\n \tmovs\tr0, r0\n \tldr\tr4, [r7, r1]\n \tmovs\tr3, r2\n-\tadd\tr4, pc, #776\t@ (adr r4, 377ed0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da09c>)\n+\tadd\tr4, pc, #808\t@ (adr r4, 377ef0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da0bc>)\n \tmovs\tr2, r1\n-\tadd\tr4, pc, #464\t@ (adr r4, 377d9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d9f68>)\n+\tadd\tr4, pc, #496\t@ (adr r4, 377dbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1d9f88>)\n \tmovs\tr2, r1\n \tlsrs\tr4, r7, #10\n \tmovs\tr0, r0\n \tb.n\t3780b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da27c>\n \tmovs\tr6, r0\n ReadGroupLib::getStrainIDOfStrain(std::__cxx11::basic_string, std::allocator > const&, int&):\n ./src/mira/readgrouplib.C:473\n@@ -1805721,96 +1805721,96 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tstr\tr0, [r3, r7]\n \tmovs\tr3, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr6, [sp, #584]\t@ 0x248\n+\tldr\tr6, [sp, #616]\t@ 0x268\n \tmovs\tr2, r1\n-\tldr\tr6, [sp, #544]\t@ 0x220\n+\tldr\tr6, [sp, #576]\t@ 0x240\n \tmovs\tr2, r1\n-\tldr\tr6, [sp, #600]\t@ 0x258\n+\tldr\tr6, [sp, #632]\t@ 0x278\n \tmovs\tr2, r1\n-\tsmlad\tr0, r2, r9, r0\n+\tsmlad\tr0, sl, r9, r0\n \tstr\tr4, [r2, r4]\n \tmovs\tr3, r2\n-\tldr\tr5, [sp, #800]\t@ 0x320\n+\tldr\tr5, [sp, #832]\t@ 0x340\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #592]\t@ 0x250\n+\tldr\tr5, [sp, #624]\t@ 0x270\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #600]\t@ 0x258\n+\tldr\tr5, [sp, #632]\t@ 0x278\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #608]\t@ 0x260\n+\tldr\tr5, [sp, #640]\t@ 0x280\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #632]\t@ 0x278\n+\tldr\tr5, [sp, #664]\t@ 0x298\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #672]\t@ 0x2a0\n+\tldr\tr5, [sp, #704]\t@ 0x2c0\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #648]\t@ 0x288\n+\tldr\tr5, [sp, #680]\t@ 0x2a8\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #624]\t@ 0x270\n+\tldr\tr5, [sp, #656]\t@ 0x290\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #600]\t@ 0x258\n+\tldr\tr5, [sp, #632]\t@ 0x278\n \tmovs\tr2, r1\n-\tlsrs\tr2, r6, #14\n+\tlsrs\tr6, r7, #14\n \tmovs\tr7, r0\n-\tlsrs\tr2, r5, #14\n+\tlsrs\tr6, r6, #14\n \tmovs\tr7, r0\n-\tlsrs\tr2, r4, #14\n+\tlsrs\tr6, r5, #14\n \tmovs\tr7, r0\n-\tlsrs\tr2, r3, #14\n+\tlsrs\tr6, r4, #14\n \tmovs\tr7, r0\n-\tldr\tr5, [sp, #320]\t@ 0x140\n-\tmovs\tr2, r1\n-\tldr\tr5, [sp, #344]\t@ 0x158\n-\tmovs\tr2, r1\n \tldr\tr5, [sp, #352]\t@ 0x160\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #392]\t@ 0x188\n+\tldr\tr5, [sp, #376]\t@ 0x178\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #400]\t@ 0x190\n+\tldr\tr5, [sp, #384]\t@ 0x180\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #440]\t@ 0x1b8\n+\tldr\tr5, [sp, #424]\t@ 0x1a8\n \tmovs\tr2, r1\n \tldr\tr5, [sp, #432]\t@ 0x1b0\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #408]\t@ 0x198\n+\tldr\tr5, [sp, #472]\t@ 0x1d8\n \tmovs\tr2, r1\n-\tldr\tr4, [sp, #416]\t@ 0x1a0\n+\tldr\tr5, [sp, #464]\t@ 0x1d0\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #312]\t@ 0x138\n+\tldr\tr5, [sp, #440]\t@ 0x1b8\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #272]\t@ 0x110\n+\tldr\tr4, [sp, #448]\t@ 0x1c0\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #280]\t@ 0x118\n+\tldr\tr5, [sp, #344]\t@ 0x158\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #288]\t@ 0x120\n+\tldr\tr5, [sp, #304]\t@ 0x130\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #328]\t@ 0x148\n+\tldr\tr5, [sp, #312]\t@ 0x138\n \tmovs\tr2, r1\n \tldr\tr5, [sp, #320]\t@ 0x140\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #280]\t@ 0x118\n+\tldr\tr5, [sp, #360]\t@ 0x168\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #256]\t@ 0x100\n+\tldr\tr5, [sp, #352]\t@ 0x160\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #232]\t@ 0xe8\n+\tldr\tr5, [sp, #312]\t@ 0x138\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #208]\t@ 0xd0\n+\tldr\tr5, [sp, #288]\t@ 0x120\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #200]\t@ 0xc8\n+\tldr\tr5, [sp, #264]\t@ 0x108\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #160]\t@ 0xa0\n+\tldr\tr5, [sp, #240]\t@ 0xf0\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #136]\t@ 0x88\n+\tldr\tr5, [sp, #232]\t@ 0xe8\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #112]\t@ 0x70\n+\tldr\tr5, [sp, #192]\t@ 0xc0\n \tmovs\tr2, r1\n-\tldr\tr3, [sp, #584]\t@ 0x248\n+\tldr\tr5, [sp, #168]\t@ 0xa8\n+\tmovs\tr2, r1\n+\tldr\tr5, [sp, #144]\t@ 0x90\n+\tmovs\tr2, r1\n+\tldr\tr3, [sp, #616]\t@ 0x268\n \tmovs\tr2, r1\n ReadGroupLib::parseSegmentNaming(std::__cxx11::basic_string, std::allocator > const&, unsigned char&):\n ./src/mira/readgrouplib.C:752\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr2, r1\n \tldr\tr4, [pc, #600]\t@ (378404 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da5d0>)\n \tsub\tsp, #44\t@ 0x2c\n@@ -1806252,33 +1806252,33 @@\n __gnu_cxx::new_allocator::~new_allocator():\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldr\tr5, [pc, #704]\t@ (3786c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da894>)\n \tmovs\tr3, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #1008]\t@ 0x3f0\n+\tldr\tr3, [sp, #16]\n \tmovs\tr2, r1\n \tldr\tr4, [pc, #384]\t@ (378594 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da760>)\n \tmovs\tr3, r2\n-\tldr\tr2, [sp, #784]\t@ 0x310\n+\tldr\tr2, [sp, #816]\t@ 0x330\n \tmovs\tr2, r1\n-\tldr\tr2, [sp, #592]\t@ 0x250\n+\tldr\tr2, [sp, #624]\t@ 0x270\n \tmovs\tr2, r1\n-\tldr\tr2, [sp, #528]\t@ 0x210\n+\tldr\tr2, [sp, #560]\t@ 0x230\n \tmovs\tr2, r1\n-\tmovs\tr0, #120\t@ 0x78\n+\tmovs\tr0, #128\t@ 0x80\n \tmovs\tr0, r1\n-\tldr\tr2, [sp, #368]\t@ 0x170\n+\tldr\tr2, [sp, #400]\t@ 0x190\n \tmovs\tr2, r1\n-\tbcc.n\t3783c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da590>\n+\tbcc.n\t3783d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da5a0>\n \tmovs\tr0, r1\n \tbge.n\t3784a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da66c>\n \tmovs\tr6, r0\n-\tsmmls\tr0, r2, r8, r0\n+\tsmmls\tr0, sl, r8, r0\n ReadGroupLib::hasLibWithSeqType(unsigned char):\n ./src/mira/readgrouplib.C:793\n \tldr\tr3, [pc, #268]\t@ (378544 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da710>)\n std::vector >::size() const:\n /usr/include/c++/10/bits/stl_vector.h:919\n \tldr\tr2, [pc, #272]\t@ (378548 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1da714>)\n ReadGroupLib::hasLibWithSeqType(unsigned char):\n@@ -1807083,35 +1807083,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #32]\n+\tstr\tr5, [sp, #64]\t@ 0x40\n \tmovs\tr0, r1\n-\tldrb\tr4, [r4, #7]\n+\tldrb\tr4, [r5, #7]\n \tmovs\tr0, r1\n-\tstr\tr6, [sp, #608]\t@ 0x260\n+\tstr\tr6, [sp, #640]\t@ 0x280\n \tmovs\tr2, r1\n-\tstr\tr6, [sp, #616]\t@ 0x268\n+\tstr\tr6, [sp, #648]\t@ 0x288\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #888]\t@ 0x378\n+\tstr\tr3, [sp, #920]\t@ 0x398\n \tmovs\tr0, r1\n-\tldrb\tr2, [r7, #2]\n+\tldrb\tr2, [r0, #3]\n \tmovs\tr0, r1\n-\tstr\tr5, [sp, #784]\t@ 0x310\n-\tmovs\tr2, r1\n \tstr\tr5, [sp, #816]\t@ 0x330\n \tmovs\tr2, r1\n-\tstr\tr5, [sp, #344]\t@ 0x158\n+\tstr\tr5, [sp, #848]\t@ 0x350\n+\tmovs\tr2, r1\n+\tstr\tr5, [sp, #376]\t@ 0x178\n \tmovs\tr2, r1\n ReadGroupLib::fillInSensibleDefaults(unsigned char):\n ./src/mira/readgrouplib.C:176\n \tldr\tr1, [pc, #684]\t@ (378c6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dae38>)\n \tldr\tr2, [pc, #688]\t@ (378c70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dae3c>)\n \tadd\tr1, pc\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -1807547,38 +1807547,38 @@\n \tmovs\tr3, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tip, r2\n \tmovs\tr3, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #672]\t@ 0x2a0\n+\tldr\tr3, [sp, #704]\t@ 0x2c0\n \tmovs\tr2, r1\n-\tstr\tr5, [sp, #128]\t@ 0x80\n+\tstr\tr5, [sp, #160]\t@ 0xa0\n \tmovs\tr2, r1\n \tadd\tip, r9\n \tmovs\tr3, r2\n-\tstr\tr4, [sp, #776]\t@ 0x308\n+\tstr\tr4, [sp, #808]\t@ 0x328\n \tmovs\tr2, r1\n-\tstr\tr3, [sp, #656]\t@ 0x290\n+\tstr\tr3, [sp, #688]\t@ 0x2b0\n \tmovs\tr2, r1\n-\tstr\tr3, [sp, #632]\t@ 0x278\n+\tstr\tr3, [sp, #664]\t@ 0x298\n \tmovs\tr2, r1\n-\tstr\tr4, [sp, #152]\t@ 0x98\n+\tstr\tr4, [sp, #184]\t@ 0xb8\n \tmovs\tr2, r1\n-\tstr\tr3, [sp, #632]\t@ 0x278\n+\tstr\tr3, [sp, #664]\t@ 0x298\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr.w\tr0, [r2, #9]\n-\tstr\tr2, [sp, #808]\t@ 0x328\n+\tldr.w\tr0, [sl, #9]\n+\tstr\tr2, [sp, #840]\t@ 0x348\n \tmovs\tr2, r1\n-\tstr\tr3, [sp, #128]\t@ 0x80\n+\tstr\tr3, [sp, #160]\t@ 0xa0\n \tmovs\tr2, r1\n ReadGroupLib::completeDefaultsForReadGroups():\n ./src/mira/readgrouplib.C:302\n \tldr\tr3, [pc, #52]\t@ (378ce8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1daeb4>)\n std::vector >::size() const:\n /usr/include/c++/10/bits/stl_vector.h:919\n \tldr\tr2, [pc, #56]\t@ (378cec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1daeb8>)\n@@ -1807910,19 +1807910,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr1, [sp, #720]\t@ 0x2d0\n+\tstr\tr1, [sp, #752]\t@ 0x2f0\n \tmovs\tr2, r1\n-\tlsrs\tr2, r0, #2\n+\tlsrs\tr2, r1, #2\n \tmovs\tr1, r1\n-\tstr\tr1, [sp, #656]\t@ 0x290\n+\tstr\tr1, [sp, #688]\t@ 0x2b0\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::getShortNameOfSequencingType[abi:cxx11](unsigned int):\n ./src/mira/readgrouplib.C:371\n@@ -1808216,19 +1808216,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr6, [r7, #60]\t@ 0x3c\n+\tldrh\tr6, [r0, #62]\t@ 0x3e\n \tmovs\tr2, r1\n-\tlsls\tr4, r1, #26\n+\tlsls\tr4, r2, #26\n \tmovs\tr1, r1\n-\tldrh\tr6, [r6, #62]\t@ 0x3e\n+\tldrh\tr6, [r7, #62]\t@ 0x3e\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::getSAMNameOfSequencingType[abi:cxx11](unsigned int):\n ./src/mira/readgrouplib.C:379\n@@ -1808523,19 +1808523,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r0, #46]\t@ 0x2e\n+\tldrh\tr2, [r1, #46]\t@ 0x2e\n \tmovs\tr2, r1\n-\tlsls\tr0, r2, #18\n+\tlsls\tr0, r3, #18\n \tmovs\tr1, r1\n-\tldrh\tr6, [r0, #50]\t@ 0x32\n+\tldrh\tr6, [r1, #50]\t@ 0x32\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::getStrainOfStrainID[abi:cxx11](int):\n ./src/mira/readgrouplib.C:482\n@@ -1808938,17 +1808938,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr0, [r3, #30]\n+\tldrh\tr0, [r4, #30]\n \tmovs\tr2, r1\n-\tldrh\tr6, [r7, #28]\n+\tldrh\tr6, [r0, #30]\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tsubs\tr2, #48\t@ 0x30\n \tmovs\tr3, r2\n@@ -1809430,45 +1809430,45 @@\n \tmovs\tr3, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr1, #102\t@ 0x66\n \tmovs\tr3, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrh\tr6, [r0, #26]\n+\tldrh\tr6, [r1, #26]\n \tmovs\tr2, r1\n-\tldrh\tr2, [r7, #24]\n+\tldrh\tr2, [r0, #26]\n \tmovs\tr2, r1\n-\tldrh\tr2, [r1, #24]\n+\tldrh\tr2, [r2, #24]\n \tmovs\tr2, r1\n \tsubs\tr0, #160\t@ 0xa0\n \tmovs\tr3, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrh\tr6, [r0, #20]\n+\tldrh\tr6, [r1, #20]\n \tmovs\tr2, r1\n-\tldrh\tr6, [r3, #18]\n+\tldrh\tr6, [r4, #18]\n \tmovs\tr2, r1\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r3, #8]\n+\tldrh\tr4, [r4, #8]\n \tmovs\tr2, r1\n-\tldrh\tr0, [r2, #8]\n+\tldrh\tr0, [r3, #8]\n \tmovs\tr2, r1\n-\tldrb\tr4, [r2, #1]\n+\tldrb\tr4, [r3, #1]\n \tmovs\tr2, r1\n-\tldrh\tr2, [r4, #6]\n+\tldrh\tr2, [r5, #6]\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::getNameOfNamingScheme[abi:cxx11](unsigned char):\n ./src/mira/readgrouplib.C:808\n@@ -1809754,17 +1809754,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr0, [r6, #58]\t@ 0x3a\n+\tstrh\tr0, [r7, #58]\t@ 0x3a\n \tmovs\tr2, r1\n-\tstrh\tr6, [r1, #58]\t@ 0x3a\n+\tstrh\tr6, [r2, #58]\t@ 0x3a\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::getNameOfSegmentplacement[abi:cxx11](signed char):\n ./src/mira/readgrouplib.C:821\n@@ -1810065,19 +1810065,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr0, [r2, #46]\t@ 0x2e\n+\tstrh\tr0, [r3, #46]\t@ 0x2e\n \tmovs\tr2, r1\n-\tadd\tr0, pc, #96\t@ (adr r0, 379d80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dbf4c>)\n+\tadd\tr0, pc, #128\t@ (adr r0, 379da0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dbf6c>)\n \tmovs\tr2, r1\n-\tstrh\tr2, [r3, #44]\t@ 0x2c\n+\tstrh\tr2, [r4, #44]\t@ 0x2c\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::dumpReadGroupAsMAF(unsigned int, std::ostream&):\n ./src/mira/readgrouplib.C:555\n@@ -1811103,79 +1811103,79 @@\n \tmovs\tr3, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr2, #26\n \tmovs\tr3, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tstrh\tr0, [r2, #40]\t@ 0x28\n+\tstrh\tr0, [r3, #40]\t@ 0x28\n \tmovs\tr2, r1\n-\tstrh\tr2, [r1, #40]\t@ 0x28\n+\tstrh\tr2, [r2, #40]\t@ 0x28\n \tmovs\tr2, r1\n-\tstrh\tr6, [r5, #38]\t@ 0x26\n+\tstrh\tr6, [r6, #38]\t@ 0x26\n \tmovs\tr2, r1\n-\tstrh\tr2, [r0, #38]\t@ 0x26\n+\tstrh\tr2, [r1, #38]\t@ 0x26\n \tmovs\tr2, r1\n-\tstrh\tr0, [r4, #36]\t@ 0x24\n+\tstrh\tr0, [r5, #36]\t@ 0x24\n \tmovs\tr2, r1\n \tadds\tr0, #82\t@ 0x52\n \tmovs\tr3, r2\n-\tstrh\tr4, [r3, #38]\t@ 0x26\n+\tstrh\tr4, [r4, #38]\t@ 0x26\n \tmovs\tr2, r1\n-\tstrh\tr4, [r3, #26]\n+\tstrh\tr4, [r4, #26]\n \tmovs\tr2, r1\n-\tstrh\tr2, [r7, #34]\t@ 0x22\n+\tstrh\tr2, [r0, #36]\t@ 0x24\n \tmovs\tr2, r1\n-\tstrh\tr6, [r3, #34]\t@ 0x22\n+\tstrh\tr6, [r4, #34]\t@ 0x22\n \tmovs\tr2, r1\n-\tstrh\tr2, [r7, #32]\n+\tstrh\tr2, [r0, #34]\t@ 0x22\n \tmovs\tr2, r1\n-\tstrh\tr4, [r2, #32]\n+\tstrh\tr4, [r3, #32]\n \tmovs\tr2, r1\n-\tstrh\tr4, [r2, #30]\n+\tstrh\tr4, [r3, #30]\n \tmovs\tr2, r1\n-\tstrh\tr2, [r2, #28]\n+\tstrh\tr2, [r3, #28]\n \tmovs\tr2, r1\n-\tstrh\tr0, [r2, #26]\n+\tstrh\tr0, [r3, #26]\n \tmovs\tr2, r1\n-\tstrh\tr6, [r1, #24]\n+\tstrh\tr6, [r2, #24]\n \tmovs\tr2, r1\n-\tstrh\tr0, [r2, #22]\n+\tstrh\tr0, [r3, #22]\n \tmovs\tr2, r1\n-\tstrh\tr6, [r1, #20]\n+\tstrh\tr6, [r2, #20]\n \tmovs\tr2, r1\n-\tstrh\tr4, [r2, #18]\n+\tstrh\tr4, [r3, #18]\n \tmovs\tr2, r1\n-\tstrh\tr2, [r3, #16]\n+\tstrh\tr2, [r4, #16]\n \tmovs\tr2, r1\n-\tstrh\tr2, [r3, #14]\n+\tstrh\tr2, [r4, #14]\n \tmovs\tr2, r1\n-\tstrh\tr2, [r3, #12]\n+\tstrh\tr2, [r4, #12]\n \tmovs\tr2, r1\n-\tstrh\tr0, [r0, #10]\n+\tstrh\tr0, [r1, #10]\n \tmovs\tr2, r1\n-\tstrh\tr2, [r5, #6]\n+\tstrh\tr2, [r6, #6]\n \tmovs\tr2, r1\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr4, [r3, #25]\n+\tldrb\tr4, [r4, #25]\n \tmovs\tr2, r1\n-\tldrb\tr0, [r2, #25]\n+\tldrb\tr0, [r3, #25]\n \tmovs\tr2, r1\n-\tldr\tr4, [r2, #88]\t@ 0x58\n+\tldr\tr4, [r3, #88]\t@ 0x58\n \tmovs\tr2, r1\n-\tldrb\tr2, [r0, #29]\n+\tldrb\tr2, [r1, #29]\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::dumpAllReadGroupsAsMAF(std::ostream&):\n ./src/mira/readgrouplib.C:546\n@@ -1811567,21 +1811567,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr4, [r3, #13]\n+\tldrb\tr4, [r4, #13]\n \tmovs\tr2, r1\n-\tldrb\tr0, [r2, #13]\n+\tldrb\tr0, [r3, #13]\n \tmovs\tr2, r1\n-\tldr\tr4, [r2, #40]\t@ 0x28\n+\tldr\tr4, [r3, #40]\t@ 0x28\n \tmovs\tr2, r1\n-\tldrb\tr6, [r1, #24]\n+\tldrb\tr6, [r2, #24]\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::saveAllReadGroupsAsMAF(std::ostream&):\n ./src/mira/readgrouplib.C:526\n@@ -1812475,55 +1812475,55 @@\n \tmovs\tr3, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tmovs\tr7, #254\t@ 0xfe\n \tmovs\tr3, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tldrb\tr2, [r2, #19]\n+\tldrb\tr2, [r3, #19]\n \tmovs\tr2, r1\n-\tudf\t#102\t@ 0x66\n+\tudf\t#110\t@ 0x6e\n \tmovs\tr7, r0\n-\tadds\tr6, #52\t@ 0x34\n+\tadds\tr6, #60\t@ 0x3c\n \tmovs\tr0, r1\n-\t\t\t@ instruction: 0xf0f80007\n-\t\t\t@ instruction: 0xf0cc0007\n-\t\t\t@ instruction: 0xf0b00007\n-\t\t\t@ instruction: 0xf0a00007\n-\teors.w\tr0, r0, #7\n-\teor.w\tr0, r0, #7\n-\torns\tr0, r0, #7\n-\torn\tr0, r0, #7\n-\torrs.w\tr0, r2, #7\n-\torr.w\tr0, r4, #7\n-\tadd\tr2, sp, #480\t@ 0x1e0\n+\tadd.w\tr0, r0, #7\n+\t\t\t@ instruction: 0xf0d40007\n+\t\t\t@ instruction: 0xf0b80007\n+\t\t\t@ instruction: 0xf0a80007\n+\teors.w\tr0, r8, #7\n+\teor.w\tr0, r8, #7\n+\torns\tr0, r8, #7\n+\torn\tr0, r8, #7\n+\torrs.w\tr0, sl, #7\n+\torr.w\tr0, ip, #7\n+\tadd\tr2, sp, #512\t@ 0x200\n \tmovs\tr1, r1\n-\tands.w\tr0, r2, #7\n-\tand.w\tr0, ip, #7\n-\tvext.8\td16, d12, d7, #0\n-\tvaddl.s32\tq8, d14, d7\n-\tvaddl.s32\tq8, d0, d7\n-\tvaddl.s16\tq8, d2, d7\n-\tldrb\tr4, [r2, #9]\n+\tands.w\tr0, sl, #7\n+\tands.w\tr0, r4, #7\n+\tand.w\tr0, r4, #7\n+\tvext.8\td16, d6, d7, #0\n+\tvaddl.s32\tq8, d8, d7\n+\tvaddl.s16\tq8, d10, d7\n+\tldrb\tr4, [r3, #9]\n \tmovs\tr2, r1\n-\tadds\tr3, #188\t@ 0xbc\n+\tadds\tr3, #196\t@ 0xc4\n \tmovs\tr0, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n+\torrs.w\tr0, sl, r6\n \torr.w\tr0, lr, r6\n-\torr.w\tr0, r2, r6\n-\tasrs\tr2, r2, #8\n+\tasrs\tr2, r3, #8\n \tmovs\tr1, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1812977,31 +1812977,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tb.n\t37add4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dcfa0>\n+\tb.n\t37adec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dcfb8>\n \tmovs\tr6, r0\n-\tb.n\t37adc0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dcf8c>\n+\tb.n\t37add8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dcfa4>\n \tmovs\tr6, r0\n-\tlsrs\tr0, r6, #26\n+\tlsrs\tr0, r7, #26\n \tmovs\tr1, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr2, [r7, #21]\n+\tstrb\tr2, [r0, #22]\n \tmovs\tr2, r1\n-\tstrb\tr0, [r0, #22]\n+\tstrb\tr0, [r1, #22]\n \tmovs\tr2, r1\n-\tstrb\tr2, [r5, #21]\n+\tstrb\tr2, [r6, #21]\n \tmovs\tr2, r1\n ReadGroupLib::ReadGroupID::setSequencingType(std::__cxx11::basic_string, std::allocator >):\n ./src/mira/readgrouplib.C:644\n \tldr\tr2, [pc, #276]\t@ (37b134 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dd300>)\n \tldr\tr3, [pc, #280]\t@ (37b138 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dd304>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tadd\tr2, pc\n@@ -1813807,17 +1813807,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr6, [r5, #2]\n+\tstrb\tr6, [r6, #2]\n \tmovs\tr2, r1\n-\tstrb\tr6, [r1, #3]\n+\tstrb\tr6, [r2, #3]\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadGroupLib::zeroVars():\n ./src/mira/readgrouplib.C:71\n@@ -1818350,21 +1818350,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrsb\tr2, [r2, r6]\n+\tldrsb\tr2, [r3, r6]\n \tmovs\tr2, r1\n-\tldrsb\tr6, [r6, r6]\n+\tldrsb\tr6, [r7, r6]\n \tmovs\tr2, r1\n-\t\t\t@ instruction: 0xb804\n+\t\t\t@ instruction: 0xb80c\n \tmovs\tr7, r0\n-\tldrsb\tr2, [r0, r6]\n+\tldrsb\tr2, [r1, r6]\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n std::vector >::_M_default_append(unsigned int):\n /usr/include/c++/10/bits/vector.tcc:611\n@@ -1819784,15 +1819784,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t37d838 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dfa04>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (37d864 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1dfa30>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tpop\t{r2, r4, r5, r6, r7}\n+\tpop\t{pc}\n \tmovs\tr6, r0\n std::_Hashtable, std::allocator >, std::pair, std::allocator > const, signed char>, std::allocator, std::allocator > const, signed char> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_allocate_buckets(unsigned int):\n /usr/include/c++/10/bits/hashtable.h:392\n \tcmp\tr1, #1\n std::_Hashtable, std::allocator >, std::pair, std::allocator > const, signed char>, std::allocator, std::allocator > const, signed char> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_rehash(unsigned int, unsigned int const&):\n /usr/include/c++/10/bits/hashtable.h:2064\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1822310,17 +1822310,17 @@\n \tb.n\t37ec4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e0e18>\n \tb.n\t37f38c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1558>\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t37f37c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1548>\n \tmovs\tr2, r2\n-\tsubs\tr1, #224\t@ 0xe0\n+\tsubs\tr1, #232\t@ 0xe8\n \tmovs\tr2, r1\n-\tsubs\tr1, #222\t@ 0xde\n+\tsubs\tr1, #230\t@ 0xe6\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const [clone .constprop.0]:\n ./src/mira/../../src/mira/stringcontainer.H:114\n@@ -1822606,17 +1822606,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrb\tr6, [r4, #25]\n+\tldrb\tr2, [r6, #25]\n \tmovs\tr6, r0\n-\tldrb\tr4, [r4, #25]\n+\tldrb\tr0, [r6, #25]\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1822789,19 +1822789,19 @@\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t37f104 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e12d0>\n \tmovs\tr2, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tadds\tr6, #210\t@ 0xd2\n+\tadds\tr6, #218\t@ 0xda\n \tmovs\tr2, r1\n-\tstr\tr4, [r6, #52]\t@ 0x34\n+\tstr\tr4, [r7, #52]\t@ 0x34\n \tmovs\tr7, r0\n-\tadds\tr7, #14\n+\tadds\tr7, #22\n \tmovs\tr2, r1\n \tsvc\t204\t@ 0xcc\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n ReadPool::dumpAs(std::ostream&, unsigned char, bool) const:\n ./src/mira/readpool.C:1032\n@@ -1822974,19 +1822974,19 @@\n \tnop\n \tudf\t#240\t@ 0xf0\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tudf\t#222\t@ 0xde\n \tmovs\tr2, r2\n-\tadds\tr5, #140\t@ 0x8c\n+\tadds\tr5, #148\t@ 0x94\n \tmovs\tr2, r1\n-\tstr\tr6, [r5, #32]\n+\tstr\tr6, [r6, #32]\n \tmovs\tr7, r0\n-\tadds\tr5, #200\t@ 0xc8\n+\tadds\tr5, #208\t@ 0xd0\n \tmovs\tr2, r1\n \tudf\t#134\t@ 0x86\n \tmovs\tr2, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n@@ -1823672,35 +1823672,35 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #232\t@ (adr r0, 37f860 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1a2c>)\n+\tadd\tr0, pc, #280\t@ (adr r0, 37f890 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1a5c>)\n \tmovs\tr6, r0\n-\tadd\tr0, pc, #216\t@ (adr r0, 37f854 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1a20>)\n+\tadd\tr0, pc, #264\t@ (adr r0, 37f884 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1a50>)\n \tmovs\tr6, r0\n-\tcpsid\tai\n+\t\t\t@ instruction: 0xb67e\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr1, #100\t@ 0x64\n+\tadds\tr1, #108\t@ 0x6c\n \tmovs\tr2, r1\n-\tmov\tip, r9\n+\tmov\tip, sl\n \tmovs\tr2, r1\n-\tadds\tr1, #76\t@ 0x4c\n+\tadds\tr1, #84\t@ 0x54\n \tmovs\tr2, r1\n-\tadds\tr1, #38\t@ 0x26\n+\tadds\tr1, #46\t@ 0x2e\n \tmovs\tr2, r1\n ReadPool::dumpPoolInfo(std::ostream&) const:\n ./src/mira/readpool.C:1093\n \tldr.w\tr2, [pc, #1076]\t@ 37fbd8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1da4>\n \tldr.w\tr3, [pc, #1076]\t@ 37fbdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1da8>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1824229,15 +1824229,15 @@\n \t...\n \tbvc.n\t37fb4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1d18>\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbvc.n\t37fb30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1cfc>\n \tmovs\tr2, r2\n-\tcmp\tr7, #110\t@ 0x6e\n+\tcmp\tr7, #118\t@ 0x76\n \tmovs\tr2, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tbvs.n\t37fb9c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1d68>\n \tmovs\tr2, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1824245,29 +1824245,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #712]\t@ 0x2c8\n+\tldr\tr3, [sp, #760]\t@ 0x2f8\n \tmovs\tr6, r0\n-\tldr\tr3, [sp, #696]\t@ 0x2b8\n+\tldr\tr3, [sp, #744]\t@ 0x2e8\n \tmovs\tr6, r0\n-\tcbz\tr6, 37fc4a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1e16>\n+\tcbz\tr6, 37fc4c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e1e18>\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr4, [r7, #5]\n+\tstrb\tr0, [r1, #6]\n \tmovs\tr6, r0\n-\tstrb\tr2, [r7, #5]\n+\tstrb\tr6, [r0, #6]\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n ReadPool::adaptFASTQQualValues(unsigned int, unsigned int, unsigned char, bool, unsigned int, unsigned char, unsigned char):\n ./src/mira/readpool.C:448\n@@ -1825225,59 +1825225,59 @@\n \tmovs\tr0, r0\n \tbcc.n\t3803ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e25b8>\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tbeq.n\t380398 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e2564>\n \tmovs\tr2, r2\n-\tmovs\tr7, #138\t@ 0x8a\n+\tmovs\tr7, #146\t@ 0x92\n \tmovs\tr2, r1\n-\tmovs\tr7, #82\t@ 0x52\n+\tmovs\tr7, #90\t@ 0x5a\n \tmovs\tr2, r1\n-\tmovs\tr7, #184\t@ 0xb8\n+\tmovs\tr7, #192\t@ 0xc0\n \tmovs\tr2, r1\n-\tldr\tr5, [sp, #256]\t@ 0x100\n+\tldr\tr5, [sp, #304]\t@ 0x130\n \tmovs\tr6, r0\n \tldmia\tr6, {r2, r5, r6, r7}\n \tmovs\tr2, r2\n-\tmovs\tr6, #166\t@ 0xa6\n+\tmovs\tr6, #174\t@ 0xae\n \tmovs\tr2, r1\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr3, [sp, #640]\t@ 0x280\n+\tstr\tr3, [sp, #688]\t@ 0x2b0\n \tmovs\tr6, r0\n-\tstr\tr3, [sp, #624]\t@ 0x270\n+\tstr\tr3, [sp, #672]\t@ 0x2a0\n \tmovs\tr6, r0\n-\tadd\tr1, sp, #880\t@ 0x370\n+\tadd\tr1, sp, #912\t@ 0x390\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #448]\t@ 0x1c0\n+\tstr\tr2, [sp, #496]\t@ 0x1f0\n \tmovs\tr6, r0\n-\tstr\tr2, [sp, #432]\t@ 0x1b0\n+\tstr\tr2, [sp, #480]\t@ 0x1e0\n \tmovs\tr6, r0\n-\tadd\tr0, sp, #688\t@ 0x2b0\n+\tadd\tr0, sp, #720\t@ 0x2d0\n \tmovs\tr0, r1\n-\tmovs\tr4, #174\t@ 0xae\n+\tmovs\tr4, #182\t@ 0xb6\n \tmovs\tr2, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tmovs\tr4, #42\t@ 0x2a\n+\tmovs\tr4, #50\t@ 0x32\n \tmovs\tr2, r1\n /usr/include/c++/10/sstream:584\n \tmov\tr0, fp\n /usr/include/c++/10/ostream:93\n \tadd.w\tr8, sp, #256\t@ 0x100\n /usr/include/c++/10/sstream:584\n \tbl\t15970 , std::allocator >::~basic_stringbuf()@@Base>\n@@ -1826403,59 +1826403,59 @@\n \t...\n \tldmia\tr2, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldmia\tr2!, {r1, r3, r5, r7}\n \tmovs\tr2, r2\n-\tlsls\tr0, r7, #29\n+\tlsls\tr0, r0, #30\n \tmovs\tr0, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #304\t@ (adr r5, 380e48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e3014>)\n+\tadd\tr5, pc, #352\t@ (adr r5, 380e78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e3044>)\n \tmovs\tr6, r0\n-\tpop\t{r3, r4, r5, r7}\n+\tpop\t{r6, r7}\n \tmovs\tr0, r1\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldmia\tr0!, {r4, r6, r7}\n \tmovs\tr2, r2\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tcbnz\tr4, 380d40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e2f0c>\n+\tcbnz\tr4, 380d42 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e2f0e>\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr6, [r5, #14]\n+\tldrh\tr2, [r7, #14]\n \tmovs\tr6, r0\n-\tldrh\tr2, [r5, #14]\n+\tldrh\tr6, [r6, #14]\n \tmovs\tr6, r0\n-\tadd\tr0, pc, #168\t@ (adr r0, 380df4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e2fc0>)\n+\tadd\tr0, pc, #200\t@ (adr r0, 380e14 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e2fe0>)\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrsh\tr2, [r6, r6]\n+\tldrsh\tr6, [r7, r6]\n \tmovs\tr6, r0\n-\tldrsh\tr6, [r5, r6]\n+\tldrsh\tr2, [r7, r6]\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tsl, sp, #208\t@ 0xd0\n \tmov\tr0, sl\n \tblx\tbcc4 \n@@ -1826772,31 +1826772,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr0, [r6, #54]\t@ 0x36\n+\tstrh\tr4, [r7, #54]\t@ 0x36\n \tmovs\tr6, r0\n-\tstrh\tr2, [r5, #54]\t@ 0x36\n+\tstrh\tr6, [r6, #54]\t@ 0x36\n \tmovs\tr6, r0\n-\tldr\tr5, [sp, #168]\t@ 0xa8\n+\tldr\tr5, [sp, #200]\t@ 0xc8\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tstrh\tr2, [r2, #46]\t@ 0x2e\n+\tstrh\tr6, [r3, #46]\t@ 0x2e\n \tmovs\tr6, r0\n-\tstrh\tr6, [r1, #46]\t@ 0x2e\n+\tstrh\tr2, [r3, #46]\t@ 0x2e\n \tmovs\tr6, r0\n-\tldr\tr4, [sp, #56]\t@ 0x38\n+\tldr\tr4, [sp, #88]\t@ 0x58\n \tmovs\tr0, r1\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr5, sp, #688\t@ 0x2b0\n \tmov\tr0, r5\n \tblx\tbcc4 \n /usr/include/c++/10/ostream:391\n \tldr\tr2, [pc, #752]\t@ (3812f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e34bc>)\n@@ -1827198,37 +1827198,37 @@\n \t...\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr2, [r5, r5]\n+\tldrh\tr6, [r6, r5]\n \tmovs\tr6, r0\n-\tldrh\tr6, [r4, r5]\n+\tldrh\tr2, [r6, r5]\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrb\tr0, [r2, #6]\n+\tldrb\tr4, [r3, #6]\n \tmovs\tr6, r0\n-\tldrb\tr4, [r0, #6]\n+\tldrb\tr0, [r2, #6]\n \tmovs\tr6, r0\n-\tldrsb\tr0, [r7, r7]\n+\tldr\tr0, [r0, r0]\n \tmovs\tr0, r1\n-\tldr\tr4, [r1, r0]\n+\tldr\tr4, [r2, r0]\n \tmovs\tr0, r1\n-\tasrs\tr0, r7, #24\n+\tasrs\tr0, r0, #25\n \tmovs\tr2, r1\n-\tldrb\tr2, [r0, #4]\n+\tldrb\tr6, [r1, #4]\n \tmovs\tr6, r0\n \tldr\tr3, [pc, #984]\t@ (381708 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e38d4>)\n \tmovs\tr6, r0\n \tldr\tr3, [pc, #920]\t@ (3816cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e3898>)\n \tmovs\tr6, r0\n /usr/include/c++/10/sstream:584\n \tmov\tr0, sl\n@@ -1829017,65 +1829017,65 @@\n \tmovs\tr0, r0\n \teors\tr1, r3\n \t...\n \tcbz\tr4, 38222c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e43f8>\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr0, r7, #16\n+\tlsrs\tr0, r0, #17\n \tmovs\tr2, r1\n \tcbz\tr0, 38222e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e43fa>\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr6, r2, #16\n+\tlsrs\tr6, r3, #16\n \tmovs\tr2, r1\n-\tlsrs\tr4, r2, #16\n+\tlsrs\tr4, r3, #16\n \tmovs\tr2, r1\n-\tldr\tr0, [r2, #92]\t@ 0x5c\n+\tldr\tr0, [r3, #92]\t@ 0x5c\n \tmovs\tr7, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tlsrs\tr0, r1, #10\n+\tlsrs\tr0, r2, #10\n \tmovs\tr2, r1\n-\tb.n\t381e00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e3fcc>\n+\tb.n\t381e10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e3fdc>\n \tmovs\tr7, r0\n-\tldr\tr0, [sp, #920]\t@ 0x398\n+\tldr\tr0, [sp, #952]\t@ 0x3b8\n \tmovs\tr0, r1\n-\tlsrs\tr2, r0, #1\n+\tlsrs\tr2, r1, #1\n \tmovs\tr2, r1\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr2, [pc, #928]\t@ (3825cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e4798>)\n+\tldr\tr2, [pc, #976]\t@ (3825fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e47c8>)\n \tmovs\tr6, r0\n-\tldr\tr2, [pc, #920]\t@ (3825c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e4794>)\n+\tldr\tr2, [pc, #968]\t@ (3825f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e47c4>)\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr0, r2, #30\n+\tlsls\tr0, r3, #30\n \tmovs\tr2, r1\n /usr/include/c++/10/fstream:332\n \tldr\tr1, [r0, #0]\n \tmovs\tr2, #17\n \tmov\tr0, r6\n \tblx\tbc58 >::open(char const*, std::_Ios_Openmode)@plt>\n /usr/include/c++/10/fstream:963\n@@ -1830133,57 +1830133,57 @@\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n \tb.n\t38284c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e4a18>\n \tnop\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tmovs\tr2, #14\n+\tmovs\tr2, #22\n \tmovs\tr0, r1\n-\tmovs\tr2, #28\n+\tmovs\tr2, #36\t@ 0x24\n \tmovs\tr0, r1\n-\tlsls\tr0, r0, #23\n+\tlsls\tr0, r1, #23\n \tmovs\tr2, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tlsls\tr4, r1, #20\n+\tlsls\tr4, r2, #20\n \tmovs\tr2, r1\n-\tcmp\tr6, #214\t@ 0xd6\n+\tcmp\tr6, #222\t@ 0xde\n \tmovs\tr1, r1\n-\tlsls\tr0, r3, #19\n+\tlsls\tr0, r4, #19\n \tmovs\tr2, r1\n-\tlsls\tr4, r7, #19\n+\tlsls\tr4, r0, #20\n \tmovs\tr2, r1\n-\tldmia\tr0!, {r1, r2, r3, r5, r6}\n+\tldmia\tr0!, {r1, r3, r4, r5, r6}\n \tmovs\tr6, r0\n-\tstmia\tr7!, {r4, r5, r6, r7}\n+\tstmia\tr7!, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr6, r0\n-\tbgt.n\t382a64 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e4c30>\n+\tbgt.n\t382a74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e4c40>\n \tmovs\tr7, r0\n-\tldrh\tr0, [r5, #60]\t@ 0x3c\n+\tldrh\tr0, [r6, #60]\t@ 0x3c\n \tmovs\tr0, r1\n-\tstmia\tr7!, {r1, r2, r3, r5}\n+\tstmia\tr7!, {r1, r3, r4, r5}\n \tmovs\tr6, r0\n-\tlsls\tr0, r2, #6\n+\tlsls\tr0, r3, #6\n \tmovs\tr2, r1\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tadd\tr4, pc, #984\t@ (adr r4, 382ee0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e50ac>)\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr4!, {r1, r3, r6, r7}\n+\tstmia\tr4!, {r1, r2, r4, r6, r7}\n \tmovs\tr6, r0\n ./src/mira/../../src/mira/readpool.H:216\n \tldr\tr1, [sp, #40]\t@ 0x28\n \tldr\tr0, [sp, #28]\n \tbl\t299f8 \n ./src/mira/readpool.C:967\n \tldr.w\tr1, [r6, #128]\t@ 0x80\n@@ -1831225,59 +1831225,59 @@\n \tblx\tb538 \n ./src/mira/readpool.C:787 (discriminator 13)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t3831bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e5388>\n \tb.n\t383320 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e54ec>\n \tnop\n-\tcdp2\t0, 13, cr0, cr6, cr9, {0}\n-\tcmp\tr0, #180\t@ 0xb4\n+\tcdp2\t0, 13, cr0, cr14, cr9, {0}\n+\tcmp\tr0, #188\t@ 0xbc\n \tmovs\tr0, r1\n-\tcdp2\t0, 1, cr0, cr2, cr9, {0}\n-\tcmp\tr0, #60\t@ 0x3c\n+\tcdp2\t0, 1, cr0, cr10, cr9, {0}\n+\tcmp\tr0, #68\t@ 0x44\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr6, [r2, #0]\n+\tldr\tr2, [r4, #0]\n \tmovs\tr6, r0\n-\tldr\tr6, [r1, #0]\n+\tldr\tr2, [r3, #0]\n \tmovs\tr6, r0\n-\tldrb\tr2, [r1, #25]\n+\tldrb\tr2, [r2, #25]\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldc2\t0, cr0, [sl], {9}\n-\tmrrc2\t0, 0, r0, r0, cr9\t@ \n-\tumlal\tr0, r0, lr, r9\n-\t\t\t@ instruction: 0xfbf00009\n-\tstr\tr2, [r4, #92]\t@ 0x5c\n+\tstc2\t0, cr0, [r2], #36\t@ 0x24\n+\tmrrc2\t0, 0, r0, r8, cr9\n+\t\t\t@ instruction: 0xfbf60009\n+\t\t\t@ instruction: 0xfbf80009\n+\tstr\tr6, [r5, #92]\t@ 0x5c\n \tmovs\tr6, r0\n-\tstr\tr2, [r2, #92]\t@ 0x5c\n+\tstr\tr6, [r3, #92]\t@ 0x5c\n \tmovs\tr6, r0\n-\tldrh\tr0, [r4, #44]\t@ 0x2c\n+\tldrh\tr0, [r5, #44]\t@ 0x2c\n \tmovs\tr0, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa660009\n-\tstr.w\tr0, [r2, r9]\n-\tpop\t{r1, r3, r4, r6, r7, pc}\n+\t\t\t@ instruction: 0xfa6e0009\n+\tstr.w\tr0, [sl, r9]\n+\tpop\t{r1, r2, r5, r6, r7, pc}\n \tmovs\tr6, r0\n-\t\t\t@ instruction: 0xf7c80009\n+\t\t\t@ instruction: 0xf7d00009\n ReadPool::makeTemplateIDs(unsigned char, bool):\n ./src/mira/readpool.C:210\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr3, [pc, #2632]\t@ 383de8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e5fb4>\n \tvpush\t{d8}\n \tsub\tsp, #364\t@ 0x16c\n@@ -1832662,74 +1832662,74 @@\n \tb.n\t383dde , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e5faa>\n \tldr\tr3, [sp, #736]\t@ 0x2e0\n \tmovs\tr2, r2\n \tldr\tr3, [sp, #672]\t@ 0x2a0\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsrs\tr2, r4, #32\n+\tlsrs\tr2, r5, #32\n \tmovs\tr2, r1\n-\t\t\t@ instruction: 0xf7c40009\n+\t\t\t@ instruction: 0xf7cc0009\n \tldr\tr1, [sp, #856]\t@ 0x358\n \tmovs\tr2, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf7680009\n-\t\t\t@ instruction: 0xf75c0009\n-\t\t\t@ instruction: 0xf7680009\n+\t\t\t@ instruction: 0xf7700009\n+\t\t\t@ instruction: 0xf7640009\n+\t\t\t@ instruction: 0xf7700009\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\torrs.w\tr0, lr, #8978432\t@ 0x890000\n-\torrs.w\tr0, r2, #8978432\t@ 0x890000\n-\tbics.w\tr0, r2, #8978432\t@ 0x890000\n-\tusat\tr0, #9, r4\n-\t\t\t@ instruction: 0xf3e40009\n-\tlsrs\tr2, r3, #15\n+\torn\tr0, r6, #8978432\t@ 0x890000\n+\torrs.w\tr0, sl, #8978432\t@ 0x890000\n+\tbics.w\tr0, sl, #8978432\t@ 0x890000\n+\tusat\tr0, #9, ip\n+\t\t\t@ instruction: 0xf3ec0009\n+\tlsrs\tr2, r4, #15\n \tmovs\tr0, r1\n-\t\t\t@ instruction: 0xf3940009\n-\t\t\t@ instruction: 0xf2d20009\n+\t\t\t@ instruction: 0xf39c0009\n+\t\t\t@ instruction: 0xf2da0009\n \t\t\t@ instruction: 0xfbf00014\n-\tbcs.n\t383f0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e60d8>\n+\tbcs.n\t383f1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e60e8>\n \tmovs\tr7, r0\n \t\t\t@ instruction: 0xfbb80014\n-\tsubw\tr0, r8, #9\n-\tsbcs.w\tr0, lr, #9\n+\t\t\t@ instruction: 0xf2b00009\n+\t\t\t@ instruction: 0xf1860009\n \t\t\t@ instruction: 0xfa660014\n-\taddw\tr0, lr, #9\n+\t\t\t@ instruction: 0xf2160009\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tadd\tr5, pc, #296\t@ (adr r5, 383f84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6150>)\n \tmovs\tr2, r2\n-\torns\tr0, ip, #9\n-\tadd\tr0, pc, #336\t@ (adr r0, 383fb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6180>)\n+\teor.w\tr0, r4, #9\n+\tadd\tr0, pc, #384\t@ (adr r0, 383fe4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e61b0>)\n \tmovs\tr6, r0\n-\tvaddl.s32\tq8, d2, d9\n-\tvext.8\td16, d6, d9, #0\n-\tldr\tr0, [r7, r5]\n+\tvaddl.s32\tq8, d10, d9\n+\tvext.8\td16, d14, d9, #0\n+\tldr\tr4, [r0, r6]\n \tmovs\tr6, r0\n-\tldr\tr4, [r5, r5]\n+\tldr\tr0, [r7, r5]\n \tmovs\tr6, r0\n-\tstrh\tr2, [r7, #8]\n+\tstrh\tr2, [r0, #10]\n \tmovs\tr0, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n+\tvaddl.s8\tq0, d6, d9\n \tvhadd.s\td16, d14, d9\n-\tvhadd.s\td16, d6, d9\n-\tvhadd.s16\td16, d6, d9\n-\tldr\tr6, [sp, #728]\t@ 0x2d8\n+\tvhadd.s16\td16, d14, d9\n+\tldr\tr6, [sp, #776]\t@ 0x308\n \tmovs\tr6, r0\n-\tcdp\t0, 14, cr0, cr2, cr9, {0}\n+\tcdp\t0, 14, cr0, cr10, cr9, {0}\n \t\t\t@ instruction: 0xf7e40014\n-\teors.w\tr0, r2, #9\n+\teors.w\tr0, sl, #9\n \t\t\t@ instruction: 0xf7740014\n ReadPool::mergeXMLTraceInfo(std::__cxx11::basic_string, std::allocator > const&, unsigned char):\n ./src/mira/readpool.C:588\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n \tldr.w\tr6, [pc, #2884]\t@ 3849f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6bbc>\n \tvpush\t{d8-d9}\n@@ -1834316,69 +1834316,69 @@\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr0, [sp, #624]\t@ 0x270\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #800\t@ 0x320\n+\tadd\tr6, sp, #832\t@ 0x340\n \tmovs\tr7, r0\n-\tvhadd.s\td0, d12, d9\n-\tstrh\tr2, [r2, #38]\t@ 0x26\n+\tvhadd.s8\td16, d4, d9\n+\tstrh\tr2, [r3, #38]\t@ 0x26\n \tmovs\tr7, r0\n-\tvhadd.s8\td0, d0, d9\n-\tcdp\t0, 12, cr0, cr2, cr9, {0}\n+\tvhadd.s8\td0, d8, d9\n+\tcdp\t0, 12, cr0, cr10, cr9, {0}\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldrb\tr6, [r5, r5]\n+\tldrb\tr2, [r7, r5]\n \tmovs\tr6, r0\n-\tcdp\t0, 0, cr0, cr10, cr9, {0}\n-\tcdp\t0, 4, cr0, cr2, cr9, {0}\n-\tcdp\t0, 4, cr0, cr12, cr9, {0}\n+\tcdp\t0, 1, cr0, cr2, cr9, {0}\n+\tcdp\t0, 4, cr0, cr10, cr9, {0}\n+\tcdp\t0, 5, cr0, cr4, cr9, {0}\n \tldrh\tr4, [r1, #42]\t@ 0x2a\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr0, #210\t@ 0xd2\n+\tcmp\tr0, #222\t@ 0xde\n \tmovs\tr6, r0\n-\tcmp\tr0, #206\t@ 0xce\n+\tcmp\tr0, #218\t@ 0xda\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tb.n\t384938 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6b04>\n+\tb.n\t384948 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6b14>\n \tmovs\tr1, r1\n-\tb.n\t38494c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6b18>\n+\tb.n\t38495c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6b28>\n \tmovs\tr1, r1\n-\tldr\tr4, [pc, #792]\t@ (384d7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6f48>)\n+\tldr\tr4, [pc, #840]\t@ (384dac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6f78>)\n \tmovs\tr6, r0\n-\tldr\tr4, [pc, #776]\t@ (384d70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6f3c>)\n+\tldr\tr4, [pc, #824]\t@ (384da0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6f6c>)\n \tmovs\tr6, r0\n-\tstr\tr2, [r0, #48]\t@ 0x30\n+\tstr\tr2, [r1, #48]\t@ 0x30\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr3, [pc, #640]\t@ (384cf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6ec0>)\n+\tldr\tr3, [pc, #688]\t@ (384d24 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6ef0>)\n \tmovs\tr6, r0\n-\tldr\tr3, [pc, #624]\t@ (384ce8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6eb4>)\n+\tldr\tr3, [pc, #672]\t@ (384d18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6ee4>)\n \tmovs\tr6, r0\n-\tstr\tr4, [r3, #28]\n+\tstr\tr4, [r4, #28]\n \tmovs\tr0, r1\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr5, sp, #296\t@ 0x128\n \tldr\tr6, [pc, #592]\t@ (384cd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e6e9c>)\n \tmov\tr0, r5\n \tadd\tr7, sp, #232\t@ 0xe8\n \tblx\tbcc4 \n@@ -1834701,31 +1834701,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr1, [pc, #904]\t@ (385070 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e723c>)\n+\tldr\tr1, [pc, #952]\t@ (3850a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e726c>)\n \tmovs\tr6, r0\n-\tldr\tr1, [pc, #888]\t@ (385064 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7230>)\n+\tldr\tr1, [pc, #936]\t@ (385094 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7260>)\n \tmovs\tr6, r0\n-\tstr\tr6, [r3, #0]\n+\tstr\tr6, [r4, #0]\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr0, [pc, #752]\t@ (384ff0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e71bc>)\n+\tldr\tr0, [pc, #800]\t@ (385020 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e71ec>)\n \tmovs\tr6, r0\n-\tldr\tr0, [pc, #736]\t@ (384fe4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e71b0>)\n+\tldr\tr0, [pc, #784]\t@ (385014 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e71e0>)\n \tmovs\tr6, r0\n-\tldrsh\tr0, [r7, r3]\n+\tldrsh\tr0, [r0, r4]\n \tmovs\tr0, r1\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd\tr5, sp, #296\t@ 0x128\n \tldr\tr6, [pc, #756]\t@ (385000 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e71cc>)\n \tmov\tr0, r5\n \tadd\tr7, sp, #232\t@ 0xe8\n \tblx\tbcc4 \n@@ -1835131,33 +1835131,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tbx\tsl\n+\tbx\tip\n \tmovs\tr6, r0\n-\tbx\tsl\n+\tbx\tfp\n \tmovs\tr6, r0\n-\tldrb\tr2, [r2, r6]\n+\tldrb\tr2, [r3, r6]\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr2, r7, #30\n \tmovs\tr6, r0\n-\tsubs\tr4, #178\t@ 0xb2\n+\tsubs\tr4, #190\t@ 0xbe\n \tmovs\tr6, r0\n-\tsvc\t130\t@ 0x82\n+\tsvc\t138\t@ 0x8a\n \tmovs\tr1, r1\n-\tsvc\t16\n+\tsvc\t24\n \tmovs\tr1, r1\n ReadPool::refreshNameIndex():\n ./src/mira/readpool.C:1148\n \tldr\tr2, [pc, #928]\t@ (3853e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e75ac>)\n \tldr\tr3, [pc, #932]\t@ (3853e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e75b0>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1835657,17 +1835657,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr4, r6, r0\n+\tsubs\tr0, r0, r1\n \tmovs\tr6, r0\n-\tsubs\tr2, r6, r0\n+\tsubs\tr6, r7, r0\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1836113,49 +1836113,49 @@\n \tldr\tr3, [pc, #40]\t@ (3857b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7984>)\n \tldr.w\tr2, [fp, r9]\n \tldr.w\tr1, [fp, r3]\n \tblx\tb700 <__cxa_throw@plt>\n \tnop\n \tnop.w\n \t...\n-\tble.n\t3856b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7884>\n+\tble.n\t3856c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7894>\n \tmovs\tr1, r1\n-\tble.n\t3858a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7a74>\n+\tble.n\t3856b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7884>\n \tmovs\tr1, r1\n-\tble.n\t385800 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e79cc>\n+\tble.n\t385810 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e79dc>\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbgt.n\t38574c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7918>\n+\tbgt.n\t38575c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7928>\n \tmovs\tr1, r1\n-\tbgt.n\t38574c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7918>\n+\tbgt.n\t38575c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e7928>\n \tmovs\tr1, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr6, r4, #24\n+\tasrs\tr2, r6, #24\n \tmovs\tr6, r0\n-\tasrs\tr4, r4, #24\n+\tasrs\tr0, r6, #24\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tsubs\tr5, #236\t@ 0xec\n+\tsubs\tr5, #248\t@ 0xf8\n \tmovs\tr6, r0\n-\tsubs\tr5, #232\t@ 0xe8\n+\tsubs\tr5, #244\t@ 0xf4\n \tmovs\tr6, r0\n-\tstrb\tr0, [r5, r0]\n+\tstrb\tr0, [r6, r0]\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:460\n \tmov\tr6, r5\n \tmov\tr5, r9\n /usr/include/c++/10/bits/basic_ios.h:462\n@@ -1836495,17 +1836495,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tasrs\tr6, r0, #13\n+\tasrs\tr2, r2, #13\n \tmovs\tr6, r0\n-\tasrs\tr4, r0, #13\n+\tasrs\tr0, r2, #13\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1836891,19 +1836891,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr0, #152\t@ 0x98\n+\tsubs\tr0, #164\t@ 0xa4\n \tmovs\tr6, r0\n-\tsubs\tr0, #148\t@ 0x94\n+\tsubs\tr0, #160\t@ 0xa0\n \tmovs\tr6, r0\n-\tldr\tr6, [pc, #848]\t@ (38610c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e82d8>)\n+\tldr\tr6, [pc, #880]\t@ (38612c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e82f8>)\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1837950,66 +1837950,66 @@\n \tnop\n \tstrb\tr0, [r0, #6]\n \tmovs\tr2, r2\n \tstrb\tr6, [r7, #5]\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldrb\tr0, [r2, #21]\n+\tldrb\tr4, [r3, #21]\n \tmovs\tr6, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tbmi.n\t386550 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e871c>\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr3, sp, #440\t@ 0x1b8\n+\tadd\tr3, sp, #472\t@ 0x1d8\n \tmovs\tr7, r0\n \tbmi.n\t3864f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e86bc>\n \tmovs\tr4, r2\n \tldr\tr4, [r2, #104]\t@ 0x68\n \tmovs\tr2, r2\n-\tbne.n\t3865bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e8788>\n+\tbne.n\t3865cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e8798>\n \tmovs\tr1, r1\n-\tbne.n\t3864a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e866c>\n+\tbne.n\t3864b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e867c>\n \tmovs\tr1, r1\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr0, r0, #7\n+\tlsrs\tr4, r1, #7\n \tmovs\tr6, r0\n-\tlsrs\tr6, r7, #6\n+\tlsrs\tr2, r1, #7\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tbne.n\t386544 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e8710>\n \tmovs\tr4, r2\n-\tldmia\tr7, {r1, r4, r5, r6, r7}\n+\tldmia\tr7, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr1, r1\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tldrb\tr0, [r4, #18]\n \tmovs\tr2, r2\n \t\t\t@ instruction: 0xfa0c0005\n \tbeq.n\t386590 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e875c>\n \tmovs\tr4, r2\n-\tbeq.n\t386658 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e8824>\n+\tbeq.n\t386668 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e8834>\n \tmovs\tr1, r1\n \tldmia\tr7, {r2, r3, r4, r5, r6, r7}\n \tmovs\tr4, r2\n std::_Hashtable, std::allocator >, std::pair, std::allocator > const, int>, std::allocator, std::allocator > const, int> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::~_Hashtable():\n /usr/include/c++/10/bits/hashtable.h:1383\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr6, r0\n@@ -1838253,15 +1838253,15 @@\n \tblx\tb538 \n /usr/include/c++/10/bits/deque.tcc:511\n \tblx\tb9cc <__cxa_rethrow@plt>\n /usr/include/c++/10/bits/deque.tcc:508\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tlsrs\tr0, r1, #32\n+\tlsrs\tr4, r2, #32\n \tmovs\tr6, r0\n std::_Hashtable, std::allocator >, std::pair, std::allocator > const, int>, std::allocator, std::allocator > const, int> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::find(std::__cxx11::basic_string, std::allocator > const&):\n /usr/include/c++/10/bits/hashtable.h:1447\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr8, r1\n \tmov\tr4, r0\n /usr/include/c++/10/bits/functional_hash.h:197\n@@ -1839668,27 +1839668,27 @@\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r7, #8]\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #768]\t@ 0x300\n+\tstr\tr5, [sp, #800]\t@ 0x320\n \tmovs\tr7, r0\n-\tstrh\tr6, [r6, #0]\n+\tstrh\tr2, [r0, #2]\n \tmovs\tr6, r0\n-\tldr\tr0, [pc, #672]\t@ (38744c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e9618>)\n+\tldr\tr0, [pc, #704]\t@ (38746c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e9638>)\n \tmovs\tr0, r1\n-\tldrb\tr4, [r2, #31]\n+\tldrb\tr0, [r4, #31]\n \tmovs\tr6, r0\n \tldrsh\tr2, [r2, r5]\n \tmovs\tr2, r2\n-\tstmia\tr4!, {r2, r4, r6, r7}\n+\tstmia\tr4!, {r2, r3, r4, r6, r7}\n \tmovs\tr1, r1\n-\tstmia\tr4!, {r2, r3, r4, r5, r7}\n+\tstmia\tr4!, {r2, r6, r7}\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadPoolIO::discard():\n ./src/mira/readpool_io.C:104\n@@ -1840201,31 +1840201,31 @@\n \tnop\n \tldrh\tr0, [r5, r4]\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r3, r4]\n \tmovs\tr2, r2\n-\tasrs\tr2, r7, #5\n+\tasrs\tr2, r0, #6\n \tmovs\tr3, r1\n \tldrh\tr0, [r3, r3]\n \tmovs\tr2, r2\n-\tstmia\tr1!, {r2, r4, r5, r6}\n+\tstmia\tr1!, {r2, r3, r4, r5, r6}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {r1, r2, r4, r5, r6}\n+\tstmia\tr1!, {r1, r2, r3, r4, r5, r6}\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r2, r5, r6}\n+\tstmia\tr1!, {r2, r3, r5, r6}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {r1, r2, r3, r5, r6}\n+\tstmia\tr1!, {r1, r2, r4, r5, r6}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {}\n+\tstmia\tr1!, {r3}\n \tmovs\tr1, r1\n ReadPoolIO::priv_openFiles_fasta():\n ./src/mira/readpool_io.C:277\n \tldr\tr1, [pc, #848]\t@ (387924 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e9af0>)\n /usr/include/c++/10/fstream:332\n \tmovs\tr2, #8\n ./src/mira/readpool_io.C:277\n@@ -1840686,43 +1840686,43 @@\n \tmovs\tr2, r2\n \tldr\tr4, [r3, r3]\n \tmovs\tr2, r2\n \tldr\tr4, [r2, r2]\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r1, r3, r4}\n+\tstmia\tr0!, {r1, r5}\n \tmovs\tr1, r1\n \tldr\tr2, [r2, r1]\n \tmovs\tr2, r2\n-\tstmia\tr0!, {r2, r3, r4, r5}\n+\tstmia\tr0!, {r2, r6}\n \tmovs\tr1, r1\n-\titee\thi\n-\tmovhi\tr1, r1\n-\titee\tvs\t@ unpredictable \n-\tmovvs\tr1, r1\n-\tlsrvc\tr0, r0, #18\n+\titet\tls\n+\tmovls\tr1, r1\n+\titet\tvc\t@ unpredictable \n+\tmovvc\tr1, r1\n+\tlsrvs\tr0, r0, #18\n \tmovvc\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r2, r3, r4}\n+\tstmia\tr0!, {r2, r5}\n \tmovs\tr1, r1\n-\titee\tne\n+\titte\tne\n \tmovne\tr1, r1\n-\twfieq\n-\tmoveq\tr1, r1\n-\tstrb\tr2, [r1, #25]\n+\tit\tcc\t@ unpredictable \n+\tmovcc\tr1, r1\n+\tstrb\tr6, [r2, #25]\n \tmovs\tr6, r0\n-\tbkpt\t0x0092\n+\tbkpt\t0x009a\n \tmovs\tr1, r1\n-\tit\teq\n-\tmoveq\tr1, r1\n-\titet\teq\n-\tmoveq\tr1, r1\n-\tbkpt\t0x0020\n+\tyield\n+\tmovs\tr1, r1\n+\titee\tne\n+\tmovne\tr1, r1\n+\tbkpt\t0x0028\n \tmoveq\tr1, r1\n ReadPoolIO::ReadPoolIO(ReadPool&):\n ./src/mira/readpool_io.C:40\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr8, [pc, #708]\t@ 387c48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e9e14>\n \tsub\tsp, #36\t@ 0x24\n@@ -1841077,15 +1841077,15 @@\n \tmovs\tr2, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tcbnz\tr6, 387c84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e9e50>\n+\tcbnz\tr6, 387c86 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e9e52>\n \tmovs\tr1, r1\n ReadPoolIO::priv_loadNextSeqs_exp():\n ./src/mira/readpool_io.C:969\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr3, [pc, #2220]\t@ 388510 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ea6dc>\n \tsub\tsp, #276\t@ 0x114\n@@ -1842129,29 +1842129,29 @@\n \tmovs\tr2, r2\n \tstrh\tr0, [r6, r3]\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr4, [r4, r7]\n \tmovs\tr2, r2\n-\tasrs\tr0, r4, #10\n+\tasrs\tr4, r5, #10\n \tmovs\tr6, r0\n-\tasrs\tr4, r3, #10\n+\tasrs\tr0, r5, #10\n \tmovs\tr6, r0\n-\tcmp\tr0, #220\t@ 0xdc\n+\tcmp\tr0, #228\t@ 0xe4\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tbls.n\t388498 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ea664>\n \tmovs\tr5, r0\n-\tcbz\tr0, 3885b2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ea77e>\n+\tcbz\tr0, 3885b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ea780>\n \tmovs\tr1, r1\n ReadPoolIO::priv_loadNextSeqs_gbf(unsigned long long, unsigned long long):\n ./src/mira/readpool_io.C:777\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr7, r0\n ./src/mira/readpool_io.C:780\n \tldrb.w\tr0, [r0, #880]\t@ 0x370\n@@ -1843366,31 +1843366,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tlsrs\tr2, r3, #1\n+\tlsrs\tr6, r4, #1\n \tmovs\tr6, r0\n-\tlsrs\tr6, r2, #1\n+\tlsrs\tr2, r4, #1\n \tmovs\tr6, r0\n-\tsubs\tr6, r2, #2\n+\tsubs\tr6, r3, #2\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr2, r3, #29\n+\tlsls\tr6, r4, #29\n \tmovs\tr6, r0\n-\tlsls\tr6, r1, #29\n+\tlsls\tr2, r3, #29\n \tmovs\tr6, r0\n-\tcmp\tr7, #30\n+\tcmp\tr7, #38\t@ 0x26\n \tmovs\tr0, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_construct.h:151\n \tldr\tr5, [sp, #44]\t@ 0x2c\n \tldr\tr2, [sp, #56]\t@ 0x38\n \tcmp\tr5, r2\n@@ -1844989,17 +1844989,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tvld4.8\t{d0-d3}, [sl], r5\n-\tvld4.8\t{d0-d3}, [r6], r5\n-\tlsrs\tr6, r4, #29\n+\tldrsh.w\tr0, [r6, r5]\n+\tldrsh.w\tr0, [r2, r5]\n+\tlsrs\tr6, r5, #29\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1845395,27 +1845395,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n+\t\t\t@ instruction: 0xf7ca0005\n \t\t\t@ instruction: 0xf7be0005\n-\t\t\t@ instruction: 0xf7b20005\n-\tsubs\tr2, r0, #6\n+\tsubs\tr2, r1, #6\n \tmovs\tr0, r1\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldr\tr2, [sp, #456]\t@ 0x1c8\n+\tldr\tr2, [sp, #488]\t@ 0x1e8\n \tmovs\tr1, r1\n-\tldr\tr2, [sp, #416]\t@ 0x1a0\n+\tldr\tr2, [sp, #448]\t@ 0x1c0\n \tmovs\tr1, r1\n ./src/mira/readpool_io.C:877\n \tadd\tr4, sp, #248\t@ 0xf8\n \tmov\tr0, r4\n \tbl\t386db0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1e8f7c>\n /usr/include/c++/10/ostream:611\n \tldr\tr1, [pc, #444]\t@ (38a1d4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ec3a0>)\n@@ -1845651,21 +1845651,21 @@\n \tblx\tb538 \n ./src/mira/readpool_io.C:842 (discriminator 11)\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t38a09c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ec268>\n \tb.n\t38a1c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ec394>\n \tnop\n-\tmovs\tr2, r7\n+\tlsls\tr6, r0, #1\n \tmovs\tr6, r0\n-\tldr\tr1, [sp, #64]\t@ 0x40\n+\tldr\tr1, [sp, #96]\t@ 0x60\n \tmovs\tr1, r1\n-\tldr\tr1, [sp, #120]\t@ 0x78\n+\tldr\tr1, [sp, #152]\t@ 0x98\n \tmovs\tr1, r1\n-\tldr\tr0, [sp, #592]\t@ 0x250\n+\tldr\tr0, [sp, #624]\t@ 0x270\n \tmovs\tr1, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n ReadPoolIO::priv_loadNextSeqs_fofnexp(unsigned long long, unsigned long long):\n ./src/mira/readpool_io.C:929\n@@ -1846886,31 +1846886,31 @@\n \t...\n \tcmp\tr5, #96\t@ 0x60\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr5, #80\t@ 0x50\n \tmovs\tr2, r2\n-\tstr\tr7, [sp, #120]\t@ 0x78\n+\tstr\tr7, [sp, #152]\t@ 0x98\n \tmovs\tr1, r1\n \tcmp\tr3, #96\t@ 0x60\n \tmovs\tr2, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xeb980005\n-\t\t\t@ instruction: 0xeb940005\n-\tlsls\tr4, r2, #7\n+\tsub.w\tr0, r4, r5\n+\tsub.w\tr0, r0, r5\n+\tlsls\tr4, r3, #7\n \tmovs\tr0, r1\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1848361,45 +1848361,45 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n-\tldrh\tr2, [r6, #18]\n+\tldrh\tr2, [r7, #18]\n \tmovs\tr1, r1\n-\tldrh\tr0, [r7, #18]\n+\tldrh\tr0, [r0, #20]\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tadds\tr0, r7, #3\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstrh\tr6, [r5, #54]\t@ 0x36\n+\tstrh\tr6, [r6, #54]\t@ 0x36\n \tmovs\tr1, r1\n-\tstrh\tr4, [r6, #48]\t@ 0x30\n+\tstrh\tr4, [r7, #48]\t@ 0x30\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr4, [r4, #48]\t@ 0x30\n+\tstrh\tr4, [r5, #48]\t@ 0x30\n \tmovs\tr1, r1\n-\tstrh\tr2, [r0, #46]\t@ 0x2e\n+\tstrh\tr2, [r1, #46]\t@ 0x2e\n \tmovs\tr1, r1\n \tadd\tr1, sp, #880\t@ 0x370\n \tmovs\tr5, r0\n-\tadd\tr7, pc, #88\t@ (adr r7, 38b740 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ed90c>)\n+\tadd\tr7, pc, #120\t@ (adr r7, 38b760 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ed92c>)\n \tmovs\tr0, r1\n-\tstrh\tr0, [r2, #42]\t@ 0x2a\n+\tstrh\tr0, [r3, #42]\t@ 0x2a\n \tmovs\tr1, r1\n-\tsubs\tr1, #188\t@ 0xbc\n+\tsubs\tr1, #200\t@ 0xc8\n \tmovs\tr6, r0\n-\tstrh\tr6, [r3, #38]\t@ 0x26\n+\tstrh\tr6, [r4, #38]\t@ 0x26\n \tmovs\tr1, r1\n \tadd\tr0, sp, #952\t@ 0x3b8\n \tmovs\tr5, r0\n ReadPoolIO::priv_openFiles():\n ./src/mira/readpool_io.C:161\n \tldr\tr2, [pc, #532]\t@ (38b910 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edadc>)\n \tldr\tr3, [pc, #536]\t@ (38b914 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edae0>)\n@@ -1848712,43 +1848712,43 @@\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadds\tr2, r3, r1\n \tmovs\tr2, r2\n \tadds\tr6, r0, r1\n \tmovs\tr2, r2\n-\tcbnz\tr4, 38b95a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb26>\n+\tcbnz\tr4, 38b95c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb28>\n \tmovs\tr7, r0\n-\tmovs\tr2, #124\t@ 0x7c\n+\tmovs\tr2, #136\t@ 0x88\n \tmovs\tr6, r0\n-\tbic.w\tr0, r2, #8716288\t@ 0x850000\n-\tmovs\tr2, #90\t@ 0x5a\n+\tbic.w\tr0, lr, #8716288\t@ 0x850000\n+\tmovs\tr2, #102\t@ 0x66\n \tmovs\tr6, r0\n-\tbmi.n\t38b878 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1eda44>\n+\tbmi.n\t38b890 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1eda5c>\n \tmovs\tr5, r0\n-\tmovs\tr2, #70\t@ 0x46\n+\tmovs\tr2, #82\t@ 0x52\n \tmovs\tr6, r0\n-\tubfx\tr0, r6, #0, #6\n-\t\t\t@ instruction: 0xf39a0005\n-\tbgt.n\t38b990 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb5c>\n+\t\t\t@ instruction: 0xf3d20005\n+\tusat16\tr0, #5, r6\n+\tbgt.n\t38b9a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb74>\n \tmovs\tr5, r0\n-\tbgt.n\t38b964 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb30>\n+\tbgt.n\t38b97c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb48>\n \tmovs\tr5, r0\n-\tblt.n\t38b93c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb08>\n+\tbgt.n\t38b954 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb20>\n \tmovs\tr5, r0\n-\tblt.n\t38b93c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb08>\n+\tbgt.n\t38b954 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1edb20>\n \tmovs\tr5, r0\n-\t\t\t@ instruction: 0xf3580005\n-\tmovs\tr1, #162\t@ 0xa2\n+\tbfi\tr0, r4, #0, #6\n+\tmovs\tr1, #174\t@ 0xae\n \tmovs\tr6, r0\n-\tsbfx\tr0, r6, #0, #6\n-\tstrh\tr2, [r3, #18]\n+\t\t\t@ instruction: 0xf3520005\n+\tstrh\tr2, [r4, #18]\n \tmovs\tr1, r1\n-\tstrb.w\tr0, [r0, r5]\n-\tstrh\tr2, [r6, #16]\n+\tstrb.w\tr0, [ip, r5]\n+\tstrh\tr2, [r7, #16]\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadPoolIO::registerFile(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, ReadGroupLib::ReadGroupID, bool):\n ./src/mira/readpool_io.C:128\n@@ -1849003,33 +1849003,33 @@\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr4, r3, #23\n \tmovs\tr2, r2\n \tasrs\tr4, r7, #21\n \tmovs\tr2, r2\n-\tstrh\tr4, [r0, #14]\n+\tstrh\tr4, [r1, #14]\n \tmovs\tr1, r1\n-\tldrb\tr6, [r2, #17]\n+\tldrb\tr6, [r3, #17]\n \tmovs\tr1, r1\n-\tstrh\tr4, [r5, #12]\n+\tstrh\tr4, [r6, #12]\n \tmovs\tr1, r1\n-\tstrh\tr4, [r7, #4]\n+\tstrh\tr4, [r0, #6]\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr2, [r5, r1]\n+\tstrb\tr6, [r6, r1]\n \tmovs\tr6, r0\n-\tldrb\tr0, [r1, #15]\n+\tldrb\tr0, [r2, #15]\n \tmovs\tr1, r1\n-\tstrh\tr6, [r6, #0]\n+\tstrh\tr6, [r7, #0]\n \tmovs\tr1, r1\n-\tstrh\tr0, [r6, #0]\n+\tstrh\tr0, [r7, #0]\n \tmovs\tr1, r1\n ReadPoolIO::registerFile(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, ReadGroupLib::ReadGroupID, bool):\n ./src/mira/readpool_io.C:111\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tldr\tr1, [pc, #808]\t@ (38beb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ee084>)\n \tvpush\t{d8}\n@@ -1849535,22 +1849535,22 @@\n \tblx\tbcd0 \n \tb.n\t38be6a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ee036>\n \tb.n\t38be78 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ee044>\n \tasrs\tr2, r1, #15\n \tmovs\tr2, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tcdp\t0, 7, cr0, cr8, cr5, {0}\n+\tcdp\t0, 8, cr0, cr4, cr5, {0}\n \tasrs\tr4, r3, #7\n \tmovs\tr2, r2\n-\tldmia\tr6, {r3, r6}\n+\tldmia\tr6, {r2, r4, r6}\n \tmovs\tr5, r0\n \tldr\tr7, [sp, #712]\t@ 0x2c8\n \tmovs\tr5, r0\n-\tldmia\tr4!, {r1, r2, r3, r5, r7}\n+\tldmia\tr4, {r1, r3, r4, r5, r7}\n \tmovs\tr5, r0\n ReadPoolIO::priv_loadNextSeqs_fastq(unsigned long long, unsigned long long):\n ./src/mira/readpool_io.C:458\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr4, [pc, #1428]\t@ 38c470 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ee63c>\n \tldr.w\tr1, [pc, #1428]\t@ 38c474 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ee640>\n \tadd\tr4, pc\n@@ -1850308,32 +1850308,32 @@\n \tmovs\tr0, r0\n \tstrb\tr6, [r3, #25]\n \tmovs\tr4, r2\n \tasrs\tr2, r3, #1\n \tmovs\tr2, r2\n \tstrb\tr4, [r2, #24]\n \tmovs\tr4, r2\n-\tcmp\tr2, r1\n+\tcmp\tr2, r2\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xf7f80007\n+\tstrb.w\tr0, [r0, r7]\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n \tlsrs\tr6, r1, #20\n \tmovs\tr2, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrb\tr2, [r5, #4]\n+\tldrb\tr2, [r6, #4]\n \tmovs\tr1, r1\n-\tldrb\tr6, [r6, #2]\n+\tldrb\tr6, [r7, #2]\n \tmovs\tr1, r1\n-\tldrb\tr4, [r2, #3]\n+\tldrb\tr4, [r3, #3]\n \tmovs\tr1, r1\n-\tcmp\tr3, #104\t@ 0x68\n+\tcmp\tr3, #116\t@ 0x74\n \tmovs\tr6, r0\n /usr/include/c++/10/bits/basic_string.h:2554\n \tldr.w\tr1, [pc, #2944]\t@ 38d030 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ef1fc>\n \tmovs\tr3, #2\n \tmovs\tr2, #0\n \tmov\tr0, fp\n \tadd\tr1, pc\n@@ -1851798,35 +1851798,35 @@\n \tmov\tr0, r5\n \tldr\tr5, [pc, #60]\t@ (38d060 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ef22c>)\n \tldr\tr7, [sp, #36]\t@ 0x24\n \tldr\tr2, [r7, r6]\n \tldr\tr1, [r7, r5]\n \tblx\tb700 <__cxa_throw@plt>\n \tnop\n-\tstrb\tr6, [r1, #29]\n+\tstrb\tr6, [r2, #29]\n \tmovs\tr1, r1\n-\tmovs\tr1, #20\n+\tmovs\tr1, #32\n \tmovs\tr6, r0\n-\tbgt.n\t38cfe4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ef1b0>\n+\tbgt.n\t38cffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ef1c8>\n \tmovs\tr5, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr2, [r6, #84]\t@ 0x54\n+\tldr\tr2, [r7, #84]\t@ 0x54\n \tmovs\tr1, r1\n-\tldr\tr4, [r7, #88]\t@ 0x58\n+\tldr\tr4, [r0, #92]\t@ 0x5c\n \tmovs\tr1, r1\n-\tldr\tr4, [r2, #92]\t@ 0x5c\n+\tldr\tr4, [r3, #92]\t@ 0x5c\n \tmovs\tr1, r1\n-\tldr\tr0, [r0, #92]\t@ 0x5c\n+\tldr\tr0, [r1, #92]\t@ 0x5c\n \tmovs\tr1, r1\n-\tldr\tr2, [r0, #92]\t@ 0x5c\n+\tldr\tr2, [r1, #92]\t@ 0x5c\n \tmovs\tr1, r1\n-\tldr\tr2, [r7, #88]\t@ 0x58\n+\tldr\tr2, [r0, #92]\t@ 0x5c\n \tmovs\tr1, r1\n-\tldr\tr0, [r1, #96]\t@ 0x60\n+\tldr\tr0, [r2, #96]\t@ 0x60\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr8, sp, #328\t@ 0x148\n@@ -1852267,19 +1852267,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstmia\tr3!, {r2, r3, r5, r6, r7}\n+\tstmia\tr3!, {r3, r4, r5, r6, r7}\n \tmovs\tr5, r0\n-\tstmia\tr3!, {r3, r5, r6, r7}\n+\tstmia\tr3!, {r2, r4, r5, r6, r7}\n \tmovs\tr5, r0\n-\tbge.n\t38d3f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ef5c4>\n+\tbge.n\t38d408 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ef5d4>\n \tmovs\tr7, r0\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n@@ -1853169,49 +1853169,49 @@\n \tstr\tr4, [sp, #264]\t@ 0x108\n \tldr.w\tr0, [r4, #-12]\n \tadd\tr0, r3\n \tstr.w\tr6, [r0, #-208]\n \tb.n\t38da20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1efbec>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr6, r0, #30\n+\tlsls\tr2, r2, #30\n \tmovs\tr6, r0\n-\tldr\tr2, [r7, #4]\n+\tldr\tr2, [r0, #8]\n \tmovs\tr1, r1\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tstr\tr6, [r7, #4]\n \tmovs\tr4, r2\n-\tldr\tr2, [r5, #8]\n+\tldr\tr2, [r6, #8]\n \tmovs\tr1, r1\n-\tldr\tr2, [r7, #0]\n+\tldr\tr2, [r0, #4]\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [r2, #108]\t@ 0x6c\n+\tstr\tr6, [r3, #108]\t@ 0x6c\n \tmovs\tr1, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\trev\tr0, r2\n+\trev\tr0, r3\n \tmovs\tr6, r0\n-\trev\tr6, r4\n+\trev\tr6, r5\n \tmovs\tr6, r0\n \tstrh\tr2, [r1, #46]\t@ 0x2e\n \tmovs\tr5, r0\n-\tstr\tr4, [r1, #104]\t@ 0x68\n+\tstr\tr4, [r2, #104]\t@ 0x68\n \tmovs\tr1, r1\n-\tstr\tr6, [r3, #88]\t@ 0x58\n+\tstr\tr6, [r4, #88]\t@ 0x58\n \tmovs\tr1, r1\n \tstrh\tr6, [r3, #42]\t@ 0x2a\n \tmovs\tr5, r0\n-\tstr\tr4, [r0, #92]\t@ 0x5c\n+\tstr\tr4, [r1, #92]\t@ 0x5c\n \tmovs\tr1, r1\n-\tstr\tr2, [r6, #80]\t@ 0x50\n+\tstr\tr2, [r7, #80]\t@ 0x50\n \tmovs\tr1, r1\n \tldrh\tr0, [r0, r6]\n \tmovs\tr4, r2\n ReadPoolIO::priv_loadNextSeqs_fasta(unsigned long long, unsigned long long):\n ./src/mira/readpool_io.C:646\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n@@ -1853660,30 +1853660,30 @@\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r3, r2]\n \tmovs\tr4, r2\n \teors.w\tr0, ip, #9502720\t@ 0x910000\n \tldrh\tr0, [r5, r1]\n \tmovs\tr4, r2\n-\tcmp\tr1, #188\t@ 0xbc\n+\tcmp\tr1, #196\t@ 0xc4\n \tmovs\tr7, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr0, [r4, #36]\t@ 0x24\n+\tstr\tr0, [r5, #36]\t@ 0x24\n \tmovs\tr1, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstr\tr0, [r2, #36]\t@ 0x24\n+\tstr\tr0, [r3, #36]\t@ 0x24\n \tmovs\tr1, r1\n \t\t\t@ instruction: 0xf21a0011\n-\tbls.n\t38de28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1efff4>\n+\tbls.n\t38de38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f0004>\n \tmovs\tr7, r0\n-\tasrs\tr0, r6, #5\n+\tasrs\tr4, r7, #5\n \tmovs\tr6, r0\n \tadds\tr0, #25\n ./src/mira/../../src/util/progressindic.H:125\n \tuxtb\tr2, r0\n /usr/include/c++/10/ostream:611\n \tmov\tr0, r9\n ./src/mira/../../src/util/progressindic.H:125\n@@ -1853959,29 +1853959,29 @@\n \tmov\tr0, r4\n \tldr\tr7, [pc, #52]\t@ (38e0ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f0278>)\n \tldr\tr4, [sp, #16]\n \tldr\tr2, [r4, r6]\n \tldr\tr1, [r4, r7]\n \tblx\tb700 <__cxa_throw@plt>\n \t...\n-\tasrs\tr0, r3, #3\n+\tasrs\tr4, r4, #3\n \tmovs\tr6, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tstr\tr0, [r2, #4]\n+\tstr\tr0, [r3, #4]\n \tmovs\tr1, r1\n-\tstr\tr2, [r2, #4]\n+\tstr\tr2, [r3, #4]\n \tmovs\tr1, r1\n-\tstr\tr4, [r5, #4]\n+\tstr\tr4, [r6, #4]\n \tmovs\tr1, r1\n-\tstr\tr2, [r6, #4]\n+\tstr\tr2, [r7, #4]\n \tmovs\tr1, r1\n-\tstr\tr4, [r7, #4]\n+\tstr\tr4, [r0, #8]\n \tmovs\tr1, r1\n-\tldrsh\tr2, [r0, r6]\n+\tldrsh\tr2, [r1, r6]\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/stl_deque.h:356\n \tldr\tr3, [r5, #20]\n@@ -1854993,19 +1854993,19 @@\n \tblx\tb700 <__cxa_throw@plt>\n \tnop\n \t...\n \tldr\tr7, [pc, #400]\t@ (38eac4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f0c90>)\n \tmovs\tr4, r2\n \tldr\tr7, [pc, #120]\t@ (38e9b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f0b7c>)\n \tmovs\tr4, r2\n-\tadd\tr6, sp, #704\t@ 0x2c0\n+\tadd\tr6, sp, #752\t@ 0x2f0\n \tmovs\tr5, r0\n-\tadd\tr6, sp, #688\t@ 0x2b0\n+\tadd\tr6, sp, #736\t@ 0x2e0\n \tmovs\tr5, r0\n-\tstmia\tr4!, {r2, r3, r5, r6, r7}\n+\tstmia\tr4!, {r2, r4, r5, r6, r7}\n \tmovs\tr7, r0\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n@@ -1855015,25 +1855015,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr5, sp, #712\t@ 0x2c8\n+\tadd\tr5, sp, #760\t@ 0x2f8\n \tmovs\tr5, r0\n-\tadd\tr5, sp, #664\t@ 0x298\n+\tadd\tr5, sp, #712\t@ 0x2c8\n \tmovs\tr5, r0\n-\tbpl.n\t38ea5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f0c28>\n+\tbpl.n\t38ea6c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f0c38>\n \tmovs\tr7, r0\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n-\tldrsb\tr2, [r7, r7]\n+\tldr\tr2, [r0, r0]\n \tmovs\tr1, r1\n-\tldrsb\tr0, [r4, r3]\n+\tldrsb\tr0, [r5, r3]\n \tmovs\tr1, r1\n ./src/mira/../../src/io/fasta.H:79\n \tldr.w\tr5, [fp, #780]\t@ 0x30c\n /usr/include/c++/10/bits/stl_vector.h:98\n \tadd\tr4, sp, #112\t@ 0x70\n \tmovs\tr6, #0\n \tvstr\td8, [sp, #112]\t@ 0x70\n@@ -1855723,29 +1855723,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr0, sp, #688\t@ 0x2b0\n+\tadd\tr0, sp, #736\t@ 0x2e0\n \tmovs\tr5, r0\n-\tadd\tr0, sp, #672\t@ 0x2a0\n+\tadd\tr0, sp, #720\t@ 0x2d0\n \tmovs\tr5, r0\n-\tbkpt\t0x00e8\n+\tbkpt\t0x00f0\n \tmovs\tr7, r0\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr4, [r5, #25]\n+\tldrb\tr0, [r7, #25]\n \tmovs\tr5, r0\n-\tldrb\tr2, [r5, #25]\n+\tldrb\tr6, [r6, #25]\n \tmovs\tr5, r0\n \tlsrs\tr4, r1, #10\n \tmovs\tr0, r0\n \tbx\tsl\n \tmovs\tr4, r2\n \tldr\tr2, [r6, #124]\t@ 0x7c\n \tmovs\tr5, r0\n@@ -1856331,21 +1856331,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #24\n \tmovs\tr0, r0\n \tcmp\tr8, sp\n \tmovs\tr4, r2\n \tldr\tr6, [r1, #80]\t@ 0x50\n \tmovs\tr5, r0\n-\tldr\tr6, [pc, #584]\t@ (38f548 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1714>)\n+\tldr\tr6, [pc, #616]\t@ (38f568 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1734>)\n \tmovs\tr1, r1\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tldr\tr6, [pc, #592]\t@ (38f558 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1724>)\n+\tldr\tr6, [pc, #624]\t@ (38f578 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1744>)\n \tmovs\tr1, r1\n-\tmovt\tr0, #16389\t@ 0x4005\n+\t\t\t@ instruction: 0xf2d00005\n \tmuls\tr0, r3\n \tmovs\tr4, r2\n ReadPoolIO::loadNextSeqs(unsigned long long, unsigned long long, unsigned long long):\n ./src/mira/readpool_io.C:404\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r2\n \tldr\tr5, [pc, #644]\t@ (38f59c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1768>)\n@@ -1856709,17 +1856709,17 @@\n \tmovs\tr1, r2\n \tbge.n\t38f554 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1720>\n \tmovs\tr1, r2\n \tbge.n\t38f508 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f16d4>\n \tmovs\tr1, r2\n \tbge.n\t38f6b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1884>\n \tmovs\tr1, r2\n-\tldr\tr4, [pc, #144]\t@ (38f654 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1820>)\n+\tldr\tr4, [pc, #176]\t@ (38f674 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f1840>)\n \tmovs\tr1, r1\n-\tldr\tr4, [pc, #32]\t@ (38f5e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f17b4>)\n+\tldr\tr4, [pc, #64]\t@ (38f608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f17d4>)\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n ReadPoolIO::kseq_read(ReadPoolIO::kseq_t*):\n ./src/mira/../../src/mira/readpool_io.H:53\n@@ -1859703,23 +1859703,23 @@\n \tmovs\tr0, #100\t@ 0x64\n \tblx\tbe10 \n \tnop\n \tstmia\tr1!, {r2, r3}\n \tmovs\tr1, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [r5, #32]\n+\tstr\tr6, [r6, #32]\n \tmovs\tr0, r1\n-\tadds\tr3, #30\n+\tadds\tr3, #38\t@ 0x26\n \tmovs\tr1, r1\n-\tldrb\tr2, [r0, #15]\n+\tldrb\tr2, [r1, #15]\n \tmovs\tr6, r0\n-\tldrsb\tr0, [r0, r4]\n+\tldrsb\tr4, [r1, r4]\n \tmovs\tr5, r0\n-\tadds\tr2, #232\t@ 0xe8\n+\tadds\tr2, #240\t@ 0xf0\n \tmovs\tr1, r1\n SAMCollect::getSAMRInfo(std::__cxx11::basic_string, std::allocator > const&, SAMCollect::samrinfo_t&) const:\n ./src/mira/sam_collect.C:516\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r1\n \tmov\tr9, r0\n /usr/include/c++/10/bits/functional_hash.h:197\n@@ -1860274,17 +1860274,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr7, #134\t@ 0x86\n+\tcmp\tr7, #142\t@ 0x8e\n \tmovs\tr1, r1\n-\tcmp\tr7, #138\t@ 0x8a\n+\tcmp\tr7, #146\t@ 0x92\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SAMCollect::createSAMHeader():\n ./src/mira/sam_collect.C:492\n@@ -1860838,17 +1860838,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n-\tcmp\tr5, #174\t@ 0xae\n+\tcmp\tr5, #182\t@ 0xb6\n \tmovs\tr1, r1\n-\tcmp\tr5, #180\t@ 0xb4\n+\tcmp\tr5, #188\t@ 0xbc\n \tmovs\tr1, r1\n \tcbnz\tr4, 391710 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f38dc>\n \tmovs\tr1, r2\n std::pair, std::allocator > const, unsigned int>, false, true>, bool> std::_Hashtable, std::allocator >, std::pair, std::allocator > const, unsigned int>, std::allocator, std::allocator > const, unsigned int> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_emplace, std::allocator >, unsigned int> >(std::integral_constant, std::pair, std::allocator >, unsigned int>&&) [clone .isra.0]:\n /usr/include/c++/10/bits/hashtable.h:1667\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n@@ -1864198,15 +1864198,15 @@\n \tmovs\tr4, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb814\n+\t\t\t@ instruction: 0xb81c\n \tmovs\tr6, r0\n \tlsrs\tr2, r1, #27\n \tmovs\tr4, r2\n \tlsrs\tr6, r4, #26\n \tmovs\tr4, r2\n \tlsrs\tr6, r2, #26\n \tmovs\tr4, r2\n@@ -1864220,15 +1864220,15 @@\n \tmovs\tr4, r2\n \tlsrs\tr6, r0, #25\n \tmovs\tr4, r2\n \tlsrs\tr0, r1, #24\n \tmovs\tr4, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadds\tr2, r4, r3\n+\tadds\tr2, r5, r3\n \tmovs\tr1, r1\n \tlsrs\tr6, r0, #11\n \tmovs\tr4, r2\n \tlsrs\tr2, r5, #4\n \tmovs\tr4, r2\n \tldr\tr1, [sp, #24]\n \tmovw\tr2, #43691\t@ 0xaaab\n@@ -1866018,25 +1866018,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldr\tr7, [sp, #704]\t@ 0x2c0\n \tmovs\tr1, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tasrs\tr0, r1, #14\n+\tasrs\tr0, r2, #14\n \tmovs\tr1, r1\n-\tasrs\tr4, r7, #7\n+\tasrs\tr4, r0, #8\n \tmovs\tr1, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tasrs\tr6, r0, #11\n+\tasrs\tr6, r1, #11\n \tmovs\tr1, r1\n-\tasrs\tr6, r3, #4\n+\tasrs\tr6, r4, #4\n \tmovs\tr1, r1\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tadd\tr6, sp, #448\t@ 0x1c0\n \tmovs\tr1, r2\n \tadd\tr6, sp, #208\t@ 0xd0\n \tmovs\tr1, r2\n@@ -1866050,15 +1866050,15 @@\n \tmovs\tr1, r2\n \tadd\tr5, sp, #72\t@ 0x48\n \tmovs\tr1, r2\n \tlsls\tr4, r0, #10\n \tmovs\tr4, r2\n \tadd\tr4, sp, #800\t@ 0x320\n \tmovs\tr1, r2\n-\tcmp\tip, r9\n+\tcmp\tip, sl\n \tmovs\tr0, r1\n \tadd\tr4, sp, #536\t@ 0x218\n \tmovs\tr1, r2\n \tadd\tr4, sp, #296\t@ 0x128\n \tmovs\tr1, r2\n \tadd\tr4, sp, #56\t@ 0x38\n \tmovs\tr1, r2\n@@ -1867142,123 +1867142,123 @@\n /usr/include/boost/algorithm/string/detail/classification.hpp:227\n \tb.n\t3942c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f6494>\n \tb.n\t3942d2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f649e>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t3942e6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f64b2>\n \tb.n\t39429a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f6466>\n \tnop\n-\tlsls\tr4, r6, #29\n+\tlsls\tr4, r7, #29\n \tmovs\tr1, r1\n-\tlsls\tr0, r5, #23\n+\tlsls\tr0, r6, #23\n \tmovs\tr1, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tlsrs\tr4, r5, #3\n+\tlsrs\tr4, r6, #3\n \tmovs\tr1, r1\n \tmovs\tr1, #36\t@ 0x24\n \tmovs\tr5, r0\n-\tlsrs\tr2, r7, #1\n+\tlsrs\tr2, r0, #2\n \tmovs\tr1, r1\n-\tlsrs\tr6, r0, #2\n+\tlsrs\tr6, r1, #2\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr2, r6, #22\n+\tlsls\tr2, r7, #22\n \tmovs\tr1, r1\n-\tlsls\tr0, r6, #22\n+\tlsls\tr0, r7, #22\n \tmovs\tr1, r1\n-\tldr\tr3, [pc, #232]\t@ (39457c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f6748>)\n+\tldr\tr3, [pc, #264]\t@ (39459c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f6768>)\n \tmovs\tr7, r0\n-\tlsls\tr6, r1, #22\n+\tlsls\tr6, r2, #22\n \tmovs\tr1, r1\n-\tlsls\tr0, r1, #21\n+\tlsls\tr0, r2, #21\n \tmovs\tr1, r1\n-\tlsls\tr4, r0, #21\n+\tlsls\tr4, r1, #21\n \tmovs\tr1, r1\n-\tldr\tr2, [pc, #824]\t@ (3947dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f69a8>)\n+\tldr\tr2, [pc, #856]\t@ (3947fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f69c8>)\n \tmovs\tr7, r0\n-\tlsls\tr2, r4, #20\n+\tlsls\tr2, r5, #20\n \tmovs\tr1, r1\n-\tlsls\tr6, r2, #21\n+\tlsls\tr6, r3, #21\n \tmovs\tr1, r1\n-\tlsls\tr6, r0, #19\n+\tlsls\tr6, r1, #19\n \tmovs\tr1, r1\n-\tlsls\tr2, r0, #19\n+\tlsls\tr2, r1, #19\n \tmovs\tr1, r1\n-\tldr\tr2, [pc, #304]\t@ (3945e8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f67b4>)\n+\tldr\tr2, [pc, #336]\t@ (394608 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f67d4>)\n \tmovs\tr7, r0\n-\tlsls\tr2, r4, #18\n+\tlsls\tr2, r5, #18\n \tmovs\tr1, r1\n-\tadds\tr2, #18\n+\tadds\tr2, #26\n \tmovs\tr0, r1\n-\tadds\tr2, #70\t@ 0x46\n+\tadds\tr2, #78\t@ 0x4e\n \tmovs\tr0, r1\n-\tlsls\tr6, r1, #14\n+\tlsls\tr6, r2, #14\n \tmovs\tr1, r1\n-\tlsls\tr4, r3, #20\n+\tlsls\tr4, r4, #20\n \tmovs\tr1, r1\n-\tlsls\tr0, r1, #19\n+\tlsls\tr0, r2, #19\n \tmovs\tr1, r1\n-\tadds\tr1, #92\t@ 0x5c\n+\tadds\tr1, #100\t@ 0x64\n \tmovs\tr0, r1\n-\tadds\tr1, #80\t@ 0x50\n+\tadds\tr1, #88\t@ 0x58\n \tmovs\tr0, r1\n-\tlsls\tr6, r2, #11\n+\tlsls\tr6, r3, #11\n \tmovs\tr1, r1\n-\tlsls\tr2, r2, #22\n+\tlsls\tr2, r3, #22\n \tmovs\tr1, r1\n-\tlsls\tr2, r7, #21\n+\tlsls\tr2, r0, #22\n \tmovs\tr1, r1\n-\tlsls\tr4, r4, #11\n+\tlsls\tr4, r5, #11\n \tmovs\tr1, r1\n-\tlsls\tr2, r4, #11\n+\tlsls\tr2, r5, #11\n \tmovs\tr1, r1\n-\tldr\tr0, [pc, #424]\t@ (394698 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f6864>)\n+\tldr\tr0, [pc, #456]\t@ (3946b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f6884>)\n \tmovs\tr7, r0\n-\tlsls\tr6, r7, #10\n+\tlsls\tr6, r0, #11\n \tmovs\tr1, r1\n-\tlsls\tr4, r6, #8\n+\tlsls\tr4, r7, #8\n \tmovs\tr1, r1\n-\tlsls\tr2, r4, #9\n+\tlsls\tr2, r5, #9\n \tmovs\tr1, r1\n-\tlsls\tr6, r3, #9\n+\tlsls\tr6, r4, #9\n \tmovs\tr1, r1\n-\tblx\tsp\n+\tblx\tlr\n \tmovs\tr7, r0\n-\tlsls\tr6, r7, #8\n+\tlsls\tr6, r0, #9\n \tmovs\tr1, r1\n-\tlsls\tr2, r5, #13\n+\tlsls\tr2, r6, #13\n \tmovs\tr1, r1\n-\tlsls\tr0, r1, #22\n+\tlsls\tr0, r2, #22\n \tmovs\tr1, r1\n-\tlsls\tr0, r5, #4\n+\tlsls\tr0, r6, #4\n \tmovs\tr1, r1\n-\tlsls\tr0, r4, #8\n+\tlsls\tr0, r5, #8\n \tmovs\tr1, r1\n \tadds\tr6, r2, #2\n \tmovs\tr5, r0\n \tadds\tr6, r1, #2\n \tmovs\tr5, r0\n-\tlsls\tr6, r4, #11\n+\tlsls\tr6, r5, #11\n \tmovs\tr1, r1\n-\tlsls\tr6, r7, #4\n+\tlsls\tr6, r0, #5\n \tmovs\tr1, r1\n-\tlsls\tr2, r7, #4\n+\tlsls\tr2, r0, #5\n \tmovs\tr1, r1\n-\tmov\tlr, r8\n+\tmov\tlr, r9\n \tmovs\tr7, r0\n-\tlsls\tr6, r3, #4\n+\tlsls\tr6, r4, #4\n \tmovs\tr1, r1\n-\tlsls\tr4, r1, #11\n+\tlsls\tr4, r2, #11\n \tmovs\tr1, r1\n-\tlsls\tr2, r1, #10\n+\tlsls\tr2, r2, #10\n \tmovs\tr1, r1\n-\tlsls\tr2, r4, #11\n+\tlsls\tr2, r5, #11\n \tmovs\tr1, r1\n SAMCollect::processSAMRIs():\n ./src/mira/sam_collect.C:62\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr1, [pc, #3220]\t@ 3951dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f73a8>\n \tsub\tsp, #284\t@ 0x11c\n@@ -1868811,19 +1868811,19 @@\n \tmovs\tr1, r2\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r7, #14]\n \tmovs\tr1, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsls\tr4, r3, #5\n+\tlsls\tr4, r4, #5\n \tmovs\tr1, r1\n \tlsrs\tr0, r7, #11\n \tmovs\tr0, r0\n-\tldrb\tr6, [r3, #19]\n+\tldrb\tr6, [r4, #19]\n \tmovs\tr6, r0\n \tstrh\tr4, [r1, #22]\n \tmovs\tr1, r2\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n@@ -1868831,17 +1868831,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr??.w\tr0, [sl, #8]\n-\tldr.w\tr0, [r4, #8]\n-\tldr.w\tr0, [r2, #8]\n+\tldr??.w\tr0, [r2, #8]\n+\tldr.w\tr0, [ip, #8]\n+\tldr.w\tr0, [sl, #8]\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/ostream:611\n@@ -1870295,40 +1870295,40 @@\n \tbne.w\t3954b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f7680>\n \tldrsb.w\tr6, [r1, #300]\t@ 0x12c\n \tadd.w\tr1, r1, #320\t@ 0x140\n \tcmp\tr6, #0\n \tbeq.n\t395e16 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f7fe2>\n \tb.w\t3954b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f7680>\n \t...\n-\t\t\t@ instruction: 0xf52a0008\n-\tlsls\tr6, r5, #3\n+\t\t\t@ instruction: 0xf5320008\n+\tlsls\tr6, r6, #3\n \tmovs\tr0, r1\n-\t\t\t@ instruction: 0xf4fe0008\n-\t\t\t@ instruction: 0xf4f20008\n+\tadd.w\tr0, r6, #8912896\t@ 0x880000\n+\t\t\t@ instruction: 0xf4fa0008\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstc\t0, cr0, [lr], {8}\n-\tadcs.w\tr0, r4, r8\n+\tldc\t0, cr0, [r6], {8}\n+\tadcs.w\tr0, ip, r8\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr0, #134\t@ 0x86\n+\tsubs\tr0, #146\t@ 0x92\n \tmovs\tr5, r0\n-\tsubs\tr0, #122\t@ 0x7a\n+\tsubs\tr0, #134\t@ 0x86\n \tmovs\tr5, r0\n-\tstr\tr2, [r1, #4]\n+\tstr\tr2, [r2, #4]\n \tmovs\tr7, r0\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tbne.w\t395ff4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f81c0>\n \tsubs\tr7, r4, r3\n \tlsrs\tr6, r7, #3\n \tmul.w\tr6, r1, r6\n@@ -1870914,27 +1870914,27 @@\n \tldr.w\tr6, [r5, #-12]\n \tldr\tr2, [sp, #8]\n \tadd\tr6, fp\n \tstr\tr5, [sp, #72]\t@ 0x48\n \tstr.w\tr2, [r6, #-208]\n \tb.n\t3963a2 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f856e>\n \tb.n\t396428 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f85f4>\n-\tb.n\t3963ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f85b8>\n+\tb.n\t3963fc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f85c8>\n \tmovs\tr0, r1\n-\tadds\tr0, #58\t@ 0x3a\n+\tadds\tr0, #66\t@ 0x42\n \tmovs\tr6, r0\n-\tb.n\t396460 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f862c>\n+\tb.n\t396470 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f863c>\n \tmovs\tr0, r1\n-\tlsrs\tr2, r6, #4\n+\tlsrs\tr6, r7, #4\n \tmovs\tr5, r0\n-\tb.n\t395e48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f8014>\n+\tb.n\t395e58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f8024>\n \tmovs\tr0, r1\n-\tb.n\t395e20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f7fec>\n+\tb.n\t395e30 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f7ffc>\n \tmovs\tr0, r1\n-\tb.n\t396c08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f8dd4>\n+\tb.n\t396c18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1f8de4>\n \tmovs\tr0, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SAMCollect::processMAF(std::__cxx11::basic_string, std::allocator > const&):\n ./src/mira/sam_collect.C:51\n@@ -1881466,15 +1881466,15 @@\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t39c1dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1fe3a8>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (39c27c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1fe448>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tadd\tr1, sp, #704\t@ 0x2c0\n+\tadd\tr1, sp, #752\t@ 0x2f0\n \tmovs\tr4, r0\n void std::__unguarded_linear_insert<__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter >(__gnu_cxx::__normal_iterator > >, __gnu_cxx::__ops::_Val_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:1819\n \tldr\tr2, [pc, #148]\t@ (39c318 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1fe4e4>)\n /usr/include/c++/10/bits/stl_algo.h:1823\n \tmov\tip, r0\n /usr/include/c++/10/bits/stl_algo.h:1819\n@@ -1884544,15 +1884544,15 @@\n \tmovw\tr7, #65512\t@ 0xffe8\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t39d9ba , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ffb86>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (39da58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1ffc24>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstr\tr1, [sp, #840]\t@ 0x348\n+\tstr\tr1, [sp, #888]\t@ 0x378\n \tmovs\tr4, r0\n void std::__push_heap<__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse > >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, int, int, std::pair, __gnu_cxx::__ops::_Iter_comp_val<__gnu_parallel::_LexicographicReverse >&):\n /usr/include/c++/10/bits/stl_heap.h:134\n \tsub\tsp, #8\n /usr/include/c++/10/bits/stl_heap.h:139\n \tcmp\tr1, r2\n /usr/include/c++/10/bits/stl_heap.h:134\n@@ -1885199,15 +1885199,15 @@\n \tstmia.w\tsl, {r0, r1, r2}\n \tb.n\t39de10 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x1fffdc>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #8]\t@ (39dfb8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x200184>)\n \tadd\tr0, pc\n \tblx\tb6dc \n \tnop\n-\tldrh\tr4, [r6, #34]\t@ 0x22\n+\tldrh\tr0, [r0, #36]\t@ 0x24\n \tmovs\tr4, r0\n void std::__move_median_to_first >(SAMCollect::samrinfo_t*, SAMCollect::samrinfo_t*, SAMCollect::samrinfo_t*, SAMCollect::samrinfo_t*, __gnu_cxx::__ops::_Iter_comp_iter):\n /usr/include/c++/10/bits/stl_algo.h:79\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r1\n \tmov\tr6, r3\n \tsub\tsp, #40\t@ 0x28\n@@ -1920035,23 +1920035,23 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tldmia\tr0!, {r2, r4, r6}\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr4, r7\n+\tasrs\tr4, r0\n \tmovs\tr7, r0\n-\tlsrs\tr6, r7\n+\tasrs\tr6, r0\n \tmovs\tr7, r0\n-\tldr\tr1, [pc, #48]\t@ (3b0820 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2129ec>)\n+\tldr\tr1, [pc, #80]\t@ (3b0840 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x212a0c>)\n \tmovs\tr5, r0\n-\tlsls\tr0, r6\n+\tlsls\tr0, r7\n \tmovs\tr7, r0\n-\tlsls\tr2, r4\n+\tlsls\tr2, r5\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::pair, std::allocator > const, unsigned int>, false, true>, bool> std::_Hashtable, std::allocator >, std::pair, std::allocator > const, unsigned int>, std::allocator, std::allocator > const, unsigned int> >, std::__detail::_Select1st, std::equal_to, std::allocator > >, std::hash, std::allocator > >, std::__detail::_Mod_range_hashing, std::__detail::_Default_ranged_hash, std::__detail::_Prime_rehash_policy, std::__detail::_Hashtable_traits >::_M_emplace, std::allocator >, unsigned int> >(std::integral_constant, std::pair, std::allocator >, unsigned int>&&):\n /usr/include/c++/10/bits/hashtable.h:1667\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r2\n@@ -1921255,17 +1921255,17 @@\n \t...\n \tstmia\tr5!, {r3, r4, r7}\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstmia\tr5!, {r2, r3, r4, r5, r6}\n \tmovs\tr7, r1\n-\tsubs\tr5, #242\t@ 0xf2\n+\tsubs\tr5, #250\t@ 0xfa\n \tmovs\tr7, r0\n-\tsubs\tr6, #100\t@ 0x64\n+\tsubs\tr6, #108\t@ 0x6c\n \tmovs\tr7, r0\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tstmia\tr3!, {r4, r5, r6, r7}\n \tmovs\tr7, r1\n@@ -1921277,31 +1921277,31 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r0, #0]\n+\tldrh\tr0, [r2, #0]\n \tmovs\tr3, r0\n-\tldrh\tr0, [r0, #0]\n+\tldrh\tr4, [r1, #0]\n \tmovs\tr3, r0\n-\tldr\tr6, [sp, #256]\t@ 0x100\n+\tldr\tr6, [sp, #288]\t@ 0x120\n \tmovs\tr5, r0\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrh\tr6, [r5, #54]\t@ 0x36\n+\tstrh\tr2, [r7, #54]\t@ 0x36\n \tmovs\tr3, r0\n-\tstrh\tr2, [r4, #54]\t@ 0x36\n+\tstrh\tr6, [r5, #54]\t@ 0x36\n \tmovs\tr3, r0\n-\tadd\tr6, sp, #704\t@ 0x2c0\n+\tadd\tr6, sp, #736\t@ 0x2e0\n \tmovs\tr5, r0\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n Scaffolder::storeInfoFreshContig(Contig&):\n ./src/mira/scaffolder.C:149\n \tmovs\tr3, #1\n ./src/mira/scaffolder.C:159\n@@ -1923040,87 +1923040,87 @@\n /usr/include/c++/10/bits/basic_ios.h:282\n \tmov\tr0, r8\n \tadd.w\tr2, sl, #8\n \tstr\tr2, [sp, #168]\t@ 0xa8\n \tblx\tb844 \n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \t...\n-\tadds\tr7, #192\t@ 0xc0\n+\tadds\tr7, #200\t@ 0xc8\n \tmovs\tr5, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tcmp\tr3, #102\t@ 0x66\n+\tcmp\tr3, #110\t@ 0x6e\n \tmovs\tr7, r0\n-\tadds\tr7, #36\t@ 0x24\n+\tadds\tr7, #44\t@ 0x2c\n \tmovs\tr7, r0\n-\tadds\tr7, #22\n+\tadds\tr7, #30\n \tmovs\tr7, r0\n-\tsubs\tr7, #80\t@ 0x50\n+\tsubs\tr7, #88\t@ 0x58\n \tmovs\tr5, r0\n-\tadds\tr6, #242\t@ 0xf2\n+\tadds\tr6, #250\t@ 0xfa\n \tmovs\tr7, r0\n-\tadds\tr6, #226\t@ 0xe2\n+\tadds\tr6, #234\t@ 0xea\n \tmovs\tr7, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr5, #126\t@ 0x7e\n+\tadds\tr5, #134\t@ 0x86\n \tmovs\tr7, r0\n-\teors\tr0, r4\n+\teors\tr0, r5\n \tmovs\tr6, r0\n-\tadds\tr5, #82\t@ 0x52\n+\tadds\tr5, #90\t@ 0x5a\n \tmovs\tr7, r0\n-\tadds\tr5, #62\t@ 0x3e\n+\tadds\tr5, #70\t@ 0x46\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tadds\tr4, #238\t@ 0xee\n+\tadds\tr4, #246\t@ 0xf6\n \tmovs\tr7, r0\n-\tadds\tr4, #106\t@ 0x6a\n+\tadds\tr4, #114\t@ 0x72\n \tmovs\tr5, r0\n-\tcmp\tr0, #40\t@ 0x28\n+\tcmp\tr0, #48\t@ 0x30\n \tmovs\tr7, r0\n-\tadds\tr3, #230\t@ 0xe6\n+\tadds\tr3, #238\t@ 0xee\n \tmovs\tr7, r0\n-\tadds\tr3, #216\t@ 0xd8\n+\tadds\tr3, #224\t@ 0xe0\n \tmovs\tr7, r0\n-\tsubs\tr4, #18\n+\tsubs\tr4, #26\n \tmovs\tr5, r0\n-\tadds\tr3, #180\t@ 0xb4\n+\tadds\tr3, #188\t@ 0xbc\n \tmovs\tr7, r0\n-\tadds\tr3, #164\t@ 0xa4\n+\tadds\tr3, #172\t@ 0xac\n \tmovs\tr7, r0\n-\tldrb\tr6, [r4, #30]\n+\tldrb\tr2, [r6, #30]\n \tmovs\tr3, r0\n-\tldrb\tr0, [r3, #30]\n+\tldrb\tr4, [r4, #30]\n \tmovs\tr3, r0\n-\tadd\tr7, pc, #400\t@ (adr r7, 3b1c80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x213e4c>)\n+\tadd\tr7, pc, #432\t@ (adr r7, 3b1ca0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x213e6c>)\n \tmovs\tr5, r0\n \tlsrs\tr0, r1, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstrb\tr2, [r3, r0]\n+\tstrb\tr6, [r4, r0]\n \tmovs\tr3, r0\n-\tstrb\tr6, [r2, r0]\n+\tstrb\tr2, [r4, r0]\n \tmovs\tr3, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n-\tstrh\tr0, [r1, r3]\n+\tstrh\tr4, [r2, r3]\n \tmovs\tr3, r0\n-\tstrh\tr6, [r0, r3]\n+\tstrh\tr2, [r2, r3]\n \tmovs\tr3, r0\n \tmvns\tr4, r4\n \tmovs\tr3, r0\n StringContainer::getEntry[abi:cxx11](StringContainer::Entry) const:\n ./src/mira/../../src/mira/stringcontainer.H:116\n \tmov\tr0, r6\n \tblx\tbb08 , std::allocator >::~basic_ostringstream()@plt>\n@@ -1924242,15 +1924242,15 @@\n \tmovw\tr7, #65528\t@ 0xfff8\n \tmovt\tr7, #32767\t@ 0x7fff\n \tb.n\t3b20a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x214270>\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (3b20cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x214298>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tstrb\tr2, [r1, #18]\n+\tstrb\tr6, [r2, #18]\n \tmovs\tr3, r0\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, Scaffolder::readlinkinfo_t const&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n std::vector >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4160749568\t@ 0xf8000000\n@@ -1924525,15 +1924525,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t3b2156 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x214322>\n std::vector >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (3b22b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21447c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr1, [pc, #488]\t@ (3b249c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x214668>)\n+\tldr\tr1, [pc, #536]\t@ (3b24cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x214698>)\n \tmovs\tr3, r0\n void std::vector >::_M_realloc_insert(__gnu_cxx::__normal_iterator > >, Scaffolder::readlinkinfo_t const&):\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n std::__detail::_Hash_node_base::_Hash_node_base():\n /usr/include/c++/10/bits/hashtable_policy.h:218\n \tmovs\tr2, #0\n@@ -1924899,31 +1924899,31 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tadd\tr3, sp, #824\t@ 0x338\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr6, #74\t@ 0x4a\n+\tmovs\tr6, #82\t@ 0x52\n \tmovs\tr7, r0\n-\tmovs\tr6, #68\t@ 0x44\n+\tmovs\tr6, #76\t@ 0x4c\n \tmovs\tr7, r0\n-\trors\tr0, r2\n+\trors\tr4, r3\n \tmovs\tr3, r0\n \tadd\tr3, sp, #312\t@ 0x138\n \tmovs\tr7, r1\n-\tmovs\tr5, #140\t@ 0x8c\n+\tmovs\tr5, #148\t@ 0x94\n \tmovs\tr7, r0\n-\tmovs\tr5, #156\t@ 0x9c\n+\tmovs\tr5, #164\t@ 0xa4\n \tmovs\tr7, r0\n-\tmovs\tr5, #114\t@ 0x72\n+\tmovs\tr5, #122\t@ 0x7a\n \tmovs\tr7, r0\n-\tmovs\tr5, #112\t@ 0x70\n+\tmovs\tr5, #120\t@ 0x78\n \tmovs\tr7, r0\n-\tmovs\tr5, #106\t@ 0x6a\n+\tmovs\tr5, #114\t@ 0x72\n \tmovs\tr7, r0\n operator<<(std::ostream&, Warnings const&):\n ./src/mira/warnings.C:99\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr7, r0\n \tmov\tr6, r1\n ./src/mira/warnings.C:102\n@@ -1925878,23 +1925878,23 @@\n \t...\n \tadd\tr1, sp, #880\t@ 0x370\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tadd\tr1, sp, #784\t@ 0x310\n \tmovs\tr7, r1\n-\tmovs\tr4, #104\t@ 0x68\n+\tmovs\tr4, #112\t@ 0x70\n \tmovs\tr7, r0\n-\tmovs\tr4, #90\t@ 0x5a\n+\tmovs\tr4, #98\t@ 0x62\n \tmovs\tr7, r0\n-\tmovs\tr4, #104\t@ 0x68\n+\tmovs\tr4, #112\t@ 0x70\n \tmovs\tr7, r0\n-\tstr\tr4, [r6, #0]\n+\tstr\tr4, [r7, #0]\n \tmovs\tr4, r0\n-\tldrb\tr6, [r7, #12]\n+\tldrb\tr6, [r0, #13]\n \tmovs\tr6, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #23\n \tmovs\tr0, r0\n@@ -1925902,41 +1925902,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tadd\tr7, pc, #288\t@ (adr r7, 3b2bdc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x214da8>)\n \tmovs\tr7, r1\n-\tmovs\tr1, #150\t@ 0x96\n+\tmovs\tr1, #158\t@ 0x9e\n \tmovs\tr7, r0\n-\tstr\tr4, [r3, #36]\t@ 0x24\n+\tstr\tr0, [r5, #36]\t@ 0x24\n \tmovs\tr3, r0\n-\tstr\tr4, [r2, #36]\t@ 0x24\n+\tstr\tr0, [r4, #36]\t@ 0x24\n \tmovs\tr3, r0\n-\tstr\tr4, [r1, #36]\t@ 0x24\n+\tstr\tr0, [r3, #36]\t@ 0x24\n \tmovs\tr3, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr1, #26\n+\tmovs\tr1, #34\t@ 0x22\n \tmovs\tr7, r0\n-\tldr\tr2, [r0, #80]\t@ 0x50\n+\tldr\tr2, [r1, #80]\t@ 0x50\n \tmovs\tr5, r0\n-\tmovs\tr0, #238\t@ 0xee\n+\tmovs\tr0, #246\t@ 0xf6\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tadds\tr4, #46\t@ 0x2e\n \tmovs\tr3, r0\n-\tstr\tr2, [r5, #16]\n+\tstr\tr6, [r6, #16]\n \tmovs\tr3, r0\n Warnings::priv_setWarning(std::__cxx11::basic_string, std::allocator >&, unsigned int, std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&, bool, bool):\n ./src/mira/warnings.C:79\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tsl, r3\n \tldr.w\tr5, [pc, #1612]\t@ 3b3148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215314>\n \tsub\tsp, #284\t@ 0x11c\n@@ -1927228,17 +1927228,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr0, r0, r5\n+\tsubs\tr0, r1, r5\n \tmovs\tr7, r0\n-\tsubs\tr0, r4, r4\n+\tsubs\tr0, r5, r4\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tcmp\tr5, #64\t@ 0x40\n \tmovs\tr3, r0\n@@ -1928520,17 +1928520,17 @@\n \tmov\tr0, r5\n \tldr\tr1, [pc, #12]\t@ (3b3928 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215af4>)\n \tldr\tr2, [r3, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n \tb.n\t3b383a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215a06>\n \tnop\n-\tasrs\tr2, r6, #8\n+\tasrs\tr2, r7, #8\n \tmovs\tr7, r0\n-\tasrs\tr0, r4, #8\n+\tasrs\tr0, r5, #8\n \tmovs\tr7, r0\n MPFlexLexer::yy_switch_to_buffer(yy_buffer_state*):\n ./src/mira/parameters_flexer.cc:8175\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n ./src/mira/parameters_flexer.cc:8386\n \tldr.w\tr0, [r0, #348]\t@ 0x15c\n@@ -1928658,17 +1928658,17 @@\n \tldr\tr1, [pc, #16]\t@ (3b3a20 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215bec>)\n \tldr\tr3, [r6, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr3\n ./src/mira/parameters_flexer.cc:8399\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3b39e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215bb0>\n-\tasrs\tr0, r5, #5\n+\tasrs\tr0, r6, #5\n \tmovs\tr7, r0\n-\tasrs\tr6, r2, #5\n+\tasrs\tr6, r3, #5\n \tmovs\tr7, r0\n MPFlexLexer::yy_create_buffer(std::istream*, int):\n ./src/mira/parameters_flexer.cc:8250\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n ./src/mira/parameters_flexer.cc:8251\n \tldr.w\tr8, [r0]\n \tldr\tr3, [pc, #268]\t@ (3b3b3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215d08>)\n@@ -1928833,17 +1928833,17 @@\n \tmov\tr0, r5\n \tblx\tr3\n ./src/mira/parameters_flexer.cc:8315\n \tldr\tr7, [r4, #4]\n \tb.n\t3b3a5a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215c26>\n \tnop\n \tstc2l\t15, cr15, [pc, #1020]!\t@ 3b3f3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216108>\n-\tasrs\tr0, r3, #32\n+\tasrs\tr0, r4, #32\n \tmovs\tr7, r0\n-\tasrs\tr4, r1, #32\n+\tasrs\tr4, r2, #32\n \tmovs\tr7, r0\n MPFlexLexer::MPFlexLexer(std::istream*, std::ostream*):\n ./src/mira/parameters_flexer.cc:7719\n \tldr\tr3, [pc, #296]\t@ (3b3c74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x215e40>)\n ./src/mira/parameters_flexer.cc:7717\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n@@ -1929701,22 +1929701,22 @@\n \tldr.w\tr3, [r5, r1, lsl #2]\n \tadd.w\tr6, r5, r1, lsl #2\n \tstr\tr7, [r3, #16]\n ./src/mira/parameters_flexer.cc:7939\n \tcmp.w\tr8, #0\n \tbne.w\t3b3ffc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2161c8>\n \tb.n\t3b4082 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21624e>\n-\tlsrs\tr4, r7, #21\n+\tlsrs\tr4, r0, #22\n \tmovs\tr7, r0\n-\tlsrs\tr0, r5, #17\n+\tlsrs\tr0, r6, #17\n \tmovs\tr7, r0\n \tbl\t14224a , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x9e0b2>\n-\tlsrs\tr4, r7, #8\n+\tlsrs\tr4, r0, #9\n \tmovs\tr7, r0\n-\tlsrs\tr6, r2, #8\n+\tlsrs\tr6, r3, #8\n \tmovs\tr7, r0\n MPFlexLexer::yy_get_previous_state():\n ./src/mira/parameters_flexer.cc:7979\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tfp, r0\n ./src/mira/parameters_flexer.cc:7985\n \tldr.w\tr3, [r0, #324]\t@ 0x144\n@@ -1929821,35 +1929821,35 @@\n \tmov\tr2, r1\n \tadd\tr3, r1\n \tldrsh.w\tip, [lr, r3, lsl #1]\n \tcmp\tip, r0\n \tbne.n\t3b42ce , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21649a>\n \tb.n\t3b42ec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2164b8>\n \tnop\n-\tlsrs\tr2, r1, #10\n+\tlsrs\tr2, r2, #10\n \tmovs\tr7, r0\n-\tblt.n\t3b4334 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216500>\n+\tblt.n\t3b4344 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216510>\n \tmovs\tr7, r0\n-\tlsrs\tr4, r3, #15\n+\tlsrs\tr4, r4, #15\n \tmovs\tr7, r0\n-\tblt.n\t3b4330 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2164fc>\n+\tblt.n\t3b4340 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21650c>\n \tmovs\tr7, r0\n-\tlsrs\tr4, r7, #9\n+\tlsrs\tr4, r0, #10\n \tmovs\tr7, r0\n-\tlsrs\tr6, r2, #25\n+\tlsrs\tr6, r3, #25\n \tmovs\tr0, r1\n-\tbge.n\t3b42e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2164b0>\n+\tbge.n\t3b42f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2164c0>\n \tmovs\tr7, r0\n-\tlsrs\tr4, r5, #14\n+\tlsrs\tr4, r6, #14\n \tmovs\tr7, r0\n-\tadd\tr7, pc, #328\t@ (adr r7, 3b4480 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21664c>)\n+\tadd\tr7, pc, #360\t@ (adr r7, 3b44a0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21666c>)\n \tmovs\tr7, r0\n-\tlsrs\tr0, r2, #14\n+\tlsrs\tr0, r3, #14\n \tmovs\tr7, r0\n-\tldr\tr4, [r1, r5]\n+\tldr\tr4, [r2, r5]\n \tmovs\tr7, r0\n MPFlexLexer::yy_try_NUL_trans(int):\n ./src/mira/parameters_flexer.cc:8016\n \tldr\tr3, [pc, #88]\t@ (3b439c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216568>)\n ./src/mira/parameters_flexer.cc:8011\n \tpush\t{lr}\n ./src/mira/parameters_flexer.cc:8016\n@@ -1929889,23 +1929889,23 @@\n \tldrsh.w\tr0, [r0, r3, lsl #1]\n ./src/mira/parameters_flexer.cc:8031\n \tcmp\tr0, r1\n \tit\teq\n \tmoveq\tr0, #0\n \tldr.w\tpc, [sp], #4\n \tnop\n-\tlsrs\tr0, r6, #22\n+\tlsrs\tr0, r7, #22\n \tmovs\tr0, r1\n-\tbge.n\t3b4400 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2165cc>\n+\tbge.n\t3b4410 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2165dc>\n \tmovs\tr7, r0\n-\tlsrs\tr0, r0, #12\n+\tlsrs\tr0, r1, #12\n \tmovs\tr7, r0\n-\tadd\tr6, pc, #688\t@ (adr r6, 3b465c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216828>)\n+\tadd\tr6, pc, #720\t@ (adr r6, 3b467c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216848>)\n \tmovs\tr7, r0\n-\tldr\tr2, [r6, r2]\n+\tldr\tr2, [r7, r2]\n \tmovs\tr7, r0\n MPFlexLexer::yyunput(int, char*):\n ./src/mira/parameters_flexer.cc:8035\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n ./src/mira/parameters_flexer.cc:8038\n \tldr.w\tr7, [r0, #324]\t@ 0x144\n@@ -1929987,15 +1929987,15 @@\n \tldrb.w\tr7, [r1, #-1]!\n \tstrb.w\tr7, [r4, #316]\t@ 0x13c\n ./src/mira/parameters_flexer.cc:8068\n \tstr.w\tr1, [r4, #324]\t@ 0x144\n ./src/mira/parameters_flexer.cc:8069\n \tldmia.w\tsp!, {r3, r4, r5, r6, r7, r8, r9, pc}\n \tnop\n-\tlsrs\tr4, r4, #32\n+\tlsrs\tr4, r5, #32\n \tmovs\tr7, r0\n MPFlexLexer::yyinput():\n ./src/mira/parameters_flexer.cc:8073\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tldr\tr6, [pc, #188]\t@ (3b4514 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2166e0>)\n \tsub\tsp, #8\n@@ -1930095,15 +1930095,15 @@\n \tldr\tr0, [r4, #0]\n \tmov\tr1, r7\n \tldr\tr5, [r0, #28]\n \tmov\tr0, r4\n \tblx\tr5\n \tb.n\t3b4460 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21662c>\n \tnop\n-\tbl\t440516 , std::allocator >@@Base+0x384ca>\n+\tbl\t440516 , std::allocator >@@Base+0x384c2>\n MPFlexLexer::yy_load_buffer_state():\n ./src/mira/parameters_flexer.cc:8206\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n ./src/mira/parameters_flexer.cc:8209\n \tadds\tr0, #40\t@ 0x28\n ./src/mira/parameters_flexer.cc:8207\n@@ -1930442,17 +1930442,17 @@\n \tldr\tr1, [pc, #16]\t@ (3b475c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216928>)\n \tldr\tr2, [r6, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n ./src/mira/parameters_flexer.cc:8399\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3b4722 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2168ee>\n-\tlsls\tr6, r5, #16\n+\tlsls\tr6, r6, #16\n \tmovs\tr7, r0\n-\tlsls\tr2, r3, #16\n+\tlsls\tr2, r4, #16\n \tmovs\tr7, r0\n MPFlexLexer::yypop_buffer_state():\n ./src/mira/parameters_flexer.cc:8365\n \tldr.w\tr3, [r0, #348]\t@ 0x15c\n \tcmp\tr3, #0\n \tbeq.n\t3b47e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2169ac>\n ./src/mira/parameters_flexer.cc:8365 (discriminator 1)\n@@ -1930596,17 +1930596,17 @@\n \tldr\tr1, [pc, #16]\t@ (3b4868 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216a34>)\n \tldr\tr3, [r5, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr3\n ./src/mira/parameters_flexer.cc:8399\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3b4832 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2169fe>\n-\tlsls\tr0, r4, #12\n+\tlsls\tr0, r5, #12\n \tmovs\tr7, r0\n-\tlsls\tr6, r1, #12\n+\tlsls\tr6, r2, #12\n \tmovs\tr7, r0\n MPFlexLexer::yyrestart(std::istream&):\n ./src/mira/parameters_flexer.cc:8145\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n ./src/mira/parameters_flexer.cc:8147\n \tldr.w\tr3, [r0, #348]\t@ 0x15c\n@@ -1930842,15 +1930842,15 @@\n \tldr\tr2, [r3, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n ./src/mira/parameters_flexer.cc:8445\n \tldr\tr0, [r4, #28]\n \tb.n\t3b49d8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216ba4>\n \tnop\n-\tlsls\tr2, r4, #9\n+\tlsls\tr2, r5, #9\n \tmovs\tr7, r0\n MPFlexLexer::yylex():\n ./src/mira/parameters_flexer.cc:4954\n \tldr.w\tr3, [r0, #328]\t@ 0x148\n ./src/mira/parameters_flexer.cc:4949\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n@@ -1932065,39 +1932065,39 @@\n \tmov\tr0, r6\n \tmovs\tr1, #13\n \tbl\t3b49b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216b84>\n \tmovw\tr0, #1002\t@ 0x3ea\n \tb.n\t3b5164 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217330>\n \tstrh\tr4, [r6, #40]\t@ 0x28\n \tmovs\tr7, r1\n-\tlsls\tr4, r7, #10\n+\tlsls\tr4, r0, #11\n \tmovs\tr7, r0\n-\tbcc.n\t3b5444 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217610>\n+\tbcc.n\t3b5454 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217620>\n \tmovs\tr7, r0\n-\tlsls\tr2, r5, #10\n+\tlsls\tr2, r6, #10\n \tmovs\tr7, r0\n-\tbcc.n\t3b5428 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2175f4>\n+\tbcc.n\t3b5438 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217604>\n \tmovs\tr7, r0\n-\tlsls\tr2, r6, #15\n+\tlsls\tr2, r7, #15\n \tmovs\tr7, r0\n-\tbcc.n\t3b5408 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2175d4>\n+\tbcc.n\t3b5418 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2175e4>\n \tmovs\tr7, r0\n-\tlsls\tr6, r7, #25\n+\tlsls\tr6, r0, #26\n \tmovs\tr0, r1\n-\tlsls\tr4, r1, #15\n+\tlsls\tr4, r2, #15\n \tmovs\tr7, r0\n-\tldr\tr7, [sp, #472]\t@ 0x1d8\n+\tldr\tr7, [sp, #504]\t@ 0x1f8\n \tmovs\tr7, r0\n-\tlsls\tr4, r6, #14\n+\tlsls\tr4, r7, #14\n \tmovs\tr7, r0\n-\tstr\tr6, [r4, r5]\n+\tstr\tr6, [r5, r5]\n \tmovs\tr7, r0\n-\tbcs.n\t3b5348 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217514>\n+\tbcs.n\t3b5358 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217524>\n \tmovs\tr7, r0\n-\tlsls\tr6, r0, #24\n+\tlsls\tr6, r1, #24\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #25\n \tmovs\tr0, r0\n \tb.n\t3b4ef8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2170c4>\n \tmovs\tr1, r2\n@@ -1933718,54 +1933718,54 @@\n ./src/mira/parameters_flexer.ll:629\n \tmov\tr0, r6\n \tmovs\tr1, #26\n \tbl\t3b49b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216b84>\n \tmovw\tr0, #7804\t@ 0x1e7c\n \tb.w\t3b5164 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217330>\n \tnop\n-\tstr.w\tr0, [lr, r6]\n+\tldr.w\tr0, [r6, r6]\n \tb.n\t3b6720 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2188ec>\n \tmovs\tr1, r2\n-\t\t\t@ instruction: 0xf7320006\n+\t\t\t@ instruction: 0xf73a0006\n \tb.n\t3b64f0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2186bc>\n \tmovs\tr1, r2\n \tb.n\t3b64c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x218690>\n \tmovs\tr1, r2\n \tb.n\t3b64b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21867c>\n \tmovs\tr1, r2\n-\t\t\t@ instruction: 0xf6e60006\n-\t\t\t@ instruction: 0xf6b80006\n-\t\t\t@ instruction: 0xf68c0006\n-\tadcs.w\tr0, ip, #8781824\t@ 0x860000\n+\t\t\t@ instruction: 0xf6ee0006\n+\tmovt\tr0, #2054\t@ 0x806\n+\t\t\t@ instruction: 0xf6940006\n+\tsbc.w\tr0, r4, #8781824\t@ 0x860000\n \tsvc\t164\t@ 0xa4\n \tmovs\tr1, r2\n \tsvc\t88\t@ 0x58\n \tmovs\tr1, r2\n \tbgt.n\t3b619e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21836a>\n-\tvrsra.u32\t, q1, #1\n+\tvrsra.u32\t, q5, #1\n \tmovs\tr6, r0\n-\t\t\t@ instruction: 0xf13c0006\n+\tadc.w\tr0, r4, #6\n \tblt.n\t3b6134 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x218300>\n \tmovs\tr1, r2\n-\tadd.w\tr0, r6, #6\n+\tadd.w\tr0, lr, #6\n \tblt.n\t3b62d0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21849c>\n \tmovs\tr1, r2\n-\t\t\t@ instruction: 0xf0d00006\n-\t\t\t@ instruction: 0xf0a20006\n-\torns\tr0, r4, #6\n-\torr.w\tr0, r6, #6\n+\t\t\t@ instruction: 0xf0d80006\n+\t\t\t@ instruction: 0xf0aa0006\n+\torns\tr0, ip, #6\n+\torr.w\tr0, lr, #6\n \tbge.n\t3b6340 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21850c>\n \tmovs\tr1, r2\n \tbge.n\t3b6308 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2184d4>\n \tmovs\tr1, r2\n-\tcdp\t0, 11, cr0, cr14, cr6, {0}\n-\tcdp\t0, 9, cr0, cr0, cr6, {0}\n-\tldcl\t0, cr0, [ip], {6}\n-\tldc\t0, cr0, [r0], #24\n-\tstc\t0, cr0, [r4], {6}\n+\tcdp\t0, 12, cr0, cr6, cr6, {0}\n+\tcdp\t0, 9, cr0, cr8, cr6, {0}\n+\tstcl\t0, cr0, [r4], #24\n+\tldc\t0, cr0, [r8], #24\n+\tstc\t0, cr0, [ip], {6}\n ./src/mira/parameters_flexer.ll:627\n \tmov\tr0, r6\n \tmovs\tr1, #26\n \tbl\t3b49b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x216b84>\n \tmovw\tr0, #7803\t@ 0x1e7b\n \tb.w\t3b5164 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217330>\n ./src/mira/parameters_flexer.ll:625\n@@ -1933992,15 +1933992,15 @@\n \tldr\tr3, [r2, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr3\n ./src/mira/parameters_flexer.cc:4988\n \tldr.w\tr2, [r6, #324]\t@ 0x144\n \tb.w\t3b518a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x217356>\n \tnop\n-\t\t\t@ instruction: 0xe8060006\n+\t\t\t@ instruction: 0xe80e0006\n MPFlexLexer::yy_pop_state():\n ./src/mira/parameters_flexer.cc:8452\n \tldr\tr3, [r0, #20]\n ./src/mira/parameters_flexer.cc:8451\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n ./src/mira/parameters_flexer.cc:8452\n@@ -1934020,15 +1934020,15 @@\n \tldr.w\tr2, [r0, r1, lsl #2]\n \tlsls\tr3, r2, #1\n \tadds\tr3, #1\n \tstr.w\tr3, [r4, #332]\t@ 0x14c\n ./src/mira/parameters_flexer.cc:8456\n \tpop\t{r4, pc}\n \tnop\n-\tb.n\t3b647c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x218648>\n+\tb.n\t3b648c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x218658>\n \tmovs\tr6, r0\n MPFlexLexer::yy_top_state():\n ./src/mira/parameters_flexer.cc:8460\n \tldr\tr3, [r0, #20]\n \tldr\tr2, [r0, #28]\n \tadd.w\tr0, r3, #1073741824\t@ 0x40000000\n \tsubs\tr1, r0, #1\n@@ -1934267,19 +1934267,19 @@\n showIntervall(caf_intervall, std::ostream&):\n ./src/caf/caf.C:66\n \tadd\tsp, #8\n \tldmia.w\tsp!, {r4, lr}\n std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*):\n /usr/include/c++/10/ostream:611\n \tb.w\tb994 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt>\n-\tldrb\tr2, [r7, #7]\n+\tldrb\tr2, [r0, #8]\n \tmovs\tr4, r0\n-\tasrs\tr2, r5, #6\n+\tasrs\tr2, r6, #6\n \tmovs\tr5, r0\n-\tldrb\tr0, [r2, #26]\n+\tldrb\tr4, [r3, #26]\n \tmovs\tr3, r0\n showIntervallList(std::__cxx11::list >, std::ostream&):\n ./src/caf/caf.C:70\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r1\n \tldr.w\tsl, [pc, #320]\t@ 3b679c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x218968>\n std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*):\n@@ -1934483,21 +1934483,21 @@\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tldr\tr6, [r7, #12]\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr6, r2, #7\n+\tadds\tr6, r3, #7\n \tmovs\tr0, r1\n-\tldrb\tr4, [r4, #5]\n+\tldrb\tr4, [r5, #5]\n \tmovs\tr4, r0\n-\tasrs\tr6, r4, #4\n+\tasrs\tr6, r5, #4\n \tmovs\tr5, r0\n-\tldrb\tr0, [r3, #23]\n+\tldrb\tr4, [r4, #23]\n \tmovs\tr3, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n schnittmenge(caf_intervall, caf_intervall):\n ./src/caf/caf.C:83\n \tsub\tsp, #8\n \tpush\t{r4}\n@@ -1935754,17 +1935754,17 @@\n std::ctype const& std::__check_facet >(std::ctype const*):\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tstr\tr6, [r1, #32]\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr4, r3, #27\n+\tasrs\tr4, r4, #27\n \tmovs\tr0, r1\n-\tldmia\tr6!, {r1, r3, r4, r5, r7}\n+\tldmia\tr6, {r1, r6, r7}\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n CAF::setProgressIndicator(bool):\n ./src/caf/caf.C:360\n \tpush\t{r3, r4, r5, r6, r7, lr}\n ./src/caf/caf.C:361\n@@ -1936610,17 +1936610,17 @@\n \tmovs\tr0, r0\n \tstr\tr2, [r3, #0]\n \tmovs\tr7, r1\n \tldrsh\tr0, [r0, r0]\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr0, r1, #10\n+\tasrs\tr0, r2, #10\n \tmovs\tr0, r1\n-\tasrs\tr6, r0, #16\n+\tasrs\tr6, r1, #16\n \tmovs\tr4, r0\n operator<<(std::ostream&, CAF const&):\n ./src/caf/caf.C:1702\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r1\n std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*):\n /usr/include/c++/10/ostream:611\n@@ -1937234,51 +1937234,51 @@\n \tldr\tr1, [pc, #84]\t@ (3b7728 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2198f4>)\n \tmovs\tr2, #8\n \tmov\tr0, r4\n \tadd\tr1, pc\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n /usr/include/c++/10/ostream:613\n \tb.n\t3b73c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x219590>\n-\tasrs\tr6, r3, #6\n+\tasrs\tr6, r4, #6\n \tmovs\tr0, r1\n \tldrb\tr4, [r6, r1]\n \tmovs\tr7, r1\n-\tasrs\tr6, r4, #5\n+\tasrs\tr6, r5, #5\n \tmovs\tr0, r1\n-\tasrs\tr4, r7, #4\n+\tasrs\tr4, r0, #5\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tasrs\tr6, r5, #3\n+\tasrs\tr6, r6, #3\n \tmovs\tr0, r1\n-\tasrs\tr2, r7, #3\n+\tasrs\tr2, r0, #4\n \tmovs\tr0, r1\n-\tasrs\tr6, r0, #3\n+\tasrs\tr6, r1, #3\n \tmovs\tr0, r1\n-\tasrs\tr0, r3, #2\n+\tasrs\tr0, r4, #2\n \tmovs\tr0, r1\n-\tasrs\tr2, r5, #1\n+\tasrs\tr2, r6, #1\n \tmovs\tr0, r1\n-\tstmia\tr3!, {r2, r3, r4, r6, r7}\n+\tstmia\tr3!, {r2, r5, r6, r7}\n \tmovs\tr3, r0\n-\tasrs\tr0, r4, #32\n+\tasrs\tr0, r5, #32\n \tmovs\tr0, r1\n-\tstmia\tr3!, {r1, r7}\n+\tstmia\tr3!, {r1, r3, r7}\n \tmovs\tr3, r0\n-\tlsrs\tr4, r3, #31\n+\tlsrs\tr4, r4, #31\n \tmovs\tr0, r1\n-\tstmia\tr3!, {r1, r2, r3, r5}\n+\tstmia\tr3!, {r1, r2, r4, r5}\n \tmovs\tr3, r0\n-\tldrh\tr0, [r4, r2]\n+\tldrh\tr0, [r5, r2]\n \tmovs\tr5, r0\n-\tldr\tr2, [r7, #92]\t@ 0x5c\n+\tldr\tr2, [r0, #96]\t@ 0x60\n \tmovs\tr4, r0\n-\tlsrs\tr0, r2, #27\n+\tlsrs\tr0, r3, #27\n \tmovs\tr0, r1\n-\tlsrs\tr0, r4, #23\n+\tlsrs\tr0, r5, #23\n \tmovs\tr0, r1\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream():\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n std::basic_ios >::basic_ios():\n /usr/include/c++/10/bits/basic_ios.h:462\n \tadd.w\tr7, r0, #64\t@ 0x40\n@@ -1937881,23 +1937881,23 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstcl\t0, cr0, [r4, #-20]\t@ 0xffffffec\n-\tlsrs\tr0, r0, #16\n+\tstcl\t0, cr0, [ip, #-20]\t@ 0xffffffec\n+\tlsrs\tr0, r1, #16\n \tmovs\tr0, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldcl\t0, cr0, [sl], {5}\n-\tlsrs\tr2, r2, #12\n+\tstcl\t0, cr0, [r2], #20\n+\tlsrs\tr2, r3, #12\n \tmovs\tr0, r1\n CAF::getNextToken():\n ./src/caf/caf.C:501\n \tldr\tr2, [pc, #196]\t@ (3b7be4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x219db0>)\n \tldr\tr3, [pc, #200]\t@ (3b7be8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x219db4>)\n \tadd\tr2, pc\n ./src/caf/caf.C:506\n@@ -1938027,17 +1938027,17 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrb\tr2, [r6, r0]\n \tmovs\tr7, r1\n \tstrb\tr2, [r3, r0]\n \tmovs\tr7, r1\n-\tlsrs\tr2, r5, #8\n+\tlsrs\tr2, r6, #8\n \tmovs\tr0, r1\n-\tlsrs\tr4, r3, #8\n+\tlsrs\tr4, r4, #8\n \tmovs\tr0, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n CAF::getCafPrimer():\n ./src/caf/caf.C:778\n@@ -1941340,27 +1941340,27 @@\n \tmovs\tr0, r0\n \tmov\tr6, r5\n \tmovs\tr7, r1\n \tcmp\tlr, ip\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstc2l\t0, cr0, [ip], #-28\t@ 0xffffffe4\n-\tuxth\tr2, r3\n+\tldc2l\t0, cr0, [r4], #-28\t@ 0xffffffe4\n+\tuxth\tr2, r4\n \tmovs\tr6, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfbb40007\n-\t\t\t@ instruction: 0xfb9e0007\n+\t\t\t@ instruction: 0xfbbc0007\n+\tumull\tr0, r0, r6, r7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tusada8\tr0, sl, r7, r0\n-\tsmlawb\tr0, ip, r7, r0\n+\tsmull\tr0, r0, r2, r7\n+\tsmlsd\tr0, r4, r7, r0\n CAF::getCafClipping():\n ./src/caf/caf.C:956\n \tldr\tr2, [pc, #336]\t@ (3b8c7c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21ae48>)\n \tldr\tr3, [pc, #340]\t@ (3b8c80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21ae4c>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n@@ -1941586,16 +1941586,16 @@\n \tmovs\tr0, r0\n \tadd\tr0, r1\n \tmovs\tr7, r1\n \tmvns\tr6, r1\n \tmovs\tr7, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xfa540007\n-\t\t\t@ instruction: 0xfa8a0007\n+\t\t\t@ instruction: 0xfa5c0007\n+\t\t\t@ instruction: 0xfa920007\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n CAF::getCafSeqVector():\n ./src/caf/caf.C:815\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n std::__detail::_List_node_header::_M_init():\n /usr/include/c++/10/bits/stl_list.h:153\n@@ -1942338,16 +1942338,16 @@\n \tmovs\tr0, r0\n \tsubs\tr7, #176\t@ 0xb0\n \tmovs\tr7, r1\n \tsubs\tr7, #142\t@ 0x8e\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs.w\tr0, sl, #8847360\t@ 0x870000\n-\t\t\t@ instruction: 0xf6e40007\n+\trsb\tr0, r2, #8847360\t@ 0x870000\n+\t\t\t@ instruction: 0xf6ec0007\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n CAF::getCafDye():\n ./src/caf/caf.C:761\n \tldr\tr2, [pc, #224]\t@ (3b9188 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21b354>)\n@@ -1942503,16 +1942503,16 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr6, #160\t@ 0xa0\n \tmovs\tr7, r1\n \tsubs\tr6, #126\t@ 0x7e\n \tmovs\tr7, r1\n-\teor.w\tr0, r6, #8847360\t@ 0x870000\n-\torns\tr0, r8, #8847360\t@ 0x870000\n+\teor.w\tr0, lr, #8847360\t@ 0x870000\n+\teor.w\tr0, r0, #8847360\t@ 0x870000\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n CAF::getCafInsertSize():\n ./src/caf/caf.C:786\n \tldr\tr2, [pc, #220]\t@ (3b9288 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21b454>)\n@@ -1942658,16 +1942658,16 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr5, #156\t@ 0x9c\n \tmovs\tr7, r1\n \tsubs\tr5, #140\t@ 0x8c\n \tmovs\tr7, r1\n-\tusat\tr0, #7, r8\n-\t\t\t@ instruction: 0xf37a0007\n+\t\t\t@ instruction: 0xf3900007\n+\tusat\tr0, #7, r2\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n CAF::getText[abi:cxx11]():\n ./src/caf/caf.C:520\n \tpush\t{r4, r5, r6, r7, lr}\n@@ -1942954,16 +1942954,16 @@\n \tmovs\tr0, r0\n \tsubs\tr4, #160\t@ 0xa0\n \tmovs\tr7, r1\n \tsubs\tr4, #152\t@ 0x98\n \tmovs\tr7, r1\n \tsubs\tr4, #88\t@ 0x58\n \tmovs\tr7, r1\n-\t\t\t@ instruction: 0xf21e0007\n-\t\t\t@ instruction: 0xf2100007\n+\t\t\t@ instruction: 0xf2260007\n+\t\t\t@ instruction: 0xf2180007\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n CAF::getIdentifier():\n ./src/caf/caf.C:544\n \tldr\tr2, [pc, #424]\t@ (3b95c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21b794>)\n@@ -1943251,26 +1943251,26 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr3, #38\t@ 0x26\n \tmovs\tr7, r1\n \tsubs\tr2, #250\t@ 0xfa\n \tmovs\tr7, r1\n-\tadd.w\tr0, r6, #7\n-\t\t\t@ instruction: 0xf0f80007\n+\tadd.w\tr0, lr, #7\n+\tadd.w\tr0, r0, #7\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tmovw\tr0, #24583\t@ 0x6007\n-\t\t\t@ instruction: 0xf2320007\n-\t\t\t@ instruction: 0xf2240007\n-\taddw\tr0, sl, #7\n+\tmovw\tr0, #57351\t@ 0xe007\n+\t\t\t@ instruction: 0xf23a0007\n+\t\t\t@ instruction: 0xf22c0007\n+\t\t\t@ instruction: 0xf2120007\n CAF::getCafCloneVector():\n ./src/caf/caf.C:929\n \tldr\tr2, [pc, #404]\t@ (3b9794 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21b960>)\n \tldr\tr3, [pc, #408]\t@ (3b9798 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21b964>)\n \tpush\t{r4, r5, r6, lr}\n \tadd\tr2, pc\n \tmov\tr4, r0\n@@ -1943532,22 +1943532,22 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr1, #72\t@ 0x48\n \tmovs\tr7, r1\n \tsubs\tr0, #244\t@ 0xf4\n \tmovs\tr7, r1\n-\tcdp\t0, 13, cr0, cr8, cr7, {0}\n-\tcdp\t0, 12, cr0, cr10, cr7, {0}\n+\tcdp\t0, 14, cr0, cr0, cr7, {0}\n+\tcdp\t0, 13, cr0, cr2, cr7, {0}\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tcdp\t0, 7, cr0, cr10, cr7, {0}\n-\tcdp\t0, 6, cr0, cr12, cr7, {0}\n+\tcdp\t0, 8, cr0, cr2, cr7, {0}\n+\tcdp\t0, 7, cr0, cr4, cr7, {0}\n CAF::countReadsBeforeLoad(std::__cxx11::basic_string, std::allocator > const&):\n ./src/caf/caf.C:272\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr.w\tr1, [pc, #1484]\t@ 3b9d90 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21bf5c>\n \tvpush\t{d8-d11}\n \tsub.w\tsp, sp, #628\t@ 0x274\n@@ -1944509,33 +1944509,33 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tadd\tr2, pc, #952\t@ (adr r2, 3ba164 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c330>)\n+\tadd\tr2, pc, #984\t@ (adr r2, 3ba184 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c350>)\n \tmovs\tr6, r0\n-\tcdp\t0, 11, cr0, cr4, cr7, {0}\n-\tldr\tr6, [r2, #60]\t@ 0x3c\n+\tcdp\t0, 11, cr0, cr12, cr7, {0}\n+\tldr\tr6, [r3, #60]\t@ 0x3c\n \tmovs\tr4, r0\n-\tsubs\tr0, r0, #3\n+\tsubs\tr0, r1, #3\n \tmovs\tr5, r0\n-\tldc\t0, cr0, [r8, #28]!\n+\tstcl\t0, cr0, [r0, #28]\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r2, r2]\n+\tstrb\tr0, [r4, r2]\n \tmovs\tr3, r0\n-\tldr\tr6, [r4, #20]\n+\tldr\tr6, [r5, #20]\n \tmovs\tr4, r0\n-\tadds\tr0, r2, #1\n+\tadds\tr0, r3, #1\n \tmovs\tr5, r0\n-\tstrh\tr6, [r2, r7]\n+\tstrh\tr2, [r4, r7]\n \tmovs\tr3, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tadds\tr2, #244\t@ 0xf4\n \tmovs\tr7, r1\n@@ -1944994,35 +1944994,35 @@\n \tvmov\tr0, s19\n \tblx\tbb54 >::~basic_filebuf()@plt>\n \tb.n\t3ba06a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c236>\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n-\tstr\tr6, [r5, r5]\n+\tstr\tr2, [r7, r5]\n \tmovs\tr3, r0\n-\tstr\tr4, [r1, r5]\n+\tstr\tr0, [r3, r5]\n \tmovs\tr3, r0\n-\tbfi\tr0, sl, #0, #4\n-\t\t\t@ instruction: 0xf3500003\n-\tsbfx\tr0, r4, #0, #4\n-\t\t\t@ instruction: 0xf35a0003\n-\tstmia.w\tsl!, {r0, r1, r2}\n-\t\t\t@ instruction: 0xe8500007\n+\t\t\t@ instruction: 0xf3720003\n+\t\t\t@ instruction: 0xf3580003\n+\tsbfx\tr0, ip, #0, #4\n+\tbfi\tr0, r2, #0, #4\n+\tldmia.w\tr2!, {r0, r1, r2}\n+\t\t\t@ instruction: 0xe8580007\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tbkpt\t0x008c\n \tmovs\tr2, r0\n \tbkpt\t0x0084\n \tmovs\tr2, r0\n-\tb.n\t3ba08c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c258>\n+\tb.n\t3ba09c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c268>\n \tmovs\tr7, r0\n-\tb.n\t3ba06c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c238>\n+\tb.n\t3ba07c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c248>\n \tmovs\tr7, r0\n CAF::CAF(ReadPool*, std::__cxx11::list >*, std::vector >*):\n ./src/caf/caf.C:126\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1124]\t@ 3ba534 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21c700>\n \tsub\tsp, #52\t@ 0x34\n@@ -1946441,29 +1946441,29 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tcmp\tr1, #244\t@ 0xf4\n \tmovs\tr7, r1\n \tcmp\tr0, #96\t@ 0x60\n \tmovs\tr7, r1\n-\tb.n\t3ba98c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cb58>\n+\tb.n\t3ba99c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cb68>\n \tmovs\tr7, r0\n-\tldmia\tr1, {r1, r2, r3, r5, r6}\n+\tldmia\tr1, {r1, r2, r4, r5, r6}\n \tmovs\tr5, r0\n-\tb.n\t3ba934 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cb00>\n+\tb.n\t3ba944 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cb10>\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t3ba8b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21ca80>\n+\tb.n\t3ba8c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21ca90>\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r3, r4, r5, r7}\n+\tldmia\tr0!, {r6, r7}\n \tmovs\tr5, r0\n-\tsvc\t222\t@ 0xde\n+\tsvc\t230\t@ 0xe6\n \tmovs\tr7, r0\n CAF::getCafAlignSCF():\n ./src/caf/caf.C:1056\n \tldr.w\tr2, [pc, #1124]\t@ 3bad08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21ced4>\n \tldr.w\tr3, [pc, #1124]\t@ 3bad0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21ced8>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -1947121,25 +1947121,25 @@\n \tmovs\tr0, r0\n \tmovs\tr6, #168\t@ 0xa8\n \tmovs\tr7, r1\n \tmovs\tr4, #236\t@ 0xec\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbgt.n\t3bad60 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf2c>\n+\tbgt.n\t3bad70 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf3c>\n \tmovs\tr7, r0\n-\tstr\tr0, [sp, #288]\t@ 0x120\n+\tstr\tr0, [sp, #320]\t@ 0x140\n \tmovs\tr6, r0\n-\tbgt.n\t3bad58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf24>\n+\tbgt.n\t3bad68 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf34>\n \tmovs\tr7, r0\n-\tblt.n\t3bad08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21ced4>\n+\tblt.n\t3bad18 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cee4>\n \tmovs\tr7, r0\n-\tbgt.n\t3bada0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf6c>\n+\tbgt.n\t3badb0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf7c>\n \tmovs\tr7, r0\n-\tbgt.n\t3bad74 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf40>\n+\tbgt.n\t3bad84 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21cf50>\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n CAF::getCafAssembledFrom():\n ./src/caf/caf.C:1221\n@@ -1947657,35 +1947657,35 @@\n \tmovs\tr0, r0\n \tmovs\tr2, #16\n \tmovs\tr7, r1\n \tmovs\tr0, #228\t@ 0xe4\n \tmovs\tr7, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tbge.n\t3bb0ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d278>\n+\tbge.n\t3bb0bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d288>\n \tmovs\tr7, r0\n-\tbge.n\t3bb0a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d270>\n+\tbge.n\t3bb0b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d280>\n \tmovs\tr7, r0\n-\tbge.n\t3bb0a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d270>\n+\tbge.n\t3bb0b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d280>\n \tmovs\tr7, r0\n-\tbge.n\t3bb094 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d260>\n+\tbge.n\t3bb0a4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d270>\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tbge.n\t3bb07c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d248>\n+\tbge.n\t3bb08c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d258>\n \tmovs\tr7, r0\n-\tbls.n\t3bafd4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d1a0>\n+\tbls.n\t3bafe4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d1b0>\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbls.n\t3bafd0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d19c>\n+\tbls.n\t3bafe0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d1ac>\n \tmovs\tr7, r0\n-\tbls.n\t3bb138 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d304>\n+\tbls.n\t3bb148 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d314>\n \tmovs\tr7, r0\n CAF::addUnprocessed():\n ./src/caf/caf.C:648\n \tldr\tr1, [pc, #288]\t@ (3bb1ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d378>)\n \tldr\tr3, [pc, #292]\t@ (3bb1b0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21d37c>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n \tadd\tr1, pc\n@@ -1949477,21 +1949477,21 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #24\n \tmovs\tr0, r0\n \tsubs\tr0, r0, r2\n \tmovs\tr7, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tbmi.n\t3bb96c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21db38>\n+\tbmi.n\t3bb97c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21db48>\n \tmovs\tr7, r0\n-\tbmi.n\t3bbae4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21dcb0>\n+\tbmi.n\t3bbaf4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21dcc0>\n \tmovs\tr7, r0\n-\tbcs.n\t3bb9f4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21dbc0>\n+\tbcs.n\t3bba04 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21dbd0>\n \tmovs\tr7, r0\n-\tmovs\tr6, #164\t@ 0xa4\n+\tmovs\tr6, #172\t@ 0xac\n \tmovs\tr4, r0\n \tlsrs\tr4, r4, #4\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tadd\tr5, pc, #664\t@ (adr r5, 3bbcf8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21dec4>)\n \tmovs\tr2, r0\n@@ -1951475,77 +1951475,77 @@\n \tmovs\tr0, r0\n \tasrs\tr4, r2, #19\n \tmovs\tr7, r1\n \tlsrs\tr4, r5, #31\n \tmovs\tr0, r0\n \tasrs\tr2, r5, #2\n \tmovs\tr7, r1\n-\tldr\tr0, [sp, #536]\t@ 0x218\n+\tldr\tr0, [sp, #568]\t@ 0x238\n \tmovs\tr4, r0\n \tlsrs\tr4, r5, #22\n \tmovs\tr0, r0\n \tlsrs\tr4, r5, #16\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldmia\tr2, {r2, r3, r4, r5, r7}\n+\tldmia\tr2, {r2, r6, r7}\n \tmovs\tr7, r0\n-\tldmia\tr2!, {r3}\n+\tldmia\tr2!, {r4}\n \tmovs\tr7, r0\n-\tldmia\tr2!, {r3, r4, r6}\n+\tldmia\tr2!, {r5, r6}\n \tmovs\tr7, r0\n-\tldmia\tr2!, {r1, r5}\n+\tldmia\tr2!, {r1, r3, r5}\n \tmovs\tr7, r0\n-\tldmia\tr2, {r2, r4}\n+\tldmia\tr2, {r2, r3, r4}\n \tmovs\tr7, r0\n-\tldmia\tr1!, {r2, r5, r6, r7}\n+\tldmia\tr1!, {r2, r3, r5, r6, r7}\n \tmovs\tr7, r0\n-\tldmia\tr1!, {r3, r4, r6, r7}\n+\tldmia\tr1!, {r5, r6, r7}\n \tmovs\tr7, r0\n-\tbhi.n\t3bc774 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21e940>\n+\tbhi.n\t3bc784 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21e950>\n \tmovs\tr3, r0\n-\tb.n\t3bc6ac , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21e878>\n+\tb.n\t3bc6bc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21e888>\n \tmovs\tr5, r0\n-\tldmia\tr1!, {r2, r4, r7}\n+\tldmia\tr1!, {r2, r3, r4, r7}\n \tmovs\tr7, r0\n \tasrs\tr0, r7, #1\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r2, r3, r6}\n+\tldmia\tr0!, {r2, r4, r6}\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r1, r5, r6}\n+\tldmia\tr0!, {r1, r3, r5, r6}\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r1, r3, r5, r7}\n+\tldmia\tr0!, {r1, r4, r5, r7}\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r1, r5}\n+\tldmia\tr0!, {r1, r3, r5}\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r1, r3, r4, r5, r7}\n+\tldmia\tr0!, {r1, r6, r7}\n \tmovs\tr7, r0\n-\tstmia\tr7!, {r2, r5, r6, r7}\n+\tstmia\tr7!, {r2, r3, r5, r6, r7}\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r1, r2, r6, r7}\n+\tldmia\tr0!, {r1, r2, r3, r6, r7}\n \tmovs\tr7, r0\n-\tstmia\tr7!, {r1, r5, r7}\n+\tstmia\tr7!, {r1, r3, r5, r7}\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r1, r4, r6, r7}\n+\tldmia\tr0!, {r1, r3, r4, r6, r7}\n \tmovs\tr7, r0\n-\tstmia\tr7!, {r5, r6}\n+\tstmia\tr7!, {r3, r5, r6}\n \tmovs\tr7, r0\n-\tldmia\tr0!, {r2, r5, r6, r7}\n+\tldmia\tr0!, {r2, r3, r5, r6, r7}\n \tmovs\tr7, r0\n-\tstmia\tr7!, {r1, r2, r3, r5}\n+\tstmia\tr7!, {r1, r2, r4, r5}\n \tmovs\tr7, r0\n-\tstmia\tr7!, {r1, r2, r3, r5}\n+\tstmia\tr7!, {r1, r2, r4, r5}\n \tmovs\tr7, r0\n \tlsrs\tr0, r7, #2\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r3, r4, r5, r6}\n+\tstmia\tr5!, {r7}\n \tmovs\tr7, r0\n-\tstmia\tr7!, {r1, r2, r6}\n+\tstmia\tr7!, {r1, r2, r3, r6}\n \tmovs\tr7, r0\n \tlsrs\tr2, r6, #6\n \tmovs\tr7, r1\n std::operator-(std::_Deque_iterator const&, std::_Deque_iterator const&):\n /usr/include/c++/10/bits/stl_deque.h:356\n \tldr\tr0, [r5, #36]\t@ 0x24\n \tldr\tr2, [r5, #20]\n@@ -1953267,55 +1953267,55 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldr\tr7, [sp, #72]\t@ 0x48\n+\tldr\tr7, [sp, #120]\t@ 0x78\n \tmovs\tr2, r0\n-\tldr\tr7, [sp, #56]\t@ 0x38\n+\tldr\tr7, [sp, #104]\t@ 0x68\n \tmovs\tr2, r0\n \tlsrs\tr4, r4, #31\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstmia\tr6!, {r3, r4, r5, r6, r7}\n+\tstmia\tr7!, {r2}\n \tmovs\tr2, r0\n-\tstmia\tr6!, {r1, r4, r5, r6, r7}\n+\tstmia\tr6!, {r1, r2, r3, r4, r5, r6, r7}\n \tmovs\tr2, r0\n-\tble.n\t3bd408 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f5d4>\n+\tble.n\t3bd418 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f5e4>\n \tmovs\tr4, r0\n \tlsls\tr4, r2, #23\n \tmovs\tr0, r0\n-\tldmia\tr0!, {r1, r2, r4, r6}\n+\tldmia\tr0!, {r1, r2, r3, r4, r6}\n \tmovs\tr3, r0\n-\tstrh\tr4, [r3, #8]\n+\tstrh\tr4, [r4, #8]\n \tmovs\tr4, r0\n \tlsrs\tr0, r5, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsrs\tr4, r3, #10\n+\tlsrs\tr0, r5, #10\n \tmovs\tr3, r0\n-\t\t\t@ instruction: 0xb8e6\n+\t\t\t@ instruction: 0xb8ee\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb8e6\n+\t\t\t@ instruction: 0xb8ee\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb8d6\n+\t\t\t@ instruction: 0xb8de\n \tmovs\tr7, r0\n \tlsrs\tr4, r2, #17\n \tmovs\tr0, r0\n-\tcbnz\tr0, 3bd41e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f5ea>\n+\tcbnz\tr0, 3bd420 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f5ec>\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb85a\n+\t\t\t@ instruction: 0xb862\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb7b2\n+\t\t\t@ instruction: 0xb7ba\n \tmovs\tr7, r0\n CAF::createCafObject():\n ./src/caf/caf.C:1669\n \tldr\tr2, [pc, #228]\t@ (3bd4c4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f690>)\n \tldr\tr3, [pc, #232]\t@ (3bd4c8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f694>)\n \tadd\tr2, pc\n \tpush\t{r4, r5, lr}\n@@ -1953444,24 +1953444,24 @@\n \tsmull\tr0, r0, r0, lr\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tusada8\tr0, r2, lr, r0\n \tsmmla\tr0, r2, lr, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb8fc\n+\tcbnz\tr4, 3bd4dc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f6a8>\n \tmovs\tr7, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb8b2\n+\t\t\t@ instruction: 0xb8ba\n \tmovs\tr7, r0\n \tmla\tr0, r0, lr, r0\n-\t\t\t@ instruction: 0xb890\n+\t\t\t@ instruction: 0xb898\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb8b2\n+\t\t\t@ instruction: 0xb8ba\n \tmovs\tr7, r0\n CAF::getReadname(std::__cxx11::basic_string, std::allocator >):\n ./src/caf/caf.C:593\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr5, r2\n \tldr\tr2, [pc, #392]\t@ (3bd680 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x21f84c>)\n \tsub\tsp, #48\t@ 0x30\n@@ -1953785,17 +1953785,17 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \t\t\t@ instruction: 0xfa62000e\n \t\t\t@ instruction: 0xfa54000e\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb81a\n+\t\t\t@ instruction: 0xb822\n \tmovs\tr7, r0\n-\tadd\tr2, sp, #656\t@ 0x290\n+\tadd\tr2, sp, #688\t@ 0x2b0\n \tmovs\tr4, r0\n \tvld4.8\t{d16-d19}, [ip], lr\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n CAF::getCafReadname():\n ./src/caf/caf.C:674\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n@@ -1955373,23 +1955373,23 @@\n \tb.n\t3bde40 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22000c>\n \tb.n\t3bde6a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220036>\n \tusat16\tr0, #14, ip\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tusat\tr0, #14, lr\n \taddw\tr0, r8, #14\n-\tadd\tr7, pc, #720\t@ (adr r7, 3be158 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220324>)\n+\tadd\tr7, pc, #752\t@ (adr r7, 3be178 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220344>)\n \tmovs\tr7, r0\n-\tadd\tr7, pc, #664\t@ (adr r7, 3be124 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2202f0>)\n+\tadd\tr7, pc, #696\t@ (adr r7, 3be144 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220310>)\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr6, r1, #24\n+\tlsls\tr2, r3, #24\n \tmovs\tr3, r0\n \tldrb\tr6, [r0, #31]\n \tmovs\tr2, r0\n CAF::loadNextSeqs(unsigned long long, unsigned long long, unsigned long long):\n ./src/caf/caf.C:424\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r2\n@@ -1956173,27 +1956173,27 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \t\t\t@ instruction: 0xf0b4000e\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \teors.w\tr0, ip, #14\n-\tldrb\tr4, [r3, r5]\n+\tldrb\tr4, [r4, r5]\n \tmovs\tr6, r0\n-\tadd\tr5, pc, #408\t@ (adr r5, 3be53c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220708>)\n+\tadd\tr5, pc, #440\t@ (adr r5, 3be55c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220728>)\n \tmovs\tr7, r0\n-\tmovs\tr6, #2\n+\tmovs\tr6, #10\n \tmovs\tr4, r0\n-\tbhi.n\t3be38c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220558>\n+\tbhi.n\t3be39c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220568>\n \tmovs\tr4, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr2, r2, #26\n+\tlsrs\tr6, r3, #26\n \tmovs\tr3, r0\n-\tlsrs\tr2, r5, #24\n+\tlsrs\tr6, r6, #24\n \tmovs\tr3, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tstc\t0, cr0, [r0, #56]!\t@ 0x38\n CAF::getCafDye():\n ./src/caf/caf.C:763\n \tmov\tr0, r4\n@@ -1957025,21 +1957025,21 @@\n \tnop.w\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \teors\tr1, r3\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr2, r6, #3\n+\tsubs\tr2, r7, #3\n \tmovs\tr4, r0\n-\tlsrs\tr0, r5, #5\n+\tlsrs\tr4, r6, #5\n \tmovs\tr3, r0\n-\tbne.n\t3be7f8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2209c4>\n+\tbne.n\t3be808 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2209d4>\n \tmovs\tr4, r0\n-\tlsrs\tr2, r1, #4\n+\tlsrs\tr6, r2, #4\n \tmovs\tr3, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n CAF::loadNextSeqs(unsigned long long, unsigned long long, unsigned long long):\n ./src/caf/caf.C:427 (discriminator 1)\n \tadd\tr4, sp, #64\t@ 0x40\n \tmov\tr0, r4\n@@ -1957290,29 +1957290,29 @@\n CAF::loadNextSeqs(unsigned long long, unsigned long long, unsigned long long):\n ./src/caf/caf.C:427 (discriminator 10)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t3be994 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220b60>\n \tb.n\t3be9b8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220b84>\n \tnop\n-\tadd\tr5, pc, #184\t@ (adr r5, 3bea80 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220c4c>)\n+\tadd\tr5, pc, #216\t@ (adr r5, 3beaa0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220c6c>)\n \tmovs\tr7, r0\n-\tadd\tr5, pc, #112\t@ (adr r5, 3bea3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220c08>)\n+\tadd\tr5, pc, #144\t@ (adr r5, 3bea5c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220c28>)\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadd\tr5, pc, #272\t@ (adr r5, 3beaec , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220cb8>)\n+\tadd\tr5, pc, #304\t@ (adr r5, 3beb0c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220cd8>)\n \tmovs\tr7, r0\n-\tadd\tr5, pc, #168\t@ (adr r5, 3bea88 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220c54>)\n+\tadd\tr5, pc, #200\t@ (adr r5, 3beaa8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220c74>)\n \tmovs\tr7, r0\n-\tadd\tr5, pc, #280\t@ (adr r5, 3beafc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220cc8>)\n+\tadd\tr5, pc, #312\t@ (adr r5, 3beb1c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220ce8>)\n \tmovs\tr7, r0\n CAF::load(std::__cxx11::basic_string, std::allocator > const&, unsigned char, unsigned char, std::vector >&, bool, void (*)(std::__cxx11::list >&, ReadPool&), void (*)(ReadPool&), bool):\n ./src/caf/caf.C:383\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/caf/caf.C:386\n \tcmp\tr3, #1\n ./src/caf/caf.C:383\n@@ -1957793,37 +1957793,37 @@\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t3be7b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220980>\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr4, pc, #208\t@ (adr r4, 3bedbc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220f88>)\n+\tadd\tr4, pc, #240\t@ (adr r4, 3beddc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220fa8>)\n \tmovs\tr7, r0\n-\tcbz\tr6, 3bed38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220f04>\n+\tcbz\tr2, 3bed3c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220f08>\n \tmovs\tr2, r0\n \tb.n\t3be610 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2207dc>\n \tmovs\tr6, r1\n-\tldrh\tr0, [r4, #60]\t@ 0x3c\n+\tldrh\tr0, [r5, #60]\t@ 0x3c\n \tmovs\tr5, r0\n \tb.n\t3be5b4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220780>\n \tmovs\tr6, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tldrh\tr4, [r1, #50]\t@ 0x32\n+\tldrh\tr4, [r2, #50]\t@ 0x32\n \tmovs\tr5, r0\n-\tadd\tr2, pc, #32\t@ (adr r2, 3bed38 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220f04>)\n+\tadd\tr2, pc, #64\t@ (adr r2, 3bed58 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x220f24>)\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n CAFFlexLexer::yywrap():\n ./src/caf/caf_flexer.cc:343\n@@ -1958558,17 +1958558,17 @@\n \tmov\tr0, r5\n \tldr\tr1, [pc, #12]\t@ (3bf15c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221328>)\n \tldr\tr2, [r3, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n \tb.n\t3bf06e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22123a>\n \tnop\n-\tldr\tr6, [r7, r7]\n+\tldrh\tr6, [r0, r0]\n \tmovs\tr6, r0\n-\tldr\tr4, [r5, r7]\n+\tldr\tr4, [r6, r7]\n \tmovs\tr6, r0\n CAFFlexLexer::yy_switch_to_buffer(yy_buffer_state*):\n ./src/caf/caf_flexer.cc:2711\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n CAFFlexLexer::yyensure_buffer_stack():\n ./src/caf/caf_flexer.cc:2922\n@@ -1958722,17 +1958722,17 @@\n \tldr\tr1, [pc, #16]\t@ (3bf254 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221420>)\n \tldr\tr3, [r6, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr3\n ./src/caf/caf_flexer.cc:2935\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3bf218 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2213e4>\n-\tldr\tr4, [r6, r4]\n+\tldr\tr4, [r7, r4]\n \tmovs\tr6, r0\n-\tldr\tr2, [r4, r4]\n+\tldr\tr2, [r5, r4]\n \tmovs\tr6, r0\n CAFFlexLexer::yy_create_buffer(std::istream*, int):\n ./src/caf/caf_flexer.cc:2786\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n ./src/caf/caf_flexer.cc:2787\n \tldr.w\tr8, [r0]\n \tldr\tr3, [pc, #268]\t@ (3bf370 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22153c>)\n@@ -1958935,17 +1958935,17 @@\n ./src/caf/caf_flexer.cc:2851\n \tldr\tr7, [r4, #4]\n CAFFlexLexer::yy_create_buffer(std::istream&, int):\n ./src/caf/caf_flexer.cc:2851\n \tb.n\t3bf28e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22145a>\n \tnop\n \tstc2l\t15, cr15, [pc, #1020]!\t@ 3bf770 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22193c>\n-\tldrsb\tr4, [r4, r7]\n+\tldrsb\tr4, [r5, r7]\n \tmovs\tr6, r0\n-\tldrsb\tr0, [r3, r7]\n+\tldrsb\tr0, [r4, r7]\n \tmovs\tr6, r0\n CAFFlexLexer::CAFFlexLexer(std::istream*, std::ostream*):\n ./src/caf/caf_flexer.cc:2244\n \tldr\tr3, [pc, #296]\t@ (3bf4a8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221674>)\n ./src/caf/caf_flexer.cc:2242\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n@@ -1959855,22 +1959855,22 @@\n \tstr.w\tr7, [r4, #320]\t@ 0x140\n ./src/caf/caf_flexer.cc:2459\n \tldr.w\tr3, [r5, r1, lsl #2]\n \tadd.w\tr6, r5, r1, lsl #2\n \tstr\tr7, [r3, #16]\n \tb.n\t3bf830 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2219fc>\n \tnop\n-\tstrb\tr0, [r1, r5]\n+\tstrb\tr0, [r2, r5]\n \tmovs\tr6, r0\n-\tstrb\tr6, [r5, r0]\n+\tstrb\tr6, [r6, r0]\n \tmovs\tr6, r0\n \tbl\t147a6e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xa38d6>\n-\tstrh\tr2, [r1, r0]\n+\tstrh\tr2, [r2, r0]\n \tmovs\tr6, r0\n-\tstr\tr2, [r5, r7]\n+\tstr\tr2, [r6, r7]\n \tmovs\tr6, r0\n CAFFlexLexer::yy_get_previous_state():\n ./src/caf/caf_flexer.cc:2504\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n ./src/caf/caf_flexer.cc:2509\n \tldr.w\tr4, [r0, #340]\t@ 0x154\n@@ -1960003,35 +1960003,35 @@\n \tmov\tr2, r4\n \tldrsh.w\tr1, [r1, #3632]\t@ 0xe30\n \tadd\tr1, r4\n \tldrsh.w\tip, [lr, r1, lsl #1]\n \tcmp\tip, r0\n \tbne.n\t3bfb1a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221ce6>\n \tb.n\t3bfb42 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221d0e>\n-\tpush\t{r3, r4, r5, r7, lr}\n+\tpush\t{r6, r7, lr}\n \tmovs\tr7, r0\n-\tstr\tr3, [sp, #776]\t@ 0x308\n+\tstr\tr3, [sp, #808]\t@ 0x328\n \tmovs\tr7, r0\n-\tpop\t{r1, r6, r7, pc}\n+\tpop\t{r1, r3, r6, r7, pc}\n \tmovs\tr7, r0\n-\tstr\tr3, [sp, #752]\t@ 0x2f0\n+\tstr\tr3, [sp, #784]\t@ 0x310\n \tmovs\tr7, r0\n-\tstr\tr3, [sp, #744]\t@ 0x2e8\n+\tstr\tr3, [sp, #776]\t@ 0x308\n \tmovs\tr7, r0\n-\tstr\tr3, [sp, #632]\t@ 0x278\n+\tstr\tr3, [sp, #664]\t@ 0x298\n \tmovs\tr7, r0\n-\tstr\tr3, [sp, #528]\t@ 0x210\n+\tstr\tr3, [sp, #560]\t@ 0x230\n \tmovs\tr7, r0\n-\tpop\t{r2, r7, pc}\n+\tpop\t{r2, r3, r7, pc}\n \tmovs\tr7, r0\n-\tadd\tr4, pc, #376\t@ (adr r4, 3bfd08 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221ed4>)\n+\tadd\tr4, pc, #408\t@ (adr r4, 3bfd28 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221ef4>)\n \tmovs\tr7, r0\n-\tpop\t{r3, r5, r6, pc}\n+\tpop\t{r4, r5, r6, pc}\n \tmovs\tr7, r0\n-\tldmia\tr6!, {r1, r2, r3, r7}\n+\tldmia\tr6!, {r1, r2, r4, r7}\n \tmovs\tr7, r0\n CAFFlexLexer::yy_try_NUL_trans(int):\n ./src/caf/caf_flexer.cc:2542\n \tldr\tr2, [pc, #172]\t@ (3bfc48 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221e14>)\n \tlsls\tr3, r1, #1\n ./src/caf/caf_flexer.cc:2537\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -1960121,33 +1960121,33 @@\n \tldrsh.w\tr2, [r2, #3632]\t@ 0xe30\n \tadd\tr2, r0\n \tldrsh.w\tr1, [r5, r2, lsl #1]\n \tcmp\tr1, r9\n \tbne.n\t3bfbee , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221dba>\n \tb.n\t3bfc1a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221de6>\n \tnop\n-\tstr\tr2, [sp, #880]\t@ 0x370\n+\tstr\tr2, [sp, #912]\t@ 0x390\n \tmovs\tr7, r0\n-\tstr\tr2, [sp, #792]\t@ 0x318\n+\tstr\tr2, [sp, #824]\t@ 0x338\n \tmovs\tr7, r0\n-\tpop\t{r1, r2, r6, r7}\n+\tpop\t{r1, r2, r3, r6, r7}\n \tmovs\tr7, r0\n-\tadd\tr3, pc, #624\t@ (adr r3, 3bfec8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x222094>)\n+\tadd\tr3, pc, #656\t@ (adr r3, 3bfee8 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2220b4>)\n \tmovs\tr7, r0\n-\tpush\t{r4, r7}\n+\tpush\t{r3, r4, r7}\n \tmovs\tr7, r0\n-\tstr\tr2, [sp, #624]\t@ 0x270\n+\tstr\tr2, [sp, #656]\t@ 0x290\n \tmovs\tr7, r0\n-\tpop\t{r2, r3, r4, r7}\n+\tpop\t{r2, r5, r7}\n \tmovs\tr7, r0\n-\tstr\tr2, [sp, #600]\t@ 0x258\n+\tstr\tr2, [sp, #632]\t@ 0x278\n \tmovs\tr7, r0\n-\tpop\t{r2, r4, r7}\n+\tpop\t{r2, r3, r4, r7}\n \tmovs\tr7, r0\n-\tldmia\tr5, {r1, r4, r5, r7}\n+\tldmia\tr5, {r1, r3, r4, r5, r7}\n \tmovs\tr7, r0\n CAFFlexLexer::yyunput(int, char*):\n ./src/caf/caf_flexer.cc:2561\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr8, r1\n ./src/caf/caf_flexer.cc:2564\n \tldr.w\tr7, [r0, #324]\t@ 0x144\n@@ -1960235,15 +1960235,15 @@\n ./src/caf/caf_flexer.cc:2597\n \tldrb.w\tr7, [r7, #-1]\n \tstrb.w\tr7, [r4, #316]\t@ 0x13c\n ./src/caf/caf_flexer.cc:2598\n \tstr.w\tr0, [r4, #324]\t@ 0x144\n ./src/caf/caf_flexer.cc:2599\n \tldmia.w\tsp!, {r3, r4, r5, r6, r7, r8, r9, pc}\n-\tldr\tr7, [pc, #408]\t@ (3bfeb4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x222080>)\n+\tldr\tr7, [pc, #440]\t@ (3bfed4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2220a0>)\n \tmovs\tr6, r0\n CAFFlexLexer::yyinput():\n ./src/caf/caf_flexer.cc:2603\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tldr\tr6, [pc, #220]\t@ (3bfe00 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x221fcc>)\n \tsub\tsp, #8\n@@ -1960754,17 +1960754,17 @@\n \tldr\tr1, [pc, #16]\t@ (3c0048 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x222214>)\n \tldr\tr2, [r6, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n ./src/caf/caf_flexer.cc:2935\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3c000e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2221da>\n-\tldr\tr3, [pc, #264]\t@ (3c0150 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22231c>)\n+\tldr\tr3, [pc, #296]\t@ (3c0170 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22233c>)\n \tmovs\tr6, r0\n-\tldr\tr3, [pc, #184]\t@ (3c0104 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2222d0>)\n+\tldr\tr3, [pc, #216]\t@ (3c0124 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2222f0>)\n \tmovs\tr6, r0\n CAFFlexLexer::yypop_buffer_state():\n ./src/caf/caf_flexer.cc:2901\n \tldr.w\tr3, [r0, #348]\t@ 0x15c\n \tcmp\tr3, #0\n \tbeq.n\t3c00cc , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x222298>\n ./src/caf/caf_flexer.cc:2901 (discriminator 1)\n@@ -1960927,17 +1960927,17 @@\n \tldr\tr1, [pc, #16]\t@ (3c0154 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x222320>)\n \tldr\tr3, [r5, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr3\n ./src/caf/caf_flexer.cc:2935\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3c011e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2222ea>\n-\tldr\tr2, [pc, #208]\t@ (3c0224 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2223f0>)\n+\tldr\tr2, [pc, #240]\t@ (3c0244 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x222410>)\n \tmovs\tr6, r0\n-\tldr\tr2, [pc, #136]\t@ (3c01e0 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2223ac>)\n+\tldr\tr2, [pc, #168]\t@ (3c0200 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2223cc>)\n \tmovs\tr6, r0\n CAFFlexLexer::yylex():\n ./src/caf/caf_flexer.cc:1647\n \tldr.w\tr3, [r0, #328]\t@ 0x148\n ./src/caf/caf_flexer.cc:1642\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r0\n@@ -1962436,35 +1962436,35 @@\n \tmovs\tr0, #34\t@ 0x22\n ./src/caf/caf_flexer.ll:114 (discriminator 3)\n \tstr.w\tr6, [fp, #332]\t@ 0x14c\n ./src/caf/caf_flexer.ll:115 (discriminator 3)\n \tb.w\t3c03e4 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2225b0>\n \tldmia\tr5, {r3, r4, r5, r6, r7}\n \tmovs\tr6, r1\n-\tadd\tr6, sp, #920\t@ 0x398\n+\tadd\tr6, sp, #952\t@ 0x3b8\n \tmovs\tr7, r0\n-\tldrh\tr4, [r6, #38]\t@ 0x26\n+\tldrh\tr4, [r7, #38]\t@ 0x26\n \tmovs\tr7, r0\n-\tldrh\tr4, [r7, #36]\t@ 0x24\n+\tldrh\tr4, [r0, #38]\t@ 0x26\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb6a8\n+\t\t\t@ instruction: 0xb6b0\n \tmovs\tr7, r0\n-\tldrh\tr2, [r4, #36]\t@ 0x24\n+\tldrh\tr2, [r5, #36]\t@ 0x24\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb678\n+\t\t\t@ instruction: 0xb680\n \tmovs\tr7, r0\n-\tldr\tr5, [sp, #336]\t@ 0x150\n+\tldr\tr5, [sp, #368]\t@ 0x170\n \tmovs\tr7, r0\n-\t\t\t@ instruction: 0xb65e\n+\tcpsie\tai\n \tmovs\tr7, r0\n-\tstmia\tr7!, {r3, r4, r5, r6}\n+\tstmia\tr7!, {r7}\n \tmovs\tr7, r0\n-\tldrh\tr6, [r3, #32]\n+\tldrh\tr6, [r4, #32]\n \tmovs\tr7, r0\n-\tadd\tr5, sp, #944\t@ 0x3b0\n+\tadd\tr5, sp, #976\t@ 0x3d0\n \tmovs\tr7, r0\n \t\t\t@ instruction: 0xea97ffff\n \tlsrs\tr4, r1, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tadds\tr0, #106\t@ 0x6a\n@@ -1963097,15 +1963097,15 @@\n \tmovs\tr1, r2\n \tmovs\tr5, #228\t@ 0xe4\n \tmovs\tr1, r2\n \tmovs\tr5, #162\t@ 0xa2\n \tmovs\tr1, r2\n \tmovs\tr5, #96\t@ 0x60\n \tmovs\tr1, r2\n-\tsubs\tr0, #250\t@ 0xfa\n+\tsubs\tr1, #2\n \tmovs\tr6, r0\n CAFFlexLexer::yyrestart(std::istream&):\n ./src/caf/caf_flexer.cc:2681\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n ./src/caf/caf_flexer.cc:2683\n \tldr.w\tr3, [r0, #348]\t@ 0x15c\n@@ -1963369,15 +1963369,15 @@\n \tldr\tr2, [r3, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n ./src/caf/caf_flexer.cc:2981\n \tldr\tr0, [r4, #28]\n \tb.n\t3c1558 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x223724>\n \tnop\n-\tadds\tr6, #226\t@ 0xe2\n+\tadds\tr6, #234\t@ 0xea\n \tmovs\tr6, r0\n CAFFlexLexer::yy_pop_state():\n ./src/caf/caf_flexer.cc:2988\n \tldr\tr3, [r0, #20]\n ./src/caf/caf_flexer.cc:2987\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -1963398,15 +1963398,15 @@\n \tldr.w\tr2, [r0, r1, lsl #2]\n \tlsls\tr3, r2, #1\n \tadds\tr3, #1\n \tstr.w\tr3, [r4, #332]\t@ 0x14c\n ./src/caf/caf_flexer.cc:2992\n \tpop\t{r4, pc}\n \tnop\n-\tadds\tr6, #240\t@ 0xf0\n+\tadds\tr6, #248\t@ 0xf8\n \tmovs\tr6, r0\n CAFFlexLexer::yy_top_state():\n ./src/caf/caf_flexer.cc:2996\n \tldr\tr3, [r0, #20]\n \tldr\tr2, [r0, #28]\n \tadd.w\tr0, r3, #1073741824\t@ 0x40000000\n \tsubs\tr1, r0, #1\n@@ -1963971,25 +1963971,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xb718\n \tmovs\tr6, r1\n-\tstmia\tr2!, {r7}\n+\tstmia\tr2!, {r3, r7}\n \tmovs\tr7, r0\n-\tstmia\tr2!, {r1, r3, r4, r5}\n+\tstmia\tr2!, {r1, r6}\n \tmovs\tr7, r0\n-\tstmia\tr2!, {r4, r5}\n+\tstmia\tr2!, {r3, r4, r5}\n \tmovs\tr7, r0\n-\tstmia\tr2!, {r1, r4}\n+\tstmia\tr2!, {r1, r3, r4}\n \tmovs\tr7, r0\n-\tstmia\tr2!, {r3}\n+\tstmia\tr2!, {r4}\n \tmovs\tr7, r0\n-\tstmia\tr1!, {r1, r2, r5, r6, r7}\n+\tstmia\tr1!, {r1, r2, r3, r5, r6, r7}\n \tmovs\tr7, r0\n MachineInfo::computeMemTotal():\n ./src/util/machineinfo.C:134\n \tpush\t{r4, r5, r6, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr5, #9\n ./src/util/machineinfo.C:134\n@@ -1964074,17 +1964074,17 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tpush\t{r1, r5, r6, lr}\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr1!, {r3, r4, r5}\n+\tstmia\tr1!, {r6}\n \tmovs\tr7, r0\n-\tsubs\tr2, r6, #6\n+\tsubs\tr2, r7, #6\n \tmovs\tr3, r0\n \tpush\t{r2, r3, r4, lr}\n \tmovs\tr6, r1\n MachineInfo::computeMemAvail():\n ./src/util/machineinfo.C:156\n \tpush\t{r4, r5, r6, r7, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n@@ -1964220,23 +1964220,23 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tb.n\t3c1b42 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x223d0e>\n \tnop\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr0!, {r1, r2, r4, r5, r7}\n+\tstmia\tr0!, {r1, r2, r3, r4, r5, r7}\n \tmovs\tr7, r0\n \tpush\t{r1, r2, r3, r4, r5, r7}\n \tmovs\tr6, r1\n-\tsubs\tr2, r3, #4\n+\tsubs\tr2, r4, #4\n \tmovs\tr3, r0\n-\tstmia\tr0!, {r1, r2, r3, r7}\n+\tstmia\tr0!, {r1, r2, r4, r7}\n \tmovs\tr7, r0\n-\tsubs\tr4, r6, #3\n+\tsubs\tr4, r7, #3\n \tmovs\tr3, r0\n \tpush\t{r3, r6}\n \tmovs\tr6, r1\n bool boost::regex_search<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > >, char, boost::regex_traits > >(__gnu_cxx::__normal_iterator, std::allocator > >, __gnu_cxx::__normal_iterator, std::allocator > >, boost::match_results<__gnu_cxx::__normal_iterator, std::allocator > >, std::allocator, std::allocator > > > > >&, boost::basic_regex > > const&, boost::regex_constants::_match_flags, __gnu_cxx::__normal_iterator, std::allocator > >) [clone .constprop.0]:\n /usr/include/boost/regex/v4/regex_search.hpp:46\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tldr\tr5, [pc, #528]\t@ (3c1d8c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x223f58>)\n@@ -1964553,25 +1964553,25 @@\n \tmovs\tr0, r0\n \tcbz\tr2, 3c1e0e , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x223fda>\n \tmovs\tr6, r1\n \tcbz\tr6, 3c1e0a , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x223fd6>\n \tmovs\tr6, r1\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\tsubs\tr4, r1, #7\n+\tsubs\tr4, r2, #7\n \tmovs\tr4, r0\n-\tlsrs\tr2, r3, #31\n+\tlsrs\tr2, r4, #31\n \tmovs\tr4, r0\n-\tasrs\tr4, r0, #32\n+\tasrs\tr4, r1, #32\n \tmovs\tr4, r0\n-\tlsrs\tr0, r3, #24\n+\tlsrs\tr0, r4, #24\n \tmovs\tr4, r0\n-\tlsls\tr6, r3, #26\n+\tlsls\tr6, r4, #26\n \tmovs\tr4, r0\n-\tlsls\tr0, r1, #27\n+\tlsls\tr0, r2, #27\n \tmovs\tr4, r0\n MachineInfo::computeNumCores():\n ./src/util/machineinfo.C:69\n \tldr.w\tr2, [pc, #1712]\t@ 3c246c , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x224638>\n \tldr.w\tr3, [pc, #1712]\t@ 3c2470 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x22463c>\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -1965467,15 +1965467,15 @@\n \tmovs\tr1, r2\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tpop\t{r4, r6, r7}\n+\tpop\t{r3, r4, r6, r7}\n \tmovs\tr7, r0\n \tasrs\tr4, r7, #30\n \tmovs\tr1, r2\n \tasrs\tr2, r7, #30\n \tmovs\tr1, r2\n \tasrs\tr0, r7, #30\n \tmovs\tr1, r2\n@@ -1965485,29 +1965485,29 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tadd\tr6, sp, #384\t@ 0x180\n \tmovs\tr6, r1\n \tlsls\tr0, r0, #21\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb8b2\n+\t\t\t@ instruction: 0xb8ba\n \tmovs\tr7, r0\n \tasrs\tr2, r3, #16\n \tmovs\tr1, r2\n \tlsls\tr4, r4, #22\n \tmovs\tr0, r0\n \tpop\t{r1, r3, r5, r6, r7}\n \tmovs\tr6, r1\n-\t\t\t@ instruction: 0xb836\n+\t\t\t@ instruction: 0xb83e\n \tmovs\tr7, r0\n \tasrs\tr6, r3, #15\n \tmovs\tr1, r2\n \tpop\t{r4, r5, r7}\n \tmovs\tr6, r1\n-\t\t\t@ instruction: 0xb81c\n+\t\t\t@ instruction: 0xb824\n \tmovs\tr7, r0\n \tasrs\tr0, r4, #14\n \tmovs\tr1, r2\n \tpop\t{r1, r2, r3, r5, r6}\n \tmovs\tr6, r1\n \tasrs\tr0, r3, #13\n \tmovs\tr1, r2\n@@ -1965614,17 +1965614,17 @@\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tadd\tr2, sp, #392\t@ 0x188\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xb638\n+\t\t\t@ instruction: 0xb640\n \tmovs\tr7, r0\n-\tasrs\tr2, r6, #18\n+\tasrs\tr2, r7, #18\n \tmovs\tr3, r0\n \tasrs\tr2, r3, #7\n \tmovs\tr1, r2\n \tadd\tr2, sp, #64\t@ 0x40\n \tmovs\tr6, r1\n \n 003c2598 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base>:\n@@ -1965912,15 +1965912,15 @@\n ./src/util/fileanddisk.C:92\n \tmovs\tr0, #100\t@ 0x64\n \tblx\tbe10 \n \tadd\tr0, sp, #408\t@ 0x198\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tpush\t{r1, r7}\n+\tpush\t{r1, r3, r7}\n \tmovs\tr7, r0\n myFSeek(_IO_FILE*, unsigned int, int):\n ./src/util/fileanddisk.C:117\n \tpush\t{r4, lr}\n ./src/util/fileanddisk.C:118\n \tmovs\tr3, #0\n ./src/util/fileanddisk.C:117\n@@ -1966508,21 +1966508,21 @@\n \tldr\tr0, [pc, #28]\t@ (3c2a68 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x4d0>)\n \tadd\tr0, pc\n \tblx\tb068 \n \tadd\tr7, pc, #352\t@ (adr r7, 3c2bb4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x61c>)\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrh\tr4, [r4, #24]\n+\tstrh\tr0, [r6, #24]\n \tmovs\tr2, r0\n \tadd\tr7, pc, #176\t@ (adr r7, 3c2b10 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x578>)\n \tmovs\tr6, r1\n-\tstr\tr4, [r7, #124]\t@ 0x7c\n+\tldr\tr4, [r0, #0]\n \tmovs\tr3, r0\n-\tldr\tr2, [r2, #0]\n+\tldr\tr2, [r3, #0]\n \tmovs\tr3, r0\n \tadds\tr3, #182\t@ 0xb6\n \tmovs\tr2, r0\n findLocationOfSelfBinary(std::__cxx11::basic_string, std::allocator >&):\n ./src/util/fileanddisk.C:251\n \tldr.w\tr2, [pc, #1300]\t@ 3c2f84 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x9ec>\n \tldr.w\tr3, [pc, #1300]\t@ 3c2f88 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x9f0>\n@@ -1967547,35 +1967547,35 @@\n \tmovs\tr1, r2\n \tlsrs\tr0, r7, #15\n \tmovs\tr1, r2\n \tlsrs\tr4, r2, #14\n \tmovs\tr1, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tsp, #128\t@ 0x80\n+\tadd\tsp, #160\t@ 0xa0\n \tmovs\tr7, r0\n \tlsrs\tr4, r1, #12\n \tmovs\tr1, r2\n \tadd\tr2, pc, #336\t@ (adr r2, 3c3108 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xb70>)\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #6\n \tmovs\tr1, r2\n-\tadd\tr6, sp, #384\t@ 0x180\n+\tadd\tr6, sp, #416\t@ 0x1a0\n \tmovs\tr7, r0\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tsxth\tr6, r0\n \tmovs\tr6, r1\n \tlsrs\tr2, r7, #4\n \tmovs\tr1, r2\n-\tadd\tr6, sp, #40\t@ 0x28\n+\tadd\tr6, sp, #72\t@ 0x48\n \tmovs\tr7, r0\n \tcbz\tr0, 3c2ffa , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xa62>\n \tmovs\tr6, r1\n-\tadd\tr5, sp, #592\t@ 0x250\n+\tadd\tr5, sp, #624\t@ 0x270\n \tmovs\tr7, r0\n \tcbz\tr6, 3c2ff4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xa5c>\n \tmovs\tr6, r1\n \tlsrs\tr2, r4, #2\n \tmovs\tr1, r2\n \tlsrs\tr0, r4, #1\n \tmovs\tr1, r2\n@@ -1968990,21 +1968990,21 @@\n \tnop\n \tldr\tr1, [sp, #704]\t@ 0x2c0\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr1, [sp, #632]\t@ 0x278\n \tmovs\tr6, r1\n-\tadd\tr6, pc, #736\t@ (adr r6, 3c39d8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1440>)\n+\tadd\tr6, pc, #768\t@ (adr r6, 3c39f8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1460>)\n \tmovs\tr7, r0\n \tasrs\tr0, r3, #2\n \tmovs\tr0, r0\n \tldr\tr0, [sp, #992]\t@ 0x3e0\n \tmovs\tr6, r1\n-\tstrb\tr0, [r2, r1]\n+\tstrb\tr4, [r3, r1]\n \tmovs\tr2, r0\n \tmovs\tr7, #68\t@ 0x44\n \tmovs\tr2, r0\n getFileSize(char const*):\n ./src/util/fileanddisk.C:717\n \tpush\t{r4, r5, r6, r7, lr}\n \tldr\tr2, [pc, #184]\t@ (3c37c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x122c>)\n@@ -1971562,63 +1971562,63 @@\n \tnop\n \tstr\tr6, [sp, #784]\t@ 0x310\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [sp, #688]\t@ 0x2b0\n \tmovs\tr6, r1\n-\tadd\tr3, pc, #96\t@ (adr r3, 3c4444 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1eac>)\n+\tadd\tr3, pc, #128\t@ (adr r3, 3c4464 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1ecc>)\n \tmovs\tr7, r0\n-\tadd\tr1, pc, #376\t@ (adr r1, 3c4560 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fc8>)\n+\tadd\tr1, pc, #408\t@ (adr r1, 3c4580 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fe8>)\n \tmovs\tr2, r1\n-\tadd\tr3, pc, #16\t@ (adr r3, 3c43fc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e64>)\n+\tadd\tr3, pc, #48\t@ (adr r3, 3c441c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e84>)\n \tmovs\tr7, r0\n-\tadd\tr3, pc, #8\t@ (adr r3, 3c43f8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e60>)\n+\tadd\tr3, pc, #40\t@ (adr r3, 3c4418 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e80>)\n \tmovs\tr7, r0\n-\tadd\tr0, pc, #968\t@ (adr r0, 3c47bc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2224>)\n+\tadd\tr0, pc, #1000\t@ (adr r0, 3c47dc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2244>)\n \tmovs\tr2, r1\n-\tadd\tr2, pc, #184\t@ (adr r2, 3c44b0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1f18>)\n+\tadd\tr2, pc, #216\t@ (adr r2, 3c44d0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1f38>)\n \tmovs\tr7, r0\n-\tadd\tr1, pc, #792\t@ (adr r1, 3c4714 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x217c>)\n+\tadd\tr1, pc, #824\t@ (adr r1, 3c4734 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x219c>)\n \tmovs\tr7, r0\n-\tadd\tr0, pc, #976\t@ (adr r0, 3c47d0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2238>)\n+\tadd\tr0, pc, #1008\t@ (adr r0, 3c47f0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2258>)\n \tmovs\tr7, r0\n-\tldr\tr6, [sp, #720]\t@ 0x2d0\n+\tldr\tr6, [sp, #752]\t@ 0x2f0\n \tmovs\tr2, r1\n-\tldr\tr7, [sp, #864]\t@ 0x360\n+\tldr\tr7, [sp, #896]\t@ 0x380\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr5, [sp, #880]\t@ 0x370\n+\tldr\tr5, [sp, #912]\t@ 0x390\n \tmovs\tr7, r0\n-\tldr\tr5, [sp, #792]\t@ 0x318\n+\tldr\tr5, [sp, #824]\t@ 0x338\n \tmovs\tr7, r0\n-\tldr\tr5, [sp, #736]\t@ 0x2e0\n+\tldr\tr5, [sp, #768]\t@ 0x300\n \tmovs\tr7, r0\n-\tldr\tr5, [sp, #648]\t@ 0x288\n+\tldr\tr5, [sp, #680]\t@ 0x2a8\n \tmovs\tr7, r0\n-\tstmia\tr4!, {r1, r3, r5, r6}\n+\tstmia\tr4!, {r1, r4, r5, r6}\n \tmovs\tr3, r0\n \tldrh\tr0, [r4, #52]\t@ 0x34\n \tmovs\tr6, r1\n-\tldr\tr1, [sp, #976]\t@ 0x3d0\n+\tldr\tr1, [sp, #1008]\t@ 0x3f0\n \tmovs\tr2, r1\n-\tldr\tr7, [pc, #184]\t@ (3c44e4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1f4c>)\n+\tldr\tr7, [pc, #216]\t@ (3c4504 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1f6c>)\n \tmovs\tr3, r0\n-\tldr\tr7, [pc, #272]\t@ (3c4540 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fa8>)\n+\tldr\tr7, [pc, #304]\t@ (3c4560 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fc8>)\n \tmovs\tr3, r0\n \tsubs\tr6, r3, r3\n \tmovs\tr2, r0\n \tsubs\tr6, r2, r3\n \tmovs\tr2, r0\n \tsubs\tr6, r1, r3\n \tmovs\tr2, r0\n-\tldr\tr7, [pc, #88]\t@ (3c4498 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1f00>)\n+\tldr\tr7, [pc, #120]\t@ (3c44b8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1f20>)\n \tmovs\tr3, r0\n-\tldr\tr6, [pc, #1008]\t@ (3c4834 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x229c>)\n+\tldr\tr7, [pc, #16]\t@ (3c4454 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1ebc>)\n \tmovs\tr3, r0\n \tsubs\tr6, r5, r2\n \tmovs\tr2, r0\n guessFileAndZipType(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&, unsigned char&):\n /usr/include/boost/algorithm/string/predicate.hpp:345 (discriminator 11)\n \tadd\tr0, sp, #64\t@ 0x40\n \tblx\tbcd0 \n@@ -1972013,59 +1972013,59 @@\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tldrh\tr0, [r4, #20]\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr6, [r7, #18]\n \tmovs\tr6, r1\n-\tcmp\tr4, #22\n+\tcmp\tr4, #30\n \tmovs\tr4, r0\n-\tstr\tr2, [r1, #104]\t@ 0x68\n+\tstr\tr6, [r2, #104]\t@ 0x68\n \tmovs\tr2, r0\n-\tstr\tr4, [sp, #792]\t@ 0x318\n+\tstr\tr4, [sp, #840]\t@ 0x348\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #952]\t@ (3c4a38 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x24a0>)\n+\tldr\tr6, [pc, #1000]\t@ (3c4a68 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x24d0>)\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #888]\t@ (3c49fc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2464>)\n+\tldr\tr6, [pc, #936]\t@ (3c4a2c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2494>)\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #808]\t@ (3c49b0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2418>)\n+\tldr\tr6, [pc, #856]\t@ (3c49e0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2448>)\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #744]\t@ (3c4974 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x23dc>)\n+\tldr\tr6, [pc, #792]\t@ (3c49a4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x240c>)\n \tmovs\tr2, r0\n-\tstr\tr4, [sp, #496]\t@ 0x1f0\n+\tstr\tr4, [sp, #544]\t@ 0x220\n \tmovs\tr2, r0\n-\tstr\tr6, [r6, #92]\t@ 0x5c\n+\tstr\tr2, [r0, #96]\t@ 0x60\n \tmovs\tr2, r0\n-\tstr\tr0, [r6, #92]\t@ 0x5c\n+\tstr\tr4, [r7, #92]\t@ 0x5c\n \tmovs\tr2, r0\n-\tstr\tr2, [r3, #96]\t@ 0x60\n+\tstr\tr6, [r4, #96]\t@ 0x60\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #464]\t@ (3c4870 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22d8>)\n+\tldr\tr6, [pc, #512]\t@ (3c48a0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2308>)\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #440]\t@ (3c485c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22c4>)\n+\tldr\tr6, [pc, #488]\t@ (3c488c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22f4>)\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #368]\t@ (3c4818 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2280>)\n+\tldr\tr6, [pc, #416]\t@ (3c4848 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b0>)\n \tmovs\tr2, r0\n-\tldr\tr6, [pc, #280]\t@ (3c47c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x222c>)\n+\tldr\tr6, [pc, #328]\t@ (3c47f4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x225c>)\n \tmovs\tr2, r0\n-\tstr\tr6, [sp, #1008]\t@ 0x3f0\n+\tstr\tr7, [sp, #16]\n \tmovs\tr7, r0\n-\tstr\tr6, [r4, #88]\t@ 0x58\n+\tstr\tr2, [r6, #88]\t@ 0x58\n \tmovs\tr2, r0\n-\tbge.n\t3c4668 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20d0>\n+\tbge.n\t3c4678 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20e0>\n \tmovs\tr3, r0\n-\tbge.n\t3c4658 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20c0>\n+\tbge.n\t3c4668 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20d0>\n \tmovs\tr3, r0\n-\tbge.n\t3c4650 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20b8>\n+\tbge.n\t3c4660 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20c8>\n \tmovs\tr3, r0\n-\tstr\tr3, [sp, #840]\t@ 0x348\n+\tstr\tr3, [sp, #888]\t@ 0x378\n \tmovs\tr2, r0\n-\tstr\tr6, [sp, #632]\t@ 0x278\n+\tstr\tr6, [sp, #664]\t@ 0x298\n \tmovs\tr7, r0\n-\tstr\tr2, [r0, #84]\t@ 0x54\n+\tstr\tr6, [r1, #84]\t@ 0x54\n \tmovs\tr2, r0\n checkForNFSMountOnDirectory(std::__cxx11::basic_string, std::allocator > const&, bool):\n ./src/util/fileanddisk.C:986\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr2, [pc, #724]\t@ (3c49a8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2410>)\n \tsub\tsp, #92\t@ 0x5c\n@@ -1972623,29 +1972623,29 @@\n \tnop\n \tldrh\tr0, [r1, #4]\n \tmovs\tr6, r1\n \tldrh\tr2, [r6, #2]\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstr\tr5, [sp, #648]\t@ 0x288\n+\tstr\tr5, [sp, #680]\t@ 0x2a8\n \tmovs\tr7, r0\n \tstrh\tr6, [r4, #60]\t@ 0x3c\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [sp, #64]\t@ 0x40\n+\tstr\tr4, [sp, #96]\t@ 0x60\n \tmovs\tr7, r0\n-\tstr\tr4, [sp, #144]\t@ 0x90\n+\tstr\tr4, [sp, #176]\t@ 0xb0\n \tmovs\tr7, r0\n-\tadds\tr0, r5, #2\n+\tadds\tr4, r6, #2\n \tmovs\tr2, r0\n \tasrs\tr6, r4, #18\n \tmovs\tr2, r0\n-\tsbcs\tr2, r4\n+\tsbcs\tr6, r5\n \tmovs\tr2, r0\n globWalkPath(std::__cxx11::basic_string, std::allocator >, std::__cxx11::list >&):\n ./src/util/fileanddisk.C:896\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr4, [pc, #2984]\t@ 3c5584 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2fec>\n \tvpush\t{d8-d11}\n@@ -1974731,37 +1974731,37 @@\n \tb.n\t3c544c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2eb4>\n \tstrh\tr6, [r6, #42]\t@ 0x2a\n \tmovs\tr6, r1\n \tstrh\tr6, [r2, #42]\t@ 0x2a\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr6, #68\t@ 0x44\n+\tmovs\tr6, #76\t@ 0x4c\n \tmovs\tr4, r0\n-\tstr\tr3, [sp, #632]\t@ 0x278\n+\tstr\tr3, [sp, #664]\t@ 0x298\n \tmovs\tr7, r0\n-\tstr\tr3, [sp, #832]\t@ 0x340\n+\tstr\tr3, [sp, #864]\t@ 0x360\n \tmovs\tr7, r0\n-\tstr\tr3, [sp, #416]\t@ 0x1a0\n+\tstr\tr3, [sp, #448]\t@ 0x1c0\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr2, [sp, #360]\t@ 0x168\n+\tstr\tr2, [sp, #392]\t@ 0x188\n \tmovs\tr7, r0\n \tstrh\tr6, [r0, #12]\n \tmovs\tr6, r1\n-\tldrh\tr0, [r4, #60]\t@ 0x3c\n+\tldrh\tr0, [r5, #60]\t@ 0x3c\n \tmovs\tr7, r0\n-\tldrh\tr4, [r3, #60]\t@ 0x3c\n+\tldrh\tr4, [r4, #60]\t@ 0x3c\n \tmovs\tr7, r0\n-\tldrh\tr4, [r2, #58]\t@ 0x3a\n+\tldrh\tr4, [r3, #58]\t@ 0x3a\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tlsrs\tr0, r1, #13\n+\tlsrs\tr0, r2, #13\n \tmovs\tr3, r0\n std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*):\n /usr/include/c++/10/ostream:611\n \tldr.w\tr0, [pc, #2796]\t@ 3c60b0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x3b18>\n \tldr\tr2, [sp, #12]\n \tldr.w\tr1, [pc, #2796]\t@ 3c60b4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x3b1c>\n \tldr\tr7, [r2, r0]\n@@ -1976752,17 +1976752,17 @@\n \tbeq.w\t3c5570 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2fd8>\n std::basic_streambuf >::epptr() const:\n /usr/include/c++/10/streambuf:542\n \tldrd\tr3, r2, [r4, #20]\n \tb.n\t3c5974 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x33dc>\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrh\tr4, [r7, #60]\t@ 0x3c\n+\tstrh\tr4, [r0, #62]\t@ 0x3e\n \tmovs\tr7, r0\n-\tstrh\tr0, [r5, #60]\t@ 0x3c\n+\tstrh\tr0, [r6, #60]\t@ 0x3c\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::basic_streambuf >::sputc(char):\n /usr/include/c++/10/streambuf:441\n \tldr\tr3, [r4, #0]\n \tmov\tr0, r4\n@@ -1977612,33 +1977612,33 @@\n \tmovs\tr6, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tldrb\tr4, [r2, #13]\n+\tldrb\tr4, [r3, #13]\n \tmovs\tr7, r0\n-\tmovs\tr2, #98\t@ 0x62\n+\tmovs\tr2, #106\t@ 0x6a\n \tmovs\tr3, r0\n-\tldrb\tr2, [r6, #12]\n+\tldrb\tr2, [r7, #12]\n \tmovs\tr7, r0\n-\tldrb\tr4, [r2, #12]\n+\tldrb\tr4, [r3, #12]\n \tmovs\tr7, r0\n-\tb.n\t3c61bc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x3c24>\n+\tb.n\t3c61cc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x3c34>\n \tmovs\tr5, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldr\tr2, [r1, #44]\t@ 0x2c\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrb\tr6, [r7, #7]\n+\tldrb\tr6, [r0, #8]\n \tmovs\tr7, r0\n countLinesInFile(std::__cxx11::basic_string, std::allocator > const&):\n ./src/util/fileanddisk.C:303\n \tldr\tr2, [pc, #936]\t@ (3c6994 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x43fc>)\n \tldr\tr3, [pc, #940]\t@ (3c6998 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x4400>)\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tadd\tr2, pc\n@@ -1978247,17 +1978247,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrh\tr4, [r4, #46]\t@ 0x2e\n+\tstrh\tr0, [r6, #46]\t@ 0x2e\n \tmovs\tr2, r0\n-\tstrb\tr6, [r1, #26]\n+\tstrb\tr6, [r2, #26]\n \tmovs\tr7, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n fileCopy(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/util/fileanddisk.C:583\n@@ -1978749,19 +1978749,19 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tstr\tr0, [r5, #52]\t@ 0x34\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstrb\tr4, [r4, #13]\n+\tstrb\tr4, [r5, #13]\n \tmovs\tr7, r0\n-\tstrb\tr2, [r2, #13]\n+\tstrb\tr2, [r3, #13]\n \tmovs\tr7, r0\n-\tstrb\tr2, [r0, #12]\n+\tstrb\tr2, [r1, #12]\n \tmovs\tr7, r0\n myGZRead(gzFile_s*&, void*, unsigned long long):\n ./src/util/fileanddisk.C:140\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n \tldr.w\tr4, [pc, #3220]\t@ 3c79e8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x5450>\n \tvpush\t{d8}\n@@ -1980987,37 +1980987,37 @@\n \tnop\n \tstr\tr0, [r7, #28]\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr6, [r6, #28]\n \tmovs\tr6, r1\n-\tstrb\tr6, [r2, #5]\n+\tstrb\tr6, [r3, #5]\n \tmovs\tr7, r0\n-\tstrb\tr4, [r1, #5]\n+\tstrb\tr4, [r2, #5]\n \tmovs\tr7, r0\n-\tstrb\tr4, [r1, #0]\n+\tstrb\tr4, [r2, #0]\n \tmovs\tr7, r0\n-\tasrs\tr0, r1, #18\n+\tasrs\tr0, r2, #18\n \tmovs\tr3, r0\n-\tldr\tr2, [r6, #96]\t@ 0x60\n+\tldr\tr2, [r7, #96]\t@ 0x60\n \tmovs\tr7, r0\n-\tldr\tr6, [r5, #96]\t@ 0x60\n+\tldr\tr6, [r6, #96]\t@ 0x60\n \tmovs\tr7, r0\n-\tldr\tr2, [r2, #84]\t@ 0x54\n+\tldr\tr2, [r3, #84]\t@ 0x54\n \tmovs\tr7, r0\n-\tldr\tr6, [r4, #80]\t@ 0x50\n+\tldr\tr6, [r5, #80]\t@ 0x50\n \tmovs\tr7, r0\n-\tldr\tr6, [r0, #68]\t@ 0x44\n+\tldr\tr6, [r1, #68]\t@ 0x44\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tldrh\tr0, [r0, r2]\n \tmovs\tr6, r1\n-\tldr\tr2, [r7, #52]\t@ 0x34\n+\tldr\tr2, [r0, #56]\t@ 0x38\n \tmovs\tr7, r0\n \tsubs\tr3, r6, #1\n \tuxtb\tr2, r3\n \tb.n\t3c7952 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x53ba>\n \tsubs\tr1, r6, #1\n \tuxtb\tr2, r1\n \tb.n\t3c78d4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x533c>\n@@ -1981445,39 +1981445,39 @@\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n std::__cxx11::basic_string, std::allocator >::_M_destroy(unsigned int):\n /usr/include/c++/10/bits/basic_string.h:237\n \tb.n\t3c7b3c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x55a4>\n \tnop\n-\tasrs\tr4, r3, #2\n+\tasrs\tr0, r5, #2\n \tmovs\tr2, r0\n-\tasrs\tr4, r2, #2\n+\tasrs\tr0, r4, #2\n \tmovs\tr2, r0\n-\tasrs\tr4, r1, #2\n+\tasrs\tr0, r3, #2\n \tmovs\tr2, r0\n-\tasrs\tr4, r0, #2\n+\tasrs\tr0, r2, #2\n \tmovs\tr2, r0\n-\tasrs\tr4, r7, #1\n+\tasrs\tr0, r1, #2\n \tmovs\tr2, r0\n-\tasrs\tr4, r6, #1\n+\tasrs\tr0, r0, #2\n \tmovs\tr2, r0\n-\tasrs\tr4, r5, #1\n+\tasrs\tr0, r7, #1\n \tmovs\tr2, r0\n-\tasrs\tr4, r4, #1\n+\tasrs\tr0, r6, #1\n \tmovs\tr2, r0\n-\tasrs\tr0, r3, #1\n+\tasrs\tr4, r4, #1\n \tmovs\tr2, r0\n-\tstr\tr6, [r3, #88]\t@ 0x58\n+\tstr\tr6, [r4, #88]\t@ 0x58\n \tmovs\tr7, r0\n-\tstr\tr4, [r4, #88]\t@ 0x58\n+\tstr\tr4, [r5, #88]\t@ 0x58\n \tmovs\tr7, r0\n-\tstr\tr6, [r4, #88]\t@ 0x58\n+\tstr\tr6, [r5, #88]\t@ 0x58\n \tmovs\tr7, r0\n-\tasrs\tr6, r4, #32\n+\tasrs\tr2, r6, #32\n \tmovs\tr2, r0\n removeDirectory(std::__cxx11::basic_string, std::allocator > const&, bool, bool):\n ./src/util/fileanddisk.C:402\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr6, [pc, #1048]\t@ 3c80c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x5b2c>\n \tvpush\t{d8}\n@@ -1982210,45 +1982210,45 @@\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r3, #2\n \tmovs\tr0, r0\n \tstrh\tr0, [r3, r0]\n \tmovs\tr6, r1\n-\tstr\tr2, [r5, #72]\t@ 0x48\n+\tstr\tr2, [r6, #72]\t@ 0x48\n \tmovs\tr7, r0\n-\tstr\tr0, [r4, #76]\t@ 0x4c\n+\tstr\tr0, [r5, #76]\t@ 0x4c\n \tmovs\tr7, r0\n-\tstr\tr4, [r4, #72]\t@ 0x48\n+\tstr\tr4, [r5, #72]\t@ 0x48\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tasrs\tr6, r2, #29\n+\tasrs\tr2, r4, #29\n \tmovs\tr2, r0\n-\tstr\tr0, [r7, #36]\t@ 0x24\n+\tstr\tr0, [r0, #40]\t@ 0x28\n \tmovs\tr7, r0\n-\tstr\tr2, [r6, #36]\t@ 0x24\n+\tstr\tr2, [r7, #36]\t@ 0x24\n \tmovs\tr7, r0\n-\tstr\tr0, [r3, #36]\t@ 0x24\n+\tstr\tr0, [r4, #36]\t@ 0x24\n \tmovs\tr7, r0\n-\tstr\tr2, [r7, #44]\t@ 0x2c\n+\tstr\tr2, [r0, #48]\t@ 0x30\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstr\tr0, [r2, #24]\n+\tstr\tr0, [r3, #24]\n \tmovs\tr7, r0\n-\tldr\tr0, [r1, #80]\t@ 0x50\n+\tldr\tr0, [r2, #80]\t@ 0x50\n \tmovs\tr3, r0\n \tudf\t#68\t@ 0x44\n \tmovs\tr1, r0\n \tudf\t#60\t@ 0x3c\n \tmovs\tr1, r0\n \tudf\t#52\t@ 0x34\n \tmovs\tr1, r0\n-\tstr\tr0, [r7, #28]\n+\tstr\tr0, [r0, #32]\n \tmovs\tr7, r0\n createDirectory(std::__cxx11::basic_string, std::allocator > const&, bool, bool):\n ./src/util/fileanddisk.C:466\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n ./src/util/fileanddisk.C:467\n \tmovs\tr3, #0\n ./src/util/fileanddisk.C:466\n@@ -1982962,49 +1982962,49 @@\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr6, [pc, #160]\t@ (3c8614 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x607c>)\n \tmovs\tr6, r1\n \tasrs\tr0, r3, #2\n \tmovs\tr0, r0\n-\tstr\tr4, [r5, #16]\n+\tstr\tr4, [r6, #16]\n \tmovs\tr7, r0\n-\tstr\tr6, [r7, #12]\n+\tstr\tr6, [r0, #16]\n \tmovs\tr7, r0\n-\tstr\tr4, [r4, #16]\n+\tstr\tr4, [r5, #16]\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr6, [r7, #8]\n+\tstr\tr6, [r0, #12]\n \tmovs\tr7, r0\n-\tstr\tr6, [r6, #8]\n+\tstr\tr6, [r7, #8]\n \tmovs\tr7, r0\n-\tldrsh\tr4, [r1, r4]\n+\tldrsh\tr4, [r2, r4]\n \tmovs\tr7, r0\n-\tldrsh\tr6, [r5, r6]\n+\tldrsh\tr6, [r6, r6]\n \tmovs\tr7, r0\n-\tldrsh\tr2, [r6, r6]\n+\tldrsh\tr2, [r7, r6]\n \tmovs\tr7, r0\n-\tldr\tr6, [pc, #744]\t@ (3c8888 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x62f0>)\n+\tldr\tr6, [pc, #776]\t@ (3c88a8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6310>)\n \tmovs\tr3, r0\n \tldr\tr3, [pc, #952]\t@ (3c895c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x63c4>)\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldrsh\tr2, [r7, r0]\n+\tldrsh\tr2, [r0, r1]\n \tmovs\tr7, r0\n-\tldr\tr6, [r1, #4]\n+\tldr\tr6, [r2, #4]\n \tmovs\tr3, r0\n-\tasrs\tr4, r0, #5\n+\tasrs\tr0, r2, #5\n \tmovs\tr2, r0\n \tbls.n\t3c86ac , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6114>\n \tmovs\tr1, r0\n \tbls.n\t3c8698 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6100>\n \tmovs\tr1, r0\n-\tldrb\tr2, [r3, r5]\n+\tldrb\tr2, [r4, r5]\n \tmovs\tr7, r0\n purgeCreateDir(std::__cxx11::basic_string, std::allocator > const&, bool, bool):\n ./src/util/fileanddisk.C:385\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n \tmov\tr5, r1\n \tmov\tr6, r2\n@@ -1983819,39 +1983819,39 @@\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r3, #2\n \tmovs\tr0, r0\n \tldr\tr0, [pc, #448]\t@ (3c8c2c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6694>)\n \tmovs\tr6, r1\n-\tldrb\tr6, [r0, r2]\n+\tldrb\tr6, [r1, r2]\n \tmovs\tr7, r0\n-\tldrh\tr4, [r6, r4]\n+\tldrh\tr4, [r7, r4]\n \tmovs\tr7, r0\n-\tldrb\tr0, [r0, r2]\n+\tldrb\tr0, [r1, r2]\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldrh\tr0, [r2, r4]\n+\tldrh\tr0, [r3, r4]\n \tmovs\tr7, r0\n-\tldr\tr6, [r0, r5]\n+\tldr\tr6, [r1, r5]\n \tmovs\tr7, r0\n-\tldrh\tr4, [r5, r2]\n+\tldrh\tr4, [r6, r2]\n \tmovs\tr7, r0\n-\tldr\tr6, [r0, r7]\n+\tldr\tr6, [r1, r7]\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n \tbmi.n\t3c8a1c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6484>\n \tmovs\tr1, r0\n \tbmi.n\t3c8a10 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6478>\n \tmovs\tr1, r0\n \tbmi.n\t3c89fc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6464>\n \tmovs\tr1, r0\n-\tldr\tr4, [r2, r2]\n+\tldr\tr4, [r3, r2]\n \tmovs\tr7, r0\n fileRename(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&):\n ./src/util/fileanddisk.C:612\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr\tr2, [pc, #400]\t@ (3c8c38 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x66a0>)\n \tsub\tsp, #60\t@ 0x3c\n@@ -1984719,15 +1984719,15 @@\n ./src/util/misc.C:60\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \tsubs\tr7, #178\t@ 0xb2\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstrb\tr6, [r0, r0]\n+\tstrb\tr6, [r1, r0]\n \tmovs\tr7, r0\n \tsubs\tr7, #106\t@ 0x6a\n \tmovs\tr6, r1\n ctout(char*):\n ./src/util/misc.C:64\n \tpush\t{r4, lr}\n ./src/util/misc.C:67\n@@ -1985369,23 +1985369,23 @@\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tsubs\tr5, #112\t@ 0x70\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tmovs\tr0, r0\n \tsubs\tr6, #176\t@ 0xb0\n-\tstr\tr2, [r4, r1]\n+\tstr\tr2, [r5, r1]\n \tmovs\tr7, r0\n-\tstr\tr2, [r7, r0]\n+\tstr\tr2, [r0, r1]\n \tmovs\tr7, r0\n-\tstr\tr0, [r2, r0]\n+\tstr\tr0, [r3, r0]\n \tmovs\tr7, r0\n-\tstr\tr6, [r1, r0]\n+\tstr\tr6, [r2, r0]\n \tmovs\tr7, r0\n-\tldr\tr7, [pc, #920]\t@ (3c9804 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x726c>)\n+\tldr\tr7, [pc, #952]\t@ (3c9824 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x728c>)\n \tmovs\tr7, r0\n getSTDOUTFromCommand(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator >&):\n ./src/util/misc.C:198\n \tpush\t{r4, r5, r6, r7, lr}\n \tmov\tr4, r1\n \tldr\tr1, [pc, #152]\t@ (3c950c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6f74>)\n \tldr\tr2, [pc, #156]\t@ (3c9510 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6f78>)\n@@ -1985477,18 +1985477,18 @@\n ./src/util/misc.C:215\n \tblx\tb2d4 <__stack_chk_fail@plt>\n \tnop\n \tsubs\tr2, #234\t@ 0xea\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tadc.w\tr0, r4, #6\n+\tadc.w\tr0, ip, #6\n \tsubs\tr2, #118\t@ 0x76\n \tmovs\tr6, r1\n-\taddw\tr0, r4, #2049\t@ 0x801\n+\t\t\t@ instruction: 0xf6100001\n checkRunabilityOfCommand(std::__cxx11::basic_string, std::allocator >):\n /usr/include/c++/10/bits/basic_string.h:322\n \tldr\tr2, [r0, #4]\n \tmvn.w\tr3, #3221225472\t@ 0xc0000000\n ./src/util/misc.C:225\n \tpush\t{r4, lr}\n /usr/include/c++/10/bits/basic_string.h:322\n@@ -1985508,17 +1985508,17 @@\n \tclz\tr0, r0\n \tlsrs\tr0, r0, #5\n \tpop\t{r4, pc}\n /usr/include/c++/10/bits/basic_string.h:323\n \tldr\tr0, [pc, #8]\t@ (3c9554 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x6fbc>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tldr\tr6, [pc, #848]\t@ (3c98a4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x730c>)\n+\tldr\tr6, [pc, #880]\t@ (3c98c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x732c>)\n \tmovs\tr7, r0\n-\tsubs.w\tr0, sl, #8454144\t@ 0x810000\n+\trsb\tr0, r6, #8454144\t@ 0x810000\n gff3Decode(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator >&):\n ./src/util/misc.C:240\n \tldr\tr2, [pc, #348]\t@ (3c96b8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7120>)\n \tldr\tr3, [pc, #352]\t@ (3c96bc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7124>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr8, r0\n@@ -1985966,17 +1985966,17 @@\n \tstr\tr1, [sp, #12]\n \tblx\tb0a4 , std::allocator >::_M_mutate(unsigned int, unsigned int, char const*, unsigned int)@plt>\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr.w\tr3, [r9]\n \tldr\tr1, [sp, #12]\n \tb.n\t3c9752 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x71ba>\n \tnop\n-\tldr\tr5, [pc, #816]\t@ (3c9b84 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x75ec>)\n+\tldr\tr5, [pc, #848]\t@ (3c9ba4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x760c>)\n \tmovs\tr7, r0\n-\tldr\tr5, [pc, #808]\t@ (3c9b80 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x75e8>)\n+\tldr\tr5, [pc, #840]\t@ (3c9ba0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7608>)\n \tmovs\tr7, r0\n htmlCode(std::__cxx11::basic_string, std::allocator > const&):\n ./src/util/misc.C:321\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr3, #0\n ./src/util/misc.C:321\n@@ -1986185,17 +1986185,17 @@\n /usr/include/c++/10/bits/basic_string.h:237\n \tldr\tr1, [r4, #8]\n /usr/include/c++/10/ext/new_allocator.h:133\n \tadds\tr1, #1\n \tblx\tb538 \n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n-\tldr\tr4, [pc, #248]\t@ (3c9ab0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7518>)\n+\tldr\tr4, [pc, #280]\t@ (3c9ad0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7538>)\n \tmovs\tr7, r0\n-\tldr\tr4, [pc, #232]\t@ (3c9aa4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x750c>)\n+\tldr\tr4, [pc, #264]\t@ (3c9ac4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x752c>)\n \tmovs\tr7, r0\n dbgOpenWiggle(std::basic_ofstream >&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, unsigned int):\n ./src/util/misc.C:349\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr4, r0\n /usr/include/c++/10/fstream:332\n \tldr\tr1, [r1, #0]\n@@ -1986269,21 +1986269,21 @@\n /usr/include/c++/10/bits/ios_base.h:170\n \tldr\tr1, [r0, #20]\n /usr/include/c++/10/bits/basic_ios.h:158\n \torr.w\tr1, r1, #4\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n /usr/include/c++/10/fstream:968\n \tb.n\t3c99e0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7448>\n-\tmovs\tr2, #50\t@ 0x32\n+\tmovs\tr2, #58\t@ 0x3a\n \tmovs\tr4, r0\n-\tldr\tr2, [pc, #128]\t@ (3c9ad0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7538>)\n+\tldr\tr2, [pc, #160]\t@ (3c9af0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x7558>)\n \tmovs\tr7, r0\n-\tldr\tr2, [pc, #240]\t@ (3c9b44 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x75ac>)\n+\tldr\tr2, [pc, #272]\t@ (3c9b64 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x75cc>)\n \tmovs\tr7, r0\n-\tldr\tr2, [pc, #496]\t@ (3c9c48 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x76b0>)\n+\tldr\tr2, [pc, #528]\t@ (3c9c68 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x76d0>)\n \tmovs\tr7, r0\n std::basic_ostream >& std::endl >(std::basic_ostream >&) [clone .isra.0]:\n /usr/include/c++/10/ostream:682\n \tldr\tr3, [r0, #0]\n /usr/include/c++/10/ostream:681\n \tpush\t{r4, r5, r6, lr}\n \tldr\tr6, [pc, #68]\t@ (3c9aa4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x750c>)\n@@ -1988263,15 +1988263,15 @@\n /usr/include/c++/10/bits/stl_bvector.h:1048\n \tb.w\tbfb78 , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0x1b9e0>\n \tnop\n \tmovs\tr7, #224\t@ 0xe0\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tsubs\tr3, #236\t@ 0xec\n+\tsubs\tr3, #244\t@ 0xf4\n \tmovs\tr7, r0\n dptools::dnaToProtein(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&, unsigned int, unsigned int, signed char, unsigned char, unsigned char, bool):\n ./src/util/dptools.C:697\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr.w\tr5, [pc, #2104]\t@ 3cb198 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x8c00>\n \tldr.w\tr4, [pc, #2104]\t@ 3cb19c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x8c04>\n \tadd\tr5, pc\n@@ -1989463,27 +1989463,27 @@\n \tmovs\tr6, r1\n \tmovs\tr2, #164\t@ 0xa4\n \tmovs\tr6, r1\n \tsubs\tr1, #114\t@ 0x72\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr4, #222\t@ 0xde\n+\tadds\tr4, #230\t@ 0xe6\n \tmovs\tr7, r0\n-\tadds\tr4, #172\t@ 0xac\n+\tadds\tr4, #180\t@ 0xb4\n \tmovs\tr7, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadds\tr4, #64\t@ 0x40\n+\tadds\tr4, #72\t@ 0x48\n \tmovs\tr7, r0\n-\tadds\tr4, #90\t@ 0x5a\n+\tadds\tr4, #98\t@ 0x62\n \tmovs\tr7, r0\n-\tadds\tr3, #212\t@ 0xd4\n+\tadds\tr3, #220\t@ 0xdc\n \tmovs\tr7, r0\n-\tadds\tr3, #236\t@ 0xec\n+\tadds\tr3, #244\t@ 0xf4\n \tmovs\tr7, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n dptools::infoOnAAatDNAPos(std::__cxx11::basic_string, std::allocator > const&, unsigned int, unsigned int, signed char, unsigned char, unsigned char, std::__cxx11::basic_string, std::allocator >&, std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::vector >&, std::vector >&, int&, signed char&):\n ./src/util/dptools.C:836\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tldr\tr5, [pc, #728]\t@ (3cb4b0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x8f18>)\n@@ -1989897,21 +1989897,21 @@\n \tmovs\tr6, r1\n \tadds\tr2, r1, #2\n \tmovs\tr6, r1\n \tadds\tr4, #64\t@ 0x40\n \tmovs\tr6, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadds\tr1, #114\t@ 0x72\n+\tadds\tr1, #122\t@ 0x7a\n \tmovs\tr7, r0\n-\tadds\tr0, #252\t@ 0xfc\n+\tadds\tr1, #4\n \tmovs\tr7, r0\n-\tadds\tr1, #24\n+\tadds\tr1, #32\n \tmovs\tr7, r0\n-\tadds\tr0, #144\t@ 0x90\n+\tadds\tr0, #152\t@ 0x98\n \tmovs\tr7, r0\n void std::__adjust_heap(char*, int, int, char, __gnu_cxx::__ops::_Iter_less_iter) [clone .isra.0]:\n /usr/include/c++/10/bits/stl_heap.h:223\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n /usr/include/c++/10/bits/stl_heap.h:228\n \tadd.w\tr8, r2, #4294967295\t@ 0xffffffff\n /usr/include/c++/10/bits/stl_heap.h:237\n@@ -1990846,21 +1990846,21 @@\n \tblx\tbe10 \n \tasrs\tr6, r0, #17\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcmp\tr2, #224\t@ 0xe0\n+\tcmp\tr2, #232\t@ 0xe8\n \tmovs\tr7, r0\n-\tcmp\tr2, #230\t@ 0xe6\n+\tcmp\tr2, #238\t@ 0xee\n \tmovs\tr7, r0\n-\tldmia\tr7!, {r1, r3, r4, r6}\n+\tldmia\tr7!, {r1, r5, r6}\n \tmovs\tr6, r0\n-\tcmp\tr2, #252\t@ 0xfc\n+\tcmp\tr3, #4\n \tmovs\tr7, r0\n AnnotationMappings::zeroVars():\n ./src/io/annotationmappings.C:61\n \tbx\tlr\n \tnop\n AnnotationMappings::init():\n ./src/io/annotationmappings.C:75\n@@ -1990907,21 +1990907,21 @@\n \tblx\tbe10 \n \tasrs\tr6, r3, #15\n \tmovs\tr6, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tcmp\tr2, #120\t@ 0x78\n+\tcmp\tr2, #128\t@ 0x80\n \tmovs\tr7, r0\n-\tcmp\tr2, #194\t@ 0xc2\n+\tcmp\tr2, #202\t@ 0xca\n \tmovs\tr7, r0\n-\tldmia\tr6, {r1, r4, r5, r6, r7}\n+\tldmia\tr6, {r1, r3, r4, r5, r6, r7}\n \tmovs\tr6, r0\n-\tcmp\tr2, #148\t@ 0x94\n+\tcmp\tr2, #156\t@ 0x9c\n \tmovs\tr7, r0\n AnnotationMappings::discard():\n ./src/io/annotationmappings.C:85\n \tbx\tlr\n \tnop\n std::vector, std::allocator >, std::allocator, std::allocator > > >& boost::algorithm::iter_split, std::allocator >, std::allocator, std::allocator > > >, std::__cxx11::basic_string, std::allocator >&, boost::algorithm::detail::token_finderF > >(std::vector, std::allocator >, std::allocator, std::allocator > > >&, std::__cxx11::basic_string, std::allocator >&, boost::algorithm::detail::token_finderF >) [clone .isra.0]:\n /usr/include/boost/algorithm/string/iter_find.hpp:147\n@@ -1994201,15 +1994201,15 @@\n \tmov\tr6, r2\n \tb.n\t3cd2e0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xad48>\n \tnop\n \tlsrs\tr0, r0, #32\n \tmovs\tr6, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tmovs\tr0, #226\t@ 0xe2\n+\tmovs\tr0, #234\t@ 0xea\n \tmovs\tr7, r0\n \tlsls\tr0, r2, #31\n \tmovs\tr6, r1\n \tldr\tr6, [r2, #124]\t@ 0x7c\n \tmovs\tr0, r2\n \tldr\tr4, [r2, #124]\t@ 0x7c\n \tmovs\tr0, r2\n@@ -1994217,40 +1994217,40 @@\n \tmovs\tr0, r2\n \tldr\tr4, [r0, #108]\t@ 0x6c\n \tmovs\tr0, r2\n \tldr\tr6, [r4, #104]\t@ 0x68\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr3, pc, #288\t@ (adr r3, 3cd3c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xae2c>)\n+\tadd\tr3, pc, #320\t@ (adr r3, 3cd3e4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xae4c>)\n \tmovs\tr1, r1\n \tldr\tr0, [r2, #88]\t@ 0x58\n \tmovs\tr0, r2\n \tldr\tr2, [r1, #88]\t@ 0x58\n \tmovs\tr0, r2\n \tldr\tr4, [r0, #88]\t@ 0x58\n \tmovs\tr0, r2\n \tldr\tr2, [r0, #88]\t@ 0x58\n \tmovs\tr0, r2\n-\tsmmls\tr0, r6, r7, r0\n-\tsubs\tr0, r7, r0\n+\tsmmls\tr0, lr, r7, r0\n+\tsubs\tr0, r0, r1\n \tmovs\tr7, r0\n-\tsubs\tr2, r7, r0\n+\tsubs\tr2, r0, r1\n \tmovs\tr7, r0\n-\tsubs\tr0, r0, r1\n+\tsubs\tr0, r1, r1\n \tmovs\tr7, r0\n-\tsubs\tr6, r6, r1\n+\tsubs\tr6, r7, r1\n \tmovs\tr7, r0\n \tldr\tr0, [r2, #20]\n \tmovs\tr0, r2\n \tldr\tr4, [r1, #20]\n \tmovs\tr0, r2\n \tstr\tr2, [r1, #116]\t@ 0x74\n \tmovs\tr0, r2\n-\tadds\tr0, r2, r2\n+\tadds\tr0, r3, r2\n \tmovs\tr7, r0\n \tstr\tr2, [r6, #100]\t@ 0x64\n \tmovs\tr0, r2\n /usr/include/boost/multi_index/detail/ord_index_node.hpp:638\n \tsub.w\tr5, r2, #60\t@ 0x3c\n /usr/include/c++/10/bits/basic_string.h:6277\n \tldrd\tr8, r7, [r5, #24]\n@@ -1996080,19 +1996080,19 @@\n ./src/io/annotationmappings.C:269\n \tldr\tr1, [pc, #168]\t@ (3ce08c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xbaf4>)\n \tadd\tr1, pc\n \tblx\tb694 >& std::operator<< >(std::basic_ostream >&, char const*)@plt+0x4>\n \tb.n\t3cdebc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xb924>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tasrs\tr0, r3, #9\n+\tasrs\tr0, r4, #9\n \tmovs\tr7, r0\n \tstr\tr6, [r0, #32]\n \tmovs\tr0, r2\n-\tlsls\tr6, r6, #2\n+\tlsls\tr6, r7, #2\n \tmovs\tr2, r1\n \tstr\tr2, [r0, #20]\n \tmovs\tr0, r2\n \tstr\tr4, [r4, #0]\n \tmovs\tr0, r2\n \tldrsh\tr6, [r6, r7]\n \tmovs\tr0, r2\n@@ -1996107,64 +1996107,64 @@\n \tldrsh\tr2, [r2, r3]\n \tmovs\tr0, r2\n \t\t\t@ instruction: 0xf65a000d\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrsh\tr4, [r5, r1]\n \tmovs\tr0, r2\n-\tlsrs\tr6, r2, #26\n+\tlsrs\tr6, r3, #26\n \tmovs\tr7, r0\n-\tstc2l\t0, cr0, [r2, #-36]\t@ 0xffffffdc\n+\tstc2l\t0, cr0, [sl, #-36]\t@ 0xffffffdc\n \tldrb\tr0, [r2, r7]\n \tmovs\tr0, r2\n \tldrb\tr2, [r1, r3]\n \tmovs\tr0, r2\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tlsrs\tr4, r1, #17\n+\tlsrs\tr4, r2, #17\n \tmovs\tr7, r0\n-\tlsls\tr0, r7, #7\n+\tlsls\tr0, r0, #8\n \tmovs\tr3, r0\n \tldrh\tr6, [r1, r5]\n \tmovs\tr0, r2\n \tldrh\tr0, [r0, r5]\n \tmovs\tr0, r2\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsrs\tr4, r6, #9\n+\tlsrs\tr4, r7, #9\n \tmovs\tr7, r0\n \tldr\tr0, [r6, r6]\n \tmovs\tr0, r2\n-\tlsrs\tr2, r4, #2\n+\tlsrs\tr2, r5, #2\n \tmovs\tr7, r0\n-\tlsrs\tr6, r5, #2\n+\tlsrs\tr6, r6, #2\n \tmovs\tr7, r0\n-\tlsrs\tr6, r6, #32\n+\tlsrs\tr6, r7, #32\n \tmovs\tr7, r0\n-\tlsrs\tr4, r5, #32\n+\tlsrs\tr4, r6, #32\n \tmovs\tr7, r0\n-\tlsrs\tr6, r3, #5\n+\tlsrs\tr6, r4, #5\n \tmovs\tr7, r0\n-\tlsls\tr2, r6, #29\n+\tlsls\tr2, r7, #29\n \tmovs\tr7, r0\n-\tlsls\tr0, r6, #29\n+\tlsls\tr0, r7, #29\n \tmovs\tr7, r0\n-\tlsrs\tr2, r2, #4\n+\tlsrs\tr2, r3, #4\n \tmovs\tr7, r0\n-\tlsrs\tr2, r7, #2\n+\tlsrs\tr2, r0, #3\n \tmovs\tr7, r0\n-\tlsrs\tr4, r6, #2\n+\tlsrs\tr4, r7, #2\n \tmovs\tr7, r0\n-\tlsrs\tr4, r0, #3\n+\tlsrs\tr4, r1, #3\n \tmovs\tr7, r0\n-\tlsls\tr2, r2, #31\n+\tlsls\tr2, r3, #31\n \tmovs\tr7, r0\n-\tlsls\tr2, r2, #29\n+\tlsls\tr2, r3, #29\n \tmovs\tr7, r0\n-\tlsrs\tr4, r0, #2\n+\tlsrs\tr4, r1, #2\n \tmovs\tr7, r0\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n /usr/include/c++/10/ostream:611\n \tldr.w\tlr, [pc, #740]\t@ 3ce37c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xbde4>\n \tldr\tr2, [sp, #16]\n \tldr\tr1, [pc, #740]\t@ (3ce380 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xbde8>)\n@@ -1996591,21 +1996591,21 @@\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t3ce1fc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xbc64>\n /usr/include/c++/10/bits/hashtable_policy.h:2042\n \tblx\tb958 <__cxa_end_catch@plt+0x4>\n \tb.n\t3ce19e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xbc06>\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tlsls\tr0, r0, #28\n+\tlsls\tr0, r1, #28\n \tmovs\tr7, r0\n-\tlsls\tr2, r6, #30\n+\tlsls\tr2, r7, #30\n \tmovs\tr7, r0\n-\tlsls\tr4, r1, #28\n+\tlsls\tr4, r2, #28\n \tmovs\tr7, r0\n-\tlsls\tr4, r1, #30\n+\tlsls\tr4, r2, #30\n \tmovs\tr7, r0\n boost::multi_index::detail::ordered_index_impl, std::allocator > const, boost::bimaps::relation::member_at::left>, boost::bimaps::tags::tagged, std::allocator > const, boost::bimaps::relation::member_at::right>, true>, std::__cxx11::basic_string, std::allocator >, &boost::bimaps::relation::detail::relation_storage, std::allocator > const, boost::bimaps::relation::member_at::left>, boost::bimaps::tags::tagged, std::allocator > const, boost::bimaps::relation::member_at::right>, true>::right>, std::less, std::allocator > >, boost::multi_index::detail::nth_layer<1, boost::bimaps::relation::mutant_relation, std::allocator > const, boost::bimaps::relation::member_at::left>, boost::bimaps::tags::tagged, std::allocator > const, boost::bimaps::relation::member_at::right>, mpl_::na, true>, boost::bimaps::detail::bimap_core, std::allocator >, std::__cxx11::basic_string, std::allocator >, mpl_::na, mpl_::na, mpl_::na>::core_indices, std::allocator, std::allocator > const, boost::bimaps::relation::member_at::left>, boost::bimaps::tags::tagged, std::allocator > const, boost::bimaps::relation::member_at::right>, mpl_::na, true> > >, boost::mpl::v_item, 0>, boost::multi_index::detail::ordered_unique_tag, boost::multi_index::detail::null_augment_policy>::delete_all_nodes(boost::multi_index::detail::ordered_index_node, std::allocator > const, boost::bimaps::relation::member_at::left>, boost::bimaps::tags::tagged, std::allocator > const, boost::bimaps::relation::member_at::right>, mpl_::na, true>, std::allocator, std::allocator > const, boost::bimaps::relation::member_at::left>, boost::bimaps::tags::tagged, std::allocator > const, boost::bimaps::relation::member_at::right>, mpl_::na, true> > > > >*) [clone .isra.0]:\n /usr/include/boost/multi_index/detail/ord_index_impl.hpp:1220\n \tcmp\tr0, #0\n \tbeq.w\t3ce7c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xc22c>\n /usr/include/boost/multi_index/detail/ord_index_impl.hpp:1218\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -1999001,17 +1999001,17 @@\n /usr/include/c++/10/bits/basic_string.h:187\n \tldr\tr1, [r4, #0]\n \tb.n\t3cf3bc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xce24>\n /usr/include/c++/10/bits/basic_string.h:323\n \tldr\tr0, [pc, #8]\t@ (3cf424 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xce8c>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\t\t\t@ instruction: 0xb73e\n+\t\t\t@ instruction: 0xb746\n \tmovs\tr2, r0\n-\tstr\tr6, [sp, #936]\t@ 0x3a8\n+\tstr\tr6, [sp, #984]\t@ 0x3d8\n \tmovs\tr1, r0\n tag_t::serialiseComment(std::__cxx11::basic_string, std::allocator >&) const:\n ./src/io/exp.C:80\n \tadds\tr0, #36\t@ 0x24\n \tb.w\t3cf340 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xcda8>\n \tnop\n tag_t::extractGenBankKeyValueFromComment(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator >&) const:\n@@ -1999303,27 +1999303,27 @@\n \tblx\tb05c \n \tblt.n\t3cf638 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd0a0>\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tblt.n\t3cf600 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd068>\n \tmovs\tr5, r1\n-\tbeq.n\t3cf6b4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd11c>\n+\tbeq.n\t3cf6c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd12c>\n \tmovs\tr1, r1\n-\t\t\t@ instruction: 0xb604\n+\t\t\t@ instruction: 0xb60c\n \tmovs\tr2, r0\n-\tbeq.n\t3cf670 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd0d8>\n+\tbeq.n\t3cf680 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd0e8>\n \tmovs\tr1, r1\n-\tldmia\tr7, {r1, r2, r3, r7}\n+\tldmia\tr7, {r1, r2, r4, r7}\n \tmovs\tr1, r1\n \tldr\tr0, [r5, #0]\n \tmovs\tr1, r0\n-\tldr\tr4, [sp, #352]\t@ 0x160\n+\tldr\tr4, [sp, #384]\t@ 0x180\n \tmovs\tr2, r0\n-\tldr\tr4, [sp, #440]\t@ 0x1b8\n+\tldr\tr4, [sp, #472]\t@ 0x1d8\n \tmovs\tr2, r0\n tag_t::extractGenBankKeyValueFromComment(std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator > const&, std::__cxx11::basic_string, std::allocator >&):\n ./src/io/exp.C:100\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r2\n \tldr\tr6, [pc, #440]\t@ (3cf7d4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd23c>)\n \tldr\tr3, [pc, #440]\t@ (3cf7d8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd240>)\n@@ -1999609,27 +1999609,27 @@\n \tnop\n \tbls.n\t3cf858 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd2c0>\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tbls.n\t3cf820 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd288>\n \tmovs\tr5, r1\n-\tldmia\tr6, {r2, r3, r4, r5, r6}\n+\tldmia\tr6!, {r2, r7}\n \tmovs\tr1, r1\n-\tpush\t{r2, r5}\n+\tpush\t{r2, r3, r5}\n \tmovs\tr2, r0\n-\tldmia\tr6, {r1, r2, r4, r6}\n+\tldmia\tr6, {r1, r2, r3, r4, r6}\n \tmovs\tr1, r1\n-\tldmia\tr5, {r1, r3, r5, r7}\n+\tldmia\tr5, {r1, r4, r5, r7}\n \tmovs\tr1, r1\n \tstr\tr2, [r0, #100]\t@ 0x64\n \tmovs\tr1, r0\n-\tldr\tr2, [sp, #456]\t@ 0x1c8\n+\tldr\tr2, [sp, #488]\t@ 0x1e8\n \tmovs\tr2, r0\n-\tldr\tr2, [sp, #544]\t@ 0x220\n+\tldr\tr2, [sp, #576]\t@ 0x240\n \tmovs\tr2, r0\n EXP::EXP():\n ./src/io/exp.C:155\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n \tldr.w\tr2, [pc, #1204]\t@ 3cfcb8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xd720>\n \tmov\tr4, r0\n@@ -2002766,87 +2002766,87 @@\n \tmov\tr1, r0\n \tb.n\t3d08d6 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xe33e>\n \tnop\n \tldmia\tr5!, {r2, r6}\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstmia\tr2!, {r1, r3, r4, r6, r7}\n+\tstmia\tr2!, {r1, r5, r6, r7}\n \tmovs\tr1, r1\n-\tstmia\tr2!, {r5, r7}\n+\tstmia\tr2!, {r3, r5, r7}\n \tmovs\tr1, r1\n-\tstmia\tr2!, {r4, r5, r6}\n+\tstmia\tr2!, {r3, r4, r5, r6}\n \tmovs\tr1, r1\n-\tstmia\tr2!, {r1, r3, r4, r5}\n+\tstmia\tr2!, {r1, r6}\n \tmovs\tr1, r1\n-\tstmia\tr2!, {r1, r3}\n+\tstmia\tr2!, {r1, r4}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {r1, r3, r4, r6, r7}\n+\tstmia\tr1!, {r1, r5, r6, r7}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {r2, r5, r7}\n+\tstmia\tr1!, {r2, r3, r5, r7}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {r2, r4, r5, r6}\n+\tstmia\tr1!, {r2, r3, r4, r5, r6}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {r1, r2, r3, r4, r5}\n+\tstmia\tr1!, {r1, r2, r6}\n \tmovs\tr1, r1\n-\tstmia\tr1!, {r1, r2, r3}\n+\tstmia\tr1!, {r1, r2, r4}\n \tmovs\tr1, r1\n-\tstmia\tr0!, {r1, r2, r3, r4, r6, r7}\n+\tstmia\tr0!, {r1, r2, r5, r6, r7}\n \tmovs\tr1, r1\n-\tstmia\tr0!, {r3, r5, r7}\n+\tstmia\tr0!, {r4, r5, r7}\n \tmovs\tr1, r1\n-\tstmia\tr0!, {r3, r4, r5, r6}\n+\tstmia\tr0!, {r7}\n \tmovs\tr1, r1\n-\tstmia\tr0!, {r1, r6}\n+\tstmia\tr0!, {r1, r3, r6}\n \tmovs\tr1, r1\n-\tstmia\tr0!, {r1, r4}\n+\tstmia\tr0!, {r1, r3, r4}\n \tmovs\tr1, r1\n-\tittt\tal\n+\titet\tal\n \tmoval\tr1, r1\n-\tite\tge\t@ unpredictable \n-\tmovge\tr1, r1\n-\titt\tvc\t@ unpredictable \n-\tmovvc\tr1, r1\n-\titte\tmi\t@ unpredictable \n+\tite\tlt\t@ unpredictable >\n+\tmovlt\tr1, r1\n+\titt\thi\t@ unpredictable \n+\tmovhi\tr1, r1\n+\titee\tmi\t@ unpredictable \n \tmovmi\tr1, r1\n-\titet\tne\t@ unpredictable \n+\tittt\tne\t@ unpredictable \n \tmovne\tr1, r1\n-\tbkpt\t0x00e6\n+\tbkpt\t0x00ee\n \tmovne\tr1, r1\n-\tbkpt\t0x00b0\n+\tbkpt\t0x00b8\n \tmovs\tr1, r1\n-\tbkpt\t0x0080\n+\tbkpt\t0x0088\n \tmovs\tr1, r1\n-\tbkpt\t0x004a\n+\tbkpt\t0x0052\n \tmovs\tr1, r1\n-\tbkpt\t0x001a\n+\tbkpt\t0x0022\n \tmovs\tr1, r1\n-\tpop\t{r1, r3, r5, r6, r7, pc}\n+\tpop\t{r1, r4, r5, r6, r7, pc}\n \tmovs\tr1, r1\n-\tpop\t{r2, r4, r5, r7, pc}\n+\tpop\t{r2, r3, r4, r5, r7, pc}\n \tmovs\tr1, r1\n-\tpop\t{r2, r7, pc}\n+\tpop\t{r2, r3, r7, pc}\n \tmovs\tr1, r1\n-\tpop\t{r1, r2, r3, r6, pc}\n+\tpop\t{r1, r2, r4, r6, pc}\n \tmovs\tr1, r1\n-\tpop\t{r1, r2, r3, r4, pc}\n+\tpop\t{r1, r2, r5, pc}\n \tmovs\tr1, r1\n-\tpop\t{r1, r2, r3, r5, r6, r7}\n+\tpop\t{r1, r2, r4, r5, r6, r7}\n \tmovs\tr1, r1\n-\tpop\t{r3, r4, r5, r7}\n+\tpop\t{r6, r7}\n \tmovs\tr1, r1\n-\tpop\t{r3, r7}\n+\tpop\t{r4, r7}\n \tmovs\tr1, r1\n-\tpop\t{r1, r4, r6}\n+\tpop\t{r1, r3, r4, r6}\n \tmovs\tr1, r1\n-\tpop\t{r1, r5}\n+\tpop\t{r1, r3, r5}\n \tmovs\tr1, r1\n-\tcbnz\tr2, 3d107c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xeae4>\n+\tcbnz\tr2, 3d107e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xeae6>\n \tmovs\tr1, r1\n-\tcbnz\tr4, 3d1072 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xeada>\n+\tcbnz\tr4, 3d1074 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xeadc>\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n /usr/include/c++/10/bits/locale_facets.h:876\n \tmov\tr0, r7\n \tblx\tb51c ::_M_widen_init() const@plt>\n /usr/include/c++/10/bits/locale_facets.h:877\n@@ -2003332,21 +2003332,21 @@\n \tmovs\tr0, r0\n \tpop\t{r5, r6, r7}\n \tmovs\tr5, r1\n \tpop\t{r2, r7}\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tpush\t{r4, r6}\n+\tpush\t{r3, r4, r6}\n \tmovs\tr1, r1\n-\tldmia\tr2, {r1, r2, r6, r7}\n+\tldmia\tr2, {r1, r2, r3, r6, r7}\n \tmovs\tr2, r0\n-\tpush\t{r3, r5}\n+\tpush\t{r4, r5}\n \tmovs\tr1, r1\n-\tpush\t{r1, r3}\n+\tpush\t{r1, r4}\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n EXP::getSequence(FlexLexer*, char const*):\n ./src/io/exp.C:280\n@@ -2003912,27 +2003912,27 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tuxth\tr6, r0\n+\tuxth\tr6, r1\n \tmovs\tr1, r1\n-\tsxth\tr6, r2\n+\tsxth\tr6, r3\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tsub\tsp, #400\t@ 0x190\n+\tsub\tsp, #432\t@ 0x1b0\n \tmovs\tr1, r1\n-\tsub\tsp, #216\t@ 0xd8\n+\tsub\tsp, #248\t@ 0xf8\n \tmovs\tr1, r1\n \t\t\t@ instruction: 0xb832\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n EXP::load(char const*, bool):\n ./src/io/exp.C:312\n@@ -2004343,17 +2004343,17 @@\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #24\n \tmovs\tr0, r0\n \tlsrs\tr4, r7, #5\n \tmovs\tr0, r0\n-\tadd\tr6, sp, #864\t@ 0x360\n+\tadd\tr6, sp, #896\t@ 0x380\n \tmovs\tr1, r1\n-\tadd\tr6, sp, #920\t@ 0x398\n+\tadd\tr6, sp, #952\t@ 0x3b8\n \tmovs\tr1, r1\n ./src/io/exp.C:566\n \tcmp.w\tr5, #1008\t@ 0x3f0\n \tbne.w\t3d2920 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10388>\n /usr/include/stdlib.h:363\n \tmovs\tr1, #0\n \tldr\tr0, [r4, #4]\n@@ -2006800,57 +2006800,57 @@\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadd\tr6, pc, #64\t@ (adr r6, 3d2e74 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x108dc>)\n+\tadd\tr6, pc, #96\t@ (adr r6, 3d2e94 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x108fc>)\n \tmovs\tr1, r1\n-\tadd\tr3, pc, #640\t@ (adr r3, 3d30b8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10b20>)\n+\tadd\tr3, pc, #672\t@ (adr r3, 3d30d8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10b40>)\n \tmovs\tr1, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #904\t@ (adr r0, 3d31d0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10c38>)\n+\tadd\tr0, pc, #936\t@ (adr r0, 3d31f0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10c58>)\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #688\t@ (adr r0, 3d3100 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10b68>)\n+\tadd\tr0, pc, #720\t@ (adr r0, 3d3120 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10b88>)\n \tmovs\tr1, r1\n-\tadd\tr0, pc, #624\t@ (adr r0, 3d30c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10b2c>)\n+\tadd\tr0, pc, #656\t@ (adr r0, 3d30e4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10b4c>)\n \tmovs\tr1, r1\n-\tsubs\tr3, #14\n+\tsubs\tr3, #22\n \tmovs\tr4, r0\n-\tldr\tr7, [sp, #840]\t@ 0x348\n+\tldr\tr7, [sp, #872]\t@ 0x368\n \tmovs\tr1, r1\n-\tldr\tr5, [sp, #496]\t@ 0x1f0\n+\tldr\tr5, [sp, #528]\t@ 0x210\n \tmovs\tr1, r1\n-\tldr\tr6, [sp, #928]\t@ 0x3a0\n+\tldr\tr6, [sp, #960]\t@ 0x3c0\n \tmovs\tr1, r1\n-\tldr\tr6, [sp, #864]\t@ 0x360\n+\tldr\tr6, [sp, #896]\t@ 0x380\n \tmovs\tr1, r1\n-\tsubs\tr1, #76\t@ 0x4c\n+\tsubs\tr1, #84\t@ 0x54\n \tmovs\tr4, r0\n-\tldr\tr5, [sp, #952]\t@ 0x3b8\n+\tldr\tr5, [sp, #984]\t@ 0x3d8\n \tmovs\tr1, r1\n-\tldr\tr3, [sp, #760]\t@ 0x2f8\n+\tldr\tr3, [sp, #792]\t@ 0x318\n \tmovs\tr1, r1\n-\tldr\tr3, [sp, #440]\t@ 0x1b8\n+\tldr\tr3, [sp, #472]\t@ 0x1d8\n \tmovs\tr1, r1\n-\tldr\tr2, [sp, #672]\t@ 0x2a0\n+\tldr\tr2, [sp, #704]\t@ 0x2c0\n \tmovs\tr1, r1\n \tadds\tr0, #102\t@ 0x66\n \tmovs\tr1, r0\n-\tldr\tr2, [sp, #264]\t@ 0x108\n+\tldr\tr2, [sp, #296]\t@ 0x128\n \tmovs\tr1, r1\n-\tldr\tr2, [sp, #192]\t@ 0xc0\n+\tldr\tr2, [sp, #224]\t@ 0xe0\n \tmovs\tr1, r1\n ./src/io/exp.C:320\n \tldr\tr5, [sp, #28]\n \tmov\tr0, r5\n \tbl\t3d118c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xebf4>\n /usr/include/c++/10/ostream:611\n \tldr.w\tr1, [pc, #1656]\t@ 3d350c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10f74>\n@@ -2007712,63 +2007712,63 @@\n \tb.w\t3d223c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0xfca4>\n /usr/include/c++/10/bits/basic_string.h:186\n \tb.n\t3d33d2 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10e3a>\n \tb.n\t3d33dc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10e44>\n \tb.n\t3d33d2 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10e3a>\n \tb.n\t3d33dc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x10e44>\n \tnop\n-\tldr\tr1, [sp, #576]\t@ 0x240\n+\tldr\tr1, [sp, #608]\t@ 0x260\n \tmovs\tr1, r1\n-\tldr\tr1, [sp, #272]\t@ 0x110\n+\tldr\tr1, [sp, #304]\t@ 0x130\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldr\tr1, [sp, #936]\t@ 0x3a8\n+\tldr\tr1, [sp, #968]\t@ 0x3c8\n \tmovs\tr1, r1\n-\tldr\tr0, [sp, #824]\t@ 0x338\n+\tldr\tr0, [sp, #856]\t@ 0x358\n \tmovs\tr1, r1\n-\tldr\tr1, [sp, #360]\t@ 0x168\n+\tldr\tr1, [sp, #392]\t@ 0x188\n \tmovs\tr1, r1\n-\tldr\tr0, [sp, #344]\t@ 0x158\n+\tldr\tr0, [sp, #376]\t@ 0x178\n \tmovs\tr1, r1\n-\tldr\tr0, [sp, #592]\t@ 0x250\n+\tldr\tr0, [sp, #624]\t@ 0x270\n \tmovs\tr1, r1\n-\tstr\tr7, [sp, #912]\t@ 0x390\n+\tstr\tr7, [sp, #944]\t@ 0x3b0\n \tmovs\tr1, r1\n-\tldr\tr0, [sp, #336]\t@ 0x150\n+\tldr\tr0, [sp, #368]\t@ 0x170\n \tmovs\tr1, r1\n-\tstr\tr7, [sp, #448]\t@ 0x1c0\n+\tstr\tr7, [sp, #480]\t@ 0x1e0\n \tmovs\tr1, r1\n-\tldr\tr0, [sp, #448]\t@ 0x1c0\n+\tldr\tr0, [sp, #480]\t@ 0x1e0\n \tmovs\tr1, r1\n-\tstr\tr6, [sp, #992]\t@ 0x3e0\n+\tstr\tr7, [sp, #0]\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tstr\tr7, [sp, #808]\t@ 0x328\n+\tstr\tr7, [sp, #840]\t@ 0x348\n \tmovs\tr1, r1\n-\tstr\tr6, [sp, #464]\t@ 0x1d0\n+\tstr\tr6, [sp, #496]\t@ 0x1f0\n \tmovs\tr1, r1\n-\tstr\tr7, [sp, #240]\t@ 0xf0\n+\tstr\tr7, [sp, #272]\t@ 0x110\n \tmovs\tr1, r1\n-\tstr\tr6, [sp, #24]\n+\tstr\tr6, [sp, #56]\t@ 0x38\n \tmovs\tr1, r1\n-\tstr\tr7, [sp, #232]\t@ 0xe8\n+\tstr\tr7, [sp, #264]\t@ 0x108\n \tmovs\tr1, r1\n-\tstr\tr5, [sp, #592]\t@ 0x250\n+\tstr\tr5, [sp, #624]\t@ 0x270\n \tmovs\tr1, r1\n-\tstr\tr6, [sp, #928]\t@ 0x3a0\n+\tstr\tr6, [sp, #960]\t@ 0x3c0\n \tmovs\tr1, r1\n-\tstr\tr5, [sp, #168]\t@ 0xa8\n+\tstr\tr5, [sp, #200]\t@ 0xc8\n \tmovs\tr1, r1\n-\tstr\tr6, [sp, #600]\t@ 0x258\n+\tstr\tr6, [sp, #632]\t@ 0x278\n \tmovs\tr1, r1\n-\tstr\tr4, [sp, #736]\t@ 0x2e0\n+\tstr\tr4, [sp, #768]\t@ 0x300\n \tmovs\tr1, r1\n \tcmp\tr2, #120\t@ 0x78\n \tmovs\tr1, r0\n tag_t::~tag_t():\n /usr/include/c++/10/bits/basic_string.h:203\n \tadd.w\tr3, r0, #44\t@ 0x2c\n ./src/io/exp.H:56\n@@ -2008311,15 +2008311,15 @@\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstr\tr7, [sp, #400]\t@ 0x190\n \tmovs\tr5, r1\n \tmovs\tr4, #240\t@ 0xf0\n \tmovs\tr1, r0\n-\tadds\tr3, #8\n+\tadds\tr3, #20\n \tmovs\tr1, r0\n \tmovs\tr4, #220\t@ 0xdc\n \tmovs\tr1, r0\n GeneralIO::readKeyValue(std::istream&, std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >&):\n ./src/io/generalio.C:47\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r2\n@@ -2010075,17 +2010075,17 @@\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr4, [r4, #38]\t@ 0x26\n \tmovs\tr5, r1\n \tldrh\tr4, [r2, #38]\t@ 0x26\n \tmovs\tr5, r1\n-\tadds\tr5, #36\t@ 0x24\n+\tadds\tr5, #44\t@ 0x2c\n \tmovs\tr3, r0\n-\torrs\tr4, r3\n+\torrs\tr4, r4\n \tmovs\tr2, r0\n \tldrh\tr2, [r7, #32]\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n FASTA::dumpQuality(std::ostream&):\n ./src/io/fasta.C:630\n@@ -2010230,20 +2010230,20 @@\n \tb.n\t3d4464 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x11ecc>\n std::ctype const& std::__check_facet >(std::ctype const*):\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n \tldrh\tr6, [r3, #28]\n \tmovs\tr5, r1\n-\tadds\tr3, #252\t@ 0xfc\n+\tadds\tr4, #4\n \tmovs\tr3, r0\n-\tstr.w\tr0, [sl, r4]\n-\trors\tr0, r1\n+\tldr.w\tr0, [r2, r4]\n+\trors\tr0, r2\n \tmovs\tr2, r0\n-\tstrb.w\tr0, [r0, r4]\n+\tstrb.w\tr0, [r8, r4]\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream():\n /usr/include/c++/10/sstream:583\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n std::basic_ios >::basic_ios():\n /usr/include/c++/10/bits/basic_ios.h:462\n@@ -2010677,37 +2010677,37 @@\n \tb.n\t3d472e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x12196>\n \tldrh\tr4, [r1, #14]\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldrh\tr0, [r0, #14]\n \tmovs\tr5, r1\n-\tstrh\tr4, [r7, #36]\t@ 0x24\n+\tstrh\tr4, [r0, #38]\t@ 0x26\n \tmovs\tr1, r1\n-\tstrh\tr6, [r0, #38]\t@ 0x26\n+\tstrh\tr6, [r1, #38]\t@ 0x26\n \tmovs\tr1, r1\n-\tstrh\tr4, [r1, #38]\t@ 0x26\n+\tstrh\tr4, [r2, #38]\t@ 0x26\n \tmovs\tr1, r1\n-\tstrh\tr2, [r6, #36]\t@ 0x24\n+\tstrh\tr2, [r7, #36]\t@ 0x24\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tldrh\tr6, [r0, #8]\n \tmovs\tr5, r1\n-\tstr\tr5, [sp, #16]\n+\tstr\tr5, [sp, #64]\t@ 0x40\n \tmovs\tr1, r0\n-\tldr\tr1, [pc, #520]\t@ (3d4974 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x123dc>)\n+\tldr\tr1, [pc, #552]\t@ (3d4994 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x123fc>)\n \tmovs\tr2, r0\n-\tstrh\tr2, [r0, #34]\t@ 0x22\n+\tstrh\tr2, [r1, #34]\t@ 0x22\n \tmovs\tr1, r1\n-\tstrh\tr0, [r1, #34]\t@ 0x22\n+\tstrh\tr0, [r2, #34]\t@ 0x22\n \tmovs\tr1, r1\n-\tstrh\tr6, [r3, #30]\n+\tstrh\tr6, [r4, #30]\n \tmovs\tr1, r1\n FASTA::adjustNameNCBIHack(std::__cxx11::basic_string, std::allocator >&, std::__cxx11::basic_string, std::allocator >*):\n ./src/io/fasta.C:103\n \tldr.w\tr0, [pc, #2836]\t@ 3d5290 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x12cf8>\n \tldr.w\tr3, [pc, #2836]\t@ 3d5294 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x12cfc>\n \tadd\tr0, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n@@ -2012787,15 +2012787,15 @@\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xf13a000f\n \tstrh\tr4, [r7, #60]\t@ 0x3c\n \tmovs\tr5, r1\n \t\t\t@ instruction: 0xf0fc000f\n-\tstrh\tr6, [r3, #20]\n+\tstrh\tr6, [r4, #20]\n \tmovs\tr1, r1\n \tstrh\tr4, [r7, #52]\t@ 0x34\n \tmovs\tr5, r1\n \tlsrs\tr4, r3, #16\n \tmovs\tr0, r0\n \tstr\tr7, [sp, #48]\t@ 0x30\n \tmovs\tr5, r1\n@@ -2013224,17 +2013224,17 @@\n \tb.n\t3d5506 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x12f6e>\n \tldrb\tr0, [r6, #17]\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tb.n\t3d5068 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x12ad0>\n \tmovs\tr7, r1\n-\tsubs\tr6, #198\t@ 0xc6\n+\tsubs\tr6, #206\t@ 0xce\n \tmovs\tr2, r0\n-\tsubs\tr6, #220\t@ 0xdc\n+\tsubs\tr6, #228\t@ 0xe4\n \tmovs\tr2, r0\n \tlsrs\tr0, r0, #10\n \tmovs\tr1, r0\n FASTA::loadNextSeq(std::basic_ifstream >&):\n ./src/io/fasta.C:175\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n@@ -2014735,68 +2014735,68 @@\n \tmovs\tr0, r0\n \tldrb\tr4, [r2, #7]\n \tmovs\tr5, r1\n \tstrb\tr6, [r7, #27]\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tstrb\tr4, [r0, #13]\n+\tstrb\tr4, [r1, #13]\n \tmovs\tr1, r1\n-\tldrb\tr6, [r6, #3]\n+\tldrb\tr6, [r7, #3]\n \tmovs\tr2, r0\n-\tstrb\tr4, [r3, #13]\n+\tstrb\tr4, [r4, #13]\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tstrb\tr4, [r5, #11]\n+\tstrb\tr4, [r6, #11]\n \tmovs\tr1, r1\n-\tstrb\tr2, [r6, #11]\n+\tstrb\tr2, [r7, #11]\n \tmovs\tr1, r1\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstrb\tr6, [r2, #9]\n+\tstrb\tr6, [r3, #9]\n \tmovs\tr1, r1\n-\t\t\t@ instruction: 0xfbdc0003\n-\tstrb\tr4, [r7, #8]\n+\tumlal\tr0, r0, r4, r3\n+\tstrb\tr4, [r0, #9]\n \tmovs\tr1, r1\n-\tstrb\tr6, [r2, #2]\n+\tstrb\tr6, [r3, #2]\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstrb\tr2, [r3, #5]\n+\tstrb\tr2, [r4, #5]\n \tmovs\tr1, r1\n-\tldr\tr4, [r4, #124]\t@ 0x7c\n+\tldr\tr4, [r5, #124]\t@ 0x7c\n \tmovs\tr1, r1\n-\tstrb\tr4, [r6, #23]\n+\tstrb\tr4, [r7, #23]\n \tmovs\tr2, r0\n-\tldr\tr4, [r3, #124]\t@ 0x7c\n+\tldr\tr4, [r4, #124]\t@ 0x7c\n \tmovs\tr1, r1\n-\tldr\tr4, [r3, #112]\t@ 0x70\n+\tldr\tr4, [r4, #112]\t@ 0x70\n \tmovs\tr1, r1\n-\tldr\tr4, [r5, #104]\t@ 0x68\n+\tldr\tr4, [r6, #104]\t@ 0x68\n \tmovs\tr1, r1\n-\tldr\tr4, [r4, #104]\t@ 0x68\n+\tldr\tr4, [r5, #104]\t@ 0x68\n \tmovs\tr1, r1\n-\tldr\tr6, [r3, #104]\t@ 0x68\n+\tldr\tr6, [r4, #104]\t@ 0x68\n \tmovs\tr1, r1\n-\tstrb\tr0, [r6, #18]\n+\tstrb\tr0, [r7, #18]\n \tmovs\tr2, r0\n-\tldr\tr0, [r5, #100]\t@ 0x64\n+\tldr\tr0, [r6, #100]\t@ 0x64\n \tmovs\tr1, r1\n-\tldr\tr6, [r6, #88]\t@ 0x58\n+\tldr\tr6, [r7, #88]\t@ 0x58\n \tmovs\tr1, r1\n std::__cxx11::basic_ostringstream, std::allocator >::basic_ostringstream():\n /usr/include/c++/10/sstream:584\n \tmov\tr0, r8\n \tbl\t15970 , std::allocator >::~basic_stringbuf()@@Base>\n std::basic_ostream >::~basic_ostream():\n /usr/include/c++/10/ostream:93\n@@ -2015369,24 +2015369,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldr\tr6, [r6, #104]\t@ 0x68\n \tmovs\tr5, r1\n-\t\t\t@ instruction: 0xfa6c0003\n-\tldr\tr4, [r5, #68]\t@ 0x44\n+\t\t\t@ instruction: 0xfa740003\n+\tldr\tr4, [r6, #68]\t@ 0x44\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrh\tr4, [r3, #40]\t@ 0x28\n+\tldrh\tr0, [r5, #40]\t@ 0x28\n \tmovs\tr1, r0\n-\tldr\tr4, [r0, #64]\t@ 0x40\n+\tldr\tr4, [r1, #64]\t@ 0x40\n \tmovs\tr1, r1\n FASTA::loadNextINTSeq(std::basic_ifstream >&, int):\n ./src/io/fasta.C:366\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr6, r1\n \tldr.w\tr4, [pc, #2140]\t@ 3d6ab0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14518>\n \tldr.w\tr3, [pc, #2140]\t@ 3d6ab4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1451c>\n@@ -2016866,45 +2016866,45 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tstr\tr2, [r1, #72]\t@ 0x48\n+\tstr\tr2, [r2, #72]\t@ 0x48\n \tmovs\tr1, r1\n-\tldr\tr2, [r3, #40]\t@ 0x28\n+\tldr\tr2, [r4, #40]\t@ 0x28\n \tmovs\tr2, r0\n-\tstr\tr0, [r4, #112]\t@ 0x70\n+\tstr\tr0, [r5, #112]\t@ 0x70\n \tmovs\tr1, r1\n-\tstr\tr2, [r0, #100]\t@ 0x64\n+\tstr\tr2, [r1, #100]\t@ 0x64\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tstr\tr6, [r5, #96]\t@ 0x60\n+\tstr\tr6, [r6, #96]\t@ 0x60\n \tmovs\tr1, r1\n-\tstr\tr0, [r5, #96]\t@ 0x60\n+\tstr\tr0, [r6, #96]\t@ 0x60\n \tmovs\tr1, r1\n-\tstr\tr0, [r3, #96]\t@ 0x60\n+\tstr\tr0, [r4, #96]\t@ 0x60\n \tmovs\tr1, r1\n-\tstr\tr2, [r2, #96]\t@ 0x60\n+\tstr\tr2, [r3, #96]\t@ 0x60\n \tmovs\tr1, r1\n-\tstr\tr0, [r2, #96]\t@ 0x60\n+\tstr\tr0, [r3, #96]\t@ 0x60\n \tmovs\tr1, r1\n-\tstr\tr6, [r4, #76]\t@ 0x4c\n+\tstr\tr6, [r5, #76]\t@ 0x4c\n \tmovs\tr1, r1\n-\tstr\tr4, [r6, #24]\n+\tstr\tr4, [r7, #24]\n \tmovs\tr1, r1\n-\tstr\tr4, [r0, #124]\t@ 0x7c\n+\tstr\tr4, [r1, #124]\t@ 0x7c\n \tmovs\tr2, r0\n-\tstr\tr2, [r0, #64]\t@ 0x40\n+\tstr\tr2, [r1, #64]\t@ 0x40\n \tmovs\tr1, r1\n-\tstr\tr6, [r6, #52]\t@ 0x34\n+\tstr\tr6, [r7, #52]\t@ 0x34\n \tmovs\tr1, r1\n ./src/io/fasta.C:414\n \tadd\tr5, sp, #88\t@ 0x58\n \tmov\tr0, r5\n \tbl\t3d44b0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x11f18>\n std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*):\n /usr/include/c++/10/ostream:611\n@@ -2017160,17 +2017160,17 @@\n FASTA::loadNextINTSeq(std::basic_ifstream >&, int):\n ./src/io/fasta.C:429 (discriminator 25)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t3d6bea , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14652>\n \tb.n\t3d6c9c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14704>\n \tnop\n-\tstr\tr6, [r0, #40]\t@ 0x28\n+\tstr\tr6, [r1, #40]\t@ 0x28\n \tmovs\tr1, r1\n-\tstr\tr2, [r1, #40]\t@ 0x28\n+\tstr\tr2, [r2, #40]\t@ 0x28\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n FASTA::loadINT(char const*, int):\n ./src/io/fasta.C:340\n@@ -2017604,24 +2017604,24 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tstr\tr2, [r4, #20]\n \tmovs\tr5, r1\n-\tldc\t0, cr0, [r8, #-12]\n-\tstr\tr4, [r3, #8]\n+\tstc\t0, cr0, [r0, #-12]!\n+\tstr\tr4, [r4, #8]\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tldrb\tr0, [r1, #31]\n+\tldrb\tr4, [r2, #31]\n \tmovs\tr1, r0\n-\tstr\tr4, [r6, #0]\n+\tstr\tr4, [r7, #0]\n \tmovs\tr1, r1\n FASTA::loadQual(char const*):\n ./src/io/fasta.C:336\n \tmovs\tr2, #255\t@ 0xff\n \tb.w\t3d6cb8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14720>\n \tnop\n FASTA::loadNext(std::basic_ifstream >&, std::basic_ifstream >&):\n@@ -2018520,33 +2018520,33 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tldrb\tr4, [r0, r2]\n \tmovs\tr5, r1\n-\tldrb\tr0, [r0, #13]\n+\tldrb\tr4, [r1, #13]\n \tmovs\tr1, r0\n-\tldrh\tr6, [r2, r7]\n+\tldrh\tr6, [r3, r7]\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t3d756c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14fd4>\n+\tb.n\t3d757c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14fe4>\n \tmovs\tr3, r0\n-\tldrh\tr2, [r4, r5]\n+\tldrh\tr2, [r5, r5]\n \tmovs\tr1, r1\n-\tldrb\tr6, [r3, #9]\n+\tldrb\tr2, [r5, #9]\n \tmovs\tr1, r0\n-\tldrh\tr6, [r6, r3]\n+\tldrh\tr6, [r7, r3]\n \tmovs\tr1, r1\n-\tb.n\t3d73c0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14e28>\n+\tb.n\t3d73d0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x14e38>\n \tmovs\tr3, r0\n-\tldrh\tr2, [r0, r2]\n+\tldrh\tr2, [r1, r2]\n \tmovs\tr1, r1\n void std::vector, std::allocator > >::_M_realloc_insert >(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, std::fpos<__mbstate_t>&&):\n /usr/include/c++/10/bits/vector.tcc:426\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n std::vector, std::allocator > >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1758\n \tmvn.w\tr4, #4160749568\t@ 0xf8000000\n@@ -2018821,15 +2018821,15 @@\n /usr/include/c++/10/bits/stl_uninitialized.h:1013\n \tb.n\t3d76a2 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1510a>\n std::vector, std::allocator > >::_M_check_len(unsigned int, char const*) const:\n /usr/include/c++/10/bits/stl_vector.h:1759\n \tldr\tr0, [pc, #4]\t@ (3d77fc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x15264>)\n \tadd\tr0, pc\n \tblx\tb6dc \n-\tbic.w\tr0, lr, #8388608\t@ 0x800000\n+\tbics.w\tr0, sl, #8388608\t@ 0x800000\n std::basic_ostream >& std::endl >(std::basic_ostream >&):\n /usr/include/c++/10/ostream:682\n \tldr\tr3, [r0, #0]\n /usr/include/c++/10/ostream:681\n \tpush\t{r4, r5, r6, lr}\n \tldr\tr6, [pc, #68]\t@ (3d784c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x152b4>)\n \tldr.w\tr1, [r3, #-12]\n@@ -2021766,77 +2021766,77 @@\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tldr\tr4, [pc, #776]\t@ (3d8ee0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16948>)\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tldr\tr4, [pc, #808]\t@ (3d8f08 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16970>)\n+\tldr\tr4, [pc, #840]\t@ (3d8f28 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16990>)\n \tmovs\tr1, r1\n-\tldr\tr4, [pc, #504]\t@ (3d8ddc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16844>)\n+\tldr\tr4, [pc, #536]\t@ (3d8dfc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16864>)\n \tmovs\tr1, r1\n-\tldr\tr4, [pc, #288]\t@ (3d8d08 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16770>)\n+\tldr\tr4, [pc, #320]\t@ (3d8d28 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16790>)\n \tmovs\tr1, r1\n-\tldr\tr4, [pc, #64]\t@ (3d8c2c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16694>)\n+\tldr\tr4, [pc, #96]\t@ (3d8c4c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x166b4>)\n \tmovs\tr1, r1\n-\tldr\tr3, [pc, #896]\t@ (3d8f70 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x169d8>)\n+\tldr\tr3, [pc, #928]\t@ (3d8f90 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x169f8>)\n \tmovs\tr1, r1\n-\tldr\tr3, [pc, #704]\t@ (3d8eb4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1691c>)\n+\tldr\tr3, [pc, #736]\t@ (3d8ed4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1693c>)\n \tmovs\tr1, r1\n-\tldr\tr3, [pc, #496]\t@ (3d8de8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16850>)\n+\tldr\tr3, [pc, #528]\t@ (3d8e08 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16870>)\n \tmovs\tr1, r1\n-\tldr\tr3, [pc, #320]\t@ (3d8d3c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x167a4>)\n+\tldr\tr3, [pc, #352]\t@ (3d8d5c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x167c4>)\n \tmovs\tr1, r1\n-\tldr\tr3, [pc, #128]\t@ (3d8c80 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x166e8>)\n+\tldr\tr3, [pc, #160]\t@ (3d8ca0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16708>)\n \tmovs\tr1, r1\n-\tldr\tr2, [pc, #960]\t@ (3d8fc4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16a2c>)\n+\tldr\tr2, [pc, #992]\t@ (3d8fe4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16a4c>)\n \tmovs\tr1, r1\n-\tldr\tr1, [pc, #992]\t@ (3d8fe8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16a50>)\n+\tldr\tr2, [pc, #0]\t@ (3d8c08 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16670>)\n \tmovs\tr1, r1\n-\tldr\tr2, [pc, #256]\t@ (3d8d0c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16774>)\n+\tldr\tr2, [pc, #288]\t@ (3d8d2c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16794>)\n \tmovs\tr1, r1\n-\tldr\tr2, [pc, #72]\t@ (3d8c58 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x166c0>)\n+\tldr\tr2, [pc, #104]\t@ (3d8c78 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x166e0>)\n \tmovs\tr1, r1\n-\tldr\tr1, [pc, #912]\t@ (3d8fa4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16a0c>)\n+\tldr\tr1, [pc, #944]\t@ (3d8fc4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16a2c>)\n \tmovs\tr1, r1\n-\tldr\tr1, [pc, #744]\t@ (3d8f00 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16968>)\n+\tldr\tr1, [pc, #776]\t@ (3d8f20 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16988>)\n \tmovs\tr1, r1\n-\tldr\tr1, [pc, #608]\t@ (3d8e7c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x168e4>)\n+\tldr\tr1, [pc, #640]\t@ (3d8e9c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16904>)\n \tmovs\tr1, r1\n-\tldr\tr5, [sp, #104]\t@ 0x68\n+\tldr\tr5, [sp, #136]\t@ 0x88\n \tmovs\tr2, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tldr\tr0, [pc, #536]\t@ (3d8e40 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x168a8>)\n+\tldr\tr0, [pc, #568]\t@ (3d8e60 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x168c8>)\n \tmovs\tr1, r1\n-\tldr\tr0, [pc, #496]\t@ (3d8e1c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16884>)\n+\tldr\tr0, [pc, #528]\t@ (3d8e3c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x168a4>)\n \tmovs\tr1, r1\n \tlsrs\tr0, r7, #15\n \tmovs\tr0, r0\n-\tldr\tr0, [pc, #272]\t@ (3d8d44 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x167ac>)\n+\tldr\tr0, [pc, #304]\t@ (3d8d64 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x167cc>)\n \tmovs\tr1, r1\n-\tldr\tr0, [pc, #224]\t@ (3d8d18 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x16780>)\n+\tldr\tr0, [pc, #256]\t@ (3d8d38 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x167a0>)\n \tmovs\tr1, r1\n-\tldr\tr0, [pc, #120]\t@ (3d8cb4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1671c>)\n+\tldr\tr0, [pc, #152]\t@ (3d8cd4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1673c>)\n \tmovs\tr1, r1\n-\tblx\tpc\n+\tldr\tr0, [pc, #0]\t@ (3d8c40 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x166a8>)\n \tmovs\tr1, r1\n-\t\t\t@ instruction: 0x47ee\n+\t\t\t@ instruction: 0x47f6\n \tmovs\tr1, r1\n-\t\t\t@ instruction: 0x47b6\n+\t\t\t@ instruction: 0x47be\n \tmovs\tr1, r1\n-\tblxns\tr7\n+\tblxns\tr8\n \tmovs\tr1, r1\n-\tbx\tlr\n+\tbx\tpc\n \tmovs\tr1, r1\n \tcmp\tlr, lr\n \tmovs\tr5, r1\n-\tcmp\tlr, fp\n+\tcmp\tlr, ip\n \tmovs\tr1, r1\n-\tcmp\tr2, ip\n+\tcmp\tr2, sp\n \tmovs\tr1, r1\n SCF::dumpSample(unsigned short const*):\n ./src/io/scf.C:895\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr6, r0\n \tldr.w\tr8, [pc, #64]\t@ 3d8ca4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1670c>\n ./src/io/scf.C:899\n@@ -2021884,15 +2021884,15 @@\n ./src/io/scf.C:907\n \tldr\tr0, [r3, #0]\n \tb.w\tba8c \n \tcmn\tr6, r6\n \tmovs\tr5, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr0, r7\n+\tadd\tr0, r8\n \tmovs\tr1, r1\n \tlsrs\tr0, r7, #15\n \tmovs\tr0, r0\n SCF::recalcHeader():\n ./src/io/scf.C:1190\n \tldr\tr2, [r0, #36]\t@ 0x24\n ./src/io/scf.C:1189\n@@ -2022780,29 +2022780,29 @@\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tasrs\tr0, r5\n \tmovs\tr5, r1\n \tsubs\tr6, #80\t@ 0x50\n \tmovs\tr5, r1\n-\tands\tr2, r4\n+\tands\tr2, r5\n \tmovs\tr1, r1\n-\tsubs\tr7, #156\t@ 0x9c\n+\tsubs\tr7, #164\t@ 0xa4\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr7, #156\t@ 0x9c\n+\tsubs\tr7, #164\t@ 0xa4\n \tmovs\tr1, r1\n-\tsubs\tr7, #62\t@ 0x3e\n+\tsubs\tr7, #70\t@ 0x46\n \tmovs\tr1, r1\n-\tsubs\tr6, #234\t@ 0xea\n+\tsubs\tr6, #242\t@ 0xf2\n \tmovs\tr1, r1\n-\tsubs\tr6, #224\t@ 0xe0\n+\tsubs\tr6, #232\t@ 0xe8\n \tmovs\tr1, r1\n SCF::setBases(std::__cxx11::basic_string, std::allocator > const&, std::vector > const&, std::vector > const&):\n ./src/io/scf.C:1201\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r2\n \tldr.w\tr4, [pc, #2188]\t@ 3d9b64 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x175cc>\n \tsub\tsp, #260\t@ 0x104\n@@ -2024152,61 +2024152,61 @@\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tsubs\tr1, #4\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tsubs\tr3, #166\t@ 0xa6\n+\tsubs\tr3, #174\t@ 0xae\n \tmovs\tr1, r1\n-\tsubs\tr3, #152\t@ 0x98\n+\tsubs\tr3, #160\t@ 0xa0\n \tmovs\tr1, r1\n-\tadds\tr2, r4, r4\n+\tadds\tr6, r5, r4\n \tmovs\tr1, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tsubs\tr2, #140\t@ 0x8c\n+\tsubs\tr2, #148\t@ 0x94\n \tmovs\tr1, r1\n-\tsubs\tr1, #190\t@ 0xbe\n+\tsubs\tr1, #198\t@ 0xc6\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tsubs\tr1, #240\t@ 0xf0\n+\tsubs\tr1, #248\t@ 0xf8\n \tmovs\tr1, r1\n-\tsubs\tr1, #224\t@ 0xe0\n+\tsubs\tr1, #232\t@ 0xe8\n \tmovs\tr1, r1\n-\tsubs\tr1, #226\t@ 0xe2\n+\tsubs\tr1, #234\t@ 0xea\n \tmovs\tr1, r1\n-\tsubs\tr1, #226\t@ 0xe2\n+\tsubs\tr1, #234\t@ 0xea\n \tmovs\tr1, r1\n-\tsubs\tr1, #24\n+\tsubs\tr1, #32\n \tmovs\tr1, r1\n-\tsubs\tr0, #74\t@ 0x4a\n+\tsubs\tr0, #82\t@ 0x52\n \tmovs\tr1, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n+\tadds\tr7, #86\t@ 0x56\n+\tmovs\tr1, r1\n \tadds\tr7, #78\t@ 0x4e\n \tmovs\tr1, r1\n \tadds\tr7, #70\t@ 0x46\n \tmovs\tr1, r1\n-\tadds\tr7, #62\t@ 0x3e\n-\tmovs\tr1, r1\n-\tadds\tr7, #48\t@ 0x30\n+\tadds\tr7, #56\t@ 0x38\n \tmovs\tr1, r1\n-\tadds\tr7, #82\t@ 0x52\n+\tadds\tr7, #90\t@ 0x5a\n \tmovs\tr1, r1\n SCF::transposeAmbiguityCodes():\n ./src/io/scf.C:1374\n \tldr\tr2, [pc, #660]\t@ (3d9e70 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x178d8>)\n \tldr\tr3, [pc, #664]\t@ (3d9e74 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x178dc>)\n \tadd\tr2, pc\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n@@ -2024612,33 +2024612,33 @@\n \tmovs\tr0, r0\n \tadds\tr3, #120\t@ 0x78\n \tmovs\tr5, r1\n \tadds\tr2, #224\t@ 0xe0\n \tmovs\tr5, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tadds\tr6, #74\t@ 0x4a\n+\tadds\tr6, #82\t@ 0x52\n \tmovs\tr1, r1\n-\tadds\tr6, #30\n+\tadds\tr6, #38\t@ 0x26\n \tmovs\tr1, r1\n-\tasrs\tr2, r5, #14\n+\tasrs\tr6, r6, #14\n \tmovs\tr1, r0\n \tlsrs\tr0, r3, #25\n \tmovs\tr0, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr5, #88\t@ 0x58\n+\tadds\tr5, #96\t@ 0x60\n \tmovs\tr1, r1\n-\tadds\tr5, #60\t@ 0x3c\n+\tadds\tr5, #68\t@ 0x44\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n@@ -2024907,17 +2024907,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr3, #158\t@ 0x9e\n+\tadds\tr3, #166\t@ 0xa6\n \tmovs\tr1, r1\n-\tsubs\tr5, #250\t@ 0xfa\n+\tsubs\tr6, #2\n \tmovs\tr2, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getCalledBaseProb(unsigned int) const:\n ./src/io/scf.C:1447\n@@ -2025227,17 +2025227,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tadds\tr1, #112\t@ 0x70\n+\tadds\tr1, #120\t@ 0x78\n \tmovs\tr1, r1\n-\tsubs\tr3, #204\t@ 0xcc\n+\tsubs\tr3, #212\t@ 0xd4\n \tmovs\tr2, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getAProb(unsigned int) const:\n ./src/io/scf.C:1472\n@@ -2025503,17 +2025503,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr7, #186\t@ 0xba\n+\tcmp\tr7, #194\t@ 0xc2\n \tmovs\tr1, r1\n-\tcmp\tr7, #166\t@ 0xa6\n+\tcmp\tr7, #174\t@ 0xae\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getCProb(unsigned int) const:\n ./src/io/scf.C:1480\n@@ -2025779,17 +2025779,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr6, #2\n+\tcmp\tr6, #10\n \tmovs\tr1, r1\n-\tcmp\tr6, #22\n+\tcmp\tr6, #30\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getGProb(unsigned int) const:\n ./src/io/scf.C:1488\n@@ -2026055,17 +2026055,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr4, #74\t@ 0x4a\n+\tcmp\tr4, #82\t@ 0x52\n \tmovs\tr1, r1\n-\tcmp\tr4, #134\t@ 0x86\n+\tcmp\tr4, #142\t@ 0x8e\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getTProb(unsigned int) const:\n ./src/io/scf.C:1496\n@@ -2026331,17 +2026331,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr2, #146\t@ 0x92\n+\tcmp\tr2, #154\t@ 0x9a\n \tmovs\tr1, r1\n-\tcmp\tr2, #246\t@ 0xf6\n+\tcmp\tr2, #254\t@ 0xfe\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getASample(unsigned int) const:\n ./src/io/scf.C:1505\n@@ -2026609,17 +2026609,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tcmp\tr1, #144\t@ 0x90\n+\tcmp\tr1, #152\t@ 0x98\n \tmovs\tr1, r1\n-\tcmp\tr1, #132\t@ 0x84\n+\tcmp\tr1, #140\t@ 0x8c\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getCSample(unsigned int) const:\n ./src/io/scf.C:1513\n@@ -2026887,17 +2026887,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr7, #208\t@ 0xd0\n+\tmovs\tr7, #216\t@ 0xd8\n \tmovs\tr1, r1\n-\tmovs\tr7, #240\t@ 0xf0\n+\tmovs\tr7, #248\t@ 0xf8\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getGSample(unsigned int) const:\n ./src/io/scf.C:1521\n@@ -2027165,17 +2027165,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr6, #16\n+\tmovs\tr6, #24\n \tmovs\tr1, r1\n-\tmovs\tr6, #92\t@ 0x5c\n+\tmovs\tr6, #100\t@ 0x64\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getTSample(unsigned int) const:\n ./src/io/scf.C:1529\n@@ -2027443,17 +2027443,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr4, #80\t@ 0x50\n+\tmovs\tr4, #88\t@ 0x58\n \tmovs\tr1, r1\n-\tmovs\tr4, #200\t@ 0xc8\n+\tmovs\tr4, #208\t@ 0xd0\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::getPeakIndex(unsigned int) const:\n ./src/io/scf.C:1538\n@@ -2027721,17 +2027721,17 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tmovs\tr3, #96\t@ 0x60\n+\tmovs\tr3, #104\t@ 0x68\n \tmovs\tr1, r1\n-\tmovs\tr3, #80\t@ 0x50\n+\tmovs\tr3, #88\t@ 0x58\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n SCF::save(char const*):\n ./src/io/scf.C:915\n@@ -2032003,25 +2032003,25 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #8\n \tmovs\tr5, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tlsls\tr4, r4, #24\n+\tlsls\tr4, r5, #24\n \tmovs\tr1, r1\n-\tlsls\tr6, r2, #21\n+\tlsls\tr6, r3, #21\n \tmovs\tr1, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tlsls\tr6, r6, #21\n+\tlsls\tr6, r7, #21\n \tmovs\tr1, r1\n-\tlsls\tr0, r2, #19\n+\tlsls\tr0, r3, #19\n \tmovs\tr1, r1\n SCF::save(char const*):\n ./src/io/scf.C:978\n \tblx\tb0d4 \n \tmov\tr9, r0\n ./src/io/scf.C:979\n \tldr\tr0, [r4, #36]\t@ 0x24\n@@ -2033984,24 +2033984,24 @@\n \tblx\tb538 \n SCF::save(char const*):\n ./src/io/scf.C:919 (discriminator 11)\n \tmov\tr0, r5\n \tblx\tba9c <__cxa_free_exception@plt>\n \tb.n\t3ddf7a , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1b9e2>\n \tb.n\t3ddfa6 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1ba0e>\n-\t\t\t@ instruction: 0xf78c0008\n-\t\t\t@ instruction: 0xf70a0008\n+\t\t\t@ instruction: 0xf7940008\n+\t\t\t@ instruction: 0xf7120008\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\t\t\t@ instruction: 0xf6fe0008\n-\tsubw\tr0, r0, #2056\t@ 0x808\n-\tmovw\tr0, #51208\t@ 0xc808\n-\t\t\t@ instruction: 0xf6340008\n+\t\t\t@ instruction: 0xf7060008\n+\tsubw\tr0, r8, #2056\t@ 0x808\n+\t\t\t@ instruction: 0xf6540008\n+\t\t\t@ instruction: 0xf63c0008\n SCF::load(char const*, std::__cxx11::basic_string, std::allocator >&):\n ./src/io/scf.C:223\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r1\n \tldr.w\tr4, [pc, #3204]\t@ 3dec5c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1c6c4>\n \tvpush\t{d8-d9}\n \tsub.w\tsp, sp, #612\t@ 0x264\n@@ -2035724,26 +2035724,26 @@\n \tmovs\tr0, r0\n \tldrsb\tr4, [r3, r7]\n \tmovs\tr7, r1\n \tldrsb\tr6, [r0, r7]\n \tmovs\tr7, r1\n \tldrsb\tr2, [r0, r7]\n \tmovs\tr7, r1\n-\tbics.w\tr0, r6, #8912896\t@ 0x880000\n+\tbics.w\tr0, lr, #8912896\t@ 0x880000\n \tlsrs\tr4, r2, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tstc\t0, cr0, [sl], #48\t@ 0x30\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadds\tr7, #226\t@ 0xe2\n+\tadds\tr7, #238\t@ 0xee\n \tmovs\tr1, r0\n-\tmovw\tr0, #8\n \tmovw\tr0, #32776\t@ 0x8008\n+\t\t\t@ instruction: 0xf2500008\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n SCF::undelta16(unsigned short*):\n ./src/io/scf.C:743\n \tcmp\tr2, #0\n \tbeq.w\t3df3c0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1ce28>\n \tldrd\tlr, ip, [sl, #172]\t@ 0xac\n@@ -2038524,37 +2038524,37 @@\n /usr/include/c++/10/bits/basic_ios.h:158\n \torr.w\tr1, r6, #4\n \tblx\tbe44 >::clear(std::_Ios_Iostate)@plt+0x4>\n \tb.w\t3de478 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1bee0>\n \tnop\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tb.n\t3e01a0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1dc08>\n+\tb.n\t3e01b0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1dc18>\n \tmovs\tr0, r1\n-\tb.n\t3e01a8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1dc10>\n+\tb.n\t3e01b8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1dc20>\n \tmovs\tr0, r1\n-\tudf\t#200\t@ 0xc8\n+\tudf\t#208\t@ 0xd0\n \tmovs\tr0, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n-\tb.n\t3e0644 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e0ac>\n+\tb.n\t3e0654 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e0bc>\n \tmovs\tr0, r1\n-\tudf\t#58\t@ 0x3a\n+\tudf\t#66\t@ 0x42\n \tmovs\tr0, r1\n-\tpop\t{r2, r3, r5, r6, pc}\n+\tpop\t{r2, r4, r5, r6, pc}\n \tmovs\tr1, r0\n-\tbls.n\t3e00a4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1db0c>\n+\tbls.n\t3e00b4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1db1c>\n \tmovs\tr0, r1\n-\tldrh\tr6, [r2, #50]\t@ 0x32\n+\tldrh\tr6, [r3, #50]\t@ 0x32\n \tmovs\tr5, r0\n-\tudf\t#8\n+\tudf\t#16\n \tmovs\tr0, r1\n-\tble.n\t3e0118 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1db80>\n+\tudf\t#4\n \tmovs\tr0, r1\n SCF::load(char const*, std::__cxx11::basic_string, std::allocator >&):\n ./src/io/scf.C:454\n \tldr.w\tip, [sl, #36]\t@ 0x24\n \tldr.w\tr3, [sl, #168]\t@ 0xa8\n SCF::convert2ByteOrderToHost(unsigned short*, unsigned int):\n ./src/io/scf.C:700\n@@ -2041046,81 +2041046,81 @@\n \tb.n\t3e0f5e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e9c6>\n \tb.n\t3e0f4e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e9b6>\n \tb.n\t3e0f5e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e9c6>\n \tb.n\t3e0f4e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e9b6>\n \tb.n\t3e0f5e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1e9c6>\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tbne.n\t3e0fc8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1ea30>\n+\tbne.n\t3e0fd8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1ea40>\n \tmovs\tr0, r1\n-\tldmia\tr5, {r3, r5, r7}\n+\tldmia\tr5, {r4, r5, r7}\n \tmovs\tr0, r1\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n-\tldmia\tr5!, {r1, r2, r3, r6}\n+\tldmia\tr5!, {r1, r2, r4, r6}\n \tmovs\tr0, r1\n-\tldmia\tr5!, {r6}\n+\tldmia\tr5!, {r3, r6}\n \tmovs\tr0, r1\n-\tldmia\tr5, {r2, r3, r5}\n+\tldmia\tr5, {r2, r4, r5}\n \tmovs\tr0, r1\n-\tldmia\tr4, {r1, r3, r4, r6, r7}\n+\tldmia\tr4!, {r1, r5, r6, r7}\n \tmovs\tr0, r1\n \tstrb\tr2, [r5, r2]\n \tmovs\tr0, r0\n-\tldmia\tr5, {r1, r3, r5, r6}\n+\tldmia\tr5, {r1, r4, r5, r6}\n \tmovs\tr0, r1\n-\tldmia\tr4, {r1, r4, r6}\n+\tldmia\tr4, {r1, r3, r4, r6}\n \tmovs\tr0, r1\n-\tbeq.n\t3e10a0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1eb08>\n+\tbeq.n\t3e10b0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1eb18>\n \tmovs\tr0, r1\n-\tldmia\tr3!, {r1, r2, r4, r6, r7}\n+\tldmia\tr3, {r1, r2, r3, r4, r6, r7}\n \tmovs\tr0, r1\n-\tldmia\tr7!, {r1, r5}\n+\tldmia\tr7!, {r1, r3, r5}\n \tmovs\tr0, r1\n-\tldmia\tr3!, {r1, r6}\n+\tldmia\tr3, {r1, r3, r6}\n \tmovs\tr0, r1\n-\tldmia\tr3, {r1, r3, r4, r7}\n+\tldmia\tr3!, {r1, r5, r7}\n \tmovs\tr0, r1\n-\tldmia\tr2, {r1, r2, r6, r7}\n+\tldmia\tr2, {r1, r2, r3, r6, r7}\n \tmovs\tr0, r1\n-\tldmia\tr4, {r1, r3, r4, r7}\n+\tldmia\tr4!, {r1, r5, r7}\n \tmovs\tr0, r1\n-\tldmia\tr2, {r1, r2, r3, r6}\n+\tldmia\tr2, {r1, r2, r4, r6}\n \tmovs\tr0, r1\n-\tldmia\tr3, {r1, r3, r6, r7}\n+\tldmia\tr3!, {r1, r4, r6, r7}\n \tmovs\tr0, r1\n-\tldmia\tr1, {r1, r4, r6, r7}\n+\tldmia\tr1, {r1, r3, r4, r6, r7}\n \tmovs\tr0, r1\n-\tldrb\tr0, [r5, #26]\n+\tldrb\tr4, [r6, #26]\n \tmovs\tr0, r0\n-\tldmia\tr4, {r2, r4, r5, r7}\n+\tldmia\tr4, {r2, r3, r4, r5, r7}\n \tmovs\tr0, r1\n-\tldmia\tr1!, {r4, r6}\n+\tldmia\tr1!, {r3, r4, r6}\n \tmovs\tr0, r1\n-\tldmia\tr3!, {r1, r4, r7}\n+\tldmia\tr3, {r1, r3, r4, r7}\n \tmovs\tr0, r1\n-\tldmia\tr0!, {r5, r6, r7}\n+\tldmia\tr0!, {r3, r5, r6, r7}\n \tmovs\tr0, r1\n-\tldmia\tr3!, {r1, r4, r5, r6}\n+\tldmia\tr3, {r1, r3, r4, r5, r6}\n \tmovs\tr0, r1\n-\tldmia\tr0!, {r2, r3, r5, r6}\n+\tldmia\tr0!, {r2, r4, r5, r6}\n \tmovs\tr0, r1\n-\tldmia\tr3!, {r2, r5}\n+\tldmia\tr3, {r2, r3, r5}\n \tmovs\tr0, r1\n-\tstmia\tr7!, {r1, r3, r4, r5, r6, r7}\n+\tldmia\tr0!, {r1}\n \tmovs\tr0, r1\n-\tldmia\tr2, {r1, r2, r3, r6}\n+\tldmia\tr2, {r1, r2, r4, r6}\n \tmovs\tr0, r1\n-\tstmia\tr7!, {r2, r7}\n+\tstmia\tr7!, {r2, r3, r7}\n \tmovs\tr0, r1\n-\tldmia\tr2!, {r3, r4, r5, r7}\n+\tldmia\tr2!, {r6, r7}\n \tmovs\tr0, r1\n-\tstmia\tr7!, {r1, r3}\n+\tstmia\tr7!, {r1, r4}\n \tmovs\tr0, r1\n SCF::SCF():\n ./src/io/scf.C:47\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr1, r0\n \tldr\tr5, [pc, #824]\t@ (3e1424 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1ee8c>)\n \tmov\tr4, r0\n@@ -2041858,35 +2041858,35 @@\n \tmovs\tr7, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \t\t\t@ instruction: 0xb74a\n \tmovs\tr4, r1\n \tbkpt\t0x0012\n \tmovs\tr4, r1\n-\tldmia\tr1!, {r2, r3, r4, r7}\n+\tldmia\tr1!, {r2, r5, r7}\n \tmovs\tr0, r1\n \tmovs\tr7, #58\t@ 0x3a\n \tmovs\tr7, r1\n \tmovs\tr7, #40\t@ 0x28\n \tmovs\tr7, r1\n \tmovs\tr6, #244\t@ 0xf4\n \tmovs\tr7, r1\n-\tldmia\tr1!, {}\n+\tldmia\tr1!, {r3}\n \tmovs\tr0, r1\n \tmovs\tr6, #220\t@ 0xdc\n \tmovs\tr7, r1\n \tmovs\tr6, #162\t@ 0xa2\n \tmovs\tr7, r1\n \tmovs\tr6, #142\t@ 0x8e\n \tmovs\tr7, r1\n \tmovs\tr6, #96\t@ 0x60\n \tmovs\tr7, r1\n \tmovs\tr6, #76\t@ 0x4c\n \tmovs\tr7, r1\n-\tldmia\tr0!, {r4, r5, r6}\n+\tldmia\tr0!, {r3, r4, r5, r6}\n \tmovs\tr0, r1\n \tmovs\tr6, #22\n \tmovs\tr7, r1\n \tmovs\tr5, #234\t@ 0xea\n \tmovs\tr7, r1\n \tmovs\tr5, #176\t@ 0xb0\n \tmovs\tr7, r1\n@@ -2042695,53 +2042695,53 @@\n /usr/include/c++/10/bits/stl_list.h:446\n \tb.n\t3e188c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1f2f4>\n \tnop\n \trev16\tr4, r3\n \tmovs\tr4, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tstmia\tr5!, {r1, r2, r3, r5, r6, r7}\n-\tmovs\tr0, r1\n-\tstmia\tr5!, {r2, r5, r6, r7}\n-\tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r3, r5, r6}\n+\tstmia\tr5!, {r1, r2, r4, r5, r6, r7}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r2, r5, r6}\n+\tstmia\tr5!, {r2, r3, r5, r6, r7}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r2, r5, r6}\n+\tstmia\tr5!, {r1, r4, r5, r6}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r3, r5, r6}\n+\tstmia\tr5!, {r1, r2, r3, r5, r6}\n \tmovs\tr0, r1\n \tstmia\tr5!, {r1, r2, r3, r5, r6}\n \tmovs\tr0, r1\n \tstmia\tr5!, {r1, r4, r5, r6}\n \tmovs\tr0, r1\n \tstmia\tr5!, {r1, r2, r4, r5, r6}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r4, r5, r6}\n+\tstmia\tr5!, {r1, r3, r4, r5, r6}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r4, r5, r6}\n+\tstmia\tr5!, {r1, r2, r3, r4, r5, r6}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r2, r3, r5, r6}\n+\tstmia\tr5!, {r1, r3, r4, r5, r6}\n+\tmovs\tr0, r1\n+\tstmia\tr5!, {r1, r3, r4, r5, r6}\n+\tmovs\tr0, r1\n+\tstmia\tr5!, {r1, r2, r4, r5, r6}\n+\tmovs\tr0, r1\n+\tstmia\tr5!, {r1, r4, r5, r6}\n \tmovs\tr0, r1\n \tstmia\tr5!, {r1, r3, r5, r6}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r5, r6}\n+\tstmia\tr5!, {r1, r2, r5, r6}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r2, r3, r4, r6}\n+\tstmia\tr5!, {r1, r3, r4, r6}\n+\tmovs\tr0, r1\n+\tstmia\tr5!, {r1, r2, r4, r6}\n \tmovs\tr0, r1\n \tstmia\tr5!, {r1, r4, r6}\n \tmovs\tr0, r1\n \tstmia\tr5!, {r1, r2, r3, r6}\n \tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r3, r6}\n-\tmovs\tr0, r1\n-\tstmia\tr5!, {r1, r2, r6}\n-\tmovs\tr0, r1\n-\tldr\tr2, [r2, #88]\t@ 0x58\n+\tldr\tr2, [r3, #88]\t@ 0x58\n \tmovs\tr3, r0\n \t\t\t@ instruction: 0xb782\n \tmovs\tr4, r1\n \tcmp\tlr, r5\n \tmovs\tr0, r0\n \tcmp\tsl, r4\n \tmovs\tr0, r0\n@@ -2042786,21 +2042786,21 @@\n \tblx\tbe10 \n \t\t\t@ instruction: 0xb60a\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tldmia\tr4!, {r2, r5, r7}\n+\tldmia\tr4!, {r2, r3, r5, r7}\n \tmovs\tr5, r0\n-\tstmia\tr2!, {r4, r5, r7}\n+\tstmia\tr2!, {r3, r4, r5, r7}\n \tmovs\tr0, r1\n-\tstrb\tr4, [r3, #4]\n+\tstrb\tr4, [r4, #4]\n \tmovs\tr5, r0\n-\tstmia\tr2!, {r4, r5, r7}\n+\tstmia\tr2!, {r3, r4, r5, r7}\n \tmovs\tr0, r1\n NCBIInfoXML::startElement(void*, char const*, char const**):\n ./src/io/ncbiinfoxml.C:141\n \tpush\t{r3, r4, r5, r6, r7, lr}\n \tmov\tr6, r0\n \tmov\tr2, r1\n ./src/io/ncbiinfoxml.C:148\n@@ -2042915,15 +2042915,15 @@\n \tstrd\tr7, r7, [r6, #40]\t@ 0x28\n /usr/include/c++/10/bits/stl_list.h:153\n \tstr\tr1, [r6, #48]\t@ 0x30\n NCBIInfoXML::startElement(void*, char const*, char const**):\n ./src/io/ncbiinfoxml.C:152\n \tpop\t{r3, r4, r5, r6, r7, pc}\n \tnop\n-\tstmia\tr1!, {r5, r6}\n+\tstmia\tr1!, {r3, r5, r6}\n \tmovs\tr0, r1\n NCBIInfoXML::NCBIInfoXML():\n ./src/io/ncbiinfoxml.C:45\n \tpush\t{r4, r5}\n std::__cxx11::basic_string, std::allocator >::_M_length(unsigned int):\n /usr/include/c++/10/bits/basic_string.h:183\n \tmovs\tr2, #0\n@@ -2044261,41 +2044261,41 @@\n \tmovs\tr0, r0\n \tlsrs\tr4, r3, #21\n \tmovs\tr0, r0\n \tsub\tsp, #416\t@ 0x1a0\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tbkpt\t0x0026\n+\tbkpt\t0x002e\n \tmovs\tr0, r1\n-\tmovs\tr2, #184\t@ 0xb8\n+\tmovs\tr2, #192\t@ 0xc0\n \tmovs\tr4, r0\n \tlsrs\tr0, r7, #12\n \tmovs\tr0, r0\n \tlsrs\tr4, r2, #32\n \tmovs\tr0, r0\n \tlsls\tr4, r3, #29\n \tmovs\tr0, r0\n-\tpop\t{r1, r2, r3, r4, r5, r6, r7}\n+\tpop\t{r1, r2, pc}\n \tmovs\tr0, r1\n-\tpop\t{r1, r2, r3, r4, r6}\n+\tpop\t{r1, r2, r5, r6}\n \tmovs\tr0, r1\n \tlsrs\tr0, r0, #18\n \tmovs\tr0, r0\n \tlsrs\tr4, r0, #28\n \tmovs\tr0, r0\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tpop\t{r2, r3}\n+\tpop\t{r2, r4}\n \tmovs\tr0, r1\n-\tcbnz\tr0, 3e234e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fdb6>\n+\tcbnz\tr0, 3e2350 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fdb8>\n \tmovs\tr0, r1\n-\tcbnz\tr6, 3e2334 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fd9c>\n+\tcbnz\tr6, 3e2336 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fd9e>\n \tmovs\tr0, r1\n-\tcbnz\tr2, 3e2334 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fd9c>\n+\tcbnz\tr2, 3e2336 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x1fd9e>\n \tmovs\tr0, r1\n EXPFlexLexer::yywrap():\n ./src/io/exp_flexer.cc:324\n \tmovs\tr0, #1\n \tbx\tlr\n EXPFlexLexer::yyrestart(std::istream*):\n ./src/io/exp_flexer.cc:1810\n@@ -2045026,17 +2045026,17 @@\n \tmov\tr0, r5\n \tldr\tr1, [pc, #12]\t@ (3e272c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20194>)\n \tldr\tr2, [r3, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n \tb.n\t3e263e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x200a6>\n \tnop\n-\tmovs\tr4, #46\t@ 0x2e\n+\tmovs\tr4, #54\t@ 0x36\n \tmovs\tr4, r0\n-\tmovs\tr4, #28\n+\tmovs\tr4, #36\t@ 0x24\n \tmovs\tr4, r0\n EXPFlexLexer::yy_switch_to_buffer(yy_buffer_state*):\n ./src/io/exp_flexer.cc:1821\n \tpush\t{r4, r5, r6, lr}\n \tmov\tr4, r0\n EXPFlexLexer::yyensure_buffer_stack():\n ./src/io/exp_flexer.cc:2032\n@@ -2045190,17 +2045190,17 @@\n \tldr\tr1, [pc, #16]\t@ (3e2824 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2028c>)\n \tldr\tr3, [r6, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr3\n ./src/io/exp_flexer.cc:2045\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3e27e8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20250>\n-\tmovs\tr3, #100\t@ 0x64\n+\tmovs\tr3, #108\t@ 0x6c\n \tmovs\tr4, r0\n-\tmovs\tr3, #82\t@ 0x52\n+\tmovs\tr3, #90\t@ 0x5a\n \tmovs\tr4, r0\n EXPFlexLexer::yy_create_buffer(std::istream*, int):\n ./src/io/exp_flexer.cc:1896\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n ./src/io/exp_flexer.cc:1897\n \tldr.w\tr8, [r0]\n \tldr\tr3, [pc, #268]\t@ (3e2940 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x203a8>)\n@@ -2045403,17 +2045403,17 @@\n ./src/io/exp_flexer.cc:1961\n \tldr\tr7, [r4, #4]\n EXPFlexLexer::yy_create_buffer(std::istream&, int):\n ./src/io/exp_flexer.cc:1961\n \tb.n\t3e285e , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x202c6>\n \tnop\n \tstc2l\t15, cr15, [pc, #1020]!\t@ 3e2d40 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x207a8>\n-\tmovs\tr2, #20\n+\tmovs\tr2, #28\n \tmovs\tr4, r0\n-\tmovs\tr2, #8\n+\tmovs\tr2, #16\n \tmovs\tr4, r0\n EXPFlexLexer::EXPFlexLexer(std::istream*, std::ostream*):\n ./src/io/exp_flexer.cc:1362\n \tldr\tr3, [pc, #296]\t@ (3e2a78 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x204e0>)\n ./src/io/exp_flexer.cc:1360\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n@@ -2046330,22 +2046330,22 @@\n \tldr.w\tr3, [r5, r1, lsl #2]\n \tadd.w\tr6, r5, r1, lsl #2\n \tstr\tr7, [r3, #16]\n ./src/io/exp_flexer.cc:1582\n \tcmp.w\tr8, #0\n \tbne.w\t3e2e00 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20868>\n \tb.n\t3e2e86 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x208ee>\n-\tsubs\tr0, r7, #5\n+\tsubs\tr0, r0, #6\n \tmovs\tr4, r0\n-\tsubs\tr4, r4, #1\n+\tsubs\tr4, r5, #1\n \tmovs\tr4, r0\n \tbl\t17104e , std::allocator > std::operator+, std::allocator >(char const*, std::__cxx11::basic_string, std::allocator > const&)@@Base+0xcceb6>\n-\tadds\tr0, r7, #0\n+\tadds\tr0, r0, #1\n \tmovs\tr4, r0\n-\tadds\tr2, r2, #0\n+\tadds\tr2, r3, #0\n \tmovs\tr4, r0\n EXPFlexLexer::yy_get_previous_state():\n ./src/io/exp_flexer.cc:1627\n \tldr.w\tr1, [r0, #340]\t@ 0x154\n \tldr.w\tr3, [r0, #348]\t@ 0x15c\n ./src/io/exp_flexer.cc:1622\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, lr}\n@@ -2046452,19 +2046452,19 @@\n \tcmp\tr6, r4\n ./src/io/exp_flexer.cc:1643\n \tldrsh.w\tr2, [r3, #2856]\t@ 0xb28\n ./src/io/exp_flexer.cc:1629\n \tbne.n\t3e3088 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20af0>\n \tb.n\t3e30fc , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20b64>\n \tnop\n-\tadd\tr4, sp, #728\t@ 0x2d8\n+\tadd\tr4, sp, #760\t@ 0x2f8\n \tmovs\tr0, r1\n-\tadd\tr4, sp, #720\t@ 0x2d0\n+\tadd\tr4, sp, #752\t@ 0x2f0\n \tmovs\tr0, r1\n-\tadd\tr4, sp, #712\t@ 0x2c8\n+\tadd\tr4, sp, #744\t@ 0x2e8\n \tmovs\tr0, r1\n EXPFlexLexer::yy_try_NUL_trans(int):\n ./src/io/exp_flexer.cc:1660\n \tldr\tr3, [pc, #96]\t@ (3e319c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20c04>)\n \tlsls\tr2, r1, #1\n \tadd\tr3, pc\n \tadd\tr3, r2\n@@ -2046506,19 +2046506,19 @@\n ./src/io/exp_flexer.cc:1674\n \tcmp.w\tr0, #258\t@ 0x102\n ./src/io/exp_flexer.cc:1675\n \tit\teq\n \tmoveq\tr0, #0\n \tbx\tlr\n \tnop\n-\tadd\tr3, sp, #1008\t@ 0x3f0\n+\tadd\tr4, sp, #16\n \tmovs\tr0, r1\n-\tadd\tr3, sp, #928\t@ 0x3a0\n+\tadd\tr3, sp, #960\t@ 0x3c0\n \tmovs\tr0, r1\n-\tadd\tr3, sp, #704\t@ 0x2c0\n+\tadd\tr3, sp, #736\t@ 0x2e0\n \tmovs\tr0, r1\n EXPFlexLexer::yyunput(int, char*):\n ./src/io/exp_flexer.cc:1679\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n ./src/io/exp_flexer.cc:1682\n \tldr.w\tr7, [r0, #324]\t@ 0x144\n@@ -2046600,15 +2046600,15 @@\n \tldrb.w\tr7, [r1, #-1]!\n \tstrb.w\tr7, [r4, #316]\t@ 0x13c\n ./src/io/exp_flexer.cc:1712\n \tstr.w\tr1, [r4, #324]\t@ 0x144\n ./src/io/exp_flexer.cc:1713\n \tldmia.w\tsp!, {r3, r4, r5, r6, r7, r8, r9, pc}\n \tnop\n-\tsubs\tr4, r5, r0\n+\tsubs\tr4, r6, r0\n \tmovs\tr4, r0\n EXPFlexLexer::yyinput():\n ./src/io/exp_flexer.cc:1717\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, lr}\n \tmov\tr4, r0\n \tldr\tr6, [pc, #212]\t@ (3e3324 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20d8c>)\n \tsub\tsp, #8\n@@ -2046720,15 +2046720,15 @@\n \tldr\tr0, [r4, #0]\n \tmov\tr1, r7\n \tldr\tr5, [r0, #28]\n \tmov\tr0, r4\n \tblx\tr5\n \tb.n\t3e3258 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20cc0>\n \tnop\n-\tbl\t47b326 , std::allocator >@@Base+0x732da>\n+\tbl\t47b326 , std::allocator >@@Base+0x732d2>\n EXPFlexLexer::yy_load_buffer_state():\n ./src/io/exp_flexer.cc:1852\n \tpush\t{r3, r4, r5, lr}\n \tmov\tr4, r0\n ./src/io/exp_flexer.cc:1855\n \tadds\tr0, #40\t@ 0x28\n ./src/io/exp_flexer.cc:1853\n@@ -2047110,17 +2047110,17 @@\n \tldr\tr1, [pc, #16]\t@ (3e356c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20fd4>)\n \tldr\tr2, [r6, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n ./src/io/exp_flexer.cc:2045\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3e3532 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x20f9a>\n-\tasrs\tr6, r3, #24\n+\tasrs\tr6, r4, #24\n \tmovs\tr4, r0\n-\tasrs\tr2, r1, #24\n+\tasrs\tr2, r2, #24\n \tmovs\tr4, r0\n EXPFlexLexer::yypop_buffer_state():\n ./src/io/exp_flexer.cc:2011\n \tldr.w\tr3, [r0, #348]\t@ 0x15c\n \tcmp\tr3, #0\n \tbeq.n\t3e35f0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21058>\n ./src/io/exp_flexer.cc:2011 (discriminator 1)\n@@ -2047283,17 +2047283,17 @@\n \tldr\tr1, [pc, #16]\t@ (3e3678 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x210e0>)\n \tldr\tr3, [r5, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr3\n ./src/io/exp_flexer.cc:2045\n \tldr.w\tr0, [r4, #348]\t@ 0x15c\n \tb.n\t3e3642 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x210aa>\n-\tasrs\tr0, r2, #20\n+\tasrs\tr0, r3, #20\n \tmovs\tr4, r0\n-\tasrs\tr6, r7, #19\n+\tasrs\tr6, r0, #20\n \tmovs\tr4, r0\n EXPFlexLexer::yylex():\n ./src/io/exp_flexer.cc:738\n \tldr.w\tr3, [r0, #328]\t@ 0x148\n ./src/io/exp_flexer.cc:733\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr5, r0\n@@ -2048787,22 +2048787,22 @@\n ./src/io/exp_flexer.ll:80\n \tmovs\tr7, #3\n \tmovs\tr0, #106\t@ 0x6a\n \tstr.w\tr7, [r5, #332]\t@ 0x14c\n \tb.w\t3e397a , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x213e2>\n \tldr\tr0, [sp, #848]\t@ 0x350\n \tmovs\tr4, r1\n-\tadd\tr6, pc, #576\t@ (adr r6, 3e4514 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21f7c>)\n+\tadd\tr6, pc, #608\t@ (adr r6, 3e4534 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21f9c>)\n \tmovs\tr0, r1\n-\tadd\tr6, pc, #568\t@ (adr r6, 3e4510 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21f78>)\n+\tadd\tr6, pc, #600\t@ (adr r6, 3e4530 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21f98>)\n \tmovs\tr0, r1\n \tmcrr\t15, 15, pc, r1, cr15\t@ \n-\tadd\tr6, pc, #384\t@ (adr r6, 3e4460 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21ec8>)\n+\tadd\tr6, pc, #416\t@ (adr r6, 3e4480 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21ee8>)\n \tmovs\tr0, r1\n-\tadd\tr5, pc, #880\t@ (adr r5, 3e4654 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x220bc>)\n+\tadd\tr5, pc, #912\t@ (adr r5, 3e4674 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x220dc>)\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n \tlsrs\tr4, r1, #25\n \tmovs\tr0, r0\n \tldc2\t0, cr0, [r2], #56\t@ 0x38\n \tb.n\t3e3c86 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x216ee>\n@@ -2048985,15 +2048985,15 @@\n \tldr\tr0, [r5, #0]\n \tldr\tr1, [pc, #12]\t@ (3e4470 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21ed8>)\n \tldr\tr3, [r0, #56]\t@ 0x38\n \tadd\tr1, pc\n \tmov\tr0, r5\n \tblx\tr3\n \tb.w\t3e391a , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x21382>\n-\tlsrs\tr2, r3, #1\n+\tlsrs\tr2, r4, #1\n \tmovs\tr4, r0\n EXPFlexLexer::yyrestart(std::istream&):\n ./src/io/exp_flexer.cc:1791\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr4, r0\n ./src/io/exp_flexer.cc:1793\n \tldr.w\tr3, [r0, #348]\t@ 0x15c\n@@ -2049257,15 +2049257,15 @@\n \tldr\tr2, [r3, #56]\t@ 0x38\n \tadd\tr1, pc\n \tblx\tr2\n ./src/io/exp_flexer.cc:2091\n \tldr\tr0, [r4, #28]\n \tb.n\t3e45e0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22048>\n \tnop\n-\tlsls\tr2, r3, #25\n+\tlsls\tr2, r4, #25\n \tmovs\tr4, r0\n EXPFlexLexer::yy_pop_state():\n ./src/io/exp_flexer.cc:2098\n \tldr\tr3, [r0, #20]\n ./src/io/exp_flexer.cc:2097\n \tpush\t{r4, lr}\n \tmov\tr4, r0\n@@ -2049286,15 +2049286,15 @@\n \tldr.w\tr2, [r0, r1, lsl #2]\n \tlsls\tr3, r2, #1\n \tadds\tr3, #1\n \tstr.w\tr3, [r4, #332]\t@ 0x14c\n ./src/io/exp_flexer.cc:2102\n \tpop\t{r4, pc}\n \tnop\n-\tlsls\tr0, r5, #25\n+\tlsls\tr0, r6, #25\n \tmovs\tr4, r0\n EXPFlexLexer::yy_top_state():\n ./src/io/exp_flexer.cc:2106\n \tldr\tr3, [r0, #20]\n \tldr\tr2, [r0, #28]\n \tadd.w\tr0, r3, #1073741824\t@ 0x40000000\n \tsubs\tr1, r0, #1\n@@ -2049921,27 +2049921,27 @@\n \tmovs\tr4, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n \tstrh\tr2, [r0, #58]\t@ 0x3a\n \tmovs\tr4, r1\n \tlsrs\tr0, r3, #27\n \tmovs\tr0, r0\n-\tsubs\tr5, #194\t@ 0xc2\n+\tsubs\tr5, #202\t@ 0xca\n \tmovs\tr1, r0\n-\tadd\tr4, pc, #488\t@ (adr r4, 3e4b6c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x225d4>)\n+\tadd\tr4, pc, #520\t@ (adr r4, 3e4b8c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x225f4>)\n \tmovs\tr0, r1\n \tstrh\tr6, [r1, #54]\t@ 0x36\n \tmovs\tr4, r1\n-\tadd\tr3, pc, #504\t@ (adr r3, 3e4b84 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x225ec>)\n+\tadd\tr3, pc, #536\t@ (adr r3, 3e4ba4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2260c>)\n \tmovs\tr0, r1\n-\tadd\tr3, pc, #880\t@ (adr r3, 3e4d00 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22768>)\n+\tadd\tr3, pc, #912\t@ (adr r3, 3e4d20 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22788>)\n \tmovs\tr0, r1\n-\tadd\tr3, pc, #400\t@ (adr r3, 3e4b24 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2258c>)\n+\tadd\tr3, pc, #432\t@ (adr r3, 3e4b44 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x225ac>)\n \tmovs\tr0, r1\n-\tadd\tr3, pc, #632\t@ (adr r3, 3e4c10 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22678>)\n+\tadd\tr3, pc, #664\t@ (adr r3, 3e4c30 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22698>)\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n Notify::Notify(unsigned char, char const*):\n ./src/errorhandling/errorhandling.C:41\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, lr}\n \tmov\tr4, r0\n@@ -2050839,33 +2050839,33 @@\n \tmovs\tr0, r0\n \tstrh\tr0, [r7, #30]\n \tmovs\tr4, r1\n \tstrh\tr0, [r5, #30]\n \tmovs\tr4, r1\n \tlsrs\tr4, r4, #2\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #272\t@ (adr r1, 3e5070 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22ad8>)\n+\tadd\tr1, pc, #304\t@ (adr r1, 3e5090 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22af8>)\n \tmovs\tr0, r1\n-\tadd\tr3, pc, #656\t@ (adr r3, 3e51f4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22c5c>)\n+\tadd\tr3, pc, #688\t@ (adr r3, 3e5214 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22c7c>)\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr0, pc, #288\t@ (adr r0, 3e508c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22af4>)\n+\tadd\tr0, pc, #320\t@ (adr r0, 3e50ac , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b14>)\n \tmovs\tr0, r1\n-\tadd\tr1, pc, #408\t@ (adr r1, 3e5108 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b70>)\n+\tadd\tr1, pc, #440\t@ (adr r1, 3e5128 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b90>)\n \tmovs\tr0, r1\n-\tadd\tr1, pc, #896\t@ (adr r1, 3e52f4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22d5c>)\n+\tadd\tr1, pc, #928\t@ (adr r1, 3e5314 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22d7c>)\n \tmovs\tr0, r1\n-\tadd\tr2, pc, #808\t@ (adr r2, 3e52a0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22d08>)\n+\tadd\tr2, pc, #840\t@ (adr r2, 3e52c0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22d28>)\n \tmovs\tr0, r1\n-\tadd\tr2, pc, #952\t@ (adr r2, 3e5334 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22d9c>)\n+\tadd\tr2, pc, #984\t@ (adr r2, 3e5354 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22dbc>)\n \tmovs\tr0, r1\n-\tadd\tr2, pc, #704\t@ (adr r2, 3e5240 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22ca8>)\n+\tadd\tr2, pc, #736\t@ (adr r2, 3e5260 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22cc8>)\n \tmovs\tr0, r1\n-\tadd\tr2, pc, #8\t@ (adr r2, 3e4f8c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x229f4>)\n+\tadd\tr2, pc, #40\t@ (adr r2, 3e4fac , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22a14>)\n \tmovs\tr0, r1\n Flow::Flow(int):\n ./src/errorhandling/errorhandling.C:238\n \tmovs\tr2, #0\n \tstrd\tr1, r2, [r0]\n ./src/errorhandling/errorhandling.C:239\n \tbx\tlr\n@@ -2050991,29 +2050991,29 @@\n \tblx\tb998 >& std::__ostream_insert >(std::basic_ostream >&, char const*, int)@plt+0x4>\n /usr/include/c++/10/ostream:613\n \tb.n\t3e4fc0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22a28>\n std::ctype const& std::__check_facet >(std::ctype const*):\n /usr/include/c++/10/bits/basic_ios.h:50\n \tblx\tb310 \n \tnop\n-\tadd\tr1, pc, #552\t@ (adr r1, 3e5270 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22cd8>)\n+\tadd\tr1, pc, #584\t@ (adr r1, 3e5290 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22cf8>)\n \tmovs\tr0, r1\n \tldrb\tr0, [r7, #30]\n \tmovs\tr4, r1\n-\tadd\tr1, pc, #728\t@ (adr r1, 3e5328 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22d90>)\n+\tadd\tr1, pc, #760\t@ (adr r1, 3e5348 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22db0>)\n \tmovs\tr0, r1\n-\tadd\tr1, pc, #744\t@ (adr r1, 3e533c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22da4>)\n+\tadd\tr1, pc, #776\t@ (adr r1, 3e535c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22dc4>)\n \tmovs\tr0, r1\n \tlsrs\tr4, r4, #15\n \tmovs\tr0, r0\n-\tadd\tr1, pc, #104\t@ (adr r1, 3e50c4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b2c>)\n+\tadd\tr1, pc, #136\t@ (adr r1, 3e50e4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b4c>)\n \tmovs\tr0, r1\n-\tadd\tr1, pc, #192\t@ (adr r1, 3e5120 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b88>)\n+\tadd\tr1, pc, #224\t@ (adr r1, 3e5140 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22ba8>)\n \tmovs\tr0, r1\n-\tadd\tr1, pc, #40\t@ (adr r1, 3e508c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22af4>)\n+\tadd\tr1, pc, #72\t@ (adr r1, 3e50ac , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b14>)\n \tmovs\tr0, r1\n Flow::exitWhenUndefined():\n ./src/errorhandling/errorhandling.C:277\n \tldr\tr3, [r0, #0]\n \tcbz\tr3, 3e506a , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22ad2>\n \tbx\tlr\n ./src/errorhandling/errorhandling.C:274\n@@ -2051036,17 +2051036,17 @@\n \tadd\tr1, pc\n \tblx\tb700 <__cxa_throw@plt>\n ./src/errorhandling/errorhandling.C:278\n \tmov\tr0, r4\n \tblx\tba9c <__cxa_free_exception@plt>\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n-\tadd\tr1, pc, #56\t@ (adr r1, 3e50d8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b40>)\n+\tadd\tr1, pc, #88\t@ (adr r1, 3e50f8 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b60>)\n \tmovs\tr0, r1\n-\tadd\tr1, pc, #128\t@ (adr r1, 3e5124 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b8c>)\n+\tadd\tr1, pc, #160\t@ (adr r1, 3e5144 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22bac>)\n \tmovs\tr0, r1\n \tbl\t1cb0a6 , std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > >(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >&&)@@Base+0x2d272>\n \tldrb\tr6, [r7, #21]\n \tmovs\tr4, r1\n seenDebugger():\n ./src/debuggersupport/dbgsupport.C:33\n \tldr\tr3, [pc, #4]\t@ (3e50b4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b1c>)\n@@ -2051089,17 +2051089,17 @@\n \tldmia.w\tsp!, {r3, r4, r5, lr}\n ./src/debuggersupport/dbgsupport.C:49\n \tb.w\tb1ec \n ./src/debuggersupport/dbgsupport.C:53\n \tpop\t{r3, r4, r5, pc}\n \tnop\n \tstrex\tr0, r0, [fp, #56]\t@ 0x38\n-\tadds\tr5, #12\n+\tadds\tr5, #20\n \tmovs\tr5, r0\n-\tadd\tr0, pc, #1016\t@ (adr r0, 3e54f0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22f58>)\n+\tadd\tr1, pc, #24\t@ (adr r1, 3e5110 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b78>)\n \tmovs\tr0, r1\n miraDetectDebugger():\n ./src/debuggersupport/dbgsupport.C:56\n \tpush\t{r3, r4, r5, lr}\n miraDetectGDB():\n ./src/debuggersupport/dbgsupport.C:38\n \tmovs\tr3, #0\n@@ -2051133,17 +2051133,17 @@\n ./src/debuggersupport/dbgsupport.C:58\n \tldr\tr1, [pc, #16]\t@ (3e5138 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22ba0>)\n \tadd\tr1, pc\n ./src/debuggersupport/dbgsupport.C:59\n \tldrb\tr0, [r1, #0]\n \tpop\t{r3, r4, r5, pc}\n \t\t\t@ instruction: 0xe80b000e\n-\tadds\tr4, #204\t@ 0xcc\n+\tadds\tr4, #212\t@ 0xd4\n \tmovs\tr5, r0\n-\tadd\tr0, pc, #760\t@ (adr r0, 3e5430 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22e98>)\n+\tadd\tr0, pc, #792\t@ (adr r0, 3e5450 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22eb8>)\n \tmovs\tr0, r1\n \tb.n\t3e510a , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x22b72>\n \tmovs\tr6, r1\n FmtText::wordWrap[abi:cxx11](char const*, unsigned int):\n ./src/util/fmttext.C:31\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr9, r0\n@@ -2051709,25 +2051709,25 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tnop\n \tldrb\tr0, [r3, #24]\n \tmovs\tr4, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr2, [r0, r5]\n+\tldr\tr2, [r1, r5]\n \tmovs\tr2, r0\n-\tldrsb\tr6, [r5, r5]\n+\tldrsb\tr6, [r6, r5]\n \tmovs\tr3, r0\n-\tldrh\tr2, [r3, #28]\n+\tldrh\tr2, [r4, #28]\n \tmovs\tr1, r0\n \tldrb\tr0, [r2, #16]\n \tmovs\tr4, r1\n-\tadds\tr7, #6\n+\tadds\tr7, #18\n \tmovs\tr0, r0\n-\tadds\tr6, #254\t@ 0xfe\n+\tadds\tr7, #10\n \tmovs\tr0, r0\n FmtText::makeTextSign[abi:cxx11](char const*, unsigned int):\n ./src/util/fmttext.C:88\n \tstmdb\tsp!, {r4, r5, r6, r7, r8, r9, sl, fp, lr}\n \tmov\tr4, r0\n \tldr.w\tr5, [pc, #1836]\t@ 3e5b8c , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x235f4>\n \tvpush\t{d8}\n@@ -2053105,23 +2053105,23 @@\n /usr/include/c++/10/ext/new_allocator.h:89\n \tblx\tbc88 <__cxa_end_cleanup@plt>\n \tb.n\t3e5b78 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x235e0>\n \tldrb\tr0, [r6, #11]\n \tmovs\tr4, r1\n \tlsrs\tr0, r2, #23\n \tmovs\tr0, r0\n-\tldr\tr3, [sp, #744]\t@ 0x2e8\n+\tldr\tr3, [sp, #776]\t@ 0x308\n \tmovs\tr0, r1\n-\tldr\tr2, [sp, #176]\t@ 0xb0\n+\tldr\tr2, [sp, #208]\t@ 0xd0\n \tmovs\tr0, r1\n \tstrb\tr4, [r3, #23]\n \tmovs\tr4, r1\n-\tcmp\tr7, #174\t@ 0xae\n+\tcmp\tr7, #186\t@ 0xba\n \tmovs\tr0, r0\n-\tcmp\tr7, #166\t@ 0xa6\n+\tcmp\tr7, #178\t@ 0xb2\n \tmovs\tr0, r0\n __libc_csu_init():\n \tstmdb\tsp!, {r3, r4, r5, r6, r7, r8, r9, lr}\n \tmov\tr7, r0\n \tldr\tr6, [pc, #48]\t@ (3e5be0 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x23648>)\n \tldr\tr5, [pc, #48]\t@ (3e5be4 , bool> std::_Rb_tree, std::less, std::allocator >::_M_insert_unique(unsigned int const&)@@Base+0x2364c>)\n \tmov\tr8, r1\n"}, {"source1": "readelf --wide --decompress --hex-dump=.rodata {}", "source2": "readelf --wide --decompress --hex-dump=.rodata {}", "unified_diff": "@@ -137,18599 +137,18599 @@\n 0x003e6468 7468206c 6f63616c 65207365 7474696e th locale settin\n 0x003e6478 67732e0a 5573696e 67207468 65204c43 gs..Using the LC\n 0x003e6488 5f414c4c 3d432077 6f726b61 726f756e _ALL=C workaroun\n 0x003e6498 642e0a49 6620796f 7520646f 6e277420 d..If you don't \n 0x003e64a8 77616e74 20746861 742c2066 69782079 want that, fix y\n 0x003e64b8 6f757220 73797374 656d203b 2d290a00 our system ;-)..\n 0x003e64c8 436f6d70 696c6564 2062793a 20706275 Compiled by: pbu\n- 0x003e64d8 696c6465 72310a4d 6f6e204a 616e2020 ilder1.Mon Jan \n- 0x003e64e8 38203030 3a31393a 3238202d 31322032 8 00:19:28 -12 2\n- 0x003e64f8 3032340a 4f6e3a20 4c696e75 78206666 024.On: Linux ff\n- 0x003e6508 34612036 2e312e30 2d31372d 61726d6d 4a 6.1.0-17-armm\n- 0x003e6518 702d6c70 61652023 3120534d 50204465 p-lpae #1 SMP De\n- 0x003e6528 6269616e 20362e31 2e36392d 31202832 bian 6.1.69-1 (2\n- 0x003e6538 3032332d 31322d33 30292061 726d7637 023-12-30) armv7\n- 0x003e6548 6c20474e 552f4c69 6e75780a 00000000 l GNU/Linux.....\n- 0x003e6558 342e392e 36000000 6d697261 6d657209 4.9.6...miramer.\n- 0x003e6568 284d4952 414c4942 20766572 73696f6e (MIRALIB version\n- 0x003e6578 20000000 41757468 6f723a20 42617374 ...Author: Bast\n- 0x003e6588 69656e20 43686576 72657578 09286261 ien Chevreux.(ba\n- 0x003e6598 63684063 68657672 6575782e 6f726729 ch@chevreux.org)\n- 0x003e65a8 0a0a0000 4d697373 696e6720 6e616d65 ....Missing name\n- 0x003e65b8 206f6620 696e7075 742e0a00 4c6f6164 of input...Load\n- 0x003e65c8 696e6720 64617461 20696e74 6f206d65 ing data into me\n- 0x003e65d8 6d6f7279 202e2e2e 00000000 636f763d mory .......cov=\n- 0x003e65e8 285b5c64 5c2e5d2b 29000000 73746f64 ([\\d\\.]+)...stod\n- 0x003e65f8 00000000 20697320 6d697373 696e6720 .... is missing \n- 0x003e6608 6120636f 76657261 6765206e 756d6265 a coverage numbe\n- 0x003e6618 7220696e 20746865 20666f72 6d206f66 r in the form of\n- 0x003e6628 2027636f 763d7878 2e787878 2720696e 'cov=xx.xxx' in\n- 0x003e6638 20697473 20636f6d 6d656e74 732e0a00 its comments...\n- 0x003e6648 536f7272 792c2066 69782074 6861742e Sorry, fix that.\n- 0x003e6658 0a000000 68633a6a 3a6b3a76 00000000 ....hc:j:k:v....\n- 0x003e6668 6d697261 09094d49 52414c49 42207665 mira..MIRALIB ve\n- 0x003e6678 7273696f 6e200000 0a417574 686f723a rsion ...Author:\n- 0x003e6688 09094261 73746965 6e204368 65767265 ..Bastien Chevre\n- 0x003e6698 75782028 62616368 40636865 76726575 ux (bach@chevreu\n- 0x003e66a8 782e6f72 67290a50 7572706f 73653a09 x.org).Purpose:.\n- 0x003e66b8 2e2e2e0a 0a000000 55736167 653a0a2c ........Usage:.,\n- 0x003e66c8 2c2c2c20 2e2e2e0a 00000000 0a4f7074 ,,, .........Opt\n- 0x003e66d8 696f6e73 3a0a0000 20202d68 202f202d ions:... -h / -\n- 0x003e66e8 2d68656c 70090909 09546869 73206865 -help....This he\n- 0x003e66f8 6c702074 6578740a 20202d76 202f202d lp text. -v / -\n- 0x003e6708 2d766572 73696f6e 09090950 72696e74 -version...Print\n- 0x003e6718 20766572 73696f6e 20616e64 20657869 version and exi\n- 0x003e6728 740a0000 536f7272 792c202d 6b20666f t...Sorry, -k fo\n- 0x003e6738 72206b6d 65722073 697a6520 6d757374 r kmer size must\n- 0x003e6748 20626520 3c3d2033 3220666f 72207468 be <= 32 for th\n- 0x003e6758 65207469 6d652062 65696e67 2e0a0000 e time being....\n- 0x003e6768 696e7420 4d697261 5343453a 3a6d6169 int MiraSCE::mai\n- 0x003e6778 6e536967 6e696669 63616e74 436f6e74 nSignificantCont\n- 0x003e6788 69674578 74726163 74696f6e 28696e74 igExtraction(int\n- 0x003e6798 20617267 632c2063 68617220 2a2a2061 argc, char ** a\n- 0x003e67a8 72677629 00000000 4e554c00 534f4800 rgv)....NUL.SOH.\n- 0x003e67b8 53545800 45545800 454f5400 454e5100 STX.ETX.EOT.ENQ.\n- 0x003e67c8 41434b00 616c6572 74000000 6261636b ACK.alert...back\n- 0x003e67d8 73706163 65000000 74616200 6e65776c space...tab.newl\n- 0x003e67e8 696e6500 76657274 6963616c 2d746162 ine.vertical-tab\n- 0x003e67f8 00000000 666f726d 2d666565 64000000 ....form-feed...\n- 0x003e6808 63617272 69616765 2d726574 75726e00 carriage-return.\n- 0x003e6818 534f0000 53490000 444c4500 44433100 SO..SI..DLE.DC1.\n- 0x003e6828 44433200 44433300 44433400 4e414b00 DC2.DC3.DC4.NAK.\n- 0x003e6838 53594e00 45544200 43414e00 454d0000 SYN.ETB.CAN.EM..\n- 0x003e6848 53554200 45534300 49533400 49533300 SUB.ESC.IS4.IS3.\n- 0x003e6858 49533200 49533100 6578636c 616d6174 IS2.IS1.exclamat\n- 0x003e6868 696f6e2d 6d61726b 00000000 71756f74 ion-mark....quot\n- 0x003e6878 6174696f 6e2d6d61 726b0000 6e756d62 ation-mark..numb\n- 0x003e6888 65722d73 69676e00 646f6c6c 61722d73 er-sign.dollar-s\n- 0x003e6898 69676e00 70657263 656e742d 7369676e ign.percent-sign\n- 0x003e68a8 00000000 616d7065 7273616e 64000000 ....ampersand...\n- 0x003e68b8 61706f73 74726f70 68650000 6c656674 apostrophe..left\n- 0x003e68c8 2d706172 656e7468 65736973 00000000 -parenthesis....\n- 0x003e68d8 72696768 742d7061 72656e74 68657369 right-parenthesi\n- 0x003e68e8 73000000 61737465 7269736b 00000000 s...asterisk....\n- 0x003e68f8 706c7573 2d736967 6e000000 636f6d6d plus-sign...comm\n- 0x003e6908 61000000 68797068 656e0000 70657269 a...hyphen..peri\n- 0x003e6918 6f640000 7a65726f 00000000 6f6e6500 od..zero....one.\n- 0x003e6928 74776f00 74687265 65000000 666f7572 two.three...four\n- 0x003e6938 00000000 66697665 00000000 73697800 ....five....six.\n- 0x003e6948 73657665 6e000000 65696768 74000000 seven...eight...\n- 0x003e6958 6e696e65 00000000 73656d69 636f6c6f nine....semicolo\n- 0x003e6968 6e000000 6c657373 2d746861 6e2d7369 n...less-than-si\n- 0x003e6978 676e0000 65717561 6c732d73 69676e00 gn..equals-sign.\n- 0x003e6988 67726561 7465722d 7468616e 2d736967 greater-than-sig\n- 0x003e6998 6e000000 71756573 74696f6e 2d6d6172 n...question-mar\n- 0x003e69a8 6b000000 636f6d6d 65726369 616c2d61 k...commercial-a\n- 0x003e69b8 74000000 42000000 46000000 48000000 t...B...F...H...\n- 0x003e69c8 49000000 4a000000 4b000000 4c000000 I...J...K...L...\n- 0x003e69d8 4d000000 4f000000 50000000 51000000 M...O...P...Q...\n- 0x003e69e8 55000000 56000000 57000000 5a000000 U...V...W...Z...\n- 0x003e69f8 6c656674 2d737175 6172652d 62726163 left-square-brac\n- 0x003e6a08 6b657400 6261636b 736c6173 68000000 ket.backslash...\n- 0x003e6a18 72696768 742d7371 75617265 2d627261 right-square-bra\n- 0x003e6a28 636b6574 00000000 63697263 756d666c cket....circumfl\n- 0x003e6a38 65780000 756e6465 7273636f 72650000 ex..underscore..\n- 0x003e6a48 67726176 652d6163 63656e74 00000000 grave-accent....\n- 0x003e6a58 62000000 63000000 69000000 6a000000 b...c...i...j...\n- 0x003e6a68 75000000 76000000 7a000000 6c656674 u...v...z...left\n- 0x003e6a78 2d637572 6c792d62 7261636b 65740000 -curly-bracket..\n- 0x003e6a88 76657274 6963616c 2d6c696e 65000000 vertical-line...\n- 0x003e6a98 72696768 742d6375 726c792d 62726163 right-curly-brac\n- 0x003e6aa8 6b657400 74696c64 65000000 44454c00 ket.tilde...DEL.\n- 0x003e6ab8 616c6e75 6d000000 616c7068 61000000 alnum...alpha...\n- 0x003e6ac8 626c616e 6b000000 636e7472 6c000000 blank...cntrl...\n- 0x003e6ad8 64696769 74000000 67726170 68000000 digit...graph...\n- 0x003e6ae8 6c6f7765 72000000 7072696e 74000000 lower...print...\n- 0x003e6af8 70756e63 74000000 75707065 72000000 punct...upper...\n- 0x003e6b08 78646967 69740000 636f6e73 74207374 xdigit..const st\n- 0x003e6b18 643a3a73 7472696e 67202620 53747269 d::string & Stri\n- 0x003e6b28 6e67436f 6e746169 6e65723a 3a676574 ngContainer::get\n- 0x003e6b38 456e7472 7928456e 74727920 65290000 Entry(Entry e)..\n- 0x003e6b48 68656c70 00000000 6b6d6572 73697a65 help....kmersize\n- 0x003e6b58 00000000 76657273 696f6e00 556e6578 ....version.Unex\n- 0x003e6b68 70656374 65642065 6e64206f 66207265 pected end of re\n- 0x003e6b78 67657820 7768656e 20657363 6170696e gex when escapin\n- 0x003e6b88 672e0000 556e6578 70656374 65642065 g...Unexpected e\n- 0x003e6b98 6e64206f 66207265 67657820 7768656e nd of regex when\n- 0x003e6ba8 20726561 64696e67 20636f6e 74726f6c reading control\n- 0x003e6bb8 20636f64 652e0000 556e6578 70656374 code...Unexpect\n- 0x003e6bc8 65642065 6e64206f 66207265 67657820 ed end of regex \n- 0x003e6bd8 7768656e 20617363 69692063 68617261 when ascii chara\n- 0x003e6be8 63746572 2e000000 53747269 6e67436f cter....StringCo\n- 0x003e6bf8 6e746169 6e65723a 20000000 0a547269 ntainer: ....Tri\n- 0x003e6c08 65642074 6f206765 74206e6f 6e2d6578 ed to get non-ex\n- 0x003e6c18 69737465 6e742065 6e747279 3a200000 istent entry: ..\n- 0x003e6c28 76656374 6f723a3a 5f4d5f72 65616c6c vector::_M_reall\n- 0x003e6c38 6f635f69 6e736572 74000000 63616e6e oc_insert...cann\n- 0x003e6c48 6f742063 72656174 65207374 643a3a76 ot create std::v\n- 0x003e6c58 6563746f 72206c61 72676572 20746861 ector larger tha\n- 0x003e6c68 6e206d61 785f7369 7a652829 00000000 n max_size()....\n- 0x003e6c78 556e6578 70656374 65642065 73636170 Unexpected escap\n- 0x003e6c88 65206368 61726163 7465722e 00000000 e character.....\n- 0x003e6c98 556e6578 70656374 65642065 6e64206f Unexpected end o\n- 0x003e6ca8 66207265 67657820 7768656e 20696e20 f regex when in \n- 0x003e6cb8 616e206f 70656e20 70617265 6e746865 an open parenthe\n- 0x003e6cc8 7369732e 00000000 496e7661 6c696420 sis.....Invalid \n- 0x003e6cd8 73706563 69616c20 6f70656e 20706172 special open par\n- 0x003e6ce8 656e7468 65736973 2e000000 556e6578 enthesis....Unex\n- 0x003e6cf8 70656374 65642065 6e64206f 66207265 pected end of re\n- 0x003e6d08 67657820 7768656e 20696e20 62726163 gex when in brac\n- 0x003e6d18 65206578 70726573 73696f6e 2e000000 e expression....\n- 0x003e6d28 556e6578 70656374 65642063 68617261 Unexpected chara\n- 0x003e6d38 63746572 20696e20 62726163 65206578 cter in brace ex\n- 0x003e6d48 70726573 73696f6e 2e000000 556e6578 pression....Unex\n- 0x003e6d58 70656374 65642065 6e64206f 66206368 pected end of ch\n- 0x003e6d68 61726163 74657220 636c6173 732e0000 aracter class...\n- 0x003e6d78 556e6578 70656374 65642065 6e64206f Unexpected end o\n- 0x003e6d88 66207265 67657820 7768656e 20696e20 f regex when in \n- 0x003e6d98 62726163 6b657420 65787072 65737369 bracket expressi\n- 0x003e6da8 6f6e2e00 556e6578 70656374 65642063 on..Unexpected c\n- 0x003e6db8 68617261 63746572 20636c61 7373206f haracter class o\n- 0x003e6dc8 70656e20 62726163 6b65742e 00000000 pen bracket.....\n- 0x003e6dd8 5e245c2e 2a2b3f28 295b5d7b 7d7c0000 ^$\\.*+?()[]{}|..\n- 0x003e6de8 2e5b5c28 292a2b3f 7b7c5e24 00000000 .[\\()*+?{|^$....\n- 0x003e6df8 2e5b5c2a 5e240000 2e5b5c28 292a2b3f .[\\*^$...[\\()*+?\n- 0x003e6e08 7b7c5e24 0a000000 2e5b5c2a 5e240a00 {|^$.....[\\*^$..\n- 0x003e6e18 4e756d62 6572206f 66204e46 41207374 Number of NFA st\n- 0x003e6e28 61746573 20657863 65656473 206c696d ates exceeds lim\n- 0x003e6e38 69742e20 506c6561 73652075 73652073 it. Please use s\n- 0x003e6e48 686f7274 65722072 65676578 20737472 horter regex str\n- 0x003e6e58 696e672c 206f7220 75736520 736d616c ing, or use smal\n- 0x003e6e68 6c657220 62726163 65206578 70726573 ler brace expres\n- 0x003e6e78 73696f6e 2c206f72 206d616b 65205f47 sion, or make _G\n- 0x003e6e88 4c494243 58585f52 45474558 5f535441 LIBCXX_REGEX_STA\n- 0x003e6e98 54455f4c 494d4954 206c6172 6765722e TE_LIMIT larger.\n- 0x003e6ea8 00000000 556e6578 70656374 65642062 ....Unexpected b\n- 0x003e6eb8 61636b2d 72656665 72656e63 6520696e ack-reference in\n- 0x003e6ec8 20706f6c 796e6f6d 69616c20 6d6f6465 polynomial mode\n- 0x003e6ed8 2e000000 4261636b 2d726566 6572656e ....Back-referen\n- 0x003e6ee8 63652069 6e646578 20657863 65656473 ce index exceeds\n- 0x003e6ef8 20637572 72656e74 20737562 2d657870 current sub-exp\n- 0x003e6f08 72657373 696f6e20 636f756e 742e0000 ression count...\n- 0x003e6f18 4261636b 2d726566 6572656e 63652072 Back-reference r\n- 0x003e6f28 65666572 72656420 746f2061 6e206f70 eferred to an op\n- 0x003e6f38 656e6564 20737562 2d657870 72657373 ened sub-express\n- 0x003e6f48 696f6e2e 00000000 63616e6e 6f742063 ion.....cannot c\n- 0x003e6f58 72656174 65207374 643a3a64 65717565 reate std::deque\n- 0x003e6f68 206c6172 67657220 7468616e 206d6178 larger than max\n- 0x003e6f78 5f73697a 65282900 496e7661 6c696420 _size().Invalid \n- 0x003e6f88 63686172 61637465 7220636c 6173732e character class.\n- 0x003e6f98 00000000 4e6f7468 696e6720 746f2072 ....Nothing to r\n- 0x003e6fa8 65706561 74206265 666f7265 20612071 epeat before a q\n- 0x003e6fb8 75616e74 69666965 722e0000 556e6578 uantifier...Unex\n- 0x003e6fc8 70656374 65642074 6f6b656e 20696e20 pected token in \n- 0x003e6fd8 62726163 65206578 70726573 73696f6e brace expression\n- 0x003e6fe8 2e000000 556e6578 70656374 65642065 ....Unexpected e\n- 0x003e6ff8 6e64206f 66206272 61636520 65787072 nd of brace expr\n- 0x003e7008 65737369 6f6e2e00 496e7661 6c696420 ession..Invalid \n- 0x003e7018 72616e67 6520696e 20627261 63652065 range in brace e\n- 0x003e7028 78707265 7373696f 6e2e0000 496e7661 xpression...Inva\n- 0x003e7038 6c696420 636f6c6c 61746520 656c656d lid collate elem\n- 0x003e7048 656e742e 00000000 496e7661 6c696420 ent.....Invalid \n- 0x003e7058 65717569 76616c65 6e636520 636c6173 equivalence clas\n- 0x003e7068 732e0000 556e6578 70656374 65642064 s...Unexpected d\n- 0x003e7078 61736820 696e2062 7261636b 65742065 ash in bracket e\n- 0x003e7088 78707265 7373696f 6e2e2046 6f722050 xpression. For P\n- 0x003e7098 4f534958 2073796e 7461782c 20612064 OSIX syntax, a d\n- 0x003e70a8 61736820 6973206e 6f742074 72656174 ash is not treat\n- 0x003e70b8 6564206c 69746572 616c6c79 206f6e6c ed literally onl\n- 0x003e70c8 79207768 656e2069 74206973 20617420 y when it is at \n- 0x003e70d8 62656769 6e6e696e 67206f72 20656e64 beginning or end\n- 0x003e70e8 2e000000 496e7661 6c696420 72616e67 ....Invalid rang\n- 0x003e70f8 6520696e 20627261 636b6574 20657870 e in bracket exp\n- 0x003e7108 72657373 696f6e2e 00000000 43686172 ression.....Char\n- 0x003e7118 61637465 72206973 20657870 65637465 acter is expecte\n- 0x003e7128 64206166 74657220 61206461 73682e00 d after a dash..\n- 0x003e7138 556e6578 70656374 65642063 68617261 Unexpected chara\n- 0x003e7148 63746572 20696e20 62726163 6b657420 cter in bracket \n- 0x003e7158 65787072 65737369 6f6e2e00 50617265 expression..Pare\n- 0x003e7168 6e746865 73697320 6973206e 6f742063 nthesis is not c\n- 0x003e7178 6c6f7365 642e0000 53743131 5f4d7574 losed...St11_Mut\n- 0x003e7188 65785f62 61736549 4c4e395f 5f676e75 ex_baseILN9__gnu\n- 0x003e7198 5f637878 31325f4c 6f636b5f 706f6c69 _cxx12_Lock_poli\n- 0x003e71a8 63794532 45450000 53743139 5f53705f cyE2EE..St19_Sp_\n- 0x003e71b8 6d616b65 5f736861 7265645f 74616700 make_shared_tag.\n- 0x003e71c8 53743136 5f53705f 636f756e 7465645f St16_Sp_counted_\n- 0x003e71d8 62617365 494c4e39 5f5f676e 755f6378 baseILN9__gnu_cx\n- 0x003e71e8 7831325f 4c6f636b 5f706f6c 69637945 x12_Lock_policyE\n- 0x003e71f8 32454500 53743233 5f53705f 636f756e 2EE.St23_Sp_coun\n- 0x003e7208 7465645f 7074725f 696e706c 61636549 ted_ptr_inplaceI\n- 0x003e7218 4e537438 5f5f6465 7461696c 345f4e46 NSt8__detail4_NF\n- 0x003e7228 41494e53 74375f5f 63787831 31313272 AINSt7__cxx1112r\n- 0x003e7238 65676578 5f747261 69747349 63454545 egex_traitsIcEEE\n- 0x003e7248 45536149 53355f45 4c4e395f 5f676e75 ESaIS5_ELN9__gnu\n- 0x003e7258 5f637878 31325f4c 6f636b5f 706f6c69 _cxx12_Lock_poli\n- 0x003e7268 63794532 45450000 4e537438 5f5f6465 cyE2EE..NSt8__de\n- 0x003e7278 7461696c 31315f41 6e794d61 74636865 tail11_AnyMatche\n- 0x003e7288 72494e53 74375f5f 63787831 31313272 rINSt7__cxx1112r\n- 0x003e7298 65676578 5f747261 69747349 6345454c egex_traitsIcEEL\n- 0x003e72a8 6230454c 6230454c 62304545 45000000 b0ELb0ELb0EEE...\n- 0x003e72b8 4e537438 5f5f6465 7461696c 31315f41 NSt8__detail11_A\n- 0x003e72c8 6e794d61 74636865 72494e53 74375f5f nyMatcherINSt7__\n- 0x003e72d8 63787831 31313272 65676578 5f747261 cxx1112regex_tra\n- 0x003e72e8 69747349 6345454c 6230454c 6230454c itsIcEELb0ELb0EL\n- 0x003e72f8 62314545 45000000 4e537438 5f5f6465 b1EEE...NSt8__de\n- 0x003e7308 7461696c 31315f41 6e794d61 74636865 tail11_AnyMatche\n- 0x003e7318 72494e53 74375f5f 63787831 31313272 rINSt7__cxx1112r\n- 0x003e7328 65676578 5f747261 69747349 6345454c egex_traitsIcEEL\n- 0x003e7338 6230454c 6231454c 62304545 45000000 b0ELb1ELb0EEE...\n- 0x003e7348 4e537438 5f5f6465 7461696c 31315f41 NSt8__detail11_A\n- 0x003e7358 6e794d61 74636865 72494e53 74375f5f nyMatcherINSt7__\n- 0x003e7368 63787831 31313272 65676578 5f747261 cxx1112regex_tra\n- 0x003e7378 69747349 6345454c 6230454c 6231454c itsIcEELb0ELb1EL\n- 0x003e7388 62314545 45000000 4e537438 5f5f6465 b1EEE...NSt8__de\n- 0x003e7398 7461696c 31315f41 6e794d61 74636865 tail11_AnyMatche\n- 0x003e73a8 72494e53 74375f5f 63787831 31313272 rINSt7__cxx1112r\n- 0x003e73b8 65676578 5f747261 69747349 6345454c egex_traitsIcEEL\n- 0x003e73c8 6231454c 6230454c 62304545 45000000 b1ELb0ELb0EEE...\n- 0x003e73d8 4e537438 5f5f6465 7461696c 31315f41 NSt8__detail11_A\n- 0x003e73e8 6e794d61 74636865 72494e53 74375f5f nyMatcherINSt7__\n- 0x003e73f8 63787831 31313272 65676578 5f747261 cxx1112regex_tra\n- 0x003e7408 69747349 6345454c 6231454c 6230454c itsIcEELb1ELb0EL\n- 0x003e7418 62314545 45000000 4e537438 5f5f6465 b1EEE...NSt8__de\n- 0x003e7428 7461696c 31315f41 6e794d61 74636865 tail11_AnyMatche\n- 0x003e7438 72494e53 74375f5f 63787831 31313272 rINSt7__cxx1112r\n- 0x003e7448 65676578 5f747261 69747349 6345454c egex_traitsIcEEL\n- 0x003e7458 6231454c 6231454c 62304545 45000000 b1ELb1ELb0EEE...\n- 0x003e7468 4e537438 5f5f6465 7461696c 31315f41 NSt8__detail11_A\n- 0x003e7478 6e794d61 74636865 72494e53 74375f5f nyMatcherINSt7__\n- 0x003e7488 63787831 31313272 65676578 5f747261 cxx1112regex_tra\n- 0x003e7498 69747349 6345454c 6231454c 6231454c itsIcEELb1ELb1EL\n- 0x003e74a8 62314545 45000000 4e537438 5f5f6465 b1EEE...NSt8__de\n- 0x003e74b8 7461696c 31325f43 6861724d 61746368 tail12_CharMatch\n- 0x003e74c8 6572494e 5374375f 5f637878 31313132 erINSt7__cxx1112\n- 0x003e74d8 72656765 785f7472 61697473 49634545 regex_traitsIcEE\n- 0x003e74e8 4c623045 4c623045 45450000 4e537438 Lb0ELb0EEE..NSt8\n- 0x003e74f8 5f5f6465 7461696c 31325f43 6861724d __detail12_CharM\n- 0x003e7508 61746368 6572494e 5374375f 5f637878 atcherINSt7__cxx\n- 0x003e7518 31313132 72656765 785f7472 61697473 1112regex_traits\n- 0x003e7528 49634545 4c623045 4c623145 45450000 IcEELb0ELb1EEE..\n- 0x003e7538 4e537438 5f5f6465 7461696c 31325f43 NSt8__detail12_C\n- 0x003e7548 6861724d 61746368 6572494e 5374375f harMatcherINSt7_\n- 0x003e7558 5f637878 31313132 72656765 785f7472 _cxx1112regex_tr\n- 0x003e7568 61697473 49634545 4c623145 4c623045 aitsIcEELb1ELb0E\n- 0x003e7578 45450000 4e537438 5f5f6465 7461696c EE..NSt8__detail\n- 0x003e7588 31325f43 6861724d 61746368 6572494e 12_CharMatcherIN\n- 0x003e7598 5374375f 5f637878 31313132 72656765 St7__cxx1112rege\n- 0x003e75a8 785f7472 61697473 49634545 4c623145 x_traitsIcEELb1E\n- 0x003e75b8 4c623145 45450000 4e537438 5f5f6465 Lb1EEE..NSt8__de\n- 0x003e75c8 7461696c 31355f42 7261636b 65744d61 tail15_BracketMa\n- 0x003e75d8 74636865 72494e53 74375f5f 63787831 tcherINSt7__cxx1\n- 0x003e75e8 31313272 65676578 5f747261 69747349 112regex_traitsI\n- 0x003e75f8 6345454c 6230454c 62304545 45000000 cEELb0ELb0EEE...\n- 0x003e7608 4e537438 5f5f6465 7461696c 31355f42 NSt8__detail15_B\n- 0x003e7618 7261636b 65744d61 74636865 72494e53 racketMatcherINS\n- 0x003e7628 74375f5f 63787831 31313272 65676578 t7__cxx1112regex\n- 0x003e7638 5f747261 69747349 6345454c 6230454c _traitsIcEELb0EL\n- 0x003e7648 62314545 45000000 4e537438 5f5f6465 b1EEE...NSt8__de\n- 0x003e7658 7461696c 31355f42 7261636b 65744d61 tail15_BracketMa\n- 0x003e7668 74636865 72494e53 74375f5f 63787831 tcherINSt7__cxx1\n- 0x003e7678 31313272 65676578 5f747261 69747349 112regex_traitsI\n- 0x003e7688 6345454c 6231454c 62304545 45000000 cEELb1ELb0EEE...\n- 0x003e7698 4e537438 5f5f6465 7461696c 31355f42 NSt8__detail15_B\n- 0x003e76a8 7261636b 65744d61 74636865 72494e53 racketMatcherINS\n- 0x003e76b8 74375f5f 63787831 31313272 65676578 t7__cxx1112regex\n- 0x003e76c8 5f747261 69747349 6345454c 6231454c _traitsIcEELb1EL\n- 0x003e76d8 62314545 45000000 77000000 77000000 b1EEE...w...w...\n- 0x003e76e8 00000000 00000000 5e000000 16000000 ........^.......\n- 0x003e76f8 24000000 17000000 2e000000 00000000 $...............\n- 0x003e7708 2a000000 14000000 2b000000 15000000 *.......+.......\n- 0x003e7718 3f000000 12000000 7c000000 13000000 ?.......|.......\n- 0x003e7728 0a000000 13000000 00000000 13000000 ................\n- 0x003e7738 30006208 660c6e0a 720d7409 760b0000 0.b.f.n.r.t.v...\n- 0x003e7748 22222f2f 5c5c6107 6208660c 6e0a720d \"\"//\\\\a.b.f.n.r.\n- 0x003e7758 7409760b 00000000 626c612e 6d616600 t.v.....bla.maf.\n- 0x003e7768 696e7420 4d697261 53636166 666f6c64 int MiraScaffold\n- 0x003e7778 3a3a6d61 696e4d69 72615363 6166666f ::mainMiraScaffo\n- 0x003e7788 6c642869 6e742061 7267632c 20636861 ld(int argc, cha\n- 0x003e7798 72202a2a 20617267 76290000 67656e65 r ** argv)..gene\n- 0x003e77a8 72696300 626f6f73 743a3a6d 75746578 ric.boost::mutex\n- 0x003e77b8 3a3a7e6d 75746578 28290000 2f757372 ::~mutex()../usr\n- 0x003e77c8 2f696e63 6c756465 2f626f6f 73742f74 /include/boost/t\n- 0x003e77d8 68726561 642f7074 68726561 642f6d75 hread/pthread/mu\n- 0x003e77e8 7465782e 68707000 21706f73 69783a3a tex.hpp.!posix::\n- 0x003e77f8 70746872 6561645f 6d757465 785f6465 pthread_mutex_de\n- 0x003e7808 7374726f 7928266d 29000000 436f6e74 stroy(&m)...Cont\n- 0x003e7818 726f6c2d 43207761 73206361 75676874 rol-C was caught\n- 0x003e7828 2e20436c 65616e69 6e672075 702c2074 . Cleaning up, t\n- 0x003e7838 68697320 6d617920 74616b65 20612066 his may take a f\n- 0x003e7848 65772073 65636f6e 64732e00 6d697261 ew seconds..mira\n- 0x003e7858 62616974 09284d49 52414c49 42207665 bait.(MIRALIB ve\n- 0x003e7868 7273696f 6e200000 4d495241 62616974 rsion ..MIRAbait\n- 0x003e7878 3a206120 27677265 7027206c 696b6520 : a 'grep' like \n- 0x003e7888 746f6f6c 20666f72 206b6d65 72732075 tool for kmers u\n- 0x003e7898 7020746f 20323536 2062700a 0a6d6972 p to 256 bp..mir\n- 0x003e78a8 61626169 74207365 6c656374 73207265 abait selects re\n- 0x003e78b8 61647320 66726f6d 20612072 65616420 ads from a read \n- 0x003e78c8 636f6c6c 65637469 6f6e2077 68696368 collection which\n- 0x003e78d8 20617265 20706172 746c7920 73696d69 are partly simi\n- 0x003e78e8 6c617220 6f722065 7175616c 20746f20 lar or equal to \n- 0x003e78f8 73657175 656e6365 73206465 66696e65 sequences define\n- 0x003e7908 64206173 20746172 67657420 62616974 d as target bait\n- 0x003e7918 732e2053 696d696c 61726974 79206973 s. Similarity is\n- 0x003e7928 20646566 696e6564 20627920 66696e64 defined by find\n- 0x003e7938 696e6720 61207573 65722d61 646a7573 ing a user-adjus\n- 0x003e7948 7461626c 65206e75 6d626572 206f6620 table number of \n- 0x003e7958 636f6d6d 6f6e206b 2d6d6572 73202873 common k-mers (s\n- 0x003e7968 65717565 6e636573 206f6620 6b20636f equences of k co\n- 0x003e7978 6e736563 75746976 65206261 73657329 nsecutive bases)\n- 0x003e7988 20776869 63682061 72652074 68652073 which are the s\n- 0x003e7998 616d6520 696e2074 68652062 61697420 ame in the bait \n- 0x003e79a8 73657175 656e6365 7320616e 64207468 sequences and th\n- 0x003e79b8 65207363 7265656e 65642073 65717565 e screened seque\n- 0x003e79c8 6e636573 20746f20 62652073 656c6563 nces to be selec\n- 0x003e79d8 7465642c 20656974 68657220 696e2066 ted, either in f\n- 0x003e79e8 6f727761 7264206f 7220666f 72776172 orward or forwar\n- 0x003e79f8 642f7265 76657273 6520636f 6d706c65 d/reverse comple\n- 0x003e7a08 6d656e74 20646972 65637469 6f6e2e20 ment direction. \n- 0x003e7a18 41646469 6e672061 20445553 542d6c69 Adding a DUST-li\n- 0x003e7a28 6b652072 65706561 74206669 6c746572 ke repeat filter\n- 0x003e7a38 20666f72 20726570 65617473 20757020 for repeats up \n- 0x003e7a48 34206261 73657320 6973206f 7074696f 4 bases is optio\n- 0x003e7a58 6e616c2e 200a5768 656e2075 73656420 nal. .When used \n- 0x003e7a68 6f6e2070 61697265 64206669 6c65732c on paired files,\n- 0x003e7a78 2073656c 65637473 20736571 75656e63 selects sequenc\n- 0x003e7a88 65732077 68657265 20617420 6c656173 es where at leas\n- 0x003e7a98 74206f6e 65206d61 7465206d 61746368 t one mate match\n- 0x003e7aa8 65732e0a 00000000 0a557361 67653a0a es.......Usage:.\n- 0x003e7ab8 00000000 6d697261 62616974 205b6f70 ....mirabait [op\n- 0x003e7ac8 74696f6e 735d0a09 097b2d62 20626169 tions]...{-b bai\n- 0x003e7ad8 7466696c 65205b2d 62202e2e 2e5d207c tfile [-b ...] |\n- 0x003e7ae8 202d4220 66696c65 207c202d 6a206a6f -B file | -j jo\n- 0x003e7af8 626c6962 72617279 7d0a0909 7b2d7020 blibrary}...{-p \n- 0x003e7b08 66696c65 5f312066 696c655f 32207c20 file_1 file_2 | \n- 0x003e7b18 2d502066 696c6533 7d2a205b 66696c65 -P file3}* [file\n- 0x003e7b28 34202e2e 2e5d0a0a 00000000 4d61696e 4 ...]......Main\n- 0x003e7b38 206f7074 696f6e73 3a0a0000 092d6220 options:....-b \n- 0x003e7b48 66696c65 09094c6f 61642062 61697420 file..Load bait \n- 0x003e7b58 73657175 656e6365 73206672 6f6d2066 sequences from f\n- 0x003e7b68 696c650a 09090920 286d756c 7469706c ile.... (multipl\n- 0x003e7b78 65202d62 20616c6c 6f776564 290a092d e -b allowed)..-\n- 0x003e7b88 42206669 6c650909 4c6f6164 20626169 B file..Load bai\n- 0x003e7b98 74732066 726f6d20 6b6d6572 20737461 ts from kmer sta\n- 0x003e7ba8 74697374 69637320 66696c65 2c206e6f tistics file, no\n- 0x003e7bb8 74206672 6f6d2073 65717565 6e636520 t from sequence \n- 0x003e7bc8 66696c65 732e0a09 0909204f 6e6c7920 files..... Only \n- 0x003e7bd8 6f6e6520 2d422061 6c6c6f77 65642c20 one -B allowed, \n- 0x003e7be8 63616e6e 6f742062 6520636f 6d62696e cannot be combin\n- 0x003e7bf8 65642077 69746820 2d622e0a 09090920 ed with -b..... \n- 0x003e7c08 28736565 202d4b20 666f7220 63726561 (see -K for crea\n- 0x003e7c18 74696e67 20737563 68206120 66696c65 ting such a file\n- 0x003e7c28 290a092d 6a206a6f 62090953 6574206f )..-j job..Set o\n- 0x003e7c38 7074696f 6e732066 6f722070 72656465 ptions for prede\n- 0x003e7c48 66696e65 64206a6f 62206672 6f6d2073 fined job from s\n- 0x003e7c58 7570706c 69656420 4d495241 206c6962 upplied MIRA lib\n- 0x003e7c68 72617279 0a090909 20437572 72656e74 rary.... Current\n- 0x003e7c78 6c792061 7661696c 61626c65 206a6f62 ly available job\n- 0x003e7c88 733a0a09 09092020 2072726e 61094261 s:.... rrna.Ba\n- 0x003e7c98 69742072 524e4120 73657175 656e6365 it rRNA sequence\n- 0x003e7ca8 73000000 0a092d70 2066696c 65312066 s.....-p file1 f\n- 0x003e7cb8 696c6532 094c6f61 64207061 69726564 ile2.Load paired\n- 0x003e7cc8 20736571 75656e63 65732074 6f207365 sequences to se\n- 0x003e7cd8 61726368 2066726f 6d206669 6c653120 arch from file1 \n- 0x003e7ce8 616e6420 66696c65 320a0909 09204669 and file2.... Fi\n- 0x003e7cf8 6c657320 6d757374 20636f6e 7461696e les must contain\n- 0x003e7d08 2073616d 65206e75 6d626572 206f6620 same number of \n- 0x003e7d18 73657175 656e6365 732c2073 65717565 sequences, seque\n- 0x003e7d28 6e636520 0a090909 206e616d 6573206d nce .... names m\n- 0x003e7d38 75737420 62652069 6e207361 6d65206f ust be in same o\n- 0x003e7d48 72646572 2e0a0909 09204d75 6c746970 rder..... Multip\n- 0x003e7d58 6c65202d 7020616c 6c6f7765 642c2062 le -p allowed, b\n- 0x003e7d68 7574206d 75737420 636f6d65 20626566 ut must come bef\n- 0x003e7d78 6f726520 6e6f6e2d 70616972 65640a09 ore non-paired..\n- 0x003e7d88 09092066 696c6573 2e0a092d 50206669 .. files...-P fi\n- 0x003e7d98 6c650909 4c6f6164 20706169 72656420 le..Load paired \n- 0x003e7da8 73657175 656e6365 73206672 6f6d2066 sequences from f\n- 0x003e7db8 696c650a 09090920 46696c65 206d7573 ile.... File mus\n- 0x003e7dc8 74206265 20696e74 65726c65 61766564 t be interleaved\n- 0x003e7dd8 3a207061 69727320 6d757374 20666f6c : pairs must fol\n- 0x003e7de8 6c6f7720 65616368 206f7468 65722c0a low each other,.\n- 0x003e7df8 09090920 6e6f6e2d 70616972 73206172 ... non-pairs ar\n- 0x003e7e08 65206e6f 7420616c 6c6f7765 642e0a09 e not allowed...\n- 0x003e7e18 0909204d 756c7469 706c6520 2d702061 .. Multiple -p a\n- 0x003e7e28 6c6c6f77 65642c20 62757420 6d757374 llowed, but must\n- 0x003e7e38 20636f6d 65206265 666f7265 206e6f6e come before non\n- 0x003e7e48 2d706169 7265640a 09090920 66696c65 -paired.... file\n- 0x003e7e58 732e0a00 0a092d6b 20696e74 09096b6d s.....-k int..km\n- 0x003e7e68 6572206c 656e6774 68206f66 20626169 er length of bai\n- 0x003e7e78 7420696e 20626173 65732028 3c3d3235 t in bases (<=25\n- 0x003e7e88 362c2064 65666175 6c743d33 31290a09 6, default=31)..\n- 0x003e7e98 2d6e2069 6e740909 4966203e 303a206d -n int..If >0: m\n- 0x003e7ea8 696e696d 756d206e 756d6265 72206f66 inimum number of\n- 0x003e7eb8 206b2d6d 65722062 61697473 206e6565 k-mer baits nee\n- 0x003e7ec8 64656420 28646566 61756c74 3d31290a ded (default=1).\n- 0x003e7ed8 09090949 66203c3d 303a2061 6c6c6f77 ...If <=0: allow\n- 0x003e7ee8 6564206e 756d6265 72206f66 206d6973 ed number of mis\n- 0x003e7ef8 73656420 6b6d6572 73206f76 65722073 sed kmers over s\n- 0x003e7f08 65717565 6e63650a 09090920 20202020 equence.... \n- 0x003e7f18 2020206c 656e6774 680a0000 0a092d64 length.....-d\n- 0x003e7f28 0909446f 206e6f74 20757365 206b6d65 ..Do not use kme\n- 0x003e7f38 72732077 69746820 6d696372 6f726570 rs with microrep\n- 0x003e7f48 65617473 20284455 53542d6c 696b652c eats (DUST-like,\n- 0x003e7f58 20736565 20616c73 6f202d44 290a092d see also -D)..-\n- 0x003e7f68 4420696e 74090953 6574206c 656e6774 D int..Set lengt\n- 0x003e7f78 68206f66 206d6963 726f7265 70656174 h of microrepeat\n- 0x003e7f88 7320696e 206b6d65 72732074 6f206469 s in kmers to di\n- 0x003e7f98 73636172 64206672 6f6d2062 6169742e scard from bait.\n- 0x003e7fa8 0a090909 20696e74 203e2030 206d6963 .... int > 0 mic\n- 0x003e7fb8 726f7265 70656174 206c656e 20696e20 rorepeat len in \n- 0x003e7fc8 70657263 656e7461 6765206f 66206b6d percentage of km\n- 0x003e7fd8 6572206c 656e6774 682e0a09 09092020 er length..... \n- 0x003e7fe8 20202020 20452e67 2e3a202d 6b203137 E.g.: -k 17\n- 0x003e7ff8 202d4420 3637202d 2d3e2031 312e3339 -D 67 --> 11.39\n- 0x003e8008 20626173 6573202d 2d3e2031 32206261 bases --> 12 ba\n- 0x003e8018 7365732e 0a090909 20696e74 203c2030 ses..... int < 0\n- 0x003e8028 206d6963 726f7265 70656174 206c656e microrepeat len\n- 0x003e8038 20696e20 62617365 732e0a09 09092069 in bases..... i\n- 0x003e8048 6e742021 3d203020 696d706c 69657320 nt != 0 implies \n- 0x003e8058 2d642c20 696e743d 30207475 726e7320 -d, int=0 turns \n- 0x003e8068 44555354 2066696c 74657220 6f66662e DUST filter off.\n- 0x003e8078 0a092d69 09095365 6c656374 73207365 ..-i..Selects se\n- 0x003e8088 7175656e 63657320 74686174 20646f20 quences that do \n- 0x003e8098 6e6f7420 68697420 62616974 0a092d49 not hit bait..-I\n- 0x003e80a8 09095365 6c656374 73207365 7175656e ..Selects sequen\n- 0x003e80b8 63657320 74686174 20686974 20616e64 ces that hit and\n- 0x003e80c8 20646f20 6e6f7420 68697420 62616974 do not hit bait\n- 0x003e80d8 2028746f 0a090909 20646966 66657265 (to.... differe\n- 0x003e80e8 6e742066 696c6573 290a092d 7209094e nt files)..-r..N\n- 0x003e80f8 6f206368 65636b69 6e67206f 66207265 o checking of re\n- 0x003e8108 76657273 6520636f 6d706c65 6d656e74 verse complement\n- 0x003e8118 20646972 65637469 6f6e0a09 2d740909 direction..-t..\n- 0x003e8128 4e756d62 6572206f 66207468 72656164 Number of thread\n- 0x003e8138 7320746f 20757365 20286465 6661756c s to use (defaul\n- 0x003e8148 743d3020 2d3e2075 7020746f 20342043 t=0 -> up to 4 C\n- 0x003e8158 50552063 6f726573 290a0000 0a4f7074 PU cores)....Opt\n- 0x003e8168 696f6e73 20666f72 206f7574 70757420 ions for output \n- 0x003e8178 64656669 6e697469 6f6e3a0a 00000000 definition:.....\n- 0x003e8188 4e6f726d 616c6c79 206d6972 61626169 Normally mirabai\n- 0x003e8198 74207772 69746573 20736570 61726174 t writes separat\n- 0x003e81a8 65207265 73756c74 2066696c 65732028 e result files (\n- 0x003e81b8 6e616d65 64202762 6169745f 6d617463 named 'bait_matc\n- 0x003e81c8 685f2a27 20616e64 20276261 69745f6d h_*' and 'bait_m\n- 0x003e81d8 6973735f 2a272920 666f7220 65616368 iss_*') for each\n- 0x003e81e8 20696e70 75742074 6f207468 65206375 input to the cu\n- 0x003e81f8 7272656e 74206469 72656374 6f72792e rrent directory.\n- 0x003e8208 20466f72 20636861 6e67696e 67207468 For changing th\n- 0x003e8218 69732062 65686176 696f7572 20616e64 is behaviour and\n- 0x003e8228 206f7468 65722072 656c6174 696e6720 other relating \n- 0x003e8238 746f206f 75747075 742c2075 73652074 to output, use t\n- 0x003e8248 68657365 206f7074 696f6e73 3a0a0000 hese options:...\n- 0x003e8258 092d6309 094e6f20 63617365 20636861 .-c..No case cha\n- 0x003e8268 6e676520 6f662073 65717565 6e636520 nge of sequence \n- 0x003e8278 746f2064 656e6f74 65206261 69742068 to denote bait h\n- 0x003e8288 6974730a 00000000 092d6c20 696e7409 its......-l int.\n- 0x003e8298 096c656e 67746820 6f662061 206c696e .length of a lin\n- 0x003e82a8 65202846 41535441 206f6e6c 792c2064 e (FASTA only, d\n- 0x003e82b8 65666175 6c742030 3d756e6c 696d6974 efault 0=unlimit\n- 0x003e82c8 6564290a 00000000 092d4b20 66696c65 ed)......-K file\n- 0x003e82d8 09095361 7665206b 6d657220 73746174 ..Save kmer stat\n- 0x003e82e8 69737469 63732074 6f202766 696c6527 istics to 'file'\n- 0x003e82f8 20287365 6520616c 736f202d 42290a00 (see also -B)..\n- 0x003e8308 092d4e20 6e616d65 09094368 616e6765 .-N name..Change\n- 0x003e8318 20746865 20707265 66697820 27626169 the prefix 'bai\n- 0x003e8328 74272074 6f203c6e 616d653e 0a090909 t' to ....\n- 0x003e8338 20486173 206e6f20 65666665 63742069 Has no effect i\n- 0x003e8348 66202d6f 2f2d4f20 69732075 73656420 f -o/-O is used \n- 0x003e8358 616e6420 74617267 65747320 61726520 and targets are \n- 0x003e8368 6e6f740a 09090920 64697265 63746f72 not.... director\n- 0x003e8378 6965730a 00000000 092d6f20 3c706174 ies......-o .Save sequence\n- 0x003e8398 73206d61 74636869 6e672062 61697420 s matching bait \n- 0x003e83a8 746f2070 6174680a 09090920 49662070 to path.... If p\n- 0x003e83b8 61746820 69732061 20646972 6563746f ath is a directo\n- 0x003e83c8 72792c20 77726974 65207365 70617261 ry, write separa\n- 0x003e83d8 74652066 696c6573 20696e74 6f207468 te files into th\n- 0x003e83e8 69730a09 09092064 69726563 746f7279 is.... directory\n- 0x003e83f8 2e204966 206e6f74 2c20636f 6d62696e . If not, combin\n- 0x003e8408 6520616c 6c206d61 74636869 6e672073 e all matching s\n- 0x003e8418 65717565 6e636573 2066726f 6d0a0909 equences from...\n- 0x003e8428 09207468 6520696e 70757420 66696c65 . the input file\n- 0x003e8438 28732920 696e746f 20612073 696e676c (s) into a singl\n- 0x003e8448 65206669 6c652073 70656369 66696564 e file specified\n- 0x003e8458 20627920 7468650a 09090920 70617468 by the.... path\n- 0x003e8468 2e0a0000 092d4f20 3c706174 683e094c .....-O .L\n- 0x003e8478 696b6520 2d6f2c20 62757420 666f7220 ike -o, but for \n- 0x003e8488 73657175 656e6365 73206e6f 74206d61 sequences not ma\n- 0x003e8498 74636869 6e670a00 0a4f7468 6572206f tching...Other o\n- 0x003e84a8 7074696f 6e733a0a 00000000 092d5420 ptions:......-T \n- 0x003e84b8 64697209 09557365 20276469 72272061 dir..Use 'dir' a\n- 0x003e84c8 73206469 72656374 6f727920 666f7220 s directory for \n- 0x003e84d8 74656d70 6f726172 79206669 6c657320 temporary files \n- 0x003e84e8 696e7374 65616420 6f660a09 09092063 instead of.... c\n- 0x003e84f8 75727265 6e742077 6f726b69 6e672064 urrent working d\n- 0x003e8508 69726563 746f7279 2e0a0000 092d6d20 irectory.....-m \n- 0x003e8518 696e7465 67657209 4d656d6f 72792074 integer.Memory t\n- 0x003e8528 6f207573 6520666f 7220636f 6d707574 o use for comput\n- 0x003e8538 696e6720 6b6d6572 20737461 74697374 ing kmer statist\n- 0x003e8548 6963730a 09090920 302e2e31 3030203d ics.... 0..100 =\n- 0x003e8558 20757365 20706572 63656e74 61676520 use percentage \n- 0x003e8568 6f662066 72656520 73797374 656d206d of free system m\n- 0x003e8578 656d6f72 790a0909 09203e31 3030203d emory.... >100 =\n- 0x003e8588 20616d6f 756e7420 6f66204d 69422074 amount of MiB t\n- 0x003e8598 6f207573 65202865 2e672e20 31363338 o use (e.g. 1638\n- 0x003e85a8 3420666f 72203136 20476942 290a0909 4 for 16 GiB)...\n- 0x003e85b8 09204465 6661756c 74203735 20283735 . Default 75 (75\n- 0x003e85c8 25206f66 20667265 65207379 7374656d % of free system\n- 0x003e85d8 206d656d 6f727929 2e0a0000 0a446566 memory).....Def\n- 0x003e85e8 696e696e 67206669 6c657320 74797065 ining files type\n- 0x003e85f8 7320746f 206c6f61 642f7361 76653a0a s to load/save:.\n- 0x003e8608 00000000 4e6f726d 616c6c79 206d6972 ....Normally mir\n- 0x003e8618 61626169 74207265 636f676e 69736573 abait recognises\n- 0x003e8628 20746865 2066696c 65207479 70657320 the file types \n- 0x003e8638 6163636f 7264696e 6720746f 20746865 according to the\n- 0x003e8648 2066696c 65206578 74656e73 696f6e20 file extension \n- 0x003e8658 28657665 6e207768 656e2070 61636b65 (even when packe\n- 0x003e8668 64292e20 496e2063 61736573 20796f75 d). In cases you\n- 0x003e8678 206e6565 6420746f 20666f72 63652061 need to force a\n- 0x003e8688 20636572 7461696e 2066696c 65207479 certain file ty\n- 0x003e8698 70652062 65636175 73652074 68652066 pe because the f\n- 0x003e86a8 696c6520 65787465 6e73696f 6e206973 ile extension is\n- 0x003e86b8 206e6f6e 2d737461 6e646172 642c2075 non-standard, u\n- 0x003e86c8 73652074 68652045 4d424f53 53206e6f se the EMBOSS no\n- 0x003e86d8 74617469 6f6e2074 6f20666f 72636520 tation to force \n- 0x003e86e8 61207479 70653a20 3c66696c 65747970 a type: ::. E.g., to tel\n- 0x003e8718 6c207468 61742022 736f6d65 66696c65 l that \"somefile\n- 0x003e8728 2e646174 22206973 20464153 54512c20 .dat\" is FASTQ, \n- 0x003e8738 7573653a 20666173 74713a3a 736f6d65 use: fastq::some\n- 0x003e8748 66696c65 2e646174 0a526563 6f676e69 file.dat.Recogni\n- 0x003e8758 73656420 74797065 73206172 653a2063 sed types are: c\n- 0x003e8768 61662c20 66617374 612c2066 61737471 af, fasta, fastq\n- 0x003e8778 2c206762 662c2067 626b2c20 67626666 , gbf, gbk, gbff\n- 0x003e8788 2c206d61 6620616e 64207068 642e0a0a , maf and phd...\n- 0x003e8798 4d495241 42414954 2077696c 6c207772 MIRABAIT will wr\n- 0x003e87a8 69746520 66696c65 7320696e 20746865 ite files in the\n- 0x003e87b8 2073616d 65206669 6c652074 79706520 same file type \n- 0x003e87c8 61732074 68652063 6f727265 73706f6e as the correspon\n- 0x003e87d8 64696e67 20696e70 75742066 696c6573 ding input files\n- 0x003e87e8 2e000000 0a457861 6d706c65 733a0a20 .....Examples:. \n- 0x003e87f8 206d6972 61626169 74202d62 20622e66 mirabait -b b.f\n- 0x003e8808 61737461 2066696c 652e6661 7374710a asta file.fastq.\n- 0x003e8818 20206d69 72616261 6974202d 49202d6a mirabait -I -j\n- 0x003e8828 2072726e 61202d70 2066696c 655f312e rrna -p file_1.\n- 0x003e8838 66617374 71206669 6c655f32 2e666173 fastq file_2.fas\n- 0x003e8848 74710a20 206d6972 61626169 74202d62 tq. mirabait -b\n- 0x003e8858 2062312e 66617374 61202d62 2062322e b1.fasta -b b2.\n- 0x003e8868 67626b20 66696c65 2e666173 74710a20 gbk file.fastq. \n- 0x003e8878 206d6972 61626169 74202d62 20666173 mirabait -b fas\n- 0x003e8888 74613a3a 62616974 732e6461 74202d70 ta::baits.dat -p\n- 0x003e8898 20666173 74713a3a 66696c65 5f312e64 fastq::file_1.d\n- 0x003e88a8 61742066 61737471 3a3a6669 6c655f32 at fastq::file_2\n- 0x003e88b8 2e646174 0a20206d 69726162 61697420 .dat. mirabait \n- 0x003e88c8 2d622062 2e666173 7461202d 70206669 -b b.fasta -p fi\n- 0x003e88d8 6c655f31 2e666173 74712066 696c655f le_1.fastq file_\n- 0x003e88e8 322e6661 73747120 2d502066 696c6533 2.fastq -P file3\n- 0x003e88f8 2e666173 74612066 696c6534 2e636166 .fasta file4.caf\n- 0x003e8908 0a20206d 69726162 61697420 2d49202d . mirabait -I -\n- 0x003e8918 6220622e 66617374 61202d70 2066696c b b.fasta -p fil\n- 0x003e8928 655f312e 66617374 71206669 6c655f32 e_1.fastq file_2\n- 0x003e8938 2e666173 7471202d 50206669 6c65332e .fastq -P file3.\n- 0x003e8948 66617374 61206669 6c65342e 6361660a fasta file4.caf.\n- 0x003e8958 20206d69 72616261 6974202d 6b203237 mirabait -k 27\n- 0x003e8968 202d6e20 3130202d 6220622e 66617374 -n 10 -b b.fast\n- 0x003e8978 61206669 6c652e66 61737471 0a20206d a file.fastq. m\n- 0x003e8988 69726162 61697420 2d622066 61737461 irabait -b fasta\n- 0x003e8998 3a3a622e 64617420 66617374 713a3a66 ::b.dat fastq::f\n- 0x003e89a8 696c652e 6461740a 20206d69 72616261 ile.dat. miraba\n- 0x003e89b8 6974202d 6f202f64 65762f73 686d2f20 it -o /dev/shm/ \n- 0x003e89c8 2d622062 2e666173 7461202d 70206669 -b b.fasta -p fi\n- 0x003e89d8 6c655f31 2e666173 74712066 696c655f le_1.fastq file_\n- 0x003e89e8 322e6661 7374710a 20206d69 72616261 2.fastq. miraba\n- 0x003e89f8 6974202d 6f202f64 65762f73 686d2f6d it -o /dev/shm/m\n- 0x003e8a08 61746368 202d6220 622e6661 73746120 atch -b b.fasta \n- 0x003e8a18 2d702066 696c655f 312e6661 73747120 -p file_1.fastq \n- 0x003e8a28 66696c65 5f322e66 61737471 0a20206d file_2.fastq. m\n- 0x003e8a38 69726162 61697420 2d622068 756d616e irabait -b human\n- 0x003e8a48 5f67656e 6f6d652e 66617374 61202d4b _genome.fasta -K\n- 0x003e8a58 2048475f 6b6d6572 73746174 732e6d68 HG_kmerstats.mh\n- 0x003e8a68 732e677a 202d7020 66696c65 312e6661 s.gz -p file1.fa\n- 0x003e8a78 73747120 66696c65 322e6661 7374710a stq file2.fastq.\n- 0x003e8a88 20206d69 72616261 6974202d 42204847 mirabait -B HG\n- 0x003e8a98 5f6b6d65 72737461 74732e6d 68732e67 _kmerstats.mhs.g\n- 0x003e8aa8 7a202d70 2066696c 65312e66 61737471 z -p file1.fastq\n- 0x003e8ab8 2066696c 65322e66 61737471 0a20206d file2.fastq. m\n- 0x003e8ac8 69726162 61697420 2d64202d 42204847 irabait -d -B HG\n- 0x003e8ad8 5f6b6d65 72737461 74732e6d 68732e67 _kmerstats.mhs.g\n- 0x003e8ae8 7a202d70 2066696c 65312e66 61737471 z -p file1.fastq\n- 0x003e8af8 2066696c 65322e66 61737471 0a000000 file2.fastq....\n- 0x003e8b08 62617369 635f7374 72696e67 3a3a6170 basic_string::ap\n- 0x003e8b18 70656e64 00000000 5f6d6174 63685f00 pend...._match_.\n- 0x003e8b28 5f6d6973 735f0000 0a0a436f 756c6420 _miss_....Could \n- 0x003e8b38 6e6f7420 6f70656e 20000000 2e0a446f not open .....Do\n- 0x003e8b48 65732074 68652070 61746820 65786973 es the path exis\n- 0x003e8b58 742c2069 73206974 20777269 7461626c t, is it writabl\n- 0x003e8b68 653f2049 73207468 65206469 736b2066 e? Is the disk f\n- 0x003e8b78 756c6c3f 00000000 2c20736f 7274696e ull?...., sortin\n- 0x003e8b88 67000000 2c206669 6c746572 696e6700 g..., filtering.\n- 0x003e8b98 2b2b2b20 6d617463 68657320 746f2000 +++ matches to .\n- 0x003e8ba8 2d2d2d20 6e6f6e2d 6d617463 68657320 --- non-matches \n- 0x003e8bb8 746f2000 556d6d6d 202e2e2e 20756e6b to .Ummm ... unk\n- 0x003e8bc8 6e6f776e 20706169 72737461 74757320 nown pairstatus \n- 0x003e8bd8 00000000 766f6964 204d6972 61426169 ....void MiraBai\n- 0x003e8be8 743a3a73 61766557 51756575 65456c65 t::saveWQueueEle\n- 0x003e8bf8 6d656e74 28777175 65756575 6e69745f ment(wqueueunit_\n- 0x003e8c08 74202620 77717529 00000000 4c6f6164 t & wqu)....Load\n- 0x003e8c18 696e6720 64617461 2066726f 6d200000 ing data from ..\n- 0x003e8c28 2e717561 6c000000 66617374 616e6f71 .qual...fastanoq\n- 0x003e8c38 75616c00 7b686364 69497050 7276613a ual.{hcdiIpPrva:\n- 0x003e8c48 623a423a 443a6a3a 6b3a4b3a 6c3a6d3a b:B:D:j:k:K:l:m:\n- 0x003e8c58 6e3a4e3a 6f3a4f3a 743a543a 00000000 n:N:o:O:t:T:....\n- 0x003e8c68 2d44206d 75737420 6265203e 2d313030 -D must be >-100\n- 0x003e8c78 3020616e 64203c3d 20313030 20696e20 0 and <= 100 in \n- 0x003e8c88 74686520 706f7369 0a000000 72726e61 the posi....rrna\n- 0x003e8c98 00000000 2f66696c 7465725f 64656661 ..../filter_defa\n- 0x003e8ca8 756c745f 72726e61 2e6d6873 2e677a00 ult_rrna.mhs.gz.\n- 0x003e8cb8 72524e41 00000000 466f756e 64202d6a rRNA....Found -j\n- 0x003e8cc8 2072726e 612e2045 71756976 616c656e rrna. Equivalen\n- 0x003e8cd8 74207365 7474696e 67733a0a 00000000 t settings:.....\n- 0x003e8ce8 2d422000 202d6e20 00000000 202d6400 -B . -n .... -d.\n- 0x003e8cf8 202d4e20 00000000 596f7520 73706563 -N ....You spec\n- 0x003e8d08 69666965 64202d6a 2072726e 612c2062 ified -j rrna, b\n- 0x003e8d18 7574204d 49524120 636f756c 64206e6f ut MIRA could no\n- 0x003e8d28 74206669 6e642074 68652064 65666175 t find the defau\n- 0x003e8d38 6c742072 524e4120 68617368 20737461 lt rRNA hash sta\n- 0x003e8d48 74697374 69637320 66696c65 20776869 tistics file whi\n- 0x003e8d58 63682073 686f756c 64206265 206c6f63 ch should be loc\n- 0x003e8d68 61746564 20617420 00000000 0a546869 ated at .....Thi\n- 0x003e8d78 73206973 20757375 616c6c79 20746865 s is usually the\n- 0x003e8d88 20636173 65207768 656e2079 6f752066 case when you f\n- 0x003e8d98 6f72676f 7420746f 2072756e 20746865 orgot to run the\n- 0x003e8da8 20736372 69707420 746f2069 6e737461 script to insta\n- 0x003e8db8 6c6c2074 68652072 524e4120 64617461 ll the rRNA data\n- 0x003e8dc8 2066726f 6d207468 65204d49 52412070 from the MIRA p\n- 0x003e8dd8 61636b61 67652e0a 0a576861 7420746f ackage...What to\n- 0x003e8de8 20646f3a 0a2d2069 6620796f 7520696e do:.- if you in\n- 0x003e8df8 7374616c 6c656420 66726f6d 20736f75 stalled from sou\n- 0x003e8e08 7263653a 20757365 20746865 20276d61 rce: use the 'ma\n- 0x003e8e18 6b652069 6e737461 6c6c2720 66756e63 ke install' func\n- 0x003e8e28 74696f6e 616c6974 792e0a2d 20696620 tionality..- if \n- 0x003e8e38 796f7520 696e7374 616c6c65 64206672 you installed fr\n- 0x003e8e48 6f6d2061 20707265 636f6d70 696c6564 om a precompiled\n- 0x003e8e58 2062696e 61726965 73207061 636b6167 binaries packag\n- 0x003e8e68 653a2067 6f20746f 20746865 20276462 e: go to the 'db\n- 0x003e8e78 696e7374 616c6c27 20646972 6563746f install' directo\n- 0x003e8e88 72792069 6e207468 61742070 61636b61 ry in that packa\n- 0x003e8e98 67652061 6e642074 7970650a 20202e2f ge and type. ./\n- 0x003e8ea8 6d697261 2d696e73 74616c6c 2d736c73 mira-install-sls\n- 0x003e8eb8 2d72726e 612e7368 20726661 6d5f7272 -rrna.sh rfam_rr\n- 0x003e8ec8 6e612d32 312d3132 2e736c73 2e677a0a na-21-12.sls.gz.\n- 0x003e8ed8 00000000 696e7420 6d61696e 4d697261 ....int mainMira\n- 0x003e8ee8 42616974 28696e74 20617267 632c2063 Bait(int argc, c\n- 0x003e8ef8 68617220 2a2a2061 72677629 00000000 har ** argv)....\n- 0x003e8f08 0a556e6b 6e6f776e 206a6f62 202d6a20 .Unknown job -j \n- 0x003e8f18 00000000 0a437572 72656e74 6c79206b .....Currently k\n- 0x003e8f28 6e6f776e 206a6f62 733a2027 72726e61 nown jobs: 'rrna\n- 0x003e8f38 27000000 4e6f2062 61697420 66696c65 '...No bait file\n- 0x003e8f48 73206465 66696e65 64207669 61202d62 s defined via -b\n- 0x003e8f58 20616e64 206e6f20 2d422067 6976656e and no -B given\n- 0x003e8f68 210a4469 6420796f 75207573 65207468 !.Did you use th\n- 0x003e8f78 6520636f 6d6d616e 64206c69 6e652066 e command line f\n- 0x003e8f88 6f722074 6865206f 6c64206d 69726162 or the old mirab\n- 0x003e8f98 61697420 283c3d20 342e302e 32293f0a ait (<= 4.0.2)?.\n- 0x003e8fa8 00000000 2d4b2067 6976656e 20616e64 ....-K given and\n- 0x003e8fb8 206e6f20 73657175 656e6365 2066696c no sequence fil\n- 0x003e8fc8 65732c20 77696c6c 206a7573 74206372 es, will just cr\n- 0x003e8fd8 65617465 2061206b 6d657220 73746174 eate a kmer stat\n- 0x003e8fe8 69737469 63732066 696c652e 0a000000 istics file.....\n- 0x003e8ff8 4d697373 696e6720 66696c65 7320746f Missing files to\n- 0x003e9008 20626169 74207365 7175656e 63657320 bait sequences \n- 0x003e9018 66726f6d 210a0000 556e6b6e 6f776e20 from!...Unknown \n- 0x003e9028 6f722069 6c6c6567 616c2066 696c6520 or illegal file \n- 0x003e9038 65787465 6e73696f 6e202700 2720696e extension '.' in\n- 0x003e9048 2066696c 65206e61 6d652000 0a0a436f file name ...Co\n- 0x003e9058 756c6420 6e6f7420 72656d6f 76652066 uld not remove f\n- 0x003e9068 696c6520 00000000 0a497320 69742077 ile .....Is it w\n- 0x003e9078 72697461 626c653f 00000000 50617273 ritable?....Pars\n- 0x003e9088 696e6720 73706563 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2073697a 65207361 76656420 kmer size saved \n- 0x003e9188 28000000 2920696e 20746865 20686173 (...) in the has\n- 0x003e9198 68207374 61746973 74696373 2066696c h statistics fil\n- 0x003e91a8 652e2054 68697320 69732074 72656174 e. This is treat\n- 0x003e91b8 65642061 73206572 726f722c 20626169 ed as error, bai\n- 0x003e91c8 6c696e67 206f7574 2e000000 53697a65 ling out....Size\n- 0x003e91d8 206f6620 6b6d6572 7320696e 2066696c of kmers in fil\n- 0x003e91e8 65200000 536f7272 792c2074 6865206d e ..Sorry, the m\n- 0x003e91f8 61782e20 6b6d6572 2073697a 65207375 ax. kmer size su\n- 0x003e9208 70706f72 74656420 61746d20 69732032 pported atm is 2\n- 0x003e9218 35362e0a 00000000 73697a65 6f666861 56......sizeofha\n- 0x003e9228 7368203d 3d200000 20697320 72617468 sh == .. is rath\n- 0x003e9238 65722075 6e657870 65637465 642e0000 er unexpected...\n- 0x003e9248 0a4e4f54 49434521 20596f75 20626169 .NOTICE! You bai\n- 0x003e9258 74656420 73657175 656e6365 73207768 ted sequences wh\n- 0x003e9268 69636820 68616420 636c6970 70696e67 ich had clipping\n- 0x003e9278 20696e66 6f726d61 74696f6e 20284341 information (CA\n- 0x003e9288 46206f72 204d4146 292e204d 69726162 F or MAF). Mirab\n- 0x003e9298 61697420 77696c6c 20686176 65206261 ait will have ba\n- 0x003e92a8 69746564 202a6f6e 6c792a20 696e2074 ited *only* in t\n- 0x003e92b8 68652075 6e636c69 70706564 20706172 he unclipped par\n- 0x003e92c8 7473206f 66207468 65207365 7175656e ts of the sequen\n- 0x003e92d8 63657320 28776869 63682061 72652074 ces (which are t\n- 0x003e92e8 686f7567 68742074 6f207265 70726573 hought to repres\n- 0x003e92f8 656e7420 27676f6f 642c2076 6961626c ent 'good, viabl\n- 0x003e9308 65272073 65717565 6e636529 2e0a0000 e' sequence)....\n- 0x003e9318 0a426169 74696e67 2070726f 63657373 .Baiting process\n- 0x003e9328 2066696e 69736865 642e0a0a 00000000 finished.......\n- 0x003e9338 4e756d62 6572206f 66206261 69742073 Number of bait s\n- 0x003e9348 65717565 6e636573 3a202020 00000000 equences: ....\n- 0x003e9358 546f7461 6c206e75 6d626572 206f6620 Total number of \n- 0x003e9368 73657175 656e6365 73207265 61643a20 sequences read: \n- 0x003e9378 00000000 50616972 73206261 69746564 ....Pairs baited\n- 0x003e9388 3a200000 25290a00 50616972 73206d69 : ..%)..Pairs mi\n- 0x003e9398 73736564 3a200000 556e7061 69726564 ssed: ..Unpaired\n- 0x003e93a8 20626169 7465643a 20000000 556e7061 baited: ...Unpa\n- 0x003e93b8 69726564 206d6973 7365643a 20000000 ired missed: ...\n- 0x003e93c8 4b6d6572 20737461 74697374 69637320 Kmer statistics \n- 0x003e93d8 66696c65 20736176 65642074 6f200000 file saved to ..\n- 0x003e93e8 20616e64 20697320 72656164 7920746f and is ready to\n- 0x003e93f8 20726575 73652076 6961202d 422e0a00 reuse via -B...\n- 0x003e9408 67620000 67626600 67626b00 67626666 gb..gbf.gbk.gbff\n- 0x003e9418 00000000 70686400 73636166 00000000 ....phd.scaf....\n- 0x003e9428 626f6f73 743a3a20 6d757465 7820636f boost:: mutex co\n- 0x003e9438 6e737472 7563746f 72206661 696c6564 nstructor failed\n- 0x003e9448 20696e20 70746872 6561645f 6d757465 in pthread_mute\n- 0x003e9458 785f696e 69740000 766f6964 204d6972 x_init..void Mir\n- 0x003e9468 61426169 743a3a64 6f426169 74576974 aBait::doBaitWit\n- 0x003e9478 68485328 48617368 53746174 69737469 hHS(HashStatisti\n- 0x003e9488 63733c54 56484153 485f543e 2026206d cs & m\n- 0x003e9498 62687329 00000000 7468726f 77000000 bhs)....throw...\n- 0x003e94a8 6c6f6164 68736600 52656164 20262052 loadhsf.Read & R\n- 0x003e94b8 65616443 6f6e7461 696e6572 3a3a6765 eadContainer::ge\n- 0x003e94c8 74526561 64287569 6e743332 20696e64 tRead(uint32 ind\n- 0x003e94d8 65782900 766f6964 20636865 636b4c69 ex).void checkLi\n- 0x003e94e8 62457869 7374656e 63652867 69645f74 bExistence(gid_t\n- 0x003e94f8 206c6962 69642900 6572726f 723a2069 libid).error: i\n- 0x003e9508 6e646578 20280000 29203e3d 2052435f ndex (..) >= RC_\n- 0x003e9518 706f6f6c 72707472 2e73697a 65282920 poolrptr.size() \n- 0x003e9528 28000000 6c696269 64200000 203e2052 (...libid .. > R\n- 0x003e9538 475f7374 61746963 5f696e66 6f6c6962 G_static_infolib\n- 0x003e9548 2e73697a 65282920 00000000 76656374 .size() ....vect\n- 0x003e9558 6f723a3a 5f4d5f64 65666175 6c745f61 or::_M_default_a\n- 0x003e9568 7070656e 64000000 76656374 6f723a3a ppend...vector::\n- 0x003e9578 5f4d5f66 696c6c5f 696e7365 72740000 _M_fill_insert..\n- 0x003e9588 4c6f6164 696e6720 66726f6d 20657869 Loading from exi\n- 0x003e9598 7374696e 67206861 73687374 61742066 sting hashstat f\n- 0x003e95a8 696c6520 2e2e2e20 00000000 646f6e65 ile ... ....done\n- 0x003e95b8 2e0a0000 4572726f 723a206b 6d657220 ....Error: kmer \n- 0x003e95c8 73697a65 20736574 20666f72 206d6972 size set for mir\n- 0x003e95d8 61626169 74202800 29206973 206e6f74 abait (.) is not\n- 0x003e95e8 20657175 616c2074 6f207468 65206b6d equal to the km\n- 0x003e95f8 65722073 697a6520 6c6f6164 65642066 er size loaded f\n- 0x003e9608 726f6d20 66696c65 20280000 29210a44 rom file (..)!.D\n- 0x003e9618 69642079 6f75206b 6e6f7720 796f7520 id you know you \n- 0x003e9628 63616e20 6c656176 65206f75 74202d6b can leave out -k\n- 0x003e9638 20776865 6e207573 696e6720 2d423f0a when using -B?.\n- 0x003e9648 41626f72 74696e67 210a0000 4e6f202d Aborting!...No -\n- 0x003e9658 6b206769 76656e2c 20757369 6e67206b k given, using k\n- 0x003e9668 2066726f 6d207468 65206c6f 61646564 from the loaded\n- 0x003e9678 2066696c 653a2000 5741524e 494e473a file: .WARNING:\n- 0x003e9688 206e6f74 20612073 696e676c 65206b6d not a single km\n- 0x003e9698 65722062 61697420 636f756c 64206265 er bait could be\n- 0x003e96a8 2067656e 65726174 65642e20 54686973 generated. This\n- 0x003e96b8 20697320 64756520 746f2074 68652073 is due to the s\n- 0x003e96c8 65717565 6e636573 20796f75 20617265 equences you are\n- 0x003e96d8 20757369 6e672074 6f206261 69742061 using to bait a\n- 0x003e96e8 72652061 6c6c2065 69746865 7220746f re all either to\n- 0x003e96f8 6f207368 6f727420 6f722063 6f6e7461 o short or conta\n- 0x003e9708 696e2074 6f6f206d 616e7920 636c6f73 in too many clos\n- 0x003e9718 656c7920 6c6f6361 74656420 49555041 ely located IUPA\n- 0x003e9728 4320636f 6465732e 0a546869 73206d61 C codes..This ma\n- 0x003e9738 79206265 20726967 68742c20 62757420 y be right, but \n- 0x003e9748 6d6f7374 2070726f 6261626c 79206973 most probably is\n- 0x003e9758 206e6f74 2e204966 206e6f74 3a206569 not. If not: ei\n- 0x003e9768 74686572 20636865 636b2079 6f757220 ther check your \n- 0x003e9778 62616974 20736571 75656e63 65732069 bait sequences i\n- 0x003e9788 6e207468 6520696e 70757420 66696c65 n the input file\n- 0x003e9798 73206f72 2063686f 6f736520 61206c6f s or choose a lo\n- 0x003e97a8 77657220 6b6d6572 2073697a 652e0000 wer kmer size...\n- 0x003e97b8 4b4d4552 20737461 74697374 69637320 KMER statistics \n- 0x003e97c8 64757374 65642061 6e642077 616e7473 dusted and wants\n- 0x003e97d8 20736176 65202e2e 2e207265 73617669 save ... resavi\n- 0x003e97e8 6e67206e 6f772e0a 00000000 536f6d65 ng now......Some\n- 0x003e97f8 7468696e 67277320 77726f6e 67206865 thing's wrong he\n- 0x003e9808 72653a20 2d702073 61797320 746f2065 re: -p says to e\n- 0x003e9818 78706563 74206f6e 65206675 72746865 xpect one furthe\n- 0x003e9828 72206669 6c652c20 62757420 00000000 r file, but ....\n- 0x003e9838 20697320 74686520 6c617374 2066696c is the last fil\n- 0x003e9848 65207365 656e206f 6e207468 6520636f e seen on the co\n- 0x003e9858 6d6d616e 64206c69 6e653f00 536f6d65 mmand line?.Some\n- 0x003e9868 7468696e 67277320 77726f6e 67206865 thing's wrong he\n- 0x003e9878 72653a20 2d702073 61797320 796f7520 re: -p says you \n- 0x003e9888 68617665 2074776f 2066696c 65732077 have two files w\n- 0x003e9898 69746820 72656164 73207061 69726564 ith reads paired\n- 0x003e98a8 20616372 6f737320 626f7468 2066696c across both fil\n- 0x003e98b8 65732e20 42757420 66696c65 20000000 es. But file ...\n- 0x003e98c8 20646f65 73206e6f 74206861 76652074 does not have t\n- 0x003e98d8 68652073 616d6520 6e756d62 6572206f he same number o\n- 0x003e98e8 66207265 61647320 61732066 696c6520 f reads as file \n- 0x003e98f8 00000000 50616972 65642065 6e642066 ....Paired end f\n- 0x003e9908 696c6573 206e6f74 2073796e 6368726f iles not synchro\n- 0x003e9918 6e697365 643a2072 65616420 6e616d65 nised: read name\n- 0x003e9928 20000000 206e6f74 20657175 616c2074 ... not equal t\n- 0x003e9938 6f200000 20616e64 2074656d 706c6174 o .. and templat\n- 0x003e9948 65732061 6c736f20 646f206e 6f74206d es also do not m\n- 0x003e9958 61746368 3a200000 20767320 00000000 atch: .. vs ....\n- 0x003e9968 496e7465 726c6561 76656420 70616972 Interleaved pair\n- 0x003e9978 65642065 6e642066 696c6520 61707061 ed end file appa\n- 0x003e9988 72656e74 6c79206e 6f742063 6c65616e rently not clean\n- 0x003e9998 6c792069 6e746572 6c656176 65643a20 ly interleaved: \n- 0x003e99a8 6c617374 20726561 64200000 20646f65 last read .. doe\n- 0x003e99b8 73206e6f 74206861 76652061 20706172 s not have a par\n- 0x003e99c8 746e6572 2e000000 496e7465 726c6561 tner....Interlea\n- 0x003e99d8 76656420 70616972 65642065 6e642066 ved paired end f\n- 0x003e99e8 696c6520 61707061 72656e74 6c79206e ile apparently n\n- 0x003e99f8 6f742063 6c65616e 6c792069 6e746572 ot cleanly inter\n- 0x003e9a08 6c656176 65643a20 72656164 2074656d leaved: read tem\n- 0x003e9a18 706c6174 65200000 46696c65 2028626c plate ..File (bl\n- 0x003e9a28 61322920 6d6f7265 20726561 64732074 a2) more reads t\n- 0x003e9a38 68616e20 66696c65 2028626c 61293f3f han file (bla)??\n- 0x003e9a48 3f000000 4e35626f 6f737439 65786365 ?...N5boost9exce\n- 0x003e9a58 7074696f 6e450000 4e35626f 6f737431 ptionE..N5boost1\n- 0x003e9a68 36657863 65707469 6f6e5f64 65746169 6exception_detai\n- 0x003e9a78 6c313063 6c6f6e65 5f626173 65450000 l10clone_baseE..\n- 0x003e9a88 4e35626f 6f737436 73797374 656d3134 N5boost6system14\n- 0x003e9a98 6572726f 725f6361 7465676f 72794500 error_categoryE.\n- 0x003e9aa8 4e35626f 6f737436 73797374 656d3664 N5boost6system6d\n- 0x003e9ab8 65746169 6c323267 656e6572 69635f65 etail22generic_e\n- 0x003e9ac8 72726f72 5f636174 65676f72 79450000 rror_categoryE..\n- 0x003e9ad8 4e35626f 6f737436 73797374 656d3132 N5boost6system12\n- 0x003e9ae8 73797374 656d5f65 72726f72 45000000 system_errorE...\n- 0x003e9af8 4e35626f 6f737431 36746872 6561645f N5boost16thread_\n- 0x003e9b08 65786365 7074696f 6e450000 4e35626f exceptionE..N5bo\n- 0x003e9b18 6f737432 31746872 6561645f 7265736f ost21thread_reso\n- 0x003e9b28 75726365 5f657272 6f724500 4e35626f urce_errorE.N5bo\n- 0x003e9b38 6f737431 30777261 70657863 65707449 ost10wrapexceptI\n- 0x003e9b48 4e535f32 31746872 6561645f 7265736f NS_21thread_reso\n- 0x003e9b58 75726365 5f657272 6f724545 45000000 urce_errorEEE...\n- 0x003e9b68 652e6d61 66000000 48555a38 353a3234 e.maf...HUZ85:24\n- 0x003e9b78 31363a31 37363300 48555a38 353a3135 16:1763.HUZ85:15\n- 0x003e9b88 37383a31 30323400 2d2d6a6f 623d6465 78:1024.--job=de\n- 0x003e9b98 6e6f766f 2c67656e 6f6d652c 61636375 novo,genome,accu\n- 0x003e9ba8 72617465 2c696f6e 746f7200 52656620 rate,iontor.Ref \n- 0x003e9bb8 00000000 206e6f74 20696e20 72656164 .... not in read\n- 0x003e9bc8 706f6f6c 3f000000 64626752 65706c61 pool?...dbgRepla\n- 0x003e9bd8 794d6169 6e000000 4e657720 00000000 yMain...New ....\n- 0x003e9be8 6265666f 72650a00 72656164 20616464 before..read add\n- 0x003e9bf8 65640a0a 00000000 72656164 206e6f74 ed......read not\n- 0x003e9c08 20616464 65640a0a 00000000 62616420 added......bad \n- 0x003e9c18 6c657869 63616c20 63617374 3a20736f lexical cast: so\n- 0x003e9c28 75726365 20747970 65207661 6c756520 urce type value \n- 0x003e9c38 636f756c 64206e6f 74206265 20696e74 could not be int\n- 0x003e9c48 65727072 65746564 20617320 74617267 erpreted as targ\n- 0x003e9c58 65740000 2d2d6a6f 623d6765 6e6f6d65 et..--job=genome\n- 0x003e9c68 2c64656e 6f766f2c 61636375 72617465 ,denovo,accurate\n- 0x003e9c78 2c736f6c 65786100 6c6f6164 636c6970 ,solexa.loadclip\n- 0x003e9c88 3a200000 506f7374 2d6c6f61 6420636c : ..Post-load cl\n- 0x003e9c98 6970733a 0a000000 6d64636c 69705f74 ips:....mdclip_t\n- 0x003e9ca8 00000000 53454152 4348204d 53473a20 ....SEARCH MSG: \n- 0x003e9cb8 50686958 20313734 20666f75 6e643a20 PhiX 174 found: \n- 0x003e9cc8 00000000 434c4950 204d5347 3a204164 ....CLIP MSG: Ad\n- 0x003e9cd8 6170746f 72207269 67687420 666f756e aptor right foun\n- 0x003e9ce8 643a2000 434c4950 204d5347 3a205061 d: .CLIP MSG: Pa\n- 0x003e9cf8 72746961 6c206164 6170746f 72207269 rtial adaptor ri\n- 0x003e9d08 67687420 666f756e 643a2000 4c6f6164 ght found: .Load\n- 0x003e9d18 696e6720 64617461 20736574 20000000 ing data set ...\n- 0x003e9d28 20696e74 6f206d65 6d6f7279 3a0a0000 into memory:...\n- 0x003e9d38 0a446f6e 650a0000 436c6970 70696e67 .Done...Clipping\n- 0x003e9d48 20706f6f 6c200000 43616c63 756c6174 pool ..Calculat\n- 0x003e9d58 696e6720 68617368 20737461 74697374 ing hash statist\n- 0x003e9d68 69637320 666f7220 706f6f6c 20000000 ics for pool ...\n- 0x003e9d78 203a0a00 0a446f6e 650a5361 76696e67 :...Done.Saving\n- 0x003e9d88 202e2e2e 00000000 646f6e65 2e000000 .......done....\n- 0x003e9d98 68617368 20646973 74726962 20000000 hash distrib ...\n- 0x003e9da8 63726561 74696e67 20737562 68730000 creating subhs..\n- 0x003e9db8 0a232323 23232323 23200000 206e6f74 .######## .. not\n- 0x003e9dc8 20000000 686a3a6b 3a760000 0a417574 ...hj:k:v...Aut\n- 0x003e9dd8 686f723a 09094261 73746965 6e204368 hor:..Bastien Ch\n- 0x003e9de8 65767265 75782028 62616368 40636865 evreux (bach@che\n- 0x003e9df8 76726575 782e6f72 67290a50 7572706f vreux.org).Purpo\n- 0x003e9e08 73653a09 68616e64 6c65206b 2d6d6572 se:.handle k-mer\n- 0x003e9e18 20737461 74697374 69637320 6f662061 statistics of a\n- 0x003e9e28 20646174 61207365 740a0a00 55736167 data set...Usag\n- 0x003e9e38 653a0a6d 69726164 69666620 2e2e2e0a e:.miradiff ....\n- 0x003e9e48 00000000 6a6f6200 4e35626f 6f737431 ....job.N5boost1\n- 0x003e9e58 36626164 5f6c6578 6963616c 5f636173 6bad_lexical_cas\n- 0x003e9e68 74450000 4e35626f 6f737431 30777261 tE..N5boost10wra\n- 0x003e9e78 70657863 65707449 4e535f31 36626164 pexceptINS_16bad\n- 0x003e9e88 5f6c6578 6963616c 5f636173 74454545 _lexical_castEEE\n- 0x003e9e98 00000000 4d697373 696e6720 6e616d65 ....Missing name\n- 0x003e9ea8 206f6620 6174206c 65617374 206f6e65 of at least one\n- 0x003e9eb8 2066696c 652e0a00 55736167 653a2066 file...Usage: f\n- 0x003e9ec8 696c7465 72205b5b 6d696e66 77645d20 ilter [[minfwd] \n- 0x003e9ed8 6d696e72 65765d20 6d696e74 6f74616c minrev] mintotal\n- 0x003e9ee8 20696e20 6f75740a 00000000 6d657244 in out.....merD\n- 0x003e9ef8 656c7461 54657374 28292043 75727265 eltaTest() Curre\n- 0x003e9f08 6e746c79 2064652d 61637469 76617465 ntly de-activate\n- 0x003e9f18 642e0a00 4b6d6572 2073697a 65200000 d...Kmer size ..\n- 0x003e9f28 20776974 68200000 20627974 65732061 with .. bytes a\n- 0x003e9f38 7265206e 6f742065 78706563 74656420 re not expected \n- 0x003e9f48 68657265 2e0a0000 766f6964 204d6972 here....void Mir\n- 0x003e9f58 614d6572 3a3a6d65 7244756d 70486173 aMer::merDumpHas\n- 0x003e9f68 68537461 74732869 6e742061 7267632c hStats(int argc,\n- 0x003e9f78 20636861 72202a2a 20617267 76290000 char ** argv)..\n- 0x003e9f88 766f6964 204d6972 614d6572 3a3a6d65 void MiraMer::me\n- 0x003e9f98 7244756d 70446562 75672869 6e742061 rDumpDebug(int a\n- 0x003e9fa8 7267632c 20636861 72202a2a 20617267 rgc, char ** arg\n- 0x003e9fb8 76290000 766f6964 204d6972 614d6572 v)..void MiraMer\n- 0x003e9fc8 3a3a6d65 7244756d 70486173 68446973 ::merDumpHashDis\n- 0x003e9fd8 74726962 28696e74 20617267 632c2063 trib(int argc, c\n- 0x003e9fe8 68617220 2a2a2061 72677629 00000000 har ** argv)....\n- 0x003e9ff8 6d697261 6d65722e 6d68732e 677a0000 miramer.mhs.gz..\n- 0x003ea008 4d45525f 62617365 73706572 68617368 MER_basesperhash\n- 0x003ea018 20000000 766f6964 204d6972 614d6572 ...void MiraMer\n- 0x003ea028 3a3a6d65 72437265 61746548 61736853 ::merCreateHashS\n- 0x003ea038 74617473 28696e74 20617267 632c2063 tats(int argc, c\n- 0x003ea048 68617220 2a2a2061 72677629 00000000 har ** argv)....\n- 0x003ea058 46696c65 20000000 0a202046 696c6520 File .... File \n- 0x003ea068 666f726d 61742076 65727369 6f6e3a09 format version:.\n- 0x003ea078 00000000 0a20204b 6d657220 6c656e67 ..... Kmer leng\n- 0x003ea088 74683a09 00000000 0a20204b 6d657220 th:...... Kmer \n- 0x003ea098 62797465 733a0900 0a20204e 756d2e20 bytes:... Num. \n- 0x003ea0a8 6b6d6572 733a0900 0a202053 6f727420 kmers:... Sort \n- 0x003ea0b8 73746174 75733a09 00000000 206e6f74 status:..... not\n- 0x003ea0c8 20726561 6461626c 65206f72 206e6f74 readable or not\n- 0x003ea0d8 2061206d 68732066 696c652e 0a000000 a mhs file.....\n- 0x003ea0e8 4c6f6164 696e6720 6b6d6572 20737461 Loading kmer sta\n- 0x003ea0f8 74697374 6963732e 00000000 43616c63 tistics.....Calc\n- 0x003ea108 756c6174 69672066 6f726b73 2e000000 ulatig forks....\n- 0x003ea118 2e726177 00000000 2e62796c 656e0000 .raw.....bylen..\n- 0x003ea128 2e62796d 68630000 55736167 653a2064 .bymhc..Usage: d\n- 0x003ea138 62672069 6e206f75 740a0000 6c6f6164 bg in out...load\n- 0x003ea148 20000000 7472696d 20000000 5f6e6f74 ...trim ..._not\n- 0x003ea158 696e5f00 2e666173 74610000 53617669 in_..fasta..Savi\n- 0x003ea168 6e672068 61736865 7320746f 20464153 ng hashes to FAS\n- 0x003ea178 54412066 696c6520 00000000 53617669 TA file ....Savi\n- 0x003ea188 6e672068 61736865 7320746f 20746578 ng hashes to tex\n- 0x003ea198 74206669 6c652000 55736167 653a0a6d t file .Usage:.m\n- 0x003ea1a8 6972616d 6572202e 2e2e0a00 20202d6a iramer ..... -j\n- 0x003ea1b8 202f202d 2d6a6f62 09090909 4a6f6220 / --job....Job \n- 0x003ea1c8 74797065 2e204375 7272656e 746c793a type. Currently:\n- 0x003ea1d8 0a202020 20202020 20202020 20090909 . ...\n- 0x003ea1e8 09637265 61746520 28646566 61756c74 .create (default\n- 0x003ea1f8 290a2020 20202020 20202020 20200909 ). ..\n- 0x003ea208 0909696e 666f0a20 20202020 20202020 ..info. \n- 0x003ea218 20202009 09090973 6f72740a 20202020 ....sort. \n- 0x003ea228 20202020 20202020 09090909 64696666 ....diff\n- 0x003ea238 0a202020 20202020 20202020 20090909 . ...\n- 0x003ea248 0964756d 70636f75 6e74730a 20202020 .dumpcounts. \n- 0x003ea258 20202020 20202020 09090909 64656275 ....debu\n- 0x003ea268 670a2020 20202020 20202020 20200909 g. ..\n- 0x003ea278 09096474 6573740a 20202020 20202020 ..dtest. \n- 0x003ea288 20202020 09090909 64756d70 64697374 ....dumpdist\n- 0x003ea298 7269620a 20202d68 202f202d 2d68656c rib. -h / --hel\n- 0x003ea2a8 70090909 09507269 6e742073 686f7274 p....Print short\n- 0x003ea2b8 2068656c 7020616e 64206578 69740a20 help and exit. \n- 0x003ea2c8 202d7620 2f202d2d 76657273 696f6e09 -v / --version.\n- 0x003ea2d8 09095072 696e7420 76657273 696f6e20 ..Print version \n- 0x003ea2e8 616e6420 65786974 0a000000 536f7272 and exit....Sorr\n- 0x003ea2f8 792c202d 6b20666f 72206b6d 65722073 y, -k for kmer s\n- 0x003ea308 697a6520 6d757374 20626520 3c3d2032 ize must be <= 2\n- 0x003ea318 35362066 6f722074 68652074 696d6520 56 for the time \n- 0x003ea328 6265696e 672e0a00 64626700 64756d70 being...dbg.dump\n- 0x003ea338 636f756e 74730000 64756d70 64697374 counts..dumpdist\n- 0x003ea348 72696200 66696c74 65720000 696e666f rib.filter..info\n- 0x003ea358 00000000 736f7274 00000000 64656275 ....sort....debu\n- 0x003ea368 67000000 64746573 74000000 3a20756e g...dtest...: un\n- 0x003ea378 6b6e6f77 6e206a6f 62202700 273f3f3f known job '.'???\n- 0x003ea388 00000000 57686d4d 7276633a 743a2000 ....WhmMrvc:t: .\n- 0x003ea398 4d697373 696e6720 64697265 63746f72 Missing director\n- 0x003ea3a8 79206e61 6d652066 6f72206f 7074696f y name for optio\n- 0x003ea3b8 6e202d63 202f202d 2d637764 3d000000 n -c / --cwd=...\n- 0x003ea3c8 6d697261 7062636f 72726563 74090000 mirapbcorrect...\n- 0x003ea3d8 6d697261 09090000 4d495241 4c494220 mira....MIRALIB \n- 0x003ea3e8 76657273 696f6e20 00000000 0a417574 version .....Aut\n- 0x003ea3f8 686f723a 09094261 73746965 6e204368 hor:..Bastien Ch\n- 0x003ea408 65767265 75782028 62616368 40636865 evreux (bach@che\n- 0x003ea418 76726575 782e6f72 67290a00 50757270 vreux.org)..Purp\n- 0x003ea428 6f73653a 09636f72 72656374 206c6f77 ose:.correct low\n- 0x003ea438 20717561 6c697479 20506163 42696f20 quality PacBio \n- 0x003ea448 73657175 656e6369 6e672064 6174612e sequencing data.\n- 0x003ea458 0a0a0000 50757270 6f73653a 09617373 ....Purpose:.ass\n- 0x003ea468 656d626c 65207365 7175656e 63696e67 emble sequencing\n- 0x003ea478 20646174 612e0a0a 00000000 55736167 data.......Usag\n- 0x003ea488 653a0a00 205b6f70 74696f6e 735d206d e:.. [options] m\n- 0x003ea498 616e6966 6573745f 66696c65 205b6d61 anifest_file [ma\n- 0x003ea4a8 6e696665 73745f66 696c6520 2e2e2e5d nifest_file ...]\n- 0x003ea4b8 0a000000 20202d63 202f202d 2d637764 .... -c / --cwd\n- 0x003ea4c8 3d090964 69726563 746f7279 09436861 =..directory.Cha\n- 0x003ea4d8 6e676520 776f726b 696e6720 64697265 nge working dire\n- 0x003ea4e8 63746f72 790a0000 20202d6d 202f202d ctory... -m / -\n- 0x003ea4f8 2d6d6368 65636b09 0909094f 6e6c7920 -mcheck....Only \n- 0x003ea508 63686563 6b207468 65206d61 6e696665 check the manife\n- 0x003ea518 73742066 696c652c 20746865 6e206578 st file, then ex\n- 0x003ea528 69742e0a 20202d4d 202f202d 2d6d6463 it.. -M / --mdc\n- 0x003ea538 6865636b 0909094c 696b6520 2d6d2c20 heck...Like -m, \n- 0x003ea548 62757420 616c736f 20636865 636b2065 but also check e\n- 0x003ea558 78697374 656e6365 206f660a 09090909 xistence of.....\n- 0x003ea568 09206461 74612066 696c6573 2e0a2020 . data files.. \n- 0x003ea578 2d72202f 202d2d72 6573756d 65090909 -r / --resume...\n- 0x003ea588 09526573 756d6520 616e2069 6e746572 .Resume an inter\n- 0x003ea598 72757074 65642061 7373656d 626c790a rupted assembly.\n- 0x003ea5a8 00000000 20202d68 202f202d 2d68656c .... -h / --hel\n- 0x003ea5b8 70090909 09507269 6e742073 686f7274 p....Print short\n- 0x003ea5c8 2068656c 7020616e 64206578 69740a20 help and exit. \n- 0x003ea5d8 202d6d20 2f202d2d 6d636865 636b0909 -m / --mcheck..\n- 0x003ea5e8 09094f6e 6c792063 6865636b 20746865 ..Only check the\n- 0x003ea5f8 206d616e 69666573 74206669 6c652c20 manifest file, \n- 0x003ea608 7468656e 20657869 742e0a20 202d4d20 then exit.. -M \n- 0x003ea618 2f202d2d 6d646368 65636b09 09094c69 / --mdcheck...Li\n- 0x003ea628 6b65202d 6d2c2062 75742061 6c736f20 ke -m, but also \n- 0x003ea638 63686563 6b206578 69737465 6e636520 check existence \n- 0x003ea648 6f660a09 09090909 20646174 61206669 of...... data fi\n- 0x003ea658 6c65732e 0a20202d 72202f20 2d2d7265 les.. -r / --re\n- 0x003ea668 73756d65 09090909 52657375 6d652f72 sume....Resume/r\n- 0x003ea678 65737461 72742061 6e20696e 74657272 estart an interr\n- 0x003ea688 75707465 64206173 73656d62 6c790a20 upted assembly. \n- 0x003ea698 202d7420 2f202d2d 74687265 6164733d -t / --threads=\n- 0x003ea6a8 09696e74 65676572 0909466f 72636520 .integer..Force \n- 0x003ea6b8 6e756d62 6572206f 66207468 72656164 number of thread\n- 0x003ea6c8 7320286f 76657272 69646573 0a090909 s (overrides....\n- 0x003ea6d8 09092065 71756976 616c656e 74202d47 .. equivalent -G\n- 0x003ea6e8 453a6e6f 74206d61 6e696665 73742065 E:not manifest e\n- 0x003ea6f8 6e747279 290a2020 2d76202f 202d2d76 ntry). -v / --v\n- 0x003ea708 65727369 6f6e0909 09507269 6e742076 ersion...Print v\n- 0x003ea718 65727369 6f6e2061 6e642065 7869740a ersion and exit.\n- 0x003ea728 00000000 4974206c 6f6f6b73 206c696b ....It looks lik\n- 0x003ea738 6520796f 75206172 65207573 696e6720 e you are using \n- 0x003ea748 74686520 6f6c6420 636f6d6d 616e6420 the old command \n- 0x003ea758 6c696e65 20666f72 6d617420 6f66204d line format of M\n- 0x003ea768 49524120 332e342e 7820616e 64206561 IRA 3.4.x and ea\n- 0x003ea778 726c6965 722e0a50 6c656173 65206c6f rlier..Please lo\n- 0x003ea788 6f6b2075 7020696e 20746865 206d616e ok up in the man\n- 0x003ea798 75616c20 6f6e2068 6f772074 6f207573 ual on how to us\n- 0x003ea7a8 65206d61 6e696665 73742066 696c6573 e manifest files\n- 0x003ea7b8 20666f72 204d4952 4120332e 392e7820 for MIRA 3.9.x \n- 0x003ea7c8 616e6420 6c617465 722e0a00 596f7520 and later...You \n- 0x003ea7d8 64696420 6e6f7420 73706563 69667920 did not specify \n- 0x003ea7e8 61206d61 6e696665 73742066 696c6520 a manifest file \n- 0x003ea7f8 746f206c 6f61643f 0a000000 54686973 to load?....This\n- 0x003ea808 20697320 4d495241 20000000 506c6561 is MIRA ...Plea\n- 0x003ea818 73652063 6974653a 20436865 76726575 se cite: Chevreu\n- 0x003ea828 782c2042 2e2c2057 65747465 722c2054 x, B., Wetter, T\n- 0x003ea838 2e20616e 64205375 6861692c 20532e20 . and Suhai, S. \n- 0x003ea848 28313939 39292c20 47656e6f 6d652053 (1999), Genome S\n- 0x003ea858 65717565 6e63650a 41737365 6d626c79 equence.Assembly\n- 0x003ea868 20557369 6e672054 72616365 20536967 Using Trace Sig\n- 0x003ea878 6e616c73 20616e64 20416464 6974696f nals and Additio\n- 0x003ea888 6e616c20 53657175 656e6365 20496e66 nal Sequence Inf\n- 0x003ea898 6f726d61 74696f6e 2e0a436f 6d707574 ormation..Comput\n- 0x003ea8a8 65722053 6369656e 63652061 6e642042 er Science and B\n- 0x003ea8b8 696f6c6f 67793a20 50726f63 65656469 iology: Proceedi\n- 0x003ea8c8 6e677320 6f662074 68652047 65726d61 ngs of the Germa\n- 0x003ea8d8 6e20436f 6e666572 656e6365 206f6e0a n Conference on.\n- 0x003ea8e8 42696f69 6e666f72 6d617469 63732028 Bioinformatics (\n- 0x003ea8f8 47434229 2039392c 2070702e 2034352d GCB) 99, pp. 45-\n- 0x003ea908 35362e0a 0a000000 4368616e 67696e67 56......Changing\n- 0x003ea918 20776f72 6b696e67 20646972 6563746f working directo\n- 0x003ea928 72792074 6f202700 27206661 696c6564 ry to '.' failed\n- 0x003ea938 2c207379 7374656d 206d6573 73616765 , system message\n- 0x003ea948 2069733a 20000000 0a4d616e 69666573 is: ....Manifes\n- 0x003ea958 74206c6f 6f6b7320 4f4b0000 20616e64 t looks OK.. and\n- 0x003ea968 20746865 20646174 61206669 6c657320 the data files \n- 0x003ea978 72656665 72656e63 65642077 69746869 referenced withi\n- 0x003ea988 6e207765 72652066 6f756e64 00000000 n were found....\n- 0x003ea998 42696e61 72793a20 00000000 4f6f6f6f Binary: ....Oooo\n- 0x003ea9a8 6f6f7073 3f20596f 75206361 6c6c6564 oops? You called\n- 0x003ea9b8 20746865 20276d69 72612720 65786563 the 'mira' exec\n- 0x003ea9c8 75746162 6c652062 75742068 61766520 utable but have \n- 0x003ea9d8 70617261 6d657465 72732073 65742066 parameters set f\n- 0x003ea9e8 6f722074 68654553 542d534e 502d5365 or theEST-SNP-Se\n- 0x003ea9f8 61726368 20706970 656c696e 65207365 arch pipeline se\n- 0x003eaa08 742e2046 6f722074 6869732c 20796f75 t. For this, you\n- 0x003eaa18 20686176 6520746f 20757365 20746865 have to use the\n- 0x003eaa28 20276d69 72615365 61726368 45535453 'miraSearchESTS\n- 0x003eaa38 4e507327 65786563 75746162 6c652028 NPs'executable (\n- 0x003eaa48 736f7272 79292e00 766f6964 206d6972 sorry)..void mir\n- 0x003eaa58 6128696e 74206172 67632c20 63686172 a(int argc, char\n- 0x003eaa68 202a2a20 61726776 29000000 0a506172 ** argv)....Par\n- 0x003eaa78 616d6574 65727320 70617273 65642077 ameters parsed w\n- 0x003eaa88 6974686f 75742065 72726f72 2c207065 ithout error, pe\n- 0x003eaa98 72666563 742e0a00 4f766572 72696469 rfect...Overridi\n- 0x003eaaa8 6e67206e 756d6265 72206f66 20746872 ng number of thr\n- 0x003eaab8 65616473 20766961 20272d74 27207769 eads via '-t' wi\n- 0x003eaac8 74682000 0a0a456e 64206f66 20617373 th ...End of ass\n- 0x003eaad8 656d626c 79207072 6f636573 732c2074 embly process, t\n- 0x003eaae8 68616e6b 20796f75 20666f72 20757369 hank you for usi\n- 0x003eaaf8 6e67204d 4952412e 00000000 4f756368 ng MIRA.....Ouch\n- 0x003eab08 2c206f75 74206f66 206d656d 6f727920 , out of memory \n- 0x003eab18 64657465 63746564 2e0a0000 2f6d6972 detected..../mir\n- 0x003eab28 61636f6e 76657274 00000000 202d7620 aconvert.... -v \n- 0x003eab38 3e2f6465 762f6e75 6c6c2032 3e263100 >/dev/null 2>&1.\n- 0x003eab48 2f000000 202d7420 68746d6c 00000000 /... -t html....\n- 0x003eab58 202d7420 74787400 202d7420 63616600 -t txt. -t caf.\n- 0x003eab68 202d7420 6d616600 202d7420 74637300 -t maf. -t tcs.\n- 0x003eab78 202d7420 61636500 202d7420 67666633 -t ace. -t gff3\n- 0x003eab88 00000000 202d7420 77696700 202d7420 .... -t wig. -t \n- 0x003eab98 66617374 61000000 202d7420 65787000 fasta... -t exp.\n- 0x003eaba8 2e2e2f00 5f645f69 6e666f2f 00000000 ../._d_info/....\n- 0x003eabb8 202d5020 222d2d6a 6f623d00 5c220000 -P \"--job=.\\\"..\n- 0x003eabc8 22200000 5f4c6172 6765436f 6e746967 \" .._LargeContig\n- 0x003eabd8 735f6f75 74000000 2f657874 72616374 s_out.../extract\n- 0x003eabe8 4c617267 65436f6e 74696773 2e736800 LargeContigs.sh.\n- 0x003eabf8 23212f62 696e2f73 680a0a65 63686f0a #!/bin/sh..echo.\n- 0x003eac08 6563686f 20546869 73206973 20686f77 echo This is how\n- 0x003eac18 204d4952 41206578 74726163 74656420 MIRA extracted \n- 0x003eac28 276c6172 67652063 6f6e7469 67732720 'large contigs' \n- 0x003eac38 66726f6d 20746865 20746f74 616c2061 from the total a\n- 0x003eac48 7373656d 626c7920 666f7220 796f753a ssembly for you:\n- 0x003eac58 0a656368 6f202069 74206d61 64652061 .echo it made a\n- 0x003eac68 206c6973 74206f66 20636f6e 74696773 list of contigs\n- 0x003eac78 205c2873 65652069 6e666f20 66696c65 \\(see info file\n- 0x003eac88 20000000 5c290a65 63686f20 20776869 ...\\).echo whi\n- 0x003eac98 63682072 65616368 65642061 20636572 ch reached a cer\n- 0x003eaca8 7461696e 206c656e 67746820 5c287573 tain length \\(us\n- 0x003eacb8 75616c6c 79203530 302c2073 6565202d ually 500, see -\n- 0x003eacc8 4d493a6c 63733d2e 2e2e5c29 20616e64 MI:lcs=...\\) and\n- 0x003eacd8 20686164 20617420 6c656173 7420312f had at least 1/\n- 0x003eace8 33206f66 0a656368 6f202074 68652061 3 of.echo the a\n- 0x003eacf8 76657261 67652063 6f766572 61676520 verage coverage \n- 0x003ead08 5c287065 72207365 7175656e 63696e67 \\(per sequencing\n- 0x003ead18 20746563 686e6f6c 6f67795c 292e0a65 technology\\)..e\n- 0x003ead28 63686f0a 6563686f 204e6f74 65207468 cho.echo Note th\n- 0x003ead38 61742079 6f752063 616e2072 65646566 at you can redef\n- 0x003ead48 696e6520 77686174 206c6172 67652063 ine what large c\n- 0x003ead58 6f6e7469 67732061 72652066 6f722079 ontigs are for y\n- 0x003ead68 6f752062 79207369 6d706c79 20757369 ou by simply usi\n- 0x003ead78 6e672061 6e790a65 63686f20 636f6d62 ng any.echo comb\n- 0x003ead88 696e6174 696f6e20 6f66202d 6e2c202d ination of -n, -\n- 0x003ead98 782c202d 7920616e 64202d7a 20706172 x, -y and -z par\n- 0x003eada8 616d6574 65727320 6f662027 6d697261 ameters of 'mira\n- 0x003eadb8 636f6e76 65727427 20696e73 74656164 convert' instead\n- 0x003eadc8 206f6620 6f6e6c79 20746865 0a656368 of only the.ech\n- 0x003eadd8 6f20272d 6e272070 6172616d 65746572 o '-n' parameter\n- 0x003eade8 20617320 75736564 20696e20 74686973 as used in this\n- 0x003eadf8 20657861 6d706c65 2e0a6563 686f0a65 example..echo.e\n- 0x003eae08 63686f20 596f7520 63616e20 666f6c6c cho You can foll\n- 0x003eae18 6f772074 68652070 726f6772 65737320 ow the progress \n- 0x003eae28 6f662074 68652063 6f6e7665 7273696f of the conversio\n- 0x003eae38 6e20696e 20746865 2066696c 65202265 n in the file \"e\n- 0x003eae48 632e6c6f 67220a65 63686f0a 0a6d6972 c.log\".echo..mir\n- 0x003eae58 61636f6e 76657274 20000000 203e6563 aconvert ... >ec\n- 0x003eae68 2e6c6f67 20323e26 310a0a69 66205b20 .log 2>&1..if [ \n- 0x003eae78 243f202d 65712030 205d3b74 68656e0a $? -eq 0 ];then.\n- 0x003eae88 20202072 6d206563 2e6c6f67 0a202020 rm ec.log. \n- 0x003eae98 6563686f 2046696e 69736865 642c2061 echo Finished, a\n- 0x003eaea8 6c6c2064 6f6e652e 0a656c73 650a2020 ll done..else. \n- 0x003eaeb8 20746169 6c202d35 30206563 2e6c6f67 tail -50 ec.log\n- 0x003eaec8 0a202020 6563686f 0a202020 6563686f . echo. echo\n- 0x003eaed8 204f6f6f 70732c20 736f6d65 7468696e Ooops, somethin\n- 0x003eaee8 67207765 6e742077 726f6e67 2e20506c g went wrong. Pl\n- 0x003eaef8 65617365 20636f6e 73756c74 20746865 ease consult the\n- 0x003eaf08 2066696c 65202765 632d6c6f 67272069 file 'ec-log' i\n- 0x003eaf18 6e207468 69732064 69726563 746f7279 n this directory\n- 0x003eaf28 2e0a6669 00000000 436f756c 64206e6f ..fi....Could no\n- 0x003eaf38 74206669 6e642065 78656375 7461626c t find executabl\n- 0x003eaf48 6520276d 69726163 6f6e7665 72742720 e 'miraconvert' \n- 0x003eaf58 666f7220 65787472 61637469 6e67206c for extracting l\n- 0x003eaf68 61726765 20636f6e 74696773 3f0a0000 arge contigs?...\n- 0x003eaf78 53746172 74696e67 20657874 72616374 Starting extract\n- 0x003eaf88 696f6e20 6f66206c 61726765 20636f6e ion of large con\n- 0x003eaf98 74696773 206e6f77 20287468 6973206d tigs now (this m\n- 0x003eafa8 61792074 616b6520 61207768 696c652c ay take a while,\n- 0x003eafb8 20706c65 61736520 62652070 61746965 please be patie\n- 0x003eafc8 6e74292e 00000000 203e6563 2e6c6f67 nt)..... >ec.log\n- 0x003eafd8 20323e26 31000000 0a457874 72616374 2>&1....Extract\n- 0x003eafe8 696f6e20 6661696c 65642c20 706c6561 ion failed, plea\n- 0x003eaff8 73652063 6f6e7375 6c742000 2f65632e se consult ./ec.\n- 0x003eb008 6c6f670a 666f7220 6d6f7265 20696e66 log.for more inf\n- 0x003eb018 6f726d61 74696f6e 206f6e20 7768792e ormation on why.\n- 0x003eb028 0a000000 0a446f6e 652e0a00 65632e6c .....Done...ec.l\n- 0x003eb038 6f670000 4c617267 6520636f 6e746967 og..Large contig\n- 0x003eb048 7320636f 756c6420 6e6f7420 62652065 s could not be e\n- 0x003eb058 78747261 63746564 2c20736f 7272792e xtracted, sorry.\n- 0x003eb068 0a0a444f 4e275420 50414e49 43212049 ..DON'T PANIC! I\n- 0x003eb078 6e207468 65206469 72656374 6f72790a n the directory.\n- 0x003eb088 20202020 27000000 270a796f 75207769 '...'.you wi\n- 0x003eb098 6c6c2066 696e6420 61207363 72697074 ll find a script\n- 0x003eb0a8 2063616c 6c656420 20202765 78747261 called 'extra\n- 0x003eb0b8 63744c61 72676543 6f6e7469 67732e73 ctLargeContigs.s\n- 0x003eb0c8 68270a77 68696368 2073686f 77732079 h'.which shows y\n- 0x003eb0d8 6f752068 6f772074 6f206578 74726163 ou how to extrac\n- 0x003eb0e8 74206c61 72676520 636f6e74 69677320 t large contigs \n- 0x003eb0f8 66726f6d 20796f75 72206173 73656d62 from your assemb\n- 0x003eb108 6c792e20 45697468 65727265 61642069 ly. Eitherread i\n- 0x003eb118 7420746f 20756e64 65727374 616e6420 t to understand \n- 0x003eb128 686f7720 69742773 20646f6e 65206f72 how it's done or\n- 0x003eb138 202e2e2e 206a7573 74207275 6e206974 ... just run it\n- 0x003eb148 203a2d29 0a000000 2e2e2f2e 2e000000 :-)....../.....\n- 0x003eb158 2f5f746d 70726563 72656174 65000000 /_tmprecreate...\n- 0x003eb168 2e636166 00000000 436f756c 64206e6f .caf....Could no\n- 0x003eb178 74206669 6e642065 78656375 7461626c t find executabl\n- 0x003eb188 6520276d 69726163 6f6e7665 72742720 e 'miraconvert' \n- 0x003eb198 666f7220 72652d63 72656174 696e6720 for re-creating \n- 0x003eb1a8 43414620 72657375 6c747320 66696c65 CAF results file\n- 0x003eb1b8 3f0a0000 53746172 74696e67 20726563 ?...Starting rec\n- 0x003eb1c8 72656174 696e6720 43414620 72657375 reating CAF resu\n- 0x003eb1d8 6c747320 66696c65 2028706c 65617365 lts file (please\n- 0x003eb1e8 20626520 70617469 656e7429 2e000000 be patient)....\n- 0x003eb1f8 203e7263 2e6c6f67 20323e26 31000000 >rc.log 2>&1...\n- 0x003eb208 0a4f6f6f 6f70732c 20746861 74206661 .Oooops, that fa\n- 0x003eb218 696c6564 2c20706c 65617365 20636f6e iled, please con\n- 0x003eb228 73756c74 20000000 2f72632e 6c6f670a sult .../rc.log.\n- 0x003eb238 666f7220 6d6f7265 20696e66 6f726d61 for more informa\n- 0x003eb248 74696f6e 206f6e20 7768792e 0a000000 tion on why.....\n- 0x003eb258 72632e6c 6f670000 202d5700 4f6f6f6f rc.log.. -W.Oooo\n- 0x003eb268 6f70733f 20536f6d 65686f77 20666169 ops? Somehow fai\n- 0x003eb278 6c656420 746f206c 61756e63 683a2000 led to launch: .\n- 0x003eb288 5573696e 67207265 73637565 20617373 Using rescue ass\n- 0x003eb298 656d626c 79206d6f 64652c20 62757420 embly mode, but \n- 0x003eb2a8 65787472 61637469 6f6e206f 66206c61 extraction of la\n- 0x003eb2b8 72676520 636f6e74 69677320 77696c6c rge contigs will\n- 0x003eb2c8 206e6f74 20626520 646f6e65 20617574 not be done aut\n- 0x003eb2d8 6f6d6174 6963616c 6c792e0a 00000000 omatically......\n- 0x003eb2e8 0a536565 6e207369 676e616c 3a200000 .Seen signal: ..\n- 0x003eb2f8 57726170 70656420 4d495241 2070726f Wrapped MIRA pro\n- 0x003eb308 63657373 20776173 20746572 6d696e61 cess was termina\n- 0x003eb318 74656420 62792061 20736967 6e616c2e ted by a signal.\n- 0x003eb328 20435452 4c2d4320 6d617920 68617665 CTRL-C may have\n- 0x003eb338 20626565 6e206120 63617573 652e0000 been a cause...\n- 0x003eb348 4d495241 2073746f 70706564 20647565 MIRA stopped due\n- 0x003eb358 20746f20 616e2065 78746572 6e616c20 to an external \n- 0x003eb368 7369676e 616c0000 766f6964 206d6972 signal..void mir\n- 0x003eb378 614d6169 6e5f6c61 756e6368 57726170 aMain_launchWrap\n- 0x003eb388 70656428 696e7420 61726763 2c206368 ped(int argc, ch\n- 0x003eb398 6172202a 2a206172 67762900 57726170 ar ** argv).Wrap\n- 0x003eb3a8 70656420 4d495241 2070726f 63657373 ped MIRA process\n- 0x003eb3b8 20746572 6d696e61 74656420 77697468 terminated with\n- 0x003eb3c8 6f757420 6e6f726d 616c2065 7869742e out normal exit.\n- 0x003eb3d8 204d6179 62652069 74206861 73206265 Maybe it has be\n- 0x003eb3e8 656e206b 696c6c65 64206279 20746865 en killed by the\n- 0x003eb3f8 204f5320 28626563 61757365 206f6620 OS (because of \n- 0x003eb408 72756e74 696d6520 6f72206d 656d6f72 runtime or memor\n- 0x003eb418 79207573 61676529 206f7220 62792061 y usage) or by a\n- 0x003eb428 20757365 72207769 74682073 75666669 user with suffi\n- 0x003eb438 6369656e 74207072 6976696c 65676573 cient privileges\n- 0x003eb448 2e000000 4d495241 2070726f 6261626c ....MIRA probabl\n- 0x003eb458 7920676f 74206b69 6c6c6564 203a2d28 y got killed :-(\n- 0x003eb468 00000000 57726170 70656420 4d495241 ....Wrapped MIRA\n- 0x003eb478 2070726f 63657373 20657869 74656420 process exited \n- 0x003eb488 77697468 20616e20 6572726f 722e0a00 with an error...\n- 0x003eb498 0a0a5765 27726520 646f6e65 20686572 ..We're done her\n- 0x003eb4a8 652c2074 68616e6b 20796f75 20666f72 e, thank you for\n- 0x003eb4b8 20757369 6e67204d 4952412e 00000000 using MIRA.....\n- 0x003eb4c8 72657375 6d650000 6d636865 636b0000 resume..mcheck..\n- 0x003eb4d8 6d646368 65636b00 63776400 74687265 mdcheck.cwd.thre\n- 0x003eb4e8 61647300 6e6f7772 61700000 6d697261 ads.nowrap..mira\n- 0x003eb4f8 636f6e76 65727409 284d4952 414c4942 convert.(MIRALIB\n- 0x003eb508 20766572 73696f6e 20000000 290a4175 version ...).Au\n- 0x003eb518 74686f72 3a202042 61737469 656e2043 thor: Bastien C\n- 0x003eb528 68657672 65757809 28626163 68406368 hevreux.(bach@ch\n- 0x003eb538 65767265 75782e6f 7267290a 50757270 evreux.org).Purp\n- 0x003eb548 6f73653a 20636f6e 76657274 20617373 ose: convert ass\n- 0x003eb558 656d626c 7920616e 64207365 7175656e embly and sequen\n- 0x003eb568 63696e67 2066696c 65207479 7065732e cing file types.\n- 0x003eb578 0a0a0000 55736167 653a0a6d 69726163 ....Usage:.mirac\n- 0x003eb588 6f6e7665 7274205b 2d66203c 66726f6d onvert [-f ] [-t [-t \n- 0x003eb5b8 202e2e2e 5d5d0a09 5b2d6141 4368696d ...]]..[-aAChim\n- 0x003eb5c8 4d73755a 5d0a095b 2d63666c 6e4e6f50 MsuZ]..[-cflnNoP\n- 0x003eb5d8 71727476 78587959 7a207b2e 2e2e7d5d qrtvxXyYz {...}]\n- 0x003eb5e8 0a097b69 6e66696c 657d207b 6f757466 ..{infile} {outf\n- 0x003eb5f8 696c657d 205b3c74 6f747970 653e203c ile} [ <\n- 0x003eb608 746f7479 70653e20 2e2e2e5d 0a0a0000 totype> ...]....\n- 0x003eb618 4f707469 6f6e733a 0a000000 092d6620 Options:.....-f \n- 0x003eb628 3c66726f 6d747970 653e096c 6f616420 .load \n- 0x003eb638 74686973 20747970 65206f66 2070726f this type of pro\n- 0x003eb648 6a656374 2066696c 65732c20 77686572 ject files, wher\n- 0x003eb658 65206672 6f6d7479 70652069 733a0a09 e fromtype is:..\n- 0x003eb668 20202063 61660909 20612063 6f6d706c caf.. a compl\n- 0x003eb678 65746520 61737365 6d626c79 206f7220 ete assembly or \n- 0x003eb688 73696e67 6c652073 65717565 6e636573 single sequences\n- 0x003eb698 2066726f 6d204341 460a0920 20206d61 from CAF.. ma\n- 0x003eb6a8 66090920 6120636f 6d706c65 74652061 f.. a complete a\n- 0x003eb6b8 7373656d 626c7920 6f722073 696e676c ssembly or singl\n- 0x003eb6c8 65207365 7175656e 63657320 66726f6d e sequences from\n- 0x003eb6d8 20434146 0a092020 20666173 74610920 CAF.. fasta. \n- 0x003eb6e8 73657175 656e6365 73206672 6f6d2061 sequences from a\n- 0x003eb6f8 20464153 54412066 696c650a 09202020 FASTA file.. \n- 0x003eb708 66617374 71092073 65717565 6e636573 fastq. sequences\n- 0x003eb718 2066726f 6d206120 46415354 51206669 from a FASTQ fi\n- 0x003eb728 6c650a09 20202067 625b667c 6b7c6666 le.. gb[f|k|ff\n- 0x003eb738 5d092073 65717565 6e636573 2066726f ]. sequences fro\n- 0x003eb748 6d206120 47656e42 616e6b20 66696c65 m a GenBank file\n- 0x003eb758 0a092020 20706864 09092073 65717565 .. phd.. seque\n- 0x003eb768 6e636573 2066726f 6d206120 50484420 nces from a PHD \n- 0x003eb778 66696c65 0a092020 20666f66 6e657870 file.. fofnexp\n- 0x003eb788 09207365 7175656e 63657320 696e2045 . sequences in E\n- 0x003eb798 58502066 696c6573 2066726f 6d206669 XP files from fi\n- 0x003eb7a8 6c65206f 66206669 6c656e61 6d65730a le of filenames.\n- 0x003eb7b8 00000000 092d7420 3c746f74 7970653e .....-t \n- 0x003eb7c8 09777269 74652074 68652073 65717565 .write the seque\n- 0x003eb7d8 6e636573 2f617373 656d626c 7920746f nces/assembly to\n- 0x003eb7e8 20746869 73207479 70652028 6d756c74 this type (mult\n- 0x003eb7f8 69706c65 0a090909 6d656e74 696f6e73 iple....mentions\n- 0x003eb808 206f6620 2d742061 72652061 6c6c6f77 of -t are allow\n- 0x003eb818 6564293a 0a092020 20616365 09092073 ed):.. ace.. s\n- 0x003eb828 65717565 6e636573 206f7220 636f6d70 equences or comp\n- 0x003eb838 6c657465 20617373 656d626c 7920746f lete assembly to\n- 0x003eb848 20414345 0a092020 20636166 09092073 ACE.. caf.. s\n- 0x003eb858 65717565 6e636573 206f7220 636f6d70 equences or comp\n- 0x003eb868 6c657465 20617373 656d626c 7920746f lete assembly to\n- 0x003eb878 20434146 0a092020 206d6166 09092073 CAF.. maf.. s\n- 0x003eb888 65717565 6e636573 206f7220 636f6d70 equences or comp\n- 0x003eb898 6c657465 20617373 656d626c 7920746f lete assembly to\n- 0x003eb8a8 204d4146 0a092020 2073616d 09092063 MAF.. sam.. c\n- 0x003eb8b8 6f6d706c 65746520 61737365 6d626c79 omplete assembly\n- 0x003eb8c8 20746f20 53414d0a 09202020 73616d6e to SAM.. samn\n- 0x003eb8d8 62620920 6c696b65 2061626f 76652c20 bb. like above, \n- 0x003eb8e8 62757420 6c656176 696e6720 6f757420 but leaving out \n- 0x003eb8f8 72656665 72656e63 65202862 61636b62 reference (backb\n- 0x003eb908 6f6e6573 2920696e 0a090909 20206d61 ones) in.... ma\n- 0x003eb918 7070696e 67206173 73656d62 6c696573 pping assemblies\n- 0x003eb928 0a092020 2067625b 667c6b7c 66665d09 .. gb[f|k|ff].\n- 0x003eb938 20736571 75656e63 6573206f 7220636f sequences or co\n- 0x003eb948 6e73656e 73757320 746f2047 656e4261 nsensus to GenBa\n- 0x003eb958 6e6b0a09 20202067 66663309 0920636f nk.. gff3.. co\n- 0x003eb968 6e73656e 73757320 746f2047 4646330a nsensus to GFF3.\n- 0x003eb978 09202020 77696709 09206173 73656d62 . wig.. assemb\n- 0x003eb988 6c792063 6f766572 61676520 696e666f ly coverage info\n- 0x003eb998 20746f20 77696767 6c652066 696c650a to wiggle file.\n- 0x003eb9a8 09202020 67637769 67092061 7373656d . gcwig. assem\n- 0x003eb9b8 626c7920 67632063 6f6e7465 6e742069 bly gc content i\n- 0x003eb9c8 6e666f20 746f2077 6967676c 65206669 nfo to wiggle fi\n- 0x003eb9d8 6c650a09 20202066 61737461 09207365 le.. fasta. se\n- 0x003eb9e8 7175656e 63657320 6f722063 6f6e7365 quences or conse\n- 0x003eb9f8 6e737573 20746f20 46415354 41206669 nsus to FASTA fi\n- 0x003eba08 6c652028 7175616c 69746965 7320746f le (qualities to\n- 0x003eba18 0a090909 20202e71 75616c29 0a092020 .... .qual).. \n- 0x003eba28 20666173 74710920 73657175 656e6365 fastq. sequence\n- 0x003eba38 73206f72 20636f6e 73656e73 75732074 s or consensus t\n- 0x003eba48 6f204641 53545120 66696c65 0a092020 o FASTQ file.. \n- 0x003eba58 20657870 09092073 65717565 6e636573 exp.. sequences\n- 0x003eba68 206f7220 636f6d70 6c657465 20617373 or complete ass\n- 0x003eba78 656d626c 7920746f 20455850 2066696c embly to EXP fil\n- 0x003eba88 65732069 6e0a0909 09202064 69726563 es in.... direc\n- 0x003eba98 746f7269 65732e20 436f6d70 6c657465 tories. Complete\n- 0x003ebaa8 20617373 656d626c 69657320 61726520 assemblies are \n- 0x003ebab8 73756974 65642066 6f722067 6170340a suited for gap4.\n- 0x003ebac8 09090920 20696d70 6f727420 61732064 ... import as d\n- 0x003ebad8 69726563 74656420 61737365 6d626c79 irected assembly\n- 0x003ebae8 2e0a0909 0920204e 6f74653a 20757369 ..... Note: usi\n- 0x003ebaf8 6e672063 61663267 61702074 6f20696d ng caf2gap to im\n- 0x003ebb08 706f7274 20696e74 6f206761 70342069 port into gap4 i\n- 0x003ebb18 73207265 636f6d6d 656e6465 640a0909 s recommended...\n- 0x003ebb28 09202074 686f7567 680a0920 20207465 . though.. te\n- 0x003ebb38 78740909 20636f6d 706c6574 65206173 xt.. complete as\n- 0x003ebb48 73656d62 6c792074 6f207465 78742061 sembly to text a\n- 0x003ebb58 6c69676e 6d656e74 20286f6e 6c792077 lignment (only w\n- 0x003ebb68 68656e20 2d662069 730a0909 09202063 hen -f is.... c\n- 0x003ebb78 61662c20 6d616620 6f722067 6266290a af, maf or gbf).\n- 0x003ebb88 09202020 68746d6c 09092063 6f6d706c . html.. compl\n- 0x003ebb98 65746520 61737365 6d626c79 20746f20 ete assembly to \n- 0x003ebba8 48544d4c 20286f6e 6c792077 68656e20 HTML (only when \n- 0x003ebbb8 2d662069 73206361 662c206d 6166206f -f is caf, maf o\n- 0x003ebbc8 720a0909 09202067 6266290a 09202020 r.... gbf).. \n- 0x003ebbd8 74637309 0920636f 6d706c65 74652061 tcs.. complete a\n- 0x003ebbe8 7373656d 626c7920 746f2074 63730a09 ssembly to tcs..\n- 0x003ebbf8 20202068 736e7009 09207375 72726f75 hsnp.. surrou\n- 0x003ebc08 6e64696e 67206f66 20534e50 20746167 nding of SNP tag\n- 0x003ebc18 73202853 524f632c 2053414f 632c2053 s (SROc, SAOc, S\n- 0x003ebc28 494f6329 20746f20 48544d4c 0a090909 IOc) to HTML....\n- 0x003ebc38 20286f6e 6c792077 68656e20 2d662069 (only when -f i\n- 0x003ebc48 73206361 662c206d 6166206f 72206762 s caf, maf or gb\n- 0x003ebc58 66290a09 20202061 736e7009 0920616e f).. asnp.. an\n- 0x003ebc68 616c7973 6973206f 6620534e 50207461 alysis of SNP ta\n- 0x003ebc78 67730a09 09092028 6f6e6c79 20776865 gs.... (only whe\n- 0x003ebc88 6e202d66 20697320 6361662c 206d6166 n -f is caf, maf\n- 0x003ebc98 206f7220 67626629 0a092020 20637374 or gbf).. cst\n- 0x003ebca8 61747309 20636f6e 74696720 73746174 ats. contig stat\n- 0x003ebcb8 69737469 63732066 696c6520 6c696b65 istics file like\n- 0x003ebcc8 2066726f 6d204d49 52410a09 09092028 from MIRA.... (\n- 0x003ebcd8 6f6e6c79 20776865 6e20736f 75726365 only when source\n- 0x003ebce8 20636f6e 7461696e 7320636f 6e746967 contains contig\n- 0x003ebcf8 73290a09 20202063 726c6973 74092063 s).. crlist. c\n- 0x003ebd08 6f6e7469 67207265 6164206c 69737420 ontig read list \n- 0x003ebd18 66696c65 206c696b 65206672 6f6d204d file like from M\n- 0x003ebd28 4952410a 09090920 286f6e6c 79207768 IRA.... (only wh\n- 0x003ebd38 656e2073 6f757263 6520636f 6e746169 en source contai\n- 0x003ebd48 6e732063 6f6e7469 6773290a 09202020 ns contigs).. \n- 0x003ebd58 6d61736b 65646661 73746109 20726561 maskedfasta. rea\n- 0x003ebd68 64732077 68657265 20736571 75656e63 ds where sequenc\n- 0x003ebd78 696e6720 76656374 6f722069 73206d61 ing vector is ma\n- 0x003ebd88 736b6564 206f7574 0a090909 20287769 sked out.... (wi\n- 0x003ebd98 74682058 2920746f 20464153 54412066 th X) to FASTA f\n- 0x003ebda8 696c6520 28717561 6c697469 65732074 ile (qualities t\n- 0x003ebdb8 6f202e71 75616c29 0a092020 20736361 o .qual).. sca\n- 0x003ebdc8 66090920 73657175 656e6365 73206f72 f.. sequences or\n- 0x003ebdd8 20636f6d 706c6574 65206173 73656d62 complete assemb\n- 0x003ebde8 6c792074 6f207369 6e676c65 20736571 ly to single seq\n- 0x003ebdf8 75656e63 65732043 41460a00 092d6109 uences CAF...-a.\n- 0x003ebe08 09417070 656e6420 746f2074 61726765 .Append to targe\n- 0x003ebe18 74206669 6c657320 696e7374 65616420 t files instead \n- 0x003ebe28 6f662072 65777269 74696e67 0a000000 of rewriting....\n- 0x003ebe38 092d4109 09446f20 6e6f7420 41646a75 .-A..Do not Adju\n- 0x003ebe48 73742073 65717565 6e636520 63617365 st sequence case\n- 0x003ebe58 0a090909 20576865 6e207265 6164696e .... When readin\n- 0x003ebe68 6720666f 726d6174 73207768 69636820 g formats which \n- 0x003ebe78 64656669 6e652063 6c697070 696e6720 define clipping \n- 0x003ebe88 706f696e 74732c0a 09090920 20616e64 points,.... and\n- 0x003ebe98 20736176 696e6720 746f2066 6f726d61 saving to forma\n- 0x003ebea8 74732077 68696368 20646f20 6e6f7420 ts which do not \n- 0x003ebeb8 68617665 20636c69 7070696e 670a0909 have clipping...\n- 0x003ebec8 09202069 6e666f72 6d617469 6f6e2c20 . information, \n- 0x003ebed8 6d697261 636f6e76 65727420 6e6f726d miraconvert norm\n- 0x003ebee8 616c6c79 2061646a 75737473 20746865 ally adjusts the\n- 0x003ebef8 20636173 65206f66 0a090909 20207265 case of.... re\n- 0x003ebf08 61642073 65717565 6e636573 3a206c6f ad sequences: lo\n- 0x003ebf18 77657220 63617365 20666f72 20636c69 wer case for cli\n- 0x003ebf28 70706564 20706172 74732c20 75707065 pped parts, uppe\n- 0x003ebf38 720a0909 09202063 61736520 666f7220 r.... case for \n- 0x003ebf48 756e636c 69707065 64207061 72747320 unclipped parts \n- 0x003ebf58 6f662072 65616473 2e0a0909 09202055 of reads..... U\n- 0x003ebf68 7365202d 41206966 20796f75 20646f20 se -A if you do \n- 0x003ebf78 6e6f7420 77616e74 20746869 732e2053 not want this. S\n- 0x003ebf88 65652061 6c736f20 2d432e0a 09090920 ee also -C..... \n- 0x003ebf98 4170706c 69657320 6f6e6c79 20746f20 Applies only to \n- 0x003ebfa8 66696c65 732f666f 726d6174 73207768 files/formats wh\n- 0x003ebfb8 69636820 646f206e 6f742063 6f6e7461 ich do not conta\n- 0x003ebfc8 696e0a09 09092020 636f6e74 6967732e in.... contigs.\n- 0x003ebfd8 0a000000 092d6209 09426c69 6e642064 .....-b..Blind d\n- 0x003ebfe8 6174610a 09090920 5265706c 61636573 ata.... Replaces\n- 0x003ebff8 20616c6c 20626173 65732069 6e207265 all bases in re\n- 0x003ec008 6164732f 636f6e74 69677320 77697468 ads/contigs with\n- 0x003ec018 20612027 63270a00 092d4309 09506572 a 'c'...-C..Per\n- 0x003ec028 666f726d 20686172 6420636c 69702074 form hard clip t\n- 0x003ec038 6f207265 6164730a 09090920 5768656e o reads.... When\n- 0x003ec048 20726561 64696e67 20666f72 6d617473 reading formats\n- 0x003ec058 20776869 63682064 6566696e 6520636c which define cl\n- 0x003ec068 69707069 6e672070 6f696e74 732c2077 ipping points, w\n- 0x003ec078 696c6c0a 09090920 20736176 65206f6e ill.... save on\n- 0x003ec088 6c792074 68652075 6e636c69 70706564 ly the unclipped\n- 0x003ec098 20706172 7420696e 746f2074 68652072 part into the r\n- 0x003ec0a8 6573756c 74206669 6c652e0a 09090920 esult file..... \n- 0x003ec0b8 4170706c 69657320 6f6e6c79 20746f20 Applies only to \n- 0x003ec0c8 66696c65 732f666f 726d6174 73207768 files/formats wh\n- 0x003ec0d8 69636820 646f206e 6f742063 6f6e7461 ich do not conta\n- 0x003ec0e8 696e0a09 09092020 636f6e74 6967732e in.... contigs.\n- 0x003ec0f8 0a000000 092d6409 0944656c 65746520 .....-d..Delete \n- 0x003ec108 67617020 6f6e6c79 20636f6c 756d6e73 gap only columns\n- 0x003ec118 0a090909 20576865 6e206f75 74707574 .... When output\n- 0x003ec128 20697320 636f6e74 6967733a 2064656c is contigs: del\n- 0x003ec138 65746520 636f6c75 6d6e7320 74686174 ete columns that\n- 0x003ec148 20617265 0a090909 2020656e 74697265 are.... entire\n- 0x003ec158 6c792067 61707320 286c696b 65206166 ly gaps (like af\n- 0x003ec168 74657220 68617669 6e672064 656c6574 ter having delet\n- 0x003ec178 65642072 65616473 20647572 696e670a ed reads during.\n- 0x003ec188 09090920 20656469 74696e67 20696e20 ... editing in \n- 0x003ec198 67617034 206f7220 73696d69 6c617229 gap4 or similar)\n- 0x003ec1a8 0a090909 20576865 6e206f75 74707574 .... When output\n- 0x003ec1b8 20697320 72656164 733a2064 656c6574 is reads: delet\n- 0x003ec1c8 65206761 70732069 6e207265 6164730a e gaps in reads.\n- 0x003ec1d8 00000000 092d4609 0946696c 74657220 .....-F..Filter \n- 0x003ec1e8 72656164 2067726f 75707320 746f2064 read groups to d\n- 0x003ec1f8 69666665 72656e74 2066696c 65730a09 ifferent files..\n- 0x003ec208 09092057 6f726b73 206f6e6c 7920666f .. Works only fo\n- 0x003ec218 7220696e 70757420 66696c65 73207769 r input files wi\n- 0x003ec228 74682072 65616467 726f7570 73202843 th readgroups (C\n- 0x003ec238 41462f4d 4146290a 09090920 3320286f AF/MAF).... 3 (o\n- 0x003ec248 72203429 2066696c 65732067 656e6572 r 4) files gener\n- 0x003ec258 61746564 3a206f6e 65206f72 2074776f ated: one or two\n- 0x003ec268 20666f72 20706169 7265642c 206f6e65 for paired, one\n- 0x003ec278 0a090909 2020666f 7220756e 70616972 .... for unpair\n- 0x003ec288 65642061 6e64206f 6e652066 6f722064 ed and one for d\n- 0x003ec298 65627269 73207265 6164732e 0a090909 ebris reads.....\n- 0x003ec2a8 20526561 64732069 6e207061 69726564 Reads in paired\n- 0x003ec2b8 2066696c 65206172 6520696e 7465726c file are interl\n- 0x003ec2c8 61636564 20627920 64656661 756c742c aced by default,\n- 0x003ec2d8 20757365 202d460a 09090920 20747769 use -F.... twi\n- 0x003ec2e8 63652074 6f206372 65617465 20736570 ce to create sep\n- 0x003ec2f8 61726174 65206669 6c65732e 0a000000 arate files.....\n- 0x003ec308 092d6d09 094d616b 6520636f 6e746967 .-m..Make contig\n- 0x003ec318 7320286f 6e6c7920 666f7220 2d74203d s (only for -t =\n- 0x003ec328 20636166 206f7220 6d616629 0a090909 caf or maf)....\n- 0x003ec338 20456e63 61736520 73696e67 6c652072 Encase single r\n- 0x003ec348 65616473 20617320 636f6e74 69672073 eads as contig s\n- 0x003ec358 696e676c 65747320 696e746f 20746865 inglets into the\n- 0x003ec368 20434146 2f4d4146 0a090909 2066696c CAF/MAF.... fil\n- 0x003ec378 652e0a00 092d6e20 3c66696c 656e616d e....-n .when given, s\n- 0x003ec398 656c6563 7473206f 6e6c7920 72656164 elects only read\n- 0x003ec3a8 73206f72 20636f6e 74696773 20676976 s or contigs giv\n- 0x003ec3b8 656e2062 790a0909 09206e61 6d652069 en by.... name i\n- 0x003ec3c8 6e207468 61742066 696c652e 0a000000 n that file.....\n- 0x003ec3d8 092d4e20 3c66696c 656e616d 653e096c .-N .l\n- 0x003ec3e8 696b6520 2d6e2c20 62757420 736f7274 ike -n, but sort\n- 0x003ec3f8 73206f75 74707574 20616363 6f726469 s output accordi\n- 0x003ec408 6e672074 6f206f72 64657220 67697665 ng to order give\n- 0x003ec418 6e0a0909 0920696e 2066696c 652e0a00 n.... in file...\n- 0x003ec428 092d6909 09776865 6e202d6e 20697320 .-i..when -n is \n- 0x003ec438 75736564 2c20696e 76657274 73207468 used, inverts th\n- 0x003ec448 65207365 6c656374 696f6e0a 00000000 e selection.....\n- 0x003ec458 092d6f20 3c717561 6c697479 3e740946 .-o t.F\n- 0x003ec468 41535451 20717561 6c697479 204f6666 ASTQ quality Off\n- 0x003ec478 73657420 286f6e6c 7920666f 72202d66 set (only for -f\n- 0x003ec488 203d2027 66617374 7127290a 09090920 = 'fastq').... \n- 0x003ec498 4f666673 6574206f 66207175 616c6974 Offset of qualit\n- 0x003ec4a8 79207661 6c756573 20696e20 46415354 y values in FAST\n- 0x003ec4b8 51206669 6c652e20 44656661 756c7420 Q file. Default \n- 0x003ec4c8 6f662033 330a0909 09206c6f 61647320 of 33.... loads \n- 0x003ec4d8 53616e67 65722f50 68726564 20737479 Sanger/Phred sty\n- 0x003ec4e8 6c652066 696c6573 2c207573 696e6720 le files, using \n- 0x003ec4f8 30207472 69657320 746f0a09 09092061 0 tries to.... a\n- 0x003ec508 75746f6d 61746963 616c6c79 20726563 utomatically rec\n- 0x003ec518 6f676e69 73652e0a 00000000 092d5020 ognise.......-P \n- 0x003ec528 3c737472 696e673e 09537472 696e6720 .String \n- 0x003ec538 77697468 204d4952 41207061 72616d65 with MIRA parame\n- 0x003ec548 74657273 20746f20 62652070 61727365 ters to be parse\n- 0x003ec558 640a0909 09205573 6566756c 20776865 d.... Useful whe\n- 0x003ec568 6e207365 7474696e 67207061 72616d65 n setting parame\n- 0x003ec578 74657273 20616666 65637469 6e672063 ters affecting c\n- 0x003ec588 6f6e7365 6e737573 0a090909 2063616c onsensus.... cal\n- 0x003ec598 6c696e67 206c696b 65202d43 4f3a6d72 ling like -CO:mr\n- 0x003ec5a8 70672065 74632e0a 09090920 452e672e pg etc..... E.g.\n- 0x003ec5b8 3a202d50 20223435 345f5345 5454494e : -P \"454_SETTIN\n- 0x003ec5c8 4753202d 434f3a6d 7270673d 33220a00 GS -CO:mrpg=3\"..\n- 0x003ec5d8 092d7120 3c717561 6c697479 3e095365 .-q .Se\n- 0x003ec5e8 74206465 6661756c 74207175 616c6974 t default qualit\n- 0x003ec5f8 7920666f 72206261 73657320 696e2066 y for bases in f\n- 0x003ec608 696c6520 74797065 73207769 74686f75 ile types withou\n- 0x003ec618 740a0909 09207175 616c6974 79207661 t.... quality va\n- 0x003ec628 6c756573 2e204675 72746865 726d6f72 lues. Furthermor\n- 0x003ec638 652c2064 6f206e6f 74207374 6f702069 e, do not stop i\n- 0x003ec648 66206578 70656374 65640a09 09092071 f expected.... q\n- 0x003ec658 75616c69 74792066 696c6573 20617265 uality files are\n- 0x003ec668 206d6973 73696e67 2028652e 672e2027 missing (e.g. '\n- 0x003ec678 2e666173 74612729 0a000000 092d5220 .fasta').....-R \n- 0x003ec688 3c6e616d 653e0952 656e616d 6520636f .Rename co\n- 0x003ec698 6e746967 732f7369 6e676c65 74732f72 ntigs/singlets/r\n- 0x003ec6a8 65616473 20776974 68206769 76656e20 eads with given \n- 0x003ec6b8 6e616d65 20737472 696e670a 09090920 name string.... \n- 0x003ec6c8 746f2077 68696368 20612063 6f756e74 to which a count\n- 0x003ec6d8 65722069 73206170 70656e64 65642e0a er is appended..\n- 0x003ec6e8 09090920 4b6e6f77 6e206275 673a2077 ... Known bug: w\n- 0x003ec6f8 696c6c20 63726561 74652064 75706c69 ill create dupli\n- 0x003ec708 63617465 206e616d 65732069 6620696e cate names if in\n- 0x003ec718 7075740a 09090920 20636f6e 7461696e put.... contain\n- 0x003ec728 7320636f 6e746967 732f7369 6e676c65 s contigs/single\n- 0x003ec738 74732061 73207765 6c6c2061 73206672 ts as well as fr\n- 0x003ec748 65652072 65616473 2c20692e 652e0a09 ee reads, i.e...\n- 0x003ec758 09092020 72656164 73206e6f 7420696e .. reads not in\n- 0x003ec768 20636f6e 74696773 206e6f72 2073696e contigs nor sin\n- 0x003ec778 676c6574 732e0a00 092d5320 3c6e616d glets....-S .(name)Scheme \n- 0x003ec798 666f7220 72656e61 6d696e67 20726561 for renaming rea\n- 0x003ec7a8 64732c20 696d706f 7274616e 7420666f ds, important fo\n- 0x003ec7b8 720a0909 09202070 61697265 642d656e r.... paired-en\n- 0x003ec7c8 64732e20 4f6e6c79 2027736f 6c657861 ds. Only 'solexa\n- 0x003ec7d8 27206973 20637572 72656e74 6c792073 ' is currently s\n- 0x003ec7e8 7570706f 72746564 2e0a0000 092d5409 upported.....-T.\n- 0x003ec7f8 09576865 6e20636f 6e766572 74696e67 .When converting\n- 0x003ec808 2073696e 676c6520 72656164 732c2074 single reads, t\n- 0x003ec818 72696d2f 636c6970 20617761 79207374 rim/clip away st\n- 0x003ec828 72657463 6865730a 09090920 6f66204e retches.... of N\n- 0x003ec838 20616e64 20582061 6e642065 6e647320 and X and ends \n- 0x003ec848 6f662072 65616473 2e204e6f 74653a20 of reads. Note: \n- 0x003ec858 72656d65 6d626572 20746f20 75736520 remember to use \n- 0x003ec868 2d432074 6f0a0909 0920616c 736f2070 -C to.... also p\n- 0x003ec878 6572666f 726d2061 20686172 6420636c erform a hard cl\n- 0x003ec888 69702028 652e672e 20776974 68204641 ip (e.g. with FA\n- 0x003ec898 53544120 6173206f 75747075 74292e0a STA as output)..\n- 0x003ec8a8 00000000 092d7609 09507269 6e742076 .....-v..Print v\n- 0x003ec8b8 65727369 6f6e206e 756d6265 7220616e ersion number an\n- 0x003ec8c8 64206578 69740a00 092d5920 3c696e74 d exit...-Y .Yield. Max\n- 0x003ec8e8 2028636c 69707065 642f7061 64646564 (clipped/padded\n- 0x003ec8f8 29206261 73657320 746f2063 6f6e7665 ) bases to conve\n- 0x003ec908 72742e0a 09090920 5768656e 20757365 rt..... When use\n- 0x003ec918 64206f6e 20726561 64733a20 6f757470 d on reads: outp\n- 0x003ec928 75742077 696c6c20 636f6e74 61696e20 ut will contain \n- 0x003ec938 66697273 74207265 61647320 6f660a09 first reads of..\n- 0x003ec948 09092020 66696c65 20776865 7265206c .. file where l\n- 0x003ec958 656e6774 68206f66 20636c69 70706564 ength of clipped\n- 0x003ec968 20626173 65732074 6f74616c 73206174 bases totals at\n- 0x003ec978 206c6561 7374202d 592e0a09 09092057 least -Y..... W\n- 0x003ec988 68656e20 75736564 206f6e20 636f6e74 hen used on cont\n- 0x003ec998 6967733a 206f7574 70757420 77696c6c igs: output will\n- 0x003ec9a8 20636f6e 7461696e 20666972 73742063 contain first c\n- 0x003ec9b8 6f6e7469 67730a09 09092020 6f662066 ontigs.... of f\n- 0x003ec9c8 696c6520 77686572 65206c65 6e677468 ile where length\n- 0x003ec9d8 206f6620 70616464 65642063 6f6e7469 of padded conti\n- 0x003ec9e8 67732074 6f74616c 73206174 206c6561 gs totals at lea\n- 0x003ec9f8 73740a09 09092020 2d592e0a 00000000 st.... -Y......\n- 0x003eca08 0a092d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ..--------------\n+ 0x003e64d8 696c6465 72320a54 7565204a 616e2020 ilder2.Tue Jan \n+ 0x003e64e8 39203032 3a35333a 3032202b 31342032 9 02:53:02 +14 2\n+ 0x003e64f8 3032340a 4f6e3a20 4c696e75 7820692d 024.On: Linux i-\n+ 0x003e6508 63617074 7572652d 7468652d 686f7374 capture-the-host\n+ 0x003e6518 6e616d65 20362e31 2e302d31 372d6172 name 6.1.0-17-ar\n+ 0x003e6528 6d363420 23312053 4d502044 65626961 m64 #1 SMP Debia\n+ 0x003e6538 6e20362e 312e3639 2d312028 32303233 n 6.1.69-1 (2023\n+ 0x003e6548 2d31322d 33302920 61617263 68363420 -12-30) aarch64 \n+ 0x003e6558 474e552f 4c696e75 780a0000 342e392e GNU/Linux...4.9.\n+ 0x003e6568 36000000 6d697261 6d657209 284d4952 6...miramer.(MIR\n+ 0x003e6578 414c4942 20766572 73696f6e 20000000 ALIB version ...\n+ 0x003e6588 41757468 6f723a20 42617374 69656e20 Author: Bastien \n+ 0x003e6598 43686576 72657578 09286261 63684063 Chevreux.(bach@c\n+ 0x003e65a8 68657672 6575782e 6f726729 0a0a0000 hevreux.org)....\n+ 0x003e65b8 4d697373 696e6720 6e616d65 206f6620 Missing name of \n+ 0x003e65c8 696e7075 742e0a00 4c6f6164 696e6720 input...Loading \n+ 0x003e65d8 64617461 20696e74 6f206d65 6d6f7279 data into memory\n+ 0x003e65e8 202e2e2e 00000000 636f763d 285b5c64 .......cov=([\\d\n+ 0x003e65f8 5c2e5d2b 29000000 73746f64 00000000 \\.]+)...stod....\n+ 0x003e6608 20697320 6d697373 696e6720 6120636f is missing a co\n+ 0x003e6618 76657261 6765206e 756d6265 7220696e verage number in\n+ 0x003e6628 20746865 20666f72 6d206f66 2027636f the form of 'co\n+ 0x003e6638 763d7878 2e787878 2720696e 20697473 v=xx.xxx' in its\n+ 0x003e6648 20636f6d 6d656e74 732e0a00 536f7272 comments...Sorr\n+ 0x003e6658 792c2066 69782074 6861742e 0a000000 y, fix that.....\n+ 0x003e6668 68633a6a 3a6b3a76 00000000 6d697261 hc:j:k:v....mira\n+ 0x003e6678 09094d49 52414c49 42207665 7273696f ..MIRALIB versio\n+ 0x003e6688 6e200000 0a417574 686f723a 09094261 n ...Author:..Ba\n+ 0x003e6698 73746965 6e204368 65767265 75782028 stien Chevreux (\n+ 0x003e66a8 62616368 40636865 76726575 782e6f72 bach@chevreux.or\n+ 0x003e66b8 67290a50 7572706f 73653a09 2e2e2e0a g).Purpose:.....\n+ 0x003e66c8 0a000000 55736167 653a0a2c 2c2c2c20 ....Usage:.,,,, \n+ 0x003e66d8 2e2e2e0a 00000000 0a4f7074 696f6e73 .........Options\n+ 0x003e66e8 3a0a0000 20202d68 202f202d 2d68656c :... -h / --hel\n+ 0x003e66f8 70090909 09546869 73206865 6c702074 p....This help t\n+ 0x003e6708 6578740a 20202d76 202f202d 2d766572 ext. -v / --ver\n+ 0x003e6718 73696f6e 09090950 72696e74 20766572 sion...Print ver\n+ 0x003e6728 73696f6e 20616e64 20657869 740a0000 sion and exit...\n+ 0x003e6738 536f7272 792c202d 6b20666f 72206b6d Sorry, -k for km\n+ 0x003e6748 65722073 697a6520 6d757374 20626520 er size must be \n+ 0x003e6758 3c3d2033 3220666f 72207468 65207469 <= 32 for the ti\n+ 0x003e6768 6d652062 65696e67 2e0a0000 696e7420 me being....int \n+ 0x003e6778 4d697261 5343453a 3a6d6169 6e536967 MiraSCE::mainSig\n+ 0x003e6788 6e696669 63616e74 436f6e74 69674578 nificantContigEx\n+ 0x003e6798 74726163 74696f6e 28696e74 20617267 traction(int arg\n+ 0x003e67a8 632c2063 68617220 2a2a2061 72677629 c, char ** argv)\n+ 0x003e67b8 00000000 4e554c00 534f4800 53545800 ....NUL.SOH.STX.\n+ 0x003e67c8 45545800 454f5400 454e5100 41434b00 ETX.EOT.ENQ.ACK.\n+ 0x003e67d8 616c6572 74000000 6261636b 73706163 alert...backspac\n+ 0x003e67e8 65000000 74616200 6e65776c 696e6500 e...tab.newline.\n+ 0x003e67f8 76657274 6963616c 2d746162 00000000 vertical-tab....\n+ 0x003e6808 666f726d 2d666565 64000000 63617272 form-feed...carr\n+ 0x003e6818 69616765 2d726574 75726e00 534f0000 iage-return.SO..\n+ 0x003e6828 53490000 444c4500 44433100 44433200 SI..DLE.DC1.DC2.\n+ 0x003e6838 44433300 44433400 4e414b00 53594e00 DC3.DC4.NAK.SYN.\n+ 0x003e6848 45544200 43414e00 454d0000 53554200 ETB.CAN.EM..SUB.\n+ 0x003e6858 45534300 49533400 49533300 49533200 ESC.IS4.IS3.IS2.\n+ 0x003e6868 49533100 6578636c 616d6174 696f6e2d IS1.exclamation-\n+ 0x003e6878 6d61726b 00000000 71756f74 6174696f mark....quotatio\n+ 0x003e6888 6e2d6d61 726b0000 6e756d62 65722d73 n-mark..number-s\n+ 0x003e6898 69676e00 646f6c6c 61722d73 69676e00 ign.dollar-sign.\n+ 0x003e68a8 70657263 656e742d 7369676e 00000000 percent-sign....\n+ 0x003e68b8 616d7065 7273616e 64000000 61706f73 ampersand...apos\n+ 0x003e68c8 74726f70 68650000 6c656674 2d706172 trophe..left-par\n+ 0x003e68d8 656e7468 65736973 00000000 72696768 enthesis....righ\n+ 0x003e68e8 742d7061 72656e74 68657369 73000000 t-parenthesis...\n+ 0x003e68f8 61737465 7269736b 00000000 706c7573 asterisk....plus\n+ 0x003e6908 2d736967 6e000000 636f6d6d 61000000 -sign...comma...\n+ 0x003e6918 68797068 656e0000 70657269 6f640000 hyphen..period..\n+ 0x003e6928 7a65726f 00000000 6f6e6500 74776f00 zero....one.two.\n+ 0x003e6938 74687265 65000000 666f7572 00000000 three...four....\n+ 0x003e6948 66697665 00000000 73697800 73657665 five....six.seve\n+ 0x003e6958 6e000000 65696768 74000000 6e696e65 n...eight...nine\n+ 0x003e6968 00000000 73656d69 636f6c6f 6e000000 ....semicolon...\n+ 0x003e6978 6c657373 2d746861 6e2d7369 676e0000 less-than-sign..\n+ 0x003e6988 65717561 6c732d73 69676e00 67726561 equals-sign.grea\n+ 0x003e6998 7465722d 7468616e 2d736967 6e000000 ter-than-sign...\n+ 0x003e69a8 71756573 74696f6e 2d6d6172 6b000000 question-mark...\n+ 0x003e69b8 636f6d6d 65726369 616c2d61 74000000 commercial-at...\n+ 0x003e69c8 42000000 46000000 48000000 49000000 B...F...H...I...\n+ 0x003e69d8 4a000000 4b000000 4c000000 4d000000 J...K...L...M...\n+ 0x003e69e8 4f000000 50000000 51000000 55000000 O...P...Q...U...\n+ 0x003e69f8 56000000 57000000 5a000000 6c656674 V...W...Z...left\n+ 0x003e6a08 2d737175 6172652d 62726163 6b657400 -square-bracket.\n+ 0x003e6a18 6261636b 736c6173 68000000 72696768 backslash...righ\n+ 0x003e6a28 742d7371 75617265 2d627261 636b6574 t-square-bracket\n+ 0x003e6a38 00000000 63697263 756d666c 65780000 ....circumflex..\n+ 0x003e6a48 756e6465 7273636f 72650000 67726176 underscore..grav\n+ 0x003e6a58 652d6163 63656e74 00000000 62000000 e-accent....b...\n+ 0x003e6a68 63000000 69000000 6a000000 75000000 c...i...j...u...\n+ 0x003e6a78 76000000 7a000000 6c656674 2d637572 v...z...left-cur\n+ 0x003e6a88 6c792d62 7261636b 65740000 76657274 ly-bracket..vert\n+ 0x003e6a98 6963616c 2d6c696e 65000000 72696768 ical-line...righ\n+ 0x003e6aa8 742d6375 726c792d 62726163 6b657400 t-curly-bracket.\n+ 0x003e6ab8 74696c64 65000000 44454c00 616c6e75 tilde...DEL.alnu\n+ 0x003e6ac8 6d000000 616c7068 61000000 626c616e m...alpha...blan\n+ 0x003e6ad8 6b000000 636e7472 6c000000 64696769 k...cntrl...digi\n+ 0x003e6ae8 74000000 67726170 68000000 6c6f7765 t...graph...lowe\n+ 0x003e6af8 72000000 7072696e 74000000 70756e63 r...print...punc\n+ 0x003e6b08 74000000 75707065 72000000 78646967 t...upper...xdig\n+ 0x003e6b18 69740000 636f6e73 74207374 643a3a73 it..const std::s\n+ 0x003e6b28 7472696e 67202620 53747269 6e67436f tring & StringCo\n+ 0x003e6b38 6e746169 6e65723a 3a676574 456e7472 ntainer::getEntr\n+ 0x003e6b48 7928456e 74727920 65290000 68656c70 y(Entry e)..help\n+ 0x003e6b58 00000000 6b6d6572 73697a65 00000000 ....kmersize....\n+ 0x003e6b68 76657273 696f6e00 556e6578 70656374 version.Unexpect\n+ 0x003e6b78 65642065 6e64206f 66207265 67657820 ed end of regex \n+ 0x003e6b88 7768656e 20657363 6170696e 672e0000 when escaping...\n+ 0x003e6b98 556e6578 70656374 65642065 6e64206f Unexpected end o\n+ 0x003e6ba8 66207265 67657820 7768656e 20726561 f regex when rea\n+ 0x003e6bb8 64696e67 20636f6e 74726f6c 20636f64 ding control cod\n+ 0x003e6bc8 652e0000 556e6578 70656374 65642065 e...Unexpected e\n+ 0x003e6bd8 6e64206f 66207265 67657820 7768656e nd of regex when\n+ 0x003e6be8 20617363 69692063 68617261 63746572 ascii character\n+ 0x003e6bf8 2e000000 53747269 6e67436f 6e746169 ....StringContai\n+ 0x003e6c08 6e65723a 20000000 0a547269 65642074 ner: ....Tried t\n+ 0x003e6c18 6f206765 74206e6f 6e2d6578 69737465 o get non-existe\n+ 0x003e6c28 6e742065 6e747279 3a200000 76656374 nt entry: ..vect\n+ 0x003e6c38 6f723a3a 5f4d5f72 65616c6c 6f635f69 or::_M_realloc_i\n+ 0x003e6c48 6e736572 74000000 63616e6e 6f742063 nsert...cannot c\n+ 0x003e6c58 72656174 65207374 643a3a76 6563746f reate std::vecto\n+ 0x003e6c68 72206c61 72676572 20746861 6e206d61 r larger than ma\n+ 0x003e6c78 785f7369 7a652829 00000000 556e6578 x_size()....Unex\n+ 0x003e6c88 70656374 65642065 73636170 65206368 pected escape ch\n+ 0x003e6c98 61726163 7465722e 00000000 556e6578 aracter.....Unex\n+ 0x003e6ca8 70656374 65642065 6e64206f 66207265 pected end of re\n+ 0x003e6cb8 67657820 7768656e 20696e20 616e206f gex when in an o\n+ 0x003e6cc8 70656e20 70617265 6e746865 7369732e pen parenthesis.\n+ 0x003e6cd8 00000000 496e7661 6c696420 73706563 ....Invalid spec\n+ 0x003e6ce8 69616c20 6f70656e 20706172 656e7468 ial open parenth\n+ 0x003e6cf8 65736973 2e000000 556e6578 70656374 esis....Unexpect\n+ 0x003e6d08 65642065 6e64206f 66207265 67657820 ed end of regex \n+ 0x003e6d18 7768656e 20696e20 62726163 65206578 when in brace ex\n+ 0x003e6d28 70726573 73696f6e 2e000000 556e6578 pression....Unex\n+ 0x003e6d38 70656374 65642063 68617261 63746572 pected character\n+ 0x003e6d48 20696e20 62726163 65206578 70726573 in brace expres\n+ 0x003e6d58 73696f6e 2e000000 556e6578 70656374 sion....Unexpect\n+ 0x003e6d68 65642065 6e64206f 66206368 61726163 ed end of charac\n+ 0x003e6d78 74657220 636c6173 732e0000 556e6578 ter class...Unex\n+ 0x003e6d88 70656374 65642065 6e64206f 66207265 pected end of re\n+ 0x003e6d98 67657820 7768656e 20696e20 62726163 gex when in brac\n+ 0x003e6da8 6b657420 65787072 65737369 6f6e2e00 ket expression..\n+ 0x003e6db8 556e6578 70656374 65642063 68617261 Unexpected chara\n+ 0x003e6dc8 63746572 20636c61 7373206f 70656e20 cter class open \n+ 0x003e6dd8 62726163 6b65742e 00000000 5e245c2e bracket.....^$\\.\n+ 0x003e6de8 2a2b3f28 295b5d7b 7d7c0000 2e5b5c28 *+?()[]{}|...[\\(\n+ 0x003e6df8 292a2b3f 7b7c5e24 00000000 2e5b5c2a )*+?{|^$.....[\\*\n+ 0x003e6e08 5e240000 2e5b5c28 292a2b3f 7b7c5e24 ^$...[\\()*+?{|^$\n+ 0x003e6e18 0a000000 2e5b5c2a 5e240a00 4e756d62 .....[\\*^$..Numb\n+ 0x003e6e28 6572206f 66204e46 41207374 61746573 er of NFA states\n+ 0x003e6e38 20657863 65656473 206c696d 69742e20 exceeds limit. \n+ 0x003e6e48 506c6561 73652075 73652073 686f7274 Please use short\n+ 0x003e6e58 65722072 65676578 20737472 696e672c er regex string,\n+ 0x003e6e68 206f7220 75736520 736d616c 6c657220 or use smaller \n+ 0x003e6e78 62726163 65206578 70726573 73696f6e brace expression\n+ 0x003e6e88 2c206f72 206d616b 65205f47 4c494243 , or make _GLIBC\n+ 0x003e6e98 58585f52 45474558 5f535441 54455f4c XX_REGEX_STATE_L\n+ 0x003e6ea8 494d4954 206c6172 6765722e 00000000 IMIT larger.....\n+ 0x003e6eb8 556e6578 70656374 65642062 61636b2d Unexpected back-\n+ 0x003e6ec8 72656665 72656e63 6520696e 20706f6c reference in pol\n+ 0x003e6ed8 796e6f6d 69616c20 6d6f6465 2e000000 ynomial mode....\n+ 0x003e6ee8 4261636b 2d726566 6572656e 63652069 Back-reference i\n+ 0x003e6ef8 6e646578 20657863 65656473 20637572 ndex exceeds cur\n+ 0x003e6f08 72656e74 20737562 2d657870 72657373 rent sub-express\n+ 0x003e6f18 696f6e20 636f756e 742e0000 4261636b ion count...Back\n+ 0x003e6f28 2d726566 6572656e 63652072 65666572 -reference refer\n+ 0x003e6f38 72656420 746f2061 6e206f70 656e6564 red to an opened\n+ 0x003e6f48 20737562 2d657870 72657373 696f6e2e sub-expression.\n+ 0x003e6f58 00000000 63616e6e 6f742063 72656174 ....cannot creat\n+ 0x003e6f68 65207374 643a3a64 65717565 206c6172 e std::deque lar\n+ 0x003e6f78 67657220 7468616e 206d6178 5f73697a ger than max_siz\n+ 0x003e6f88 65282900 496e7661 6c696420 63686172 e().Invalid char\n+ 0x003e6f98 61637465 7220636c 6173732e 00000000 acter class.....\n+ 0x003e6fa8 4e6f7468 696e6720 746f2072 65706561 Nothing to repea\n+ 0x003e6fb8 74206265 666f7265 20612071 75616e74 t before a quant\n+ 0x003e6fc8 69666965 722e0000 556e6578 70656374 ifier...Unexpect\n+ 0x003e6fd8 65642074 6f6b656e 20696e20 62726163 ed token in brac\n+ 0x003e6fe8 65206578 70726573 73696f6e 2e000000 e expression....\n+ 0x003e6ff8 556e6578 70656374 65642065 6e64206f Unexpected end o\n+ 0x003e7008 66206272 61636520 65787072 65737369 f brace expressi\n+ 0x003e7018 6f6e2e00 496e7661 6c696420 72616e67 on..Invalid rang\n+ 0x003e7028 6520696e 20627261 63652065 78707265 e in brace expre\n+ 0x003e7038 7373696f 6e2e0000 496e7661 6c696420 ssion...Invalid \n+ 0x003e7048 636f6c6c 61746520 656c656d 656e742e collate element.\n+ 0x003e7058 00000000 496e7661 6c696420 65717569 ....Invalid equi\n+ 0x003e7068 76616c65 6e636520 636c6173 732e0000 valence class...\n+ 0x003e7078 556e6578 70656374 65642064 61736820 Unexpected dash \n+ 0x003e7088 696e2062 7261636b 65742065 78707265 in bracket expre\n+ 0x003e7098 7373696f 6e2e2046 6f722050 4f534958 ssion. For POSIX\n+ 0x003e70a8 2073796e 7461782c 20612064 61736820 syntax, a dash \n+ 0x003e70b8 6973206e 6f742074 72656174 6564206c is not treated l\n+ 0x003e70c8 69746572 616c6c79 206f6e6c 79207768 iterally only wh\n+ 0x003e70d8 656e2069 74206973 20617420 62656769 en it is at begi\n+ 0x003e70e8 6e6e696e 67206f72 20656e64 2e000000 nning or end....\n+ 0x003e70f8 496e7661 6c696420 72616e67 6520696e Invalid range in\n+ 0x003e7108 20627261 636b6574 20657870 72657373 bracket express\n+ 0x003e7118 696f6e2e 00000000 43686172 61637465 ion.....Characte\n+ 0x003e7128 72206973 20657870 65637465 64206166 r is expected af\n+ 0x003e7138 74657220 61206461 73682e00 556e6578 ter a dash..Unex\n+ 0x003e7148 70656374 65642063 68617261 63746572 pected character\n+ 0x003e7158 20696e20 62726163 6b657420 65787072 in bracket expr\n+ 0x003e7168 65737369 6f6e2e00 50617265 6e746865 ession..Parenthe\n+ 0x003e7178 73697320 6973206e 6f742063 6c6f7365 sis is not close\n+ 0x003e7188 642e0000 53743131 5f4d7574 65785f62 d...St11_Mutex_b\n+ 0x003e7198 61736549 4c4e395f 5f676e75 5f637878 aseILN9__gnu_cxx\n+ 0x003e71a8 31325f4c 6f636b5f 706f6c69 63794532 12_Lock_policyE2\n+ 0x003e71b8 45450000 53743139 5f53705f 6d616b65 EE..St19_Sp_make\n+ 0x003e71c8 5f736861 7265645f 74616700 53743136 _shared_tag.St16\n+ 0x003e71d8 5f53705f 636f756e 7465645f 62617365 _Sp_counted_base\n+ 0x003e71e8 494c4e39 5f5f676e 755f6378 7831325f ILN9__gnu_cxx12_\n+ 0x003e71f8 4c6f636b 5f706f6c 69637945 32454500 Lock_policyE2EE.\n+ 0x003e7208 53743233 5f53705f 636f756e 7465645f St23_Sp_counted_\n+ 0x003e7218 7074725f 696e706c 61636549 4e537438 ptr_inplaceINSt8\n+ 0x003e7228 5f5f6465 7461696c 345f4e46 41494e53 __detail4_NFAINS\n+ 0x003e7238 74375f5f 63787831 31313272 65676578 t7__cxx1112regex\n+ 0x003e7248 5f747261 69747349 63454545 45536149 _traitsIcEEEESaI\n+ 0x003e7258 53355f45 4c4e395f 5f676e75 5f637878 S5_ELN9__gnu_cxx\n+ 0x003e7268 31325f4c 6f636b5f 706f6c69 63794532 12_Lock_policyE2\n+ 0x003e7278 45450000 4e537438 5f5f6465 7461696c EE..NSt8__detail\n+ 0x003e7288 31315f41 6e794d61 74636865 72494e53 11_AnyMatcherINS\n+ 0x003e7298 74375f5f 63787831 31313272 65676578 t7__cxx1112regex\n+ 0x003e72a8 5f747261 69747349 6345454c 6230454c _traitsIcEELb0EL\n+ 0x003e72b8 6230454c 62304545 45000000 4e537438 b0ELb0EEE...NSt8\n+ 0x003e72c8 5f5f6465 7461696c 31315f41 6e794d61 __detail11_AnyMa\n+ 0x003e72d8 74636865 72494e53 74375f5f 63787831 tcherINSt7__cxx1\n+ 0x003e72e8 31313272 65676578 5f747261 69747349 112regex_traitsI\n+ 0x003e72f8 6345454c 6230454c 6230454c 62314545 cEELb0ELb0ELb1EE\n+ 0x003e7308 45000000 4e537438 5f5f6465 7461696c E...NSt8__detail\n+ 0x003e7318 31315f41 6e794d61 74636865 72494e53 11_AnyMatcherINS\n+ 0x003e7328 74375f5f 63787831 31313272 65676578 t7__cxx1112regex\n+ 0x003e7338 5f747261 69747349 6345454c 6230454c _traitsIcEELb0EL\n+ 0x003e7348 6231454c 62304545 45000000 4e537438 b1ELb0EEE...NSt8\n+ 0x003e7358 5f5f6465 7461696c 31315f41 6e794d61 __detail11_AnyMa\n+ 0x003e7368 74636865 72494e53 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....+.......?...\n+ 0x003e7728 12000000 7c000000 13000000 0a000000 ....|...........\n+ 0x003e7738 13000000 00000000 13000000 30006208 ............0.b.\n+ 0x003e7748 660c6e0a 720d7409 760b0000 22222f2f f.n.r.t.v...\"\"//\n+ 0x003e7758 5c5c6107 6208660c 6e0a720d 7409760b \\\\a.b.f.n.r.t.v.\n+ 0x003e7768 00000000 626c612e 6d616600 696e7420 ....bla.maf.int \n+ 0x003e7778 4d697261 53636166 666f6c64 3a3a6d61 MiraScaffold::ma\n+ 0x003e7788 696e4d69 72615363 6166666f 6c642869 inMiraScaffold(i\n+ 0x003e7798 6e742061 7267632c 20636861 72202a2a nt argc, char **\n+ 0x003e77a8 20617267 76290000 67656e65 72696300 argv)..generic.\n+ 0x003e77b8 626f6f73 743a3a6d 75746578 3a3a7e6d boost::mutex::~m\n+ 0x003e77c8 75746578 28290000 2f757372 2f696e63 utex()../usr/inc\n+ 0x003e77d8 6c756465 2f626f6f 73742f74 68726561 lude/boost/threa\n+ 0x003e77e8 642f7074 68726561 642f6d75 7465782e d/pthread/mutex.\n+ 0x003e77f8 68707000 21706f73 69783a3a 70746872 hpp.!posix::pthr\n+ 0x003e7808 6561645f 6d757465 785f6465 7374726f ead_mutex_destro\n+ 0x003e7818 7928266d 29000000 436f6e74 726f6c2d y(&m)...Control-\n+ 0x003e7828 43207761 73206361 75676874 2e20436c C was caught. Cl\n+ 0x003e7838 65616e69 6e672075 702c2074 68697320 eaning up, this \n+ 0x003e7848 6d617920 74616b65 20612066 65772073 may take a few s\n+ 0x003e7858 65636f6e 64732e00 6d697261 62616974 econds..mirabait\n+ 0x003e7868 09284d49 52414c49 42207665 7273696f .(MIRALIB versio\n+ 0x003e7878 6e200000 4d495241 62616974 3a206120 n ..MIRAbait: a \n+ 0x003e7888 27677265 7027206c 696b6520 746f6f6c 'grep' like tool\n+ 0x003e7898 20666f72 206b6d65 72732075 7020746f for kmers up to\n+ 0x003e78a8 20323536 2062700a 0a6d6972 61626169 256 bp..mirabai\n+ 0x003e78b8 74207365 6c656374 73207265 61647320 t selects reads \n+ 0x003e78c8 66726f6d 20612072 65616420 636f6c6c from a read coll\n+ 0x003e78d8 65637469 6f6e2077 68696368 20617265 ection which are\n+ 0x003e78e8 20706172 746c7920 73696d69 6c617220 partly similar \n+ 0x003e78f8 6f722065 7175616c 20746f20 73657175 or equal to sequ\n+ 0x003e7908 656e6365 73206465 66696e65 64206173 ences defined as\n+ 0x003e7918 20746172 67657420 62616974 732e2053 target baits. S\n+ 0x003e7928 696d696c 61726974 79206973 20646566 imilarity is def\n+ 0x003e7938 696e6564 20627920 66696e64 696e6720 ined by finding \n+ 0x003e7948 61207573 65722d61 646a7573 7461626c a user-adjustabl\n+ 0x003e7958 65206e75 6d626572 206f6620 636f6d6d e number of comm\n+ 0x003e7968 6f6e206b 2d6d6572 73202873 65717565 on k-mers (seque\n+ 0x003e7978 6e636573 206f6620 6b20636f 6e736563 nces of k consec\n+ 0x003e7988 75746976 65206261 73657329 20776869 utive bases) whi\n+ 0x003e7998 63682061 72652074 68652073 616d6520 ch are the same \n+ 0x003e79a8 696e2074 68652062 61697420 73657175 in the bait sequ\n+ 0x003e79b8 656e6365 7320616e 64207468 65207363 ences and the sc\n+ 0x003e79c8 7265656e 65642073 65717565 6e636573 reened sequences\n+ 0x003e79d8 20746f20 62652073 656c6563 7465642c to be selected,\n+ 0x003e79e8 20656974 68657220 696e2066 6f727761 either in forwa\n+ 0x003e79f8 7264206f 7220666f 72776172 642f7265 rd or forward/re\n+ 0x003e7a08 76657273 6520636f 6d706c65 6d656e74 verse complement\n+ 0x003e7a18 20646972 65637469 6f6e2e20 41646469 direction. Addi\n+ 0x003e7a28 6e672061 20445553 542d6c69 6b652072 ng a DUST-like r\n+ 0x003e7a38 65706561 74206669 6c746572 20666f72 epeat filter for\n+ 0x003e7a48 20726570 65617473 20757020 34206261 repeats up 4 ba\n+ 0x003e7a58 73657320 6973206f 7074696f 6e616c2e ses is optional.\n+ 0x003e7a68 200a5768 656e2075 73656420 6f6e2070 .When used on p\n+ 0x003e7a78 61697265 64206669 6c65732c 2073656c aired files, sel\n+ 0x003e7a88 65637473 20736571 75656e63 65732077 ects sequences w\n+ 0x003e7a98 68657265 20617420 6c656173 74206f6e here at least on\n+ 0x003e7aa8 65206d61 7465206d 61746368 65732e0a e mate matches..\n+ 0x003e7ab8 00000000 0a557361 67653a0a 00000000 .....Usage:.....\n+ 0x003e7ac8 6d697261 62616974 205b6f70 74696f6e mirabait [option\n+ 0x003e7ad8 735d0a09 097b2d62 20626169 7466696c s]...{-b baitfil\n+ 0x003e7ae8 65205b2d 62202e2e 2e5d207c 202d4220 e [-b ...] | -B \n+ 0x003e7af8 66696c65 207c202d 6a206a6f 626c6962 file | -j joblib\n+ 0x003e7b08 72617279 7d0a0909 7b2d7020 66696c65 rary}...{-p file\n+ 0x003e7b18 5f312066 696c655f 32207c20 2d502066 _1 file_2 | -P f\n+ 0x003e7b28 696c6533 7d2a205b 66696c65 34202e2e ile3}* [file4 ..\n+ 0x003e7b38 2e5d0a0a 00000000 4d61696e 206f7074 .]......Main opt\n+ 0x003e7b48 696f6e73 3a0a0000 092d6220 66696c65 ions:....-b file\n+ 0x003e7b58 09094c6f 61642062 61697420 73657175 ..Load bait sequ\n+ 0x003e7b68 656e6365 73206672 6f6d2066 696c650a ences from file.\n+ 0x003e7b78 09090920 286d756c 7469706c 65202d62 ... (multiple -b\n+ 0x003e7b88 20616c6c 6f776564 290a092d 42206669 allowed)..-B fi\n+ 0x003e7b98 6c650909 4c6f6164 20626169 74732066 le..Load baits f\n+ 0x003e7ba8 726f6d20 6b6d6572 20737461 74697374 rom kmer statist\n+ 0x003e7bb8 69637320 66696c65 2c206e6f 74206672 ics file, not fr\n+ 0x003e7bc8 6f6d2073 65717565 6e636520 66696c65 om sequence file\n+ 0x003e7bd8 732e0a09 0909204f 6e6c7920 6f6e6520 s..... Only one \n+ 0x003e7be8 2d422061 6c6c6f77 65642c20 63616e6e -B allowed, cann\n+ 0x003e7bf8 6f742062 6520636f 6d62696e 65642077 ot be combined w\n+ 0x003e7c08 69746820 2d622e0a 09090920 28736565 ith -b..... (see\n+ 0x003e7c18 202d4b20 666f7220 63726561 74696e67 -K for creating\n+ 0x003e7c28 20737563 68206120 66696c65 290a092d such a file)..-\n+ 0x003e7c38 6a206a6f 62090953 6574206f 7074696f j job..Set optio\n+ 0x003e7c48 6e732066 6f722070 72656465 66696e65 ns for predefine\n+ 0x003e7c58 64206a6f 62206672 6f6d2073 7570706c d job from suppl\n+ 0x003e7c68 69656420 4d495241 206c6962 72617279 ied MIRA library\n+ 0x003e7c78 0a090909 20437572 72656e74 6c792061 .... Currently a\n+ 0x003e7c88 7661696c 61626c65 206a6f62 733a0a09 vailable jobs:..\n+ 0x003e7c98 09092020 2072726e 61094261 69742072 .. rrna.Bait r\n+ 0x003e7ca8 524e4120 73657175 656e6365 73000000 RNA sequences...\n+ 0x003e7cb8 0a092d70 2066696c 65312066 696c6532 ..-p file1 file2\n+ 0x003e7cc8 094c6f61 64207061 69726564 20736571 .Load paired seq\n+ 0x003e7cd8 75656e63 65732074 6f207365 61726368 uences to search\n+ 0x003e7ce8 2066726f 6d206669 6c653120 616e6420 from file1 and \n+ 0x003e7cf8 66696c65 320a0909 09204669 6c657320 file2.... Files \n+ 0x003e7d08 6d757374 20636f6e 7461696e 2073616d must contain sam\n+ 0x003e7d18 65206e75 6d626572 206f6620 73657175 e number of sequ\n+ 0x003e7d28 656e6365 732c2073 65717565 6e636520 ences, sequence \n+ 0x003e7d38 0a090909 206e616d 6573206d 75737420 .... names must \n+ 0x003e7d48 62652069 6e207361 6d65206f 72646572 be in same order\n+ 0x003e7d58 2e0a0909 09204d75 6c746970 6c65202d ..... Multiple -\n+ 0x003e7d68 7020616c 6c6f7765 642c2062 7574206d p allowed, but m\n+ 0x003e7d78 75737420 636f6d65 20626566 6f726520 ust come before \n+ 0x003e7d88 6e6f6e2d 70616972 65640a09 09092066 non-paired.... f\n+ 0x003e7d98 696c6573 2e0a092d 50206669 6c650909 iles...-P file..\n+ 0x003e7da8 4c6f6164 20706169 72656420 73657175 Load paired sequ\n+ 0x003e7db8 656e6365 73206672 6f6d2066 696c650a ences from file.\n+ 0x003e7dc8 09090920 46696c65 206d7573 74206265 ... File must be\n+ 0x003e7dd8 20696e74 65726c65 61766564 3a207061 interleaved: pa\n+ 0x003e7de8 69727320 6d757374 20666f6c 6c6f7720 irs must follow \n+ 0x003e7df8 65616368 206f7468 65722c0a 09090920 each other,.... \n+ 0x003e7e08 6e6f6e2d 70616972 73206172 65206e6f non-pairs are no\n+ 0x003e7e18 7420616c 6c6f7765 642e0a09 0909204d t allowed..... M\n+ 0x003e7e28 756c7469 706c6520 2d702061 6c6c6f77 ultiple -p allow\n+ 0x003e7e38 65642c20 62757420 6d757374 20636f6d ed, but must com\n+ 0x003e7e48 65206265 666f7265 206e6f6e 2d706169 e before non-pai\n+ 0x003e7e58 7265640a 09090920 66696c65 732e0a00 red.... files...\n+ 0x003e7e68 0a092d6b 20696e74 09096b6d 6572206c ..-k int..kmer l\n+ 0x003e7e78 656e6774 68206f66 20626169 7420696e ength of bait in\n+ 0x003e7e88 20626173 65732028 3c3d3235 362c2064 bases (<=256, d\n+ 0x003e7e98 65666175 6c743d33 31290a09 2d6e2069 efault=31)..-n i\n+ 0x003e7ea8 6e740909 4966203e 303a206d 696e696d nt..If >0: minim\n+ 0x003e7eb8 756d206e 756d6265 72206f66 206b2d6d um number of k-m\n+ 0x003e7ec8 65722062 61697473 206e6565 64656420 er baits needed \n+ 0x003e7ed8 28646566 61756c74 3d31290a 09090949 (default=1)....I\n+ 0x003e7ee8 66203c3d 303a2061 6c6c6f77 6564206e f <=0: allowed n\n+ 0x003e7ef8 756d6265 72206f66 206d6973 73656420 umber of missed \n+ 0x003e7f08 6b6d6572 73206f76 65722073 65717565 kmers over seque\n+ 0x003e7f18 6e63650a 09090920 20202020 2020206c nce.... l\n+ 0x003e7f28 656e6774 680a0000 0a092d64 0909446f ength.....-d..Do\n+ 0x003e7f38 206e6f74 20757365 206b6d65 72732077 not use kmers w\n+ 0x003e7f48 69746820 6d696372 6f726570 65617473 ith microrepeats\n+ 0x003e7f58 20284455 53542d6c 696b652c 20736565 (DUST-like, see\n+ 0x003e7f68 20616c73 6f202d44 290a092d 4420696e also -D)..-D in\n+ 0x003e7f78 74090953 6574206c 656e6774 68206f66 t..Set length of\n+ 0x003e7f88 206d6963 726f7265 70656174 7320696e microrepeats in\n+ 0x003e7f98 206b6d65 72732074 6f206469 73636172 kmers to discar\n+ 0x003e7fa8 64206672 6f6d2062 6169742e 0a090909 d from bait.....\n+ 0x003e7fb8 20696e74 203e2030 206d6963 726f7265 int > 0 microre\n+ 0x003e7fc8 70656174 206c656e 20696e20 70657263 peat len in perc\n+ 0x003e7fd8 656e7461 6765206f 66206b6d 6572206c entage of kmer l\n+ 0x003e7fe8 656e6774 682e0a09 09092020 20202020 ength..... \n+ 0x003e7ff8 20452e67 2e3a202d 6b203137 202d4420 E.g.: -k 17 -D \n+ 0x003e8008 3637202d 2d3e2031 312e3339 20626173 67 --> 11.39 bas\n+ 0x003e8018 6573202d 2d3e2031 32206261 7365732e es --> 12 bases.\n+ 0x003e8028 0a090909 20696e74 203c2030 206d6963 .... int < 0 mic\n+ 0x003e8038 726f7265 70656174 206c656e 20696e20 rorepeat len in \n+ 0x003e8048 62617365 732e0a09 09092069 6e742021 bases..... int !\n+ 0x003e8058 3d203020 696d706c 69657320 2d642c20 = 0 implies -d, \n+ 0x003e8068 696e743d 30207475 726e7320 44555354 int=0 turns DUST\n+ 0x003e8078 2066696c 74657220 6f66662e 0a092d69 filter off...-i\n+ 0x003e8088 09095365 6c656374 73207365 7175656e ..Selects sequen\n+ 0x003e8098 63657320 74686174 20646f20 6e6f7420 ces that do not \n+ 0x003e80a8 68697420 62616974 0a092d49 09095365 hit bait..-I..Se\n+ 0x003e80b8 6c656374 73207365 7175656e 63657320 lects sequences \n+ 0x003e80c8 74686174 20686974 20616e64 20646f20 that hit and do \n+ 0x003e80d8 6e6f7420 68697420 62616974 2028746f not hit bait (to\n+ 0x003e80e8 0a090909 20646966 66657265 6e742066 .... different f\n+ 0x003e80f8 696c6573 290a092d 7209094e 6f206368 iles)..-r..No ch\n+ 0x003e8108 65636b69 6e67206f 66207265 76657273 ecking of revers\n+ 0x003e8118 6520636f 6d706c65 6d656e74 20646972 e complement dir\n+ 0x003e8128 65637469 6f6e0a09 2d740909 4e756d62 ection..-t..Numb\n+ 0x003e8138 6572206f 66207468 72656164 7320746f er of threads to\n+ 0x003e8148 20757365 20286465 6661756c 743d3020 use (default=0 \n+ 0x003e8158 2d3e2075 7020746f 20342043 50552063 -> up to 4 CPU c\n+ 0x003e8168 6f726573 290a0000 0a4f7074 696f6e73 ores)....Options\n+ 0x003e8178 20666f72 206f7574 70757420 64656669 for output defi\n+ 0x003e8188 6e697469 6f6e3a0a 00000000 4e6f726d nition:.....Norm\n+ 0x003e8198 616c6c79 206d6972 61626169 74207772 ally mirabait wr\n+ 0x003e81a8 69746573 20736570 61726174 65207265 ites separate re\n+ 0x003e81b8 73756c74 2066696c 65732028 6e616d65 sult files (name\n+ 0x003e81c8 64202762 6169745f 6d617463 685f2a27 d 'bait_match_*'\n+ 0x003e81d8 20616e64 20276261 69745f6d 6973735f and 'bait_miss_\n+ 0x003e81e8 2a272920 666f7220 65616368 20696e70 *') for each inp\n+ 0x003e81f8 75742074 6f207468 65206375 7272656e ut to the curren\n+ 0x003e8208 74206469 72656374 6f72792e 20466f72 t directory. For\n+ 0x003e8218 20636861 6e67696e 67207468 69732062 changing this b\n+ 0x003e8228 65686176 696f7572 20616e64 206f7468 ehaviour and oth\n+ 0x003e8238 65722072 656c6174 696e6720 746f206f er relating to o\n+ 0x003e8248 75747075 742c2075 73652074 68657365 utput, use these\n+ 0x003e8258 206f7074 696f6e73 3a0a0000 092d6309 options:....-c.\n+ 0x003e8268 094e6f20 63617365 20636861 6e676520 .No case change \n+ 0x003e8278 6f662073 65717565 6e636520 746f2064 of sequence to d\n+ 0x003e8288 656e6f74 65206261 69742068 6974730a enote bait hits.\n+ 0x003e8298 00000000 092d6c20 696e7409 096c656e .....-l int..len\n+ 0x003e82a8 67746820 6f662061 206c696e 65202846 gth of a line (F\n+ 0x003e82b8 41535441 206f6e6c 792c2064 65666175 ASTA only, defau\n+ 0x003e82c8 6c742030 3d756e6c 696d6974 6564290a lt 0=unlimited).\n+ 0x003e82d8 00000000 092d4b20 66696c65 09095361 .....-K file..Sa\n+ 0x003e82e8 7665206b 6d657220 73746174 69737469 ve kmer statisti\n+ 0x003e82f8 63732074 6f202766 696c6527 20287365 cs to 'file' (se\n+ 0x003e8308 6520616c 736f202d 42290a00 092d4e20 e also -B)...-N \n+ 0x003e8318 6e616d65 09094368 616e6765 20746865 name..Change the\n+ 0x003e8328 20707265 66697820 27626169 74272074 prefix 'bait' t\n+ 0x003e8338 6f203c6e 616d653e 0a090909 20486173 o .... Has\n+ 0x003e8348 206e6f20 65666665 63742069 66202d6f no effect if -o\n+ 0x003e8358 2f2d4f20 69732075 73656420 616e6420 /-O is used and \n+ 0x003e8368 74617267 65747320 61726520 6e6f740a targets are not.\n+ 0x003e8378 09090920 64697265 63746f72 6965730a ... directories.\n+ 0x003e8388 00000000 092d6f20 3c706174 683e0953 .....-o .S\n+ 0x003e8398 61766520 73657175 656e6365 73206d61 ave sequences ma\n+ 0x003e83a8 74636869 6e672062 61697420 746f2070 tching bait to p\n+ 0x003e83b8 6174680a 09090920 49662070 61746820 ath.... If path \n+ 0x003e83c8 69732061 20646972 6563746f 72792c20 is a directory, \n+ 0x003e83d8 77726974 65207365 70617261 74652066 write separate f\n+ 0x003e83e8 696c6573 20696e74 6f207468 69730a09 iles into this..\n+ 0x003e83f8 09092064 69726563 746f7279 2e204966 .. directory. If\n+ 0x003e8408 206e6f74 2c20636f 6d62696e 6520616c not, combine al\n+ 0x003e8418 6c206d61 74636869 6e672073 65717565 l matching seque\n+ 0x003e8428 6e636573 2066726f 6d0a0909 09207468 nces from.... th\n+ 0x003e8438 6520696e 70757420 66696c65 28732920 e input file(s) \n+ 0x003e8448 696e746f 20612073 696e676c 65206669 into a single fi\n+ 0x003e8458 6c652073 70656369 66696564 20627920 le specified by \n+ 0x003e8468 7468650a 09090920 70617468 2e0a0000 the.... path....\n+ 0x003e8478 092d4f20 3c706174 683e094c 696b6520 .-O .Like \n+ 0x003e8488 2d6f2c20 62757420 666f7220 73657175 -o, but for sequ\n+ 0x003e8498 656e6365 73206e6f 74206d61 74636869 ences not matchi\n+ 0x003e84a8 6e670a00 0a4f7468 6572206f 7074696f ng...Other optio\n+ 0x003e84b8 6e733a0a 00000000 092d5420 64697209 ns:......-T dir.\n+ 0x003e84c8 09557365 20276469 72272061 73206469 .Use 'dir' as di\n+ 0x003e84d8 72656374 6f727920 666f7220 74656d70 rectory for temp\n+ 0x003e84e8 6f726172 79206669 6c657320 696e7374 orary files inst\n+ 0x003e84f8 65616420 6f660a09 09092063 75727265 ead of.... curre\n+ 0x003e8508 6e742077 6f726b69 6e672064 69726563 nt working direc\n+ 0x003e8518 746f7279 2e0a0000 092d6d20 696e7465 tory.....-m inte\n+ 0x003e8528 67657209 4d656d6f 72792074 6f207573 ger.Memory to us\n+ 0x003e8538 6520666f 7220636f 6d707574 696e6720 e for computing \n+ 0x003e8548 6b6d6572 20737461 74697374 6963730a kmer statistics.\n+ 0x003e8558 09090920 302e2e31 3030203d 20757365 ... 0..100 = use\n+ 0x003e8568 20706572 63656e74 61676520 6f662066 percentage of f\n+ 0x003e8578 72656520 73797374 656d206d 656d6f72 ree system memor\n+ 0x003e8588 790a0909 09203e31 3030203d 20616d6f y.... >100 = amo\n+ 0x003e8598 756e7420 6f66204d 69422074 6f207573 unt of MiB to us\n+ 0x003e85a8 65202865 2e672e20 31363338 3420666f e (e.g. 16384 fo\n+ 0x003e85b8 72203136 20476942 290a0909 09204465 r 16 GiB).... De\n+ 0x003e85c8 6661756c 74203735 20283735 25206f66 fault 75 (75% of\n+ 0x003e85d8 20667265 65207379 7374656d 206d656d free system mem\n+ 0x003e85e8 6f727929 2e0a0000 0a446566 696e696e ory).....Definin\n+ 0x003e85f8 67206669 6c657320 74797065 7320746f g files types to\n+ 0x003e8608 206c6f61 642f7361 76653a0a 00000000 load/save:.....\n+ 0x003e8618 4e6f726d 616c6c79 206d6972 61626169 Normally mirabai\n+ 0x003e8628 74207265 636f676e 69736573 20746865 t recognises the\n+ 0x003e8638 2066696c 65207479 70657320 6163636f file types acco\n+ 0x003e8648 7264696e 6720746f 20746865 2066696c rding to the fil\n+ 0x003e8658 65206578 74656e73 696f6e20 28657665 e extension (eve\n+ 0x003e8668 6e207768 656e2070 61636b65 64292e20 n when packed). \n+ 0x003e8678 496e2063 61736573 20796f75 206e6565 In cases you nee\n+ 0x003e8688 6420746f 20666f72 63652061 20636572 d to force a cer\n+ 0x003e8698 7461696e 2066696c 65207479 70652062 tain file type b\n+ 0x003e86a8 65636175 73652074 68652066 696c6520 ecause the file \n+ 0x003e86b8 65787465 6e73696f 6e206973 206e6f6e extension is non\n+ 0x003e86c8 2d737461 6e646172 642c2075 73652074 -standard, use t\n+ 0x003e86d8 68652045 4d424f53 53206e6f 74617469 he EMBOSS notati\n+ 0x003e86e8 6f6e2074 6f20666f 72636520 61207479 on to force a ty\n+ 0x003e86f8 70653a20 3c66696c 65747970 653e3a3a pe: ::\n+ 0x003e8708 3c6e616d 655f6f66 5f66696c 653e2e20 . \n+ 0x003e8718 452e672e 2c20746f 2074656c 6c207468 E.g., to tell th\n+ 0x003e8728 61742022 736f6d65 66696c65 2e646174 at \"somefile.dat\n+ 0x003e8738 22206973 20464153 54512c20 7573653a \" is FASTQ, use:\n+ 0x003e8748 20666173 74713a3a 736f6d65 66696c65 fastq::somefile\n+ 0x003e8758 2e646174 0a526563 6f676e69 73656420 .dat.Recognised \n+ 0x003e8768 74797065 73206172 653a2063 61662c20 types are: caf, \n+ 0x003e8778 66617374 612c2066 61737471 2c206762 fasta, fastq, gb\n+ 0x003e8788 662c2067 626b2c20 67626666 2c206d61 f, gbk, gbff, ma\n+ 0x003e8798 6620616e 64207068 642e0a0a 4d495241 f and phd...MIRA\n+ 0x003e87a8 42414954 2077696c 6c207772 69746520 BAIT will write \n+ 0x003e87b8 66696c65 7320696e 20746865 2073616d files in the sam\n+ 0x003e87c8 65206669 6c652074 79706520 61732074 e file type as t\n+ 0x003e87d8 68652063 6f727265 73706f6e 64696e67 he corresponding\n+ 0x003e87e8 20696e70 75742066 696c6573 2e000000 input files....\n+ 0x003e87f8 0a457861 6d706c65 733a0a20 206d6972 .Examples:. mir\n+ 0x003e8808 61626169 74202d62 20622e66 61737461 abait -b b.fasta\n+ 0x003e8818 2066696c 652e6661 7374710a 20206d69 file.fastq. mi\n+ 0x003e8828 72616261 6974202d 49202d6a 2072726e rabait -I -j rrn\n+ 0x003e8838 61202d70 2066696c 655f312e 66617374 a -p file_1.fast\n+ 0x003e8848 71206669 6c655f32 2e666173 74710a20 q file_2.fastq. \n+ 0x003e8858 206d6972 61626169 74202d62 2062312e mirabait -b b1.\n+ 0x003e8868 66617374 61202d62 2062322e 67626b20 fasta -b b2.gbk \n+ 0x003e8878 66696c65 2e666173 74710a20 206d6972 file.fastq. mir\n+ 0x003e8888 61626169 74202d62 20666173 74613a3a abait -b fasta::\n+ 0x003e8898 62616974 732e6461 74202d70 20666173 baits.dat -p fas\n+ 0x003e88a8 74713a3a 66696c65 5f312e64 61742066 tq::file_1.dat f\n+ 0x003e88b8 61737471 3a3a6669 6c655f32 2e646174 astq::file_2.dat\n+ 0x003e88c8 0a20206d 69726162 61697420 2d622062 . mirabait -b b\n+ 0x003e88d8 2e666173 7461202d 70206669 6c655f31 .fasta -p file_1\n+ 0x003e88e8 2e666173 74712066 696c655f 322e6661 .fastq file_2.fa\n+ 0x003e88f8 73747120 2d502066 696c6533 2e666173 stq -P file3.fas\n+ 0x003e8908 74612066 696c6534 2e636166 0a20206d ta file4.caf. m\n+ 0x003e8918 69726162 61697420 2d49202d 6220622e irabait -I -b b.\n+ 0x003e8928 66617374 61202d70 2066696c 655f312e fasta -p file_1.\n+ 0x003e8938 66617374 71206669 6c655f32 2e666173 fastq file_2.fas\n+ 0x003e8948 7471202d 50206669 6c65332e 66617374 tq -P file3.fast\n+ 0x003e8958 61206669 6c65342e 6361660a 20206d69 a file4.caf. mi\n+ 0x003e8968 72616261 6974202d 6b203237 202d6e20 rabait -k 27 -n \n+ 0x003e8978 3130202d 6220622e 66617374 61206669 10 -b b.fasta fi\n+ 0x003e8988 6c652e66 61737471 0a20206d 69726162 le.fastq. mirab\n+ 0x003e8998 61697420 2d622066 61737461 3a3a622e ait -b fasta::b.\n+ 0x003e89a8 64617420 66617374 713a3a66 696c652e dat fastq::file.\n+ 0x003e89b8 6461740a 20206d69 72616261 6974202d dat. mirabait -\n+ 0x003e89c8 6f202f64 65762f73 686d2f20 2d622062 o /dev/shm/ -b b\n+ 0x003e89d8 2e666173 7461202d 70206669 6c655f31 .fasta -p file_1\n+ 0x003e89e8 2e666173 74712066 696c655f 322e6661 .fastq file_2.fa\n+ 0x003e89f8 7374710a 20206d69 72616261 6974202d stq. mirabait -\n+ 0x003e8a08 6f202f64 65762f73 686d2f6d 61746368 o /dev/shm/match\n+ 0x003e8a18 202d6220 622e6661 73746120 2d702066 -b b.fasta -p f\n+ 0x003e8a28 696c655f 312e6661 73747120 66696c65 ile_1.fastq file\n+ 0x003e8a38 5f322e66 61737471 0a20206d 69726162 _2.fastq. mirab\n+ 0x003e8a48 61697420 2d622068 756d616e 5f67656e ait -b human_gen\n+ 0x003e8a58 6f6d652e 66617374 61202d4b 2048475f ome.fasta -K HG_\n+ 0x003e8a68 6b6d6572 73746174 732e6d68 732e677a kmerstats.mhs.gz\n+ 0x003e8a78 202d7020 66696c65 312e6661 73747120 -p file1.fastq \n+ 0x003e8a88 66696c65 322e6661 7374710a 20206d69 file2.fastq. mi\n+ 0x003e8a98 72616261 6974202d 42204847 5f6b6d65 rabait -B HG_kme\n+ 0x003e8aa8 72737461 74732e6d 68732e67 7a202d70 rstats.mhs.gz -p\n+ 0x003e8ab8 2066696c 65312e66 61737471 2066696c file1.fastq fil\n+ 0x003e8ac8 65322e66 61737471 0a20206d 69726162 e2.fastq. mirab\n+ 0x003e8ad8 61697420 2d64202d 42204847 5f6b6d65 ait -d -B HG_kme\n+ 0x003e8ae8 72737461 74732e6d 68732e67 7a202d70 rstats.mhs.gz -p\n+ 0x003e8af8 2066696c 65312e66 61737471 2066696c file1.fastq fil\n+ 0x003e8b08 65322e66 61737471 0a000000 62617369 e2.fastq....basi\n+ 0x003e8b18 635f7374 72696e67 3a3a6170 70656e64 c_string::append\n+ 0x003e8b28 00000000 5f6d6174 63685f00 5f6d6973 ...._match_._mis\n+ 0x003e8b38 735f0000 0a0a436f 756c6420 6e6f7420 s_....Could not \n+ 0x003e8b48 6f70656e 20000000 2e0a446f 65732074 open .....Does t\n+ 0x003e8b58 68652070 61746820 65786973 742c2069 he path exist, i\n+ 0x003e8b68 73206974 20777269 7461626c 653f2049 s it writable? I\n+ 0x003e8b78 73207468 65206469 736b2066 756c6c3f s the disk full?\n+ 0x003e8b88 00000000 2c20736f 7274696e 67000000 ...., sorting...\n+ 0x003e8b98 2c206669 6c746572 696e6700 2b2b2b20 , filtering.+++ \n+ 0x003e8ba8 6d617463 68657320 746f2000 2d2d2d20 matches to .--- \n+ 0x003e8bb8 6e6f6e2d 6d617463 68657320 746f2000 non-matches to .\n+ 0x003e8bc8 556d6d6d 202e2e2e 20756e6b 6e6f776e Ummm ... unknown\n+ 0x003e8bd8 20706169 72737461 74757320 00000000 pairstatus ....\n+ 0x003e8be8 766f6964 204d6972 61426169 743a3a73 void MiraBait::s\n+ 0x003e8bf8 61766557 51756575 65456c65 6d656e74 aveWQueueElement\n+ 0x003e8c08 28777175 65756575 6e69745f 74202620 (wqueueunit_t & \n+ 0x003e8c18 77717529 00000000 4c6f6164 696e6720 wqu)....Loading \n+ 0x003e8c28 64617461 2066726f 6d200000 2e717561 data from ...qua\n+ 0x003e8c38 6c000000 66617374 616e6f71 75616c00 l...fastanoqual.\n+ 0x003e8c48 7b686364 69497050 7276613a 623a423a {hcdiIpPrva:b:B:\n+ 0x003e8c58 443a6a3a 6b3a4b3a 6c3a6d3a 6e3a4e3a D:j:k:K:l:m:n:N:\n+ 0x003e8c68 6f3a4f3a 743a543a 00000000 2d44206d o:O:t:T:....-D m\n+ 0x003e8c78 75737420 6265203e 2d313030 3020616e ust be >-1000 an\n+ 0x003e8c88 64203c3d 20313030 20696e20 74686520 d <= 100 in the \n+ 0x003e8c98 706f7369 0a000000 72726e61 00000000 posi....rrna....\n+ 0x003e8ca8 2f66696c 7465725f 64656661 756c745f /filter_default_\n+ 0x003e8cb8 72726e61 2e6d6873 2e677a00 72524e41 rrna.mhs.gz.rRNA\n+ 0x003e8cc8 00000000 466f756e 64202d6a 2072726e ....Found -j rrn\n+ 0x003e8cd8 612e2045 71756976 616c656e 74207365 a. Equivalent se\n+ 0x003e8ce8 7474696e 67733a0a 00000000 2d422000 ttings:.....-B .\n+ 0x003e8cf8 202d6e20 00000000 202d6400 202d4e20 -n .... -d. -N \n+ 0x003e8d08 00000000 596f7520 73706563 69666965 ....You specifie\n+ 0x003e8d18 64202d6a 2072726e 612c2062 7574204d d -j rrna, but M\n+ 0x003e8d28 49524120 636f756c 64206e6f 74206669 IRA could not fi\n+ 0x003e8d38 6e642074 68652064 65666175 6c742072 nd the default r\n+ 0x003e8d48 524e4120 68617368 20737461 74697374 RNA hash statist\n+ 0x003e8d58 69637320 66696c65 20776869 63682073 ics file which s\n+ 0x003e8d68 686f756c 64206265 206c6f63 61746564 hould be located\n+ 0x003e8d78 20617420 00000000 0a546869 73206973 at .....This is\n+ 0x003e8d88 20757375 616c6c79 20746865 20636173 usually the cas\n+ 0x003e8d98 65207768 656e2079 6f752066 6f72676f e when you forgo\n+ 0x003e8da8 7420746f 2072756e 20746865 20736372 t to run the scr\n+ 0x003e8db8 69707420 746f2069 6e737461 6c6c2074 ipt to install t\n+ 0x003e8dc8 68652072 524e4120 64617461 2066726f he rRNA data fro\n+ 0x003e8dd8 6d207468 65204d49 52412070 61636b61 m the MIRA packa\n+ 0x003e8de8 67652e0a 0a576861 7420746f 20646f3a ge...What to do:\n+ 0x003e8df8 0a2d2069 6620796f 7520696e 7374616c .- if you instal\n+ 0x003e8e08 6c656420 66726f6d 20736f75 7263653a led from source:\n+ 0x003e8e18 20757365 20746865 20276d61 6b652069 use the 'make i\n+ 0x003e8e28 6e737461 6c6c2720 66756e63 74696f6e nstall' function\n+ 0x003e8e38 616c6974 792e0a2d 20696620 796f7520 ality..- if you \n+ 0x003e8e48 696e7374 616c6c65 64206672 6f6d2061 installed from a\n+ 0x003e8e58 20707265 636f6d70 696c6564 2062696e precompiled bin\n+ 0x003e8e68 61726965 73207061 636b6167 653a2067 aries package: g\n+ 0x003e8e78 6f20746f 20746865 20276462 696e7374 o to the 'dbinst\n+ 0x003e8e88 616c6c27 20646972 6563746f 72792069 all' directory i\n+ 0x003e8e98 6e207468 61742070 61636b61 67652061 n that package a\n+ 0x003e8ea8 6e642074 7970650a 20202e2f 6d697261 nd type. ./mira\n+ 0x003e8eb8 2d696e73 74616c6c 2d736c73 2d72726e -install-sls-rrn\n+ 0x003e8ec8 612e7368 20726661 6d5f7272 6e612d32 a.sh rfam_rrna-2\n+ 0x003e8ed8 312d3132 2e736c73 2e677a0a 00000000 1-12.sls.gz.....\n+ 0x003e8ee8 696e7420 6d61696e 4d697261 42616974 int mainMiraBait\n+ 0x003e8ef8 28696e74 20617267 632c2063 68617220 (int argc, char \n+ 0x003e8f08 2a2a2061 72677629 00000000 0a556e6b ** argv).....Unk\n+ 0x003e8f18 6e6f776e 206a6f62 202d6a20 00000000 nown job -j ....\n+ 0x003e8f28 0a437572 72656e74 6c79206b 6e6f776e .Currently known\n+ 0x003e8f38 206a6f62 733a2027 72726e61 27000000 jobs: 'rrna'...\n+ 0x003e8f48 4e6f2062 61697420 66696c65 73206465 No bait files de\n+ 0x003e8f58 66696e65 64207669 61202d62 20616e64 fined via -b and\n+ 0x003e8f68 206e6f20 2d422067 6976656e 210a4469 no -B given!.Di\n+ 0x003e8f78 6420796f 75207573 65207468 6520636f d you use the co\n+ 0x003e8f88 6d6d616e 64206c69 6e652066 6f722074 mmand line for t\n+ 0x003e8f98 6865206f 6c64206d 69726162 61697420 he old mirabait \n+ 0x003e8fa8 283c3d20 342e302e 32293f0a 00000000 (<= 4.0.2)?.....\n+ 0x003e8fb8 2d4b2067 6976656e 20616e64 206e6f20 -K given and no \n+ 0x003e8fc8 73657175 656e6365 2066696c 65732c20 sequence files, \n+ 0x003e8fd8 77696c6c 206a7573 74206372 65617465 will just create\n+ 0x003e8fe8 2061206b 6d657220 73746174 69737469 a kmer statisti\n+ 0x003e8ff8 63732066 696c652e 0a000000 4d697373 cs file.....Miss\n+ 0x003e9008 696e6720 66696c65 7320746f 20626169 ing files to bai\n+ 0x003e9018 74207365 7175656e 63657320 66726f6d t sequences from\n+ 0x003e9028 210a0000 556e6b6e 6f776e20 6f722069 !...Unknown or i\n+ 0x003e9038 6c6c6567 616c2066 696c6520 65787465 llegal file exte\n+ 0x003e9048 6e73696f 6e202700 2720696e 2066696c nsion '.' in fil\n+ 0x003e9058 65206e61 6d652000 0a0a436f 756c6420 e name ...Could \n+ 0x003e9068 6e6f7420 72656d6f 76652066 696c6520 not remove file \n+ 0x003e9078 00000000 0a497320 69742077 72697461 .....Is it writa\n+ 0x003e9088 626c653f 00000000 50617273 696e6720 ble?....Parsing \n+ 0x003e9098 73706563 69616c20 4d495241 20706172 special MIRA par\n+ 0x003e90a8 616d6574 6572733a 20000000 4f6b2e0a ameters: ...Ok..\n+ 0x003e90b8 00000000 42616974 696e6720 73657175 ....Baiting sequ\n+ 0x003e90c8 656e6365 73207769 74682061 74206c65 ences with at le\n+ 0x003e90d8 61737420 00000000 20657861 6374206b ast .... exact k\n+ 0x003e90e8 6d657220 6d617463 6865732e 0a000000 mer matches.....\n+ 0x003e90f8 42616974 696e6720 73657175 656e6365 Baiting sequence\n+ 0x003e9108 7320616c 6c6f7769 6e672066 6f722000 s allowing for .\n+ 0x003e9118 206d6973 73656420 6b6d6572 206d6174 missed kmer mat\n+ 0x003e9128 63686573 206f7665 72207468 65207365 ches over the se\n+ 0x003e9138 7175656e 6365206c 656e6774 682e0a00 quence length...\n+ 0x003e9148 2d6b2073 70656369 66696564 206f6e20 -k specified on \n+ 0x003e9158 74686520 636f6d6d 616e6420 6c696e65 the command line\n+ 0x003e9168 20280000 29206973 20646966 66657265 (..) is differe\n+ 0x003e9178 6e742074 68616e20 74686520 6b6d6572 nt than the kmer\n+ 0x003e9188 2073697a 65207361 76656420 28000000 size saved (...\n+ 0x003e9198 2920696e 20746865 20686173 68207374 ) in the hash st\n+ 0x003e91a8 61746973 74696373 2066696c 652e2054 atistics file. T\n+ 0x003e91b8 68697320 69732074 72656174 65642061 his is treated a\n+ 0x003e91c8 73206572 726f722c 20626169 6c696e67 s error, bailing\n+ 0x003e91d8 206f7574 2e000000 53697a65 206f6620 out....Size of \n+ 0x003e91e8 6b6d6572 7320696e 2066696c 65200000 kmers in file ..\n+ 0x003e91f8 536f7272 792c2074 6865206d 61782e20 Sorry, the max. \n+ 0x003e9208 6b6d6572 2073697a 65207375 70706f72 kmer size suppor\n+ 0x003e9218 74656420 61746d20 69732032 35362e0a ted atm is 256..\n+ 0x003e9228 00000000 73697a65 6f666861 7368203d ....sizeofhash =\n+ 0x003e9238 3d200000 20697320 72617468 65722075 = .. is rather u\n+ 0x003e9248 6e657870 65637465 642e0000 0a4e4f54 nexpected....NOT\n+ 0x003e9258 49434521 20596f75 20626169 74656420 ICE! You baited \n+ 0x003e9268 73657175 656e6365 73207768 69636820 sequences which \n+ 0x003e9278 68616420 636c6970 70696e67 20696e66 had clipping inf\n+ 0x003e9288 6f726d61 74696f6e 20284341 46206f72 ormation (CAF or\n+ 0x003e9298 204d4146 292e204d 69726162 61697420 MAF). Mirabait \n+ 0x003e92a8 77696c6c 20686176 65206261 69746564 will have baited\n+ 0x003e92b8 202a6f6e 6c792a20 696e2074 68652075 *only* in the u\n+ 0x003e92c8 6e636c69 70706564 20706172 7473206f nclipped parts o\n+ 0x003e92d8 66207468 65207365 7175656e 63657320 f the sequences \n+ 0x003e92e8 28776869 63682061 72652074 686f7567 (which are thoug\n+ 0x003e92f8 68742074 6f207265 70726573 656e7420 ht to represent \n+ 0x003e9308 27676f6f 642c2076 6961626c 65272073 'good, viable' s\n+ 0x003e9318 65717565 6e636529 2e0a0000 0a426169 equence).....Bai\n+ 0x003e9328 74696e67 2070726f 63657373 2066696e ting process fin\n+ 0x003e9338 69736865 642e0a0a 00000000 4e756d62 ished.......Numb\n+ 0x003e9348 6572206f 66206261 69742073 65717565 er of bait seque\n+ 0x003e9358 6e636573 3a202020 00000000 546f7461 nces: ....Tota\n+ 0x003e9368 6c206e75 6d626572 206f6620 73657175 l number of sequ\n+ 0x003e9378 656e6365 73207265 61643a20 00000000 ences read: ....\n+ 0x003e9388 50616972 73206261 69746564 3a200000 Pairs baited: ..\n+ 0x003e9398 25290a00 50616972 73206d69 73736564 %)..Pairs missed\n+ 0x003e93a8 3a200000 556e7061 69726564 20626169 : ..Unpaired bai\n+ 0x003e93b8 7465643a 20000000 556e7061 69726564 ted: ...Unpaired\n+ 0x003e93c8 206d6973 7365643a 20000000 4b6d6572 missed: ...Kmer\n+ 0x003e93d8 20737461 74697374 69637320 66696c65 statistics file\n+ 0x003e93e8 20736176 65642074 6f200000 20616e64 saved to .. and\n+ 0x003e93f8 20697320 72656164 7920746f 20726575 is ready to reu\n+ 0x003e9408 73652076 6961202d 422e0a00 67620000 se via -B...gb..\n+ 0x003e9418 67626600 67626b00 67626666 00000000 gbf.gbk.gbff....\n+ 0x003e9428 70686400 73636166 00000000 626f6f73 phd.scaf....boos\n+ 0x003e9438 743a3a20 6d757465 7820636f 6e737472 t:: mutex constr\n+ 0x003e9448 7563746f 72206661 696c6564 20696e20 uctor failed in \n+ 0x003e9458 70746872 6561645f 6d757465 785f696e pthread_mutex_in\n+ 0x003e9468 69740000 766f6964 204d6972 61426169 it..void MiraBai\n+ 0x003e9478 743a3a64 6f426169 74576974 68485328 t::doBaitWithHS(\n+ 0x003e9488 48617368 53746174 69737469 63733c54 HashStatistics & mbhs)\n+ 0x003e94a8 00000000 7468726f 77000000 6c6f6164 ....throw...load\n+ 0x003e94b8 68736600 52656164 20262052 65616443 hsf.Read & ReadC\n+ 0x003e94c8 6f6e7461 696e6572 3a3a6765 74526561 ontainer::getRea\n+ 0x003e94d8 64287569 6e743332 20696e64 65782900 d(uint32 index).\n+ 0x003e94e8 766f6964 20636865 636b4c69 62457869 void checkLibExi\n+ 0x003e94f8 7374656e 63652867 69645f74 206c6962 stence(gid_t lib\n+ 0x003e9508 69642900 6572726f 723a2069 6e646578 id).error: index\n+ 0x003e9518 20280000 29203e3d 2052435f 706f6f6c (..) >= RC_pool\n+ 0x003e9528 72707472 2e73697a 65282920 28000000 rptr.size() (...\n+ 0x003e9538 6c696269 64200000 203e2052 475f7374 libid .. > RG_st\n+ 0x003e9548 61746963 5f696e66 6f6c6962 2e73697a atic_infolib.siz\n+ 0x003e9558 65282920 00000000 76656374 6f723a3a e() ....vector::\n+ 0x003e9568 5f4d5f64 65666175 6c745f61 7070656e _M_default_appen\n+ 0x003e9578 64000000 76656374 6f723a3a 5f4d5f66 d...vector::_M_f\n+ 0x003e9588 696c6c5f 696e7365 72740000 4c6f6164 ill_insert..Load\n+ 0x003e9598 696e6720 66726f6d 20657869 7374696e ing from existin\n+ 0x003e95a8 67206861 73687374 61742066 696c6520 g hashstat file \n+ 0x003e95b8 2e2e2e20 00000000 646f6e65 2e0a0000 ... ....done....\n+ 0x003e95c8 4572726f 723a206b 6d657220 73697a65 Error: kmer size\n+ 0x003e95d8 20736574 20666f72 206d6972 61626169 set for mirabai\n+ 0x003e95e8 74202800 29206973 206e6f74 20657175 t (.) is not equ\n+ 0x003e95f8 616c2074 6f207468 65206b6d 65722073 al to the kmer s\n+ 0x003e9608 697a6520 6c6f6164 65642066 726f6d20 ize loaded from \n+ 0x003e9618 66696c65 20280000 29210a44 69642079 file (..)!.Did y\n+ 0x003e9628 6f75206b 6e6f7720 796f7520 63616e20 ou know you can \n+ 0x003e9638 6c656176 65206f75 74202d6b 20776865 leave out -k whe\n+ 0x003e9648 6e207573 696e6720 2d423f0a 41626f72 n using -B?.Abor\n+ 0x003e9658 74696e67 210a0000 4e6f202d 6b206769 ting!...No -k gi\n+ 0x003e9668 76656e2c 20757369 6e67206b 2066726f ven, using k fro\n+ 0x003e9678 6d207468 65206c6f 61646564 2066696c m the loaded fil\n+ 0x003e9688 653a2000 5741524e 494e473a 206e6f74 e: .WARNING: not\n+ 0x003e9698 20612073 696e676c 65206b6d 65722062 a single kmer b\n+ 0x003e96a8 61697420 636f756c 64206265 2067656e ait could be gen\n+ 0x003e96b8 65726174 65642e20 54686973 20697320 erated. This is \n+ 0x003e96c8 64756520 746f2074 68652073 65717565 due to the seque\n+ 0x003e96d8 6e636573 20796f75 20617265 20757369 nces you are usi\n+ 0x003e96e8 6e672074 6f206261 69742061 72652061 ng to bait are a\n+ 0x003e96f8 6c6c2065 69746865 7220746f 6f207368 ll either too sh\n+ 0x003e9708 6f727420 6f722063 6f6e7461 696e2074 ort or contain t\n+ 0x003e9718 6f6f206d 616e7920 636c6f73 656c7920 oo many closely \n+ 0x003e9728 6c6f6361 74656420 49555041 4320636f located IUPAC co\n+ 0x003e9738 6465732e 0a546869 73206d61 79206265 des..This may be\n+ 0x003e9748 20726967 68742c20 62757420 6d6f7374 right, but most\n+ 0x003e9758 2070726f 6261626c 79206973 206e6f74 probably is not\n+ 0x003e9768 2e204966 206e6f74 3a206569 74686572 . If not: either\n+ 0x003e9778 20636865 636b2079 6f757220 62616974 check your bait\n+ 0x003e9788 20736571 75656e63 65732069 6e207468 sequences in th\n+ 0x003e9798 6520696e 70757420 66696c65 73206f72 e input files or\n+ 0x003e97a8 2063686f 6f736520 61206c6f 77657220 choose a lower \n+ 0x003e97b8 6b6d6572 2073697a 652e0000 4b4d4552 kmer size...KMER\n+ 0x003e97c8 20737461 74697374 69637320 64757374 statistics dust\n+ 0x003e97d8 65642061 6e642077 616e7473 20736176 ed and wants sav\n+ 0x003e97e8 65202e2e 2e207265 73617669 6e67206e e ... resaving n\n+ 0x003e97f8 6f772e0a 00000000 536f6d65 7468696e ow......Somethin\n+ 0x003e9808 67277320 77726f6e 67206865 72653a20 g's wrong here: \n+ 0x003e9818 2d702073 61797320 746f2065 78706563 -p says to expec\n+ 0x003e9828 74206f6e 65206675 72746865 72206669 t one further fi\n+ 0x003e9838 6c652c20 62757420 00000000 20697320 le, but .... is \n+ 0x003e9848 74686520 6c617374 2066696c 65207365 the last file se\n+ 0x003e9858 656e206f 6e207468 6520636f 6d6d616e en on the comman\n+ 0x003e9868 64206c69 6e653f00 536f6d65 7468696e d line?.Somethin\n+ 0x003e9878 67277320 77726f6e 67206865 72653a20 g's wrong here: \n+ 0x003e9888 2d702073 61797320 796f7520 68617665 -p says you have\n+ 0x003e9898 2074776f 2066696c 65732077 69746820 two files with \n+ 0x003e98a8 72656164 73207061 69726564 20616372 reads paired acr\n+ 0x003e98b8 6f737320 626f7468 2066696c 65732e20 oss both files. \n+ 0x003e98c8 42757420 66696c65 20000000 20646f65 But file ... doe\n+ 0x003e98d8 73206e6f 74206861 76652074 68652073 s not have the s\n+ 0x003e98e8 616d6520 6e756d62 6572206f 66207265 ame number of re\n+ 0x003e98f8 61647320 61732066 696c6520 00000000 ads as file ....\n+ 0x003e9908 50616972 65642065 6e642066 696c6573 Paired end files\n+ 0x003e9918 206e6f74 2073796e 6368726f 6e697365 not synchronise\n+ 0x003e9928 643a2072 65616420 6e616d65 20000000 d: read name ...\n+ 0x003e9938 206e6f74 20657175 616c2074 6f200000 not equal to ..\n+ 0x003e9948 20616e64 2074656d 706c6174 65732061 and templates a\n+ 0x003e9958 6c736f20 646f206e 6f74206d 61746368 lso do not match\n+ 0x003e9968 3a200000 20767320 00000000 496e7465 : .. vs ....Inte\n+ 0x003e9978 726c6561 76656420 70616972 65642065 rleaved paired e\n+ 0x003e9988 6e642066 696c6520 61707061 72656e74 nd file apparent\n+ 0x003e9998 6c79206e 6f742063 6c65616e 6c792069 ly not cleanly i\n+ 0x003e99a8 6e746572 6c656176 65643a20 6c617374 nterleaved: last\n+ 0x003e99b8 20726561 64200000 20646f65 73206e6f read .. does no\n+ 0x003e99c8 74206861 76652061 20706172 746e6572 t have a partner\n+ 0x003e99d8 2e000000 496e7465 726c6561 76656420 ....Interleaved \n+ 0x003e99e8 70616972 65642065 6e642066 696c6520 paired end file \n+ 0x003e99f8 61707061 72656e74 6c79206e 6f742063 apparently not c\n+ 0x003e9a08 6c65616e 6c792069 6e746572 6c656176 leanly interleav\n+ 0x003e9a18 65643a20 72656164 2074656d 706c6174 ed: read templat\n+ 0x003e9a28 65200000 46696c65 2028626c 61322920 e ..File (bla2) \n+ 0x003e9a38 6d6f7265 20726561 64732074 68616e20 more reads than \n+ 0x003e9a48 66696c65 2028626c 61293f3f 3f000000 file (bla)???...\n+ 0x003e9a58 4e35626f 6f737439 65786365 7074696f N5boost9exceptio\n+ 0x003e9a68 6e450000 4e35626f 6f737431 36657863 nE..N5boost16exc\n+ 0x003e9a78 65707469 6f6e5f64 65746169 6c313063 eption_detail10c\n+ 0x003e9a88 6c6f6e65 5f626173 65450000 4e35626f lone_baseE..N5bo\n+ 0x003e9a98 6f737436 73797374 656d3134 6572726f ost6system14erro\n+ 0x003e9aa8 725f6361 7465676f 72794500 4e35626f r_categoryE.N5bo\n+ 0x003e9ab8 6f737436 73797374 656d3664 65746169 ost6system6detai\n+ 0x003e9ac8 6c323267 656e6572 69635f65 72726f72 l22generic_error\n+ 0x003e9ad8 5f636174 65676f72 79450000 4e35626f _categoryE..N5bo\n+ 0x003e9ae8 6f737436 73797374 656d3132 73797374 ost6system12syst\n+ 0x003e9af8 656d5f65 72726f72 45000000 4e35626f em_errorE...N5bo\n+ 0x003e9b08 6f737431 36746872 6561645f 65786365 ost16thread_exce\n+ 0x003e9b18 7074696f 6e450000 4e35626f 6f737432 ptionE..N5boost2\n+ 0x003e9b28 31746872 6561645f 7265736f 75726365 1thread_resource\n+ 0x003e9b38 5f657272 6f724500 4e35626f 6f737431 _errorE.N5boost1\n+ 0x003e9b48 30777261 70657863 65707449 4e535f32 0wrapexceptINS_2\n+ 0x003e9b58 31746872 6561645f 7265736f 75726365 1thread_resource\n+ 0x003e9b68 5f657272 6f724545 45000000 652e6d61 _errorEEE...e.ma\n+ 0x003e9b78 66000000 48555a38 353a3234 31363a31 f...HUZ85:2416:1\n+ 0x003e9b88 37363300 48555a38 353a3135 37383a31 763.HUZ85:1578:1\n+ 0x003e9b98 30323400 2d2d6a6f 623d6465 6e6f766f 024.--job=denovo\n+ 0x003e9ba8 2c67656e 6f6d652c 61636375 72617465 ,genome,accurate\n+ 0x003e9bb8 2c696f6e 746f7200 52656620 00000000 ,iontor.Ref ....\n+ 0x003e9bc8 206e6f74 20696e20 72656164 706f6f6c not in readpool\n+ 0x003e9bd8 3f000000 64626752 65706c61 794d6169 ?...dbgReplayMai\n+ 0x003e9be8 6e000000 4e657720 00000000 6265666f n...New ....befo\n+ 0x003e9bf8 72650a00 72656164 20616464 65640a0a re..read added..\n+ 0x003e9c08 00000000 72656164 206e6f74 20616464 ....read not add\n+ 0x003e9c18 65640a0a 00000000 62616420 6c657869 ed......bad lexi\n+ 0x003e9c28 63616c20 63617374 3a20736f 75726365 cal cast: source\n+ 0x003e9c38 20747970 65207661 6c756520 636f756c type value coul\n+ 0x003e9c48 64206e6f 74206265 20696e74 65727072 d not be interpr\n+ 0x003e9c58 65746564 20617320 74617267 65740000 eted as target..\n+ 0x003e9c68 2d2d6a6f 623d6765 6e6f6d65 2c64656e --job=genome,den\n+ 0x003e9c78 6f766f2c 61636375 72617465 2c736f6c ovo,accurate,sol\n+ 0x003e9c88 65786100 6c6f6164 636c6970 3a200000 exa.loadclip: ..\n+ 0x003e9c98 506f7374 2d6c6f61 6420636c 6970733a Post-load clips:\n+ 0x003e9ca8 0a000000 6d64636c 69705f74 00000000 ....mdclip_t....\n+ 0x003e9cb8 53454152 4348204d 53473a20 50686958 SEARCH MSG: PhiX\n+ 0x003e9cc8 20313734 20666f75 6e643a20 00000000 174 found: ....\n+ 0x003e9cd8 434c4950 204d5347 3a204164 6170746f CLIP MSG: Adapto\n+ 0x003e9ce8 72207269 67687420 666f756e 643a2000 r right found: .\n+ 0x003e9cf8 434c4950 204d5347 3a205061 72746961 CLIP MSG: Partia\n+ 0x003e9d08 6c206164 6170746f 72207269 67687420 l adaptor right \n+ 0x003e9d18 666f756e 643a2000 4c6f6164 696e6720 found: .Loading \n+ 0x003e9d28 64617461 20736574 20000000 20696e74 data set ... int\n+ 0x003e9d38 6f206d65 6d6f7279 3a0a0000 0a446f6e o memory:....Don\n+ 0x003e9d48 650a0000 436c6970 70696e67 20706f6f e...Clipping poo\n+ 0x003e9d58 6c200000 43616c63 756c6174 696e6720 l ..Calculating \n+ 0x003e9d68 68617368 20737461 74697374 69637320 hash statistics \n+ 0x003e9d78 666f7220 706f6f6c 20000000 203a0a00 for pool ... :..\n+ 0x003e9d88 0a446f6e 650a5361 76696e67 202e2e2e .Done.Saving ...\n+ 0x003e9d98 00000000 646f6e65 2e000000 68617368 ....done....hash\n+ 0x003e9da8 20646973 74726962 20000000 63726561 distrib ...crea\n+ 0x003e9db8 74696e67 20737562 68730000 0a232323 ting subhs...###\n+ 0x003e9dc8 23232323 23200000 206e6f74 20000000 ##### .. not ...\n+ 0x003e9dd8 686a3a6b 3a760000 0a417574 686f723a hj:k:v...Author:\n+ 0x003e9de8 09094261 73746965 6e204368 65767265 ..Bastien Chevre\n+ 0x003e9df8 75782028 62616368 40636865 76726575 ux (bach@chevreu\n+ 0x003e9e08 782e6f72 67290a50 7572706f 73653a09 x.org).Purpose:.\n+ 0x003e9e18 68616e64 6c65206b 2d6d6572 20737461 handle k-mer sta\n+ 0x003e9e28 74697374 69637320 6f662061 20646174 tistics of a dat\n+ 0x003e9e38 61207365 740a0a00 55736167 653a0a6d a set...Usage:.m\n+ 0x003e9e48 69726164 69666620 2e2e2e0a 00000000 iradiff ........\n+ 0x003e9e58 6a6f6200 4e35626f 6f737431 36626164 job.N5boost16bad\n+ 0x003e9e68 5f6c6578 6963616c 5f636173 74450000 _lexical_castE..\n+ 0x003e9e78 4e35626f 6f737431 30777261 70657863 N5boost10wrapexc\n+ 0x003e9e88 65707449 4e535f31 36626164 5f6c6578 eptINS_16bad_lex\n+ 0x003e9e98 6963616c 5f636173 74454545 00000000 ical_castEEE....\n+ 0x003e9ea8 4d697373 696e6720 6e616d65 206f6620 Missing name of \n+ 0x003e9eb8 6174206c 65617374 206f6e65 2066696c at least one fil\n+ 0x003e9ec8 652e0a00 55736167 653a2066 696c7465 e...Usage: filte\n+ 0x003e9ed8 72205b5b 6d696e66 77645d20 6d696e72 r [[minfwd] minr\n+ 0x003e9ee8 65765d20 6d696e74 6f74616c 20696e20 ev] mintotal in \n+ 0x003e9ef8 6f75740a 00000000 6d657244 656c7461 out.....merDelta\n+ 0x003e9f08 54657374 28292043 75727265 6e746c79 Test() Currently\n+ 0x003e9f18 2064652d 61637469 76617465 642e0a00 de-activated...\n+ 0x003e9f28 4b6d6572 2073697a 65200000 20776974 Kmer size .. wit\n+ 0x003e9f38 68200000 20627974 65732061 7265206e h .. bytes are n\n+ 0x003e9f48 6f742065 78706563 74656420 68657265 ot expected here\n+ 0x003e9f58 2e0a0000 766f6964 204d6972 614d6572 ....void MiraMer\n+ 0x003e9f68 3a3a6d65 7244756d 70486173 68537461 ::merDumpHashSta\n+ 0x003e9f78 74732869 6e742061 7267632c 20636861 ts(int argc, cha\n+ 0x003e9f88 72202a2a 20617267 76290000 766f6964 r ** argv)..void\n+ 0x003e9f98 204d6972 614d6572 3a3a6d65 7244756d MiraMer::merDum\n+ 0x003e9fa8 70446562 75672869 6e742061 7267632c pDebug(int argc,\n+ 0x003e9fb8 20636861 72202a2a 20617267 76290000 char ** argv)..\n+ 0x003e9fc8 766f6964 204d6972 614d6572 3a3a6d65 void MiraMer::me\n+ 0x003e9fd8 7244756d 70486173 68446973 74726962 rDumpHashDistrib\n+ 0x003e9fe8 28696e74 20617267 632c2063 68617220 (int argc, char \n+ 0x003e9ff8 2a2a2061 72677629 00000000 6d697261 ** argv)....mira\n+ 0x003ea008 6d65722e 6d68732e 677a0000 4d45525f mer.mhs.gz..MER_\n+ 0x003ea018 62617365 73706572 68617368 20000000 basesperhash ...\n+ 0x003ea028 766f6964 204d6972 614d6572 3a3a6d65 void MiraMer::me\n+ 0x003ea038 72437265 61746548 61736853 74617473 rCreateHashStats\n+ 0x003ea048 28696e74 20617267 632c2063 68617220 (int argc, char \n+ 0x003ea058 2a2a2061 72677629 00000000 46696c65 ** argv)....File\n+ 0x003ea068 20000000 0a202046 696c6520 666f726d .... File form\n+ 0x003ea078 61742076 65727369 6f6e3a09 00000000 at version:.....\n+ 0x003ea088 0a20204b 6d657220 6c656e67 74683a09 . Kmer length:.\n+ 0x003ea098 00000000 0a20204b 6d657220 62797465 ..... Kmer byte\n+ 0x003ea0a8 733a0900 0a20204e 756d2e20 6b6d6572 s:... Num. kmer\n+ 0x003ea0b8 733a0900 0a202053 6f727420 73746174 s:... Sort stat\n+ 0x003ea0c8 75733a09 00000000 206e6f74 20726561 us:..... not rea\n+ 0x003ea0d8 6461626c 65206f72 206e6f74 2061206d dable or not a m\n+ 0x003ea0e8 68732066 696c652e 0a000000 4c6f6164 hs file.....Load\n+ 0x003ea0f8 696e6720 6b6d6572 20737461 74697374 ing kmer statist\n+ 0x003ea108 6963732e 00000000 43616c63 756c6174 ics.....Calculat\n+ 0x003ea118 69672066 6f726b73 2e000000 2e726177 ig forks.....raw\n+ 0x003ea128 00000000 2e62796c 656e0000 2e62796d .....bylen...bym\n+ 0x003ea138 68630000 55736167 653a2064 62672069 hc..Usage: dbg i\n+ 0x003ea148 6e206f75 740a0000 6c6f6164 20000000 n out...load ...\n+ 0x003ea158 7472696d 20000000 5f6e6f74 696e5f00 trim ..._notin_.\n+ 0x003ea168 2e666173 74610000 53617669 6e672068 .fasta..Saving h\n+ 0x003ea178 61736865 7320746f 20464153 54412066 ashes to FASTA f\n+ 0x003ea188 696c6520 00000000 53617669 6e672068 ile ....Saving h\n+ 0x003ea198 61736865 7320746f 20746578 74206669 ashes to text fi\n+ 0x003ea1a8 6c652000 55736167 653a0a6d 6972616d le .Usage:.miram\n+ 0x003ea1b8 6572202e 2e2e0a00 20202d6a 202f202d er ..... -j / -\n+ 0x003ea1c8 2d6a6f62 09090909 4a6f6220 74797065 -job....Job type\n+ 0x003ea1d8 2e204375 7272656e 746c793a 0a202020 . Currently:. \n+ 0x003ea1e8 20202020 20202020 20090909 09637265 ....cre\n+ 0x003ea1f8 61746520 28646566 61756c74 290a2020 ate (default). \n+ 0x003ea208 20202020 20202020 20200909 0909696e ....in\n+ 0x003ea218 666f0a20 20202020 20202020 20202009 fo. .\n+ 0x003ea228 09090973 6f72740a 20202020 20202020 ...sort. \n+ 0x003ea238 20202020 09090909 64696666 0a202020 ....diff. \n+ 0x003ea248 20202020 20202020 20090909 0964756d ....dum\n+ 0x003ea258 70636f75 6e74730a 20202020 20202020 pcounts. \n+ 0x003ea268 20202020 09090909 64656275 670a2020 ....debug. \n+ 0x003ea278 20202020 20202020 20200909 09096474 ....dt\n+ 0x003ea288 6573740a 20202020 20202020 20202020 est. \n+ 0x003ea298 09090909 64756d70 64697374 7269620a ....dumpdistrib.\n+ 0x003ea2a8 20202d68 202f202d 2d68656c 70090909 -h / --help...\n+ 0x003ea2b8 09507269 6e742073 686f7274 2068656c .Print short hel\n+ 0x003ea2c8 7020616e 64206578 69740a20 202d7620 p and exit. -v \n+ 0x003ea2d8 2f202d2d 76657273 696f6e09 09095072 / --version...Pr\n+ 0x003ea2e8 696e7420 76657273 696f6e20 616e6420 int version and \n+ 0x003ea2f8 65786974 0a000000 536f7272 792c202d exit....Sorry, -\n+ 0x003ea308 6b20666f 72206b6d 65722073 697a6520 k for kmer size \n+ 0x003ea318 6d757374 20626520 3c3d2032 35362066 must be <= 256 f\n+ 0x003ea328 6f722074 68652074 696d6520 6265696e or the time bein\n+ 0x003ea338 672e0a00 64626700 64756d70 636f756e g...dbg.dumpcoun\n+ 0x003ea348 74730000 64756d70 64697374 72696200 ts..dumpdistrib.\n+ 0x003ea358 66696c74 65720000 696e666f 00000000 filter..info....\n+ 0x003ea368 736f7274 00000000 64656275 67000000 sort....debug...\n+ 0x003ea378 64746573 74000000 3a20756e 6b6e6f77 dtest...: unknow\n+ 0x003ea388 6e206a6f 62202700 273f3f3f 00000000 n job '.'???....\n+ 0x003ea398 57686d4d 7276633a 743a2000 4d697373 WhmMrvc:t: .Miss\n+ 0x003ea3a8 696e6720 64697265 63746f72 79206e61 ing directory na\n+ 0x003ea3b8 6d652066 6f72206f 7074696f 6e202d63 me for option -c\n+ 0x003ea3c8 202f202d 2d637764 3d000000 6d697261 / --cwd=...mira\n+ 0x003ea3d8 7062636f 72726563 74090000 6d697261 pbcorrect...mira\n+ 0x003ea3e8 09090000 4d495241 4c494220 76657273 ....MIRALIB vers\n+ 0x003ea3f8 696f6e20 00000000 0a417574 686f723a ion .....Author:\n+ 0x003ea408 09094261 73746965 6e204368 65767265 ..Bastien Chevre\n+ 0x003ea418 75782028 62616368 40636865 76726575 ux (bach@chevreu\n+ 0x003ea428 782e6f72 67290a00 50757270 6f73653a x.org)..Purpose:\n+ 0x003ea438 09636f72 72656374 206c6f77 20717561 .correct low qua\n+ 0x003ea448 6c697479 20506163 42696f20 73657175 lity PacBio sequ\n+ 0x003ea458 656e6369 6e672064 6174612e 0a0a0000 encing data.....\n+ 0x003ea468 50757270 6f73653a 09617373 656d626c Purpose:.assembl\n+ 0x003ea478 65207365 7175656e 63696e67 20646174 e sequencing dat\n+ 0x003ea488 612e0a0a 00000000 55736167 653a0a00 a.......Usage:..\n+ 0x003ea498 205b6f70 74696f6e 735d206d 616e6966 [options] manif\n+ 0x003ea4a8 6573745f 66696c65 205b6d61 6e696665 est_file [manife\n+ 0x003ea4b8 73745f66 696c6520 2e2e2e5d 0a000000 st_file ...]....\n+ 0x003ea4c8 20202d63 202f202d 2d637764 3d090964 -c / --cwd=..d\n+ 0x003ea4d8 69726563 746f7279 09436861 6e676520 irectory.Change \n+ 0x003ea4e8 776f726b 696e6720 64697265 63746f72 working director\n+ 0x003ea4f8 790a0000 20202d6d 202f202d 2d6d6368 y... -m / --mch\n+ 0x003ea508 65636b09 0909094f 6e6c7920 63686563 eck....Only chec\n+ 0x003ea518 6b207468 65206d61 6e696665 73742066 k the manifest f\n+ 0x003ea528 696c652c 20746865 6e206578 69742e0a ile, then exit..\n+ 0x003ea538 20202d4d 202f202d 2d6d6463 6865636b -M / --mdcheck\n+ 0x003ea548 0909094c 696b6520 2d6d2c20 62757420 ...Like -m, but \n+ 0x003ea558 616c736f 20636865 636b2065 78697374 also check exist\n+ 0x003ea568 656e6365 206f660a 09090909 09206461 ence of...... da\n+ 0x003ea578 74612066 696c6573 2e0a2020 2d72202f ta files.. -r /\n+ 0x003ea588 202d2d72 6573756d 65090909 09526573 --resume....Res\n+ 0x003ea598 756d6520 616e2069 6e746572 72757074 ume an interrupt\n+ 0x003ea5a8 65642061 7373656d 626c790a 00000000 ed assembly.....\n+ 0x003ea5b8 20202d68 202f202d 2d68656c 70090909 -h / --help...\n+ 0x003ea5c8 09507269 6e742073 686f7274 2068656c .Print short hel\n+ 0x003ea5d8 7020616e 64206578 69740a20 202d6d20 p and exit. -m \n+ 0x003ea5e8 2f202d2d 6d636865 636b0909 09094f6e / --mcheck....On\n+ 0x003ea5f8 6c792063 6865636b 20746865 206d616e ly check the man\n+ 0x003ea608 69666573 74206669 6c652c20 7468656e ifest file, then\n+ 0x003ea618 20657869 742e0a20 202d4d20 2f202d2d exit.. -M / --\n+ 0x003ea628 6d646368 65636b09 09094c69 6b65202d mdcheck...Like -\n+ 0x003ea638 6d2c2062 75742061 6c736f20 63686563 m, but also chec\n+ 0x003ea648 6b206578 69737465 6e636520 6f660a09 k existence of..\n+ 0x003ea658 09090909 20646174 61206669 6c65732e .... data files.\n+ 0x003ea668 0a20202d 72202f20 2d2d7265 73756d65 . -r / --resume\n+ 0x003ea678 09090909 52657375 6d652f72 65737461 ....Resume/resta\n+ 0x003ea688 72742061 6e20696e 74657272 75707465 rt an interrupte\n+ 0x003ea698 64206173 73656d62 6c790a20 202d7420 d assembly. -t \n+ 0x003ea6a8 2f202d2d 74687265 6164733d 09696e74 / --threads=.int\n+ 0x003ea6b8 65676572 0909466f 72636520 6e756d62 eger..Force numb\n+ 0x003ea6c8 6572206f 66207468 72656164 7320286f er of threads (o\n+ 0x003ea6d8 76657272 69646573 0a090909 09092065 verrides...... e\n+ 0x003ea6e8 71756976 616c656e 74202d47 453a6e6f quivalent -GE:no\n+ 0x003ea6f8 74206d61 6e696665 73742065 6e747279 t manifest entry\n+ 0x003ea708 290a2020 2d76202f 202d2d76 65727369 ). -v / --versi\n+ 0x003ea718 6f6e0909 09507269 6e742076 65727369 on...Print versi\n+ 0x003ea728 6f6e2061 6e642065 7869740a 00000000 on and exit.....\n+ 0x003ea738 4974206c 6f6f6b73 206c696b 6520796f It looks like yo\n+ 0x003ea748 75206172 65207573 696e6720 74686520 u are using the \n+ 0x003ea758 6f6c6420 636f6d6d 616e6420 6c696e65 old command line\n+ 0x003ea768 20666f72 6d617420 6f66204d 49524120 format of MIRA \n+ 0x003ea778 332e342e 7820616e 64206561 726c6965 3.4.x and earlie\n+ 0x003ea788 722e0a50 6c656173 65206c6f 6f6b2075 r..Please look u\n+ 0x003ea798 7020696e 20746865 206d616e 75616c20 p in the manual \n+ 0x003ea7a8 6f6e2068 6f772074 6f207573 65206d61 on how to use ma\n+ 0x003ea7b8 6e696665 73742066 696c6573 20666f72 nifest files for\n+ 0x003ea7c8 204d4952 4120332e 392e7820 616e6420 MIRA 3.9.x and \n+ 0x003ea7d8 6c617465 722e0a00 596f7520 64696420 later...You did \n+ 0x003ea7e8 6e6f7420 73706563 69667920 61206d61 not specify a ma\n+ 0x003ea7f8 6e696665 73742066 696c6520 746f206c nifest file to l\n+ 0x003ea808 6f61643f 0a000000 54686973 20697320 oad?....This is \n+ 0x003ea818 4d495241 20000000 506c6561 73652063 MIRA ...Please c\n+ 0x003ea828 6974653a 20436865 76726575 782c2042 ite: Chevreux, B\n+ 0x003ea838 2e2c2057 65747465 722c2054 2e20616e ., Wetter, T. an\n+ 0x003ea848 64205375 6861692c 20532e20 28313939 d Suhai, S. (199\n+ 0x003ea858 39292c20 47656e6f 6d652053 65717565 9), Genome Seque\n+ 0x003ea868 6e63650a 41737365 6d626c79 20557369 nce.Assembly Usi\n+ 0x003ea878 6e672054 72616365 20536967 6e616c73 ng Trace Signals\n+ 0x003ea888 20616e64 20416464 6974696f 6e616c20 and Additional \n+ 0x003ea898 53657175 656e6365 20496e66 6f726d61 Sequence Informa\n+ 0x003ea8a8 74696f6e 2e0a436f 6d707574 65722053 tion..Computer S\n+ 0x003ea8b8 6369656e 63652061 6e642042 696f6c6f cience and Biolo\n+ 0x003ea8c8 67793a20 50726f63 65656469 6e677320 gy: Proceedings \n+ 0x003ea8d8 6f662074 68652047 65726d61 6e20436f of the German Co\n+ 0x003ea8e8 6e666572 656e6365 206f6e0a 42696f69 nference on.Bioi\n+ 0x003ea8f8 6e666f72 6d617469 63732028 47434229 nformatics (GCB)\n+ 0x003ea908 2039392c 2070702e 2034352d 35362e0a 99, pp. 45-56..\n+ 0x003ea918 0a000000 4368616e 67696e67 20776f72 ....Changing wor\n+ 0x003ea928 6b696e67 20646972 6563746f 72792074 king directory t\n+ 0x003ea938 6f202700 27206661 696c6564 2c207379 o '.' failed, sy\n+ 0x003ea948 7374656d 206d6573 73616765 2069733a stem message is:\n+ 0x003ea958 20000000 0a4d616e 69666573 74206c6f ....Manifest lo\n+ 0x003ea968 6f6b7320 4f4b0000 20616e64 20746865 oks OK.. and the\n+ 0x003ea978 20646174 61206669 6c657320 72656665 data files refe\n+ 0x003ea988 72656e63 65642077 69746869 6e207765 renced within we\n+ 0x003ea998 72652066 6f756e64 00000000 42696e61 re found....Bina\n+ 0x003ea9a8 72793a20 00000000 4f6f6f6f 6f6f7073 ry: ....Oooooops\n+ 0x003ea9b8 3f20596f 75206361 6c6c6564 20746865 ? You called the\n+ 0x003ea9c8 20276d69 72612720 65786563 75746162 'mira' executab\n+ 0x003ea9d8 6c652062 75742068 61766520 70617261 le but have para\n+ 0x003ea9e8 6d657465 72732073 65742066 6f722074 meters set for t\n+ 0x003ea9f8 68654553 542d534e 502d5365 61726368 heEST-SNP-Search\n+ 0x003eaa08 20706970 656c696e 65207365 742e2046 pipeline set. F\n+ 0x003eaa18 6f722074 6869732c 20796f75 20686176 or this, you hav\n+ 0x003eaa28 6520746f 20757365 20746865 20276d69 e to use the 'mi\n+ 0x003eaa38 72615365 61726368 45535453 4e507327 raSearchESTSNPs'\n+ 0x003eaa48 65786563 75746162 6c652028 736f7272 executable (sorr\n+ 0x003eaa58 79292e00 766f6964 206d6972 6128696e y)..void mira(in\n+ 0x003eaa68 74206172 67632c20 63686172 202a2a20 t argc, char ** \n+ 0x003eaa78 61726776 29000000 0a506172 616d6574 argv)....Paramet\n+ 0x003eaa88 65727320 70617273 65642077 6974686f ers parsed witho\n+ 0x003eaa98 75742065 72726f72 2c207065 72666563 ut error, perfec\n+ 0x003eaaa8 742e0a00 4f766572 72696469 6e67206e t...Overriding n\n+ 0x003eaab8 756d6265 72206f66 20746872 65616473 umber of threads\n+ 0x003eaac8 20766961 20272d74 27207769 74682000 via '-t' with .\n+ 0x003eaad8 0a0a456e 64206f66 20617373 656d626c ..End of assembl\n+ 0x003eaae8 79207072 6f636573 732c2074 68616e6b y process, thank\n+ 0x003eaaf8 20796f75 20666f72 20757369 6e67204d you for using M\n+ 0x003eab08 4952412e 00000000 4f756368 2c206f75 IRA.....Ouch, ou\n+ 0x003eab18 74206f66 206d656d 6f727920 64657465 t of memory dete\n+ 0x003eab28 63746564 2e0a0000 2f6d6972 61636f6e cted..../miracon\n+ 0x003eab38 76657274 00000000 202d7620 3e2f6465 vert.... -v >/de\n+ 0x003eab48 762f6e75 6c6c2032 3e263100 2f000000 v/null 2>&1./...\n+ 0x003eab58 202d7420 68746d6c 00000000 202d7420 -t html.... -t \n+ 0x003eab68 74787400 202d7420 63616600 202d7420 txt. -t caf. -t \n+ 0x003eab78 6d616600 202d7420 74637300 202d7420 maf. -t tcs. -t \n+ 0x003eab88 61636500 202d7420 67666633 00000000 ace. -t gff3....\n+ 0x003eab98 202d7420 77696700 202d7420 66617374 -t wig. -t fast\n+ 0x003eaba8 61000000 202d7420 65787000 2e2e2f00 a... -t exp.../.\n+ 0x003eabb8 5f645f69 6e666f2f 00000000 202d5020 _d_info/.... -P \n+ 0x003eabc8 222d2d6a 6f623d00 5c220000 22200000 \"--job=.\\\"..\" ..\n+ 0x003eabd8 5f4c6172 6765436f 6e746967 735f6f75 _LargeContigs_ou\n+ 0x003eabe8 74000000 2f657874 72616374 4c617267 t.../extractLarg\n+ 0x003eabf8 65436f6e 74696773 2e736800 23212f62 eContigs.sh.#!/b\n+ 0x003eac08 696e2f73 680a0a65 63686f0a 6563686f in/sh..echo.echo\n+ 0x003eac18 20546869 73206973 20686f77 204d4952 This is how MIR\n+ 0x003eac28 41206578 74726163 74656420 276c6172 A extracted 'lar\n+ 0x003eac38 67652063 6f6e7469 67732720 66726f6d ge contigs' from\n+ 0x003eac48 20746865 20746f74 616c2061 7373656d the total assem\n+ 0x003eac58 626c7920 666f7220 796f753a 0a656368 bly for you:.ech\n+ 0x003eac68 6f202069 74206d61 64652061 206c6973 o it made a lis\n+ 0x003eac78 74206f66 20636f6e 74696773 205c2873 t of contigs \\(s\n+ 0x003eac88 65652069 6e666f20 66696c65 20000000 ee info file ...\n+ 0x003eac98 5c290a65 63686f20 20776869 63682072 \\).echo which r\n+ 0x003eaca8 65616368 65642061 20636572 7461696e eached a certain\n+ 0x003eacb8 206c656e 67746820 5c287573 75616c6c length \\(usuall\n+ 0x003eacc8 79203530 302c2073 6565202d 4d493a6c y 500, see -MI:l\n+ 0x003eacd8 63733d2e 2e2e5c29 20616e64 20686164 cs=...\\) and had\n+ 0x003eace8 20617420 6c656173 7420312f 33206f66 at least 1/3 of\n+ 0x003eacf8 0a656368 6f202074 68652061 76657261 .echo the avera\n+ 0x003ead08 67652063 6f766572 61676520 5c287065 ge coverage \\(pe\n+ 0x003ead18 72207365 7175656e 63696e67 20746563 r sequencing tec\n+ 0x003ead28 686e6f6c 6f67795c 292e0a65 63686f0a hnology\\)..echo.\n+ 0x003ead38 6563686f 204e6f74 65207468 61742079 echo Note that y\n+ 0x003ead48 6f752063 616e2072 65646566 696e6520 ou can redefine \n+ 0x003ead58 77686174 206c6172 67652063 6f6e7469 what large conti\n+ 0x003ead68 67732061 72652066 6f722079 6f752062 gs are for you b\n+ 0x003ead78 79207369 6d706c79 20757369 6e672061 y simply using a\n+ 0x003ead88 6e790a65 63686f20 636f6d62 696e6174 ny.echo combinat\n+ 0x003ead98 696f6e20 6f66202d 6e2c202d 782c202d ion of -n, -x, -\n+ 0x003eada8 7920616e 64202d7a 20706172 616d6574 y and -z paramet\n+ 0x003eadb8 65727320 6f662027 6d697261 636f6e76 ers of 'miraconv\n+ 0x003eadc8 65727427 20696e73 74656164 206f6620 ert' instead of \n+ 0x003eadd8 6f6e6c79 20746865 0a656368 6f20272d only the.echo '-\n+ 0x003eade8 6e272070 6172616d 65746572 20617320 n' parameter as \n+ 0x003eadf8 75736564 20696e20 74686973 20657861 used in this exa\n+ 0x003eae08 6d706c65 2e0a6563 686f0a65 63686f20 mple..echo.echo \n+ 0x003eae18 596f7520 63616e20 666f6c6c 6f772074 You can follow t\n+ 0x003eae28 68652070 726f6772 65737320 6f662074 he progress of t\n+ 0x003eae38 68652063 6f6e7665 7273696f 6e20696e he conversion in\n+ 0x003eae48 20746865 2066696c 65202265 632e6c6f the file \"ec.lo\n+ 0x003eae58 67220a65 63686f0a 0a6d6972 61636f6e g\".echo..miracon\n+ 0x003eae68 76657274 20000000 203e6563 2e6c6f67 vert ... >ec.log\n+ 0x003eae78 20323e26 310a0a69 66205b20 243f202d 2>&1..if [ $? -\n+ 0x003eae88 65712030 205d3b74 68656e0a 20202072 eq 0 ];then. r\n+ 0x003eae98 6d206563 2e6c6f67 0a202020 6563686f m ec.log. echo\n+ 0x003eaea8 2046696e 69736865 642c2061 6c6c2064 Finished, all d\n+ 0x003eaeb8 6f6e652e 0a656c73 650a2020 20746169 one..else. tai\n+ 0x003eaec8 6c202d35 30206563 2e6c6f67 0a202020 l -50 ec.log. \n+ 0x003eaed8 6563686f 0a202020 6563686f 204f6f6f echo. echo Ooo\n+ 0x003eaee8 70732c20 736f6d65 7468696e 67207765 ps, something we\n+ 0x003eaef8 6e742077 726f6e67 2e20506c 65617365 nt wrong. Please\n+ 0x003eaf08 20636f6e 73756c74 20746865 2066696c consult the fil\n+ 0x003eaf18 65202765 632d6c6f 67272069 6e207468 e 'ec-log' in th\n+ 0x003eaf28 69732064 69726563 746f7279 2e0a6669 is directory..fi\n+ 0x003eaf38 00000000 436f756c 64206e6f 74206669 ....Could not fi\n+ 0x003eaf48 6e642065 78656375 7461626c 6520276d nd executable 'm\n+ 0x003eaf58 69726163 6f6e7665 72742720 666f7220 iraconvert' for \n+ 0x003eaf68 65787472 61637469 6e67206c 61726765 extracting large\n+ 0x003eaf78 20636f6e 74696773 3f0a0000 53746172 contigs?...Star\n+ 0x003eaf88 74696e67 20657874 72616374 696f6e20 ting extraction \n+ 0x003eaf98 6f66206c 61726765 20636f6e 74696773 of large contigs\n+ 0x003eafa8 206e6f77 20287468 6973206d 61792074 now (this may t\n+ 0x003eafb8 616b6520 61207768 696c652c 20706c65 ake a while, ple\n+ 0x003eafc8 61736520 62652070 61746965 6e74292e ase be patient).\n+ 0x003eafd8 00000000 203e6563 2e6c6f67 20323e26 .... >ec.log 2>&\n+ 0x003eafe8 31000000 0a457874 72616374 696f6e20 1....Extraction \n+ 0x003eaff8 6661696c 65642c20 706c6561 73652063 failed, please c\n+ 0x003eb008 6f6e7375 6c742000 2f65632e 6c6f670a onsult ./ec.log.\n+ 0x003eb018 666f7220 6d6f7265 20696e66 6f726d61 for more informa\n+ 0x003eb028 74696f6e 206f6e20 7768792e 0a000000 tion on why.....\n+ 0x003eb038 0a446f6e 652e0a00 65632e6c 6f670000 .Done...ec.log..\n+ 0x003eb048 4c617267 6520636f 6e746967 7320636f Large contigs co\n+ 0x003eb058 756c6420 6e6f7420 62652065 78747261 uld not be extra\n+ 0x003eb068 63746564 2c20736f 7272792e 0a0a444f cted, sorry...DO\n+ 0x003eb078 4e275420 50414e49 43212049 6e207468 N'T PANIC! In th\n+ 0x003eb088 65206469 72656374 6f72790a 20202020 e directory. \n+ 0x003eb098 27000000 270a796f 75207769 6c6c2066 '...'.you will f\n+ 0x003eb0a8 696e6420 61207363 72697074 2063616c ind a script cal\n+ 0x003eb0b8 6c656420 20202765 78747261 63744c61 led 'extractLa\n+ 0x003eb0c8 72676543 6f6e7469 67732e73 68270a77 rgeContigs.sh'.w\n+ 0x003eb0d8 68696368 2073686f 77732079 6f752068 hich shows you h\n+ 0x003eb0e8 6f772074 6f206578 74726163 74206c61 ow to extract la\n+ 0x003eb0f8 72676520 636f6e74 69677320 66726f6d rge contigs from\n+ 0x003eb108 20796f75 72206173 73656d62 6c792e20 your assembly. \n+ 0x003eb118 45697468 65727265 61642069 7420746f Eitherread it to\n+ 0x003eb128 20756e64 65727374 616e6420 686f7720 understand how \n+ 0x003eb138 69742773 20646f6e 65206f72 202e2e2e it's done or ...\n+ 0x003eb148 206a7573 74207275 6e206974 203a2d29 just run it :-)\n+ 0x003eb158 0a000000 2e2e2f2e 2e000000 2f5f746d ....../...../_tm\n+ 0x003eb168 70726563 72656174 65000000 2e636166 precreate....caf\n+ 0x003eb178 00000000 436f756c 64206e6f 74206669 ....Could not fi\n+ 0x003eb188 6e642065 78656375 7461626c 6520276d nd executable 'm\n+ 0x003eb198 69726163 6f6e7665 72742720 666f7220 iraconvert' for \n+ 0x003eb1a8 72652d63 72656174 696e6720 43414620 re-creating CAF \n+ 0x003eb1b8 72657375 6c747320 66696c65 3f0a0000 results file?...\n+ 0x003eb1c8 53746172 74696e67 20726563 72656174 Starting recreat\n+ 0x003eb1d8 696e6720 43414620 72657375 6c747320 ing CAF results \n+ 0x003eb1e8 66696c65 2028706c 65617365 20626520 file (please be \n+ 0x003eb1f8 70617469 656e7429 2e000000 203e7263 patient).... >rc\n+ 0x003eb208 2e6c6f67 20323e26 31000000 0a4f6f6f .log 2>&1....Ooo\n+ 0x003eb218 6f70732c 20746861 74206661 696c6564 ops, that failed\n+ 0x003eb228 2c20706c 65617365 20636f6e 73756c74 , please consult\n+ 0x003eb238 20000000 2f72632e 6c6f670a 666f7220 .../rc.log.for \n+ 0x003eb248 6d6f7265 20696e66 6f726d61 74696f6e more information\n+ 0x003eb258 206f6e20 7768792e 0a000000 72632e6c on why.....rc.l\n+ 0x003eb268 6f670000 202d5700 4f6f6f6f 6f70733f og.. -W.Ooooops?\n+ 0x003eb278 20536f6d 65686f77 20666169 6c656420 Somehow failed \n+ 0x003eb288 746f206c 61756e63 683a2000 5573696e to launch: .Usin\n+ 0x003eb298 67207265 73637565 20617373 656d626c g rescue assembl\n+ 0x003eb2a8 79206d6f 64652c20 62757420 65787472 y mode, but extr\n+ 0x003eb2b8 61637469 6f6e206f 66206c61 72676520 action of large \n+ 0x003eb2c8 636f6e74 69677320 77696c6c 206e6f74 contigs will not\n+ 0x003eb2d8 20626520 646f6e65 20617574 6f6d6174 be done automat\n+ 0x003eb2e8 6963616c 6c792e0a 00000000 0a536565 ically.......See\n+ 0x003eb2f8 6e207369 676e616c 3a200000 57726170 n signal: ..Wrap\n+ 0x003eb308 70656420 4d495241 2070726f 63657373 ped MIRA process\n+ 0x003eb318 20776173 20746572 6d696e61 74656420 was terminated \n+ 0x003eb328 62792061 20736967 6e616c2e 20435452 by a signal. CTR\n+ 0x003eb338 4c2d4320 6d617920 68617665 20626565 L-C may have bee\n+ 0x003eb348 6e206120 63617573 652e0000 4d495241 n a cause...MIRA\n+ 0x003eb358 2073746f 70706564 20647565 20746f20 stopped due to \n+ 0x003eb368 616e2065 78746572 6e616c20 7369676e an external sign\n+ 0x003eb378 616c0000 766f6964 206d6972 614d6169 al..void miraMai\n+ 0x003eb388 6e5f6c61 756e6368 57726170 70656428 n_launchWrapped(\n+ 0x003eb398 696e7420 61726763 2c206368 6172202a int argc, char *\n+ 0x003eb3a8 2a206172 67762900 57726170 70656420 * argv).Wrapped \n+ 0x003eb3b8 4d495241 2070726f 63657373 20746572 MIRA process ter\n+ 0x003eb3c8 6d696e61 74656420 77697468 6f757420 minated without \n+ 0x003eb3d8 6e6f726d 616c2065 7869742e 204d6179 normal exit. May\n+ 0x003eb3e8 62652069 74206861 73206265 656e206b be it has been k\n+ 0x003eb3f8 696c6c65 64206279 20746865 204f5320 illed by the OS \n+ 0x003eb408 28626563 61757365 206f6620 72756e74 (because of runt\n+ 0x003eb418 696d6520 6f72206d 656d6f72 79207573 ime or memory us\n+ 0x003eb428 61676529 206f7220 62792061 20757365 age) or by a use\n+ 0x003eb438 72207769 74682073 75666669 6369656e r with sufficien\n+ 0x003eb448 74207072 6976696c 65676573 2e000000 t privileges....\n+ 0x003eb458 4d495241 2070726f 6261626c 7920676f MIRA probably go\n+ 0x003eb468 74206b69 6c6c6564 203a2d28 00000000 t killed :-(....\n+ 0x003eb478 57726170 70656420 4d495241 2070726f Wrapped MIRA pro\n+ 0x003eb488 63657373 20657869 74656420 77697468 cess exited with\n+ 0x003eb498 20616e20 6572726f 722e0a00 0a0a5765 an error.....We\n+ 0x003eb4a8 27726520 646f6e65 20686572 652c2074 're done here, t\n+ 0x003eb4b8 68616e6b 20796f75 20666f72 20757369 hank you for usi\n+ 0x003eb4c8 6e67204d 4952412e 00000000 72657375 ng MIRA.....resu\n+ 0x003eb4d8 6d650000 6d636865 636b0000 6d646368 me..mcheck..mdch\n+ 0x003eb4e8 65636b00 63776400 74687265 61647300 eck.cwd.threads.\n+ 0x003eb4f8 6e6f7772 61700000 6d697261 636f6e76 nowrap..miraconv\n+ 0x003eb508 65727409 284d4952 414c4942 20766572 ert.(MIRALIB ver\n+ 0x003eb518 73696f6e 20000000 290a4175 74686f72 sion ...).Author\n+ 0x003eb528 3a202042 61737469 656e2043 68657672 : Bastien Chevr\n+ 0x003eb538 65757809 28626163 68406368 65767265 eux.(bach@chevre\n+ 0x003eb548 75782e6f 7267290a 50757270 6f73653a ux.org).Purpose:\n+ 0x003eb558 20636f6e 76657274 20617373 656d626c convert assembl\n+ 0x003eb568 7920616e 64207365 7175656e 63696e67 y and sequencing\n+ 0x003eb578 2066696c 65207479 7065732e 0a0a0000 file types.....\n+ 0x003eb588 55736167 653a0a6d 69726163 6f6e7665 Usage:.miraconve\n+ 0x003eb598 7274205b 2d66203c 66726f6d 74797065 rt [-f ] [-t \n+ 0x003eb5b8 5b2d7420 3c746f74 7970653e 202e2e2e [-t ...\n+ 0x003eb5c8 5d5d0a09 5b2d6141 4368696d 4d73755a ]]..[-aAChimMsuZ\n+ 0x003eb5d8 5d0a095b 2d63666c 6e4e6f50 71727476 ]..[-cflnNoPqrtv\n+ 0x003eb5e8 78587959 7a207b2e 2e2e7d5d 0a097b69 xXyYz {...}]..{i\n+ 0x003eb5f8 6e66696c 657d207b 6f757466 696c657d nfile} {outfile}\n+ 0x003eb608 205b3c74 6f747970 653e203c 746f7479 [ ...]....Opti\n+ 0x003eb628 6f6e733a 0a000000 092d6620 3c66726f ons:.....-f .load this\n+ 0x003eb648 20747970 65206f66 2070726f 6a656374 type of project\n+ 0x003eb658 2066696c 65732c20 77686572 65206672 files, where fr\n+ 0x003eb668 6f6d7479 70652069 733a0a09 20202063 omtype is:.. c\n+ 0x003eb678 61660909 20612063 6f6d706c 65746520 af.. a complete \n+ 0x003eb688 61737365 6d626c79 206f7220 73696e67 assembly or sing\n+ 0x003eb698 6c652073 65717565 6e636573 2066726f le sequences fro\n+ 0x003eb6a8 6d204341 460a0920 20206d61 66090920 m CAF.. maf.. \n+ 0x003eb6b8 6120636f 6d706c65 74652061 7373656d a complete assem\n+ 0x003eb6c8 626c7920 6f722073 696e676c 65207365 bly or single se\n+ 0x003eb6d8 7175656e 63657320 66726f6d 20434146 quences from CAF\n+ 0x003eb6e8 0a092020 20666173 74610920 73657175 .. fasta. sequ\n+ 0x003eb6f8 656e6365 73206672 6f6d2061 20464153 ences from a FAS\n+ 0x003eb708 54412066 696c650a 09202020 66617374 TA file.. fast\n+ 0x003eb718 71092073 65717565 6e636573 2066726f q. sequences fro\n+ 0x003eb728 6d206120 46415354 51206669 6c650a09 m a FASTQ file..\n+ 0x003eb738 20202067 625b667c 6b7c6666 5d092073 gb[f|k|ff]. s\n+ 0x003eb748 65717565 6e636573 2066726f 6d206120 equences from a \n+ 0x003eb758 47656e42 616e6b20 66696c65 0a092020 GenBank file.. \n+ 0x003eb768 20706864 09092073 65717565 6e636573 phd.. sequences\n+ 0x003eb778 2066726f 6d206120 50484420 66696c65 from a PHD file\n+ 0x003eb788 0a092020 20666f66 6e657870 09207365 .. fofnexp. se\n+ 0x003eb798 7175656e 63657320 696e2045 58502066 quences in EXP f\n+ 0x003eb7a8 696c6573 2066726f 6d206669 6c65206f iles from file o\n+ 0x003eb7b8 66206669 6c656e61 6d65730a 00000000 f filenames.....\n+ 0x003eb7c8 092d7420 3c746f74 7970653e 09777269 .-t .wri\n+ 0x003eb7d8 74652074 68652073 65717565 6e636573 te the sequences\n+ 0x003eb7e8 2f617373 656d626c 7920746f 20746869 /assembly to thi\n+ 0x003eb7f8 73207479 70652028 6d756c74 69706c65 s type (multiple\n+ 0x003eb808 0a090909 6d656e74 696f6e73 206f6620 ....mentions of \n+ 0x003eb818 2d742061 72652061 6c6c6f77 6564293a -t are allowed):\n+ 0x003eb828 0a092020 20616365 09092073 65717565 .. ace.. seque\n+ 0x003eb838 6e636573 206f7220 636f6d70 6c657465 nces or complete\n+ 0x003eb848 20617373 656d626c 7920746f 20414345 assembly to ACE\n+ 0x003eb858 0a092020 20636166 09092073 65717565 .. caf.. seque\n+ 0x003eb868 6e636573 206f7220 636f6d70 6c657465 nces or complete\n+ 0x003eb878 20617373 656d626c 7920746f 20434146 assembly to CAF\n+ 0x003eb888 0a092020 206d6166 09092073 65717565 .. maf.. seque\n+ 0x003eb898 6e636573 206f7220 636f6d70 6c657465 nces or complete\n+ 0x003eb8a8 20617373 656d626c 7920746f 204d4146 assembly to MAF\n+ 0x003eb8b8 0a092020 2073616d 09092063 6f6d706c .. sam.. compl\n+ 0x003eb8c8 65746520 61737365 6d626c79 20746f20 ete assembly to \n+ 0x003eb8d8 53414d0a 09202020 73616d6e 62620920 SAM.. samnbb. \n+ 0x003eb8e8 6c696b65 2061626f 76652c20 62757420 like above, but \n+ 0x003eb8f8 6c656176 696e6720 6f757420 72656665 leaving out refe\n+ 0x003eb908 72656e63 65202862 61636b62 6f6e6573 rence (backbones\n+ 0x003eb918 2920696e 0a090909 20206d61 7070696e ) in.... mappin\n+ 0x003eb928 67206173 73656d62 6c696573 0a092020 g assemblies.. \n+ 0x003eb938 2067625b 667c6b7c 66665d09 20736571 gb[f|k|ff]. seq\n+ 0x003eb948 75656e63 6573206f 7220636f 6e73656e uences or consen\n+ 0x003eb958 73757320 746f2047 656e4261 6e6b0a09 sus to GenBank..\n+ 0x003eb968 20202067 66663309 0920636f 6e73656e gff3.. consen\n+ 0x003eb978 73757320 746f2047 4646330a 09202020 sus to GFF3.. \n+ 0x003eb988 77696709 09206173 73656d62 6c792063 wig.. assembly c\n+ 0x003eb998 6f766572 61676520 696e666f 20746f20 overage info to \n+ 0x003eb9a8 77696767 6c652066 696c650a 09202020 wiggle file.. \n+ 0x003eb9b8 67637769 67092061 7373656d 626c7920 gcwig. assembly \n+ 0x003eb9c8 67632063 6f6e7465 6e742069 6e666f20 gc content info \n+ 0x003eb9d8 746f2077 6967676c 65206669 6c650a09 to wiggle file..\n+ 0x003eb9e8 20202066 61737461 09207365 7175656e fasta. sequen\n+ 0x003eb9f8 63657320 6f722063 6f6e7365 6e737573 ces or consensus\n+ 0x003eba08 20746f20 46415354 41206669 6c652028 to FASTA file (\n+ 0x003eba18 7175616c 69746965 7320746f 0a090909 qualities to....\n+ 0x003eba28 20202e71 75616c29 0a092020 20666173 .qual).. fas\n+ 0x003eba38 74710920 73657175 656e6365 73206f72 tq. sequences or\n+ 0x003eba48 20636f6e 73656e73 75732074 6f204641 consensus to FA\n+ 0x003eba58 53545120 66696c65 0a092020 20657870 STQ file.. exp\n+ 0x003eba68 09092073 65717565 6e636573 206f7220 .. sequences or \n+ 0x003eba78 636f6d70 6c657465 20617373 656d626c complete assembl\n+ 0x003eba88 7920746f 20455850 2066696c 65732069 y to EXP files i\n+ 0x003eba98 6e0a0909 09202064 69726563 746f7269 n.... directori\n+ 0x003ebaa8 65732e20 436f6d70 6c657465 20617373 es. Complete ass\n+ 0x003ebab8 656d626c 69657320 61726520 73756974 emblies are suit\n+ 0x003ebac8 65642066 6f722067 6170340a 09090920 ed for gap4.... \n+ 0x003ebad8 20696d70 6f727420 61732064 69726563 import as direc\n+ 0x003ebae8 74656420 61737365 6d626c79 2e0a0909 ted assembly....\n+ 0x003ebaf8 0920204e 6f74653a 20757369 6e672063 . Note: using c\n+ 0x003ebb08 61663267 61702074 6f20696d 706f7274 af2gap to import\n+ 0x003ebb18 20696e74 6f206761 70342069 73207265 into gap4 is re\n+ 0x003ebb28 636f6d6d 656e6465 640a0909 09202074 commended.... t\n+ 0x003ebb38 686f7567 680a0920 20207465 78740909 hough.. text..\n+ 0x003ebb48 20636f6d 706c6574 65206173 73656d62 complete assemb\n+ 0x003ebb58 6c792074 6f207465 78742061 6c69676e ly to text align\n+ 0x003ebb68 6d656e74 20286f6e 6c792077 68656e20 ment (only when \n+ 0x003ebb78 2d662069 730a0909 09202063 61662c20 -f is.... caf, \n+ 0x003ebb88 6d616620 6f722067 6266290a 09202020 maf or gbf).. \n+ 0x003ebb98 68746d6c 09092063 6f6d706c 65746520 html.. complete \n+ 0x003ebba8 61737365 6d626c79 20746f20 48544d4c assembly to HTML\n+ 0x003ebbb8 20286f6e 6c792077 68656e20 2d662069 (only when -f i\n+ 0x003ebbc8 73206361 662c206d 6166206f 720a0909 s caf, maf or...\n+ 0x003ebbd8 09202067 6266290a 09202020 74637309 . gbf).. tcs.\n+ 0x003ebbe8 0920636f 6d706c65 74652061 7373656d . complete assem\n+ 0x003ebbf8 626c7920 746f2074 63730a09 20202068 bly to tcs.. h\n+ 0x003ebc08 736e7009 09207375 72726f75 6e64696e snp.. surroundin\n+ 0x003ebc18 67206f66 20534e50 20746167 73202853 g of SNP tags (S\n+ 0x003ebc28 524f632c 2053414f 632c2053 494f6329 ROc, SAOc, SIOc)\n+ 0x003ebc38 20746f20 48544d4c 0a090909 20286f6e to HTML.... (on\n+ 0x003ebc48 6c792077 68656e20 2d662069 73206361 ly when -f is ca\n+ 0x003ebc58 662c206d 6166206f 72206762 66290a09 f, maf or gbf)..\n+ 0x003ebc68 20202061 736e7009 0920616e 616c7973 asnp.. analys\n+ 0x003ebc78 6973206f 6620534e 50207461 67730a09 is of SNP tags..\n+ 0x003ebc88 09092028 6f6e6c79 20776865 6e202d66 .. (only when -f\n+ 0x003ebc98 20697320 6361662c 206d6166 206f7220 is caf, maf or \n+ 0x003ebca8 67626629 0a092020 20637374 61747309 gbf).. cstats.\n+ 0x003ebcb8 20636f6e 74696720 73746174 69737469 contig statisti\n+ 0x003ebcc8 63732066 696c6520 6c696b65 2066726f cs file like fro\n+ 0x003ebcd8 6d204d49 52410a09 09092028 6f6e6c79 m MIRA.... (only\n+ 0x003ebce8 20776865 6e20736f 75726365 20636f6e when source con\n+ 0x003ebcf8 7461696e 7320636f 6e746967 73290a09 tains contigs)..\n+ 0x003ebd08 20202063 726c6973 74092063 6f6e7469 crlist. conti\n+ 0x003ebd18 67207265 6164206c 69737420 66696c65 g read list file\n+ 0x003ebd28 206c696b 65206672 6f6d204d 4952410a like from MIRA.\n+ 0x003ebd38 09090920 286f6e6c 79207768 656e2073 ... (only when s\n+ 0x003ebd48 6f757263 6520636f 6e746169 6e732063 ource contains c\n+ 0x003ebd58 6f6e7469 6773290a 09202020 6d61736b ontigs).. mask\n+ 0x003ebd68 65646661 73746109 20726561 64732077 edfasta. reads w\n+ 0x003ebd78 68657265 20736571 75656e63 696e6720 here sequencing \n+ 0x003ebd88 76656374 6f722069 73206d61 736b6564 vector is masked\n+ 0x003ebd98 206f7574 0a090909 20287769 74682058 out.... (with X\n+ 0x003ebda8 2920746f 20464153 54412066 696c6520 ) to FASTA file \n+ 0x003ebdb8 28717561 6c697469 65732074 6f202e71 (qualities to .q\n+ 0x003ebdc8 75616c29 0a092020 20736361 66090920 ual).. scaf.. \n+ 0x003ebdd8 73657175 656e6365 73206f72 20636f6d sequences or com\n+ 0x003ebde8 706c6574 65206173 73656d62 6c792074 plete assembly t\n+ 0x003ebdf8 6f207369 6e676c65 20736571 75656e63 o single sequenc\n+ 0x003ebe08 65732043 41460a00 092d6109 09417070 es CAF...-a..App\n+ 0x003ebe18 656e6420 746f2074 61726765 74206669 end to target fi\n+ 0x003ebe28 6c657320 696e7374 65616420 6f662072 les instead of r\n+ 0x003ebe38 65777269 74696e67 0a000000 092d4109 ewriting.....-A.\n+ 0x003ebe48 09446f20 6e6f7420 41646a75 73742073 .Do not Adjust s\n+ 0x003ebe58 65717565 6e636520 63617365 0a090909 equence case....\n+ 0x003ebe68 20576865 6e207265 6164696e 6720666f When reading fo\n+ 0x003ebe78 726d6174 73207768 69636820 64656669 rmats which defi\n+ 0x003ebe88 6e652063 6c697070 696e6720 706f696e ne clipping poin\n+ 0x003ebe98 74732c0a 09090920 20616e64 20736176 ts,.... and sav\n+ 0x003ebea8 696e6720 746f2066 6f726d61 74732077 ing to formats w\n+ 0x003ebeb8 68696368 20646f20 6e6f7420 68617665 hich do not have\n+ 0x003ebec8 20636c69 7070696e 670a0909 09202069 clipping.... i\n+ 0x003ebed8 6e666f72 6d617469 6f6e2c20 6d697261 nformation, mira\n+ 0x003ebee8 636f6e76 65727420 6e6f726d 616c6c79 convert normally\n+ 0x003ebef8 2061646a 75737473 20746865 20636173 adjusts the cas\n+ 0x003ebf08 65206f66 0a090909 20207265 61642073 e of.... read s\n+ 0x003ebf18 65717565 6e636573 3a206c6f 77657220 equences: lower \n+ 0x003ebf28 63617365 20666f72 20636c69 70706564 case for clipped\n+ 0x003ebf38 20706172 74732c20 75707065 720a0909 parts, upper...\n+ 0x003ebf48 09202063 61736520 666f7220 756e636c . case for uncl\n+ 0x003ebf58 69707065 64207061 72747320 6f662072 ipped parts of r\n+ 0x003ebf68 65616473 2e0a0909 09202055 7365202d eads..... Use -\n+ 0x003ebf78 41206966 20796f75 20646f20 6e6f7420 A if you do not \n+ 0x003ebf88 77616e74 20746869 732e2053 65652061 want this. See a\n+ 0x003ebf98 6c736f20 2d432e0a 09090920 4170706c lso -C..... Appl\n+ 0x003ebfa8 69657320 6f6e6c79 20746f20 66696c65 ies only to file\n+ 0x003ebfb8 732f666f 726d6174 73207768 69636820 s/formats which \n+ 0x003ebfc8 646f206e 6f742063 6f6e7461 696e0a09 do not contain..\n+ 0x003ebfd8 09092020 636f6e74 6967732e 0a000000 .. contigs.....\n+ 0x003ebfe8 092d6209 09426c69 6e642064 6174610a .-b..Blind data.\n+ 0x003ebff8 09090920 5265706c 61636573 20616c6c ... Replaces all\n+ 0x003ec008 20626173 65732069 6e207265 6164732f bases in reads/\n+ 0x003ec018 636f6e74 69677320 77697468 20612027 contigs with a '\n+ 0x003ec028 63270a00 092d4309 09506572 666f726d c'...-C..Perform\n+ 0x003ec038 20686172 6420636c 69702074 6f207265 hard clip to re\n+ 0x003ec048 6164730a 09090920 5768656e 20726561 ads.... When rea\n+ 0x003ec058 64696e67 20666f72 6d617473 20776869 ding formats whi\n+ 0x003ec068 63682064 6566696e 6520636c 69707069 ch define clippi\n+ 0x003ec078 6e672070 6f696e74 732c2077 696c6c0a ng points, will.\n+ 0x003ec088 09090920 20736176 65206f6e 6c792074 ... save only t\n+ 0x003ec098 68652075 6e636c69 70706564 20706172 he unclipped par\n+ 0x003ec0a8 7420696e 746f2074 68652072 6573756c t into the resul\n+ 0x003ec0b8 74206669 6c652e0a 09090920 4170706c t file..... Appl\n+ 0x003ec0c8 69657320 6f6e6c79 20746f20 66696c65 ies only to file\n+ 0x003ec0d8 732f666f 726d6174 73207768 69636820 s/formats which \n+ 0x003ec0e8 646f206e 6f742063 6f6e7461 696e0a09 do not contain..\n+ 0x003ec0f8 09092020 636f6e74 6967732e 0a000000 .. contigs.....\n+ 0x003ec108 092d6409 0944656c 65746520 67617020 .-d..Delete gap \n+ 0x003ec118 6f6e6c79 20636f6c 756d6e73 0a090909 only columns....\n+ 0x003ec128 20576865 6e206f75 74707574 20697320 When output is \n+ 0x003ec138 636f6e74 6967733a 2064656c 65746520 contigs: delete \n+ 0x003ec148 636f6c75 6d6e7320 74686174 20617265 columns that are\n+ 0x003ec158 0a090909 2020656e 74697265 6c792067 .... entirely g\n+ 0x003ec168 61707320 286c696b 65206166 74657220 aps (like after \n+ 0x003ec178 68617669 6e672064 656c6574 65642072 having deleted r\n+ 0x003ec188 65616473 20647572 696e670a 09090920 eads during.... \n+ 0x003ec198 20656469 74696e67 20696e20 67617034 editing in gap4\n+ 0x003ec1a8 206f7220 73696d69 6c617229 0a090909 or similar)....\n+ 0x003ec1b8 20576865 6e206f75 74707574 20697320 When output is \n+ 0x003ec1c8 72656164 733a2064 656c6574 65206761 reads: delete ga\n+ 0x003ec1d8 70732069 6e207265 6164730a 00000000 ps in reads.....\n+ 0x003ec1e8 092d4609 0946696c 74657220 72656164 .-F..Filter read\n+ 0x003ec1f8 2067726f 75707320 746f2064 69666665 groups to diffe\n+ 0x003ec208 72656e74 2066696c 65730a09 09092057 rent files.... W\n+ 0x003ec218 6f726b73 206f6e6c 7920666f 7220696e orks only for in\n+ 0x003ec228 70757420 66696c65 73207769 74682072 put files with r\n+ 0x003ec238 65616467 726f7570 73202843 41462f4d eadgroups (CAF/M\n+ 0x003ec248 4146290a 09090920 3320286f 72203429 AF).... 3 (or 4)\n+ 0x003ec258 2066696c 65732067 656e6572 61746564 files generated\n+ 0x003ec268 3a206f6e 65206f72 2074776f 20666f72 : one or two for\n+ 0x003ec278 20706169 7265642c 206f6e65 0a090909 paired, one....\n+ 0x003ec288 2020666f 7220756e 70616972 65642061 for unpaired a\n+ 0x003ec298 6e64206f 6e652066 6f722064 65627269 nd one for debri\n+ 0x003ec2a8 73207265 6164732e 0a090909 20526561 s reads..... Rea\n+ 0x003ec2b8 64732069 6e207061 69726564 2066696c ds in paired fil\n+ 0x003ec2c8 65206172 6520696e 7465726c 61636564 e are interlaced\n+ 0x003ec2d8 20627920 64656661 756c742c 20757365 by default, use\n+ 0x003ec2e8 202d460a 09090920 20747769 63652074 -F.... twice t\n+ 0x003ec2f8 6f206372 65617465 20736570 61726174 o create separat\n+ 0x003ec308 65206669 6c65732e 0a000000 092d6d09 e files......-m.\n+ 0x003ec318 094d616b 6520636f 6e746967 7320286f .Make contigs (o\n+ 0x003ec328 6e6c7920 666f7220 2d74203d 20636166 nly for -t = caf\n+ 0x003ec338 206f7220 6d616629 0a090909 20456e63 or maf).... Enc\n+ 0x003ec348 61736520 73696e67 6c652072 65616473 ase single reads\n+ 0x003ec358 20617320 636f6e74 69672073 696e676c as contig singl\n+ 0x003ec368 65747320 696e746f 20746865 20434146 ets into the CAF\n+ 0x003ec378 2f4d4146 0a090909 2066696c 652e0a00 /MAF.... file...\n+ 0x003ec388 092d6e20 3c66696c 656e616d 653e0977 .-n .w\n+ 0x003ec398 68656e20 67697665 6e2c2073 656c6563 hen given, selec\n+ 0x003ec3a8 7473206f 6e6c7920 72656164 73206f72 ts only reads or\n+ 0x003ec3b8 20636f6e 74696773 20676976 656e2062 contigs given b\n+ 0x003ec3c8 790a0909 09206e61 6d652069 6e207468 y.... name in th\n+ 0x003ec3d8 61742066 696c652e 0a000000 092d4e20 at file......-N \n+ 0x003ec3e8 3c66696c 656e616d 653e096c 696b6520 .like \n+ 0x003ec3f8 2d6e2c20 62757420 736f7274 73206f75 -n, but sorts ou\n+ 0x003ec408 74707574 20616363 6f726469 6e672074 tput according t\n+ 0x003ec418 6f206f72 64657220 67697665 6e0a0909 o order given...\n+ 0x003ec428 0920696e 2066696c 652e0a00 092d6909 . in file....-i.\n+ 0x003ec438 09776865 6e202d6e 20697320 75736564 .when -n is used\n+ 0x003ec448 2c20696e 76657274 73207468 65207365 , inverts the se\n+ 0x003ec458 6c656374 696f6e0a 00000000 092d6f20 lection......-o \n+ 0x003ec468 3c717561 6c697479 3e740946 41535451 t.FASTQ\n+ 0x003ec478 20717561 6c697479 204f6666 73657420 quality Offset \n+ 0x003ec488 286f6e6c 7920666f 72202d66 203d2027 (only for -f = '\n+ 0x003ec498 66617374 7127290a 09090920 4f666673 fastq').... Offs\n+ 0x003ec4a8 6574206f 66207175 616c6974 79207661 et of quality va\n+ 0x003ec4b8 6c756573 20696e20 46415354 51206669 lues in FASTQ fi\n+ 0x003ec4c8 6c652e20 44656661 756c7420 6f662033 le. Default of 3\n+ 0x003ec4d8 330a0909 09206c6f 61647320 53616e67 3.... loads Sang\n+ 0x003ec4e8 65722f50 68726564 20737479 6c652066 er/Phred style f\n+ 0x003ec4f8 696c6573 2c207573 696e6720 30207472 iles, using 0 tr\n+ 0x003ec508 69657320 746f0a09 09092061 75746f6d ies to.... autom\n+ 0x003ec518 61746963 616c6c79 20726563 6f676e69 atically recogni\n+ 0x003ec528 73652e0a 00000000 092d5020 3c737472 se.......-P .String with\n+ 0x003ec548 204d4952 41207061 72616d65 74657273 MIRA parameters\n+ 0x003ec558 20746f20 62652070 61727365 640a0909 to be parsed...\n+ 0x003ec568 09205573 6566756c 20776865 6e207365 . Useful when se\n+ 0x003ec578 7474696e 67207061 72616d65 74657273 tting parameters\n+ 0x003ec588 20616666 65637469 6e672063 6f6e7365 affecting conse\n+ 0x003ec598 6e737573 0a090909 2063616c 6c696e67 nsus.... calling\n+ 0x003ec5a8 206c696b 65202d43 4f3a6d72 70672065 like -CO:mrpg e\n+ 0x003ec5b8 74632e0a 09090920 452e672e 3a202d50 tc..... E.g.: -P\n+ 0x003ec5c8 20223435 345f5345 5454494e 4753202d \"454_SETTINGS -\n+ 0x003ec5d8 434f3a6d 7270673d 33220a00 092d7120 CO:mrpg=3\"...-q \n+ 0x003ec5e8 3c717561 6c697479 3e095365 74206465 .Set de\n+ 0x003ec5f8 6661756c 74207175 616c6974 7920666f fault quality fo\n+ 0x003ec608 72206261 73657320 696e2066 696c6520 r bases in file \n+ 0x003ec618 74797065 73207769 74686f75 740a0909 types without...\n+ 0x003ec628 09207175 616c6974 79207661 6c756573 . quality values\n+ 0x003ec638 2e204675 72746865 726d6f72 652c2064 . Furthermore, d\n+ 0x003ec648 6f206e6f 74207374 6f702069 66206578 o not stop if ex\n+ 0x003ec658 70656374 65640a09 09092071 75616c69 pected.... quali\n+ 0x003ec668 74792066 696c6573 20617265 206d6973 ty files are mis\n+ 0x003ec678 73696e67 2028652e 672e2027 2e666173 sing (e.g. '.fas\n+ 0x003ec688 74612729 0a000000 092d5220 3c6e616d ta').....-R .Rename contig\n+ 0x003ec6a8 732f7369 6e676c65 74732f72 65616473 s/singlets/reads\n+ 0x003ec6b8 20776974 68206769 76656e20 6e616d65 with given name\n+ 0x003ec6c8 20737472 696e670a 09090920 746f2077 string.... to w\n+ 0x003ec6d8 68696368 20612063 6f756e74 65722069 hich a counter i\n+ 0x003ec6e8 73206170 70656e64 65642e0a 09090920 s appended..... \n+ 0x003ec6f8 4b6e6f77 6e206275 673a2077 696c6c20 Known bug: will \n+ 0x003ec708 63726561 74652064 75706c69 63617465 create duplicate\n+ 0x003ec718 206e616d 65732069 6620696e 7075740a names if input.\n+ 0x003ec728 09090920 20636f6e 7461696e 7320636f ... contains co\n+ 0x003ec738 6e746967 732f7369 6e676c65 74732061 ntigs/singlets a\n+ 0x003ec748 73207765 6c6c2061 73206672 65652072 s well as free r\n+ 0x003ec758 65616473 2c20692e 652e0a09 09092020 eads, i.e..... \n+ 0x003ec768 72656164 73206e6f 7420696e 20636f6e reads not in con\n+ 0x003ec778 74696773 206e6f72 2073696e 676c6574 tigs nor singlet\n+ 0x003ec788 732e0a00 092d5320 3c6e616d 653e0928 s....-S .(\n+ 0x003ec798 6e616d65 29536368 656d6520 666f7220 name)Scheme for \n+ 0x003ec7a8 72656e61 6d696e67 20726561 64732c20 renaming reads, \n+ 0x003ec7b8 696d706f 7274616e 7420666f 720a0909 important for...\n+ 0x003ec7c8 09202070 61697265 642d656e 64732e20 . paired-ends. \n+ 0x003ec7d8 4f6e6c79 2027736f 6c657861 27206973 Only 'solexa' is\n+ 0x003ec7e8 20637572 72656e74 6c792073 7570706f currently suppo\n+ 0x003ec7f8 72746564 2e0a0000 092d5409 09576865 rted.....-T..Whe\n+ 0x003ec808 6e20636f 6e766572 74696e67 2073696e n converting sin\n+ 0x003ec818 676c6520 72656164 732c2074 72696d2f gle reads, trim/\n+ 0x003ec828 636c6970 20617761 79207374 72657463 clip away stretc\n+ 0x003ec838 6865730a 09090920 6f66204e 20616e64 hes.... of N and\n+ 0x003ec848 20582061 6e642065 6e647320 6f662072 X and ends of r\n+ 0x003ec858 65616473 2e204e6f 74653a20 72656d65 eads. Note: reme\n+ 0x003ec868 6d626572 20746f20 75736520 2d432074 mber to use -C t\n+ 0x003ec878 6f0a0909 0920616c 736f2070 6572666f o.... also perfo\n+ 0x003ec888 726d2061 20686172 6420636c 69702028 rm a hard clip (\n+ 0x003ec898 652e672e 20776974 68204641 53544120 e.g. with FASTA \n+ 0x003ec8a8 6173206f 75747075 74292e0a 00000000 as output)......\n+ 0x003ec8b8 092d7609 09507269 6e742076 65727369 .-v..Print versi\n+ 0x003ec8c8 6f6e206e 756d6265 7220616e 64206578 on number and ex\n+ 0x003ec8d8 69740a00 092d5920 3c696e74 65676572 it...-Y .Yield. Max (cl\n+ 0x003ec8f8 69707065 642f7061 64646564 29206261 ipped/padded) ba\n+ 0x003ec908 73657320 746f2063 6f6e7665 72742e0a ses to convert..\n+ 0x003ec918 09090920 5768656e 20757365 64206f6e ... When used on\n+ 0x003ec928 20726561 64733a20 6f757470 75742077 reads: output w\n+ 0x003ec938 696c6c20 636f6e74 61696e20 66697273 ill contain firs\n+ 0x003ec948 74207265 61647320 6f660a09 09092020 t reads of.... \n+ 0x003ec958 66696c65 20776865 7265206c 656e6774 file where lengt\n+ 0x003ec968 68206f66 20636c69 70706564 20626173 h of clipped bas\n+ 0x003ec978 65732074 6f74616c 73206174 206c6561 es totals at lea\n+ 0x003ec988 7374202d 592e0a09 09092057 68656e20 st -Y..... When \n+ 0x003ec998 75736564 206f6e20 636f6e74 6967733a used on contigs:\n+ 0x003ec9a8 206f7574 70757420 77696c6c 20636f6e output will con\n+ 0x003ec9b8 7461696e 20666972 73742063 6f6e7469 tain first conti\n+ 0x003ec9c8 67730a09 09092020 6f662066 696c6520 gs.... of file \n+ 0x003ec9d8 77686572 65206c65 6e677468 206f6620 where length of \n+ 0x003ec9e8 70616464 65642063 6f6e7469 67732074 padded contigs t\n+ 0x003ec9f8 6f74616c 73206174 206c6561 73740a09 otals at least..\n+ 0x003eca08 09092020 2d592e0a 00000000 0a092d2d .. -Y........--\n 0x003eca18 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n 0x003eca28 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n- 0x003eca38 2d2d2d2d 2d2d2d2d 2d2d0a09 54686520 ----------..The \n- 0x003eca48 666f6c6c 6f77696e 67207377 69746368 following switch\n- 0x003eca58 65732077 6f726b20 6f6e6c79 20776865 es work only whe\n- 0x003eca68 6e20696e 70757420 28434146 206f7220 n input (CAF or \n- 0x003eca78 4d414629 0a09636f 6e746169 6e732063 MAF)..contains c\n- 0x003eca88 6f6e7469 67732e20 42657761 72653a20 ontigs. Beware: \n- 0x003eca98 43414620 616e6420 4d416620 63616e20 CAF and MAf can \n- 0x003ecaa8 616c736f 20636f6e 7461696e 0a096a75 also contain..ju\n- 0x003ecab8 73742072 65616473 2e0a092d 2d2d2d2d st reads...-----\n- 0x003ecac8 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n+ 0x003eca38 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n+ 0x003eca48 2d2d2d2d 2d2d0a09 54686520 666f6c6c ------..The foll\n+ 0x003eca58 6f77696e 67207377 69746368 65732077 owing switches w\n+ 0x003eca68 6f726b20 6f6e6c79 20776865 6e20696e ork only when in\n+ 0x003eca78 70757420 28434146 206f7220 4d414629 put (CAF or MAF)\n+ 0x003eca88 0a09636f 6e746169 6e732063 6f6e7469 ..contains conti\n+ 0x003eca98 67732e20 42657761 72653a20 43414620 gs. Beware: CAF \n+ 0x003ecaa8 616e6420 4d416620 63616e20 616c736f and MAf can also\n+ 0x003ecab8 20636f6e 7461696e 0a096a75 73742072 contain..just r\n+ 0x003ecac8 65616473 2e0a092d 2d2d2d2d 2d2d2d2d eads...---------\n 0x003ecad8 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n 0x003ecae8 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n- 0x003ecaf8 2d2d2d0a 0a000000 092d4d09 09446f20 ---......-M..Do \n- 0x003ecb08 6e6f7420 65787472 61637420 636f6e74 not extract cont\n- 0x003ecb18 69677320 286f7220 74686569 7220636f igs (or their co\n- 0x003ecb28 6e73656e 73757329 2c206275 74207468 nsensus), but th\n- 0x003ecb38 650a0909 09202073 65717565 6e636520 e.... sequence \n- 0x003ecb48 6f662074 68652072 65616473 20746865 of the reads the\n- 0x003ecb58 79206172 6520636f 6d706f73 6564206f y are composed o\n- 0x003ecb68 662e0a00 092d7220 5b634371 665d0952 f....-r [cCqf].R\n- 0x003ecb78 6563616c 63756c61 74652063 6f6e7365 ecalculate conse\n- 0x003ecb88 6e737573 20616e64 202f206f 7220636f nsus and / or co\n- 0x003ecb98 6e73656e 73757320 7175616c 69747920 nsensus quality \n- 0x003ecba8 76616c75 65730a09 09092061 6e64202f values.... and /\n- 0x003ecbb8 206f7220 534e5020 66656174 75726520 or SNP feature \n- 0x003ecbc8 74616773 2e0a0909 09202763 27207265 tags..... 'c' re\n- 0x003ecbd8 63616c63 20636f6e 73202620 636f6e73 calc cons & cons\n- 0x003ecbe8 20717561 6c697469 65732028 77697468 qualities (with\n- 0x003ecbf8 20495550 4143290a 09090920 27432720 IUPAC).... 'C' \n- 0x003ecc08 72656361 6c632063 6f6e7320 2620636f recalc cons & co\n- 0x003ecc18 6e732071 75616c69 74696573 2028666f ns qualities (fo\n- 0x003ecc28 7263696e 67206e6f 6e2d4955 50414329 rcing non-IUPAC)\n- 0x003ecc38 0a090909 20277127 20726563 616c6320 .... 'q' recalc \n- 0x003ecc48 636f6e73 656e7375 73207175 616c6974 consensus qualit\n- 0x003ecc58 69657320 6f6e6c79 0a090909 20276627 ies only.... 'f'\n- 0x003ecc68 20726563 616c6320 534e5020 66656174 recalc SNP feat\n- 0x003ecc78 75726573 0a090909 204e6f74 653a206f ures.... Note: o\n- 0x003ecc88 6e6c7920 74686520 6c617374 206f6620 nly the last of \n- 0x003ecc98 63437120 69732072 656c6576 616e742c cCq is relevant,\n- 0x003ecca8 20662077 6f726b73 20617320 610a0909 f works as a...\n- 0x003eccb8 09202073 77697463 6820616e 64206361 . switch and ca\n- 0x003eccc8 6e206265 20636f6d 62696e65 64207769 n be combined wi\n- 0x003eccd8 74682063 51712028 652e672e 20222d72 th cQq (e.g. \"-r\n- 0x003ecce8 2043202d 72206622 290a0909 09204e6f C -r f\").... No\n- 0x003eccf8 74653a20 69662074 68652043 41462f4d te: if the CAF/M\n- 0x003ecd08 41462063 6f6e7461 696e7320 6d756c74 AF contains mult\n- 0x003ecd18 69706c65 20737472 61696e73 2c0a0909 iple strains,...\n- 0x003ecd28 09207265 63616c63 756c6174 696f6e20 . recalculation \n- 0x003ecd38 6f662063 6f6e7320 2620636f 6e732071 of cons & cons q\n- 0x003ecd48 75616c69 74696573 20697320 666f7263 ualities is forc\n- 0x003ecd58 65642c20 796f750a 09090920 2063616e ed, you.... can\n- 0x003ecd68 206a7573 7420696e 666c7565 6e636520 just influence \n- 0x003ecd78 77686574 68657220 49555041 43732061 whether IUPACs a\n- 0x003ecd88 72652075 73656420 6f72206e 6f742e0a re used or not..\n- 0x003ecd98 00000000 092d7309 0973706c 6974206f .....-s..split o\n- 0x003ecda8 75747075 7420696e 746f206d 756c7469 utput into multi\n- 0x003ecdb8 706c6520 66696c65 7320696e 73746561 ple files instea\n- 0x003ecdc8 64206f66 20637265 6174696e 6720610a d of creating a.\n- 0x003ecdd8 09090920 73696e67 6c652066 696c650a ... single file.\n- 0x003ecde8 00000000 092d7509 09276669 6c6c5570 .....-u..'fillUp\n- 0x003ecdf8 20737472 61696e20 67656e6f 6d657327 strain genomes'\n- 0x003ece08 0a090909 2046696c 6c20686f 6c657320 .... Fill holes \n- 0x003ece18 696e2074 68652067 656e6f6d 65206f66 in the genome of\n- 0x003ece28 206f6e65 20737472 61696e20 284e206f one strain (N o\n- 0x003ece38 72204029 0a090909 20776974 68207365 r @).... with se\n- 0x003ece48 7175656e 63652066 726f6d20 6120636f quence from a co\n- 0x003ece58 6e73656e 73757320 6f66206f 74686572 nsensus of other\n- 0x003ece68 20737472 61696e73 0a090909 2054616b strains.... Tak\n- 0x003ece78 65732065 66666563 74206f6e 6c792077 es effect only w\n- 0x003ece88 69746820 2d722061 6e64202d 74206762 ith -r and -t gb\n- 0x003ece98 66206f72 20666173 74612f71 0a090909 f or fasta/q....\n- 0x003ecea8 20696e20 46415354 412f513a 20626173 in FASTA/Q: bas\n- 0x003eceb8 65732066 696c6c65 64207570 20617265 es filled up are\n- 0x003ecec8 20696e20 6c6f7765 72206361 73650a09 in lower case..\n- 0x003eced8 09092069 6e204742 463a2062 61736573 .. in GBF: bases\n- 0x003ecee8 2066696c 6c656420 75702061 72652069 filled up are i\n- 0x003ecef8 6e207570 70657220 63617365 0a000000 n upper case....\n- 0x003ecf08 092d5120 3c696e74 65676572 3e094465 .-Q .De\n- 0x003ecf18 66696e65 73206d69 6e696d75 6d207175 fines minimum qu\n- 0x003ecf28 616c6974 79206120 636f6e73 656e7375 ality a consensu\n- 0x003ecf38 73206261 7365206f 66206120 73747261 s base of a stra\n- 0x003ecf48 696e0a09 0909206d 75737420 68617665 in.... must have\n- 0x003ecf58 2c20636f 6e73656e 73757320 62617365 , consensus base\n- 0x003ecf68 73206265 6c6f7720 74686973 2077696c s below this wil\n- 0x003ecf78 6c206265 20274e27 0a090909 20446566 l be 'N'.... Def\n- 0x003ecf88 61756c74 3a20300a 09090920 4f6e6c79 ault: 0.... Only\n- 0x003ecf98 20757365 64207769 7468202d 722c2061 used with -r, a\n- 0x003ecfa8 6e64202d 66206973 20636166 2f6d6166 nd -f is caf/maf\n- 0x003ecfb8 20616e64 202d7420 69732028 66617374 and -t is (fast\n- 0x003ecfc8 610a0909 0920206f 72206762 66290a00 a.... or gbf)..\n- 0x003ecfd8 092d5620 3c696e74 65676572 3e094465 .-V .De\n- 0x003ecfe8 66696e65 73206d69 6e696d75 6d20636f fines minimum co\n- 0x003ecff8 76657261 67652061 20636f6e 73656e73 verage a consens\n- 0x003ed008 75732062 61736520 6f662061 20737472 us base of a str\n- 0x003ed018 61696e0a 09090920 6d757374 20686176 ain.... must hav\n- 0x003ed028 652c2062 61736573 20776974 6820636f e, bases with co\n- 0x003ed038 76657261 67652062 656c6f77 20746869 verage below thi\n- 0x003ed048 73207769 6c6c2062 6520274e 270a0909 s will be 'N'...\n- 0x003ed058 09204465 6661756c 743a2030 0a090909 . Default: 0....\n- 0x003ed068 204f6e6c 79207573 65642077 69746820 Only used with \n- 0x003ed078 2d722c20 616e6420 2d742069 73202866 -r, and -t is (f\n- 0x003ed088 61737461 0a090909 20206f72 20676266 asta.... or gbf\n- 0x003ed098 290a0000 092d7820 3c696e74 65676572 )....-x .Minimum contig\n- 0x003ed0b8 206f7220 756e636c 69707065 64207265 or unclipped re\n- 0x003ed0c8 6164206c 656e6774 680a0909 09205768 ad length.... Wh\n- 0x003ed0d8 656e206c 6f616469 6e672c20 64697363 en loading, disc\n- 0x003ed0e8 61726420 616c6c20 636f6e74 69677320 ard all contigs \n- 0x003ed0f8 2f207265 61647320 77697468 20610a09 / reads with a..\n- 0x003ed108 0909206c 656e6774 68206c65 73732074 .. length less t\n- 0x003ed118 68616e20 74686973 2076616c 75652e20 han this value. \n- 0x003ed128 44656661 756c743a 20302028 3d737769 Default: 0 (=swi\n- 0x003ed138 74636865 64206f66 66290a09 0909204e tched off).... N\n- 0x003ed148 6f74653a 206e6f74 20617070 6c696564 ote: not applied\n- 0x003ed158 20746f20 72656164 7320696e 20636f6e to reads in con\n- 0x003ed168 74696773 210a0000 092d5820 3c696e74 tigs!....-X .Similar to\n- 0x003ed188 202d7820 62757420 6170706c 69657320 -x but applies \n- 0x003ed198 6f6e6c79 20746f20 72656164 7320616e only to reads an\n- 0x003ed1a8 640a0909 09207468 656e2074 6f207468 d.... then to th\n- 0x003ed1b8 6520636c 69707065 64206c65 6e677468 e clipped length\n- 0x003ed1c8 2e0a0000 092d7920 3c696e74 65676572 .....-y .Minimum averag\n- 0x003ed1e8 6520636f 6e746967 20636f76 65726167 e contig coverag\n- 0x003ed1f8 650a0909 09205768 656e206c 6f616469 e.... When loadi\n- 0x003ed208 6e672c20 64697363 61726420 616c6c20 ng, discard all \n- 0x003ed218 636f6e74 69677320 77697468 20616e0a contigs with an.\n- 0x003ed228 09090920 61766572 61676520 636f7665 ... average cove\n- 0x003ed238 72616765 206c6573 73207468 616e2074 rage less than t\n- 0x003ed248 68697320 76616c75 652e0a09 09092044 his value..... D\n- 0x003ed258 65666175 6c743a20 310a0000 092d7a20 efault: 1....-z \n- 0x003ed268 3c696e74 65676572 3e094d69 6e696d75 .Minimu\n- 0x003ed278 6d206e75 6d626572 206f6620 72656164 m number of read\n- 0x003ed288 7320696e 20636f6e 7469670a 09090920 s in contig.... \n- 0x003ed298 5768656e 206c6f61 64696e67 2c206469 When loading, di\n- 0x003ed2a8 73636172 6420616c 6c20636f 6e746967 scard all contig\n- 0x003ed2b8 73207769 74682061 0a090909 206e756d s with a.... num\n- 0x003ed2c8 62657220 6f662072 65616473 206c6573 ber of reads les\n- 0x003ed2d8 73207468 616e2074 68697320 76616c75 s than this valu\n- 0x003ed2e8 652e0a09 09092044 65666175 6c743a20 e..... Default: \n- 0x003ed2f8 3020283d 73776974 63686564 206f6666 0 (=switched off\n- 0x003ed308 290a0000 092d6c20 3c696e74 65676572 )....-l .when output as\n- 0x003ed328 20746578 74206f72 2048544d 4c3a206e text or HTML: n\n- 0x003ed338 756d6265 72206f66 20626173 65732073 umber of bases s\n- 0x003ed348 686f776e 20696e0a 09090920 6f6e6520 hown in.... one \n- 0x003ed358 616c6967 6e6d656e 74206c69 6e652e20 alignment line. \n- 0x003ed368 44656661 756c743a 2036302e 0a092d63 Default: 60...-c\n- 0x003ed378 203c6368 61726163 7465723e 09776865 .whe\n- 0x003ed388 6e206f75 74707574 20617320 74657874 n output as text\n- 0x003ed398 206f7220 48544d4c 3a206368 61726163 or HTML: charac\n- 0x003ed3a8 74657220 75736564 20746f20 7061640a ter used to pad.\n- 0x003ed3b8 09090920 656e6467 6170732e 20446566 ... endgaps. Def\n- 0x003ed3c8 61756c74 3a202720 27202862 6c616e6b ault: ' ' (blank\n- 0x003ed3d8 290a0000 0a457861 6d706c65 733a0a09 )....Examples:..\n- 0x003ed3e8 6d697261 636f6e76 65727420 736f7572 miraconvert sour\n- 0x003ed3f8 63652e6d 61662064 6573742e 73616d0a ce.maf dest.sam.\n- 0x003ed408 096d6972 61636f6e 76657274 20736f75 .miraconvert sou\n- 0x003ed418 7263652e 63616620 64657374 2e666173 rce.caf dest.fas\n- 0x003ed428 74612077 69672061 63650a09 6d697261 ta wig ace..mira\n- 0x003ed438 636f6e76 65727420 2d782032 30303020 convert -x 2000 \n- 0x003ed448 2d792031 3020736f 75726365 2e636166 -y 10 source.caf\n- 0x003ed458 20646573 742e6361 660a096d 69726163 dest.caf..mirac\n- 0x003ed468 6f6e7665 7274202d 78203430 202d4320 onvert -x 40 -C \n- 0x003ed478 2d46202d 4620736f 75726365 2e6d6166 -F -F source.maf\n- 0x003ed488 202e6661 7374710a 00000000 43486563 .fastq.....CHec\n- 0x003ed498 6b696e67 3a200000 466f756e 64206265 king: ..Found be\n- 0x003ed4a8 73742072 616e6765 3a200000 466f756e st range: ..Foun\n- 0x003ed4b8 64206d69 73617373 656d626c 79206279 d misassembly by\n- 0x003ed4c8 20726570 65617420 6d61726b 65722e20 repeat marker. \n- 0x003ed4d8 42657374 2072616e 67653a20 00000000 Best range: ....\n- 0x003ed4e8 31737420 636f766e 756d3a20 00000000 1st covnum: ....\n- 0x003ed4f8 43494e46 4f3a2000 326e6420 636f766e CINFO: .2nd covn\n- 0x003ed508 756d3a20 00000000 52656d6f 76656420 um: ....Removed \n- 0x003ed518 00000000 766f6964 20436f6e 7650726f ....void ConvPro\n- 0x003ed528 3a3a7370 65636961 6c546573 74436f64 ::specialTestCod\n- 0x003ed538 65287374 643a3a6c 6973743c 436f6e74 e(std::list & clist, Rea\n- 0x003ed558 64506f6f 6c202620 72702900 20636f75 dPool & rp). cou\n- 0x003ed568 6c64206e 6f742062 65206f70 656e6564 ld not be opened\n- 0x003ed578 20666f72 20777269 74696e67 2e20506f for writing. Po\n- 0x003ed588 73736962 6c652063 61757365 733a206e ssible causes: n\n- 0x003ed598 6f6e2d65 78697374 696e6720 6f722077 on-existing or w\n- 0x003ed5a8 72697465 2070726f 74656374 65642064 rite protected d\n- 0x003ed5b8 69726563 746f7279 3b206469 736b2071 irectory; disk q\n- 0x003ed5c8 756f7461 20657863 65656465 643b206f uota exceeded; o\n- 0x003ed5d8 74686572 732e0000 766f6964 20436f6e thers...void Con\n- 0x003ed5e8 7650726f 3a3a6f70 656e4f46 53747265 vPro::openOFStre\n- 0x003ed5f8 616d2873 74643a3a 6f667374 7265616d am(std::ofstream\n- 0x003ed608 2026206f 66732c20 7374643a 3a737472 & ofs, std::str\n- 0x003ed618 696e6720 666e616d 652c2073 74643a3a ing fname, std::\n- 0x003ed628 696f735f 62617365 3a3a6f70 656e6d6f ios_base::openmo\n- 0x003ed638 6465206d 6f646529 00000000 20636f75 de mode).... cou\n- 0x003ed648 6c64206e 6f742062 65206f70 656e6564 ld not be opened\n- 0x003ed658 20666f72 20726561 64696e67 2e20506f for reading. Po\n- 0x003ed668 73736962 6c652063 61757365 733a206e ssible causes: n\n- 0x003ed678 6f6e2d65 78697374 696e6720 64697265 on-existing dire\n- 0x003ed688 63746f72 793b206e 6f742061 6c6c6f77 ctory; not allow\n- 0x003ed698 65642074 6f207265 61642064 69726563 ed to read direc\n- 0x003ed6a8 746f7279 206f7220 66696c65 3b206f74 tory or file; ot\n- 0x003ed6b8 68657273 2e000000 686f776d 616e793e hers....howmany>\n- 0x003ed6c8 6f66732e 73697a65 2829203f 3f3f0000 ofs.size() ???..\n- 0x003ed6d8 75696e74 33322043 6f6e7650 726f3a3a uint32 ConvPro::\n- 0x003ed6e8 636c6f73 654f4653 4c697374 2875696e closeOFSList(uin\n- 0x003ed6f8 74333220 686f776d 616e7929 00000000 t32 howmany)....\n- 0x003ed708 2043505f 746f7479 70652e65 6d707479 CP_totype.empty\n- 0x003ed718 2829203f 3f3f0000 75696e74 33322043 () ???..uint32 C\n- 0x003ed728 6f6e7650 726f3a3a 6f70656e 4f46536c onvPro::openOFSl\n- 0x003ed738 69737428 436f6e74 6967202a 206f7074 ist(Contig * opt\n- 0x003ed748 636f6e74 69672c20 7374643a 3a6c6973 contig, std::lis\n- 0x003ed758 743c7374 643a3a6f 66737472 65616d20 t & ofs)...open\n- 0x003ed778 696e6720 00000000 66617374 61717561 ing ....fastaqua\n- 0x003ed788 6c000000 2e666173 74612e71 75616c00 l....fasta.qual.\n- 0x003ed798 6d61736b 65646661 73746100 6d61736b maskedfasta.mask\n- 0x003ed7a8 65646661 73746171 75616c00 73616d00 edfastaqual.sam.\n- 0x003ed7b8 73616d6e 62620000 2e73616d 00000000 samnbb...sam....\n- 0x003ed7c8 2e676666 33000000 4f6f6f70 733f2021 .gff3...Ooops? !\n- 0x003ed7d8 43505f6f 66732e65 6d707479 28292026 CP_ofs.empty() &\n- 0x003ed7e8 26204350 5f6f6673 2e73697a 65282920 & CP_ofs.size() \n- 0x003ed7f8 213d2043 505f746f 74797065 2e73697a != CP_totype.siz\n- 0x003ed808 65282920 3f3f3f00 766f6964 20436f6e e() ???.void Con\n- 0x003ed818 7650726f 3a3a7361 7665436f 6e746967 vPro::saveContig\n- 0x003ed828 4c697374 5f68656c 70657228 7374643a List_helper(std:\n- 0x003ed838 3a6c6973 743c436f 6e746967 3e202620 :list & \n- 0x003ed848 636c6973 742c2052 65616450 6f6f6c20 clist, ReadPool \n- 0x003ed858 26207270 29000000 68736e70 00000000 & rp)...hsnp....\n- 0x003ed868 2e68746d 6c000000 63737461 74730000 .html...cstats..\n- 0x003ed878 63726c69 73740000 61736e70 00000000 crlist..asnp....\n- 0x003ed888 66636f76 00000000 4f6f6f70 732c2053 fcov....Ooops, S\n- 0x003ed898 414d2073 74726561 6d206e6f 74206f70 AM stream not op\n- 0x003ed8a8 656e3f00 74657874 00000000 2e616365 en?.text.....ace\n- 0x003ed8b8 00000000 2e746373 00000000 77696767 .....tcs....wigg\n- 0x003ed8c8 6c650000 67637769 67676c65 00000000 le..gcwiggle....\n- 0x003ed8d8 2e776967 00000000 67637769 67000000 .wig....gcwig...\n- 0x003ed8e8 0a0a2d74 20000000 20697320 6e6f7420 ..-t ... is not \n- 0x003ed8f8 61207661 6c696420 27746f27 20747970 a valid 'to' typ\n- 0x003ed908 65207768 656e2063 6f6e7665 7274696e e when convertin\n- 0x003ed918 6720636f 6e746967 73202873 6f727279 g contigs (sorry\n- 0x003ed928 292e2042 7574206d 61796265 20736f6d ). But maybe som\n- 0x003ed938 65746869 6e672077 656e7420 77726f6e ething went wron\n- 0x003ed948 672c2070 6c656173 6520636f 6e746163 g, please contac\n- 0x003ed958 74207468 65206175 74686f72 2e0a0000 t the author....\n- 0x003ed968 5f676363 6f6e7465 6e742e77 69670000 _gccontent.wig..\n- 0x003ed978 5f636f6e 74696700 766f6964 20436f6e _contig.void Con\n- 0x003ed988 7650726f 3a3a7361 7665436f 6e746967 vPro::saveContig\n- 0x003ed998 4c697374 28737464 3a3a6c69 73743c43 List(std::list & clist, \n- 0x003ed9b8 52656164 506f6f6c 20262072 70290000 ReadPool & rp)..\n- 0x003ed9c8 536f7274 696e6720 706f6f6c 202e2e2e Sorting pool ...\n- 0x003ed9d8 00000000 666e6100 66610000 66710000 ....fna.fa..fq..\n- 0x003ed9e8 666f666e 65787000 556e6b6e 6f776e20 fofnexp.Unknown \n- 0x003ed9f8 6f722069 6c6c6567 616c2066 696c6520 or illegal file \n- 0x003eda08 74797065 20270000 27206465 66696e65 type '..' define\n- 0x003eda18 64206173 203c6672 6f6d7479 70653e0a d as .\n- 0x003eda28 00000000 436f6e76 50726f3a 3a636865 ....ConvPro::che\n- 0x003eda38 636b5479 7065733a 20556e6b 6e6f776e ckTypes: Unknown\n- 0x003eda48 206f7220 696c6c65 67616c20 66696c65 or illegal file\n- 0x003eda58 20747970 65202700 27206465 66696e65 type '.' define\n- 0x003eda68 64206173 203c746f 74797065 3e0a0000 d as ...\n- 0x003eda78 0a526561 6467726f 75702027 00000000 .Readgroup '....\n- 0x003eda88 27207365 656e206d 6f726520 7468616e ' seen more than\n- 0x003eda98 206f6e63 6520696e 204d4146 2066696c once in MAF fil\n- 0x003edaa8 652c2074 68697320 69732069 6c6c6567 e, this is illeg\n- 0x003edab8 616c2e0a 00000000 5f706169 7265645f al......_paired_\n- 0x003edac8 312e6661 73747100 5f706169 7265645f 1.fastq._paired_\n- 0x003edad8 322e6661 73747100 5f706169 7265642e 2.fastq._paired.\n- 0x003edae8 66617374 71000000 5f756e70 61697265 fastq..._unpaire\n- 0x003edaf8 642e6661 73747100 5f646562 7269732e d.fastq._debris.\n- 0x003edb08 66617374 71000000 4e616d69 6e672073 fastq...Naming s\n- 0x003edb18 6368656d 65202700 27206973 20756e6b cheme '.' is unk\n- 0x003edb28 6e6f776e 2e000000 766f6964 20436f6e nown....void Con\n- 0x003edb38 7650726f 3a3a7361 76655265 6164506f vPro::saveReadPo\n- 0x003edb48 6f6c2852 65616450 6f6f6c20 26207270 ol(ReadPool & rp\n- 0x003edb58 2c207374 643a3a6c 6973743c 7374643a , std::list & o\n- 0x003edb78 66732900 2f310000 2f320000 52656164 fs)./1../2..Read\n- 0x003edb88 20000000 20686173 20696c6c 6567616c ... has illegal\n- 0x003edb98 20736567 6d656e74 20000000 2066696c segment ... fil\n- 0x003edba8 65207374 7265616d 206e6f74 206f7065 e stream not ope\n- 0x003edbb8 6e3f3f3f 00000000 20697320 6e6f7420 n???.... is not \n- 0x003edbc8 61207661 6c696420 74797065 20666f72 a valid type for\n- 0x003edbd8 20736176 696e6720 61207265 6164706f saving a readpo\n- 0x003edbe8 6f6c2028 696e7465 726e616c 29210a00 ol (internal)!..\n- 0x003edbf8 636c6973 742e656d 70747928 29202626 clist.empty() &&\n- 0x003edc08 2072702e 73697a65 28293d3d 30000000 rp.size()==0...\n- 0x003edc18 766f6964 20436f6e 7650726f 3a3a6361 void ConvPro::ca\n- 0x003edc28 666d6166 6c6f6164 5f63616c 6c626163 fmafload_callbac\n- 0x003edc38 6b287374 643a3a6c 6973743c 436f6e74 k(std::list & clist, Rea\n- 0x003edc58 64506f6f 6c202620 72702900 55736520 dPool & rp).Use \n- 0x003edc68 272d6827 20746f20 67657420 61207368 '-h' to get a sh\n- 0x003edc78 6f727420 6f6e6c69 6e652068 656c702e ort online help.\n- 0x003edc88 00000000 4552524f 523a202d 63206d75 ....ERROR: -c mu\n- 0x003edc98 73742062 65206120 73696e67 6c652063 st be a single c\n- 0x003edca8 68617261 63746572 0a000000 4552524f haracter....ERRO\n- 0x003edcb8 523a202d 6c206d75 73742062 65203e3d R: -l must be >=\n- 0x003edcc8 300a0000 4552524f 523a202d 6f206d75 0...ERROR: -o mu\n- 0x003edcd8 73742062 65202030 203c3d20 76616c75 st be 0 <= valu\n- 0x003edce8 65203c3d 20313030 0a000000 4552524f e <= 100....ERRO\n- 0x003edcf8 523a202d 51206d75 73742062 65203c3d R: -Q must be <=\n- 0x003edd08 20313030 0a000000 4552524f 523a202d 100....ERROR: -\n- 0x003edd18 71206d75 73742062 65202030 203c3d20 q must be 0 <= \n- 0x003edd28 76616c75 65203c3d 20313030 0a000000 value <= 100....\n- 0x003edd38 4552524f 523a202d 72206d75 73742062 ERROR: -r must b\n- 0x003edd48 65206f6e 65206f66 20632c20 432c2071 e one of c, C, q\n- 0x003edd58 2c20662c 20720a00 4f6f6f6f 70733f20 , f, r..Oooops? \n- 0x003edd68 4b6e6f77 6e206275 7420756e 68616e64 Known but unhand\n- 0x003edd78 6c656420 6f707469 6f6e2000 203f0a00 led option . ?..\n- 0x003edd88 4d697373 696e6720 696e6669 6c652061 Missing infile a\n- 0x003edd98 6e64206f 75742d62 6173656e 616d6520 nd out-basename \n- 0x003edda8 61732061 7267756d 656e7473 210a0000 as arguments!...\n- 0x003eddb8 4d697373 696e6720 65697468 65722069 Missing either i\n- 0x003eddc8 6e66696c 65206f72 206f7574 2d626173 nfile or out-bas\n- 0x003eddd8 656e616d 65206173 20617267 756d656e ename as argumen\n- 0x003edde8 7473210a 00000000 2d2d6865 6c700000 ts!.....--help..\n- 0x003eddf8 4f757470 75742066 696c6520 00000000 Output file ....\n- 0x003ede08 20776f75 6c64206f 76657277 72697465 would overwrite\n- 0x003ede18 20696e70 75742066 696c6520 00000000 input file ....\n- 0x003ede28 4c6f6164 696e6720 66726f6d 20000000 Loading from ...\n- 0x003ede38 2c207361 76696e67 20746f3a 00000000 , saving to:....\n- 0x003ede48 73686f75 6c64206e 65766572 20617272 should never arr\n- 0x003ede58 69766520 68657265 21000000 696e7420 ive here!...int \n- 0x003ede68 6d61696e 436f6e76 50726f28 696e7420 mainConvPro(int \n- 0x003ede78 61726763 2c206368 6172202a 2a206172 argc, char ** ar\n- 0x003ede88 67762900 436f6c6c 65637469 6e672062 gv).Collecting b\n- 0x003ede98 61736963 2053414d 20696e66 6f206672 asic SAM info fr\n- 0x003edea8 6f6d204d 41462066 696c6500 0a0a6361 om MAF file...ca\n- 0x003edeb8 6e206f6e 6c792063 6f6e7665 7274204d n only convert M\n- 0x003edec8 41462074 6f205341 4d20666f 72207468 AF to SAM for th\n- 0x003eded8 65207469 6d652062 65696e67 2c20736f e time being, so\n- 0x003edee8 7272790a 00000000 75736520 2d710000 rry.....use -q..\n- 0x003edef8 466f7220 736f7274 696e6720 74686520 For sorting the \n- 0x003edf08 72656164 73206279 206e616d 652c206d reads by name, m\n- 0x003edf18 6f726520 52414d20 77696c6c 20626520 ore RAM will be \n- 0x003edf28 75736564 20617320 74686520 66756c6c used as the full\n- 0x003edf38 2066696c 65206e65 65647320 746f206c file needs to l\n- 0x003edf48 6f616420 696e746f 206d656d 6f72792e oad into memory.\n- 0x003edf58 0a000000 466f7220 67756573 73696e67 ....For guessing\n- 0x003edf68 20746865 20464153 5451206f 66667365 the FASTQ offse\n- 0x003edf78 742c206d 6f726520 52414d20 77696c6c t, more RAM will\n- 0x003edf88 20626520 75736564 20617320 74686520 be used as the \n- 0x003edf98 66756c6c 2066696c 65206e65 65647320 full file needs \n- 0x003edfa8 746f206c 6f616420 696e746f 206d656d to load into mem\n- 0x003edfb8 6f72792e 0a000000 20646f6e 652e0a00 ory..... done...\n- 0x003edfc8 57726974 74656e20 00000000 20626173 Written .... bas\n- 0x003edfd8 65732e00 0a446174 6120636f 6e766572 es...Data conver\n- 0x003edfe8 73696f6e 2070726f 63657373 2066696e sion process fin\n- 0x003edff8 69736865 642c206e 6f206f62 76696f75 ished, no obviou\n- 0x003ee008 73206572 726f7273 20656e63 6f756e74 s errors encount\n- 0x003ee018 65726564 2e0a0000 0a4e4f54 49434521 ered.....NOTICE!\n- 0x003ee028 20596f75 20636f6e 76657274 65642064 You converted d\n- 0x003ee038 61746120 77686963 68206861 7320636c ata which has cl\n- 0x003ee048 69707069 6e672069 6e666f72 6d617469 ipping informati\n- 0x003ee058 6f6e2028 43414620 6f72204d 41462920 on (CAF or MAF) \n- 0x003ee068 696e746f 20612066 6f726d61 74207768 into a format wh\n- 0x003ee078 69636820 646f6573 206e6f74 20636f6e ich does not con\n- 0x003ee088 7461696e 20636c69 7070696e 6720696e tain clipping in\n- 0x003ee098 666f726d 6174696f 6e2e2041 7320796f formation. As yo\n- 0x003ee0a8 75206469 64206e6f 74207573 65207468 u did not use th\n- 0x003ee0b8 6520272d 4327206f 7074696f 6e202870 e '-C' option (p\n- 0x003ee0c8 6572666f 726d2068 61726420 636c6970 erform hard clip\n- 0x003ee0d8 292c2079 6f757220 72657375 6c742066 ), your result f\n- 0x003ee0e8 696c6573 20646f20 636f6e74 61696e20 iles do contain \n- 0x003ee0f8 74686520 636f6d70 6c657465 20736571 the complete seq\n- 0x003ee108 75656e63 65732069 6e636c75 64696e67 uences including\n- 0x003ee118 20636c69 70706564 20706172 74732e20 clipped parts. \n- 0x003ee128 54686520 636c6970 70656420 70617274 The clipped part\n- 0x003ee138 73206f66 20726561 64732068 61766520 s of reads have \n- 0x003ee148 6265656e 20736574 20746f20 6c6f7765 been set to lowe\n- 0x003ee158 72206361 73652c20 74686520 756e636c r case, the uncl\n- 0x003ee168 69707065 64207061 72747320 68617665 ipped parts have\n- 0x003ee178 20757070 65722063 6173652e 0a496620 upper case..If \n- 0x003ee188 796f7520 646f206e 6f742077 616e7420 you do not want \n- 0x003ee198 746f2068 61766520 74686520 73657175 to have the sequ\n- 0x003ee1a8 656e6365 20636173 65206368 616e6765 ence case change\n- 0x003ee1b8 642c2075 73652027 2d41272e 20496620 d, use '-A'. If \n- 0x003ee1c8 796f7520 77616e74 20746865 20736571 you want the seq\n- 0x003ee1d8 75656e63 65207472 696d6d65 6420696e uence trimmed in\n- 0x003ee1e8 73746561 64206f66 20612063 61736520 stead of a case \n- 0x003ee1f8 6368616e 67652c20 75736520 272d4327 change, use '-C'\n- 0x003ee208 2e0a0000 0a574152 4e494e47 2120596f .....WARNING! Yo\n- 0x003ee218 7520636f 6e766572 74656420 64617461 u converted data\n- 0x003ee228 20776869 63682068 61732063 6c697070 which has clipp\n- 0x003ee238 696e6720 696e666f 726d6174 696f6e20 ing information \n- 0x003ee248 28434146 206f7220 4d414629 20696e74 (CAF or MAF) int\n- 0x003ee258 6f206120 666f726d 61742077 68696368 o a format which\n- 0x003ee268 20646f65 73206e6f 7420636f 6e746169 does not contai\n- 0x003ee278 6e20636c 69707069 6e672069 6e666f72 n clipping infor\n- 0x003ee288 6d617469 6f6e2e20 41732079 6f752064 mation. As you d\n- 0x003ee298 6964206e 6f742075 73652074 68652027 id not use the '\n- 0x003ee2a8 2d432720 6f707469 6f6e2028 70657266 -C' option (perf\n- 0x003ee2b8 6f726d20 68617264 20636c69 70292c20 orm hard clip), \n- 0x003ee2c8 796f7572 20726573 756c7420 66696c65 your result file\n- 0x003ee2d8 7320646f 20636f6e 7461696e 20746865 s do contain the\n- 0x003ee2e8 20636f6d 706c6574 65207365 7175656e complete sequen\n- 0x003ee2f8 63657320 696e636c 7564696e 6720636c ces including cl\n- 0x003ee308 69707065 64207061 7274732e 20467572 ipped parts. Fur\n- 0x003ee318 74686572 6d6f7265 2c20796f 75207573 thermore, you us\n- 0x003ee328 65642027 2d412720 746f2073 77697463 ed '-A' to switc\n- 0x003ee338 68206f66 66206164 61707469 6e672063 h off adapting c\n- 0x003ee348 61736520 666f7220 64656e6f 74696e67 ase for denoting\n- 0x003ee358 20636c69 70706564 20706172 74732069 clipped parts i\n- 0x003ee368 6e207365 7175656e 6365732e 20496620 n sequences. If \n- 0x003ee378 796f7520 646f206e 6f742077 616e7420 you do not want \n- 0x003ee388 74686973 2c207573 6520272d 43272e20 this, use '-C'. \n- 0x003ee398 4f722064 6f206e6f 74207573 6520272d Or do not use '-\n- 0x003ee3a8 41272e0a 00000000 61416243 64466869 A'......aAbCdFhi\n- 0x003ee3b8 6d4d7354 75765a63 3a663a6c 3a6e3a4e mMsTuvZc:f:l:n:N\n- 0x003ee3c8 3a6f3a50 3a713a51 3a723a52 3a533a74 :o:P:q:Q:r:R:S:t\n- 0x003ee3d8 3a563a78 3a583a79 3a593a7a 3a000000 :V:x:X:y:Y:z:...\n- 0x003ee3e8 766f6964 20526561 64436f6e 7461696e void ReadContain\n- 0x003ee3f8 65723a3a 736f7274 436f6e74 61696e65 er::sortContaine\n- 0x003ee408 72546f4d 49524153 74616e64 61726428 rToMIRAStandard(\n- 0x003ee418 636f6e73 74207374 643a3a76 6563746f const std::vecto\n- 0x003ee428 723c7569 6e743332 3e202620 736f7274 r & sort\n- 0x003ee438 6f726465 72290000 76656374 6f723a3a order)..vector::\n- 0x003ee448 72657365 72766500 7568206f 68202e2e reserve.uh oh ..\n- 0x003ee458 2e203432 39343936 37323935 20213d20 . 4294967295 != \n- 0x003ee468 73697a65 28290000 52435f70 6f6f6c72 size()..RC_poolr\n- 0x003ee478 7074725b 736f7274 6f726465 725b695d ptr[sortorder[i]\n- 0x003ee488 5d3d3d6e 756c6c70 7472203f 3f3f2044 ]==nullptr ??? D\n- 0x003ee498 69642079 6f752073 70656369 66792061 id you specify a\n- 0x003ee4a8 20726561 64207477 69636520 696e2079 read twice in y\n- 0x003ee4b8 6f757220 696e7075 7420666f 7220736f our input for so\n- 0x003ee4c8 7274696e 673f0000 5d200000 506c6561 rting?..] ..Plea\n- 0x003ee4d8 7365206f 6e6c7920 75736520 6b2c206d se only use k, m\n- 0x003ee4e8 2c206720 6173206d 6f646966 69657273 , g as modifiers\n- 0x003ee4f8 2e0a0000 0a0a6d69 72614d45 4d206865 ......miraMEM he\n- 0x003ee508 6c707320 796f7520 746f2065 7374696d lps you to estim\n- 0x003ee518 61746520 74686520 6d656d6f 7279206e ate the memory n\n- 0x003ee528 65656465 6420746f 20617373 656d626c eeded to assembl\n- 0x003ee538 65206120 70726f6a 6563742e 0a506c65 e a project..Ple\n- 0x003ee548 61736520 616e7377 65722074 68652071 ase answer the q\n- 0x003ee558 75657374 696f6e73 2062656c 6f772e0a uestions below..\n- 0x003ee568 0a446566 61756c74 73206172 65206769 .Defaults are gi\n- 0x003ee578 76652069 6e207371 75617265 20627261 ve in square bra\n- 0x003ee588 636b6574 7320616e 64206368 6f73656e ckets and chosen\n- 0x003ee598 20696620 796f7520 6a757374 20707265 if you just pre\n- 0x003ee5a8 73732072 65747572 6e2e0a48 696e743a ss return..Hint:\n- 0x003ee5b8 20796f75 2063616e 20616464 206b2f6d you can add k/m\n- 0x003ee5c8 2f67206d 6f646966 69657273 20746f20 /g modifiers to \n- 0x003ee5d8 796f7572 206e756d 62657273 20746f20 your numbers to \n- 0x003ee5e8 73617920 6b696c6f 2c206d65 6761206f say kilo, mega o\n- 0x003ee5f8 72206769 67612e0a 0a000000 49732069 r giga......Is i\n- 0x003ee608 74206120 67656e6f 6d65206f 72207472 t a genome or tr\n- 0x003ee618 616e7363 72697074 20284553 542f7461 anscript (EST/ta\n- 0x003ee628 672f6574 632e2920 70726f6a 6563743f g/etc.) project?\n- 0x003ee638 00000000 53697a65 206f6620 67656e6f ....Size of geno\n- 0x003ee648 6d653f00 41207365 7175656e 63652073 me?.A sequence s\n- 0x003ee658 697a6520 6f66206c 65737320 7468616e ize of less than\n- 0x003ee668 20313030 20626173 65732069 73207072 100 bases is pr\n- 0x003ee678 65747479 20696d70 726f6261 626c652e etty improbable.\n- 0x003ee688 0a000000 44696420 796f7520 666f7267 ....Did you forg\n- 0x003ee698 65742061 206d6f64 69666965 7220286b et a modifier (k\n- 0x003ee6a8 2c206d20 6f722067 2920746f 20746865 , m or g) to the\n- 0x003ee6b8 206e756d 62657220 796f7520 67617665 number you gave\n- 0x003ee6c8 3f0a0000 4c6f6f6b 73206c69 6b652061 ?...Looks like a\n- 0x003ee6d8 206c6172 67657220 65756b61 72796f74 larger eukaryot\n- 0x003ee6e8 652c2067 75657373 696e6720 6c617267 e, guessing larg\n- 0x003ee6f8 65737420 6368726f 6d6f736f 6d652073 est chromosome s\n- 0x003ee708 697a653a 2033306d 0a436861 6e676520 ize: 30m.Change \n- 0x003ee718 6966206e 65656465 64210a00 53697a65 if needed!..Size\n- 0x003ee728 206f6620 6c617267 65737420 6368726f of largest chro\n- 0x003ee738 6d6f736f 6d653f00 49732069 74206120 mosome?.Is it a \n- 0x003ee748 64656e6f 766f206f 72206d61 7070696e denovo or mappin\n- 0x003ee758 67206173 73656d62 6c793f00 4e756d62 g assembly?.Numb\n- 0x003ee768 6572206f 66205361 6e676572 20726561 er of Sanger rea\n- 0x003ee778 64733f00 41726520 74686572 65203435 ds?.Are there 45\n- 0x003ee788 34207265 6164733f 00000000 4e756d62 4 reads?....Numb\n- 0x003ee798 6572206f 66203435 34204753 32302072 er of 454 GS20 r\n- 0x003ee7a8 65616473 3f000000 4e756d62 6572206f eads?...Number o\n- 0x003ee7b8 66203435 3420464c 58207265 6164733f f 454 FLX reads?\n- 0x003ee7c8 00000000 4e756d62 6572206f 66203435 ....Number of 45\n- 0x003ee7d8 34205469 74616e69 756d2072 65616473 4 Titanium reads\n- 0x003ee7e8 3f000000 41726520 74686572 65205061 ?...Are there Pa\n- 0x003ee7f8 6342696f 20726561 64733f00 4e756d62 cBio reads?.Numb\n- 0x003ee808 6572206f 66205061 6342696f 20726561 er of PacBio rea\n- 0x003ee818 64733f00 41766572 61676520 50616342 ds?.Average PacB\n- 0x003ee828 696f206c 656e6774 683f0000 41726520 io length?..Are \n- 0x003ee838 74686572 6520536f 6c657861 20726561 there Solexa rea\n- 0x003ee848 64733f00 4e756d62 6572206f 6620536f ds?.Number of So\n- 0x003ee858 6c657861 20726561 64733f00 41766572 lexa reads?.Aver\n- 0x003ee868 61676520 536f6c65 7865206c 656e6774 age Solexe lengt\n- 0x003ee878 683f0000 0a0a2a2a 2a2a2a2a 2a2a2a2a h?....**********\n- 0x003ee888 2a2a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a20 *************** \n- 0x003ee898 45737469 6d617465 73202a2a 2a2a2a2a Estimates ******\n- 0x003ee8a8 2a2a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a2a ****************\n- 0x003ee8b8 2a2a2a0a 0a000000 45535420 61737365 ***.....EST asse\n- 0x003ee8c8 6d626c79 2c206361 6e6e6f74 20676976 mbly, cannot giv\n- 0x003ee8d8 6520636f 76657261 67652065 7374696d e coverage estim\n- 0x003ee8e8 6174652e 20416c73 6f2c2065 7374696d ate. Also, estim\n- 0x003ee8f8 61746573 0a6d6179 20626520 77617920 ates.may be way \n- 0x003ee908 6f666620 666f7220 70617468 6f6c6f67 off for patholog\n- 0x003ee918 6963616c 20636173 65732e0a 00000000 ical cases......\n- 0x003ee928 54686520 636f6e74 69677320 77696c6c The contigs will\n- 0x003ee938 20686176 6520616e 20617665 72616765 have an average\n- 0x003ee948 20636f76 65726167 65206f66 207e2000 coverage of ~ .\n- 0x003ee958 20282b2f 2d203130 25290a45 7374696d (+/- 10%).Estim\n- 0x003ee968 61746573 206d6179 20626520 77617920 ates may be way \n- 0x003ee978 6f666620 666f7220 70617468 6f6c6f67 off for patholog\n- 0x003ee988 6963616c 20636173 65732e0a 00000000 ical cases......\n- 0x003ee998 0a52414d 20657374 696d6174 65733a0a .RAM estimates:.\n- 0x003ee9a8 00000000 72656164 732b636f 6e746967 ....reads+contig\n- 0x003ee9b8 73202875 6e61766f 69646162 6c65293a s (unavoidable):\n- 0x003ee9c8 20000000 6c617267 65207461 626c6573 ...large tables\n- 0x003ee9d8 20287475 6e61626c 65293a20 00000000 (tunable): ....\n- 0x003ee9e8 746f7461 6c202870 65616b29 3a200000 total (peak): ..\n- 0x003ee9f8 61646420 69662075 73696e67 202d434c add if using -CL\n- 0x003eea08 3a70766c 633d7965 73203a20 00000000 :pvlc=yes : ....\n- 0x003eea18 61646420 69662073 65747469 6e67202d add if setting -\n- 0x003eea28 434f3a6d 73723d6e 6f203a20 00000000 CO:msr=no : ....\n- 0x003eea38 0a0a4e6f 74652074 68617420 736f6d65 ..Note that some\n- 0x003eea48 20616c67 6f726974 686d7320 6d696768 algorithms migh\n- 0x003eea58 74207472 7920746f 20677261 62206d6f t try to grab mo\n- 0x003eea68 7265206d 656d6f72 79206966 0a746865 re memory if.the\n- 0x003eea78 206e6565 64206172 69736573 20616e64 need arises and\n- 0x003eea88 20746865 20737973 74656d20 68617320 the system has \n- 0x003eea98 656e6f75 67682052 414d2e20 54686520 enough RAM. The \n- 0x003eeaa8 6f707469 6f6e730a 666f7220 6175746f options.for auto\n- 0x003eeab8 6d617469 63206d65 6d6f7279 206d616e matic memory man\n- 0x003eeac8 6167656d 656e7420 636f6e74 726f6c20 agement control \n- 0x003eead8 74686973 3a0a2020 2d41533a 616d6d2c this:. -AS:amm,\n- 0x003eeae8 202d4153 3a6b706d 662c202d 41533a6d -AS:kpmf, -AS:m\n- 0x003eeaf8 70730a46 75727468 65722073 77697463 ps.Further switc\n- 0x003eeb08 68657320 74686174 206d6967 68742072 hes that might r\n- 0x003eeb18 65647563 65205241 4d202861 7420636f educe RAM (at co\n- 0x003eeb28 7374206f 66207275 6e207469 6d650a6f st of run time.o\n- 0x003eeb38 72206163 63757261 6379293a 0a20202d r accuracy):. -\n- 0x003eeb48 534b3a6d 68696d2c 202d534b 3a6d6368 SK:mhim, -SK:mch\n- 0x003eeb58 72202862 6f746820 72756e74 696d6529 r (both runtime)\n- 0x003eeb68 3b202d53 4b3a6d68 70722028 61636375 ; -SK:mhpr (accu\n- 0x003eeb78 72616379 290a2a2a 2a2a2a2a 2a2a2a2a racy).**********\n- 0x003eeb88 2a2a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a2a ****************\n+ 0x003ecaf8 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d0a ---------------.\n+ 0x003ecb08 0a000000 092d4d09 09446f20 6e6f7420 .....-M..Do not \n+ 0x003ecb18 65787472 61637420 636f6e74 69677320 extract contigs \n+ 0x003ecb28 286f7220 74686569 7220636f 6e73656e (or their consen\n+ 0x003ecb38 73757329 2c206275 74207468 650a0909 sus), but the...\n+ 0x003ecb48 09202073 65717565 6e636520 6f662074 . sequence of t\n+ 0x003ecb58 68652072 65616473 20746865 79206172 he reads they ar\n+ 0x003ecb68 6520636f 6d706f73 6564206f 662e0a00 e composed of...\n+ 0x003ecb78 092d7220 5b634371 665d0952 6563616c .-r [cCqf].Recal\n+ 0x003ecb88 63756c61 74652063 6f6e7365 6e737573 culate consensus\n+ 0x003ecb98 20616e64 202f206f 7220636f 6e73656e and / or consen\n+ 0x003ecba8 73757320 7175616c 69747920 76616c75 sus quality valu\n+ 0x003ecbb8 65730a09 09092061 6e64202f 206f7220 es.... and / or \n+ 0x003ecbc8 534e5020 66656174 75726520 74616773 SNP feature tags\n+ 0x003ecbd8 2e0a0909 09202763 27207265 63616c63 ..... 'c' recalc\n+ 0x003ecbe8 20636f6e 73202620 636f6e73 20717561 cons & cons qua\n+ 0x003ecbf8 6c697469 65732028 77697468 20495550 lities (with IUP\n+ 0x003ecc08 4143290a 09090920 27432720 72656361 AC).... 'C' reca\n+ 0x003ecc18 6c632063 6f6e7320 2620636f 6e732071 lc cons & cons q\n+ 0x003ecc28 75616c69 74696573 2028666f 7263696e ualities (forcin\n+ 0x003ecc38 67206e6f 6e2d4955 50414329 0a090909 g non-IUPAC)....\n+ 0x003ecc48 20277127 20726563 616c6320 636f6e73 'q' recalc cons\n+ 0x003ecc58 656e7375 73207175 616c6974 69657320 ensus qualities \n+ 0x003ecc68 6f6e6c79 0a090909 20276627 20726563 only.... 'f' rec\n+ 0x003ecc78 616c6320 534e5020 66656174 75726573 alc SNP features\n+ 0x003ecc88 0a090909 204e6f74 653a206f 6e6c7920 .... Note: only \n+ 0x003ecc98 74686520 6c617374 206f6620 63437120 the last of cCq \n+ 0x003ecca8 69732072 656c6576 616e742c 20662077 is relevant, f w\n+ 0x003eccb8 6f726b73 20617320 610a0909 09202073 orks as a.... s\n+ 0x003eccc8 77697463 6820616e 64206361 6e206265 witch and can be\n+ 0x003eccd8 20636f6d 62696e65 64207769 74682063 combined with c\n+ 0x003ecce8 51712028 652e672e 20222d72 2043202d Qq (e.g. \"-r C -\n+ 0x003eccf8 72206622 290a0909 09204e6f 74653a20 r f\").... Note: \n+ 0x003ecd08 69662074 68652043 41462f4d 41462063 if the CAF/MAF c\n+ 0x003ecd18 6f6e7461 696e7320 6d756c74 69706c65 ontains multiple\n+ 0x003ecd28 20737472 61696e73 2c0a0909 09207265 strains,.... re\n+ 0x003ecd38 63616c63 756c6174 696f6e20 6f662063 calculation of c\n+ 0x003ecd48 6f6e7320 2620636f 6e732071 75616c69 ons & cons quali\n+ 0x003ecd58 74696573 20697320 666f7263 65642c20 ties is forced, \n+ 0x003ecd68 796f750a 09090920 2063616e 206a7573 you.... can jus\n+ 0x003ecd78 7420696e 666c7565 6e636520 77686574 t influence whet\n+ 0x003ecd88 68657220 49555041 43732061 72652075 her IUPACs are u\n+ 0x003ecd98 73656420 6f72206e 6f742e0a 00000000 sed or not......\n+ 0x003ecda8 092d7309 0973706c 6974206f 75747075 .-s..split outpu\n+ 0x003ecdb8 7420696e 746f206d 756c7469 706c6520 t into multiple \n+ 0x003ecdc8 66696c65 7320696e 73746561 64206f66 files instead of\n+ 0x003ecdd8 20637265 6174696e 6720610a 09090920 creating a.... \n+ 0x003ecde8 73696e67 6c652066 696c650a 00000000 single file.....\n+ 0x003ecdf8 092d7509 09276669 6c6c5570 20737472 .-u..'fillUp str\n+ 0x003ece08 61696e20 67656e6f 6d657327 0a090909 ain genomes'....\n+ 0x003ece18 2046696c 6c20686f 6c657320 696e2074 Fill holes in t\n+ 0x003ece28 68652067 656e6f6d 65206f66 206f6e65 he genome of one\n+ 0x003ece38 20737472 61696e20 284e206f 72204029 strain (N or @)\n+ 0x003ece48 0a090909 20776974 68207365 7175656e .... with sequen\n+ 0x003ece58 63652066 726f6d20 6120636f 6e73656e ce from a consen\n+ 0x003ece68 73757320 6f66206f 74686572 20737472 sus of other str\n+ 0x003ece78 61696e73 0a090909 2054616b 65732065 ains.... Takes e\n+ 0x003ece88 66666563 74206f6e 6c792077 69746820 ffect only with \n+ 0x003ece98 2d722061 6e64202d 74206762 66206f72 -r and -t gbf or\n+ 0x003ecea8 20666173 74612f71 0a090909 20696e20 fasta/q.... in \n+ 0x003eceb8 46415354 412f513a 20626173 65732066 FASTA/Q: bases f\n+ 0x003ecec8 696c6c65 64207570 20617265 20696e20 illed up are in \n+ 0x003eced8 6c6f7765 72206361 73650a09 09092069 lower case.... i\n+ 0x003ecee8 6e204742 463a2062 61736573 2066696c n GBF: bases fil\n+ 0x003ecef8 6c656420 75702061 72652069 6e207570 led up are in up\n+ 0x003ecf08 70657220 63617365 0a000000 092d5120 per case.....-Q \n+ 0x003ecf18 3c696e74 65676572 3e094465 66696e65 .Define\n+ 0x003ecf28 73206d69 6e696d75 6d207175 616c6974 s minimum qualit\n+ 0x003ecf38 79206120 636f6e73 656e7375 73206261 y a consensus ba\n+ 0x003ecf48 7365206f 66206120 73747261 696e0a09 se of a strain..\n+ 0x003ecf58 0909206d 75737420 68617665 2c20636f .. must have, co\n+ 0x003ecf68 6e73656e 73757320 62617365 73206265 nsensus bases be\n+ 0x003ecf78 6c6f7720 74686973 2077696c 6c206265 low this will be\n+ 0x003ecf88 20274e27 0a090909 20446566 61756c74 'N'.... Default\n+ 0x003ecf98 3a20300a 09090920 4f6e6c79 20757365 : 0.... Only use\n+ 0x003ecfa8 64207769 7468202d 722c2061 6e64202d d with -r, and -\n+ 0x003ecfb8 66206973 20636166 2f6d6166 20616e64 f is caf/maf and\n+ 0x003ecfc8 202d7420 69732028 66617374 610a0909 -t is (fasta...\n+ 0x003ecfd8 0920206f 72206762 66290a00 092d5620 . or gbf)...-V \n+ 0x003ecfe8 3c696e74 65676572 3e094465 66696e65 .Define\n+ 0x003ecff8 73206d69 6e696d75 6d20636f 76657261 s minimum covera\n+ 0x003ed008 67652061 20636f6e 73656e73 75732062 ge a consensus b\n+ 0x003ed018 61736520 6f662061 20737472 61696e0a ase of a strain.\n+ 0x003ed028 09090920 6d757374 20686176 652c2062 ... must have, b\n+ 0x003ed038 61736573 20776974 6820636f 76657261 ases with covera\n+ 0x003ed048 67652062 656c6f77 20746869 73207769 ge below this wi\n+ 0x003ed058 6c6c2062 6520274e 270a0909 09204465 ll be 'N'.... De\n+ 0x003ed068 6661756c 743a2030 0a090909 204f6e6c fault: 0.... Onl\n+ 0x003ed078 79207573 65642077 69746820 2d722c20 y used with -r, \n+ 0x003ed088 616e6420 2d742069 73202866 61737461 and -t is (fasta\n+ 0x003ed098 0a090909 20206f72 20676266 290a0000 .... or gbf)...\n+ 0x003ed0a8 092d7820 3c696e74 65676572 3e094d69 .-x .Mi\n+ 0x003ed0b8 6e696d75 6d20636f 6e746967 206f7220 nimum contig or \n+ 0x003ed0c8 756e636c 69707065 64207265 6164206c unclipped read l\n+ 0x003ed0d8 656e6774 680a0909 09205768 656e206c ength.... When l\n+ 0x003ed0e8 6f616469 6e672c20 64697363 61726420 oading, discard \n+ 0x003ed0f8 616c6c20 636f6e74 69677320 2f207265 all contigs / re\n+ 0x003ed108 61647320 77697468 20610a09 0909206c ads with a.... l\n+ 0x003ed118 656e6774 68206c65 73732074 68616e20 ength less than \n+ 0x003ed128 74686973 2076616c 75652e20 44656661 this value. Defa\n+ 0x003ed138 756c743a 20302028 3d737769 74636865 ult: 0 (=switche\n+ 0x003ed148 64206f66 66290a09 0909204e 6f74653a d off).... Note:\n+ 0x003ed158 206e6f74 20617070 6c696564 20746f20 not applied to \n+ 0x003ed168 72656164 7320696e 20636f6e 74696773 reads in contigs\n+ 0x003ed178 210a0000 092d5820 3c696e74 65676572 !....-X .Similar to -x \n+ 0x003ed198 62757420 6170706c 69657320 6f6e6c79 but applies only\n+ 0x003ed1a8 20746f20 72656164 7320616e 640a0909 to reads and...\n+ 0x003ed1b8 09207468 656e2074 6f207468 6520636c . then to the cl\n+ 0x003ed1c8 69707065 64206c65 6e677468 2e0a0000 ipped length....\n+ 0x003ed1d8 092d7920 3c696e74 65676572 3e094d69 .-y .Mi\n+ 0x003ed1e8 6e696d75 6d206176 65726167 6520636f nimum average co\n+ 0x003ed1f8 6e746967 20636f76 65726167 650a0909 ntig coverage...\n+ 0x003ed208 09205768 656e206c 6f616469 6e672c20 . When loading, \n+ 0x003ed218 64697363 61726420 616c6c20 636f6e74 discard all cont\n+ 0x003ed228 69677320 77697468 20616e0a 09090920 igs with an.... \n+ 0x003ed238 61766572 61676520 636f7665 72616765 average coverage\n+ 0x003ed248 206c6573 73207468 616e2074 68697320 less than this \n+ 0x003ed258 76616c75 652e0a09 09092044 65666175 value..... Defau\n+ 0x003ed268 6c743a20 310a0000 092d7a20 3c696e74 lt: 1....-z .Minimum nu\n+ 0x003ed288 6d626572 206f6620 72656164 7320696e mber of reads in\n+ 0x003ed298 20636f6e 7469670a 09090920 5768656e contig.... When\n+ 0x003ed2a8 206c6f61 64696e67 2c206469 73636172 loading, discar\n+ 0x003ed2b8 6420616c 6c20636f 6e746967 73207769 d all contigs wi\n+ 0x003ed2c8 74682061 0a090909 206e756d 62657220 th a.... number \n+ 0x003ed2d8 6f662072 65616473 206c6573 73207468 of reads less th\n+ 0x003ed2e8 616e2074 68697320 76616c75 652e0a09 an this value...\n+ 0x003ed2f8 09092044 65666175 6c743a20 3020283d .. Default: 0 (=\n+ 0x003ed308 73776974 63686564 206f6666 290a0000 switched off)...\n+ 0x003ed318 092d6c20 3c696e74 65676572 3e097768 .-l .wh\n+ 0x003ed328 656e206f 75747075 74206173 20746578 en output as tex\n+ 0x003ed338 74206f72 2048544d 4c3a206e 756d6265 t or HTML: numbe\n+ 0x003ed348 72206f66 20626173 65732073 686f776e r of bases shown\n+ 0x003ed358 20696e0a 09090920 6f6e6520 616c6967 in.... one alig\n+ 0x003ed368 6e6d656e 74206c69 6e652e20 44656661 nment line. Defa\n+ 0x003ed378 756c743a 2036302e 0a092d63 203c6368 ult: 60...-c .when ou\n+ 0x003ed398 74707574 20617320 74657874 206f7220 tput as text or \n+ 0x003ed3a8 48544d4c 3a206368 61726163 74657220 HTML: character \n+ 0x003ed3b8 75736564 20746f20 7061640a 09090920 used to pad.... \n+ 0x003ed3c8 656e6467 6170732e 20446566 61756c74 endgaps. Default\n+ 0x003ed3d8 3a202720 27202862 6c616e6b 290a0000 : ' ' (blank)...\n+ 0x003ed3e8 0a457861 6d706c65 733a0a09 6d697261 .Examples:..mira\n+ 0x003ed3f8 636f6e76 65727420 736f7572 63652e6d convert source.m\n+ 0x003ed408 61662064 6573742e 73616d0a 096d6972 af dest.sam..mir\n+ 0x003ed418 61636f6e 76657274 20736f75 7263652e aconvert source.\n+ 0x003ed428 63616620 64657374 2e666173 74612077 caf dest.fasta w\n+ 0x003ed438 69672061 63650a09 6d697261 636f6e76 ig ace..miraconv\n+ 0x003ed448 65727420 2d782032 30303020 2d792031 ert -x 2000 -y 1\n+ 0x003ed458 3020736f 75726365 2e636166 20646573 0 source.caf des\n+ 0x003ed468 742e6361 660a096d 69726163 6f6e7665 t.caf..miraconve\n+ 0x003ed478 7274202d 78203430 202d4320 2d46202d rt -x 40 -C -F -\n+ 0x003ed488 4620736f 75726365 2e6d6166 202e6661 F source.maf .fa\n+ 0x003ed498 7374710a 00000000 43486563 6b696e67 stq.....CHecking\n+ 0x003ed4a8 3a200000 466f756e 64206265 73742072 : ..Found best r\n+ 0x003ed4b8 616e6765 3a200000 466f756e 64206d69 ange: ..Found mi\n+ 0x003ed4c8 73617373 656d626c 79206279 20726570 sassembly by rep\n+ 0x003ed4d8 65617420 6d61726b 65722e20 42657374 eat marker. Best\n+ 0x003ed4e8 2072616e 67653a20 00000000 31737420 range: ....1st \n+ 0x003ed4f8 636f766e 756d3a20 00000000 43494e46 covnum: ....CINF\n+ 0x003ed508 4f3a2000 326e6420 636f766e 756d3a20 O: .2nd covnum: \n+ 0x003ed518 00000000 52656d6f 76656420 00000000 ....Removed ....\n+ 0x003ed528 766f6964 20436f6e 7650726f 3a3a7370 void ConvPro::sp\n+ 0x003ed538 65636961 6c546573 74436f64 65287374 ecialTestCode(st\n+ 0x003ed548 643a3a6c 6973743c 436f6e74 69673e20 d::list \n+ 0x003ed558 2620636c 6973742c 20526561 64506f6f & clist, ReadPoo\n+ 0x003ed568 6c202620 72702900 20636f75 6c64206e l & rp). could n\n+ 0x003ed578 6f742062 65206f70 656e6564 20666f72 ot be opened for\n+ 0x003ed588 20777269 74696e67 2e20506f 73736962 writing. Possib\n+ 0x003ed598 6c652063 61757365 733a206e 6f6e2d65 le causes: non-e\n+ 0x003ed5a8 78697374 696e6720 6f722077 72697465 xisting or write\n+ 0x003ed5b8 2070726f 74656374 65642064 69726563 protected direc\n+ 0x003ed5c8 746f7279 3b206469 736b2071 756f7461 tory; disk quota\n+ 0x003ed5d8 20657863 65656465 643b206f 74686572 exceeded; other\n+ 0x003ed5e8 732e0000 766f6964 20436f6e 7650726f s...void ConvPro\n+ 0x003ed5f8 3a3a6f70 656e4f46 53747265 616d2873 ::openOFStream(s\n+ 0x003ed608 74643a3a 6f667374 7265616d 2026206f td::ofstream & o\n+ 0x003ed618 66732c20 7374643a 3a737472 696e6720 fs, std::string \n+ 0x003ed628 666e616d 652c2073 74643a3a 696f735f fname, std::ios_\n+ 0x003ed638 62617365 3a3a6f70 656e6d6f 6465206d base::openmode m\n+ 0x003ed648 6f646529 00000000 20636f75 6c64206e ode).... could n\n+ 0x003ed658 6f742062 65206f70 656e6564 20666f72 ot be opened for\n+ 0x003ed668 20726561 64696e67 2e20506f 73736962 reading. Possib\n+ 0x003ed678 6c652063 61757365 733a206e 6f6e2d65 le causes: non-e\n+ 0x003ed688 78697374 696e6720 64697265 63746f72 xisting director\n+ 0x003ed698 793b206e 6f742061 6c6c6f77 65642074 y; not allowed t\n+ 0x003ed6a8 6f207265 61642064 69726563 746f7279 o read directory\n+ 0x003ed6b8 206f7220 66696c65 3b206f74 68657273 or file; others\n+ 0x003ed6c8 2e000000 686f776d 616e793e 6f66732e ....howmany>ofs.\n+ 0x003ed6d8 73697a65 2829203f 3f3f0000 75696e74 size() ???..uint\n+ 0x003ed6e8 33322043 6f6e7650 726f3a3a 636c6f73 32 ConvPro::clos\n+ 0x003ed6f8 654f4653 4c697374 2875696e 74333220 eOFSList(uint32 \n+ 0x003ed708 686f776d 616e7929 00000000 2043505f howmany).... CP_\n+ 0x003ed718 746f7479 70652e65 6d707479 2829203f totype.empty() ?\n+ 0x003ed728 3f3f0000 75696e74 33322043 6f6e7650 ??..uint32 ConvP\n+ 0x003ed738 726f3a3a 6f70656e 4f46536c 69737428 ro::openOFSlist(\n+ 0x003ed748 436f6e74 6967202a 206f7074 636f6e74 Contig * optcont\n+ 0x003ed758 69672c20 7374643a 3a6c6973 743c7374 ig, std::list &\n+ 0x003ed778 206f6673 29000000 6f70656e 696e6720 ofs)...opening \n+ 0x003ed788 00000000 66617374 61717561 6c000000 ....fastaqual...\n+ 0x003ed798 2e666173 74612e71 75616c00 6d61736b .fasta.qual.mask\n+ 0x003ed7a8 65646661 73746100 6d61736b 65646661 edfasta.maskedfa\n+ 0x003ed7b8 73746171 75616c00 73616d00 73616d6e staqual.sam.samn\n+ 0x003ed7c8 62620000 2e73616d 00000000 2e676666 bb...sam.....gff\n+ 0x003ed7d8 33000000 4f6f6f70 733f2021 43505f6f 3...Ooops? !CP_o\n+ 0x003ed7e8 66732e65 6d707479 28292026 26204350 fs.empty() && CP\n+ 0x003ed7f8 5f6f6673 2e73697a 65282920 213d2043 _ofs.size() != C\n+ 0x003ed808 505f746f 74797065 2e73697a 65282920 P_totype.size() \n+ 0x003ed818 3f3f3f00 766f6964 20436f6e 7650726f ???.void ConvPro\n+ 0x003ed828 3a3a7361 7665436f 6e746967 4c697374 ::saveContigList\n+ 0x003ed838 5f68656c 70657228 7374643a 3a6c6973 _helper(std::lis\n+ 0x003ed848 743c436f 6e746967 3e202620 636c6973 t & clis\n+ 0x003ed858 742c2052 65616450 6f6f6c20 26207270 t, ReadPool & rp\n+ 0x003ed868 29000000 68736e70 00000000 2e68746d )...hsnp.....htm\n+ 0x003ed878 6c000000 63737461 74730000 63726c69 l...cstats..crli\n+ 0x003ed888 73740000 61736e70 00000000 66636f76 st..asnp....fcov\n+ 0x003ed898 00000000 4f6f6f70 732c2053 414d2073 ....Ooops, SAM s\n+ 0x003ed8a8 74726561 6d206e6f 74206f70 656e3f00 tream not open?.\n+ 0x003ed8b8 74657874 00000000 2e616365 00000000 text.....ace....\n+ 0x003ed8c8 2e746373 00000000 77696767 6c650000 .tcs....wiggle..\n+ 0x003ed8d8 67637769 67676c65 00000000 2e776967 gcwiggle.....wig\n+ 0x003ed8e8 00000000 67637769 67000000 0a0a2d74 ....gcwig.....-t\n+ 0x003ed8f8 20000000 20697320 6e6f7420 61207661 ... is not a va\n+ 0x003ed908 6c696420 27746f27 20747970 65207768 lid 'to' type wh\n+ 0x003ed918 656e2063 6f6e7665 7274696e 6720636f en converting co\n+ 0x003ed928 6e746967 73202873 6f727279 292e2042 ntigs (sorry). B\n+ 0x003ed938 7574206d 61796265 20736f6d 65746869 ut maybe somethi\n+ 0x003ed948 6e672077 656e7420 77726f6e 672c2070 ng went wrong, p\n+ 0x003ed958 6c656173 6520636f 6e746163 74207468 lease contact th\n+ 0x003ed968 65206175 74686f72 2e0a0000 5f676363 e author...._gcc\n+ 0x003ed978 6f6e7465 6e742e77 69670000 5f636f6e ontent.wig.._con\n+ 0x003ed988 74696700 766f6964 20436f6e 7650726f tig.void ConvPro\n+ 0x003ed998 3a3a7361 7665436f 6e746967 4c697374 ::saveContigList\n+ 0x003ed9a8 28737464 3a3a6c69 73743c43 6f6e7469 (std::list & clist, Read\n+ 0x003ed9c8 506f6f6c 20262072 70290000 536f7274 Pool & rp)..Sort\n+ 0x003ed9d8 696e6720 706f6f6c 202e2e2e 00000000 ing pool .......\n+ 0x003ed9e8 666e6100 66610000 66710000 666f666e fna.fa..fq..fofn\n+ 0x003ed9f8 65787000 556e6b6e 6f776e20 6f722069 exp.Unknown or i\n+ 0x003eda08 6c6c6567 616c2066 696c6520 74797065 llegal file type\n+ 0x003eda18 20270000 27206465 66696e65 64206173 '..' defined as\n+ 0x003eda28 203c6672 6f6d7479 70653e0a 00000000 .....\n+ 0x003eda38 436f6e76 50726f3a 3a636865 636b5479 ConvPro::checkTy\n+ 0x003eda48 7065733a 20556e6b 6e6f776e 206f7220 pes: Unknown or \n+ 0x003eda58 696c6c65 67616c20 66696c65 20747970 illegal file typ\n+ 0x003eda68 65202700 27206465 66696e65 64206173 e '.' defined as\n+ 0x003eda78 203c746f 74797065 3e0a0000 0a526561 ....Rea\n+ 0x003eda88 6467726f 75702027 00000000 27207365 dgroup '....' se\n+ 0x003eda98 656e206d 6f726520 7468616e 206f6e63 en more than onc\n+ 0x003edaa8 6520696e 204d4146 2066696c 652c2074 e in MAF file, t\n+ 0x003edab8 68697320 69732069 6c6c6567 616c2e0a his is illegal..\n+ 0x003edac8 00000000 5f706169 7265645f 312e6661 ...._paired_1.fa\n+ 0x003edad8 73747100 5f706169 7265645f 322e6661 stq._paired_2.fa\n+ 0x003edae8 73747100 5f706169 7265642e 66617374 stq._paired.fast\n+ 0x003edaf8 71000000 5f756e70 61697265 642e6661 q..._unpaired.fa\n+ 0x003edb08 73747100 5f646562 7269732e 66617374 stq._debris.fast\n+ 0x003edb18 71000000 4e616d69 6e672073 6368656d q...Naming schem\n+ 0x003edb28 65202700 27206973 20756e6b 6e6f776e e '.' is unknown\n+ 0x003edb38 2e000000 766f6964 20436f6e 7650726f ....void ConvPro\n+ 0x003edb48 3a3a7361 76655265 6164506f 6f6c2852 ::saveReadPool(R\n+ 0x003edb58 65616450 6f6f6c20 26207270 2c207374 eadPool & rp, st\n+ 0x003edb68 643a3a6c 6973743c 7374643a 3a6f6673 d::list & ofs).\n+ 0x003edb88 2f310000 2f320000 52656164 20000000 /1../2..Read ...\n+ 0x003edb98 20686173 20696c6c 6567616c 20736567 has illegal seg\n+ 0x003edba8 6d656e74 20000000 2066696c 65207374 ment ... file st\n+ 0x003edbb8 7265616d 206e6f74 206f7065 6e3f3f3f ream not open???\n+ 0x003edbc8 00000000 20697320 6e6f7420 61207661 .... is not a va\n+ 0x003edbd8 6c696420 74797065 20666f72 20736176 lid type for sav\n+ 0x003edbe8 696e6720 61207265 6164706f 6f6c2028 ing a readpool (\n+ 0x003edbf8 696e7465 726e616c 29210a00 636c6973 internal)!..clis\n+ 0x003edc08 742e656d 70747928 29202626 2072702e t.empty() && rp.\n+ 0x003edc18 73697a65 28293d3d 30000000 766f6964 size()==0...void\n+ 0x003edc28 20436f6e 7650726f 3a3a6361 666d6166 ConvPro::cafmaf\n+ 0x003edc38 6c6f6164 5f63616c 6c626163 6b287374 load_callback(st\n+ 0x003edc48 643a3a6c 6973743c 436f6e74 69673e20 d::list \n+ 0x003edc58 2620636c 6973742c 20526561 64506f6f & clist, ReadPoo\n+ 0x003edc68 6c202620 72702900 55736520 272d6827 l & rp).Use '-h'\n+ 0x003edc78 20746f20 67657420 61207368 6f727420 to get a short \n+ 0x003edc88 6f6e6c69 6e652068 656c702e 00000000 online help.....\n+ 0x003edc98 4552524f 523a202d 63206d75 73742062 ERROR: -c must b\n+ 0x003edca8 65206120 73696e67 6c652063 68617261 e a single chara\n+ 0x003edcb8 63746572 0a000000 4552524f 523a202d cter....ERROR: -\n+ 0x003edcc8 6c206d75 73742062 65203e3d 300a0000 l must be >=0...\n+ 0x003edcd8 4552524f 523a202d 6f206d75 73742062 ERROR: -o must b\n+ 0x003edce8 65202030 203c3d20 76616c75 65203c3d e 0 <= value <=\n+ 0x003edcf8 20313030 0a000000 4552524f 523a202d 100....ERROR: -\n+ 0x003edd08 51206d75 73742062 65203c3d 20313030 Q must be <= 100\n+ 0x003edd18 0a000000 4552524f 523a202d 71206d75 ....ERROR: -q mu\n+ 0x003edd28 73742062 65202030 203c3d20 76616c75 st be 0 <= valu\n+ 0x003edd38 65203c3d 20313030 0a000000 4552524f e <= 100....ERRO\n+ 0x003edd48 523a202d 72206d75 73742062 65206f6e R: -r must be on\n+ 0x003edd58 65206f66 20632c20 432c2071 2c20662c e of c, C, q, f,\n+ 0x003edd68 20720a00 4f6f6f6f 70733f20 4b6e6f77 r..Oooops? Know\n+ 0x003edd78 6e206275 7420756e 68616e64 6c656420 n but unhandled \n+ 0x003edd88 6f707469 6f6e2000 203f0a00 4d697373 option . ?..Miss\n+ 0x003edd98 696e6720 696e6669 6c652061 6e64206f ing infile and o\n+ 0x003edda8 75742d62 6173656e 616d6520 61732061 ut-basename as a\n+ 0x003eddb8 7267756d 656e7473 210a0000 4d697373 rguments!...Miss\n+ 0x003eddc8 696e6720 65697468 65722069 6e66696c ing either infil\n+ 0x003eddd8 65206f72 206f7574 2d626173 656e616d e or out-basenam\n+ 0x003edde8 65206173 20617267 756d656e 7473210a e as arguments!.\n+ 0x003eddf8 00000000 2d2d6865 6c700000 4f757470 ....--help..Outp\n+ 0x003ede08 75742066 696c6520 00000000 20776f75 ut file .... wou\n+ 0x003ede18 6c64206f 76657277 72697465 20696e70 ld overwrite inp\n+ 0x003ede28 75742066 696c6520 00000000 4c6f6164 ut file ....Load\n+ 0x003ede38 696e6720 66726f6d 20000000 2c207361 ing from ..., sa\n+ 0x003ede48 76696e67 20746f3a 00000000 73686f75 ving to:....shou\n+ 0x003ede58 6c64206e 65766572 20617272 69766520 ld never arrive \n+ 0x003ede68 68657265 21000000 696e7420 6d61696e here!...int main\n+ 0x003ede78 436f6e76 50726f28 696e7420 61726763 ConvPro(int argc\n+ 0x003ede88 2c206368 6172202a 2a206172 67762900 , char ** argv).\n+ 0x003ede98 436f6c6c 65637469 6e672062 61736963 Collecting basic\n+ 0x003edea8 2053414d 20696e66 6f206672 6f6d204d SAM info from M\n+ 0x003edeb8 41462066 696c6500 0a0a6361 6e206f6e AF file...can on\n+ 0x003edec8 6c792063 6f6e7665 7274204d 41462074 ly convert MAF t\n+ 0x003eded8 6f205341 4d20666f 72207468 65207469 o SAM for the ti\n+ 0x003edee8 6d652062 65696e67 2c20736f 7272790a me being, sorry.\n+ 0x003edef8 00000000 75736520 2d710000 466f7220 ....use -q..For \n+ 0x003edf08 736f7274 696e6720 74686520 72656164 sorting the read\n+ 0x003edf18 73206279 206e616d 652c206d 6f726520 s by name, more \n+ 0x003edf28 52414d20 77696c6c 20626520 75736564 RAM will be used\n+ 0x003edf38 20617320 74686520 66756c6c 2066696c as the full fil\n+ 0x003edf48 65206e65 65647320 746f206c 6f616420 e needs to load \n+ 0x003edf58 696e746f 206d656d 6f72792e 0a000000 into memory.....\n+ 0x003edf68 466f7220 67756573 73696e67 20746865 For guessing the\n+ 0x003edf78 20464153 5451206f 66667365 742c206d FASTQ offset, m\n+ 0x003edf88 6f726520 52414d20 77696c6c 20626520 ore RAM will be \n+ 0x003edf98 75736564 20617320 74686520 66756c6c used as the full\n+ 0x003edfa8 2066696c 65206e65 65647320 746f206c file needs to l\n+ 0x003edfb8 6f616420 696e746f 206d656d 6f72792e oad into memory.\n+ 0x003edfc8 0a000000 20646f6e 652e0a00 57726974 .... done...Writ\n+ 0x003edfd8 74656e20 00000000 20626173 65732e00 ten .... bases..\n+ 0x003edfe8 0a446174 6120636f 6e766572 73696f6e .Data conversion\n+ 0x003edff8 2070726f 63657373 2066696e 69736865 process finishe\n+ 0x003ee008 642c206e 6f206f62 76696f75 73206572 d, no obvious er\n+ 0x003ee018 726f7273 20656e63 6f756e74 65726564 rors encountered\n+ 0x003ee028 2e0a0000 0a4e4f54 49434521 20596f75 .....NOTICE! You\n+ 0x003ee038 20636f6e 76657274 65642064 61746120 converted data \n+ 0x003ee048 77686963 68206861 7320636c 69707069 which has clippi\n+ 0x003ee058 6e672069 6e666f72 6d617469 6f6e2028 ng information (\n+ 0x003ee068 43414620 6f72204d 41462920 696e746f CAF or MAF) into\n+ 0x003ee078 20612066 6f726d61 74207768 69636820 a format which \n+ 0x003ee088 646f6573 206e6f74 20636f6e 7461696e does not contain\n+ 0x003ee098 20636c69 7070696e 6720696e 666f726d clipping inform\n+ 0x003ee0a8 6174696f 6e2e2041 7320796f 75206469 ation. As you di\n+ 0x003ee0b8 64206e6f 74207573 65207468 6520272d d not use the '-\n+ 0x003ee0c8 4327206f 7074696f 6e202870 6572666f C' option (perfo\n+ 0x003ee0d8 726d2068 61726420 636c6970 292c2079 rm hard clip), y\n+ 0x003ee0e8 6f757220 72657375 6c742066 696c6573 our result files\n+ 0x003ee0f8 20646f20 636f6e74 61696e20 74686520 do contain the \n+ 0x003ee108 636f6d70 6c657465 20736571 75656e63 complete sequenc\n+ 0x003ee118 65732069 6e636c75 64696e67 20636c69 es including cli\n+ 0x003ee128 70706564 20706172 74732e20 54686520 pped parts. The \n+ 0x003ee138 636c6970 70656420 70617274 73206f66 clipped parts of\n+ 0x003ee148 20726561 64732068 61766520 6265656e reads have been\n+ 0x003ee158 20736574 20746f20 6c6f7765 72206361 set to lower ca\n+ 0x003ee168 73652c20 74686520 756e636c 69707065 se, the unclippe\n+ 0x003ee178 64207061 72747320 68617665 20757070 d parts have upp\n+ 0x003ee188 65722063 6173652e 0a496620 796f7520 er case..If you \n+ 0x003ee198 646f206e 6f742077 616e7420 746f2068 do not want to h\n+ 0x003ee1a8 61766520 74686520 73657175 656e6365 ave the sequence\n+ 0x003ee1b8 20636173 65206368 616e6765 642c2075 case changed, u\n+ 0x003ee1c8 73652027 2d41272e 20496620 796f7520 se '-A'. If you \n+ 0x003ee1d8 77616e74 20746865 20736571 75656e63 want the sequenc\n+ 0x003ee1e8 65207472 696d6d65 6420696e 73746561 e trimmed instea\n+ 0x003ee1f8 64206f66 20612063 61736520 6368616e d of a case chan\n+ 0x003ee208 67652c20 75736520 272d4327 2e0a0000 ge, use '-C'....\n+ 0x003ee218 0a574152 4e494e47 2120596f 7520636f .WARNING! You co\n+ 0x003ee228 6e766572 74656420 64617461 20776869 nverted data whi\n+ 0x003ee238 63682068 61732063 6c697070 696e6720 ch has clipping \n+ 0x003ee248 696e666f 726d6174 696f6e20 28434146 information (CAF\n+ 0x003ee258 206f7220 4d414629 20696e74 6f206120 or MAF) into a \n+ 0x003ee268 666f726d 61742077 68696368 20646f65 format which doe\n+ 0x003ee278 73206e6f 7420636f 6e746169 6e20636c s not contain cl\n+ 0x003ee288 69707069 6e672069 6e666f72 6d617469 ipping informati\n+ 0x003ee298 6f6e2e20 41732079 6f752064 6964206e on. As you did n\n+ 0x003ee2a8 6f742075 73652074 68652027 2d432720 ot use the '-C' \n+ 0x003ee2b8 6f707469 6f6e2028 70657266 6f726d20 option (perform \n+ 0x003ee2c8 68617264 20636c69 70292c20 796f7572 hard clip), your\n+ 0x003ee2d8 20726573 756c7420 66696c65 7320646f result files do\n+ 0x003ee2e8 20636f6e 7461696e 20746865 20636f6d contain the com\n+ 0x003ee2f8 706c6574 65207365 7175656e 63657320 plete sequences \n+ 0x003ee308 696e636c 7564696e 6720636c 69707065 including clippe\n+ 0x003ee318 64207061 7274732e 20467572 74686572 d parts. Further\n+ 0x003ee328 6d6f7265 2c20796f 75207573 65642027 more, you used '\n+ 0x003ee338 2d412720 746f2073 77697463 68206f66 -A' to switch of\n+ 0x003ee348 66206164 61707469 6e672063 61736520 f adapting case \n+ 0x003ee358 666f7220 64656e6f 74696e67 20636c69 for denoting cli\n+ 0x003ee368 70706564 20706172 74732069 6e207365 pped parts in se\n+ 0x003ee378 7175656e 6365732e 20496620 796f7520 quences. If you \n+ 0x003ee388 646f206e 6f742077 616e7420 74686973 do not want this\n+ 0x003ee398 2c207573 6520272d 43272e20 4f722064 , use '-C'. Or d\n+ 0x003ee3a8 6f206e6f 74207573 6520272d 41272e0a o not use '-A'..\n+ 0x003ee3b8 00000000 61416243 64466869 6d4d7354 ....aAbCdFhimMsT\n+ 0x003ee3c8 75765a63 3a663a6c 3a6e3a4e 3a6f3a50 uvZc:f:l:n:N:o:P\n+ 0x003ee3d8 3a713a51 3a723a52 3a533a74 3a563a78 :q:Q:r:R:S:t:V:x\n+ 0x003ee3e8 3a583a79 3a593a7a 3a000000 766f6964 :X:y:Y:z:...void\n+ 0x003ee3f8 20526561 64436f6e 7461696e 65723a3a ReadContainer::\n+ 0x003ee408 736f7274 436f6e74 61696e65 72546f4d sortContainerToM\n+ 0x003ee418 49524153 74616e64 61726428 636f6e73 IRAStandard(cons\n+ 0x003ee428 74207374 643a3a76 6563746f 723c7569 t std::vector & sortorde\n+ 0x003ee448 72290000 76656374 6f723a3a 72657365 r)..vector::rese\n+ 0x003ee458 72766500 7568206f 68202e2e 2e203432 rve.uh oh ... 42\n+ 0x003ee468 39343936 37323935 20213d20 73697a65 94967295 != size\n+ 0x003ee478 28290000 52435f70 6f6f6c72 7074725b ()..RC_poolrptr[\n+ 0x003ee488 736f7274 6f726465 725b695d 5d3d3d6e sortorder[i]]==n\n+ 0x003ee498 756c6c70 7472203f 3f3f2044 69642079 ullptr ??? Did y\n+ 0x003ee4a8 6f752073 70656369 66792061 20726561 ou specify a rea\n+ 0x003ee4b8 64207477 69636520 696e2079 6f757220 d twice in your \n+ 0x003ee4c8 696e7075 7420666f 7220736f 7274696e input for sortin\n+ 0x003ee4d8 673f0000 5d200000 506c6561 7365206f g?..] ..Please o\n+ 0x003ee4e8 6e6c7920 75736520 6b2c206d 2c206720 nly use k, m, g \n+ 0x003ee4f8 6173206d 6f646966 69657273 2e0a0000 as modifiers....\n+ 0x003ee508 0a0a6d69 72614d45 4d206865 6c707320 ..miraMEM helps \n+ 0x003ee518 796f7520 746f2065 7374696d 61746520 you to estimate \n+ 0x003ee528 74686520 6d656d6f 7279206e 65656465 the memory neede\n+ 0x003ee538 6420746f 20617373 656d626c 65206120 d to assemble a \n+ 0x003ee548 70726f6a 6563742e 0a506c65 61736520 project..Please \n+ 0x003ee558 616e7377 65722074 68652071 75657374 answer the quest\n+ 0x003ee568 696f6e73 2062656c 6f772e0a 0a446566 ions below...Def\n+ 0x003ee578 61756c74 73206172 65206769 76652069 aults are give i\n+ 0x003ee588 6e207371 75617265 20627261 636b6574 n square bracket\n+ 0x003ee598 7320616e 64206368 6f73656e 20696620 s and chosen if \n+ 0x003ee5a8 796f7520 6a757374 20707265 73732072 you just press r\n+ 0x003ee5b8 65747572 6e2e0a48 696e743a 20796f75 eturn..Hint: you\n+ 0x003ee5c8 2063616e 20616464 206b2f6d 2f67206d can add k/m/g m\n+ 0x003ee5d8 6f646966 69657273 20746f20 796f7572 odifiers to your\n+ 0x003ee5e8 206e756d 62657273 20746f20 73617920 numbers to say \n+ 0x003ee5f8 6b696c6f 2c206d65 6761206f 72206769 kilo, mega or gi\n+ 0x003ee608 67612e0a 0a000000 49732069 74206120 ga......Is it a \n+ 0x003ee618 67656e6f 6d65206f 72207472 616e7363 genome or transc\n+ 0x003ee628 72697074 20284553 542f7461 672f6574 ript (EST/tag/et\n+ 0x003ee638 632e2920 70726f6a 6563743f 00000000 c.) project?....\n+ 0x003ee648 53697a65 206f6620 67656e6f 6d653f00 Size of genome?.\n+ 0x003ee658 41207365 7175656e 63652073 697a6520 A sequence size \n+ 0x003ee668 6f66206c 65737320 7468616e 20313030 of less than 100\n+ 0x003ee678 20626173 65732069 73207072 65747479 bases is pretty\n+ 0x003ee688 20696d70 726f6261 626c652e 0a000000 improbable.....\n+ 0x003ee698 44696420 796f7520 666f7267 65742061 Did you forget a\n+ 0x003ee6a8 206d6f64 69666965 7220286b 2c206d20 modifier (k, m \n+ 0x003ee6b8 6f722067 2920746f 20746865 206e756d or g) to the num\n+ 0x003ee6c8 62657220 796f7520 67617665 3f0a0000 ber you gave?...\n+ 0x003ee6d8 4c6f6f6b 73206c69 6b652061 206c6172 Looks like a lar\n+ 0x003ee6e8 67657220 65756b61 72796f74 652c2067 ger eukaryote, g\n+ 0x003ee6f8 75657373 696e6720 6c617267 65737420 uessing largest \n+ 0x003ee708 6368726f 6d6f736f 6d652073 697a653a chromosome size:\n+ 0x003ee718 2033306d 0a436861 6e676520 6966206e 30m.Change if n\n+ 0x003ee728 65656465 64210a00 53697a65 206f6620 eeded!..Size of \n+ 0x003ee738 6c617267 65737420 6368726f 6d6f736f largest chromoso\n+ 0x003ee748 6d653f00 49732069 74206120 64656e6f me?.Is it a deno\n+ 0x003ee758 766f206f 72206d61 7070696e 67206173 vo or mapping as\n+ 0x003ee768 73656d62 6c793f00 4e756d62 6572206f sembly?.Number o\n+ 0x003ee778 66205361 6e676572 20726561 64733f00 f Sanger reads?.\n+ 0x003ee788 41726520 74686572 65203435 34207265 Are there 454 re\n+ 0x003ee798 6164733f 00000000 4e756d62 6572206f ads?....Number o\n+ 0x003ee7a8 66203435 34204753 32302072 65616473 f 454 GS20 reads\n+ 0x003ee7b8 3f000000 4e756d62 6572206f 66203435 ?...Number of 45\n+ 0x003ee7c8 3420464c 58207265 6164733f 00000000 4 FLX reads?....\n+ 0x003ee7d8 4e756d62 6572206f 66203435 34205469 Number of 454 Ti\n+ 0x003ee7e8 74616e69 756d2072 65616473 3f000000 tanium reads?...\n+ 0x003ee7f8 41726520 74686572 65205061 6342696f Are there PacBio\n+ 0x003ee808 20726561 64733f00 4e756d62 6572206f reads?.Number o\n+ 0x003ee818 66205061 6342696f 20726561 64733f00 f PacBio reads?.\n+ 0x003ee828 41766572 61676520 50616342 696f206c Average PacBio l\n+ 0x003ee838 656e6774 683f0000 41726520 74686572 ength?..Are ther\n+ 0x003ee848 6520536f 6c657861 20726561 64733f00 e Solexa reads?.\n+ 0x003ee858 4e756d62 6572206f 6620536f 6c657861 Number of Solexa\n+ 0x003ee868 20726561 64733f00 41766572 61676520 reads?.Average \n+ 0x003ee878 536f6c65 7865206c 656e6774 683f0000 Solexe length?..\n+ 0x003ee888 0a0a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a2a ..**************\n+ 0x003ee898 2a2a2a2a 2a2a2a2a 2a2a2a20 45737469 *********** Esti\n+ 0x003ee8a8 6d617465 73202a2a 2a2a2a2a 2a2a2a2a mates **********\n+ 0x003ee8b8 2a2a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a0a ***************.\n+ 0x003ee8c8 0a000000 45535420 61737365 6d626c79 ....EST assembly\n+ 0x003ee8d8 2c206361 6e6e6f74 20676976 6520636f , cannot give co\n+ 0x003ee8e8 76657261 67652065 7374696d 6174652e verage estimate.\n+ 0x003ee8f8 20416c73 6f2c2065 7374696d 61746573 Also, estimates\n+ 0x003ee908 0a6d6179 20626520 77617920 6f666620 .may be way off \n+ 0x003ee918 666f7220 70617468 6f6c6f67 6963616c for pathological\n+ 0x003ee928 20636173 65732e0a 00000000 54686520 cases......The \n+ 0x003ee938 636f6e74 69677320 77696c6c 20686176 contigs will hav\n+ 0x003ee948 6520616e 20617665 72616765 20636f76 e an average cov\n+ 0x003ee958 65726167 65206f66 207e2000 20282b2f erage of ~ . (+/\n+ 0x003ee968 2d203130 25290a45 7374696d 61746573 - 10%).Estimates\n+ 0x003ee978 206d6179 20626520 77617920 6f666620 may be way off \n+ 0x003ee988 666f7220 70617468 6f6c6f67 6963616c for pathological\n+ 0x003ee998 20636173 65732e0a 00000000 0a52414d cases.......RAM\n+ 0x003ee9a8 20657374 696d6174 65733a0a 00000000 estimates:.....\n+ 0x003ee9b8 72656164 732b636f 6e746967 73202875 reads+contigs (u\n+ 0x003ee9c8 6e61766f 69646162 6c65293a 20000000 navoidable): ...\n+ 0x003ee9d8 6c617267 65207461 626c6573 20287475 large tables (tu\n+ 0x003ee9e8 6e61626c 65293a20 00000000 746f7461 nable): ....tota\n+ 0x003ee9f8 6c202870 65616b29 3a200000 61646420 l (peak): ..add \n+ 0x003eea08 69662075 73696e67 202d434c 3a70766c if using -CL:pvl\n+ 0x003eea18 633d7965 73203a20 00000000 61646420 c=yes : ....add \n+ 0x003eea28 69662073 65747469 6e67202d 434f3a6d if setting -CO:m\n+ 0x003eea38 73723d6e 6f203a20 00000000 0a0a4e6f sr=no : ......No\n+ 0x003eea48 74652074 68617420 736f6d65 20616c67 te that some alg\n+ 0x003eea58 6f726974 686d7320 6d696768 74207472 orithms might tr\n+ 0x003eea68 7920746f 20677261 62206d6f 7265206d y to grab more m\n+ 0x003eea78 656d6f72 79206966 0a746865 206e6565 emory if.the nee\n+ 0x003eea88 64206172 69736573 20616e64 20746865 d arises and the\n+ 0x003eea98 20737973 74656d20 68617320 656e6f75 system has enou\n+ 0x003eeaa8 67682052 414d2e20 54686520 6f707469 gh RAM. The opti\n+ 0x003eeab8 6f6e730a 666f7220 6175746f 6d617469 ons.for automati\n+ 0x003eeac8 63206d65 6d6f7279 206d616e 6167656d c memory managem\n+ 0x003eead8 656e7420 636f6e74 726f6c20 74686973 ent control this\n+ 0x003eeae8 3a0a2020 2d41533a 616d6d2c 202d4153 :. -AS:amm, -AS\n+ 0x003eeaf8 3a6b706d 662c202d 41533a6d 70730a46 :kpmf, -AS:mps.F\n+ 0x003eeb08 75727468 65722073 77697463 68657320 urther switches \n+ 0x003eeb18 74686174 206d6967 68742072 65647563 that might reduc\n+ 0x003eeb28 65205241 4d202861 7420636f 7374206f e RAM (at cost o\n+ 0x003eeb38 66207275 6e207469 6d650a6f 72206163 f run time.or ac\n+ 0x003eeb48 63757261 6379293a 0a20202d 534b3a6d curacy):. -SK:m\n+ 0x003eeb58 68696d2c 202d534b 3a6d6368 72202862 him, -SK:mchr (b\n+ 0x003eeb68 6f746820 72756e74 696d6529 3b202d53 oth runtime); -S\n+ 0x003eeb78 4b3a6d68 70722028 61636375 72616379 K:mhpr (accuracy\n+ 0x003eeb88 290a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a2a ).**************\n 0x003eeb98 2a2a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a2a ****************\n 0x003eeba8 2a2a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a2a ****************\n- 0x003eebb8 2a2a2a0a 00000000 546f2028 756e2d29 ***.....To (un-)\n- 0x003eebc8 73756273 63726962 65207468 65204d49 subscribe the MI\n- 0x003eebd8 5241206d 61696c69 6e67206c 69737473 RA mailing lists\n- 0x003eebe8 2c207365 653a0a09 68747470 3a2f2f77 , see:..http://w\n- 0x003eebf8 77772e63 68657672 6575782e 6f72672f ww.chevreux.org/\n- 0x003eec08 6d697261 5f6d6169 6c696e67 6c697374 mira_mailinglist\n- 0x003eec18 732e6874 6d6c0a0a 41667465 72207375 s.html..After su\n- 0x003eec28 62736372 6962696e 672c206d 61696c20 bscribing, mail \n- 0x003eec38 67656e65 72616c20 71756573 74696f6e general question\n- 0x003eec48 7320746f 20746865 204d4952 41207461 s to the MIRA ta\n- 0x003eec58 6c6b206d 61696c69 6e67206c 6973743a lk mailing list:\n- 0x003eec68 0a096d69 72615f74 616c6b40 66726565 ..mira_talk@free\n- 0x003eec78 6c697374 732e6f72 670a0a0a 546f2072 lists.org...To r\n- 0x003eec88 65706f72 74206275 6773206f 72206173 eport bugs or as\n- 0x003eec98 6b20666f 72206665 61747572 65732c20 k for features, \n- 0x003eeca8 706c6561 73652075 73652074 68652053 please use the S\n- 0x003eecb8 6f757263 65466f72 67652074 69636b65 ourceForge ticke\n- 0x003eecc8 74696e67 0a737973 74656d20 61743a0a ting.system at:.\n- 0x003eecd8 09687474 703a2f2f 736f7572 6365666f .http://sourcefo\n- 0x003eece8 7267652e 6e65742f 702f6d69 72612d61 rge.net/p/mira-a\n- 0x003eecf8 7373656d 626c6572 2f746963 6b657473 ssembler/tickets\n- 0x003eed08 2f0a5468 69732065 6e737572 65732074 /.This ensures t\n- 0x003eed18 68617420 72657175 65737473 20646f20 hat requests do \n- 0x003eed28 6e6f7420 67657420 6c6f7374 2e0a0a0a not get lost....\n- 0x003eed38 00000000 436f6d70 696c6564 20696e20 ....Compiled in \n- 0x003eed48 626f756e 64747261 636b696e 67206d6f boundtracking mo\n- 0x003eed58 64652e0a 00000000 436f6d70 696c6564 de......Compiled\n- 0x003eed68 20696e20 62756774 7261636b 696e6720 in bugtracking \n- 0x003eed78 6d6f6465 2e0a0000 436f6d70 696c6564 mode....Compiled\n- 0x003eed88 20776974 6820454e 41424c45 36342064 with ENABLE64 d\n- 0x003eed98 652d6163 74697661 7465642e 0a000000 e-activated.....\n- 0x003eeda8 52756e74 696d6520 73657474 696e6773 Runtime settings\n- 0x003eedb8 2028736f 7272792c 20666f72 20646562 (sorry, for deb\n- 0x003eedc8 7567293a 00000000 0a095369 7a65206f ug):......Size o\n- 0x003eedd8 66207369 7a655f74 20203a20 00000000 f size_t : ....\n- 0x003eede8 0a095369 7a65206f 66207569 6e743332 ..Size of uint32\n- 0x003eedf8 20203a20 00000000 0a095369 7a65206f : ......Size o\n- 0x003eee08 66207569 6e743332 5f743a20 00000000 f uint32_t: ....\n- 0x003eee18 0a095369 7a65206f 66207569 6e743634 ..Size of uint64\n- 0x003eee28 20203a20 00000000 0a095369 7a65206f : ......Size o\n- 0x003eee38 66207569 6e743634 5f743a20 00000000 f uint64_t: ....\n- 0x003eee48 0a437572 72656e74 20737973 74656d3a .Current system:\n- 0x003eee58 20000000 756e616d 65202d61 00000000 ...uname -a....\n- 0x003eee68 46696c65 206e6f74 20666f75 6e643a20 File not found: \n- 0x003eee78 00000000 766f6964 206d616b 6553656c ....void makeSel\n- 0x003eee88 65637469 6f6e5374 72696e67 53657428 ectionStringSet(\n- 0x003eee98 7374643a 3a737472 696e6720 26206669 std::string & fi\n- 0x003eeea8 6c656e61 6d652900 65686868 3f000000 lename).ehhh?...\n- 0x003eeeb8 206d6863 3d000000 2065636e 3d000000 mhc=... ecn=...\n- 0x003eeec8 206c656e 3d000000 53455154 4f484153 len=...SEQTOHAS\n- 0x003eeed8 485f4c4f 4f505354 41525420 62617365 H_LOOPSTART base\n- 0x003eeee8 73706572 68617368 20000000 203e2061 sperhash ... > a\n- 0x003eeef8 6c6c6f77 65642073 697a6520 666f7220 llowed size for \n- 0x003eef08 56484153 4854203f 00000000 496c6c65 VHASHT ?....Ille\n- 0x003eef18 67616c20 62617365 20270000 27202841 gal base '..' (A\n- 0x003eef28 53434949 20000000 29206174 20706f73 SCII ...) at pos\n- 0x003eef38 6974696f 6e200000 20696e20 73657175 ition .. in sequ\n- 0x003eef48 656e6365 20000000 286e6f20 6e616d65 ence ...(no name\n- 0x003eef58 20676976 656e2900 506f7075 6c617469 given).Populati\n- 0x003eef68 6e672048 534e3a00 205b0000 255d2000 ng HSN:. [..%] .\n- 0x003eef78 4f6f6f70 733f2000 20637572 72656e74 Ooops? . current\n- 0x003eef88 693c3020 7c7c2063 75727265 6e74693e i<0 || currenti>\n- 0x003eef98 3d204853 5f687376 5f686173 68737461 = HS_hsv_hashsta\n- 0x003eefa8 74732e73 697a6528 29203f3f 3f000000 ts.size() ???...\n- 0x003eefb8 206e6578 74666f75 6e64693c 30207c7c nextfoundi<0 ||\n- 0x003eefc8 206e6578 74666f75 6e64693e 3d204853 nextfoundi>= HS\n- 0x003eefd8 5f687376 5f686173 68737461 74732e73 _hsv_hashstats.s\n- 0x003eefe8 697a6528 29203f3f 3f000000 4d656469 ize() ???...Medi\n- 0x003eeff8 616e203e 3d200000 64657175 653a3a5f an >= ..deque::_\n- 0x003ef008 4d5f6e65 775f656c 656d656e 74735f61 M_new_elements_a\n- 0x003ef018 745f6261 636b0000 436f6c6c 65637469 t_back..Collecti\n- 0x003ef028 6e672044 42472073 74617473 3a000000 ng DBG stats:...\n- 0x003ef038 31292072 65766873 7074723d 3d6e756c 1) revhsptr==nul\n- 0x003ef048 6c707472 203f3f3f 20666f72 20000000 lptr ??? for ...\n- 0x003ef058 20766572 73757320 00000000 32292072 versus ....2) r\n- 0x003ef068 65766873 7074723d 3d6e756c 6c707472 evhsptr==nullptr\n- 0x003ef078 203f3f3f 00000000 74616b65 6e5b6163 ???....taken[ac\n- 0x003ef088 74695d21 3d74616b 656e5b72 65766873 ti]!=taken[revhs\n- 0x003ef098 695d203f 3f3f0000 61737370 74722d3e i] ???..assptr->\n- 0x003ef0a8 656d7074 79282920 3f3f3f00 656e6420 empty() ???.end \n- 0x003ef0b8 63686563 6b207275 6e766973 6974206e check runvisit n\n- 0x003ef0c8 6f742063 6f6d706c 6574656c 7920656d ot completely em\n- 0x003ef0d8 7074793f 3f3f0000 53746172 74696e67 pty???..Starting\n- 0x003ef0e8 20707269 765f7364 62675f70 6f70756c priv_sdbg_popul\n- 0x003ef0f8 61746548 61736853 7461744e 6f646573 ateHashStatNodes\n- 0x003ef108 00000000 53746172 74696e67 20707269 ....Starting pri\n- 0x003ef118 765f7364 62675f61 73736967 6e477261 v_sdbg_assignGra\n- 0x003ef128 70684944 734d616b 65536571 73416e64 phIDsMakeSeqsAnd\n- 0x003ef138 436f6c6c 65637453 74617473 00000000 CollectStats....\n- 0x003ef148 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003ef158 6963733c 54564841 53485f54 3e3a3a63 ics::c\n- 0x003ef168 6865636b 53657175 656e6365 466f7253 heckSequenceForS\n- 0x003ef178 44424743 68696d65 72617328 29000000 DBGChimeras()...\n- 0x003ef188 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003ef198 6963733c 54564841 53485f54 3e3a3a70 ics::p\n- 0x003ef1a8 726f706f 73655344 42474564 69747328 roposeSDBGEdits(\n- 0x003ef1b8 29000000 766f6964 20486173 68537461 )...void HashSta\n- 0x003ef1c8 74697374 6963733c 54564841 53485f54 tistics::priv_sdbg_ass\n- 0x003ef1e8 69676e47 72617068 4944734d 616b6553 ignGraphIDsMakeS\n- 0x003ef1f8 65717341 6e64436f 6c6c6563 74537461 eqsAndCollectSta\n- 0x003ef208 74730000 766f6964 20486173 68537461 ts..void HashSta\n- 0x003ef218 74697374 6963733c 54564841 53485f54 tistics::priv_sdbg_pop\n- 0x003ef238 756c6174 65486173 68537461 744e6f64 ulateHashStatNod\n- 0x003ef248 65732829 00000000 ffbf7f3f efaf6f2f es().......?..o/\n- 0x003ef258 df9f5f1f cf8f4f0f fbbb7b3b ebab6b2b .._...O...{;..k+\n- 0x003ef268 db9b5b1b cb8b4b0b f7b77737 e7a76727 ..[...K...w7..g'\n- 0x003ef278 d7975717 c7874707 f3b37333 e3a36323 ..W...G...s3..c#\n- 0x003ef288 d3935313 c3834303 febe7e3e eeae6e2e ..S...C...~>..n.\n- 0x003ef298 de9e5e1e ce8e4e0e faba7a3a eaaa6a2a ..^...N...z:..j*\n- 0x003ef2a8 da9a5a1a ca8a4a0a f6b67636 e6a66626 ..Z...J...v6..f&\n- 0x003ef2b8 d6965616 c6864606 f2b27232 e2a26222 ..V...F...r2..b\"\n- 0x003ef2c8 d2925212 c2824202 fdbd7d3d edad6d2d ..R...B...}=..m-\n- 0x003ef2d8 dd9d5d1d cd8d4d0d f9b97939 e9a96929 ..]...M...y9..i)\n- 0x003ef2e8 d9995919 c9894909 f5b57535 e5a56525 ..Y...I...u5..e%\n- 0x003ef2f8 d5955515 c5854505 f1b17131 e1a16121 ..U...E...q1..a!\n- 0x003ef308 d1915111 c1814101 fcbc7c3c ecac6c2c ..Q...A...|<..l,\n- 0x003ef318 dc9c5c1c cc8c4c0c f8b87838 e8a86828 ..\\...L...x8..h(\n- 0x003ef328 d8985818 c8884808 f4b47434 e4a46424 ..X...H...t4..d$\n- 0x003ef338 d4945414 c4844404 f0b07030 e0a06020 ..T...D...p0..` \n- 0x003ef348 d0905010 c0804000 88130000 d0070000 ..P...@.........\n- 0x003ef358 e8030000 f4010000 c8000000 64000000 ............d...\n- 0x003ef368 626f6f73 743a3a66 6f726d61 745f6572 boost::format_er\n- 0x003ef378 726f723a 20666f72 6d617420 67656e65 ror: format gene\n- 0x003ef388 72696320 6661696c 75726500 626f6f73 ric failure.boos\n- 0x003ef398 743a3a62 61645f66 6f726d61 745f7374 t::bad_format_st\n- 0x003ef3a8 72696e67 3a20666f 726d6174 2d737472 ring: format-str\n- 0x003ef3b8 696e6720 69732069 6c6c2d66 6f726d65 ing is ill-forme\n- 0x003ef3c8 64000000 626f6f73 743a3a74 6f6f5f66 d...boost::too_f\n- 0x003ef3d8 65775f61 7267733a 20666f72 6d61742d ew_args: format-\n- 0x003ef3e8 73747269 6e672072 65666572 72656420 string referred \n- 0x003ef3f8 746f206d 6f726520 61726775 6d656e74 to more argument\n- 0x003ef408 73207468 616e2077 65726520 70617373 s than were pass\n- 0x003ef418 65640000 626f6f73 743a3a74 6f6f5f6d ed..boost::too_m\n- 0x003ef428 616e795f 61726773 3a20666f 726d6174 any_args: format\n- 0x003ef438 2d737472 696e6720 72656665 72726564 -string referred\n- 0x003ef448 20746f20 66657765 72206172 67756d65 to fewer argume\n- 0x003ef458 6e747320 7468616e 20776572 65207061 nts than were pa\n- 0x003ef468 73736564 00000000 626f6f73 743a3a69 ssed....boost::i\n- 0x003ef478 6f3a3a62 61736963 5f616c74 73747269 o::basic_altstri\n- 0x003ef488 6e676275 663c4368 2c205472 2c20416c ngbuf::pos_type b\n- 0x003ef4a8 6f6f7374 3a3a696f 3a3a6261 7369635f oost::io::basic_\n- 0x003ef4b8 616c7473 7472696e 67627566 3c43682c altstringbuf::see\n- 0x003ef4d8 6b706f73 28626f6f 73743a3a 696f3a3a kpos(boost::io::\n- 0x003ef4e8 62617369 635f616c 74737472 696e6762 basic_altstringb\n- 0x003ef4f8 75663c43 682c2054 722c2041 6c6c6f63 uf::pos_type, std\n- 0x003ef518 3a3a696f 735f6261 73653a3a 6f70656e ::ios_base::open\n- 0x003ef528 6d6f6465 29205b77 69746820 4368203d mode) [with Ch =\n- 0x003ef538 20636861 723b2054 72203d20 7374643a char; Tr = std:\n- 0x003ef548 3a636861 725f7472 61697473 3c636861 :char_traits; Alloc = std:\n- 0x003ef568 3a616c6c 6f636174 6f723c63 6861723e :allocator\n- 0x003ef578 3b20626f 6f73743a 3a696f3a 3a626173 ; boost::io::bas\n- 0x003ef588 69635f61 6c747374 72696e67 6275663c ic_altstringbuf<\n- 0x003ef598 43682c20 54722c20 416c6c6f 633e3a3a Ch, Tr, Alloc>::\n- 0x003ef5a8 706f735f 74797065 203d2073 74643a3a pos_type = std::\n- 0x003ef5b8 66706f73 3c5f5f6d 62737461 74655f74 fpos<__mbstate_t\n- 0x003ef5c8 3e3b2073 74643a3a 696f735f 62617365 >; std::ios_base\n- 0x003ef5d8 3a3a6f70 656e6d6f 6465203d 20737464 ::openmode = std\n- 0x003ef5e8 3a3a696f 735f6261 73653a3a 6f70656e ::ios_base::open\n- 0x003ef5f8 6d6f6465 5d000000 2f757372 2f696e63 mode].../usr/inc\n- 0x003ef608 6c756465 2f626f6f 73742f66 6f726d61 lude/boost/forma\n- 0x003ef618 742f616c 745f7373 74726561 6d5f696d t/alt_sstream_im\n- 0x003ef628 706c2e68 70700000 766f6964 20626f6f pl.hpp..void boo\n- 0x003ef638 73743a3a 64657461 696c3a3a 696e7465 st::detail::inte\n- 0x003ef648 72727570 74696f6e 5f636865 636b6572 rruption_checker\n- 0x003ef658 3a3a756e 6c6f636b 5f69665f 6c6f636b ::unlock_if_lock\n- 0x003ef668 65642829 00000000 21706f73 69783a3a ed()....!posix::\n- 0x003ef678 70746872 6561645f 6d757465 785f756e pthread_mutex_un\n- 0x003ef688 6c6f636b 286d2900 626f6f73 743a3a62 lock(m).boost::b\n- 0x003ef698 61736963 5f666f72 6d61743c 43682c20 asic_format& boos\n- 0x003ef6b8 743a3a62 61736963 5f666f72 6d61743c t::basic_format<\n- 0x003ef6c8 43682c20 54722c20 416c6c6f 633e3a3a Ch, Tr, Alloc>::\n- 0x003ef6d8 636c6561 72282920 5b776974 68204368 clear() [with Ch\n- 0x003ef6e8 203d2063 6861723b 20547220 3d207374 = char; Tr = st\n- 0x003ef6f8 643a3a63 6861725f 74726169 74733c63 d::char_traits; Alloc = st\n- 0x003ef718 643a3a61 6c6c6f63 61746f72 3c636861 d::allocator].bound_.size(\n- 0x003ef738 293d3d30 207c7c20 6e756d5f 61726773 )==0 || num_args\n- 0x003ef748 5f203d3d 20737461 7469635f 63617374 _ == static_cast\n- 0x003ef758 3c696e74 3e28626f 756e645f 2e73697a (bound_.siz\n- 0x003ef768 65282929 00000000 626f6f73 743a3a62 e())....boost::b\n- 0x003ef778 61736963 5f666f72 6d61743c 43682c20 asic_format& boos\n- 0x003ef798 743a3a62 61736963 5f666f72 6d61743c t::basic_format<\n- 0x003ef7a8 43682c20 54722c20 416c6c6f 633e3a3a Ch, Tr, Alloc>::\n- 0x003ef7b8 70617273 6528636f 6e737420 73747269 parse(const stri\n- 0x003ef7c8 6e675f74 79706526 29205b77 69746820 ng_type&) [with \n- 0x003ef7d8 4368203d 20636861 723b2054 72203d20 Ch = char; Tr = \n- 0x003ef7e8 7374643a 3a636861 725f7472 61697473 std::char_traits\n- 0x003ef7f8 3c636861 723e3b20 416c6c6f 63203d20 ; Alloc = \n- 0x003ef808 7374643a 3a616c6c 6f636174 6f723c63 std::allocator; boost::bas\n- 0x003ef828 69635f66 6f726d61 743c4368 2c205472 ic_format::string\n- 0x003ef848 5f747970 65203d20 7374643a 3a5f5f63 _type = std::__c\n- 0x003ef858 78783131 3a3a6261 7369635f 73747269 xx11::basic_stri\n- 0x003ef868 6e673c63 6861723e 5d000000 2f757372 ng].../usr\n- 0x003ef878 2f696e63 6c756465 2f626f6f 73742f66 /include/boost/f\n- 0x003ef888 6f726d61 742f7061 7273696e 672e6870 ormat/parsing.hp\n- 0x003ef898 70000000 73746174 69635f63 6173743c p...static_cast<\n- 0x003ef8a8 756e7369 676e6564 20696e74 3e286375 unsigned int>(cu\n- 0x003ef8b8 725f6974 656d2920 3c206974 656d735f r_item) < items_\n- 0x003ef8c8 2e73697a 65282920 7c7c2063 75725f69 .size() || cur_i\n- 0x003ef8d8 74656d3d 3d300000 766f6964 20626f6f tem==0..void boo\n- 0x003ef8e8 73743a3a 696f3a3a 64657461 696c3a3a st::io::detail::\n- 0x003ef8f8 666f726d 61745f69 74656d3c 43682c20 format_item::comp\n- 0x003ef918 7574655f 73746174 65732829 205b7769 ute_states() [wi\n- 0x003ef928 74682043 68203d20 63686172 3b205472 th Ch = char; Tr\n- 0x003ef938 203d2073 74643a3a 63686172 5f747261 = std::char_tra\n- 0x003ef948 6974733c 63686172 3e3b2041 6c6c6f63 its; Alloc\n- 0x003ef958 203d2073 74643a3a 616c6c6f 6361746f = std::allocato\n- 0x003ef968 723c6368 61723e5d 00000000 2f757372 r]..../usr\n- 0x003ef978 2f696e63 6c756465 2f626f6f 73742f66 /include/boost/f\n- 0x003ef988 6f726d61 742f696e 7465726e 616c732e ormat/internals.\n- 0x003ef998 68707000 2128666d 74737461 74655f2e hpp.!(fmtstate_.\n- 0x003ef9a8 666c6167 735f2026 28737464 3a3a696f flags_ &(std::io\n- 0x003ef9b8 735f6261 73653a3a 61646a75 73746669 s_base::adjustfi\n- 0x003ef9c8 656c6420 5e737464 3a3a696f 735f6261 eld ^std::ios_ba\n- 0x003ef9d8 73653a3a 6c656674 29290000 766f6964 se::left))..void\n- 0x003ef9e8 20486173 68537461 74697374 6963733c HashStatistics<\n- 0x003ef9f8 54564841 53485f54 3e3a3a69 6e414e6f TVHASH_T>::inANo\n- 0x003efa08 74422848 61736853 74617469 73746963 tB(HashStatistic\n- 0x003efa18 73202620 6873612c 20486173 68537461 s & hsa, HashSta\n- 0x003efa28 74697374 69637320 26206873 62290000 tistics & hsb)..\n- 0x003efa38 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003efa48 6963733c 54564841 53485f54 3e3a3a69 ics::i\n- 0x003efa58 6e41416e 64422848 61736853 74617469 nAAndB(HashStati\n- 0x003efa68 73746963 73202620 6873612c 20486173 stics & hsa, Has\n- 0x003efa78 68537461 74697374 69637320 26206873 hStatistics & hs\n- 0x003efa88 62290000 766f6964 20486173 68537461 b)..void HashSta\n- 0x003efa98 74697374 6963733c 54564841 53485f54 tistics::estimDigiNorm\n- 0x003efab8 436f7628 52656164 20262061 63747265 Cov(Read & actre\n- 0x003efac8 61642900 636f6e73 74207479 70656e61 ad).const typena\n- 0x003efad8 6d652048 61736853 74617469 73746963 me HashStatistic\n- 0x003efae8 733c5456 48415348 5f543e3a 3a686173 s::has\n- 0x003efaf8 68737461 745f7420 2a204861 73685374 hstat_t * HashSt\n- 0x003efb08 61746973 74696373 3c545648 4153485f atistics::findVHash(co\n- 0x003efb28 6e737420 68617368 73746174 5f742026 nst hashstat_t &\n- 0x003efb38 20736561 72636876 616c2900 62616974 searchval).bait\n- 0x003efb48 68697432 00000000 766f6964 20486173 hit2....void Has\n- 0x003efb58 68537461 74697374 6963733c 54564841 hStatistics::saveHashS\n- 0x003efb78 74617469 73746963 7328636f 6e737420 tatistics(const \n- 0x003efb88 7374643a 3a737472 696e6720 26206669 std::string & fi\n- 0x003efb98 6c656e61 6d650000 766f6964 20486173 lename..void Has\n- 0x003efba8 68537461 74697374 6963733c 54564841 hStatistics::loadHashS\n- 0x003efbc8 74617469 73746963 7328636f 6e737420 tatistics(const \n- 0x003efbd8 6d687368 65616465 725f7420 26206d68 mhsheader_t & mh\n- 0x003efbe8 73682c20 677a4669 6c652026 20677a66 sh, gzFile & gzf\n- 0x003efbf8 29000000 626f6f6c 20486173 68537461 )...bool HashSta\n- 0x003efc08 74697374 6963733c 54564841 53485f54 tistics::loadHashStati\n- 0x003efc28 73746963 7346696c 65486561 64657228 sticsFileHeader(\n- 0x003efc38 677a4669 6c652026 20677a66 29000000 gzFile & gzf)...\n- 0x003efc48 636f6e73 74207479 70656e61 6d652048 const typename H\n- 0x003efc58 61736853 74617469 73746963 733c5456 ashStatistics::mhshead\n- 0x003efc78 65725f74 20486173 68537461 74697374 er_t HashStatist\n- 0x003efc88 6963733c 54564841 53485f54 3e3a3a6c ics::l\n- 0x003efc98 6f616448 61736853 74617469 73746963 oadHashStatistic\n- 0x003efca8 7346696c 65486561 64657228 636f6e73 sFileHeader(cons\n- 0x003efcb8 74207374 643a3a73 7472696e 67202620 t std::string & \n- 0x003efcc8 666e2900 766f6964 20486173 68537461 fn).void HashSta\n- 0x003efcd8 74697374 6963733c 54564841 53485f54 tistics::loadHashStati\n- 0x003efcf8 73746963 7328636f 6e737420 7374643a stics(const std:\n- 0x003efd08 3a737472 696e6720 26206669 6c656e61 :string & filena\n- 0x003efd18 6d652900 766f6964 20486173 68537461 me).void HashSta\n- 0x003efd28 74697374 6963733c 54564841 53485f54 tistics::assignReadBas\n- 0x003efd48 65537461 74697374 6963735f 4d756c74 eStatistics_Mult\n- 0x003efd58 69546872 65616428 52656164 506f6f6c iThread(ReadPool\n- 0x003efd68 20262072 702c2075 696e7433 32206e75 & rp, uint32 nu\n- 0x003efd78 6d746872 65616473 2c20626f 6f6c206d mthreads, bool m\n- 0x003efd88 61736b6e 61737479 72657065 6174732c asknastyrepeats,\n- 0x003efd98 2075696e 74333220 6d696e63 6f756e74 uint32 mincount\n- 0x003efda8 6b6d6572 666f726b 732c2062 6f6f6c20 kmerforks, bool \n- 0x003efdb8 6e656564 66776472 65762900 766f6964 needfwdrev).void\n- 0x003efdc8 20486173 68537461 74697374 6963733c HashStatistics<\n- 0x003efdd8 54564841 53485f54 3e3a3a70 72657061 TVHASH_T>::prepa\n- 0x003efde8 72655374 7265616d 4164644e 65787453 reStreamAddNextS\n- 0x003efdf8 65717565 6e636528 636f6e73 7420766f equence(const vo\n- 0x003efe08 6964202a 20736571 766f6964 2c207569 id * seqvoid, ui\n- 0x003efe18 6e743634 20736c65 6e2c2063 6f6e7374 nt64 slen, const\n- 0x003efe28 20636861 72202a20 6e616d65 7374722c char * namestr,\n- 0x003efe38 2075696e 74382073 65717479 70652c20 uint8 seqtype, \n- 0x003efe48 626f6f6c 20697372 65766572 73650000 bool isreverse..\n- 0x003efe58 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003efe68 6963733c 54564841 53485f54 3e3a3a70 ics::p\n- 0x003efe78 72657061 72655374 7265616d 48617368 repareStreamHash\n- 0x003efe88 53746174 69737469 63732875 696e7433 Statistics(uint3\n- 0x003efe98 32206261 73657370 65726861 73682c20 2 basesperhash, \n- 0x003efea8 696e7433 32206d65 6d746f75 73652c20 int32 memtouse, \n- 0x003efeb8 636f6e73 74207374 643a3a73 7472696e const std::strin\n- 0x003efec8 67202620 68617368 73746174 66696c65 g & hashstatfile\n- 0x003efed8 6e616d65 2c20636f 6e737420 7374643a name, const std:\n- 0x003efee8 3a737472 696e6720 2620746d 70646972 :string & tmpdir\n- 0x003efef8 6563746f 72792900 75696e74 36342048 ectory).uint64 H\n- 0x003eff08 61736853 74617469 73746963 733c5456 ashStatistics::compute\n- 0x003eff28 48617368 53746174 69737469 63732863 HashStatistics(c\n- 0x003eff38 6f6e7374 20737464 3a3a6c69 73743c73 onst std::list & se\n- 0x003eff58 7166696c 65732c20 696e7433 32206d65 qfiles, int32 me\n- 0x003eff68 6d746f75 73652c20 626f6f6c 20667764 mtouse, bool fwd\n- 0x003eff78 616e6472 65762c20 75696e74 33322066 andrev, uint32 f\n- 0x003eff88 77647265 766d696e 2c207569 6e743332 wdrevmin, uint32\n- 0x003eff98 20726172 656b6d65 72656172 6c796b69 rarekmerearlyki\n- 0x003effa8 6c6c2c20 75696e74 33322062 61736573 ll, uint32 bases\n- 0x003effb8 70657268 6173682c 20636f6e 73742073 perhash, const s\n- 0x003effc8 74643a3a 73747269 6e672026 20686173 td::string & has\n- 0x003effd8 68737461 7466696c 656e616d 652c2063 hstatfilename, c\n- 0x003effe8 6f6e7374 20737464 3a3a7374 72696e67 onst std::string\n- 0x003efff8 20262064 69726563 746f7279 29000000 & directory)...\n- 0x003f0008 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003f0018 6963733c 54564841 53485f54 3e3a3a63 ics::c\n- 0x003f0028 6f6d7075 74654861 73685374 61746973 omputeHashStatis\n- 0x003f0038 74696373 28526561 64506f6f 6c202620 tics(ReadPool & \n- 0x003f0048 72702c20 626f6f6c 20636865 636b7573 rp, bool checkus\n- 0x003f0058 6564696e 61737365 6d626c79 2c20626f edinassembly, bo\n- 0x003f0068 6f6c2061 6c736f72 61696c73 2c20626f ol alsorails, bo\n- 0x003f0078 6f6c2066 7764616e 64726576 2c207569 ol fwdandrev, ui\n- 0x003f0088 6e743332 20667764 7265766d 696e2c20 nt32 fwdrevmin, \n- 0x003f0098 75696e74 33322072 6172656b 6d657265 uint32 rarekmere\n- 0x003f00a8 61726c79 6b696c6c 2c207569 6e743332 arlykill, uint32\n- 0x003f00b8 20626173 65737065 72686173 682c2075 basesperhash, u\n- 0x003f00c8 696e7433 32206d69 6c6c696f 6e686173 int32 millionhas\n- 0x003f00d8 68657370 65726275 66666572 2c207374 hesperbuffer, st\n- 0x003f00e8 643a3a73 7472696e 67202620 68617368 d::string & hash\n- 0x003f00f8 73746174 66696c65 6e616d65 2c20636f statfilename, co\n- 0x003f0108 6e737420 7374643a 3a737472 696e6720 nst std::string \n- 0x003f0118 26206469 72656374 6f727929 00000000 & directory)....\n- 0x003f0128 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003f0138 6963733c 54564841 53485f54 3e3a3a70 ics::p\n- 0x003f0148 7269765f 77726974 65486173 68537461 riv_writeHashSta\n- 0x003f0158 7446696c 65486561 64657228 677a4669 tFileHeader(gzFi\n- 0x003f0168 6c652026 20677a66 2c207569 6e743332 le & gzf, uint32\n- 0x003f0178 20626173 65737065 72686173 682c2075 basesperhash, u\n- 0x003f0188 696e7438 20736f72 74737461 7475732c int8 sortstatus,\n- 0x003f0198 2075696e 74363420 6e756d65 6c656d29 uint64 numelem)\n- 0x003f01a8 00000000 766f6964 20486173 68537461 ....void HashSta\n- 0x003f01b8 74697374 6963733c 54564841 53485f54 tistics::priv_phsCommo\n- 0x003f01d8 6e28626f 6f6c2061 6c736f73 61766573 n(bool alsosaves\n- 0x003f01e8 696e676c 65686173 6865732c 2075696e inglehashes, uin\n- 0x003f01f8 74333220 62617365 73706572 68617368 t32 basesperhash\n- 0x003f0208 2c20696e 74333220 6d656761 62797465 , int32 megabyte\n- 0x003f0218 73666f72 62756666 65722c20 636f6e73 sforbuffer, cons\n- 0x003f0228 74207374 643a3a73 7472696e 67202620 t std::string & \n- 0x003f0238 746d7064 69726563 746f7279 29000000 tmpdirectory)...\n- 0x003f0248 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003f0258 6963733c 54564841 53485f54 3e3a3a70 ics::p\n- 0x003f0268 7269765f 73617665 48617368 56537461 riv_saveHashVSta\n- 0x003f0278 74697374 69637328 677a4669 6c652026 tistics(gzFile &\n- 0x003f0288 20677a66 29000000 626f6f6c 20486173 gzf)...bool Has\n- 0x003f0298 68537461 74697374 6963733c 54564841 hStatistics::priv_dn_T\n- 0x003f02b8 65737453 696e676c 65536571 28526561 estSingleSeq(Rea\n- 0x003f02c8 64202620 61637472 6561642c 20737464 d & actread, std\n- 0x003f02d8 3a3a7665 63746f72 3c75696e 74383e20 ::vector \n- 0x003f02e8 2620646e 5f616c6c 6f772c20 7374643a & dn_allow, std:\n- 0x003f02f8 3a766563 746f723c 73697a65 5f743e20 :vector \n- 0x003f0308 2620646e 5f766861 7368696e 64657865 & dn_vhashindexe\n- 0x003f0318 73290000 48617368 53746174 69737469 s)..HashStatisti\n- 0x003f0328 63733c54 56484153 485f543e 3a3a7072 cs::pr\n- 0x003f0338 69765f61 72625f44 6f537475 66662852 iv_arb_DoStuff(R\n- 0x003f0348 65616450 6f6f6c20 26207270 2c207369 eadPool & rp, si\n- 0x003f0358 7a655f74 20617667 68617368 636f762c ze_t avghashcov,\n- 0x003f0368 20737464 3a3a7665 63746f72 3c686173 std::vector & hashs\n- 0x003f0388 74617473 2c20636f 6e737420 75696e74 tats, const uint\n- 0x003f0398 33322062 61736573 70657268 6173682c 32 basesperhash,\n- 0x003f03a8 20737464 3a3a7665 63746f72 3c687376 std::vector & hssh\n- 0x003f03c8 6f727463 7574732c 20626f6f 6c206d61 ortcuts, bool ma\n- 0x003f03d8 736b6e61 73747972 65706561 74732c20 sknastyrepeats, \n- 0x003f03e8 696e7433 32206672 6f6d6964 2c20696e int32 fromid, in\n- 0x003f03f8 74333220 746f6964 2c20626f 6f6c2074 t32 toid, bool t\n- 0x003f0408 7275656b 6d657266 6f726b73 29000000 ruekmerforks)...\n- 0x003f0418 766f6964 20486173 68537461 74697374 void HashStatist\n- 0x003f0428 6963733c 54564841 53485f54 3e3a3a70 ics::p\n- 0x003f0438 7269765f 6172625f 74687265 61642875 riv_arb_thread(u\n- 0x003f0448 696e7433 32207468 72656164 6e756d2c int32 threadnum,\n- 0x003f0458 20617262 735f7468 72656164 73686172 arbs_threadshar\n- 0x003f0468 65636f6e 74726f6c 5f74202a 20747363 econtrol_t * tsc\n- 0x003f0478 70747229 00000000 73697a65 5f742048 ptr)....size_t H\n- 0x003f0488 61736853 74617469 73746963 733c5456 ashStatistics::priv_ca\n- 0x003f04a8 6c634d69 64486173 68537461 74496e64 lcMidHashStatInd\n- 0x003f04b8 65782863 6f6e7374 20737464 3a3a7665 ex(const std::ve\n- 0x003f04c8 63746f72 3c686173 68737461 745f743e ctor\n- 0x003f04d8 20262068 61736873 74617473 2c207369 & hashstats, si\n- 0x003f04e8 7a655f74 20646f6e 74636172 65706572 ze_t dontcareper\n- 0x003f04f8 63656e74 29000000 766f6964 20486173 cent)...void Has\n- 0x003f0508 68537461 74697374 6963733c 54564841 hStatistics::priv_make\n- 0x003f0528 48617368 53746174 41727261 7953686f HashStatArraySho\n- 0x003f0538 72746375 74732829 00000000 73697a65 rtcuts()....size\n- 0x003f0548 5f742048 61736853 74617469 73746963 _t HashStatistic\n- 0x003f0558 733c5456 48415348 5f543e3a 3a707269 s::pri\n- 0x003f0568 765f6372 65617465 48617368 53746174 v_createHashStat\n- 0x003f0578 69737469 63734669 6c652873 74643a3a isticsFile(std::\n- 0x003f0588 73747269 6e672026 20686173 68737461 string & hashsta\n- 0x003f0598 7466696c 656e616d 652c2073 74643a3a tfilename, std::\n- 0x003f05a8 76656374 6f723c73 74643a3a 73747269 vector & hashfilena\n- 0x003f05c8 6d65732c 20737464 3a3a7665 63746f72 mes, std::vector\n- 0x003f05d8 3c73697a 655f743e 20262065 6c656d65 & eleme\n- 0x003f05e8 6e747370 65726669 6c652c20 75696e74 ntsperfile, uint\n- 0x003f05f8 33322066 77647265 766d696e 2c20626f 32 fwdrevmin, bo\n- 0x003f0608 6f6c2061 6c736f73 61766573 696e676c ol alsosavesingl\n- 0x003f0618 65686173 68657329 00000000 73697a65 ehashes)....size\n- 0x003f0628 5f742048 61736853 74617469 73746963 _t HashStatistic\n- 0x003f0638 733c5456 48415348 5f543e3a 3a707269 s::pri\n- 0x003f0648 765f7772 69746543 6f6d7072 65737365 v_writeCompresse\n- 0x003f0658 64484642 2873697a 655f7420 6866696e dHFB(size_t hfin\n- 0x003f0668 6465782c 20737464 3a3a7665 63746f72 dex, std::vector\n- 0x003f0678 3c686173 68737461 745f743e 20262068 & h\n- 0x003f0688 66622c20 75696e74 33322072 6172656b fb, uint32 rarek\n- 0x003f0698 6d657265 61726c79 6b696c6c 2c20677a merearlykill, gz\n- 0x003f06a8 46696c65 20262067 7a662c20 626f6f6c File & gzf, bool\n- 0x003f06b8 20666f72 63652900 766f6964 20626f6f force).void boo\n- 0x003f06c8 73743a3a 6d757465 783a3a75 6e6c6f63 st::mutex::unloc\n- 0x003f06d8 6b282900 21706f73 69783a3a 70746872 k().!posix::pthr\n- 0x003f06e8 6561645f 6d757465 785f756e 6c6f636b ead_mutex_unlock\n- 0x003f06f8 28266d29 00000000 626f6f73 743a3a63 (&m)....boost::c\n- 0x003f0708 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n- 0x003f0718 653a3a7e 636f6e64 6974696f 6e5f7661 e::~condition_va\n- 0x003f0728 72696162 6c652829 00000000 2f757372 riable()..../usr\n- 0x003f0738 2f696e63 6c756465 2f626f6f 73742f74 /include/boost/t\n- 0x003f0748 68726561 642f7074 68726561 642f636f hread/pthread/co\n- 0x003f0758 6e646974 696f6e5f 76617269 61626c65 ndition_variable\n- 0x003f0768 5f667764 2e687070 00000000 21706f73 _fwd.hpp....!pos\n- 0x003f0778 69783a3a 70746872 6561645f 6d757465 ix::pthread_mute\n- 0x003f0788 785f6465 7374726f 79282669 6e746572 x_destroy(&inter\n- 0x003f0798 6e616c5f 6d757465 78290000 21706f73 nal_mutex)..!pos\n- 0x003f07a8 69783a3a 70746872 6561645f 636f6e64 ix::pthread_cond\n- 0x003f07b8 5f646573 74726f79 2826636f 6e642900 _destroy(&cond).\n- 0x003f07c8 54686973 20686173 68207361 76652073 This hash save s\n- 0x003f07d8 686f756c 64206e6f 74206265 2063616c hould not be cal\n- 0x003f07e8 6c656420 616e796d 6f72652c 2061626f led anymore, abo\n- 0x003f07f8 7274696e 672e0a00 68617368 3a200000 rting...hash: ..\n- 0x003f0808 66636f75 6e743a20 00000000 0972636f fcount: .....rco\n- 0x003f0818 756e743a 20000000 096c6f77 706f7364 unt: ....lowposd\n- 0x003f0828 343a2000 09736571 74797065 3a200000 4: ..seqtype: ..\n- 0x003f0838 096b6d66 3a200000 206b6d72 3a200000 .kmf: .. kmr: ..\n- 0x003f0848 2066723a 20000000 626f6f73 743a3a63 fr: ...boost::c\n- 0x003f0858 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n- 0x003f0868 653a3a63 6f6e6469 74696f6e 5f766172 e::condition_var\n- 0x003f0878 6961626c 65282920 636f6e73 74727563 iable() construc\n- 0x003f0888 746f7220 6661696c 65642069 6e207074 tor failed in pt\n- 0x003f0898 68726561 645f6d75 7465785f 696e6974 hread_mutex_init\n- 0x003f08a8 00000000 696e7420 626f6f73 743a3a70 ....int boost::p\n- 0x003f08b8 6f736978 3a3a7074 68726561 645f636f osix::pthread_co\n- 0x003f08c8 6e645f69 6e697428 70746872 6561645f nd_init(pthread_\n- 0x003f08d8 636f6e64 5f742a29 00000000 2f757372 cond_t*)..../usr\n- 0x003f08e8 2f696e63 6c756465 2f626f6f 73742f74 /include/boost/t\n- 0x003f08f8 68726561 642f7074 68726561 642f7074 hread/pthread/pt\n- 0x003f0908 68726561 645f6865 6c706572 732e6870 hread_helpers.hp\n- 0x003f0918 70000000 21707468 72656164 5f636f6e p...!pthread_con\n- 0x003f0928 64617474 725f7365 74636c6f 636b2826 dattr_setclock(&\n- 0x003f0938 61747472 2c203129 00000000 21707468 attr, 1)....!pth\n- 0x003f0948 72656164 5f636f6e 64617474 725f6465 read_condattr_de\n- 0x003f0958 7374726f 79282661 74747229 00000000 stroy(&attr)....\n- 0x003f0968 626f6f73 743a3a63 6f6e6469 74696f6e boost::condition\n- 0x003f0978 5f766172 6961626c 653a3a63 6f6e6469 _variable::condi\n- 0x003f0988 74696f6e 5f766172 6961626c 65282900 tion_variable().\n- 0x003f0998 626f6f73 743a3a63 6f6e6469 74696f6e boost::condition\n- 0x003f09a8 5f766172 6961626c 653a3a63 6f6e6469 _variable::condi\n- 0x003f09b8 74696f6e 5f766172 6961626c 65282920 tion_variable() \n- 0x003f09c8 636f6e73 74727563 746f7220 6661696c constructor fail\n- 0x003f09d8 65642069 6e207074 68726561 645f636f ed in pthread_co\n- 0x003f09e8 6e645f69 6e697400 626f6f73 743a206d nd_init.boost: m\n- 0x003f09f8 75746578 206c6f63 6b206661 696c6564 utex lock failed\n- 0x003f0a08 20696e20 70746872 6561645f 6d757465 in pthread_mute\n- 0x003f0a18 785f6c6f 636b0000 626f6f73 743a3a64 x_lock..boost::d\n- 0x003f0a28 65746169 6c3a3a69 6e746572 72757074 etail::interrupt\n- 0x003f0a38 696f6e5f 63686563 6b65723a 3a696e74 ion_checker::int\n- 0x003f0a48 65727275 7074696f 6e5f6368 65636b65 erruption_checke\n- 0x003f0a58 72287074 68726561 645f6d75 7465785f r(pthread_mutex_\n- 0x003f0a68 742a2c20 70746872 6561645f 636f6e64 t*, pthread_cond\n- 0x003f0a78 5f742a29 00000000 2f757372 2f696e63 _t*)..../usr/inc\n- 0x003f0a88 6c756465 2f626f6f 73742f74 68726561 lude/boost/threa\n- 0x003f0a98 642f7074 68726561 642f7468 72656164 d/pthread/thread\n- 0x003f0aa8 5f646174 612e6870 70000000 21706f73 _data.hpp...!pos\n- 0x003f0ab8 69783a3a 70746872 6561645f 6d757465 ix::pthread_mute\n- 0x003f0ac8 785f6c6f 636b286d 29000000 766f6964 x_lock(m)...void\n- 0x003f0ad8 20626f6f 73743a3a 73686172 65645f6d boost::shared_m\n- 0x003f0ae8 75746578 3a3a7374 6174655f 64617461 utex::state_data\n- 0x003f0af8 3a3a6173 73657274 5f6c6f63 6b656428 ::assert_locked(\n- 0x003f0b08 2920636f 6e737400 2f757372 2f696e63 ) const./usr/inc\n- 0x003f0b18 6c756465 2f626f6f 73742f74 68726561 lude/boost/threa\n- 0x003f0b28 642f7074 68726561 642f7368 61726564 d/pthread/shared\n- 0x003f0b38 5f6d7574 65782e68 70700000 6578636c _mutex.hpp..excl\n- 0x003f0b48 75736976 65000000 73686172 65645f63 usive...shared_c\n- 0x003f0b58 6f756e74 3d3d3000 21207570 67726164 ount==0.! upgrad\n- 0x003f0b68 65000000 626f6f73 743a3a70 74687265 e...boost::pthre\n- 0x003f0b78 61643a3a 70746872 6561645f 6d757465 ad::pthread_mute\n- 0x003f0b88 785f7363 6f706564 5f6c6f63 6b3a3a70 x_scoped_lock::p\n- 0x003f0b98 74687265 61645f6d 75746578 5f73636f thread_mutex_sco\n- 0x003f0ba8 7065645f 6c6f636b 28707468 72656164 ped_lock(pthread\n- 0x003f0bb8 5f6d7574 65785f74 2a290000 2f757372 _mutex_t*)../usr\n- 0x003f0bc8 2f696e63 6c756465 2f626f6f 73742f74 /include/boost/t\n- 0x003f0bd8 68726561 642f7074 68726561 642f7074 hread/pthread/pt\n- 0x003f0be8 68726561 645f6d75 7465785f 73636f70 hread_mutex_scop\n- 0x003f0bf8 65645f6c 6f636b2e 68707000 766f6964 ed_lock.hpp.void\n- 0x003f0c08 20626f6f 73743a3a 636f6e64 6974696f boost::conditio\n- 0x003f0c18 6e5f7661 72696162 6c653a3a 6e6f7469 n_variable::noti\n- 0x003f0c28 66795f6f 6e652829 00000000 2f757372 fy_one()..../usr\n- 0x003f0c38 2f696e63 6c756465 2f626f6f 73742f74 /include/boost/t\n- 0x003f0c48 68726561 642f7074 68726561 642f636f hread/pthread/co\n- 0x003f0c58 6e646974 696f6e5f 76617269 61626c65 ndition_variable\n- 0x003f0c68 2e687070 00000000 21706f73 69783a3a .hpp....!posix::\n- 0x003f0c78 70746872 6561645f 636f6e64 5f736967 pthread_cond_sig\n- 0x003f0c88 6e616c28 26636f6e 64290000 766f6964 nal(&cond)..void\n- 0x003f0c98 20626f6f 73743a3a 70746872 6561643a boost::pthread:\n- 0x003f0ca8 3a707468 72656164 5f6d7574 65785f73 :pthread_mutex_s\n- 0x003f0cb8 636f7065 645f6c6f 636b3a3a 756e6c6f coped_lock::unlo\n- 0x003f0cc8 636b2829 00000000 766f6964 20626f6f ck()....void boo\n- 0x003f0cd8 73743a3a 636f6e64 6974696f 6e5f7661 st::condition_va\n- 0x003f0ce8 72696162 6c653a3a 6e6f7469 66795f61 riable::notify_a\n- 0x003f0cf8 6c6c2829 00000000 21706f73 69783a3a ll()....!posix::\n- 0x003f0d08 70746872 6561645f 636f6e64 5f62726f pthread_cond_bro\n- 0x003f0d18 61646361 73742826 636f6e64 29000000 adcast(&cond)...\n- 0x003f0d28 766f6964 20626f6f 73743a3a 73686172 void boost::shar\n- 0x003f0d38 65645f6d 75746578 3a3a7374 6174655f ed_mutex::state_\n- 0x003f0d48 64617461 3a3a6173 73657274 5f6c6f63 data::assert_loc\n- 0x003f0d58 6b5f7368 61726564 28292063 6f6e7374 k_shared() const\n- 0x003f0d68 00000000 21206578 636c7573 69766500 ....! exclusive.\n- 0x003f0d78 73686172 65645f63 6f756e74 3e300000 shared_count>0..\n- 0x003f0d88 68617374 73746174 20617272 6179206e haststat array n\n- 0x003f0d98 6f742073 6f727465 64206279 20636f75 ot sorted by cou\n- 0x003f0da8 6e743f3f 3f000000 436f756c 64206e6f nt???...Could no\n- 0x003f0db8 74207772 69746520 68656164 65722069 t write header i\n- 0x003f0dc8 6e666f72 6d617469 6f6e2e20 49732074 nformation. Is t\n- 0x003f0dd8 68652064 69736b20 66756c6c 206f7220 he disk full or \n- 0x003f0de8 71756f74 61207265 61636865 643f2043 quota reached? C\n- 0x003f0df8 68616e67 65642061 63636573 73207065 hanged access pe\n- 0x003f0e08 726d6973 73696f6e 733f0a00 436f756c rmissions?..Coul\n- 0x003f0e18 64206e6f 74207361 76652061 6e796d6f d not save anymo\n- 0x003f0e28 72652074 68652068 61736820 73746174 re the hash stat\n- 0x003f0e38 69737469 63732028 31292e20 4469736b istics (1). Disk\n- 0x003f0e48 2066756c 6c3f2043 68616e67 65642070 full? Changed p\n- 0x003f0e58 65726d69 7373696f 6e733f00 4e6f206d ermissions?.No m\n- 0x003f0e68 61676963 20666f75 6e64206f 72207472 agic found or tr\n- 0x003f0e78 756e6361 7465643f 0a000000 4e6f7420 uncated?....Not \n- 0x003f0e88 656e6f75 67682062 79746573 20726561 enough bytes rea\n- 0x003f0e98 6420666f 72206865 61646572 20696e66 d for header inf\n- 0x003f0ea8 6f726d61 74696f6e 2e204669 6c652074 ormation. File t\n- 0x003f0eb8 72756e63 61746564 3f0a0000 54686520 runcated?...The \n- 0x003f0ec8 66696c65 206c6f6f 6b732074 6f206265 file looks to be\n- 0x003f0ed8 2061204d 49524120 48617368 53746174 a MIRA HashStat\n- 0x003f0ee8 69737469 63732066 696c652c 20627574 istics file, but\n- 0x003f0ef8 20766572 73696f6e 20000000 20616e64 version ... and\n- 0x003f0f08 206e6f74 20333f0a 00000000 72620000 not 3?.....rb..\n- 0x003f0f18 436f756c 64206e6f 74206f70 656e2000 Could not open .\n- 0x003f0f28 2c206973 20697420 70726573 656e743f , is it present?\n- 0x003f0f38 20417265 20706572 6d697373 696f6e73 Are permissions\n- 0x003f0f48 20736574 20726967 68743f00 4572726f set right?.Erro\n- 0x003f0f58 72207768 696c6520 6c6f6164 696e6720 r while loading \n- 0x003f0f68 66696c65 20000000 77623100 4572726f file ...wb1.Erro\n- 0x003f0f78 7220666f 72206669 6c652000 6e6f2073 r for file .no s\n- 0x003f0f88 686f7274 63757473 206d6164 652c206e hortcuts made, n\n- 0x003f0f98 6f742072 65616479 20666f72 20736561 ot ready for sea\n- 0x003f0fa8 72636869 6e673f00 626f6f73 7420756e rching?.boost un\n- 0x003f0fb8 69717565 5f6c6f63 6b206861 73206e6f ique_lock has no\n- 0x003f0fc8 206d7574 65780000 626f6f73 7420756e mutex..boost un\n- 0x003f0fd8 69717565 5f6c6f63 6b206f77 6e732061 ique_lock owns a\n- 0x003f0fe8 6c726561 64792074 6865206d 75746578 lready the mutex\n- 0x003f0ff8 00000000 626f6f73 7420756e 69717565 ....boost unique\n- 0x003f1008 5f6c6f63 6b20646f 65736e27 74206f77 _lock doesn't ow\n- 0x003f1018 6e207468 65206d75 74657800 626f6f73 n the mutex.boos\n- 0x003f1028 743a3a63 6f6e6469 74696f6e 5f766172 t::condition_var\n- 0x003f1038 6961626c 653a3a77 61697420 6661696c iable::wait fail\n- 0x003f1048 65642069 6e207074 68726561 645f636f ed in pthread_co\n- 0x003f1058 6e645f77 61697400 626f6f73 74207468 nd_wait.boost th\n- 0x003f1068 72656164 3a207472 79696e67 206a6f69 read: trying joi\n- 0x003f1078 6e696e67 20697473 656c6600 48617368 ning itself.Hash\n- 0x003f1088 2073697a 65200000 20646f65 73206e6f size .. does no\n- 0x003f1098 74206669 7420696e 746f2063 75727265 t fit into curre\n- 0x003f10a8 6e746c79 20757365 64206861 73682000 ntly used hash .\n- 0x003f10b8 43757272 656e7420 68617368 73746174 Current hashstat\n- 0x003f10c8 206b6d65 72207369 7a652069 73200000 kmer size is ..\n- 0x003f10d8 2c206275 74206b6d 65722073 697a6520 , but kmer size \n- 0x003f10e8 696e2064 61746120 746f206c 6f616420 in data to load \n- 0x003f10f8 69732000 203f3f3f 0a000000 41707065 is . ???....Appe\n- 0x003f1108 6e64696e 6720746f 20657869 7374696e nding to existin\n- 0x003f1118 67206861 73687374 6174206e 6f742069 g hashstat not i\n- 0x003f1128 6d706c65 6d656e74 65642079 65740a00 mplemented yet..\n- 0x003f1138 45787065 63746564 20746f20 72656164 Expected to read\n- 0x003f1148 20000000 20627974 65732c20 62757420 ... bytes, but \n- 0x003f1158 676f7420 00000000 68737368 6f727463 got ....hsshortc\n- 0x003f1168 7574732e 656d7074 79282920 3f3f3f20 uts.empty() ??? \n- 0x003f1178 61742000 626f6f73 743a3a62 61736963 at .boost::basic\n- 0x003f1188 5f666f72 6d61743c 43682c20 54722c20 _format::string_t\n- 0x003f11a8 79706520 626f6f73 743a3a62 61736963 ype boost::basic\n- 0x003f11b8 5f666f72 6d61743c 43682c20 54722c20 _format::str() co\n- 0x003f11d8 6e737420 5b776974 68204368 203d2063 nst [with Ch = c\n- 0x003f11e8 6861723b 20547220 3d207374 643a3a63 har; Tr = std::c\n- 0x003f11f8 6861725f 74726169 74733c63 6861723e har_traits\n- 0x003f1208 3b20416c 6c6f6320 3d207374 643a3a61 ; Alloc = std::a\n- 0x003f1218 6c6c6f63 61746f72 3c636861 723e3b20 llocator; \n- 0x003f1228 626f6f73 743a3a62 61736963 5f666f72 boost::basic_for\n- 0x003f1238 6d61743c 43682c20 54722c20 416c6c6f mat::string_type \n- 0x003f1258 3d207374 643a3a5f 5f637878 31313a3a = std::__cxx11::\n- 0x003f1268 62617369 635f7374 72696e67 3c636861 basic_string]./usr/include\n- 0x003f1288 2f626f6f 73742f66 6f726d61 742f666f /boost/format/fo\n- 0x003f1298 726d6174 5f696d70 6c656d65 6e746174 rmat_implementat\n- 0x003f12a8 696f6e2e 68707000 6974656d 2e706164 ion.hpp.item.pad\n- 0x003f12b8 5f736368 656d655f 20262066 6f726d61 _scheme_ & forma\n- 0x003f12c8 745f6974 656d5f74 3a3a7461 62756c61 t_item_t::tabula\n- 0x003f12d8 74696f6e 00000000 4b6d6572 20737461 tion....Kmer sta\n- 0x003f12e8 74697374 6963733a 0a000000 3d3d3d3d tistics:....====\n- 0x003f12f8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003eebb8 2a2a2a2a 2a2a2a2a 2a2a2a2a 2a2a2a0a ***************.\n+ 0x003eebc8 00000000 546f2028 756e2d29 73756273 ....To (un-)subs\n+ 0x003eebd8 63726962 65207468 65204d49 5241206d cribe the MIRA m\n+ 0x003eebe8 61696c69 6e67206c 69737473 2c207365 ailing lists, se\n+ 0x003eebf8 653a0a09 68747470 3a2f2f77 77772e63 e:..http://www.c\n+ 0x003eec08 68657672 6575782e 6f72672f 6d697261 hevreux.org/mira\n+ 0x003eec18 5f6d6169 6c696e67 6c697374 732e6874 _mailinglists.ht\n+ 0x003eec28 6d6c0a0a 41667465 72207375 62736372 ml..After subscr\n+ 0x003eec38 6962696e 672c206d 61696c20 67656e65 ibing, mail gene\n+ 0x003eec48 72616c20 71756573 74696f6e 7320746f ral questions to\n+ 0x003eec58 20746865 204d4952 41207461 6c6b206d the MIRA talk m\n+ 0x003eec68 61696c69 6e67206c 6973743a 0a096d69 ailing list:..mi\n+ 0x003eec78 72615f74 616c6b40 66726565 6c697374 ra_talk@freelist\n+ 0x003eec88 732e6f72 670a0a0a 546f2072 65706f72 s.org...To repor\n+ 0x003eec98 74206275 6773206f 72206173 6b20666f t bugs or ask fo\n+ 0x003eeca8 72206665 61747572 65732c20 706c6561 r features, plea\n+ 0x003eecb8 73652075 73652074 68652053 6f757263 se use the Sourc\n+ 0x003eecc8 65466f72 67652074 69636b65 74696e67 eForge ticketing\n+ 0x003eecd8 0a737973 74656d20 61743a0a 09687474 .system at:..htt\n+ 0x003eece8 703a2f2f 736f7572 6365666f 7267652e p://sourceforge.\n+ 0x003eecf8 6e65742f 702f6d69 72612d61 7373656d net/p/mira-assem\n+ 0x003eed08 626c6572 2f746963 6b657473 2f0a5468 bler/tickets/.Th\n+ 0x003eed18 69732065 6e737572 65732074 68617420 is ensures that \n+ 0x003eed28 72657175 65737473 20646f20 6e6f7420 requests do not \n+ 0x003eed38 67657420 6c6f7374 2e0a0a0a 00000000 get lost........\n+ 0x003eed48 436f6d70 696c6564 20696e20 626f756e Compiled in boun\n+ 0x003eed58 64747261 636b696e 67206d6f 64652e0a dtracking mode..\n+ 0x003eed68 00000000 436f6d70 696c6564 20696e20 ....Compiled in \n+ 0x003eed78 62756774 7261636b 696e6720 6d6f6465 bugtracking mode\n+ 0x003eed88 2e0a0000 436f6d70 696c6564 20776974 ....Compiled wit\n+ 0x003eed98 6820454e 41424c45 36342064 652d6163 h ENABLE64 de-ac\n+ 0x003eeda8 74697661 7465642e 0a000000 52756e74 tivated.....Runt\n+ 0x003eedb8 696d6520 73657474 696e6773 2028736f ime settings (so\n+ 0x003eedc8 7272792c 20666f72 20646562 7567293a rry, for debug):\n+ 0x003eedd8 00000000 0a095369 7a65206f 66207369 ......Size of si\n+ 0x003eede8 7a655f74 20203a20 00000000 0a095369 ze_t : ......Si\n+ 0x003eedf8 7a65206f 66207569 6e743332 20203a20 ze of uint32 : \n+ 0x003eee08 00000000 0a095369 7a65206f 66207569 ......Size of ui\n+ 0x003eee18 6e743332 5f743a20 00000000 0a095369 nt32_t: ......Si\n+ 0x003eee28 7a65206f 66207569 6e743634 20203a20 ze of uint64 : \n+ 0x003eee38 00000000 0a095369 7a65206f 66207569 ......Size of ui\n+ 0x003eee48 6e743634 5f743a20 00000000 0a437572 nt64_t: .....Cur\n+ 0x003eee58 72656e74 20737973 74656d3a 20000000 rent system: ...\n+ 0x003eee68 756e616d 65202d61 00000000 46696c65 uname -a....File\n+ 0x003eee78 206e6f74 20666f75 6e643a20 00000000 not found: ....\n+ 0x003eee88 766f6964 206d616b 6553656c 65637469 void makeSelecti\n+ 0x003eee98 6f6e5374 72696e67 53657428 7374643a onStringSet(std:\n+ 0x003eeea8 3a737472 696e6720 26206669 6c656e61 :string & filena\n+ 0x003eeeb8 6d652900 65686868 3f000000 206d6863 me).ehhh?... mhc\n+ 0x003eeec8 3d000000 2065636e 3d000000 206c656e =... ecn=... len\n+ 0x003eeed8 3d000000 53455154 4f484153 485f4c4f =...SEQTOHASH_LO\n+ 0x003eeee8 4f505354 41525420 62617365 73706572 OPSTART basesper\n+ 0x003eeef8 68617368 20000000 203e2061 6c6c6f77 hash ... > allow\n+ 0x003eef08 65642073 697a6520 666f7220 56484153 ed size for VHAS\n+ 0x003eef18 4854203f 00000000 496c6c65 67616c20 HT ?....Illegal \n+ 0x003eef28 62617365 20270000 27202841 53434949 base '..' (ASCII\n+ 0x003eef38 20000000 29206174 20706f73 6974696f ...) at positio\n+ 0x003eef48 6e200000 20696e20 73657175 656e6365 n .. in sequence\n+ 0x003eef58 20000000 286e6f20 6e616d65 20676976 ...(no name giv\n+ 0x003eef68 656e2900 506f7075 6c617469 6e672048 en).Populating H\n+ 0x003eef78 534e3a00 205b0000 255d2000 4f6f6f70 SN:. [..%] .Ooop\n+ 0x003eef88 733f2000 20637572 72656e74 693c3020 s? . currenti<0 \n+ 0x003eef98 7c7c2063 75727265 6e74693e 3d204853 || currenti>= HS\n+ 0x003eefa8 5f687376 5f686173 68737461 74732e73 _hsv_hashstats.s\n+ 0x003eefb8 697a6528 29203f3f 3f000000 206e6578 ize() ???... nex\n+ 0x003eefc8 74666f75 6e64693c 30207c7c 206e6578 tfoundi<0 || nex\n+ 0x003eefd8 74666f75 6e64693e 3d204853 5f687376 tfoundi>= HS_hsv\n+ 0x003eefe8 5f686173 68737461 74732e73 697a6528 _hashstats.size(\n+ 0x003eeff8 29203f3f 3f000000 4d656469 616e203e ) ???...Median >\n+ 0x003ef008 3d200000 64657175 653a3a5f 4d5f6e65 = ..deque::_M_ne\n+ 0x003ef018 775f656c 656d656e 74735f61 745f6261 w_elements_at_ba\n+ 0x003ef028 636b0000 436f6c6c 65637469 6e672044 ck..Collecting D\n+ 0x003ef038 42472073 74617473 3a000000 31292072 BG stats:...1) r\n+ 0x003ef048 65766873 7074723d 3d6e756c 6c707472 evhsptr==nullptr\n+ 0x003ef058 203f3f3f 20666f72 20000000 20766572 ??? for ... ver\n+ 0x003ef068 73757320 00000000 32292072 65766873 sus ....2) revhs\n+ 0x003ef078 7074723d 3d6e756c 6c707472 203f3f3f ptr==nullptr ???\n+ 0x003ef088 00000000 74616b65 6e5b6163 74695d21 ....taken[acti]!\n+ 0x003ef098 3d74616b 656e5b72 65766873 695d203f =taken[revhsi] ?\n+ 0x003ef0a8 3f3f0000 61737370 74722d3e 656d7074 ??..assptr->empt\n+ 0x003ef0b8 79282920 3f3f3f00 656e6420 63686563 y() ???.end chec\n+ 0x003ef0c8 6b207275 6e766973 6974206e 6f742063 k runvisit not c\n+ 0x003ef0d8 6f6d706c 6574656c 7920656d 7074793f ompletely empty?\n+ 0x003ef0e8 3f3f0000 53746172 74696e67 20707269 ??..Starting pri\n+ 0x003ef0f8 765f7364 62675f70 6f70756c 61746548 v_sdbg_populateH\n+ 0x003ef108 61736853 7461744e 6f646573 00000000 ashStatNodes....\n+ 0x003ef118 53746172 74696e67 20707269 765f7364 Starting priv_sd\n+ 0x003ef128 62675f61 73736967 6e477261 70684944 bg_assignGraphID\n+ 0x003ef138 734d616b 65536571 73416e64 436f6c6c sMakeSeqsAndColl\n+ 0x003ef148 65637453 74617473 00000000 766f6964 ectStats....void\n+ 0x003ef158 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003ef168 54564841 53485f54 3e3a3a63 6865636b TVHASH_T>::check\n+ 0x003ef178 53657175 656e6365 466f7253 44424743 SequenceForSDBGC\n+ 0x003ef188 68696d65 72617328 29000000 766f6964 himeras()...void\n+ 0x003ef198 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003ef1a8 54564841 53485f54 3e3a3a70 726f706f TVHASH_T>::propo\n+ 0x003ef1b8 73655344 42474564 69747328 29000000 seSDBGEdits()...\n+ 0x003ef1c8 766f6964 20486173 68537461 74697374 void HashStatist\n+ 0x003ef1d8 6963733c 54564841 53485f54 3e3a3a70 ics::p\n+ 0x003ef1e8 7269765f 73646267 5f617373 69676e47 riv_sdbg_assignG\n+ 0x003ef1f8 72617068 4944734d 616b6553 65717341 raphIDsMakeSeqsA\n+ 0x003ef208 6e64436f 6c6c6563 74537461 74730000 ndCollectStats..\n+ 0x003ef218 766f6964 20486173 68537461 74697374 void HashStatist\n+ 0x003ef228 6963733c 54564841 53485f54 3e3a3a70 ics::p\n+ 0x003ef238 7269765f 73646267 5f706f70 756c6174 riv_sdbg_populat\n+ 0x003ef248 65486173 68537461 744e6f64 65732829 eHashStatNodes()\n+ 0x003ef258 00000000 ffbf7f3f efaf6f2f df9f5f1f .......?..o/.._.\n+ 0x003ef268 cf8f4f0f fbbb7b3b ebab6b2b db9b5b1b ..O...{;..k+..[.\n+ 0x003ef278 cb8b4b0b f7b77737 e7a76727 d7975717 ..K...w7..g'..W.\n+ 0x003ef288 c7874707 f3b37333 e3a36323 d3935313 ..G...s3..c#..S.\n+ 0x003ef298 c3834303 febe7e3e eeae6e2e de9e5e1e ..C...~>..n...^.\n+ 0x003ef2a8 ce8e4e0e faba7a3a eaaa6a2a da9a5a1a ..N...z:..j*..Z.\n+ 0x003ef2b8 ca8a4a0a f6b67636 e6a66626 d6965616 ..J...v6..f&..V.\n+ 0x003ef2c8 c6864606 f2b27232 e2a26222 d2925212 ..F...r2..b\"..R.\n+ 0x003ef2d8 c2824202 fdbd7d3d edad6d2d dd9d5d1d ..B...}=..m-..].\n+ 0x003ef2e8 cd8d4d0d f9b97939 e9a96929 d9995919 ..M...y9..i)..Y.\n+ 0x003ef2f8 c9894909 f5b57535 e5a56525 d5955515 ..I...u5..e%..U.\n+ 0x003ef308 c5854505 f1b17131 e1a16121 d1915111 ..E...q1..a!..Q.\n+ 0x003ef318 c1814101 fcbc7c3c ecac6c2c dc9c5c1c ..A...|<..l,..\\.\n+ 0x003ef328 cc8c4c0c f8b87838 e8a86828 d8985818 ..L...x8..h(..X.\n+ 0x003ef338 c8884808 f4b47434 e4a46424 d4945414 ..H...t4..d$..T.\n+ 0x003ef348 c4844404 f0b07030 e0a06020 d0905010 ..D...p0..` ..P.\n+ 0x003ef358 c0804000 88130000 d0070000 e8030000 ..@.............\n+ 0x003ef368 f4010000 c8000000 64000000 626f6f73 ........d...boos\n+ 0x003ef378 743a3a66 6f726d61 745f6572 726f723a t::format_error:\n+ 0x003ef388 20666f72 6d617420 67656e65 72696320 format generic \n+ 0x003ef398 6661696c 75726500 626f6f73 743a3a62 failure.boost::b\n+ 0x003ef3a8 61645f66 6f726d61 745f7374 72696e67 ad_format_string\n+ 0x003ef3b8 3a20666f 726d6174 2d737472 696e6720 : format-string \n+ 0x003ef3c8 69732069 6c6c2d66 6f726d65 64000000 is ill-formed...\n+ 0x003ef3d8 626f6f73 743a3a74 6f6f5f66 65775f61 boost::too_few_a\n+ 0x003ef3e8 7267733a 20666f72 6d61742d 73747269 rgs: format-stri\n+ 0x003ef3f8 6e672072 65666572 72656420 746f206d ng referred to m\n+ 0x003ef408 6f726520 61726775 6d656e74 73207468 ore arguments th\n+ 0x003ef418 616e2077 65726520 70617373 65640000 an were passed..\n+ 0x003ef428 626f6f73 743a3a74 6f6f5f6d 616e795f boost::too_many_\n+ 0x003ef438 61726773 3a20666f 726d6174 2d737472 args: format-str\n+ 0x003ef448 696e6720 72656665 72726564 20746f20 ing referred to \n+ 0x003ef458 66657765 72206172 67756d65 6e747320 fewer arguments \n+ 0x003ef468 7468616e 20776572 65207061 73736564 than were passed\n+ 0x003ef478 00000000 626f6f73 743a3a69 6f3a3a62 ....boost::io::b\n+ 0x003ef488 61736963 5f616c74 73747269 6e676275 asic_altstringbu\n+ 0x003ef498 663c4368 2c205472 2c20416c 6c6f633e f\n+ 0x003ef4a8 3a3a706f 735f7479 70652062 6f6f7374 ::pos_type boost\n+ 0x003ef4b8 3a3a696f 3a3a6261 7369635f 616c7473 ::io::basic_alts\n+ 0x003ef4c8 7472696e 67627566 3c43682c 2054722c tringbuf::seekpos\n+ 0x003ef4e8 28626f6f 73743a3a 696f3a3a 62617369 (boost::io::basi\n+ 0x003ef4f8 635f616c 74737472 696e6762 75663c43 c_altstringbuf::p\n+ 0x003ef518 6f735f74 7970652c 20737464 3a3a696f os_type, std::io\n+ 0x003ef528 735f6261 73653a3a 6f70656e 6d6f6465 s_base::openmode\n+ 0x003ef538 29205b77 69746820 4368203d 20636861 ) [with Ch = cha\n+ 0x003ef548 723b2054 72203d20 7374643a 3a636861 r; Tr = std::cha\n+ 0x003ef558 725f7472 61697473 3c636861 723e3b20 r_traits; \n+ 0x003ef568 416c6c6f 63203d20 7374643a 3a616c6c Alloc = std::all\n+ 0x003ef578 6f636174 6f723c63 6861723e 3b20626f ocator; bo\n+ 0x003ef588 6f73743a 3a696f3a 3a626173 69635f61 ost::io::basic_a\n+ 0x003ef598 6c747374 72696e67 6275663c 43682c20 ltstringbuf::pos_\n+ 0x003ef5b8 74797065 203d2073 74643a3a 66706f73 type = std::fpos\n+ 0x003ef5c8 3c5f5f6d 62737461 74655f74 3e3b2073 <__mbstate_t>; s\n+ 0x003ef5d8 74643a3a 696f735f 62617365 3a3a6f70 td::ios_base::op\n+ 0x003ef5e8 656e6d6f 6465203d 20737464 3a3a696f enmode = std::io\n+ 0x003ef5f8 735f6261 73653a3a 6f70656e 6d6f6465 s_base::openmode\n+ 0x003ef608 5d000000 2f757372 2f696e63 6c756465 ].../usr/include\n+ 0x003ef618 2f626f6f 73742f66 6f726d61 742f616c /boost/format/al\n+ 0x003ef628 745f7373 74726561 6d5f696d 706c2e68 t_sstream_impl.h\n+ 0x003ef638 70700000 766f6964 20626f6f 73743a3a pp..void boost::\n+ 0x003ef648 64657461 696c3a3a 696e7465 72727570 detail::interrup\n+ 0x003ef658 74696f6e 5f636865 636b6572 3a3a756e tion_checker::un\n+ 0x003ef668 6c6f636b 5f69665f 6c6f636b 65642829 lock_if_locked()\n+ 0x003ef678 00000000 21706f73 69783a3a 70746872 ....!posix::pthr\n+ 0x003ef688 6561645f 6d757465 785f756e 6c6f636b ead_mutex_unlock\n+ 0x003ef698 286d2900 626f6f73 743a3a62 61736963 (m).boost::basic\n+ 0x003ef6a8 5f666f72 6d61743c 43682c20 54722c20 _format& boost::b\n+ 0x003ef6c8 61736963 5f666f72 6d61743c 43682c20 asic_format::clea\n+ 0x003ef6e8 72282920 5b776974 68204368 203d2063 r() [with Ch = c\n+ 0x003ef6f8 6861723b 20547220 3d207374 643a3a63 har; Tr = std::c\n+ 0x003ef708 6861725f 74726169 74733c63 6861723e har_traits\n+ 0x003ef718 3b20416c 6c6f6320 3d207374 643a3a61 ; Alloc = std::a\n+ 0x003ef728 6c6c6f63 61746f72 3c636861 723e5d00 llocator].\n+ 0x003ef738 626f756e 645f2e73 697a6528 293d3d30 bound_.size()==0\n+ 0x003ef748 207c7c20 6e756d5f 61726773 5f203d3d || num_args_ ==\n+ 0x003ef758 20737461 7469635f 63617374 3c696e74 static_cast(bound_.size())\n+ 0x003ef778 00000000 626f6f73 743a3a62 61736963 ....boost::basic\n+ 0x003ef788 5f666f72 6d61743c 43682c20 54722c20 _format& boost::b\n+ 0x003ef7a8 61736963 5f666f72 6d61743c 43682c20 asic_format::pars\n+ 0x003ef7c8 6528636f 6e737420 73747269 6e675f74 e(const string_t\n+ 0x003ef7d8 79706526 29205b77 69746820 4368203d ype&) [with Ch =\n+ 0x003ef7e8 20636861 723b2054 72203d20 7374643a char; Tr = std:\n+ 0x003ef7f8 3a636861 725f7472 61697473 3c636861 :char_traits; Alloc = std:\n+ 0x003ef818 3a616c6c 6f636174 6f723c63 6861723e :allocator\n+ 0x003ef828 3b20626f 6f73743a 3a626173 69635f66 ; boost::basic_f\n+ 0x003ef838 6f726d61 743c4368 2c205472 2c20416c ormat::string_typ\n+ 0x003ef858 65203d20 7374643a 3a5f5f63 78783131 e = std::__cxx11\n+ 0x003ef868 3a3a6261 7369635f 73747269 6e673c63 ::basic_string].../usr/inc\n+ 0x003ef888 6c756465 2f626f6f 73742f66 6f726d61 lude/boost/forma\n+ 0x003ef898 742f7061 7273696e 672e6870 70000000 t/parsing.hpp...\n+ 0x003ef8a8 73746174 69635f63 6173743c 756e7369 static_cast(cur_it\n+ 0x003ef8c8 656d2920 3c206974 656d735f 2e73697a em) < items_.siz\n+ 0x003ef8d8 65282920 7c7c2063 75725f69 74656d3d e() || cur_item=\n+ 0x003ef8e8 3d300000 766f6964 20626f6f 73743a3a =0..void boost::\n+ 0x003ef8f8 696f3a3a 64657461 696c3a3a 666f726d io::detail::form\n+ 0x003ef908 61745f69 74656d3c 43682c20 54722c20 at_item::compute_\n+ 0x003ef928 73746174 65732829 205b7769 74682043 states() [with C\n+ 0x003ef938 68203d20 63686172 3b205472 203d2073 h = char; Tr = s\n+ 0x003ef948 74643a3a 63686172 5f747261 6974733c td::char_traits<\n+ 0x003ef958 63686172 3e3b2041 6c6c6f63 203d2073 char>; Alloc = s\n+ 0x003ef968 74643a3a 616c6c6f 6361746f 723c6368 td::allocator]..../usr/inc\n+ 0x003ef988 6c756465 2f626f6f 73742f66 6f726d61 lude/boost/forma\n+ 0x003ef998 742f696e 7465726e 616c732e 68707000 t/internals.hpp.\n+ 0x003ef9a8 2128666d 74737461 74655f2e 666c6167 !(fmtstate_.flag\n+ 0x003ef9b8 735f2026 28737464 3a3a696f 735f6261 s_ &(std::ios_ba\n+ 0x003ef9c8 73653a3a 61646a75 73746669 656c6420 se::adjustfield \n+ 0x003ef9d8 5e737464 3a3a696f 735f6261 73653a3a ^std::ios_base::\n+ 0x003ef9e8 6c656674 29290000 766f6964 20486173 left))..void Has\n+ 0x003ef9f8 68537461 74697374 6963733c 54564841 hStatistics::inANotB(H\n+ 0x003efa18 61736853 74617469 73746963 73202620 ashStatistics & \n+ 0x003efa28 6873612c 20486173 68537461 74697374 hsa, HashStatist\n+ 0x003efa38 69637320 26206873 62290000 766f6964 ics & hsb)..void\n+ 0x003efa48 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003efa58 54564841 53485f54 3e3a3a69 6e41416e TVHASH_T>::inAAn\n+ 0x003efa68 64422848 61736853 74617469 73746963 dB(HashStatistic\n+ 0x003efa78 73202620 6873612c 20486173 68537461 s & hsa, HashSta\n+ 0x003efa88 74697374 69637320 26206873 62290000 tistics & hsb)..\n+ 0x003efa98 766f6964 20486173 68537461 74697374 void HashStatist\n+ 0x003efaa8 6963733c 54564841 53485f54 3e3a3a65 ics::e\n+ 0x003efab8 7374696d 44696769 4e6f726d 436f7628 stimDigiNormCov(\n+ 0x003efac8 52656164 20262061 63747265 61642900 Read & actread).\n+ 0x003efad8 636f6e73 74207479 70656e61 6d652048 const typename H\n+ 0x003efae8 61736853 74617469 73746963 733c5456 ashStatistics::hashsta\n+ 0x003efb08 745f7420 2a204861 73685374 61746973 t_t * HashStatis\n+ 0x003efb18 74696373 3c545648 4153485f 543e3a3a tics::\n+ 0x003efb28 66696e64 56486173 6828636f 6e737420 findVHash(const \n+ 0x003efb38 68617368 73746174 5f742026 20736561 hashstat_t & sea\n+ 0x003efb48 72636876 616c2900 62616974 68697432 rchval).baithit2\n+ 0x003efb58 00000000 766f6964 20486173 68537461 ....void HashSta\n+ 0x003efb68 74697374 6963733c 54564841 53485f54 tistics::saveHashStati\n+ 0x003efb88 73746963 7328636f 6e737420 7374643a stics(const std:\n+ 0x003efb98 3a737472 696e6720 26206669 6c656e61 :string & filena\n+ 0x003efba8 6d650000 766f6964 20486173 68537461 me..void HashSta\n+ 0x003efbb8 74697374 6963733c 54564841 53485f54 tistics::loadHashStati\n+ 0x003efbd8 73746963 7328636f 6e737420 6d687368 stics(const mhsh\n+ 0x003efbe8 65616465 725f7420 26206d68 73682c20 eader_t & mhsh, \n+ 0x003efbf8 677a4669 6c652026 20677a66 29000000 gzFile & gzf)...\n+ 0x003efc08 626f6f6c 20486173 68537461 74697374 bool HashStatist\n+ 0x003efc18 6963733c 54564841 53485f54 3e3a3a6c ics::l\n+ 0x003efc28 6f616448 61736853 74617469 73746963 oadHashStatistic\n+ 0x003efc38 7346696c 65486561 64657228 677a4669 sFileHeader(gzFi\n+ 0x003efc48 6c652026 20677a66 29000000 636f6e73 le & gzf)...cons\n+ 0x003efc58 74207479 70656e61 6d652048 61736853 t typename HashS\n+ 0x003efc68 74617469 73746963 733c5456 48415348 tatistics::mhsheader_t\n+ 0x003efc88 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003efc98 54564841 53485f54 3e3a3a6c 6f616448 TVHASH_T>::loadH\n+ 0x003efca8 61736853 74617469 73746963 7346696c ashStatisticsFil\n+ 0x003efcb8 65486561 64657228 636f6e73 74207374 eHeader(const st\n+ 0x003efcc8 643a3a73 7472696e 67202620 666e2900 d::string & fn).\n+ 0x003efcd8 766f6964 20486173 68537461 74697374 void HashStatist\n+ 0x003efce8 6963733c 54564841 53485f54 3e3a3a6c ics::l\n+ 0x003efcf8 6f616448 61736853 74617469 73746963 oadHashStatistic\n+ 0x003efd08 7328636f 6e737420 7374643a 3a737472 s(const std::str\n+ 0x003efd18 696e6720 26206669 6c656e61 6d652900 ing & filename).\n+ 0x003efd28 766f6964 20486173 68537461 74697374 void HashStatist\n+ 0x003efd38 6963733c 54564841 53485f54 3e3a3a61 ics::a\n+ 0x003efd48 73736967 6e526561 64426173 65537461 ssignReadBaseSta\n+ 0x003efd58 74697374 6963735f 4d756c74 69546872 tistics_MultiThr\n+ 0x003efd68 65616428 52656164 506f6f6c 20262072 ead(ReadPool & r\n+ 0x003efd78 702c2075 696e7433 32206e75 6d746872 p, uint32 numthr\n+ 0x003efd88 65616473 2c20626f 6f6c206d 61736b6e eads, bool maskn\n+ 0x003efd98 61737479 72657065 6174732c 2075696e astyrepeats, uin\n+ 0x003efda8 74333220 6d696e63 6f756e74 6b6d6572 t32 mincountkmer\n+ 0x003efdb8 666f726b 732c2062 6f6f6c20 6e656564 forks, bool need\n+ 0x003efdc8 66776472 65762900 766f6964 20486173 fwdrev).void Has\n+ 0x003efdd8 68537461 74697374 6963733c 54564841 hStatistics::prepareSt\n+ 0x003efdf8 7265616d 4164644e 65787453 65717565 reamAddNextSeque\n+ 0x003efe08 6e636528 636f6e73 7420766f 6964202a nce(const void *\n+ 0x003efe18 20736571 766f6964 2c207569 6e743634 seqvoid, uint64\n+ 0x003efe28 20736c65 6e2c2063 6f6e7374 20636861 slen, const cha\n+ 0x003efe38 72202a20 6e616d65 7374722c 2075696e r * namestr, uin\n+ 0x003efe48 74382073 65717479 70652c20 626f6f6c t8 seqtype, bool\n+ 0x003efe58 20697372 65766572 73650000 766f6964 isreverse..void\n+ 0x003efe68 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003efe78 54564841 53485f54 3e3a3a70 72657061 TVHASH_T>::prepa\n+ 0x003efe88 72655374 7265616d 48617368 53746174 reStreamHashStat\n+ 0x003efe98 69737469 63732875 696e7433 32206261 istics(uint32 ba\n+ 0x003efea8 73657370 65726861 73682c20 696e7433 sesperhash, int3\n+ 0x003efeb8 32206d65 6d746f75 73652c20 636f6e73 2 memtouse, cons\n+ 0x003efec8 74207374 643a3a73 7472696e 67202620 t std::string & \n+ 0x003efed8 68617368 73746174 66696c65 6e616d65 hashstatfilename\n+ 0x003efee8 2c20636f 6e737420 7374643a 3a737472 , const std::str\n+ 0x003efef8 696e6720 2620746d 70646972 6563746f ing & tmpdirecto\n+ 0x003eff08 72792900 75696e74 36342048 61736853 ry).uint64 HashS\n+ 0x003eff18 74617469 73746963 733c5456 48415348 tatistics::computeHash\n+ 0x003eff38 53746174 69737469 63732863 6f6e7374 Statistics(const\n+ 0x003eff48 20737464 3a3a6c69 73743c73 74643a3a std::list & seqfil\n+ 0x003eff68 65732c20 696e7433 32206d65 6d746f75 es, int32 memtou\n+ 0x003eff78 73652c20 626f6f6c 20667764 616e6472 se, bool fwdandr\n+ 0x003eff88 65762c20 75696e74 33322066 77647265 ev, uint32 fwdre\n+ 0x003eff98 766d696e 2c207569 6e743332 20726172 vmin, uint32 rar\n+ 0x003effa8 656b6d65 72656172 6c796b69 6c6c2c20 ekmerearlykill, \n+ 0x003effb8 75696e74 33322062 61736573 70657268 uint32 basesperh\n+ 0x003effc8 6173682c 20636f6e 73742073 74643a3a ash, const std::\n+ 0x003effd8 73747269 6e672026 20686173 68737461 string & hashsta\n+ 0x003effe8 7466696c 656e616d 652c2063 6f6e7374 tfilename, const\n+ 0x003efff8 20737464 3a3a7374 72696e67 20262064 std::string & d\n+ 0x003f0008 69726563 746f7279 29000000 766f6964 irectory)...void\n+ 0x003f0018 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003f0028 54564841 53485f54 3e3a3a63 6f6d7075 TVHASH_T>::compu\n+ 0x003f0038 74654861 73685374 61746973 74696373 teHashStatistics\n+ 0x003f0048 28526561 64506f6f 6c202620 72702c20 (ReadPool & rp, \n+ 0x003f0058 626f6f6c 20636865 636b7573 6564696e bool checkusedin\n+ 0x003f0068 61737365 6d626c79 2c20626f 6f6c2061 assembly, bool a\n+ 0x003f0078 6c736f72 61696c73 2c20626f 6f6c2066 lsorails, bool f\n+ 0x003f0088 7764616e 64726576 2c207569 6e743332 wdandrev, uint32\n+ 0x003f0098 20667764 7265766d 696e2c20 75696e74 fwdrevmin, uint\n+ 0x003f00a8 33322072 6172656b 6d657265 61726c79 32 rarekmerearly\n+ 0x003f00b8 6b696c6c 2c207569 6e743332 20626173 kill, uint32 bas\n+ 0x003f00c8 65737065 72686173 682c2075 696e7433 esperhash, uint3\n+ 0x003f00d8 32206d69 6c6c696f 6e686173 68657370 2 millionhashesp\n+ 0x003f00e8 65726275 66666572 2c207374 643a3a73 erbuffer, std::s\n+ 0x003f00f8 7472696e 67202620 68617368 73746174 tring & hashstat\n+ 0x003f0108 66696c65 6e616d65 2c20636f 6e737420 filename, const \n+ 0x003f0118 7374643a 3a737472 696e6720 26206469 std::string & di\n+ 0x003f0128 72656374 6f727929 00000000 766f6964 rectory)....void\n+ 0x003f0138 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003f0148 54564841 53485f54 3e3a3a70 7269765f TVHASH_T>::priv_\n+ 0x003f0158 77726974 65486173 68537461 7446696c writeHashStatFil\n+ 0x003f0168 65486561 64657228 677a4669 6c652026 eHeader(gzFile &\n+ 0x003f0178 20677a66 2c207569 6e743332 20626173 gzf, uint32 bas\n+ 0x003f0188 65737065 72686173 682c2075 696e7438 esperhash, uint8\n+ 0x003f0198 20736f72 74737461 7475732c 2075696e sortstatus, uin\n+ 0x003f01a8 74363420 6e756d65 6c656d29 00000000 t64 numelem)....\n+ 0x003f01b8 766f6964 20486173 68537461 74697374 void HashStatist\n+ 0x003f01c8 6963733c 54564841 53485f54 3e3a3a70 ics::p\n+ 0x003f01d8 7269765f 70687343 6f6d6d6f 6e28626f riv_phsCommon(bo\n+ 0x003f01e8 6f6c2061 6c736f73 61766573 696e676c ol alsosavesingl\n+ 0x003f01f8 65686173 6865732c 2075696e 74333220 ehashes, uint32 \n+ 0x003f0208 62617365 73706572 68617368 2c20696e basesperhash, in\n+ 0x003f0218 74333220 6d656761 62797465 73666f72 t32 megabytesfor\n+ 0x003f0228 62756666 65722c20 636f6e73 74207374 buffer, const st\n+ 0x003f0238 643a3a73 7472696e 67202620 746d7064 d::string & tmpd\n+ 0x003f0248 69726563 746f7279 29000000 766f6964 irectory)...void\n+ 0x003f0258 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003f0268 54564841 53485f54 3e3a3a70 7269765f TVHASH_T>::priv_\n+ 0x003f0278 73617665 48617368 56537461 74697374 saveHashVStatist\n+ 0x003f0288 69637328 677a4669 6c652026 20677a66 ics(gzFile & gzf\n+ 0x003f0298 29000000 626f6f6c 20486173 68537461 )...bool HashSta\n+ 0x003f02a8 74697374 6963733c 54564841 53485f54 tistics::priv_dn_TestS\n+ 0x003f02c8 696e676c 65536571 28526561 64202620 ingleSeq(Read & \n+ 0x003f02d8 61637472 6561642c 20737464 3a3a7665 actread, std::ve\n+ 0x003f02e8 63746f72 3c75696e 74383e20 2620646e ctor & dn\n+ 0x003f02f8 5f616c6c 6f772c20 7374643a 3a766563 _allow, std::vec\n+ 0x003f0308 746f723c 73697a65 5f743e20 2620646e tor & dn\n+ 0x003f0318 5f766861 7368696e 64657865 73290000 _vhashindexes)..\n+ 0x003f0328 48617368 53746174 69737469 63733c54 HashStatistics::priv_a\n+ 0x003f0348 72625f44 6f537475 66662852 65616450 rb_DoStuff(ReadP\n+ 0x003f0358 6f6f6c20 26207270 2c207369 7a655f74 ool & rp, size_t\n+ 0x003f0368 20617667 68617368 636f762c 20737464 avghashcov, std\n+ 0x003f0378 3a3a7665 63746f72 3c686173 68737461 ::vector & hashstats\n+ 0x003f0398 2c20636f 6e737420 75696e74 33322062 , const uint32 b\n+ 0x003f03a8 61736573 70657268 6173682c 20737464 asesperhash, std\n+ 0x003f03b8 3a3a7665 63746f72 3c687376 62656e64 ::vector & hsshortc\n+ 0x003f03d8 7574732c 20626f6f 6c206d61 736b6e61 uts, bool maskna\n+ 0x003f03e8 73747972 65706561 74732c20 696e7433 styrepeats, int3\n+ 0x003f03f8 32206672 6f6d6964 2c20696e 74333220 2 fromid, int32 \n+ 0x003f0408 746f6964 2c20626f 6f6c2074 7275656b toid, bool truek\n+ 0x003f0418 6d657266 6f726b73 29000000 766f6964 merforks)...void\n+ 0x003f0428 20486173 68537461 74697374 6963733c HashStatistics<\n+ 0x003f0438 54564841 53485f54 3e3a3a70 7269765f TVHASH_T>::priv_\n+ 0x003f0448 6172625f 74687265 61642875 696e7433 arb_thread(uint3\n+ 0x003f0458 32207468 72656164 6e756d2c 20617262 2 threadnum, arb\n+ 0x003f0468 735f7468 72656164 73686172 65636f6e s_threadsharecon\n+ 0x003f0478 74726f6c 5f74202a 20747363 70747229 trol_t * tscptr)\n+ 0x003f0488 00000000 73697a65 5f742048 61736853 ....size_t HashS\n+ 0x003f0498 74617469 73746963 733c5456 48415348 tatistics::priv_calcMi\n+ 0x003f04b8 64486173 68537461 74496e64 65782863 dHashStatIndex(c\n+ 0x003f04c8 6f6e7374 20737464 3a3a7665 63746f72 onst std::vector\n+ 0x003f04d8 3c686173 68737461 745f743e 20262068 & h\n+ 0x003f04e8 61736873 74617473 2c207369 7a655f74 ashstats, size_t\n+ 0x003f04f8 20646f6e 74636172 65706572 63656e74 dontcarepercent\n+ 0x003f0508 29000000 766f6964 20486173 68537461 )...void HashSta\n+ 0x003f0518 74697374 6963733c 54564841 53485f54 tistics::priv_makeHash\n+ 0x003f0538 53746174 41727261 7953686f 72746375 StatArrayShortcu\n+ 0x003f0548 74732829 00000000 73697a65 5f742048 ts()....size_t H\n+ 0x003f0558 61736853 74617469 73746963 733c5456 ashStatistics::priv_cr\n+ 0x003f0578 65617465 48617368 53746174 69737469 eateHashStatisti\n+ 0x003f0588 63734669 6c652873 74643a3a 73747269 csFile(std::stri\n+ 0x003f0598 6e672026 20686173 68737461 7466696c ng & hashstatfil\n+ 0x003f05a8 656e616d 652c2073 74643a3a 76656374 ename, std::vect\n+ 0x003f05b8 6f723c73 74643a3a 73747269 6e673e20 or \n+ 0x003f05c8 26206861 73686669 6c656e61 6d65732c & hashfilenames,\n+ 0x003f05d8 20737464 3a3a7665 63746f72 3c73697a std::vector & elementsp\n+ 0x003f05f8 65726669 6c652c20 75696e74 33322066 erfile, uint32 f\n+ 0x003f0608 77647265 766d696e 2c20626f 6f6c2061 wdrevmin, bool a\n+ 0x003f0618 6c736f73 61766573 696e676c 65686173 lsosavesinglehas\n+ 0x003f0628 68657329 00000000 73697a65 5f742048 hes)....size_t H\n+ 0x003f0638 61736853 74617469 73746963 733c5456 ashStatistics::priv_wr\n+ 0x003f0658 69746543 6f6d7072 65737365 64484642 iteCompressedHFB\n+ 0x003f0668 2873697a 655f7420 6866696e 6465782c (size_t hfindex,\n+ 0x003f0678 20737464 3a3a7665 63746f72 3c686173 std::vector & hfb, \n+ 0x003f0698 75696e74 33322072 6172656b 6d657265 uint32 rarekmere\n+ 0x003f06a8 61726c79 6b696c6c 2c20677a 46696c65 arlykill, gzFile\n+ 0x003f06b8 20262067 7a662c20 626f6f6c 20666f72 & gzf, bool for\n+ 0x003f06c8 63652900 766f6964 20626f6f 73743a3a ce).void boost::\n+ 0x003f06d8 6d757465 783a3a75 6e6c6f63 6b282900 mutex::unlock().\n+ 0x003f06e8 21706f73 69783a3a 70746872 6561645f !posix::pthread_\n+ 0x003f06f8 6d757465 785f756e 6c6f636b 28266d29 mutex_unlock(&m)\n+ 0x003f0708 00000000 626f6f73 743a3a63 6f6e6469 ....boost::condi\n+ 0x003f0718 74696f6e 5f766172 6961626c 653a3a7e tion_variable::~\n+ 0x003f0728 636f6e64 6974696f 6e5f7661 72696162 condition_variab\n+ 0x003f0738 6c652829 00000000 2f757372 2f696e63 le()..../usr/inc\n+ 0x003f0748 6c756465 2f626f6f 73742f74 68726561 lude/boost/threa\n+ 0x003f0758 642f7074 68726561 642f636f 6e646974 d/pthread/condit\n+ 0x003f0768 696f6e5f 76617269 61626c65 5f667764 ion_variable_fwd\n+ 0x003f0778 2e687070 00000000 21706f73 69783a3a .hpp....!posix::\n+ 0x003f0788 70746872 6561645f 6d757465 785f6465 pthread_mutex_de\n+ 0x003f0798 7374726f 79282669 6e746572 6e616c5f stroy(&internal_\n+ 0x003f07a8 6d757465 78290000 21706f73 69783a3a mutex)..!posix::\n+ 0x003f07b8 70746872 6561645f 636f6e64 5f646573 pthread_cond_des\n+ 0x003f07c8 74726f79 2826636f 6e642900 54686973 troy(&cond).This\n+ 0x003f07d8 20686173 68207361 76652073 686f756c hash save shoul\n+ 0x003f07e8 64206e6f 74206265 2063616c 6c656420 d not be called \n+ 0x003f07f8 616e796d 6f72652c 2061626f 7274696e anymore, abortin\n+ 0x003f0808 672e0a00 68617368 3a200000 66636f75 g...hash: ..fcou\n+ 0x003f0818 6e743a20 00000000 0972636f 756e743a nt: .....rcount:\n+ 0x003f0828 20000000 096c6f77 706f7364 343a2000 ....lowposd4: .\n+ 0x003f0838 09736571 74797065 3a200000 096b6d66 .seqtype: ...kmf\n+ 0x003f0848 3a200000 206b6d72 3a200000 2066723a : .. kmr: .. fr:\n+ 0x003f0858 20000000 626f6f73 743a3a63 6f6e6469 ...boost::condi\n+ 0x003f0868 74696f6e 5f766172 6961626c 653a3a63 tion_variable::c\n+ 0x003f0878 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n+ 0x003f0888 65282920 636f6e73 74727563 746f7220 e() constructor \n+ 0x003f0898 6661696c 65642069 6e207074 68726561 failed in pthrea\n+ 0x003f08a8 645f6d75 7465785f 696e6974 00000000 d_mutex_init....\n+ 0x003f08b8 696e7420 626f6f73 743a3a70 6f736978 int boost::posix\n+ 0x003f08c8 3a3a7074 68726561 645f636f 6e645f69 ::pthread_cond_i\n+ 0x003f08d8 6e697428 70746872 6561645f 636f6e64 nit(pthread_cond\n+ 0x003f08e8 5f742a29 00000000 2f757372 2f696e63 _t*)..../usr/inc\n+ 0x003f08f8 6c756465 2f626f6f 73742f74 68726561 lude/boost/threa\n+ 0x003f0908 642f7074 68726561 642f7074 68726561 d/pthread/pthrea\n+ 0x003f0918 645f6865 6c706572 732e6870 70000000 d_helpers.hpp...\n+ 0x003f0928 21707468 72656164 5f636f6e 64617474 !pthread_condatt\n+ 0x003f0938 725f7365 74636c6f 636b2826 61747472 r_setclock(&attr\n+ 0x003f0948 2c203129 00000000 21707468 72656164 , 1)....!pthread\n+ 0x003f0958 5f636f6e 64617474 725f6465 7374726f _condattr_destro\n+ 0x003f0968 79282661 74747229 00000000 626f6f73 y(&attr)....boos\n+ 0x003f0978 743a3a63 6f6e6469 74696f6e 5f766172 t::condition_var\n+ 0x003f0988 6961626c 653a3a63 6f6e6469 74696f6e iable::condition\n+ 0x003f0998 5f766172 6961626c 65282900 626f6f73 _variable().boos\n+ 0x003f09a8 743a3a63 6f6e6469 74696f6e 5f766172 t::condition_var\n+ 0x003f09b8 6961626c 653a3a63 6f6e6469 74696f6e iable::condition\n+ 0x003f09c8 5f766172 6961626c 65282920 636f6e73 _variable() cons\n+ 0x003f09d8 74727563 746f7220 6661696c 65642069 tructor failed i\n+ 0x003f09e8 6e207074 68726561 645f636f 6e645f69 n pthread_cond_i\n+ 0x003f09f8 6e697400 626f6f73 743a206d 75746578 nit.boost: mutex\n+ 0x003f0a08 206c6f63 6b206661 696c6564 20696e20 lock failed in \n+ 0x003f0a18 70746872 6561645f 6d757465 785f6c6f pthread_mutex_lo\n+ 0x003f0a28 636b0000 626f6f73 743a3a64 65746169 ck..boost::detai\n+ 0x003f0a38 6c3a3a69 6e746572 72757074 696f6e5f l::interruption_\n+ 0x003f0a48 63686563 6b65723a 3a696e74 65727275 checker::interru\n+ 0x003f0a58 7074696f 6e5f6368 65636b65 72287074 ption_checker(pt\n+ 0x003f0a68 68726561 645f6d75 7465785f 742a2c20 hread_mutex_t*, \n+ 0x003f0a78 70746872 6561645f 636f6e64 5f742a29 pthread_cond_t*)\n+ 0x003f0a88 00000000 2f757372 2f696e63 6c756465 ..../usr/include\n+ 0x003f0a98 2f626f6f 73742f74 68726561 642f7074 /boost/thread/pt\n+ 0x003f0aa8 68726561 642f7468 72656164 5f646174 hread/thread_dat\n+ 0x003f0ab8 612e6870 70000000 21706f73 69783a3a a.hpp...!posix::\n+ 0x003f0ac8 70746872 6561645f 6d757465 785f6c6f pthread_mutex_lo\n+ 0x003f0ad8 636b286d 29000000 766f6964 20626f6f ck(m)...void boo\n+ 0x003f0ae8 73743a3a 73686172 65645f6d 75746578 st::shared_mutex\n+ 0x003f0af8 3a3a7374 6174655f 64617461 3a3a6173 ::state_data::as\n+ 0x003f0b08 73657274 5f6c6f63 6b656428 2920636f sert_locked() co\n+ 0x003f0b18 6e737400 2f757372 2f696e63 6c756465 nst./usr/include\n+ 0x003f0b28 2f626f6f 73742f74 68726561 642f7074 /boost/thread/pt\n+ 0x003f0b38 68726561 642f7368 61726564 5f6d7574 hread/shared_mut\n+ 0x003f0b48 65782e68 70700000 6578636c 75736976 ex.hpp..exclusiv\n+ 0x003f0b58 65000000 73686172 65645f63 6f756e74 e...shared_count\n+ 0x003f0b68 3d3d3000 21207570 67726164 65000000 ==0.! upgrade...\n+ 0x003f0b78 626f6f73 743a3a70 74687265 61643a3a boost::pthread::\n+ 0x003f0b88 70746872 6561645f 6d757465 785f7363 pthread_mutex_sc\n+ 0x003f0b98 6f706564 5f6c6f63 6b3a3a70 74687265 oped_lock::pthre\n+ 0x003f0ba8 61645f6d 75746578 5f73636f 7065645f ad_mutex_scoped_\n+ 0x003f0bb8 6c6f636b 28707468 72656164 5f6d7574 lock(pthread_mut\n+ 0x003f0bc8 65785f74 2a290000 2f757372 2f696e63 ex_t*)../usr/inc\n+ 0x003f0bd8 6c756465 2f626f6f 73742f74 68726561 lude/boost/threa\n+ 0x003f0be8 642f7074 68726561 642f7074 68726561 d/pthread/pthrea\n+ 0x003f0bf8 645f6d75 7465785f 73636f70 65645f6c d_mutex_scoped_l\n+ 0x003f0c08 6f636b2e 68707000 766f6964 20626f6f ock.hpp.void boo\n+ 0x003f0c18 73743a3a 636f6e64 6974696f 6e5f7661 st::condition_va\n+ 0x003f0c28 72696162 6c653a3a 6e6f7469 66795f6f riable::notify_o\n+ 0x003f0c38 6e652829 00000000 2f757372 2f696e63 ne()..../usr/inc\n+ 0x003f0c48 6c756465 2f626f6f 73742f74 68726561 lude/boost/threa\n+ 0x003f0c58 642f7074 68726561 642f636f 6e646974 d/pthread/condit\n+ 0x003f0c68 696f6e5f 76617269 61626c65 2e687070 ion_variable.hpp\n+ 0x003f0c78 00000000 21706f73 69783a3a 70746872 ....!posix::pthr\n+ 0x003f0c88 6561645f 636f6e64 5f736967 6e616c28 ead_cond_signal(\n+ 0x003f0c98 26636f6e 64290000 766f6964 20626f6f &cond)..void boo\n+ 0x003f0ca8 73743a3a 70746872 6561643a 3a707468 st::pthread::pth\n+ 0x003f0cb8 72656164 5f6d7574 65785f73 636f7065 read_mutex_scope\n+ 0x003f0cc8 645f6c6f 636b3a3a 756e6c6f 636b2829 d_lock::unlock()\n+ 0x003f0cd8 00000000 766f6964 20626f6f 73743a3a ....void boost::\n+ 0x003f0ce8 636f6e64 6974696f 6e5f7661 72696162 condition_variab\n+ 0x003f0cf8 6c653a3a 6e6f7469 66795f61 6c6c2829 le::notify_all()\n+ 0x003f0d08 00000000 21706f73 69783a3a 70746872 ....!posix::pthr\n+ 0x003f0d18 6561645f 636f6e64 5f62726f 61646361 ead_cond_broadca\n+ 0x003f0d28 73742826 636f6e64 29000000 766f6964 st(&cond)...void\n+ 0x003f0d38 20626f6f 73743a3a 73686172 65645f6d boost::shared_m\n+ 0x003f0d48 75746578 3a3a7374 6174655f 64617461 utex::state_data\n+ 0x003f0d58 3a3a6173 73657274 5f6c6f63 6b5f7368 ::assert_lock_sh\n+ 0x003f0d68 61726564 28292063 6f6e7374 00000000 ared() const....\n+ 0x003f0d78 21206578 636c7573 69766500 73686172 ! exclusive.shar\n+ 0x003f0d88 65645f63 6f756e74 3e300000 68617374 ed_count>0..hast\n+ 0x003f0d98 73746174 20617272 6179206e 6f742073 stat array not s\n+ 0x003f0da8 6f727465 64206279 20636f75 6e743f3f orted by count??\n+ 0x003f0db8 3f000000 436f756c 64206e6f 74207772 ?...Could not wr\n+ 0x003f0dc8 69746520 68656164 65722069 6e666f72 ite header infor\n+ 0x003f0dd8 6d617469 6f6e2e20 49732074 68652064 mation. Is the d\n+ 0x003f0de8 69736b20 66756c6c 206f7220 71756f74 isk full or quot\n+ 0x003f0df8 61207265 61636865 643f2043 68616e67 a reached? Chang\n+ 0x003f0e08 65642061 63636573 73207065 726d6973 ed access permis\n+ 0x003f0e18 73696f6e 733f0a00 436f756c 64206e6f sions?..Could no\n+ 0x003f0e28 74207361 76652061 6e796d6f 72652074 t save anymore t\n+ 0x003f0e38 68652068 61736820 73746174 69737469 he hash statisti\n+ 0x003f0e48 63732028 31292e20 4469736b 2066756c cs (1). Disk ful\n+ 0x003f0e58 6c3f2043 68616e67 65642070 65726d69 l? Changed permi\n+ 0x003f0e68 7373696f 6e733f00 4e6f206d 61676963 ssions?.No magic\n+ 0x003f0e78 20666f75 6e64206f 72207472 756e6361 found or trunca\n+ 0x003f0e88 7465643f 0a000000 4e6f7420 656e6f75 ted?....Not enou\n+ 0x003f0e98 67682062 79746573 20726561 6420666f gh bytes read fo\n+ 0x003f0ea8 72206865 61646572 20696e66 6f726d61 r header informa\n+ 0x003f0eb8 74696f6e 2e204669 6c652074 72756e63 tion. File trunc\n+ 0x003f0ec8 61746564 3f0a0000 54686520 66696c65 ated?...The file\n+ 0x003f0ed8 206c6f6f 6b732074 6f206265 2061204d looks to be a M\n+ 0x003f0ee8 49524120 48617368 53746174 69737469 IRA HashStatisti\n+ 0x003f0ef8 63732066 696c652c 20627574 20766572 cs file, but ver\n+ 0x003f0f08 73696f6e 20000000 20616e64 206e6f74 sion ... and not\n+ 0x003f0f18 20333f0a 00000000 72620000 436f756c 3?.....rb..Coul\n+ 0x003f0f28 64206e6f 74206f70 656e2000 2c206973 d not open ., is\n+ 0x003f0f38 20697420 70726573 656e743f 20417265 it present? Are\n+ 0x003f0f48 20706572 6d697373 696f6e73 20736574 permissions set\n+ 0x003f0f58 20726967 68743f00 4572726f 72207768 right?.Error wh\n+ 0x003f0f68 696c6520 6c6f6164 696e6720 66696c65 ile loading file\n+ 0x003f0f78 20000000 77623100 4572726f 7220666f ...wb1.Error fo\n+ 0x003f0f88 72206669 6c652000 6e6f2073 686f7274 r file .no short\n+ 0x003f0f98 63757473 206d6164 652c206e 6f742072 cuts made, not r\n+ 0x003f0fa8 65616479 20666f72 20736561 72636869 eady for searchi\n+ 0x003f0fb8 6e673f00 626f6f73 7420756e 69717565 ng?.boost unique\n+ 0x003f0fc8 5f6c6f63 6b206861 73206e6f 206d7574 _lock has no mut\n+ 0x003f0fd8 65780000 626f6f73 7420756e 69717565 ex..boost unique\n+ 0x003f0fe8 5f6c6f63 6b206f77 6e732061 6c726561 _lock owns alrea\n+ 0x003f0ff8 64792074 6865206d 75746578 00000000 dy the mutex....\n+ 0x003f1008 626f6f73 7420756e 69717565 5f6c6f63 boost unique_loc\n+ 0x003f1018 6b20646f 65736e27 74206f77 6e207468 k doesn't own th\n+ 0x003f1028 65206d75 74657800 626f6f73 743a3a63 e mutex.boost::c\n+ 0x003f1038 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n+ 0x003f1048 653a3a77 61697420 6661696c 65642069 e::wait failed i\n+ 0x003f1058 6e207074 68726561 645f636f 6e645f77 n pthread_cond_w\n+ 0x003f1068 61697400 626f6f73 74207468 72656164 ait.boost thread\n+ 0x003f1078 3a207472 79696e67 206a6f69 6e696e67 : trying joining\n+ 0x003f1088 20697473 656c6600 48617368 2073697a itself.Hash siz\n+ 0x003f1098 65200000 20646f65 73206e6f 74206669 e .. does not fi\n+ 0x003f10a8 7420696e 746f2063 75727265 6e746c79 t into currently\n+ 0x003f10b8 20757365 64206861 73682000 43757272 used hash .Curr\n+ 0x003f10c8 656e7420 68617368 73746174 206b6d65 ent hashstat kme\n+ 0x003f10d8 72207369 7a652069 73200000 2c206275 r size is .., bu\n+ 0x003f10e8 74206b6d 65722073 697a6520 696e2064 t kmer size in d\n+ 0x003f10f8 61746120 746f206c 6f616420 69732000 ata to load is .\n+ 0x003f1108 203f3f3f 0a000000 41707065 6e64696e ???....Appendin\n+ 0x003f1118 6720746f 20657869 7374696e 67206861 g to existing ha\n+ 0x003f1128 73687374 6174206e 6f742069 6d706c65 shstat not imple\n+ 0x003f1138 6d656e74 65642079 65740a00 45787065 mented yet..Expe\n+ 0x003f1148 63746564 20746f20 72656164 20000000 cted to read ...\n+ 0x003f1158 20627974 65732c20 62757420 676f7420 bytes, but got \n+ 0x003f1168 00000000 68737368 6f727463 7574732e ....hsshortcuts.\n+ 0x003f1178 656d7074 79282920 3f3f3f20 61742000 empty() ??? at .\n+ 0x003f1188 626f6f73 743a3a62 61736963 5f666f72 boost::basic_for\n+ 0x003f1198 6d61743c 43682c20 54722c20 416c6c6f mat::string_type \n+ 0x003f11b8 626f6f73 743a3a62 61736963 5f666f72 boost::basic_for\n+ 0x003f11c8 6d61743c 43682c20 54722c20 416c6c6f mat::str() const \n+ 0x003f11e8 5b776974 68204368 203d2063 6861723b [with Ch = char;\n+ 0x003f11f8 20547220 3d207374 643a3a63 6861725f Tr = std::char_\n+ 0x003f1208 74726169 74733c63 6861723e 3b20416c traits; Al\n+ 0x003f1218 6c6f6320 3d207374 643a3a61 6c6c6f63 loc = std::alloc\n+ 0x003f1228 61746f72 3c636861 723e3b20 626f6f73 ator; boos\n+ 0x003f1238 743a3a62 61736963 5f666f72 6d61743c t::basic_format<\n+ 0x003f1248 43682c20 54722c20 416c6c6f 633e3a3a Ch, Tr, Alloc>::\n+ 0x003f1258 73747269 6e675f74 79706520 3d207374 string_type = st\n+ 0x003f1268 643a3a5f 5f637878 31313a3a 62617369 d::__cxx11::basi\n+ 0x003f1278 635f7374 72696e67 3c636861 723e5d00 c_string].\n+ 0x003f1288 2f757372 2f696e63 6c756465 2f626f6f /usr/include/boo\n+ 0x003f1298 73742f66 6f726d61 742f666f 726d6174 st/format/format\n+ 0x003f12a8 5f696d70 6c656d65 6e746174 696f6e2e _implementation.\n+ 0x003f12b8 68707000 6974656d 2e706164 5f736368 hpp.item.pad_sch\n+ 0x003f12c8 656d655f 20262066 6f726d61 745f6974 eme_ & format_it\n+ 0x003f12d8 656d5f74 3a3a7461 62756c61 74696f6e em_t::tabulation\n+ 0x003f12e8 00000000 4b6d6572 20737461 74697374 ....Kmer statist\n+ 0x003f12f8 6963733a 0a000000 3d3d3d3d 3d3d3d3d ics:....========\n 0x003f1308 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x003f1318 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x003f1328 3d3d3d3d 3d0a0000 5573696e 67206b6d =====...Using km\n- 0x003f1338 65727320 6f662073 697a653a 20000000 ers of size: ...\n- 0x003f1348 4d656173 75726564 20617667 2e207261 Measured avg. ra\n- 0x003f1358 77206672 65717565 6e637920 636f7665 w frequency cove\n- 0x003f1368 72616765 3a200000 436f7272 65637465 rage: ..Correcte\n- 0x003f1378 64206176 672e2072 61772066 72657175 d avg. raw frequ\n- 0x003f1388 656e6379 20636f76 65726167 653a2000 ency coverage: .\n- 0x003f1398 09534b45 57454420 44495354 52494255 .SKEWED DISTRIBU\n- 0x003f13a8 54494f4e 21000000 466f7263 6564206d TION!...Forced m\n- 0x003f13b8 696e696d 756d2061 76657261 67652066 inimum average f\n- 0x003f13c8 72657175 656e6379 3a200000 0a46696e requency: ...Fin\n- 0x003f13d8 616c2061 76657261 67652066 72657175 al average frequ\n- 0x003f13e8 656e6379 3a200000 0a446564 75636564 ency: ...Deduced\n- 0x003f13f8 20746872 6573686f 6c64733a 0a000000 thresholds:....\n- 0x003f1408 0a526172 65206672 65713a20 00000000 .Rare freq: ....\n- 0x003f1418 0a4d696e 206e6f72 6d616c20 66726571 .Min normal freq\n- 0x003f1428 3a200000 0a4d6178 206e6f72 6d616c20 : ...Max normal \n- 0x003f1438 66726571 20000000 0a526570 65617420 freq ....Repeat \n- 0x003f1448 66726571 3a200000 0a486561 76792066 freq: ...Heavy f\n- 0x003f1458 7265713a 20000000 0a437261 7a792066 req: ....Crazy f\n- 0x003f1468 7265713a 20000000 0a4d6173 6b206672 req: ....Mask fr\n- 0x003f1478 65713a20 00000000 0a0a5265 70656174 eq: ......Repeat\n- 0x003f1488 20726174 696f2068 6973746f 6772616d ratio histogram\n- 0x003f1498 3a0a0000 2d2d2d2d 2d2d2d2d 2d2d2d2d :...------------\n- 0x003f14a8 2d2d2d2d 2d2d2d2d 2d2d2d00 3d3d3d3d -----------.====\n- 0x003f14b8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003f1328 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003f1338 3d0a0000 5573696e 67206b6d 65727320 =...Using kmers \n+ 0x003f1348 6f662073 697a653a 20000000 4d656173 of size: ...Meas\n+ 0x003f1358 75726564 20617667 2e207261 77206672 ured avg. raw fr\n+ 0x003f1368 65717565 6e637920 636f7665 72616765 equency coverage\n+ 0x003f1378 3a200000 436f7272 65637465 64206176 : ..Corrected av\n+ 0x003f1388 672e2072 61772066 72657175 656e6379 g. raw frequency\n+ 0x003f1398 20636f76 65726167 653a2000 09534b45 coverage: ..SKE\n+ 0x003f13a8 57454420 44495354 52494255 54494f4e WED DISTRIBUTION\n+ 0x003f13b8 21000000 466f7263 6564206d 696e696d !...Forced minim\n+ 0x003f13c8 756d2061 76657261 67652066 72657175 um average frequ\n+ 0x003f13d8 656e6379 3a200000 0a46696e 616c2061 ency: ...Final a\n+ 0x003f13e8 76657261 67652066 72657175 656e6379 verage frequency\n+ 0x003f13f8 3a200000 0a446564 75636564 20746872 : ...Deduced thr\n+ 0x003f1408 6573686f 6c64733a 0a000000 0a526172 esholds:.....Rar\n+ 0x003f1418 65206672 65713a20 00000000 0a4d696e e freq: .....Min\n+ 0x003f1428 206e6f72 6d616c20 66726571 3a200000 normal freq: ..\n+ 0x003f1438 0a4d6178 206e6f72 6d616c20 66726571 .Max normal freq\n+ 0x003f1448 20000000 0a526570 65617420 66726571 ....Repeat freq\n+ 0x003f1458 3a200000 0a486561 76792066 7265713a : ...Heavy freq:\n+ 0x003f1468 20000000 0a437261 7a792066 7265713a ....Crazy freq:\n+ 0x003f1478 20000000 0a4d6173 6b206672 65713a20 ....Mask freq: \n+ 0x003f1488 00000000 0a0a5265 70656174 20726174 ......Repeat rat\n+ 0x003f1498 696f2068 6973746f 6772616d 3a0a0000 io histogram:...\n+ 0x003f14a8 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n+ 0x003f14b8 2d2d2d2d 2d2d2d00 3d3d3d3d 3d3d3d3d -------.========\n 0x003f14c8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x003f14d8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x003f14e8 3d3d3d3d 3d0a0a00 76656374 6f723c62 =====...vector::_M_fill_in\n- 0x003f1508 73657274 00000000 766f6964 20626f6f sert....void boo\n- 0x003f1518 73743a3a 696f3a3a 64657461 696c3a3a st::io::detail::\n- 0x003f1528 70757428 542c2063 6f6e7374 20626f6f put(T, const boo\n- 0x003f1538 73743a3a 696f3a3a 64657461 696c3a3a st::io::detail::\n- 0x003f1548 666f726d 61745f69 74656d3c 43682c20 format_item&, typ\n- 0x003f1568 656e616d 6520626f 6f73743a 3a626173 ename boost::bas\n- 0x003f1578 69635f66 6f726d61 743c4368 2c205472 ic_format::string\n- 0x003f1598 5f747970 65262c20 74797065 6e616d65 _type&, typename\n- 0x003f15a8 20626f6f 73743a3a 62617369 635f666f boost::basic_fo\n- 0x003f15b8 726d6174 3c43682c 2054722c 20416c6c rmat::internal_st\n- 0x003f15d8 7265616d 6275665f 74262c20 626f6f73 reambuf_t&, boos\n- 0x003f15e8 743a3a69 6f3a3a64 65746169 6c3a3a6c t::io::detail::l\n- 0x003f15f8 6f63616c 655f742a 29205b77 69746820 ocale_t*) [with \n- 0x003f1608 4368203d 20636861 723b2054 72203d20 Ch = char; Tr = \n- 0x003f1618 7374643a 3a636861 725f7472 61697473 std::char_traits\n- 0x003f1628 3c636861 723e3b20 416c6c6f 63203d20 ; Alloc = \n- 0x003f1638 7374643a 3a616c6c 6f636174 6f723c63 std::allocator; T = const \n- 0x003f1658 626f6f73 743a3a69 6f3a3a64 65746169 boost::io::detai\n- 0x003f1668 6c3a3a70 75745f68 6f6c6465 723c6368 l::put_holder >&; t\n- 0x003f1698 7970656e 616d6520 626f6f73 743a3a62 ypename boost::b\n- 0x003f16a8 61736963 5f666f72 6d61743c 43682c20 asic_format::stri\n- 0x003f16c8 6e675f74 79706520 3d207374 643a3a5f ng_type = std::_\n- 0x003f16d8 5f637878 31313a3a 62617369 635f7374 _cxx11::basic_st\n- 0x003f16e8 72696e67 3c636861 723e3b20 74797065 ring; type\n- 0x003f16f8 6e616d65 20626f6f 73743a3a 62617369 name boost::basi\n- 0x003f1708 635f666f 726d6174 3c43682c 2054722c c_format::interna\n- 0x003f1728 6c5f7374 7265616d 6275665f 74203d20 l_streambuf_t = \n- 0x003f1738 626f6f73 743a3a69 6f3a3a62 61736963 boost::io::basic\n- 0x003f1748 5f616c74 73747269 6e676275 663c6368 _altstringbuf, std:\n- 0x003f1778 3a616c6c 6f636174 6f723c63 6861723e :allocator\n- 0x003f1788 203e3b20 626f6f73 743a3a69 6f3a3a64 >; boost::io::d\n- 0x003f1798 65746169 6c3a3a6c 6f63616c 655f7420 etail::locale_t \n- 0x003f17a8 3d207374 643a3a6c 6f63616c 655d0000 = std::locale]..\n- 0x003f17b8 2f757372 2f696e63 6c756465 2f626f6f /usr/include/boo\n- 0x003f17c8 73742f66 6f726d61 742f6665 65645f61 st/format/feed_a\n- 0x003f17d8 7267732e 68707000 643e3000 7265732e rgs.hpp.d>0.res.\n- 0x003f17e8 73697a65 2829203d 3d207374 61746963 size() == static\n- 0x003f17f8 5f636173 743c7369 7a655f74 7970653e _cast\n- 0x003f1808 28772900 62617365 73706572 68617368 (w).basesperhash\n- 0x003f1818 203d3d20 30203f3f 3f000000 75707065 == 0 ???...uppe\n- 0x003f1828 72626173 65732028 00000000 29203e3d rbases (....) >=\n- 0x003f1838 62617365 73706572 68617368 20000000 basesperhash ...\n- 0x003f1848 68617368 73746174 5f743a20 00000000 hashstat_t: ....\n- 0x003f1858 66726565 6d656d3a 20000000 4b656570 freemem: ...Keep\n- 0x003f1868 20667265 650a0000 50657263 656e7461 free...Percenta\n- 0x003f1878 67650a00 6d626662 313a2000 6d626662 ge..mbfb1: .mbfb\n- 0x003f1888 323a2000 544e483a 20000000 584d4520 2: .TNH: ...XME \n- 0x003f1898 313a2000 584d4520 323a2000 48535f6e 1: .XME 2: .HS_n\n- 0x003f18a8 6570623a 20000000 2f737461 74746d70 epb: .../stattmp\n- 0x003f18b8 00000000 2e62696e 2e677a00 20666f72 .....bin.gz. for\n- 0x003f18c8 2074656d 706f7261 72792073 74617420 temporary stat \n- 0x003f18d8 66696c65 206f7574 7075743f 20446973 file output? Dis\n- 0x003f18e8 6b206675 6c6c3f20 57726f6e 67207061 k full? Wrong pa\n- 0x003f18f8 74683f20 41636365 73732070 65726d69 th? Access permi\n- 0x003f1908 7373696f 6e733f00 48535f68 61736873 ssions?.HS_hashs\n- 0x003f1918 74617466 696c656e 616d652e 656d7074 tatfilename.empt\n- 0x003f1928 79282920 3f3f3f00 736f7274 4c6f7732 y() ???.sortLow2\n- 0x003f1938 34426974 00000000 48535f68 735f6261 4Bit....HS_hs_ba\n- 0x003f1948 73657370 65726861 7368203d 3d203020 sesperhash == 0 \n- 0x003f1958 3f3f3f00 6e6f2073 686f7274 63757473 ???.no shortcuts\n- 0x003f1968 206d6164 65202e2e 2e20656d 70747920 made ... empty \n- 0x003f1978 68617368 73746174 733f0000 6873612e hashstats?..hsa.\n- 0x003f1988 48535f68 735f6261 73657370 65726861 HS_hs_basesperha\n- 0x003f1998 73682000 20213d20 6873622e 48535f68 sh . != hsb.HS_h\n- 0x003f19a8 735f6261 73657370 65726861 73682000 s_basesperhash .\n- 0x003f19b8 736f7274 4c657869 636f6772 61706869 sortLexicographi\n- 0x003f19c8 63616c6c 79557000 736f7274 4279436f callyUp.sortByCo\n- 0x003f19d8 756e7455 70000000 52617720 4d48493a untUp...Raw MHI:\n- 0x003f19e8 20000000 52617720 6176672e 20667265 ...Raw avg. fre\n- 0x003f19f8 712e203a 20000000 48535320 00000000 q. : ...HSS ....\n- 0x003f1a08 09485353 543a2000 436f7272 65637465 .HSST: .Correcte\n- 0x003f1a18 64206176 672e2066 7265712e 203a2000 d avg. freq. : .\n- 0x003f1a28 466f7263 65642061 76672e20 66726571 Forced avg. freq\n- 0x003f1a38 3a200000 436f7272 65637465 64204d48 : ..Corrected MH\n- 0x003f1a48 493a2000 736f7274 4279436f 756e7444 I: .sortByCountD\n- 0x003f1a58 6f776e00 736f7274 4c657842 79436f75 own.sortLexByCou\n- 0x003f1a68 6e740000 436f756c 64206e6f 74207772 nt..Could not wr\n- 0x003f1a78 69746520 616e796d 6f726520 746f2068 ite anymore to h\n- 0x003f1a88 61736820 66696c65 2e204469 736b2066 ash file. Disk f\n- 0x003f1a98 756c6c3f 20436861 6e676564 20706572 ull? Changed per\n- 0x003f1aa8 6d697373 696f6e73 3f000000 68617368 missions?...hash\n- 0x003f1ab8 66696c65 73696e64 65783e3d 48535f68 filesindex>=HS_h\n- 0x003f1ac8 61736866 696c6573 2e73697a 65282920 ashfiles.size() \n- 0x003f1ad8 3f3f3f00 646f6e65 0a000000 68617368 ???.done....hash\n- 0x003f1ae8 73746174 66696c65 6e616d65 2e656d70 statfilename.emp\n- 0x003f1af8 74792829 203f3f3f 00000000 4d617820 ty() ???....Max \n- 0x003f1b08 656c656d 656e7473 20706572 2066696c elements per fil\n- 0x003f1b18 653a2000 20666f72 20777269 74696e67 e: . for writing\n- 0x003f1b28 2c206973 20746865 20646973 6b206675 , is the disk fu\n- 0x003f1b38 6c6c3f20 41726520 7065726d 69737369 ll? Are permissi\n- 0x003f1b48 6f6e7320 73657420 72696768 743f0000 ons set right?..\n- 0x003f1b58 4c6f6164 696e6720 00000000 656c656d Loading ....elem\n- 0x003f1b68 656e7473 20696e20 66696c65 3a200000 ents in file: ..\n- 0x003f1b78 20666f72 20726561 64696e67 3f204974 for reading? It\n- 0x003f1b88 20776173 20777269 7474656e 206a7573 was written jus\n- 0x003f1b98 74206d6f 6d656e74 73206167 6f2c2073 t moments ago, s\n- 0x003f1ba8 6f6d6574 68696e67 20776974 6820796f omething with yo\n- 0x003f1bb8 7572206d 61636869 6e652069 73206272 ur machine is br\n- 0x003f1bc8 6f6b656e 20492074 68696e6b 2e000000 oken I think....\n- 0x003f1bd8 20627974 65732069 6e206669 6c652000 bytes in file .\n- 0x003f1be8 20627574 20726561 64200000 2e205761 but read ... Wa\n- 0x003f1bf8 73207468 65206669 6c652064 656c6574 s the file delet\n- 0x003f1c08 65643f20 4469736b 2066756c 6c3f0000 ed? Disk full?..\n- 0x003f1c18 61667465 7220636f 6d703a20 00000000 after comp: ....\n- 0x003f1c28 6f70656e 696e6720 677a0000 20666f72 opening gz.. for\n- 0x003f1c38 20726561 64696e67 20616c74 686f7567 reading althoug\n- 0x003f1c48 68206974 20776173 20777269 7474656e h it was written\n- 0x003f1c58 206a7573 74206d6f 6d656e74 73206167 just moments ag\n- 0x003f1c68 6f3f3f3f 20536f6d 65746869 6e677320 o??? Somethings \n- 0x003f1c78 69732062 726f6b65 6e206f6e 20796f75 is broken on you\n- 0x003f1c88 72206d61 6368696e 652e0000 6c6f6164 r machine...load\n- 0x003f1c98 696e6720 68656164 65720000 6c6f6164 ing header..load\n- 0x003f1ca8 696e6720 6d61696e 20737461 74697374 ing main statist\n- 0x003f1cb8 69637300 736f6d65 20737461 74697374 ics.some statist\n- 0x003f1cc8 69637300 736f7274 206c6f77 32340000 ics.sort low24..\n- 0x003f1cd8 73617665 20737461 74697374 69637300 save statistics.\n- 0x003f1ce8 466c7573 68696e67 20627566 66657273 Flushing buffers\n- 0x003f1cf8 20746f20 6469736b 3a000000 0a416e61 to disk:....Ana\n- 0x003f1d08 6c797369 6e672068 73746174 2066696c lysing hstat fil\n- 0x003f1d18 65733a0a 00000000 636c6561 6e207570 es:.....clean up\n- 0x003f1d28 2074656d 706f7261 72792073 74617420 temporary stat \n- 0x003f1d38 66696c65 732e2e2e 00000000 57726974 files.......Writ\n- 0x003f1d48 696e6720 74656d70 6f726172 79206873 ing temporary hs\n- 0x003f1d58 74617420 66696c65 733a0a00 2f6d6972 tat files:../mir\n- 0x003f1d68 616b6d63 5f000000 436f756c 64206e6f akmc_...Could no\n- 0x003f1d78 74206372 65617465 206e616d 6520666f t create name fo\n- 0x003f1d88 72207465 6d706f72 61727920 64697265 r temporary dire\n- 0x003f1d98 63746f72 79203f3f 3f000000 436f756c ctory ???...Coul\n- 0x003f1da8 64206e6f 74206372 65617465 2074656d d not create tem\n- 0x003f1db8 706f7261 72792064 69726563 746f7279 porary directory\n- 0x003f1dc8 20270000 273f2043 6865636b 20777269 '..'? Check wri\n- 0x003f1dd8 74652070 65726d69 7373696f 6e732e00 te permissions..\n- 0x003f1de8 2f6d6972 616b6d63 2e6d6873 2e677a00 /mirakmc.mhs.gz.\n- 0x003f1df8 4c6f6164 696e6720 62616974 73206672 Loading baits fr\n- 0x003f1e08 6f6d2000 736f7274 4d61736b 55700000 om .sortMaskUp..\n- 0x003f1e18 72657620 00000000 66776420 00000000 rev ....fwd ....\n- 0x003f1e28 54726965 6420746f 20617373 69676e20 Tried to assign \n- 0x003f1e38 62617365 20737461 74697374 69637320 base statistics \n- 0x003f1e48 28312920 74686f75 67682074 68657265 (1) though there\n- 0x003f1e58 20617265 206e6f20 73746174 69737469 are no statisti\n- 0x003f1e68 63732077 68696368 2063616e 20626520 cs which can be \n- 0x003f1e78 61737369 676e6564 3f20536f 6d657468 assigned? Someth\n- 0x003f1e88 696e6727 73207772 6f6e6720 77697468 ing's wrong with\n- 0x003f1e98 20796f75 72206461 74612073 65742e00 your data set..\n- 0x003f1ea8 626f6f73 743a3a74 68726561 645f7265 boost::thread_re\n- 0x003f1eb8 736f7572 63655f65 72726f72 00000000 source_error....\n- 0x003f1ec8 4e35626f 6f737431 36626173 655f6672 N5boost16base_fr\n- 0x003f1ed8 6f6d5f6d 656d6265 72494e53 5f313073 om_memberINS_10s\n- 0x003f1ee8 68617265 645f7074 72494e53 5f32696f hared_ptrINS_2io\n- 0x003f1ef8 31386261 7369635f 616c7473 7472696e 18basic_altstrin\n- 0x003f1f08 67627566 49635374 31316368 61725f74 gbufIcSt11char_t\n- 0x003f1f18 72616974 73496345 53614963 45454545 raitsIcESaIcEEEE\n- 0x003f1f28 454c6930 45454500 4e35626f 6f737432 ELi0EEE.N5boost2\n- 0x003f1f38 696f3232 62617369 635f6f61 6c747374 io22basic_oaltst\n- 0x003f1f48 72696e67 73747265 616d4963 53743131 ringstreamIcSt11\n- 0x003f1f58 63686172 5f747261 69747349 63455361 char_traitsIcESa\n- 0x003f1f68 49634545 354e6f5f 4f704500 4e35626f IcEE5No_OpE.N5bo\n- 0x003f1f78 6f737431 35636f6e 64697469 6f6e5f65 ost15condition_e\n- 0x003f1f88 72726f72 45000000 4e35626f 6f737431 rrorE...N5boost1\n- 0x003f1f98 306c6f63 6b5f6572 726f7245 00000000 0lock_errorE....\n- 0x003f1fa8 4e35626f 6f737436 64657461 696c3135 N5boost6detail15\n- 0x003f1fb8 73705f63 6f756e74 65645f62 61736545 sp_counted_baseE\n- 0x003f1fc8 00000000 4e35626f 6f737431 38746872 ....N5boost18thr\n- 0x003f1fd8 6561645f 696e7465 72727570 74656445 ead_interruptedE\n- 0x003f1fe8 00000000 4e35626f 6f737432 696f3132 ....N5boost2io12\n- 0x003f1ff8 666f726d 61745f65 72726f72 45000000 format_errorE...\n- 0x003f2008 4e35626f 6f737432 696f3137 6261645f N5boost2io17bad_\n- 0x003f2018 666f726d 61745f73 7472696e 67450000 format_stringE..\n- 0x003f2028 4e35626f 6f737432 696f3132 746f6f5f N5boost2io12too_\n- 0x003f2038 6665775f 61726773 45000000 4e35626f few_argsE...N5bo\n- 0x003f2048 6f737432 696f3133 746f6f5f 6d616e79 ost2io13too_many\n- 0x003f2058 5f617267 73450000 4e35626f 6f737432 _argsE..N5boost2\n- 0x003f2068 696f3138 62617369 635f616c 74737472 io18basic_altstr\n- 0x003f2078 696e6762 75664963 53743131 63686172 ingbufIcSt11char\n- 0x003f2088 5f747261 69747349 63455361 49634545 _traitsIcESaIcEE\n- 0x003f2098 45000000 4e35626f 6f737431 30777261 E...N5boost10wra\n- 0x003f20a8 70657863 65707449 4e535f31 306c6f63 pexceptINS_10loc\n- 0x003f20b8 6b5f6572 726f7245 45450000 4e35626f k_errorEEE..N5bo\n- 0x003f20c8 6f737431 30777261 70657863 65707449 ost10wrapexceptI\n- 0x003f20d8 4e535f31 35636f6e 64697469 6f6e5f65 NS_15condition_e\n- 0x003f20e8 72726f72 45454500 4e35626f 6f737431 rrorEEE.N5boost1\n- 0x003f20f8 30777261 70657863 65707449 4e535f32 0wrapexceptINS_2\n- 0x003f2108 696f3137 6261645f 666f726d 61745f73 io17bad_format_s\n- 0x003f2118 7472696e 67454545 00000000 4e35626f tringEEE....N5bo\n- 0x003f2128 6f737431 30777261 70657863 65707449 ost10wrapexceptI\n- 0x003f2138 4e535f32 696f3132 746f6f5f 6665775f NS_2io12too_few_\n- 0x003f2148 61726773 45454500 4e35626f 6f737436 argsEEE.N5boost6\n- 0x003f2158 64657461 696c3131 74687265 61645f64 detail11thread_d\n- 0x003f2168 61746149 4e535f33 5f626936 62696e64 ataINS_3_bi6bind\n- 0x003f2178 5f744976 4e535f34 5f6d6669 336d6632 _tIvNS_4_mfi3mf2\n- 0x003f2188 49763134 48617368 53746174 69737469 Iv14HashStatisti\n- 0x003f2198 63734979 456a504e 53375f32 35617262 csIyEjPNS7_25arb\n- 0x003f21a8 735f7468 72656164 73686172 65636f6e s_threadsharecon\n- 0x003f21b8 74726f6c 5f744545 454e5332 5f356c69 trol_tEEENS2_5li\n- 0x003f21c8 73743349 4e53325f 3576616c 75654950 st3INS2_5valueIP\n- 0x003f21d8 53375f45 454e5343 5f496a45 454e5343 S7_EENSC_IjEENSC\n- 0x003f21e8 5f495339 5f454545 45454545 45000000 _IS9_EEEEEEEE...\n- 0x003f21f8 4e35626f 6f737436 64657461 696c3131 N5boost6detail11\n- 0x003f2208 74687265 61645f64 61746149 4e535f33 thread_dataINS_3\n- 0x003f2218 5f626936 62696e64 5f744976 4e535f34 _bi6bind_tIvNS_4\n- 0x003f2228 5f6d6669 336d6632 49763134 48617368 _mfi3mf2Iv14Hash\n- 0x003f2238 53746174 69737469 63734936 564c7569 StatisticsI6VLui\n- 0x003f2248 6e74494c 6a313238 4545456a 504e5339 ntILj128EEEjPNS9\n- 0x003f2258 5f323561 7262735f 74687265 61647368 _25arbs_threadsh\n- 0x003f2268 61726563 6f6e7472 6f6c5f74 4545454e arecontrol_tEEEN\n- 0x003f2278 53325f35 6c697374 33494e53 325f3576 S2_5list3INS2_5v\n- 0x003f2288 616c7565 49505339 5f45454e 53455f49 alueIPS9_EENSE_I\n- 0x003f2298 6a45454e 53455f49 53425f45 45454545 jEENSE_ISB_EEEEE\n- 0x003f22a8 45454500 4e35626f 6f737436 64657461 EEE.N5boost6deta\n- 0x003f22b8 696c3131 74687265 61645f64 61746149 il11thread_dataI\n- 0x003f22c8 4e535f33 5f626936 62696e64 5f744976 NS_3_bi6bind_tIv\n- 0x003f22d8 4e535f34 5f6d6669 336d6632 49763134 NS_4_mfi3mf2Iv14\n- 0x003f22e8 48617368 53746174 69737469 63734936 HashStatisticsI6\n- 0x003f22f8 564c7569 6e74494c 6a323536 4545456a VLuintILj256EEEj\n- 0x003f2308 504e5339 5f323561 7262735f 74687265 PNS9_25arbs_thre\n- 0x003f2318 61647368 61726563 6f6e7472 6f6c5f74 adsharecontrol_t\n- 0x003f2328 4545454e 53325f35 6c697374 33494e53 EEENS2_5list3INS\n- 0x003f2338 325f3576 616c7565 49505339 5f45454e 2_5valueIPS9_EEN\n- 0x003f2348 53455f49 6a45454e 53455f49 53425f45 SE_IjEENSE_ISB_E\n- 0x003f2358 45454545 45454500 4e35626f 6f737436 EEEEEEE.N5boost6\n- 0x003f2368 64657461 696c3131 74687265 61645f64 detail11thread_d\n- 0x003f2378 61746149 4e535f33 5f626936 62696e64 ataINS_3_bi6bind\n- 0x003f2388 5f744976 4e535f34 5f6d6669 336d6632 _tIvNS_4_mfi3mf2\n- 0x003f2398 49763134 48617368 53746174 69737469 Iv14HashStatisti\n- 0x003f23a8 63734936 564c7569 6e74494c 6a353132 csI6VLuintILj512\n- 0x003f23b8 4545456a 504e5339 5f323561 7262735f EEEjPNS9_25arbs_\n- 0x003f23c8 74687265 61647368 61726563 6f6e7472 threadsharecontr\n- 0x003f23d8 6f6c5f74 4545454e 53325f35 6c697374 ol_tEEENS2_5list\n- 0x003f23e8 33494e53 325f3576 616c7565 49505339 3INS2_5valueIPS9\n- 0x003f23f8 5f45454e 53455f49 6a45454e 53455f49 _EENSE_IjEENSE_I\n- 0x003f2408 53425f45 45454545 45454500 4e35626f SB_EEEEEEEE.N5bo\n- 0x003f2418 6f737431 30777261 70657863 65707449 ost10wrapexceptI\n- 0x003f2428 4e535f32 696f3133 746f6f5f 6d616e79 NS_2io13too_many\n- 0x003f2438 5f617267 73454545 00000000 4e35626f _argsEEE....N5bo\n- 0x003f2448 6f737432 696f3232 62617369 635f6f61 ost2io22basic_oa\n- 0x003f2458 6c747374 72696e67 73747265 616d4963 ltstringstreamIc\n- 0x003f2468 53743131 63686172 5f747261 69747349 St11char_traitsI\n- 0x003f2478 63455361 49634545 45000000 4e35626f cESaIcEEE...N5bo\n- 0x003f2488 6f737436 64657461 696c3137 73705f63 ost6detail17sp_c\n- 0x003f2498 6f756e74 65645f69 6d706c5f 70494e53 ounted_impl_pINS\n- 0x003f24a8 305f3131 74687265 61645f64 61746149 0_11thread_dataI\n- 0x003f24b8 4e535f33 5f626936 62696e64 5f744976 NS_3_bi6bind_tIv\n- 0x003f24c8 4e535f34 5f6d6669 336d6632 49763134 NS_4_mfi3mf2Iv14\n- 0x003f24d8 48617368 53746174 69737469 63734979 HashStatisticsIy\n- 0x003f24e8 456a504e 53385f32 35617262 735f7468 EjPNS8_25arbs_th\n- 0x003f24f8 72656164 73686172 65636f6e 74726f6c readsharecontrol\n- 0x003f2508 5f744545 454e5333 5f356c69 73743349 _tEEENS3_5list3I\n- 0x003f2518 4e53335f 3576616c 75654950 53385f45 NS3_5valueIPS8_E\n- 0x003f2528 454e5344 5f496a45 454e5344 5f495341 ENSD_IjEENSD_ISA\n- 0x003f2538 5f454545 45454545 45454500 4e35626f _EEEEEEEEEE.N5bo\n- 0x003f2548 6f737436 64657461 696c3137 73705f63 ost6detail17sp_c\n- 0x003f2558 6f756e74 65645f69 6d706c5f 70494e53 ounted_impl_pINS\n- 0x003f2568 305f3131 74687265 61645f64 61746149 0_11thread_dataI\n- 0x003f2578 4e535f33 5f626936 62696e64 5f744976 NS_3_bi6bind_tIv\n- 0x003f2588 4e535f34 5f6d6669 336d6632 49763134 NS_4_mfi3mf2Iv14\n- 0x003f2598 48617368 53746174 69737469 63734936 HashStatisticsI6\n- 0x003f25a8 564c7569 6e74494c 6a313238 4545456a VLuintILj128EEEj\n- 0x003f25b8 504e5341 5f323561 7262735f 74687265 PNSA_25arbs_thre\n- 0x003f25c8 61647368 61726563 6f6e7472 6f6c5f74 adsharecontrol_t\n- 0x003f25d8 4545454e 53335f35 6c697374 33494e53 EEENS3_5list3INS\n- 0x003f25e8 335f3576 616c7565 49505341 5f45454e 3_5valueIPSA_EEN\n- 0x003f25f8 53465f49 6a45454e 53465f49 53435f45 SF_IjEENSF_ISC_E\n- 0x003f2608 45454545 45454545 45000000 4e35626f EEEEEEEEE...N5bo\n- 0x003f2618 6f737436 64657461 696c3137 73705f63 ost6detail17sp_c\n- 0x003f2628 6f756e74 65645f69 6d706c5f 70494e53 ounted_impl_pINS\n- 0x003f2638 305f3131 74687265 61645f64 61746149 0_11thread_dataI\n- 0x003f2648 4e535f33 5f626936 62696e64 5f744976 NS_3_bi6bind_tIv\n- 0x003f2658 4e535f34 5f6d6669 336d6632 49763134 NS_4_mfi3mf2Iv14\n- 0x003f2668 48617368 53746174 69737469 63734936 HashStatisticsI6\n- 0x003f2678 564c7569 6e74494c 6a323536 4545456a VLuintILj256EEEj\n- 0x003f2688 504e5341 5f323561 7262735f 74687265 PNSA_25arbs_thre\n- 0x003f2698 61647368 61726563 6f6e7472 6f6c5f74 adsharecontrol_t\n- 0x003f26a8 4545454e 53335f35 6c697374 33494e53 EEENS3_5list3INS\n- 0x003f26b8 335f3576 616c7565 49505341 5f45454e 3_5valueIPSA_EEN\n- 0x003f26c8 53465f49 6a45454e 53465f49 53435f45 SF_IjEENSF_ISC_E\n- 0x003f26d8 45454545 45454545 45000000 4e35626f EEEEEEEEE...N5bo\n- 0x003f26e8 6f737436 64657461 696c3137 73705f63 ost6detail17sp_c\n- 0x003f26f8 6f756e74 65645f69 6d706c5f 70494e53 ounted_impl_pINS\n- 0x003f2708 305f3131 74687265 61645f64 61746149 0_11thread_dataI\n- 0x003f2718 4e535f33 5f626936 62696e64 5f744976 NS_3_bi6bind_tIv\n- 0x003f2728 4e535f34 5f6d6669 336d6632 49763134 NS_4_mfi3mf2Iv14\n- 0x003f2738 48617368 53746174 69737469 63734936 HashStatisticsI6\n- 0x003f2748 564c7569 6e74494c 6a353132 4545456a VLuintILj512EEEj\n- 0x003f2758 504e5341 5f323561 7262735f 74687265 PNSA_25arbs_thre\n- 0x003f2768 61647368 61726563 6f6e7472 6f6c5f74 adsharecontrol_t\n- 0x003f2778 4545454e 53335f35 6c697374 33494e53 EEENS3_5list3INS\n- 0x003f2788 335f3576 616c7565 49505341 5f45454e 3_5valueIPSA_EEN\n- 0x003f2798 53465f49 6a45454e 53465f49 53435f45 SF_IjEENSF_ISC_E\n- 0x003f27a8 45454545 45454545 45000000 4e35626f EEEEEEEEE...N5bo\n- 0x003f27b8 6f737436 64657461 696c3138 73705f63 ost6detail18sp_c\n- 0x003f27c8 6f756e74 65645f69 6d706c5f 70644950 ounted_impl_pdIP\n- 0x003f27d8 4e535f32 696f3138 62617369 635f616c NS_2io18basic_al\n- 0x003f27e8 74737472 696e6762 75664963 53743131 tstringbufIcSt11\n- 0x003f27f8 63686172 5f747261 69747349 63455361 char_traitsIcESa\n- 0x003f2808 49634545 454e5332 5f323262 61736963 IcEEENS2_22basic\n- 0x003f2818 5f6f616c 74737472 696e6773 74726561 _oaltstringstrea\n- 0x003f2828 6d496353 355f5336 5f45354e 6f5f4f70 mIcS5_S6_E5No_Op\n- 0x003f2838 45454500 41434754 41434754 41434754 EEE.ACGTACGTACGT\n- 0x003f2848 41434754 00000000 ffffff00 00000000 ACGT............\n- 0x003f2858 53484653 3a090000 09656f20 00000000 SHFS:....eo ....\n- 0x003f2868 09252000 096e6820 00000000 09736720 .% ..nh .....sg \n- 0x003f2878 00000000 09776720 00000000 09626166 .....wg .....baf\n- 0x003f2888 20000000 096e7270 20000000 09727020 ....nrp ....rp \n- 0x003f2898 00000000 09723164 20000000 09723264 .....r1d ....r2d\n- 0x003f28a8 20000000 4d57533a 09000000 0974616b ...MWS:.....tak\n- 0x003f28b8 20000000 09736720 20000000 09776720 ....sg ....wg \n- 0x003f28c8 20000000 09726570 20000000 09666c6c ....rep ....fll\n- 0x003f28d8 20000000 09666c65 20000000 61647365 ....fle ...adse\n- 0x003f28e8 3a206964 313a2000 20696432 3a200000 : id1: . id2: ..\n- 0x003f28f8 206c6531 3a200000 20726531 3a200000 le1: .. re1: ..\n- 0x003f2908 206c6532 3a200000 20726532 3a200000 le2: .. re2: ..\n- 0x003f2918 206c6e31 3a200000 206c6e32 3a200000 ln1: .. ln2: ..\n- 0x003f2928 20746c3a 20000000 206f6c3a 20000000 tl: ... ol: ...\n- 0x003f2938 20647231 3a200000 20647232 3a200000 dr1: .. dr2: ..\n- 0x003f2948 766f6964 20536b69 6d3c5456 48415348 void Skim::transformSe\n- 0x003f2968 71546f56 61726961 626c6548 61736820 qToVariableHash \n- 0x003f2978 282e2e2e 29000000 766f6964 20536b69 (...)...void Ski\n- 0x003f2988 6d3c5456 48415348 5f543e3a 3a676574 m::get\n- 0x003f2998 4f766572 6c617043 72697465 72696f6e OverlapCriterion\n- 0x003f29a8 4c657665 6c28636f 6e737420 75696e74 Level(const uint\n- 0x003f29b8 33322061 63747265 61646964 2c20636f 32 actreadid, co\n- 0x003f29c8 6e737420 75696e74 38207365 71747970 nst uint8 seqtyp\n- 0x003f29d8 652c2063 6f6e7374 20414453 45737469 e, const ADSEsti\n- 0x003f29e8 6d61746f 72202620 61647365 2c20636f mator & adse, co\n- 0x003f29f8 6e737420 75696e74 38207265 6c73636f nst uint8 relsco\n- 0x003f2a08 72652c20 75696e74 38202620 6c657665 re, uint8 & leve\n- 0x003f2a18 6c6c2c20 75696e74 38202620 6c657665 ll, uint8 & leve\n- 0x003f2a28 6c722900 75696e74 33322053 6b696d3c lr).uint32 Skim<\n- 0x003f2a38 54564841 53485f54 3e3a3a73 6b696d47 TVHASH_T>::skimG\n- 0x003f2a48 6f28202e 2e2e2029 00000000 75696e74 o( ... )....uint\n- 0x003f2a58 33322053 6b696d3c 54564841 53485f54 32 Skim::computePartit\n- 0x003f2a78 696f6e28 75696e74 3332206d 61786d65 ion(uint32 maxme\n- 0x003f2a88 6d757361 67652c20 626f6f6c 20636f6d musage, bool com\n- 0x003f2a98 70757465 6e756d70 61727469 74696f6e putenumpartition\n- 0x003f2aa8 73290000 766f6964 20536b69 6d3c5456 s)..void Skim::selectP\n- 0x003f2ac8 6f74656e 7469616c 48697473 466f7253 otentialHitsForS\n- 0x003f2ad8 61766532 28636f6e 73742069 6e743820 ave2(const int8 \n- 0x003f2ae8 64697265 6374696f 6e2c2063 6f6e7374 direction, const\n- 0x003f2af8 2075696e 74333220 61637472 65616469 uint32 actreadi\n- 0x003f2b08 642c2063 66685f74 68726561 64646174 d, cfh_threaddat\n- 0x003f2b18 615f7420 26206366 68642900 766f6964 a_t & cfhd).void\n- 0x003f2b28 20536b69 6d3c5456 48415348 5f543e3a Skim:\n- 0x003f2b38 3a746872 6561646c 6f6f7028 636f6e73 :threadloop(cons\n- 0x003f2b48 74207569 6e743332 20746872 6561646e t uint32 threadn\n- 0x003f2b58 72290000 766f6964 20536b69 6d3c5456 r)..void Skim::purgeUn\n- 0x003f2b78 6e656365 73736172 79486974 7346726f necessaryHitsFro\n- 0x003f2b88 6d536b69 6d46696c 65287374 643a3a73 mSkimFile(std::s\n- 0x003f2b98 7472696e 67202620 66696c65 6e616d65 tring & filename\n- 0x003f2ba8 2c20636f 6e737420 696e7438 20726964 , const int8 rid\n- 0x003f2bb8 32646972 2c207374 643a3a76 6563746f 2dir, std::vecto\n- 0x003f2bc8 723c7569 6e74383e 20262070 726d6174 r & prmat\n- 0x003f2bd8 63686573 29000000 766f6964 20536b69 ches)...void Ski\n- 0x003f2be8 6d3c5456 48415348 5f543e3a 3a66696e m::fin\n- 0x003f2bf8 64506572 66656374 5261696c 4d617463 dPerfectRailMatc\n- 0x003f2c08 68657349 6e536b69 6d46696c 65287374 hesInSkimFile(st\n- 0x003f2c18 643a3a73 7472696e 67202620 66696c65 d::string & file\n- 0x003f2c28 6e616d65 2c20636f 6e737420 696e7438 name, const int8\n- 0x003f2c38 20726964 32646972 2c207374 643a3a76 rid2dir, std::v\n- 0x003f2c48 6563746f 723c7569 6e74383e 20262070 ector & p\n- 0x003f2c58 726d6174 63686573 29000000 766f6964 rmatches)...void\n- 0x003f2c68 20536b69 6d3c5456 48415348 5f543e3a Skim:\n- 0x003f2c78 3a707572 67654d61 74636846 696c6549 :purgeMatchFileI\n- 0x003f2c88 664e6565 64656428 696e7438 20646972 fNeeded(int8 dir\n- 0x003f2c98 65637469 6f6e2900 696e7433 3220536b ection).int32 Sk\n- 0x003f2ca8 696d3c54 56484153 485f543e 3a3a6669 im::fi\n- 0x003f2cb8 6e644164 6170746f 72526967 6874436c ndAdaptorRightCl\n- 0x003f2cc8 69702852 65616420 26206163 74726561 ip(Read & actrea\n- 0x003f2cd8 642c2075 696e7433 32206d69 6e686173 d, uint32 minhas\n- 0x003f2ce8 6865732e 20696e74 33322074 68726561 hes. int32 threa\n- 0x003f2cf8 64696429 00000000 696e6c69 6e652062 did)....inline b\n- 0x003f2d08 6f6f6c20 63686563 6b496642 616e6e65 ool checkIfBanne\n- 0x003f2d18 64287569 6e743332 20696431 2c207569 d(uint32 id1, ui\n- 0x003f2d28 6e743332 20696432 29000000 626f6f73 nt32 id2)...boos\n- 0x003f2d38 743a3a63 6f6e6469 74696f6e 5f766172 t::condition_var\n- 0x003f2d48 6961626c 655f616e 793a3a7e 636f6e64 iable_any::~cond\n- 0x003f2d58 6974696f 6e5f7661 72696162 6c655f61 ition_variable_a\n- 0x003f2d68 6e792829 00000000 626f6f73 743a3a63 ny()....boost::c\n- 0x003f2d78 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n- 0x003f2d88 655f616e 793a3a63 6f6e6469 74696f6e e_any::condition\n- 0x003f2d98 5f766172 6961626c 655f616e 79282920 _variable_any() \n- 0x003f2da8 6661696c 65642069 6e207074 68726561 failed in pthrea\n- 0x003f2db8 645f6d75 7465785f 696e6974 00000000 d_mutex_init....\n- 0x003f2dc8 626f6f73 743a3a63 6f6e6469 74696f6e boost::condition\n- 0x003f2dd8 5f766172 6961626c 655f616e 793a3a63 _variable_any::c\n- 0x003f2de8 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n- 0x003f2df8 655f616e 79282900 626f6f73 743a3a63 e_any().boost::c\n- 0x003f2e08 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n- 0x003f2e18 655f616e 793a3a63 6f6e6469 74696f6e e_any::condition\n- 0x003f2e28 5f766172 6961626c 655f616e 79282920 _variable_any() \n- 0x003f2e38 6661696c 65642069 6e207074 68726561 failed in pthrea\n- 0x003f2e48 645f636f 6e645f69 6e697400 53746172 d_cond_init.Star\n- 0x003f2e58 746c6576 656c3e3d 3230303f 20000000 tlevel>=200? ...\n- 0x003f2e68 09696431 3a200000 556e6b6e 6f776e2f .id1: ..Unknown/\n- 0x003f2e78 756e6861 6e646c65 64207365 71747970 unhandled seqtyp\n- 0x003f2e88 65200000 69643120 00000000 203e3d20 e ..id1 .... >= \n- 0x003f2e98 626f702e 73697a65 28292000 68617368 bop.size() .hash\n- 0x003f2ea8 73617665 73746570 70696e67 203c2031 savestepping < 1\n- 0x003f2eb8 203f0000 20627020 6c6f6e67 20616e64 ?.. bp long and\n- 0x003f2ec8 20746875 73206c6f 6e676572 20746861 thus longer tha\n- 0x003f2ed8 6e20534b 494d335f 4d415852 45414453 n SKIM3_MAXREADS\n- 0x003f2ee8 495a4541 4c4c4f57 45442028 00000000 IZEALLOWED (....\n- 0x003f2ef8 29206261 7365732e 20536b69 6d206361 ) bases. Skim ca\n- 0x003f2f08 6e6e6f74 2068616e 646c6520 74686174 nnot handle that\n- 0x003f2f18 2c20736f 7272792e 00000000 7461676d , sorry.....tagm\n- 0x003f2f28 61736b76 6563746f 722e7369 7a652829 askvector.size()\n- 0x003f2f38 20000000 20213d20 736c656e 20000000 ... != slen ...\n- 0x003f2f48 556e6b6e 6f776e20 62617365 20270000 Unknown base '..\n- 0x003f2f58 20696e20 5f434c49 50504544 5f207365 in _CLIPPED_ se\n- 0x003f2f68 7175656e 63652000 536f6d65 7468696e quence .Somethin\n- 0x003f2f78 67277320 6e6f7420 72696768 74206865 g's not right he\n- 0x003f2f88 72652e00 20697320 6c6f6e67 65722074 re.. is longer t\n- 0x003f2f98 68616e20 534b494d 335f4d41 58524541 han SKIM3_MAXREA\n- 0x003f2fa8 4453495a 45414c4c 4f574544 20280000 DSIZEALLOWED (..\n- 0x003f2fb8 29206261 7365732e 20534b49 4d206361 ) bases. SKIM ca\n- 0x003f2fc8 6e6e6f74 2068616e 646c6520 74686973 nnot handle this\n- 0x003f2fd8 2c206162 6f727469 6e672e0a 00000000 , aborting......\n- 0x003f2fe8 626f6f73 743a3a63 6f6e6469 74696f6e boost::condition\n- 0x003f2ff8 5f766172 6961626c 655f616e 793a3a77 _variable_any::w\n- 0x003f3008 61697428 29206661 696c6564 20696e20 ait() failed in \n- 0x003f3018 70746872 6561645f 636f6e64 5f776169 pthread_cond_wai\n- 0x003f3028 74000000 722b0000 2f656c6f 672e736b t...r+../elog.sk\n- 0x003f3038 696d2e70 75682e00 0a536b69 6d3a2065 im.puh...Skim: e\n- 0x003f3048 6c6f6720 00000000 2f656c6f 672e736b log ..../elog.sk\n- 0x003f3058 696d2e70 75682e63 6f756e74 2e000000 im.puh.count....\n- 0x003f3068 0a536b69 6d3a2065 6c6f6720 636f756e .Skim: elog coun\n- 0x003f3078 74200000 0a747275 6e636174 696e6720 t ...truncating \n- 0x003f3088 00000000 50757267 65643a09 00000000 ....Purged:.....\n- 0x003f3098 09280000 4b657074 3a090000 436f756c .(..Kept:...Coul\n- 0x003f30a8 64206e6f 74207772 69746520 616e796d d not write anym\n- 0x003f30b8 6f726520 746f206e 6f726d61 6c697365 ore to normalise\n- 0x003f30c8 6420736b 696d2066 696c652e 20446973 d skim file. Dis\n- 0x003f30d8 6b206675 6c6c3f20 4368616e 67656420 k full? Changed \n- 0x003f30e8 7065726d 69737369 6f6e733f 00000000 permissions?....\n- 0x003f30f8 7472756e 63617465 64200000 436f756c truncated ..Coul\n- 0x003f3108 64206e6f 74207472 756e6361 7465206e d not truncate n\n- 0x003f3118 6f726d61 6c697365 6420736b 696d2066 ormalised skim f\n- 0x003f3128 696c653f 20537472 616e6765 202e2e2e ile? Strange ...\n- 0x003f3138 00000000 656e6f75 67680000 666e616d ....enough..fnam\n- 0x003f3148 652d3e65 6d707479 2829203f 3f3f0000 e->empty() ???..\n- 0x003f3158 63616c6c 20746f20 656d7074 7920626f call to empty bo\n- 0x003f3168 6f73743a 3a66756e 6374696f 6e000000 ost::function...\n- 0x003f3178 766f6964 20626f6f 73743a3a 636f6e64 void boost::cond\n- 0x003f3188 6974696f 6e5f7661 72696162 6c655f61 ition_variable_a\n- 0x003f3198 6e793a3a 6e6f7469 66795f61 6c6c2829 ny::notify_all()\n- 0x003f31a8 00000000 74687265 61646e72 3e3d534b ....threadnr>=SK\n- 0x003f31b8 494d335f 66617263 645f7665 63746f72 IM3_farcd_vector\n- 0x003f31c8 2e73697a 6528293f 3f3f0000 766f6964 .size()???..void\n- 0x003f31d8 20626f6f 73743a3a 636f6e64 6974696f boost::conditio\n- 0x003f31e8 6e5f7661 72696162 6c655f61 6e793a3a n_variable_any::\n- 0x003f31f8 6e6f7469 66795f6f 6e652829 00000000 notify_one()....\n- 0x003f3208 4f6f6f6f 6f6f7073 2c207472 79696e67 Oooooops, trying\n- 0x003f3218 20746f20 75736520 74687265 61642069 to use thread i\n- 0x003f3228 64200000 2c206275 74207072 65706172 d .., but prepar\n- 0x003f3238 6564206f 6e6c7920 666f7220 00000000 ed only for ....\n- 0x003f3248 20746872 65616473 3f3f3f00 2f656c6f threads???./elo\n- 0x003f3258 672e736b 696d2e73 61766532 2e000000 g.skim.save2....\n- 0x003f3268 74616b65 6e3a0900 436f756c 64206e6f taken:..Could no\n- 0x003f3278 74207772 69746520 616e796d 6f726520 t write anymore \n- 0x003f3288 746f2073 6b696d68 69742073 61766535 to skimhit save5\n- 0x003f3298 2e204469 736b2066 756c6c3f 20436861 . Disk full? Cha\n- 0x003f32a8 6e676564 20706572 6d697373 696f6e73 nged permissions\n- 0x003f32b8 3f000000 64726f70 7065643a 09000000 ?...dropped:....\n- 0x003f32c8 74687265 61646e72 3e3d534b 494d335f threadnr>=SKIM3_\n- 0x003f32d8 63666864 5f766563 746f722e 73697a65 cfhd_vector.size\n- 0x003f32e8 28293f3f 3f000000 436f756c 64206e6f ()???...Could no\n- 0x003f32f8 74207772 69746520 616e796d 6f726520 t write anymore \n- 0x003f3308 746f2073 6b696d68 69742073 61766536 to skimhit save6\n- 0x003f3318 2e204469 736b2066 756c6c3f 20436861 . Disk full? Cha\n- 0x003f3328 6e676564 20706572 6d697373 696f6e73 nged permissions\n- 0x003f3338 3f000000 706f7366 6d617463 686e616d ?...posfmatchnam\n- 0x003f3348 652e656d 70747928 29203f3f 3f000000 e.empty() ???...\n- 0x003f3358 706f7363 6d617463 686e616d 652e656d poscmatchname.em\n- 0x003f3368 70747928 29203f3f 3f000000 4e6f7720 pty() ???...Now \n- 0x003f3378 72756e6e 696e6720 74687265 61646564 running threaded\n- 0x003f3388 20616e64 20706172 74697469 6f6e6564 and partitioned\n- 0x003f3398 20736b69 6d6d6572 2d000000 20706172 skimmer-... par\n- 0x003f33a8 74697469 6f6e7320 696e2000 20746872 titions in . thr\n- 0x003f33b8 65616473 3a000000 0a0a4869 74732063 eads:.....Hits c\n- 0x003f33c8 686f7365 6e3a2000 4e35626f 6f737431 hosen: .N5boost1\n- 0x003f33d8 37626164 5f66756e 6374696f 6e5f6361 7bad_function_ca\n- 0x003f33e8 6c6c4500 4e35626f 6f737431 30777261 llE.N5boost10wra\n- 0x003f33f8 70657863 65707449 4e535f31 37626164 pexceptINS_17bad\n- 0x003f3408 5f66756e 6374696f 6e5f6361 6c6c4545 _function_callEE\n- 0x003f3418 45000000 4e35626f 6f737436 64657461 E...N5boost6deta\n- 0x003f3428 696c3131 74687265 61645f64 61746149 il11thread_dataI\n- 0x003f3438 4e535f33 5f626936 62696e64 5f74494e NS_3_bi6bind_tIN\n- 0x003f3448 53325f31 31756e73 70656369 66696564 S2_11unspecified\n- 0x003f3458 454e535f 3866756e 6374696f 6e494676 ENS_8functionIFv\n- 0x003f3468 6a454545 4e53325f 356c6973 7431494e jEEENS2_5list1IN\n- 0x003f3478 53325f35 76616c75 65496a45 45454545 S2_5valueIjEEEEE\n- 0x003f3488 45454500 4e35626f 6f737433 5f626936 EEE.N5boost3_bi6\n- 0x003f3498 62696e64 5f744976 4e535f34 5f6d6669 bind_tIvNS_4_mfi\n- 0x003f34a8 336d6631 49763453 6b696d49 79456a45 3mf1Iv4SkimIyEjE\n- 0x003f34b8 454e5330 5f356c69 73743249 4e53305f ENS0_5list2INS0_\n- 0x003f34c8 3576616c 75654950 53355f45 454e535f 5valueIPS5_EENS_\n- 0x003f34d8 33617267 494c6931 45454545 45454500 3argILi1EEEEEEE.\n- 0x003f34e8 4e35626f 6f737436 64657461 696c3137 N5boost6detail17\n- 0x003f34f8 73705f63 6f756e74 65645f69 6d706c5f sp_counted_impl_\n- 0x003f3508 70494e53 305f3131 74687265 61645f64 pINS0_11thread_d\n- 0x003f3518 61746149 4e535f33 5f626936 62696e64 ataINS_3_bi6bind\n- 0x003f3528 5f74494e 53335f31 31756e73 70656369 _tINS3_11unspeci\n- 0x003f3538 66696564 454e535f 3866756e 6374696f fiedENS_8functio\n- 0x003f3548 6e494676 6a454545 4e53335f 356c6973 nIFvjEEENS3_5lis\n- 0x003f3558 7431494e 53335f35 76616c75 65496a45 t1INS3_5valueIjE\n- 0x003f3568 45454545 45454545 45000000 4e35626f EEEEEEEEE...N5bo\n- 0x003f3578 6f737433 5f626936 62696e64 5f744976 ost3_bi6bind_tIv\n- 0x003f3588 4e535f34 5f6d6669 336d6631 49763453 NS_4_mfi3mf1Iv4S\n- 0x003f3598 6b696d49 36564c75 696e7449 4c6a3132 kimI6VLuintILj12\n- 0x003f35a8 38454545 6a45454e 53305f35 6c697374 8EEEjEENS0_5list\n- 0x003f35b8 32494e53 305f3576 616c7565 49505337 2INS0_5valueIPS7\n- 0x003f35c8 5f45454e 535f3361 7267494c 69314545 _EENS_3argILi1EE\n- 0x003f35d8 45454545 45000000 4e35626f 6f737433 EEEEE...N5boost3\n- 0x003f35e8 5f626936 62696e64 5f744976 4e535f34 _bi6bind_tIvNS_4\n- 0x003f35f8 5f6d6669 336d6631 49763453 6b696d49 _mfi3mf1Iv4SkimI\n- 0x003f3608 36564c75 696e7449 4c6a3235 36454545 6VLuintILj256EEE\n- 0x003f3618 6a45454e 53305f35 6c697374 32494e53 jEENS0_5list2INS\n- 0x003f3628 305f3576 616c7565 49505337 5f45454e 0_5valueIPS7_EEN\n- 0x003f3638 535f3361 7267494c 69314545 45454545 S_3argILi1EEEEEE\n- 0x003f3648 45000000 4e35626f 6f737433 5f626936 E...N5boost3_bi6\n- 0x003f3658 62696e64 5f744976 4e535f34 5f6d6669 bind_tIvNS_4_mfi\n- 0x003f3668 336d6631 49763453 6b696d49 36564c75 3mf1Iv4SkimI6VLu\n- 0x003f3678 696e7449 4c6a3531 32454545 6a45454e intILj512EEEjEEN\n- 0x003f3688 53305f35 6c697374 32494e53 305f3576 S0_5list2INS0_5v\n- 0x003f3698 616c7565 49505337 5f45454e 535f3361 alueIPS7_EENS_3a\n- 0x003f36a8 7267494c 69314545 45454545 45000000 rgILi1EEEEEEE...\n- 0x003f36b8 ffffff00 00000000 73797374 656d0000 ........system..\n- 0x003f36c8 0a0a4f55 43482120 736f6d65 7468696e ..OUCH! somethin\n- 0x003f36d8 67207374 72616e67 65202e2e 2e207472 g strange ... tr\n- 0x003f36e8 69656420 6d6f7265 20746861 6e203130 ied more than 10\n- 0x003f36f8 30206465 6c657465 73206f66 20000000 0 deletes of ...\n- 0x003f3708 202e2e2e 206c6973 74207369 7a652069 ... list size i\n- 0x003f3718 73200000 0a0a4f55 43482120 736f6d65 s ....OUCH! some\n- 0x003f3728 7468696e 67207765 69726420 2e2e2e20 thing weird ... \n- 0x003f3738 74726965 64206d6f 72652074 68616e20 tried more than \n- 0x003f3748 31323030 2064656c 65746573 206f6620 1200 deletes of \n- 0x003f3758 00000000 5765276c 6c207374 6f702074 ....We'll stop t\n- 0x003f3768 68617420 68657265 2e0a0000 5741524e hat here....WARN\n- 0x003f3778 494e473a 20436f75 6c64206e 6f742064 ING: Could not d\n- 0x003f3788 656c6574 65206f6c 64206669 6c652000 elete old file .\n- 0x003f3798 0a546869 73206361 6e206861 76652061 .This can have a\n- 0x003f37a8 206e756d 62657220 6f662064 69666665 number of diffe\n- 0x003f37b8 72656e74 20726561 736f6e73 2c206e6f rent reasons, no\n- 0x003f37c8 6e65206f 66207468 656d0000 0a776172 ne of them...war\n- 0x003f37d8 72616e74 696e6720 616e2061 626f7274 ranting an abort\n- 0x003f37e8 2c206275 74207468 69732069 73207374 , but this is st\n- 0x003f37f8 72616e67 6520616e 79776179 2e0a0a00 range anyway....\n- 0x003f3808 2f746572 6d696e61 74650000 6d762000 /terminate..mv .\n- 0x003f3818 2f746572 6d696e61 74655f61 636b6e6f /terminate_ackno\n- 0x003f3828 776c6564 67656400 4d61726b 696e6720 wledged.Marking \n- 0x003f3838 706f7373 69626c79 206d6973 61737365 possibly misasse\n- 0x003f3848 6d626c65 64207265 70656174 733a2000 mbled repeats: .\n- 0x003f3858 646f6e65 20737465 7020312c 20737461 done step 1, sta\n- 0x003f3868 7274696e 67207374 65702032 3a000000 rting step 2:...\n- 0x003f3878 0a466f75 6e640a00 202d2000 206e6577 .Found.. - . new\n- 0x003f3888 20537472 6f6e6720 524d4220 2853524d Strong RMB (SRM\n- 0x003f3898 63290a00 206e6577 20576561 6b20524d c).. new Weak RM\n- 0x003f38a8 42202857 524d6329 0a000000 20534e50 B (WRMc).... SNP\n- 0x003f38b8 0a706f73 6974696f 6e732074 61676765 .positions tagge\n- 0x003f38c8 642e0000 646f6e65 2e20466f 756e6420 d...done. Found \n- 0x003f38d8 6e6f6e65 2e000000 766f6964 20417373 none....void Ass\n- 0x003f38e8 656d626c 793a3a72 65667265 7368436f embly::refreshCo\n- 0x003f38f8 6e746967 416e6452 65616470 6f6f6c56 ntigAndReadpoolV\n- 0x003f3908 616c7565 73416674 65724c6f 6164696e aluesAfterLoadin\n- 0x003f3918 67285265 6164506f 6f6c2026 2072702c g(ReadPool & rp,\n- 0x003f3928 20737464 3a3a6c69 73743c43 6f6e7469 std::list & contigs, ui\n- 0x003f3948 6e743820 6e616777 61726e5f 74656d70 nt8 nagwarn_temp\n- 0x003f3958 6c617465 70726f62 6c656d73 29000000 lateproblems)...\n- 0x003f3968 0a0a3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ..==============\n- 0x003f3978 3d3d3d3d 3d3d3d3d 3d3d3d3d 204d656d ============ Mem\n- 0x003f3988 6f727920 73656c66 20617373 6573736d ory self assessm\n- 0x003f3998 656e7420 3d3d3d3d 3d3d3d3d 3d3d3d3d ent ============\n+ 0x003f14e8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003f14f8 3d0a0a00 76656374 6f723c62 6f6f6c3e =...vector\n+ 0x003f1508 3a3a5f4d 5f66696c 6c5f696e 73657274 ::_M_fill_insert\n+ 0x003f1518 00000000 766f6964 20626f6f 73743a3a ....void boost::\n+ 0x003f1528 696f3a3a 64657461 696c3a3a 70757428 io::detail::put(\n+ 0x003f1538 542c2063 6f6e7374 20626f6f 73743a3a T, const boost::\n+ 0x003f1548 696f3a3a 64657461 696c3a3a 666f726d io::detail::form\n+ 0x003f1558 61745f69 74656d3c 43682c20 54722c20 at_item&, typenam\n+ 0x003f1578 6520626f 6f73743a 3a626173 69635f66 e boost::basic_f\n+ 0x003f1588 6f726d61 743c4368 2c205472 2c20416c ormat::string_typ\n+ 0x003f15a8 65262c20 74797065 6e616d65 20626f6f e&, typename boo\n+ 0x003f15b8 73743a3a 62617369 635f666f 726d6174 st::basic_format\n+ 0x003f15c8 3c43682c 2054722c 20416c6c 6f633e3a :\n+ 0x003f15d8 3a696e74 65726e61 6c5f7374 7265616d :internal_stream\n+ 0x003f15e8 6275665f 74262c20 626f6f73 743a3a69 buf_t&, boost::i\n+ 0x003f15f8 6f3a3a64 65746169 6c3a3a6c 6f63616c o::detail::local\n+ 0x003f1608 655f742a 29205b77 69746820 4368203d e_t*) [with Ch =\n+ 0x003f1618 20636861 723b2054 72203d20 7374643a char; Tr = std:\n+ 0x003f1628 3a636861 725f7472 61697473 3c636861 :char_traits; Alloc = std:\n+ 0x003f1648 3a616c6c 6f636174 6f723c63 6861723e :allocator\n+ 0x003f1658 3b205420 3d20636f 6e737420 626f6f73 ; T = const boos\n+ 0x003f1668 743a3a69 6f3a3a64 65746169 6c3a3a70 t::io::detail::p\n+ 0x003f1678 75745f68 6f6c6465 723c6368 61722c20 ut_holder >&; typen\n+ 0x003f16a8 616d6520 626f6f73 743a3a62 61736963 ame boost::basic\n+ 0x003f16b8 5f666f72 6d61743c 43682c20 54722c20 _format::string_t\n+ 0x003f16d8 79706520 3d207374 643a3a5f 5f637878 ype = std::__cxx\n+ 0x003f16e8 31313a3a 62617369 635f7374 72696e67 11::basic_string\n+ 0x003f16f8 3c636861 723e3b20 74797065 6e616d65 ; typename\n+ 0x003f1708 20626f6f 73743a3a 62617369 635f666f boost::basic_fo\n+ 0x003f1718 726d6174 3c43682c 2054722c 20416c6c rmat::internal_st\n+ 0x003f1738 7265616d 6275665f 74203d20 626f6f73 reambuf_t = boos\n+ 0x003f1748 743a3a69 6f3a3a62 61736963 5f616c74 t::io::basic_alt\n+ 0x003f1758 73747269 6e676275 663c6368 61722c20 stringbuf, std::all\n+ 0x003f1788 6f636174 6f723c63 6861723e 203e3b20 ocator >; \n+ 0x003f1798 626f6f73 743a3a69 6f3a3a64 65746169 boost::io::detai\n+ 0x003f17a8 6c3a3a6c 6f63616c 655f7420 3d207374 l::locale_t = st\n+ 0x003f17b8 643a3a6c 6f63616c 655d0000 2f757372 d::locale]../usr\n+ 0x003f17c8 2f696e63 6c756465 2f626f6f 73742f66 /include/boost/f\n+ 0x003f17d8 6f726d61 742f6665 65645f61 7267732e ormat/feed_args.\n+ 0x003f17e8 68707000 643e3000 7265732e 73697a65 hpp.d>0.res.size\n+ 0x003f17f8 2829203d 3d207374 61746963 5f636173 () == static_cas\n+ 0x003f1808 743c7369 7a655f74 7970653e 28772900 t(w).\n+ 0x003f1818 62617365 73706572 68617368 203d3d20 basesperhash == \n+ 0x003f1828 30203f3f 3f000000 75707065 72626173 0 ???...upperbas\n+ 0x003f1838 65732028 00000000 29203e3d 62617365 es (....) >=base\n+ 0x003f1848 73706572 68617368 20000000 68617368 sperhash ...hash\n+ 0x003f1858 73746174 5f743a20 00000000 66726565 stat_t: ....free\n+ 0x003f1868 6d656d3a 20000000 4b656570 20667265 mem: ...Keep fre\n+ 0x003f1878 650a0000 50657263 656e7461 67650a00 e...Percentage..\n+ 0x003f1888 6d626662 313a2000 6d626662 323a2000 mbfb1: .mbfb2: .\n+ 0x003f1898 544e483a 20000000 584d4520 313a2000 TNH: ...XME 1: .\n+ 0x003f18a8 584d4520 323a2000 48535f6e 6570623a XME 2: .HS_nepb:\n+ 0x003f18b8 20000000 2f737461 74746d70 00000000 .../stattmp....\n+ 0x003f18c8 2e62696e 2e677a00 20666f72 2074656d .bin.gz. for tem\n+ 0x003f18d8 706f7261 72792073 74617420 66696c65 porary stat file\n+ 0x003f18e8 206f7574 7075743f 20446973 6b206675 output? Disk fu\n+ 0x003f18f8 6c6c3f20 57726f6e 67207061 74683f20 ll? Wrong path? \n+ 0x003f1908 41636365 73732070 65726d69 7373696f Access permissio\n+ 0x003f1918 6e733f00 48535f68 61736873 74617466 ns?.HS_hashstatf\n+ 0x003f1928 696c656e 616d652e 656d7074 79282920 ilename.empty() \n+ 0x003f1938 3f3f3f00 736f7274 4c6f7732 34426974 ???.sortLow24Bit\n+ 0x003f1948 00000000 48535f68 735f6261 73657370 ....HS_hs_basesp\n+ 0x003f1958 65726861 7368203d 3d203020 3f3f3f00 erhash == 0 ???.\n+ 0x003f1968 6e6f2073 686f7274 63757473 206d6164 no shortcuts mad\n+ 0x003f1978 65202e2e 2e20656d 70747920 68617368 e ... empty hash\n+ 0x003f1988 73746174 733f0000 6873612e 48535f68 stats?..hsa.HS_h\n+ 0x003f1998 735f6261 73657370 65726861 73682000 s_basesperhash .\n+ 0x003f19a8 20213d20 6873622e 48535f68 735f6261 != hsb.HS_hs_ba\n+ 0x003f19b8 73657370 65726861 73682000 736f7274 sesperhash .sort\n+ 0x003f19c8 4c657869 636f6772 61706869 63616c6c Lexicographicall\n+ 0x003f19d8 79557000 736f7274 4279436f 756e7455 yUp.sortByCountU\n+ 0x003f19e8 70000000 52617720 4d48493a 20000000 p...Raw MHI: ...\n+ 0x003f19f8 52617720 6176672e 20667265 712e203a Raw avg. freq. :\n+ 0x003f1a08 20000000 48535320 00000000 09485353 ...HSS .....HSS\n+ 0x003f1a18 543a2000 436f7272 65637465 64206176 T: .Corrected av\n+ 0x003f1a28 672e2066 7265712e 203a2000 466f7263 g. freq. : .Forc\n+ 0x003f1a38 65642061 76672e20 66726571 3a200000 ed avg. freq: ..\n+ 0x003f1a48 436f7272 65637465 64204d48 493a2000 Corrected MHI: .\n+ 0x003f1a58 736f7274 4279436f 756e7444 6f776e00 sortByCountDown.\n+ 0x003f1a68 736f7274 4c657842 79436f75 6e740000 sortLexByCount..\n+ 0x003f1a78 436f756c 64206e6f 74207772 69746520 Could not write \n+ 0x003f1a88 616e796d 6f726520 746f2068 61736820 anymore to hash \n+ 0x003f1a98 66696c65 2e204469 736b2066 756c6c3f file. Disk full?\n+ 0x003f1aa8 20436861 6e676564 20706572 6d697373 Changed permiss\n+ 0x003f1ab8 696f6e73 3f000000 68617368 66696c65 ions?...hashfile\n+ 0x003f1ac8 73696e64 65783e3d 48535f68 61736866 sindex>=HS_hashf\n+ 0x003f1ad8 696c6573 2e73697a 65282920 3f3f3f00 iles.size() ???.\n+ 0x003f1ae8 646f6e65 0a000000 68617368 73746174 done....hashstat\n+ 0x003f1af8 66696c65 6e616d65 2e656d70 74792829 filename.empty()\n+ 0x003f1b08 203f3f3f 00000000 4d617820 656c656d ???....Max elem\n+ 0x003f1b18 656e7473 20706572 2066696c 653a2000 ents per file: .\n+ 0x003f1b28 20666f72 20777269 74696e67 2c206973 for writing, is\n+ 0x003f1b38 20746865 20646973 6b206675 6c6c3f20 the disk full? \n+ 0x003f1b48 41726520 7065726d 69737369 6f6e7320 Are permissions \n+ 0x003f1b58 73657420 72696768 743f0000 4c6f6164 set right?..Load\n+ 0x003f1b68 696e6720 00000000 656c656d 656e7473 ing ....elements\n+ 0x003f1b78 20696e20 66696c65 3a200000 20666f72 in file: .. for\n+ 0x003f1b88 20726561 64696e67 3f204974 20776173 reading? It was\n+ 0x003f1b98 20777269 7474656e 206a7573 74206d6f written just mo\n+ 0x003f1ba8 6d656e74 73206167 6f2c2073 6f6d6574 ments ago, somet\n+ 0x003f1bb8 68696e67 20776974 6820796f 7572206d hing with your m\n+ 0x003f1bc8 61636869 6e652069 73206272 6f6b656e achine is broken\n+ 0x003f1bd8 20492074 68696e6b 2e000000 20627974 I think.... byt\n+ 0x003f1be8 65732069 6e206669 6c652000 20627574 es in file . but\n+ 0x003f1bf8 20726561 64200000 2e205761 73207468 read ... Was th\n+ 0x003f1c08 65206669 6c652064 656c6574 65643f20 e file deleted? \n+ 0x003f1c18 4469736b 2066756c 6c3f0000 61667465 Disk full?..afte\n+ 0x003f1c28 7220636f 6d703a20 00000000 6f70656e r comp: ....open\n+ 0x003f1c38 696e6720 677a0000 20666f72 20726561 ing gz.. for rea\n+ 0x003f1c48 64696e67 20616c74 686f7567 68206974 ding although it\n+ 0x003f1c58 20776173 20777269 7474656e 206a7573 was written jus\n+ 0x003f1c68 74206d6f 6d656e74 73206167 6f3f3f3f t moments ago???\n+ 0x003f1c78 20536f6d 65746869 6e677320 69732062 Somethings is b\n+ 0x003f1c88 726f6b65 6e206f6e 20796f75 72206d61 roken on your ma\n+ 0x003f1c98 6368696e 652e0000 6c6f6164 696e6720 chine...loading \n+ 0x003f1ca8 68656164 65720000 6c6f6164 696e6720 header..loading \n+ 0x003f1cb8 6d61696e 20737461 74697374 69637300 main statistics.\n+ 0x003f1cc8 736f6d65 20737461 74697374 69637300 some statistics.\n+ 0x003f1cd8 736f7274 206c6f77 32340000 73617665 sort low24..save\n+ 0x003f1ce8 20737461 74697374 69637300 466c7573 statistics.Flus\n+ 0x003f1cf8 68696e67 20627566 66657273 20746f20 hing buffers to \n+ 0x003f1d08 6469736b 3a000000 0a416e61 6c797369 disk:....Analysi\n+ 0x003f1d18 6e672068 73746174 2066696c 65733a0a ng hstat files:.\n+ 0x003f1d28 00000000 636c6561 6e207570 2074656d ....clean up tem\n+ 0x003f1d38 706f7261 72792073 74617420 66696c65 porary stat file\n+ 0x003f1d48 732e2e2e 00000000 57726974 696e6720 s.......Writing \n+ 0x003f1d58 74656d70 6f726172 79206873 74617420 temporary hstat \n+ 0x003f1d68 66696c65 733a0a00 2f6d6972 616b6d63 files:../mirakmc\n+ 0x003f1d78 5f000000 436f756c 64206e6f 74206372 _...Could not cr\n+ 0x003f1d88 65617465 206e616d 6520666f 72207465 eate name for te\n+ 0x003f1d98 6d706f72 61727920 64697265 63746f72 mporary director\n+ 0x003f1da8 79203f3f 3f000000 436f756c 64206e6f y ???...Could no\n+ 0x003f1db8 74206372 65617465 2074656d 706f7261 t create tempora\n+ 0x003f1dc8 72792064 69726563 746f7279 20270000 ry directory '..\n+ 0x003f1dd8 273f2043 6865636b 20777269 74652070 '? Check write p\n+ 0x003f1de8 65726d69 7373696f 6e732e00 2f6d6972 ermissions../mir\n+ 0x003f1df8 616b6d63 2e6d6873 2e677a00 4c6f6164 akmc.mhs.gz.Load\n+ 0x003f1e08 696e6720 62616974 73206672 6f6d2000 ing baits from .\n+ 0x003f1e18 736f7274 4d61736b 55700000 72657620 sortMaskUp..rev \n+ 0x003f1e28 00000000 66776420 00000000 54726965 ....fwd ....Trie\n+ 0x003f1e38 6420746f 20617373 69676e20 62617365 d to assign base\n+ 0x003f1e48 20737461 74697374 69637320 28312920 statistics (1) \n+ 0x003f1e58 74686f75 67682074 68657265 20617265 though there are\n+ 0x003f1e68 206e6f20 73746174 69737469 63732077 no statistics w\n+ 0x003f1e78 68696368 2063616e 20626520 61737369 hich can be assi\n+ 0x003f1e88 676e6564 3f20536f 6d657468 696e6727 gned? Something'\n+ 0x003f1e98 73207772 6f6e6720 77697468 20796f75 s wrong with you\n+ 0x003f1ea8 72206461 74612073 65742e00 626f6f73 r data set..boos\n+ 0x003f1eb8 743a3a74 68726561 645f7265 736f7572 t::thread_resour\n+ 0x003f1ec8 63655f65 72726f72 00000000 4e35626f ce_error....N5bo\n+ 0x003f1ed8 6f737431 36626173 655f6672 6f6d5f6d ost16base_from_m\n+ 0x003f1ee8 656d6265 72494e53 5f313073 68617265 emberINS_10share\n+ 0x003f1ef8 645f7074 72494e53 5f32696f 31386261 d_ptrINS_2io18ba\n+ 0x003f1f08 7369635f 616c7473 7472696e 67627566 sic_altstringbuf\n+ 0x003f1f18 49635374 31316368 61725f74 72616974 IcSt11char_trait\n+ 0x003f1f28 73496345 53614963 45454545 454c6930 sIcESaIcEEEEELi0\n+ 0x003f1f38 45454500 4e35626f 6f737432 696f3232 EEE.N5boost2io22\n+ 0x003f1f48 62617369 635f6f61 6c747374 72696e67 basic_oaltstring\n+ 0x003f1f58 73747265 616d4963 53743131 63686172 streamIcSt11char\n+ 0x003f1f68 5f747261 69747349 63455361 49634545 _traitsIcESaIcEE\n+ 0x003f1f78 354e6f5f 4f704500 4e35626f 6f737431 5No_OpE.N5boost1\n+ 0x003f1f88 35636f6e 64697469 6f6e5f65 72726f72 5condition_error\n+ 0x003f1f98 45000000 4e35626f 6f737431 306c6f63 E...N5boost10loc\n+ 0x003f1fa8 6b5f6572 726f7245 00000000 4e35626f k_errorE....N5bo\n+ 0x003f1fb8 6f737436 64657461 696c3135 73705f63 ost6detail15sp_c\n+ 0x003f1fc8 6f756e74 65645f62 61736545 00000000 ounted_baseE....\n+ 0x003f1fd8 4e35626f 6f737431 38746872 6561645f N5boost18thread_\n+ 0x003f1fe8 696e7465 72727570 74656445 00000000 interruptedE....\n+ 0x003f1ff8 4e35626f 6f737432 696f3132 666f726d N5boost2io12form\n+ 0x003f2008 61745f65 72726f72 45000000 4e35626f at_errorE...N5bo\n+ 0x003f2018 6f737432 696f3137 6261645f 666f726d ost2io17bad_form\n+ 0x003f2028 61745f73 7472696e 67450000 4e35626f at_stringE..N5bo\n+ 0x003f2038 6f737432 696f3132 746f6f5f 6665775f ost2io12too_few_\n+ 0x003f2048 61726773 45000000 4e35626f 6f737432 argsE...N5boost2\n+ 0x003f2058 696f3133 746f6f5f 6d616e79 5f617267 io13too_many_arg\n+ 0x003f2068 73450000 4e35626f 6f737432 696f3138 sE..N5boost2io18\n+ 0x003f2078 62617369 635f616c 74737472 696e6762 basic_altstringb\n+ 0x003f2088 75664963 53743131 63686172 5f747261 ufIcSt11char_tra\n+ 0x003f2098 69747349 63455361 49634545 45000000 itsIcESaIcEEE...\n+ 0x003f20a8 4e35626f 6f737431 30777261 70657863 N5boost10wrapexc\n+ 0x003f20b8 65707449 4e535f31 306c6f63 6b5f6572 eptINS_10lock_er\n+ 0x003f20c8 726f7245 45450000 4e35626f 6f737431 rorEEE..N5boost1\n+ 0x003f20d8 30777261 70657863 65707449 4e535f31 0wrapexceptINS_1\n+ 0x003f20e8 35636f6e 64697469 6f6e5f65 72726f72 5condition_error\n+ 0x003f20f8 45454500 4e35626f 6f737431 30777261 EEE.N5boost10wra\n+ 0x003f2108 70657863 65707449 4e535f32 696f3137 pexceptINS_2io17\n+ 0x003f2118 6261645f 666f726d 61745f73 7472696e bad_format_strin\n+ 0x003f2128 67454545 00000000 4e35626f 6f737431 gEEE....N5boost1\n+ 0x003f2138 30777261 70657863 65707449 4e535f32 0wrapexceptINS_2\n+ 0x003f2148 696f3132 746f6f5f 6665775f 61726773 io12too_few_args\n+ 0x003f2158 45454500 4e35626f 6f737436 64657461 EEE.N5boost6deta\n+ 0x003f2168 696c3131 74687265 61645f64 61746149 il11thread_dataI\n+ 0x003f2178 4e535f33 5f626936 62696e64 5f744976 NS_3_bi6bind_tIv\n+ 0x003f2188 4e535f34 5f6d6669 336d6632 49763134 NS_4_mfi3mf2Iv14\n+ 0x003f2198 48617368 53746174 69737469 63734979 HashStatisticsIy\n+ 0x003f21a8 456a504e 53375f32 35617262 735f7468 EjPNS7_25arbs_th\n+ 0x003f21b8 72656164 73686172 65636f6e 74726f6c readsharecontrol\n+ 0x003f21c8 5f744545 454e5332 5f356c69 73743349 _tEEENS2_5list3I\n+ 0x003f21d8 4e53325f 3576616c 75654950 53375f45 NS2_5valueIPS7_E\n+ 0x003f21e8 454e5343 5f496a45 454e5343 5f495339 ENSC_IjEENSC_IS9\n+ 0x003f21f8 5f454545 45454545 45000000 4e35626f _EEEEEEEE...N5bo\n+ 0x003f2208 6f737436 64657461 696c3131 74687265 ost6detail11thre\n+ 0x003f2218 61645f64 61746149 4e535f33 5f626936 ad_dataINS_3_bi6\n+ 0x003f2228 62696e64 5f744976 4e535f34 5f6d6669 bind_tIvNS_4_mfi\n+ 0x003f2238 336d6632 49763134 48617368 53746174 3mf2Iv14HashStat\n+ 0x003f2248 69737469 63734936 564c7569 6e74494c isticsI6VLuintIL\n+ 0x003f2258 6a313238 4545456a 504e5339 5f323561 j128EEEjPNS9_25a\n+ 0x003f2268 7262735f 74687265 61647368 61726563 rbs_threadsharec\n+ 0x003f2278 6f6e7472 6f6c5f74 4545454e 53325f35 ontrol_tEEENS2_5\n+ 0x003f2288 6c697374 33494e53 325f3576 616c7565 list3INS2_5value\n+ 0x003f2298 49505339 5f45454e 53455f49 6a45454e IPS9_EENSE_IjEEN\n+ 0x003f22a8 53455f49 53425f45 45454545 45454500 SE_ISB_EEEEEEEE.\n+ 0x003f22b8 4e35626f 6f737436 64657461 696c3131 N5boost6detail11\n+ 0x003f22c8 74687265 61645f64 61746149 4e535f33 thread_dataINS_3\n+ 0x003f22d8 5f626936 62696e64 5f744976 4e535f34 _bi6bind_tIvNS_4\n+ 0x003f22e8 5f6d6669 336d6632 49763134 48617368 _mfi3mf2Iv14Hash\n+ 0x003f22f8 53746174 69737469 63734936 564c7569 StatisticsI6VLui\n+ 0x003f2308 6e74494c 6a323536 4545456a 504e5339 ntILj256EEEjPNS9\n+ 0x003f2318 5f323561 7262735f 74687265 61647368 _25arbs_threadsh\n+ 0x003f2328 61726563 6f6e7472 6f6c5f74 4545454e arecontrol_tEEEN\n+ 0x003f2338 53325f35 6c697374 33494e53 325f3576 S2_5list3INS2_5v\n+ 0x003f2348 616c7565 49505339 5f45454e 53455f49 alueIPS9_EENSE_I\n+ 0x003f2358 6a45454e 53455f49 53425f45 45454545 jEENSE_ISB_EEEEE\n+ 0x003f2368 45454500 4e35626f 6f737436 64657461 EEE.N5boost6deta\n+ 0x003f2378 696c3131 74687265 61645f64 61746149 il11thread_dataI\n+ 0x003f2388 4e535f33 5f626936 62696e64 5f744976 NS_3_bi6bind_tIv\n+ 0x003f2398 4e535f34 5f6d6669 336d6632 49763134 NS_4_mfi3mf2Iv14\n+ 0x003f23a8 48617368 53746174 69737469 63734936 HashStatisticsI6\n+ 0x003f23b8 564c7569 6e74494c 6a353132 4545456a VLuintILj512EEEj\n+ 0x003f23c8 504e5339 5f323561 7262735f 74687265 PNS9_25arbs_thre\n+ 0x003f23d8 61647368 61726563 6f6e7472 6f6c5f74 adsharecontrol_t\n+ 0x003f23e8 4545454e 53325f35 6c697374 33494e53 EEENS2_5list3INS\n+ 0x003f23f8 325f3576 616c7565 49505339 5f45454e 2_5valueIPS9_EEN\n+ 0x003f2408 53455f49 6a45454e 53455f49 53425f45 SE_IjEENSE_ISB_E\n+ 0x003f2418 45454545 45454500 4e35626f 6f737431 EEEEEEE.N5boost1\n+ 0x003f2428 30777261 70657863 65707449 4e535f32 0wrapexceptINS_2\n+ 0x003f2438 696f3133 746f6f5f 6d616e79 5f617267 io13too_many_arg\n+ 0x003f2448 73454545 00000000 4e35626f 6f737432 sEEE....N5boost2\n+ 0x003f2458 696f3232 62617369 635f6f61 6c747374 io22basic_oaltst\n+ 0x003f2468 72696e67 73747265 616d4963 53743131 ringstreamIcSt11\n+ 0x003f2478 63686172 5f747261 69747349 63455361 char_traitsIcESa\n+ 0x003f2488 49634545 45000000 4e35626f 6f737436 IcEEE...N5boost6\n+ 0x003f2498 64657461 696c3137 73705f63 6f756e74 detail17sp_count\n+ 0x003f24a8 65645f69 6d706c5f 70494e53 305f3131 ed_impl_pINS0_11\n+ 0x003f24b8 74687265 61645f64 61746149 4e535f33 thread_dataINS_3\n+ 0x003f24c8 5f626936 62696e64 5f744976 4e535f34 _bi6bind_tIvNS_4\n+ 0x003f24d8 5f6d6669 336d6632 49763134 48617368 _mfi3mf2Iv14Hash\n+ 0x003f24e8 53746174 69737469 63734979 456a504e StatisticsIyEjPN\n+ 0x003f24f8 53385f32 35617262 735f7468 72656164 S8_25arbs_thread\n+ 0x003f2508 73686172 65636f6e 74726f6c 5f744545 sharecontrol_tEE\n+ 0x003f2518 454e5333 5f356c69 73743349 4e53335f ENS3_5list3INS3_\n+ 0x003f2528 3576616c 75654950 53385f45 454e5344 5valueIPS8_EENSD\n+ 0x003f2538 5f496a45 454e5344 5f495341 5f454545 _IjEENSD_ISA_EEE\n+ 0x003f2548 45454545 45454500 4e35626f 6f737436 EEEEEEE.N5boost6\n+ 0x003f2558 64657461 696c3137 73705f63 6f756e74 detail17sp_count\n+ 0x003f2568 65645f69 6d706c5f 70494e53 305f3131 ed_impl_pINS0_11\n+ 0x003f2578 74687265 61645f64 61746149 4e535f33 thread_dataINS_3\n+ 0x003f2588 5f626936 62696e64 5f744976 4e535f34 _bi6bind_tIvNS_4\n+ 0x003f2598 5f6d6669 336d6632 49763134 48617368 _mfi3mf2Iv14Hash\n+ 0x003f25a8 53746174 69737469 63734936 564c7569 StatisticsI6VLui\n+ 0x003f25b8 6e74494c 6a313238 4545456a 504e5341 ntILj128EEEjPNSA\n+ 0x003f25c8 5f323561 7262735f 74687265 61647368 _25arbs_threadsh\n+ 0x003f25d8 61726563 6f6e7472 6f6c5f74 4545454e arecontrol_tEEEN\n+ 0x003f25e8 53335f35 6c697374 33494e53 335f3576 S3_5list3INS3_5v\n+ 0x003f25f8 616c7565 49505341 5f45454e 53465f49 alueIPSA_EENSF_I\n+ 0x003f2608 6a45454e 53465f49 53435f45 45454545 jEENSF_ISC_EEEEE\n+ 0x003f2618 45454545 45000000 4e35626f 6f737436 EEEEE...N5boost6\n+ 0x003f2628 64657461 696c3137 73705f63 6f756e74 detail17sp_count\n+ 0x003f2638 65645f69 6d706c5f 70494e53 305f3131 ed_impl_pINS0_11\n+ 0x003f2648 74687265 61645f64 61746149 4e535f33 thread_dataINS_3\n+ 0x003f2658 5f626936 62696e64 5f744976 4e535f34 _bi6bind_tIvNS_4\n+ 0x003f2668 5f6d6669 336d6632 49763134 48617368 _mfi3mf2Iv14Hash\n+ 0x003f2678 53746174 69737469 63734936 564c7569 StatisticsI6VLui\n+ 0x003f2688 6e74494c 6a323536 4545456a 504e5341 ntILj256EEEjPNSA\n+ 0x003f2698 5f323561 7262735f 74687265 61647368 _25arbs_threadsh\n+ 0x003f26a8 61726563 6f6e7472 6f6c5f74 4545454e arecontrol_tEEEN\n+ 0x003f26b8 53335f35 6c697374 33494e53 335f3576 S3_5list3INS3_5v\n+ 0x003f26c8 616c7565 49505341 5f45454e 53465f49 alueIPSA_EENSF_I\n+ 0x003f26d8 6a45454e 53465f49 53435f45 45454545 jEENSF_ISC_EEEEE\n+ 0x003f26e8 45454545 45000000 4e35626f 6f737436 EEEEE...N5boost6\n+ 0x003f26f8 64657461 696c3137 73705f63 6f756e74 detail17sp_count\n+ 0x003f2708 65645f69 6d706c5f 70494e53 305f3131 ed_impl_pINS0_11\n+ 0x003f2718 74687265 61645f64 61746149 4e535f33 thread_dataINS_3\n+ 0x003f2728 5f626936 62696e64 5f744976 4e535f34 _bi6bind_tIvNS_4\n+ 0x003f2738 5f6d6669 336d6632 49763134 48617368 _mfi3mf2Iv14Hash\n+ 0x003f2748 53746174 69737469 63734936 564c7569 StatisticsI6VLui\n+ 0x003f2758 6e74494c 6a353132 4545456a 504e5341 ntILj512EEEjPNSA\n+ 0x003f2768 5f323561 7262735f 74687265 61647368 _25arbs_threadsh\n+ 0x003f2778 61726563 6f6e7472 6f6c5f74 4545454e arecontrol_tEEEN\n+ 0x003f2788 53335f35 6c697374 33494e53 335f3576 S3_5list3INS3_5v\n+ 0x003f2798 616c7565 49505341 5f45454e 53465f49 alueIPSA_EENSF_I\n+ 0x003f27a8 6a45454e 53465f49 53435f45 45454545 jEENSF_ISC_EEEEE\n+ 0x003f27b8 45454545 45000000 4e35626f 6f737436 EEEEE...N5boost6\n+ 0x003f27c8 64657461 696c3138 73705f63 6f756e74 detail18sp_count\n+ 0x003f27d8 65645f69 6d706c5f 70644950 4e535f32 ed_impl_pdIPNS_2\n+ 0x003f27e8 696f3138 62617369 635f616c 74737472 io18basic_altstr\n+ 0x003f27f8 696e6762 75664963 53743131 63686172 ingbufIcSt11char\n+ 0x003f2808 5f747261 69747349 63455361 49634545 _traitsIcESaIcEE\n+ 0x003f2818 454e5332 5f323262 61736963 5f6f616c ENS2_22basic_oal\n+ 0x003f2828 74737472 696e6773 74726561 6d496353 tstringstreamIcS\n+ 0x003f2838 355f5336 5f45354e 6f5f4f70 45454500 5_S6_E5No_OpEEE.\n+ 0x003f2848 41434754 41434754 41434754 41434754 ACGTACGTACGTACGT\n+ 0x003f2858 ffffff00 00000000 53484653 3a090000 ........SHFS:...\n+ 0x003f2868 09656f20 00000000 09252000 096e6820 .eo .....% ..nh \n+ 0x003f2878 00000000 09736720 00000000 09776720 .....sg .....wg \n+ 0x003f2888 00000000 09626166 20000000 096e7270 .....baf ....nrp\n+ 0x003f2898 20000000 09727020 00000000 09723164 ....rp .....r1d\n+ 0x003f28a8 20000000 09723264 20000000 4d57533a ....r2d ...MWS:\n+ 0x003f28b8 09000000 0974616b 20000000 09736720 .....tak ....sg \n+ 0x003f28c8 20000000 09776720 20000000 09726570 ....wg ....rep\n+ 0x003f28d8 20000000 09666c6c 20000000 09666c65 ....fll ....fle\n+ 0x003f28e8 20000000 61647365 3a206964 313a2000 ...adse: id1: .\n+ 0x003f28f8 20696432 3a200000 206c6531 3a200000 id2: .. le1: ..\n+ 0x003f2908 20726531 3a200000 206c6532 3a200000 re1: .. le2: ..\n+ 0x003f2918 20726532 3a200000 206c6e31 3a200000 re2: .. ln1: ..\n+ 0x003f2928 206c6e32 3a200000 20746c3a 20000000 ln2: .. tl: ...\n+ 0x003f2938 206f6c3a 20000000 20647231 3a200000 ol: ... dr1: ..\n+ 0x003f2948 20647232 3a200000 766f6964 20536b69 dr2: ..void Ski\n+ 0x003f2958 6d3c5456 48415348 5f543e3a 3a747261 m::tra\n+ 0x003f2968 6e73666f 726d5365 71546f56 61726961 nsformSeqToVaria\n+ 0x003f2978 626c6548 61736820 282e2e2e 29000000 bleHash (...)...\n+ 0x003f2988 766f6964 20536b69 6d3c5456 48415348 void Skim::getOverlapC\n+ 0x003f29a8 72697465 72696f6e 4c657665 6c28636f riterionLevel(co\n+ 0x003f29b8 6e737420 75696e74 33322061 63747265 nst uint32 actre\n+ 0x003f29c8 61646964 2c20636f 6e737420 75696e74 adid, const uint\n+ 0x003f29d8 38207365 71747970 652c2063 6f6e7374 8 seqtype, const\n+ 0x003f29e8 20414453 45737469 6d61746f 72202620 ADSEstimator & \n+ 0x003f29f8 61647365 2c20636f 6e737420 75696e74 adse, const uint\n+ 0x003f2a08 38207265 6c73636f 72652c20 75696e74 8 relscore, uint\n+ 0x003f2a18 38202620 6c657665 6c6c2c20 75696e74 8 & levell, uint\n+ 0x003f2a28 38202620 6c657665 6c722900 75696e74 8 & levelr).uint\n+ 0x003f2a38 33322053 6b696d3c 54564841 53485f54 32 Skim::skimGo( ... )\n+ 0x003f2a58 00000000 75696e74 33322053 6b696d3c ....uint32 Skim<\n+ 0x003f2a68 54564841 53485f54 3e3a3a63 6f6d7075 TVHASH_T>::compu\n+ 0x003f2a78 74655061 72746974 696f6e28 75696e74 tePartition(uint\n+ 0x003f2a88 3332206d 61786d65 6d757361 67652c20 32 maxmemusage, \n+ 0x003f2a98 626f6f6c 20636f6d 70757465 6e756d70 bool computenump\n+ 0x003f2aa8 61727469 74696f6e 73290000 766f6964 artitions)..void\n+ 0x003f2ab8 20536b69 6d3c5456 48415348 5f543e3a Skim:\n+ 0x003f2ac8 3a73656c 65637450 6f74656e 7469616c :selectPotential\n+ 0x003f2ad8 48697473 466f7253 61766532 28636f6e HitsForSave2(con\n+ 0x003f2ae8 73742069 6e743820 64697265 6374696f st int8 directio\n+ 0x003f2af8 6e2c2063 6f6e7374 2075696e 74333220 n, const uint32 \n+ 0x003f2b08 61637472 65616469 642c2063 66685f74 actreadid, cfh_t\n+ 0x003f2b18 68726561 64646174 615f7420 26206366 hreaddata_t & cf\n+ 0x003f2b28 68642900 766f6964 20536b69 6d3c5456 hd).void Skim::threadl\n+ 0x003f2b48 6f6f7028 636f6e73 74207569 6e743332 oop(const uint32\n+ 0x003f2b58 20746872 6561646e 72290000 766f6964 threadnr)..void\n+ 0x003f2b68 20536b69 6d3c5456 48415348 5f543e3a Skim:\n+ 0x003f2b78 3a707572 6765556e 6e656365 73736172 :purgeUnnecessar\n+ 0x003f2b88 79486974 7346726f 6d536b69 6d46696c yHitsFromSkimFil\n+ 0x003f2b98 65287374 643a3a73 7472696e 67202620 e(std::string & \n+ 0x003f2ba8 66696c65 6e616d65 2c20636f 6e737420 filename, const \n+ 0x003f2bb8 696e7438 20726964 32646972 2c207374 int8 rid2dir, st\n+ 0x003f2bc8 643a3a76 6563746f 723c7569 6e74383e d::vector\n+ 0x003f2bd8 20262070 726d6174 63686573 29000000 & prmatches)...\n+ 0x003f2be8 766f6964 20536b69 6d3c5456 48415348 void Skim::findPerfect\n+ 0x003f2c08 5261696c 4d617463 68657349 6e536b69 RailMatchesInSki\n+ 0x003f2c18 6d46696c 65287374 643a3a73 7472696e mFile(std::strin\n+ 0x003f2c28 67202620 66696c65 6e616d65 2c20636f g & filename, co\n+ 0x003f2c38 6e737420 696e7438 20726964 32646972 nst int8 rid2dir\n+ 0x003f2c48 2c207374 643a3a76 6563746f 723c7569 , std::vector & prmatches\n+ 0x003f2c68 29000000 766f6964 20536b69 6d3c5456 )...void Skim::purgeMa\n+ 0x003f2c88 74636846 696c6549 664e6565 64656428 tchFileIfNeeded(\n+ 0x003f2c98 696e7438 20646972 65637469 6f6e2900 int8 direction).\n+ 0x003f2ca8 696e7433 3220536b 696d3c54 56484153 int32 Skim::findAdapto\n+ 0x003f2cc8 72526967 6874436c 69702852 65616420 rRightClip(Read \n+ 0x003f2cd8 26206163 74726561 642c2075 696e7433 & actread, uint3\n+ 0x003f2ce8 32206d69 6e686173 6865732e 20696e74 2 minhashes. int\n+ 0x003f2cf8 33322074 68726561 64696429 00000000 32 threadid)....\n+ 0x003f2d08 696e6c69 6e652062 6f6f6c20 63686563 inline bool chec\n+ 0x003f2d18 6b496642 616e6e65 64287569 6e743332 kIfBanned(uint32\n+ 0x003f2d28 20696431 2c207569 6e743332 20696432 id1, uint32 id2\n+ 0x003f2d38 29000000 626f6f73 743a3a63 6f6e6469 )...boost::condi\n+ 0x003f2d48 74696f6e 5f766172 6961626c 655f616e tion_variable_an\n+ 0x003f2d58 793a3a7e 636f6e64 6974696f 6e5f7661 y::~condition_va\n+ 0x003f2d68 72696162 6c655f61 6e792829 00000000 riable_any()....\n+ 0x003f2d78 626f6f73 743a3a63 6f6e6469 74696f6e boost::condition\n+ 0x003f2d88 5f766172 6961626c 655f616e 793a3a63 _variable_any::c\n+ 0x003f2d98 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n+ 0x003f2da8 655f616e 79282920 6661696c 65642069 e_any() failed i\n+ 0x003f2db8 6e207074 68726561 645f6d75 7465785f n pthread_mutex_\n+ 0x003f2dc8 696e6974 00000000 626f6f73 743a3a63 init....boost::c\n+ 0x003f2dd8 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n+ 0x003f2de8 655f616e 793a3a63 6f6e6469 74696f6e e_any::condition\n+ 0x003f2df8 5f766172 6961626c 655f616e 79282900 _variable_any().\n+ 0x003f2e08 626f6f73 743a3a63 6f6e6469 74696f6e boost::condition\n+ 0x003f2e18 5f766172 6961626c 655f616e 793a3a63 _variable_any::c\n+ 0x003f2e28 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n+ 0x003f2e38 655f616e 79282920 6661696c 65642069 e_any() failed i\n+ 0x003f2e48 6e207074 68726561 645f636f 6e645f69 n pthread_cond_i\n+ 0x003f2e58 6e697400 53746172 746c6576 656c3e3d nit.Startlevel>=\n+ 0x003f2e68 3230303f 20000000 09696431 3a200000 200? ....id1: ..\n+ 0x003f2e78 556e6b6e 6f776e2f 756e6861 6e646c65 Unknown/unhandle\n+ 0x003f2e88 64207365 71747970 65200000 69643120 d seqtype ..id1 \n+ 0x003f2e98 00000000 203e3d20 626f702e 73697a65 .... >= bop.size\n+ 0x003f2ea8 28292000 68617368 73617665 73746570 () .hashsavestep\n+ 0x003f2eb8 70696e67 203c2031 203f0000 20627020 ping < 1 ?.. bp \n+ 0x003f2ec8 6c6f6e67 20616e64 20746875 73206c6f long and thus lo\n+ 0x003f2ed8 6e676572 20746861 6e20534b 494d335f nger than SKIM3_\n+ 0x003f2ee8 4d415852 45414453 495a4541 4c4c4f57 MAXREADSIZEALLOW\n+ 0x003f2ef8 45442028 00000000 29206261 7365732e ED (....) bases.\n+ 0x003f2f08 20536b69 6d206361 6e6e6f74 2068616e Skim cannot han\n+ 0x003f2f18 646c6520 74686174 2c20736f 7272792e dle that, sorry.\n+ 0x003f2f28 00000000 7461676d 61736b76 6563746f ....tagmaskvecto\n+ 0x003f2f38 722e7369 7a652829 20000000 20213d20 r.size() ... != \n+ 0x003f2f48 736c656e 20000000 556e6b6e 6f776e20 slen ...Unknown \n+ 0x003f2f58 62617365 20270000 20696e20 5f434c49 base '.. in _CLI\n+ 0x003f2f68 50504544 5f207365 7175656e 63652000 PPED_ sequence .\n+ 0x003f2f78 536f6d65 7468696e 67277320 6e6f7420 Something's not \n+ 0x003f2f88 72696768 74206865 72652e00 20697320 right here.. is \n+ 0x003f2f98 6c6f6e67 65722074 68616e20 534b494d longer than SKIM\n+ 0x003f2fa8 335f4d41 58524541 4453495a 45414c4c 3_MAXREADSIZEALL\n+ 0x003f2fb8 4f574544 20280000 29206261 7365732e OWED (..) bases.\n+ 0x003f2fc8 20534b49 4d206361 6e6e6f74 2068616e SKIM cannot han\n+ 0x003f2fd8 646c6520 74686973 2c206162 6f727469 dle this, aborti\n+ 0x003f2fe8 6e672e0a 00000000 626f6f73 743a3a63 ng......boost::c\n+ 0x003f2ff8 6f6e6469 74696f6e 5f766172 6961626c ondition_variabl\n+ 0x003f3008 655f616e 793a3a77 61697428 29206661 e_any::wait() fa\n+ 0x003f3018 696c6564 20696e20 70746872 6561645f iled in pthread_\n+ 0x003f3028 636f6e64 5f776169 74000000 722b0000 cond_wait...r+..\n+ 0x003f3038 2f656c6f 672e736b 696d2e70 75682e00 /elog.skim.puh..\n+ 0x003f3048 0a536b69 6d3a2065 6c6f6720 00000000 .Skim: elog ....\n+ 0x003f3058 2f656c6f 672e736b 696d2e70 75682e63 /elog.skim.puh.c\n+ 0x003f3068 6f756e74 2e000000 0a536b69 6d3a2065 ount.....Skim: e\n+ 0x003f3078 6c6f6720 636f756e 74200000 0a747275 log count ...tru\n+ 0x003f3088 6e636174 696e6720 00000000 50757267 ncating ....Purg\n+ 0x003f3098 65643a09 00000000 09280000 4b657074 ed:......(..Kept\n+ 0x003f30a8 3a090000 436f756c 64206e6f 74207772 :...Could not wr\n+ 0x003f30b8 69746520 616e796d 6f726520 746f206e ite anymore to n\n+ 0x003f30c8 6f726d61 6c697365 6420736b 696d2066 ormalised skim f\n+ 0x003f30d8 696c652e 20446973 6b206675 6c6c3f20 ile. Disk full? \n+ 0x003f30e8 4368616e 67656420 7065726d 69737369 Changed permissi\n+ 0x003f30f8 6f6e733f 00000000 7472756e 63617465 ons?....truncate\n+ 0x003f3108 64200000 436f756c 64206e6f 74207472 d ..Could not tr\n+ 0x003f3118 756e6361 7465206e 6f726d61 6c697365 uncate normalise\n+ 0x003f3128 6420736b 696d2066 696c653f 20537472 d skim file? Str\n+ 0x003f3138 616e6765 202e2e2e 00000000 656e6f75 ange .......enou\n+ 0x003f3148 67680000 666e616d 652d3e65 6d707479 gh..fname->empty\n+ 0x003f3158 2829203f 3f3f0000 63616c6c 20746f20 () ???..call to \n+ 0x003f3168 656d7074 7920626f 6f73743a 3a66756e empty boost::fun\n+ 0x003f3178 6374696f 6e000000 766f6964 20626f6f ction...void boo\n+ 0x003f3188 73743a3a 636f6e64 6974696f 6e5f7661 st::condition_va\n+ 0x003f3198 72696162 6c655f61 6e793a3a 6e6f7469 riable_any::noti\n+ 0x003f31a8 66795f61 6c6c2829 00000000 74687265 fy_all()....thre\n+ 0x003f31b8 61646e72 3e3d534b 494d335f 66617263 adnr>=SKIM3_farc\n+ 0x003f31c8 645f7665 63746f72 2e73697a 6528293f d_vector.size()?\n+ 0x003f31d8 3f3f0000 766f6964 20626f6f 73743a3a ??..void boost::\n+ 0x003f31e8 636f6e64 6974696f 6e5f7661 72696162 condition_variab\n+ 0x003f31f8 6c655f61 6e793a3a 6e6f7469 66795f6f le_any::notify_o\n+ 0x003f3208 6e652829 00000000 4f6f6f6f 6f6f7073 ne()....Oooooops\n+ 0x003f3218 2c207472 79696e67 20746f20 75736520 , trying to use \n+ 0x003f3228 74687265 61642069 64200000 2c206275 thread id .., bu\n+ 0x003f3238 74207072 65706172 6564206f 6e6c7920 t prepared only \n+ 0x003f3248 666f7220 00000000 20746872 65616473 for .... threads\n+ 0x003f3258 3f3f3f00 2f656c6f 672e736b 696d2e73 ???./elog.skim.s\n+ 0x003f3268 61766532 2e000000 74616b65 6e3a0900 ave2....taken:..\n+ 0x003f3278 436f756c 64206e6f 74207772 69746520 Could not write \n+ 0x003f3288 616e796d 6f726520 746f2073 6b696d68 anymore to skimh\n+ 0x003f3298 69742073 61766535 2e204469 736b2066 it save5. Disk f\n+ 0x003f32a8 756c6c3f 20436861 6e676564 20706572 ull? Changed per\n+ 0x003f32b8 6d697373 696f6e73 3f000000 64726f70 missions?...drop\n+ 0x003f32c8 7065643a 09000000 74687265 61646e72 ped:....threadnr\n+ 0x003f32d8 3e3d534b 494d335f 63666864 5f766563 >=SKIM3_cfhd_vec\n+ 0x003f32e8 746f722e 73697a65 28293f3f 3f000000 tor.size()???...\n+ 0x003f32f8 436f756c 64206e6f 74207772 69746520 Could not write \n+ 0x003f3308 616e796d 6f726520 746f2073 6b696d68 anymore to skimh\n+ 0x003f3318 69742073 61766536 2e204469 736b2066 it save6. Disk f\n+ 0x003f3328 756c6c3f 20436861 6e676564 20706572 ull? Changed per\n+ 0x003f3338 6d697373 696f6e73 3f000000 706f7366 missions?...posf\n+ 0x003f3348 6d617463 686e616d 652e656d 70747928 matchname.empty(\n+ 0x003f3358 29203f3f 3f000000 706f7363 6d617463 ) ???...poscmatc\n+ 0x003f3368 686e616d 652e656d 70747928 29203f3f hname.empty() ??\n+ 0x003f3378 3f000000 4e6f7720 72756e6e 696e6720 ?...Now running \n+ 0x003f3388 74687265 61646564 20616e64 20706172 threaded and par\n+ 0x003f3398 74697469 6f6e6564 20736b69 6d6d6572 titioned skimmer\n+ 0x003f33a8 2d000000 20706172 74697469 6f6e7320 -... partitions \n+ 0x003f33b8 696e2000 20746872 65616473 3a000000 in . threads:...\n+ 0x003f33c8 0a0a4869 74732063 686f7365 6e3a2000 ..Hits chosen: .\n+ 0x003f33d8 4e35626f 6f737431 37626164 5f66756e N5boost17bad_fun\n+ 0x003f33e8 6374696f 6e5f6361 6c6c4500 4e35626f ction_callE.N5bo\n+ 0x003f33f8 6f737431 30777261 70657863 65707449 ost10wrapexceptI\n+ 0x003f3408 4e535f31 37626164 5f66756e 6374696f NS_17bad_functio\n+ 0x003f3418 6e5f6361 6c6c4545 45000000 4e35626f n_callEEE...N5bo\n+ 0x003f3428 6f737436 64657461 696c3131 74687265 ost6detail11thre\n+ 0x003f3438 61645f64 61746149 4e535f33 5f626936 ad_dataINS_3_bi6\n+ 0x003f3448 62696e64 5f74494e 53325f31 31756e73 bind_tINS2_11uns\n+ 0x003f3458 70656369 66696564 454e535f 3866756e pecifiedENS_8fun\n+ 0x003f3468 6374696f 6e494676 6a454545 4e53325f ctionIFvjEEENS2_\n+ 0x003f3478 356c6973 7431494e 53325f35 76616c75 5list1INS2_5valu\n+ 0x003f3488 65496a45 45454545 45454500 4e35626f eIjEEEEEEEE.N5bo\n+ 0x003f3498 6f737433 5f626936 62696e64 5f744976 ost3_bi6bind_tIv\n+ 0x003f34a8 4e535f34 5f6d6669 336d6631 49763453 NS_4_mfi3mf1Iv4S\n+ 0x003f34b8 6b696d49 79456a45 454e5330 5f356c69 kimIyEjEENS0_5li\n+ 0x003f34c8 73743249 4e53305f 3576616c 75654950 st2INS0_5valueIP\n+ 0x003f34d8 53355f45 454e535f 33617267 494c6931 S5_EENS_3argILi1\n+ 0x003f34e8 45454545 45454500 4e35626f 6f737436 EEEEEEE.N5boost6\n+ 0x003f34f8 64657461 696c3137 73705f63 6f756e74 detail17sp_count\n+ 0x003f3508 65645f69 6d706c5f 70494e53 305f3131 ed_impl_pINS0_11\n+ 0x003f3518 74687265 61645f64 61746149 4e535f33 thread_dataINS_3\n+ 0x003f3528 5f626936 62696e64 5f74494e 53335f31 _bi6bind_tINS3_1\n+ 0x003f3538 31756e73 70656369 66696564 454e535f 1unspecifiedENS_\n+ 0x003f3548 3866756e 6374696f 6e494676 6a454545 8functionIFvjEEE\n+ 0x003f3558 4e53335f 356c6973 7431494e 53335f35 NS3_5list1INS3_5\n+ 0x003f3568 76616c75 65496a45 45454545 45454545 valueIjEEEEEEEEE\n+ 0x003f3578 45000000 4e35626f 6f737433 5f626936 E...N5boost3_bi6\n+ 0x003f3588 62696e64 5f744976 4e535f34 5f6d6669 bind_tIvNS_4_mfi\n+ 0x003f3598 336d6631 49763453 6b696d49 36564c75 3mf1Iv4SkimI6VLu\n+ 0x003f35a8 696e7449 4c6a3132 38454545 6a45454e intILj128EEEjEEN\n+ 0x003f35b8 53305f35 6c697374 32494e53 305f3576 S0_5list2INS0_5v\n+ 0x003f35c8 616c7565 49505337 5f45454e 535f3361 alueIPS7_EENS_3a\n+ 0x003f35d8 7267494c 69314545 45454545 45000000 rgILi1EEEEEEE...\n+ 0x003f35e8 4e35626f 6f737433 5f626936 62696e64 N5boost3_bi6bind\n+ 0x003f35f8 5f744976 4e535f34 5f6d6669 336d6631 _tIvNS_4_mfi3mf1\n+ 0x003f3608 49763453 6b696d49 36564c75 696e7449 Iv4SkimI6VLuintI\n+ 0x003f3618 4c6a3235 36454545 6a45454e 53305f35 Lj256EEEjEENS0_5\n+ 0x003f3628 6c697374 32494e53 305f3576 616c7565 list2INS0_5value\n+ 0x003f3638 49505337 5f45454e 535f3361 7267494c IPS7_EENS_3argIL\n+ 0x003f3648 69314545 45454545 45000000 4e35626f i1EEEEEEE...N5bo\n+ 0x003f3658 6f737433 5f626936 62696e64 5f744976 ost3_bi6bind_tIv\n+ 0x003f3668 4e535f34 5f6d6669 336d6631 49763453 NS_4_mfi3mf1Iv4S\n+ 0x003f3678 6b696d49 36564c75 696e7449 4c6a3531 kimI6VLuintILj51\n+ 0x003f3688 32454545 6a45454e 53305f35 6c697374 2EEEjEENS0_5list\n+ 0x003f3698 32494e53 305f3576 616c7565 49505337 2INS0_5valueIPS7\n+ 0x003f36a8 5f45454e 535f3361 7267494c 69314545 _EENS_3argILi1EE\n+ 0x003f36b8 45454545 45000000 ffffff00 00000000 EEEEE...........\n+ 0x003f36c8 73797374 656d0000 0a0a4f55 43482120 system....OUCH! \n+ 0x003f36d8 736f6d65 7468696e 67207374 72616e67 something strang\n+ 0x003f36e8 65202e2e 2e207472 69656420 6d6f7265 e ... tried more\n+ 0x003f36f8 20746861 6e203130 30206465 6c657465 than 100 delete\n+ 0x003f3708 73206f66 20000000 202e2e2e 206c6973 s of ... ... lis\n+ 0x003f3718 74207369 7a652069 73200000 0a0a4f55 t size is ....OU\n+ 0x003f3728 43482120 736f6d65 7468696e 67207765 CH! something we\n+ 0x003f3738 69726420 2e2e2e20 74726965 64206d6f ird ... tried mo\n+ 0x003f3748 72652074 68616e20 31323030 2064656c re than 1200 del\n+ 0x003f3758 65746573 206f6620 00000000 5765276c etes of ....We'l\n+ 0x003f3768 6c207374 6f702074 68617420 68657265 l stop that here\n+ 0x003f3778 2e0a0000 5741524e 494e473a 20436f75 ....WARNING: Cou\n+ 0x003f3788 6c64206e 6f742064 656c6574 65206f6c ld not delete ol\n+ 0x003f3798 64206669 6c652000 0a546869 73206361 d file ..This ca\n+ 0x003f37a8 6e206861 76652061 206e756d 62657220 n have a number \n+ 0x003f37b8 6f662064 69666665 72656e74 20726561 of different rea\n+ 0x003f37c8 736f6e73 2c206e6f 6e65206f 66207468 sons, none of th\n+ 0x003f37d8 656d0000 0a776172 72616e74 696e6720 em...warranting \n+ 0x003f37e8 616e2061 626f7274 2c206275 74207468 an abort, but th\n+ 0x003f37f8 69732069 73207374 72616e67 6520616e is is strange an\n+ 0x003f3808 79776179 2e0a0a00 2f746572 6d696e61 yway..../termina\n+ 0x003f3818 74650000 6d762000 2f746572 6d696e61 te..mv ./termina\n+ 0x003f3828 74655f61 636b6e6f 776c6564 67656400 te_acknowledged.\n+ 0x003f3838 4d61726b 696e6720 706f7373 69626c79 Marking possibly\n+ 0x003f3848 206d6973 61737365 6d626c65 64207265 misassembled re\n+ 0x003f3858 70656174 733a2000 646f6e65 20737465 peats: .done ste\n+ 0x003f3868 7020312c 20737461 7274696e 67207374 p 1, starting st\n+ 0x003f3878 65702032 3a000000 0a466f75 6e640a00 ep 2:....Found..\n+ 0x003f3888 202d2000 206e6577 20537472 6f6e6720 - . new Strong \n+ 0x003f3898 524d4220 2853524d 63290a00 206e6577 RMB (SRMc).. new\n+ 0x003f38a8 20576561 6b20524d 42202857 524d6329 Weak RMB (WRMc)\n+ 0x003f38b8 0a000000 20534e50 0a706f73 6974696f .... SNP.positio\n+ 0x003f38c8 6e732074 61676765 642e0000 646f6e65 ns tagged...done\n+ 0x003f38d8 2e20466f 756e6420 6e6f6e65 2e000000 . Found none....\n+ 0x003f38e8 766f6964 20417373 656d626c 793a3a72 void Assembly::r\n+ 0x003f38f8 65667265 7368436f 6e746967 416e6452 efreshContigAndR\n+ 0x003f3908 65616470 6f6f6c56 616c7565 73416674 eadpoolValuesAft\n+ 0x003f3918 65724c6f 6164696e 67285265 6164506f erLoading(ReadPo\n+ 0x003f3928 6f6c2026 2072702c 20737464 3a3a6c69 ol & rp, std::li\n+ 0x003f3938 73743c43 6f6e7469 673e2026 20636f6e st & con\n+ 0x003f3948 74696773 2c207569 6e743820 6e616777 tigs, uint8 nagw\n+ 0x003f3958 61726e5f 74656d70 6c617465 70726f62 arn_templateprob\n+ 0x003f3968 6c656d73 29000000 0a0a3d3d 3d3d3d3d lems).....======\n+ 0x003f3978 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003f3988 3d3d3d3d 204d656d 6f727920 73656c66 ==== Memory self\n+ 0x003f3998 20617373 6573736d 656e7420 3d3d3d3d assessment ====\n 0x003f39a8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x003f39b8 3d3d0a00 52756e6e 696e6720 696e2033 ==..Running in 3\n- 0x003f39c8 32206269 74206d6f 64652e0a 0a000000 2 bit mode......\n- 0x003f39d8 2f70726f 632f6d65 6d696e66 6f000000 /proc/meminfo...\n- 0x003f39e8 2f70726f 632f7365 6c662f73 74617475 /proc/self/statu\n- 0x003f39f8 73000000 0a496e66 6f726d61 74696f6e s....Information\n- 0x003f3a08 206f6e20 63757272 656e7420 61737365 on current asse\n- 0x003f3a18 6d626c79 206f626a 6563743a 0a0a0000 mbly object:....\n- 0x003f3a28 41535f72 65616470 6f6f6c3a 20000000 AS_readpool: ...\n- 0x003f3a38 41535f63 6f6e7469 67733a20 00000000 AS_contigs: ....\n- 0x003f3a48 20636f6e 74696773 2e0a0000 41535f62 contigs....AS_b\n- 0x003f3a58 62636f6e 74696773 3a200000 4d656d20 bcontigs: ..Mem \n- 0x003f3a68 75736564 20666f72 20726561 64733a20 used for reads: \n- 0x003f3a78 00000000 290a0a4d 656d6f72 79207573 ....)..Memory us\n- 0x003f3a88 65642069 6e206173 73656d62 6c792073 ed in assembly s\n- 0x003f3a98 74727563 74757265 733a0a00 4566662e tructures:..Eff.\n- 0x003f3aa8 2053697a 65000000 46726565 20636170 Size...Free cap\n- 0x003f3ab8 2e000000 4c6f7374 4279416c 69676e00 ....LostByAlign.\n- 0x003f3ac8 41535f77 72697474 656e736b 696d6869 AS_writtenskimhi\n- 0x003f3ad8 74737065 7269643a 20000000 41535f73 tsperid: ...AS_s\n- 0x003f3ae8 6b696d5f 65646765 733a2000 41535f61 kim_edges: .AS_a\n- 0x003f3af8 64736661 6374733a 20000000 41535f63 dsfacts: ...AS_c\n- 0x003f3b08 6f6e6669 726d6564 5f656467 65733a20 onfirmed_edges: \n- 0x003f3b18 00000000 41535f70 65726d61 6e656e74 ....AS_permanent\n- 0x003f3b28 5f6f7665 726c6170 5f62616e 733a2000 _overlap_bans: .\n- 0x003f3b38 41535f72 65616468 69746d69 73733a20 AS_readhitmiss: \n- 0x003f3b48 00000000 41535f72 65616468 6d636f76 ....AS_readhmcov\n- 0x003f3b58 65726564 3a200000 41535f63 6f756e74 ered: ..AS_count\n- 0x003f3b68 5f72686d 3a200000 41535f63 6c69706c _rhm: ..AS_clipl\n- 0x003f3b78 6566743a 20000000 41535f63 6c697072 eft: ...AS_clipr\n- 0x003f3b88 69676874 3a200000 41535f75 7365645f ight: ..AS_used_\n- 0x003f3b98 6964733a 20000000 41535f6d 756c7469 ids: ...AS_multi\n- 0x003f3ba8 636f7069 65733a20 00000000 41535f68 copies: ....AS_h\n- 0x003f3bb8 61736d63 6f766572 6c617073 3a200000 asmcoverlaps: ..\n- 0x003f3bc8 41535f6d 6178636f 76657261 67657265 AS_maxcoveragere\n- 0x003f3bd8 61636865 643a2000 41535f63 6f766572 ached: .AS_cover\n- 0x003f3be8 61676570 65727365 71747970 653a2000 ageperseqtype: .\n- 0x003f3bf8 41535f69 7374726f 75626c65 6d616b65 AS_istroublemake\n- 0x003f3c08 723a2000 41535f69 73646562 7269733a r: .AS_isdebris:\n- 0x003f3c18 20000000 41535f6e 65656461 6c6c6f76 ...AS_needallov\n- 0x003f3c28 65726c61 70733a20 00000000 41535f72 erlaps: ....AS_r\n- 0x003f3c38 65616473 666f7272 65706561 74726573 eadsforrepeatres\n- 0x003f3c48 6f6c7665 3a200000 41535f61 6c6c726d olve: ..AS_allrm\n- 0x003f3c58 62736f6b 3a200000 41535f70 726f6261 bsok: ..AS_proba\n- 0x003f3c68 626c6572 6d62736e 6f746f6b 3a200000 blermbsnotok: ..\n- 0x003f3c78 41535f77 65616b72 6d62736e 6f746f6b AS_weakrmbsnotok\n- 0x003f3c88 3a200000 41535f72 6561646d 61797461 : ..AS_readmayta\n- 0x003f3c98 6b65736b 696d3a20 00000000 41535f73 keskim: ....AS_s\n- 0x003f3ca8 6b696d73 74616b65 6e3a2000 41535f6e kimstaken: .AS_n\n- 0x003f3cb8 756d736b 696d6f76 65726c61 70733a20 umskimoverlaps: \n- 0x003f3cc8 00000000 41535f6e 756d6c65 66746578 ....AS_numleftex\n- 0x003f3cd8 74656e64 736b696d 733a2000 41535f72 tendskims: .AS_r\n- 0x003f3ce8 69676874 65787465 6e64736b 696d733a ightextendskims:\n- 0x003f3cf8 20000000 41535f73 6b696d6c 65667465 ...AS_skimlefte\n- 0x003f3d08 7874656e 64726174 696f3a20 00000000 xtendratio: ....\n- 0x003f3d18 41535f73 6b696d72 69676874 65787465 AS_skimrightexte\n- 0x003f3d28 6e647261 74696f3a 20000000 41535f73 ndratio: ...AS_s\n- 0x003f3d38 6b696d6d 65676168 7562733a 20000000 kimmegahubs: ...\n- 0x003f3d48 41535f75 73656474 6d706669 6c65733a AS_usedtmpfiles:\n- 0x003f3d58 20000000 546f7461 6c3a2000 0a0a3d3d ...Total: ...==\n- 0x003f3d68 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003f39b8 3d3d3d3d 3d3d3d3d 3d3d0a00 52756e6e ==========..Runn\n+ 0x003f39c8 696e6720 696e2033 32206269 74206d6f ing in 32 bit mo\n+ 0x003f39d8 64652e0a 0a000000 2f70726f 632f6d65 de....../proc/me\n+ 0x003f39e8 6d696e66 6f000000 2f70726f 632f7365 minfo.../proc/se\n+ 0x003f39f8 6c662f73 74617475 73000000 0a496e66 lf/status....Inf\n+ 0x003f3a08 6f726d61 74696f6e 206f6e20 63757272 ormation on curr\n+ 0x003f3a18 656e7420 61737365 6d626c79 206f626a ent assembly obj\n+ 0x003f3a28 6563743a 0a0a0000 41535f72 65616470 ect:....AS_readp\n+ 0x003f3a38 6f6f6c3a 20000000 41535f63 6f6e7469 ool: ...AS_conti\n+ 0x003f3a48 67733a20 00000000 20636f6e 74696773 gs: .... contigs\n+ 0x003f3a58 2e0a0000 41535f62 62636f6e 74696773 ....AS_bbcontigs\n+ 0x003f3a68 3a200000 4d656d20 75736564 20666f72 : ..Mem used for\n+ 0x003f3a78 20726561 64733a20 00000000 290a0a4d reads: ....)..M\n+ 0x003f3a88 656d6f72 79207573 65642069 6e206173 emory used in as\n+ 0x003f3a98 73656d62 6c792073 74727563 74757265 sembly structure\n+ 0x003f3aa8 733a0a00 4566662e 2053697a 65000000 s:..Eff. Size...\n+ 0x003f3ab8 46726565 20636170 2e000000 4c6f7374 Free cap....Lost\n+ 0x003f3ac8 4279416c 69676e00 41535f77 72697474 ByAlign.AS_writt\n+ 0x003f3ad8 656e736b 696d6869 74737065 7269643a enskimhitsperid:\n+ 0x003f3ae8 20000000 41535f73 6b696d5f 65646765 ...AS_skim_edge\n+ 0x003f3af8 733a2000 41535f61 64736661 6374733a s: .AS_adsfacts:\n+ 0x003f3b08 20000000 41535f63 6f6e6669 726d6564 ...AS_confirmed\n+ 0x003f3b18 5f656467 65733a20 00000000 41535f70 _edges: ....AS_p\n+ 0x003f3b28 65726d61 6e656e74 5f6f7665 726c6170 ermanent_overlap\n+ 0x003f3b38 5f62616e 733a2000 41535f72 65616468 _bans: .AS_readh\n+ 0x003f3b48 69746d69 73733a20 00000000 41535f72 itmiss: ....AS_r\n+ 0x003f3b58 65616468 6d636f76 65726564 3a200000 eadhmcovered: ..\n+ 0x003f3b68 41535f63 6f756e74 5f72686d 3a200000 AS_count_rhm: ..\n+ 0x003f3b78 41535f63 6c69706c 6566743a 20000000 AS_clipleft: ...\n+ 0x003f3b88 41535f63 6c697072 69676874 3a200000 AS_clipright: ..\n+ 0x003f3b98 41535f75 7365645f 6964733a 20000000 AS_used_ids: ...\n+ 0x003f3ba8 41535f6d 756c7469 636f7069 65733a20 AS_multicopies: \n+ 0x003f3bb8 00000000 41535f68 61736d63 6f766572 ....AS_hasmcover\n+ 0x003f3bc8 6c617073 3a200000 41535f6d 6178636f laps: ..AS_maxco\n+ 0x003f3bd8 76657261 67657265 61636865 643a2000 veragereached: .\n+ 0x003f3be8 41535f63 6f766572 61676570 65727365 AS_coverageperse\n+ 0x003f3bf8 71747970 653a2000 41535f69 7374726f qtype: .AS_istro\n+ 0x003f3c08 75626c65 6d616b65 723a2000 41535f69 ublemaker: .AS_i\n+ 0x003f3c18 73646562 7269733a 20000000 41535f6e sdebris: ...AS_n\n+ 0x003f3c28 65656461 6c6c6f76 65726c61 70733a20 eedalloverlaps: \n+ 0x003f3c38 00000000 41535f72 65616473 666f7272 ....AS_readsforr\n+ 0x003f3c48 65706561 74726573 6f6c7665 3a200000 epeatresolve: ..\n+ 0x003f3c58 41535f61 6c6c726d 62736f6b 3a200000 AS_allrmbsok: ..\n+ 0x003f3c68 41535f70 726f6261 626c6572 6d62736e AS_probablermbsn\n+ 0x003f3c78 6f746f6b 3a200000 41535f77 65616b72 otok: ..AS_weakr\n+ 0x003f3c88 6d62736e 6f746f6b 3a200000 41535f72 mbsnotok: ..AS_r\n+ 0x003f3c98 6561646d 61797461 6b65736b 696d3a20 eadmaytakeskim: \n+ 0x003f3ca8 00000000 41535f73 6b696d73 74616b65 ....AS_skimstake\n+ 0x003f3cb8 6e3a2000 41535f6e 756d736b 696d6f76 n: .AS_numskimov\n+ 0x003f3cc8 65726c61 70733a20 00000000 41535f6e erlaps: ....AS_n\n+ 0x003f3cd8 756d6c65 66746578 74656e64 736b696d umleftextendskim\n+ 0x003f3ce8 733a2000 41535f72 69676874 65787465 s: .AS_rightexte\n+ 0x003f3cf8 6e64736b 696d733a 20000000 41535f73 ndskims: ...AS_s\n+ 0x003f3d08 6b696d6c 65667465 7874656e 64726174 kimleftextendrat\n+ 0x003f3d18 696f3a20 00000000 41535f73 6b696d72 io: ....AS_skimr\n+ 0x003f3d28 69676874 65787465 6e647261 74696f3a ightextendratio:\n+ 0x003f3d38 20000000 41535f73 6b696d6d 65676168 ...AS_skimmegah\n+ 0x003f3d48 7562733a 20000000 41535f75 73656474 ubs: ...AS_usedt\n+ 0x003f3d58 6d706669 6c65733a 20000000 546f7461 mpfiles: ...Tota\n+ 0x003f3d68 6c3a2000 0a0a3d3d 3d3d3d3d 3d3d3d3d l: ...==========\n 0x003f3d78 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x003f3d88 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x003f3d98 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x003f3da8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d0a00 ==============..\n- 0x003f3db8 546d7020 64697265 63746f72 79206973 Tmp directory is\n- 0x003f3dc8 206e6f74 206f6e20 61204e46 53206d6f not on a NFS mo\n- 0x003f3dd8 756e742c 20676f6f 642e0a0a 00000000 unt, good.......\n- 0x003f3de8 0a4d616b 65207375 72652000 20697320 .Make sure . is \n- 0x003f3df8 2a4e4f54 2a206f6e 2061204e 4653206d *NOT* on a NFS m\n- 0x003f3e08 6f756e74 206f7220 656c7365 204d4952 ount or else MIR\n- 0x003f3e18 41207769 6c6c2072 756e202a 76657279 A will run *very\n- 0x003f3e28 2a20736c 6f776c79 2e0a0000 0a0a0a0a * slowly........\n- 0x003f3e38 0a574152 4e494e47 20574152 4e494e47 .WARNING WARNING\n- 0x003f3e48 20574152 4e494e47 210a0a49 74206c6f WARNING!..It lo\n- 0x003f3e58 6f6b7320 6c696b65 20746865 20646972 oks like the dir\n- 0x003f3e68 6563746f 7279204d 49524120 75736573 ectory MIRA uses\n- 0x003f3e78 20666f72 2074656d 706f7261 72792066 for temporary f\n- 0x003f3e88 696c6573 0a202020 20000000 0a697320 iles. ....is \n- 0x003f3e98 6f6e2061 204e4653 20284e65 74776f72 on a NFS (Networ\n- 0x003f3ea8 6b204669 6c652053 79737465 6d29206d k File System) m\n- 0x003f3eb8 6f756e74 2e205468 69732077 696c6c20 ount. This will \n- 0x003f3ec8 736c6f77 20646f77 6e204d49 5241202a slow down MIRA *\n- 0x003f3ed8 636f6e73 69646572 61626c79 2a0a2e2e considerably*...\n- 0x003f3ee8 2e206279 2061626f 75742061 20666163 . by about a fac\n- 0x003f3ef8 746f7220 6f662031 30210a0a 49662079 tor of 10!..If y\n- 0x003f3f08 6f752064 6f6e2774 2077616e 74207468 ou don't want th\n- 0x003f3f18 61742c20 796f7520 68617665 20746872 at, you have thr\n- 0x003f3f28 65652070 6f737369 62696c69 74696573 ee possibilities\n- 0x003f3f38 3a0a0a31 29205245 434f4d4d 454e4445 :..1) RECOMMENDE\n- 0x003f3f48 44212055 7365202d 44493a74 72742074 D! Use -DI:trt t\n- 0x003f3f58 6f207265 64697265 63742074 68652074 o redirect the t\n- 0x003f3f68 6d702064 69726563 746f7279 20736f6d mp directory som\n- 0x003f3f78 65776865 72652065 6c736520 6f6e2061 ewhere else on a\n- 0x003f3f88 0a202020 6c6f6361 6c206469 736b206f . local disk o\n- 0x003f3f98 72206576 656e2053 53442e0a 32292041 r even SSD..2) A\n- 0x003f3fa8 4c534f20 504f5353 49424c45 3a207075 LSO POSSIBLE: pu\n- 0x003f3fb8 74207468 65207768 6f6c6520 70726f6a t the whole proj\n- 0x003f3fc8 65637420 736f6d65 77686572 6520656c ect somewhere el\n- 0x003f3fd8 7365206f 6e20796f 75722066 696c6520 se on your file \n- 0x003f3fe8 73797374 656d2e0a 33292041 42534f4c system..3) ABSOL\n- 0x003f3ff8 5554454c 59204e4f 54205245 434f4d4d UTELY NOT RECOMM\n- 0x003f4008 454e4445 44204154 20414c4c 3a207573 ENDED AT ALL: us\n- 0x003f4018 6520222d 4e573a63 6e66733d 7761726e e \"-NW:cnfs=warn\n- 0x003f4028 2220746f 2074656c 6c204d49 5241206e \" to tell MIRA n\n- 0x003f4038 6f740a20 2020746f 2073746f 70207768 ot. to stop wh\n- 0x003f4048 656e2069 74206669 6e647320 74686520 en it finds the \n- 0x003f4058 746d7020 64697265 63746f72 79206f6e tmp directory on\n- 0x003f4068 204e4653 2e0a0a49 6620796f 7520646f NFS...If you do\n- 0x003f4078 206e6f74 206b6e6f 77207768 6174204e not know what N\n- 0x003f4088 46532069 7320616e 64207768 69636820 FS is and which \n- 0x003f4098 64697265 63746f72 7920746f 20757365 directory to use\n- 0x003f40a8 20696e20 222d4449 3a747274 222c2061 in \"-DI:trt\", a\n- 0x003f40b8 736b0a79 6f757220 6c6f6361 6c207379 sk.your local sy\n- 0x003f40c8 7374656d 2061646d 696e6973 74726174 stem administrat\n- 0x003f40d8 6f722074 6f206775 69646520 796f752e or to guide you.\n- 0x003f40e8 0a0a0000 546d7020 64697265 63746f72 ....Tmp director\n- 0x003f40f8 79206973 206f6e20 61204e46 53206d6f y is on a NFS mo\n- 0x003f4108 756e7420 2e2e2e20 62757420 77652064 unt ... but we d\n- 0x003f4118 6f6e2774 2077616e 74207468 61742e00 on't want that..\n- 0x003f4128 766f6964 20417373 656d626c 793a3a63 void Assembly::c\n- 0x003f4138 6865636b 466f724e 46534d6f 756e744f heckForNFSMountO\n- 0x003f4148 6e546d70 44697228 29000000 2e62696e nTmpDir()....bin\n- 0x003f4158 00000000 2e62696e 2e726564 75636564 .....bin.reduced\n- 0x003f4168 00000000 48756e74 696e6720 6a6f696e ....Hunting join\n- 0x003f4178 2073706f 696c6572 00000000 48535320 spoiler....HSS \n- 0x003f4188 41742065 6e643a20 00000000 5472616e At end: ....Tran\n- 0x003f4198 73666572 696e6720 72656164 7320746f sfering reads to\n- 0x003f41a8 20726561 64706f6f 6c2e0000 696e6465 readpool...inde\n- 0x003f41b8 783a2000 20677265 61746572 20746861 x: . greater tha\n- 0x003f41c8 6e204153 5f726561 64706f6f 6c2e7369 n AS_readpool.si\n- 0x003f41d8 7a652829 3a000000 2020286f 7574206f ze():... (out o\n- 0x003f41e8 6620626f 756e6473 29000000 636f6e73 f bounds)...cons\n- 0x003f41f8 74205265 61642026 20417373 656d626c t Read & Assembl\n- 0x003f4208 793a3a67 65745265 61642875 696e7433 y::getRead(uint3\n- 0x003f4218 3220696e 64657829 00000000 50726563 2 index)....Prec\n- 0x003f4228 6865636b 20666169 6c65643a 20000000 heck failed: ...\n- 0x003f4238 766f6964 20417373 656d626c 793a3a6d void Assembly::m\n- 0x003f4248 616b654e 65775265 6164506f 6f6c4672 akeNewReadPoolFr\n- 0x003f4258 6f6d436f 6e746967 73282900 506f7374 omContigs().Post\n- 0x003f4268 63686563 6b312066 61696c65 643a2000 check1 failed: .\n- 0x003f4278 506f7374 63686563 6b322066 61696c65 Postcheck2 faile\n- 0x003f4288 643a2000 436f756c 64206e6f 74206d61 d: .Could not ma\n- 0x003f4298 6b652073 75726520 74686174 2061206e ke sure that a n\n- 0x003f42a8 65656465 64206469 72656374 6f727920 eeded directory \n- 0x003f42b8 65786973 74732028 73656520 6c6f6720 exists (see log \n- 0x003f42c8 61626f76 6520666f 72206d6f 72652069 above for more i\n- 0x003f42d8 6e666f29 2c206162 6f727469 6e67204d nfo), aborting M\n- 0x003f42e8 4952412e 00000000 766f6964 20417373 IRA.....void Ass\n- 0x003f42f8 656d626c 793a3a65 6e737572 65537461 embly::ensureSta\n- 0x003f4308 6e646172 64446972 6563746f 72696573 ndardDirectories\n- 0x003f4318 28626f6f 6c207075 72676529 00000000 (bool purge)....\n- 0x003f4328 436f756c 64206e6f 74206d61 6b652073 Could not make s\n- 0x003f4338 75726520 74686174 20746865 204d4952 ure that the MIR\n- 0x003f4348 4120746d 70206469 72656374 6f727920 A tmp directory \n- 0x003f4358 65786973 74732c20 61626f72 74696e67 exists, aborting\n- 0x003f4368 2e000000 5f585858 58585800 436f756c ...._XXXXXX.Coul\n- 0x003f4378 64206e6f 74206372 65617465 20646972 d not create dir\n- 0x003f4388 6563746f 72792066 6f722074 656d706f ectory for tempo\n- 0x003f4398 72617279 204d4952 41206461 74612000 rary MIRA data .\n- 0x003f43a8 436f756c 64206e6f 74206372 65617465 Could not create\n- 0x003f43b8 204d4952 4120746d 70206469 72656374 MIRA tmp direct\n- 0x003f43c8 6f727920 22000000 223a2069 7320736f ory \"...\": is so\n- 0x003f43d8 6d652070 61727420 6f662074 68652070 me part of the p\n- 0x003f43e8 61746820 6e6f7420 65786973 74696e67 ath not existing\n- 0x003f43f8 206f7220 61636365 73732070 726f7465 or access prote\n- 0x003f4408 63746564 3f000000 53796d6c 696e6b20 cted?...Symlink \n- 0x003f4418 00000000 206e6f77 20706f69 6e74696e .... now pointin\n- 0x003f4428 6720746f 20000000 746d7000 4d41466d g to ...tmp.MAFm\n- 0x003f4438 65726765 3a20436f 756c6420 6e6f7420 erge: Could not \n- 0x003f4448 6f70656e 20686561 6465726d 61662000 open headermaf .\n- 0x003f4458 4d41466d 65726765 3a20436f 756c6420 MAFmerge: Could \n- 0x003f4468 6e6f7420 6f70656e 206e6577 6d616620 not open newmaf \n- 0x003f4478 00000000 4d41466d 65726765 3a20436f ....MAFmerge: Co\n- 0x003f4488 756c6420 6e6f7420 6f70656e 20626f64 uld not open bod\n- 0x003f4498 796d6166 20000000 4d41466d 65726765 ymaf ...MAFmerge\n- 0x003f44a8 3a20436f 756c6420 6e6f7420 66696e69 : Could not fini\n- 0x003f44b8 73682063 6f707969 6e672074 6f200000 sh copying to ..\n- 0x003f44c8 44696420 6e6f7420 66696e64 20000000 Did not find ...\n- 0x003f44d8 75696e74 33322041 7373656d 626c793a uint32 Assembly:\n- 0x003f44e8 3a6c7364 50617373 496e666f 28636f6e :lsdPassInfo(con\n- 0x003f44f8 73742073 74643a3a 73747269 6e672026 st std::string &\n- 0x003f4508 2066696c 656e616d 65290000 6e656761 filename)..nega\n- 0x003f4518 74697665 2076616c 75652069 6e200000 tive value in ..\n- 0x003f4528 20697320 6e6f7420 65787065 63746564 is not expected\n- 0x003f4538 00000000 436f756c 64206e6f 74207772 ....Could not wr\n- 0x003f4548 69746520 736e6170 73686f74 20726561 ite snapshot rea\n- 0x003f4558 64706f6f 6c3f0000 766f6964 20417373 dpool?..void Ass\n- 0x003f4568 656d626c 793a3a73 73645265 6164506f embly::ssdReadPo\n- 0x003f4578 6f6c2863 6f6e7374 20737464 3a3a7374 ol(const std::st\n- 0x003f4588 72696e67 20262066 696c656e 616d6529 ring & filename)\n- 0x003f4598 00000000 436f756c 64206e6f 74207772 ....Could not wr\n- 0x003f45a8 69746520 736e6170 73686f74 20616374 ite snapshot act\n- 0x003f45b8 70617373 3f000000 766f6964 20417373 pass?...void Ass\n- 0x003f45c8 656d626c 793a3a73 73645061 7373496e embly::ssdPassIn\n- 0x003f45d8 666f2863 6f6e7374 20737464 3a3a7374 fo(const std::st\n- 0x003f45e8 72696e67 20262066 696c656e 616d652c ring & filename,\n- 0x003f45f8 2075696e 74333220 61637470 61737329 uint32 actpass)\n- 0x003f4608 00000000 436f756c 64206e6f 74207772 ....Could not wr\n- 0x003f4618 69746520 736e6170 73686f74 206d6178 ite snapshot max\n- 0x003f4628 636f763f 00000000 766f6964 20417373 cov?....void Ass\n- 0x003f4638 656d626c 793a3a73 73644d61 78436f76 embly::ssdMaxCov\n- 0x003f4648 52656163 68656428 636f6e73 74207374 Reached(const st\n- 0x003f4658 643a3a73 7472696e 67202620 66696c65 d::string & file\n- 0x003f4668 6e616d65 29000000 436f756c 64206e6f name)...Could no\n- 0x003f4678 74207772 69746520 736e6170 73686f74 t write snapshot\n- 0x003f4688 2062616e 6e656420 6f766572 6c617073 banned overlaps\n- 0x003f4698 3f000000 766f6964 20417373 656d626c ?...void Assembl\n- 0x003f46a8 793a3a73 73644261 6e6e6564 4f766572 y::ssdBannedOver\n- 0x003f46b8 6c617073 28636f6e 73742073 74643a3a laps(const std::\n- 0x003f46c8 73747269 6e672026 2066696c 656e616d string & filenam\n- 0x003f46d8 65290000 4572726f 72207768 696c6520 e)..Error while \n- 0x003f46e8 77726974 696e6720 66696c65 20000000 writing file ...\n- 0x003f46f8 2e204973 20746865 20646973 6b206675 . Is the disk fu\n- 0x003f4708 6c6c3f20 41726520 7065726d 69737369 ll? Are permissi\n- 0x003f4718 6f6e7320 72696768 743f0000 766f6964 ons right?..void\n- 0x003f4728 20417373 656d626c 793a3a73 61766552 Assembly::saveR\n- 0x003f4738 6573756d 65446174 614d4128 29000000 esumeDataMA()...\n- 0x003f4748 44796e61 6d696320 7320616c 6c6f6373 Dynamic s allocs\n- 0x003f4758 3a200000 44796e61 6d696320 6d20616c : ..Dynamic m al\n- 0x003f4768 6c6f6373 3a200000 416c6967 6e20616c locs: ..Align al\n- 0x003f4778 6c6f6373 3a200000 75696e74 33322041 locs: ..uint32 A\n- 0x003f4788 7373656d 626c793a 3a6c7364 4d617843 ssembly::lsdMaxC\n- 0x003f4798 6f765265 61636865 6428636f 6e737420 ovReached(const \n- 0x003f47a8 7374643a 3a737472 696e6720 26206669 std::string & fi\n- 0x003f47b8 6c656e61 6d652900 656d7074 79206c69 lename).empty li\n- 0x003f47c8 6e652069 6e200000 0a0a5365 61726368 ne in ....Search\n- 0x003f47d8 696e6720 666f7220 706f7373 69626c65 ing for possible\n- 0x003f47e8 206f7665 726c6170 73000000 20286f6e overlaps... (on\n- 0x003f47f8 6c792061 6761696e 73742062 61636b62 ly against backb\n- 0x003f4808 6f6e652c 20746865 2070726f 67726573 one, the progres\n- 0x003f4818 73206261 72207769 6c6c2062 6520736b s bar will be sk\n- 0x003f4828 65776564 29000000 5f6d6567 61687562 ewed)..._megahub\n- 0x003f4838 73000000 2e6c7374 00000000 0a0a5741 s....lst......WA\n- 0x003f4848 524e494e 47212121 2121210a 596f7520 RNING!!!!!!.You \n- 0x003f4858 61726520 6e6f7420 70657266 6f726d69 are not performi\n- 0x003f4868 6e672061 20276d61 7070696e 67206f6e ng a 'mapping on\n- 0x003f4878 6c792720 61737365 6d626c79 20616e64 ly' assembly and\n- 0x003f4888 20746865 20706172 616d6574 6572730a the parameters.\n- 0x003f4898 202d534b 3a627068 3d000000 20616e64 -SK:bph=... and\n- 0x003f48a8 202d534b 3a687373 3d000000 0a617265 -SK:hss=....are\n- 0x003f48b8 20717569 7465206c 6f772e20 49662053 quite low. If S\n- 0x003f48c8 4b494d20 74616b65 73206167 65732c20 KIM takes ages, \n- 0x003f48d8 73746f70 20746869 73206173 73656d62 stop this assemb\n- 0x003f48e8 6c792061 6e642072 65737461 72742077 ly and restart w\n- 0x003f48f8 68696c65 0a696e63 72656173 696e6720 hile.increasing \n- 0x003f4908 74686573 65207061 72616d65 74657273 these parameters\n- 0x003f4918 2e0a0a00 43616e6e 6f742070 6572666f ....Cannot perfo\n- 0x003f4928 726d2061 20736b69 6d20616e 616c7973 rm a skim analys\n- 0x003f4938 69732077 69746820 2d534b3a 62706820 is with -SK:bph \n- 0x003f4948 3e203235 36202879 6f752075 73656420 > 256 (you used \n- 0x003f4958 00000000 292c2074 686f7567 68204d49 ....), though MI\n- 0x003f4968 52412073 686f756c 64277665 20666169 RA should've fai\n- 0x003f4978 6c656420 6561726c 6965722c 20492061 led earlier, I a\n- 0x003f4988 646d6974 2e0a0000 766f6964 20417373 dmit....void Ass\n- 0x003f4998 656d626c 793a3a66 706f5f6d 61696e28 embly::fpo_main(\n- 0x003f49a8 696e7433 32207665 7273696f 6e2c2063 int32 version, c\n- 0x003f49b8 6f6e7374 20737464 3a3a7374 72696e67 onst std::string\n- 0x003f49c8 20707265 6669782c 20636f6e 73742073 prefix, const s\n- 0x003f49d8 74643a3a 73747269 6e672070 6f737466 td::string postf\n- 0x003f49e8 69782c20 636f6e73 74207374 643a3a73 ix, const std::s\n- 0x003f49f8 7472696e 6720746d 70666e61 6d652900 tring tmpfname).\n- 0x003f4a08 546f7461 6c206d65 67616875 62733a20 Total megahubs: \n- 0x003f4a18 00000000 0a0a4d49 52412068 61732064 ......MIRA has d\n- 0x003f4a28 65746563 74656420 6d656761 68756273 etected megahubs\n- 0x003f4a38 20696e20 796f7572 20646174 612e5468 in your data.Th\n- 0x003f4a48 6973206d 6179206e 6f742062 65206120 is may not be a \n- 0x003f4a58 70726f62 6c656d2c 20627574 206d6f73 problem, but mos\n- 0x003f4a68 74207072 6f626162 6c792069 732c2065 t probably is, e\n- 0x003f4a78 73706563 69616c6c 7920666f 72206575 specially for eu\n- 0x003f4a88 6b617279 6f746573 2e0a0a00 0a0a596f karyotes......Yo\n- 0x003f4a98 75206861 7665206d 6f726520 7468616e u have more than\n- 0x003f4aa8 20000000 25206f66 20796f75 72207265 ...% of your re\n- 0x003f4ab8 61647320 666f756e 6420746f 20626520 ads found to be \n- 0x003f4ac8 6d656761 68756273 2e0a0a59 6f752073 megahubs...You s\n- 0x003f4ad8 686f756c 64206368 65636b20 74686520 hould check the \n- 0x003f4ae8 666f6c6c 6f77696e 673a0a0a 09312920 following:...1) \n- 0x003f4af8 666f7220 53616e67 65722073 65717565 for Sanger seque\n- 0x003f4b08 6e636573 3a206172 6520616c 6c207468 nces: are all th\n- 0x003f4b18 65207365 7175656e 63696e67 20766563 e sequencing vec\n- 0x003f4b28 746f7273 206d6173 6b656420 2f20636c tors masked / cl\n- 0x003f4b38 69707065 643f0a09 32292066 6f722034 ipped?..2) for 4\n- 0x003f4b48 35342073 65717565 6e636573 3a206172 54 sequences: ar\n- 0x003f4b58 6520616c 6c207468 65206164 6170746f e all the adapto\n- 0x003f4b68 7273206d 61736b65 64202f20 636c6970 rs masked / clip\n- 0x003f4b78 7065643f 0a0a0000 596f7520 77696c6c ped?....You will\n- 0x003f4b88 2066696e 6420696e 20746865 20696e66 find in the inf\n- 0x003f4b98 6f206469 72656374 6f727920 61206669 o directory a fi\n- 0x003f4ba8 6c652063 616c6c65 640a2020 2020272a le called. '*\n- 0x003f4bb8 5f696e66 6f5f7265 61647265 70656174 _info_readrepeat\n- 0x003f4bc8 732e6c73 74272c0a 636f6e73 756c7420 s.lst',.consult \n- 0x003f4bd8 74686520 4d495241 206d616e 75616c20 the MIRA manual \n- 0x003f4be8 6f6e2068 6f772074 6f206578 74726163 on how to extrac\n- 0x003f4bf8 74207265 70656174 20696e66 6f726d61 t repeat informa\n- 0x003f4c08 74696f6e 2066726f 6d207468 6572652e tion from there.\n- 0x003f4c18 0a0a0000 546f206c 6561726e 206d6f72 ....To learn mor\n- 0x003f4c28 65206f6e 20746865 20747970 6573206f e on the types o\n- 0x003f4c38 66207265 70656174 7320796f 75206861 f repeats you ha\n- 0x003f4c48 76652061 6e642068 6f77204d 4952410a ve and how MIRA.\n- 0x003f4c58 2063616e 2068656c 7020796f 7520746f can help you to\n- 0x003f4c68 2066696e 64207468 656d2c20 706c6561 find them, plea\n- 0x003f4c78 73652063 6f6e7375 6c742074 6865206d se consult the m\n- 0x003f4c88 616e7561 6c206f6e 20746865 0a207573 anual on the. us\n- 0x003f4c98 61676520 6f66202d 48533a72 6c696966 age of -HS:rliif\n- 0x003f4ca8 20616e64 20746865 20746d70 2066696c and the tmp fil\n- 0x003f4cb8 65732074 68657920 63726561 74652e0a es they create..\n- 0x003f4cc8 00000000 2a4f4e4c 592a2077 68656e20 ....*ONLY* when \n- 0x003f4cd8 796f7520 61726520 73757265 20746861 you are sure tha\n- 0x003f4ce8 74206e6f 20286f72 206f6e6c 79206120 t no (or only a \n- 0x003f4cf8 76657279 206e6567 6c696769 626c6520 very negligible \n- 0x003f4d08 6e756d62 65722920 6f662073 65717565 number) of seque\n- 0x003f4d18 6e63696e 670a7665 63746f72 202f2061 ncing.vector / a\n- 0x003f4d28 64617074 6f722073 65717565 6e636520 daptor sequence \n- 0x003f4d38 69732072 656d6169 6e696e67 2c207472 is remaining, tr\n- 0x003f4d48 79207468 69733a0a 0a093329 20666f72 y this:...3) for\n- 0x003f4d58 206f7267 616e6973 6d732077 69746820 organisms with \n- 0x003f4d68 636f6d70 6c657820 72657065 61747320 complex repeats \n- 0x003f4d78 2865756b 6172796f 74732026 20736f6d (eukaryots & som\n- 0x003f4d88 65206261 63746572 6961293a 0a000000 e bacteria):....\n- 0x003f4d98 09092d20 75736520 2d48533a 6d6e723d ..- use -HS:mnr=\n- 0x003f4da8 7965730a 00000000 09092d20 72656475 yes.......- redu\n- 0x003f4db8 63652074 6865202d 48533a6e 72722070 ce the -HS:nrr p\n- 0x003f4dc8 6172616d 65746572 20286469 76696465 arameter (divide\n- 0x003f4dd8 20627920 32290a0a 2a4f4e4c 592a2069 by 2)..*ONLY* i\n- 0x003f4de8 66207468 65206162 6f766520 6661696c f the above fail\n- 0x003f4df8 732c2074 72792069 6e637265 6173696e s, try increasin\n- 0x003f4e08 67207468 65202d53 4b3a6d6d 68722070 g the -SK:mmhr p\n- 0x003f4e18 6172616d 65746572 0a4e6f74 65207468 arameter.Note th\n- 0x003f4e28 61742074 6865206e 756d6265 72206f66 at the number of\n- 0x003f4e38 20707265 73656e74 206d6567 61687562 present megahub\n- 0x003f4e48 73207769 6c6c2069 6e637265 61736520 s will increase \n- 0x003f4e58 636f6d70 75746174 696f6e20 74696d65 computation time\n- 0x003f4e68 20696e0a 616e2065 78706f6e 656e7469 in.an exponenti\n- 0x003f4e78 616c2077 61792c20 736f2062 65206361 al way, so be ca\n- 0x003f4e88 72656675 6c207768 656e2063 68616e67 reful when chang\n- 0x003f4e98 696e6720 2d534b3a 6d6d6872 2e0a0000 ing -SK:mmhr....\n- 0x003f4ea8 0a0a596f 75206861 76652000 25206f66 ..You have .% of\n- 0x003f4eb8 20796f75 72207265 61647320 6173206d your reads as m\n- 0x003f4ec8 65676168 7562732e 0a000000 596f7520 egahubs.....You \n- 0x003f4ed8 68617665 20736574 2061206d 6178696d have set a maxim\n- 0x003f4ee8 756d2061 6c6c6f77 65642072 6174696f um allowed ratio\n- 0x003f4ef8 206f663a 20000000 0a546f20 6368616e of: ....To chan\n- 0x003f4f08 67652074 68697320 72617469 6f2c2072 ge this ratio, r\n- 0x003f4f18 65616420 74686520 74657874 2061626f ead the text abo\n- 0x003f4f28 76652028 69742773 206b696e 64206f66 ve (it's kind of\n- 0x003f4f38 20696d70 6f727461 6e742920 616e6420 important) and \n- 0x003f4f48 616c736f 20736565 202d534b 3a6d6d68 also see -SK:mmh\n- 0x003f4f58 72206174 206d756c 7469706c 65206c6f r at multiple lo\n- 0x003f4f68 63617469 6f6e2069 6e207468 6520646f cation in the do\n- 0x003f4f78 63730a00 0a0a456e 64696e67 20746865 cs....Ending the\n- 0x003f4f88 20617373 656d626c 79206265 63617573 assembly becaus\n- 0x003f4f98 65207468 65206d61 78696d75 6d207261 e the maximum ra\n- 0x003f4fa8 74696f20 68617320 6265656e 20726561 tio has been rea\n- 0x003f4fb8 63686564 2f737572 70617373 65642e0a ched/surpassed..\n- 0x003f4fc8 00000000 736b696d 20646574 6563743a ....skim detect:\n- 0x003f4fd8 20000000 5f6d756c 7469636f 70797374 ..._multicopyst\n- 0x003f4fe8 61740000 4572726f 72207768 696c6520 at..Error while \n- 0x003f4ff8 72656164 696e6720 66696c65 20000000 reading file ...\n- 0x003f5008 2e204973 20746865 2066696c 65207072 . Is the file pr\n- 0x003f5018 6573656e 7420616e 6420636f 72726563 esent and correc\n- 0x003f5028 743f2041 72652070 65726d69 7373696f t? Are permissio\n- 0x003f5038 6e732072 69676874 3f000000 766f6964 ns right?...void\n- 0x003f5048 20417373 656d626c 793a3a6c 6f616452 Assembly::loadR\n- 0x003f5058 6573756d 65446174 6146504f 28290000 esumeDataFPO()..\n- 0x003f5068 2e6f6b00 41535f72 6573756d 65617365 .ok.AS_resumease\n- 0x003f5078 6d626c79 20000000 52657375 6d652061 mbly ...Resume a\n- 0x003f5088 7373656d 626c793a 20736b69 6d20616e ssembly: skim an\n- 0x003f5098 6420736b 696d2072 65647563 74696f6e d skim reduction\n- 0x003f50a8 20616c72 65616479 20707265 73656e74 already present\n- 0x003f50b8 2c20676f 6f642e0a 00000000 41535f72 , good......AS_r\n- 0x003f50c8 6573756d 6569736f 6b200000 66696c65 esumeisok ..file\n- 0x003f50d8 45786973 74732800 656c6f67 2e6f636c Exists(.elog.ocl\n- 0x003f50e8 6576656c 5f706173 73000000 70726f70 evel_pass...prop\n- 0x003f50f8 6f736564 20637574 6261636b 2031613a osed cutback 1a:\n- 0x003f5108 20000000 70726f70 6f736564 20637574 ...proposed cut\n- 0x003f5118 6261636b 2031623a 20000000 4e6f2062 back 1b: ...No b\n- 0x003f5128 61736573 20636c69 70706564 20696e20 ases clipped in \n- 0x003f5138 66697273 74207065 6320726f 756e642c first pec round,\n- 0x003f5148 20736b69 7070696e 67207365 636f6e64 skipping second\n- 0x003f5158 20726f75 6e642e0a 00000000 5072652d round......Pre-\n- 0x003f5168 61737365 6d626c79 20616c69 676e6d65 assembly alignme\n- 0x003f5178 6e742073 65617263 6820666f 72207265 nt search for re\n- 0x003f5188 61642065 7874656e 73696f6e 20616e64 ad extension and\n- 0x003f5198 202f206f 72207665 63746f72 20636c69 / or vector cli\n- 0x003f51a8 7070696e 673a0a00 5f707265 61737365 pping:.._preasse\n- 0x003f51b8 6d626c79 00000000 5f707265 61737365 mbly...._preasse\n- 0x003f51c8 6d626c79 31000000 5072652d 61737365 mbly1...Pre-asse\n- 0x003f51d8 6d626c79 20726561 64206578 74656e73 mbly read extens\n- 0x003f51e8 696f6e3a 0a000000 5072652d 61737365 ion:....Pre-asse\n- 0x003f51f8 6d626c79 20766563 746f7220 636c6970 mbly vector clip\n- 0x003f5208 70696e67 0a000000 5f707265 61737365 ping...._preasse\n- 0x003f5218 6d626c79 32000000 70726f70 6f736564 mbly2...proposed\n- 0x003f5228 20637574 6261636b 20707265 61737365 cutback preasse\n- 0x003f5238 6d626c79 3a200000 75736572 20646566 mbly: ..user def\n- 0x003f5248 696e6564 206b6d65 72207365 72696573 ined kmer series\n- 0x003f5258 2e0a0000 75736572 20646566 696e6564 ....user defined\n- 0x003f5268 206e756d 62657220 6f662070 61737365 number of passe\n- 0x003f5278 732e0a00 616c6c2d 6175746f 20646574 s...all-auto det\n- 0x003f5288 65726d69 6e617469 6f6e206f 66207061 ermination of pa\n- 0x003f5298 73736573 20616e64 206b6d65 72207365 sses and kmer se\n- 0x003f52a8 72696573 2e0a0000 4e756d62 6572206f ries....Number o\n- 0x003f52b8 66207061 73736573 20757365 64206279 f passes used by\n- 0x003f52c8 204d4952 413a2000 0a6b6d65 72207365 MIRA: ..kmer se\n- 0x003f52d8 72696573 3a200000 2c200000 44696769 ries: .., ..Digi\n- 0x003f52e8 74616c20 6e6f726d 616c6973 6174696f tal normalisatio\n- 0x003f52f8 6e207363 68656475 6c656420 666f7220 n scheduled for \n- 0x003f5308 70617373 20000000 766f6964 20417373 pass ...void Ass\n- 0x003f5318 656d626c 793a3a6c 73644261 6e6e6564 embly::lsdBanned\n- 0x003f5328 4f766572 6c617073 28636f6e 73742073 Overlaps(const s\n- 0x003f5338 74643a3a 73747269 6e672026 2066696c td::string & fil\n- 0x003f5348 656e616d 65290000 656d7074 79206669 ename)..empty fi\n- 0x003f5358 72737420 6c696e65 20696e20 00000000 rst line in ....\n- 0x003f5368 66697273 74206c69 6e652069 6e200000 first line in ..\n- 0x003f5378 2073686f 756c6420 68617665 206f6e65 should have one\n- 0x003f5388 20656c65 6d656e74 206f6e6c 79000000 element only...\n- 0x003f5398 4661756c 74792066 69727374 206c696e Faulty first lin\n- 0x003f53a8 652c2068 6173206e 65676174 69766520 e, has negative \n- 0x003f53b8 76616c75 65733a0a 00000000 4572726f values:.....Erro\n- 0x003f53c8 72207265 6164696e 67206669 72737420 r reading first \n- 0x003f53d8 6c696e65 206f6620 00000000 4f6f6f6f line of ....Oooo\n- 0x003f53e8 6f6f6f70 732c2066 69727374 206c696e ooops, first lin\n- 0x003f53f8 65207368 6f756c64 20686176 6520706f e should have po\n- 0x003f5408 73697469 7665206e 756d6265 723a2000 sitive number: .\n- 0x003f5418 4f6f6f6f 6f6f6f70 732c203a 2073697a Ooooooops, : siz\n- 0x003f5428 65206f66 20726561 6420706f 6f6c2069 e of read pool i\n- 0x003f5438 6e200000 29206973 206e6f74 20657175 n ..) is not equ\n- 0x003f5448 616c2074 6f207369 7a65206f 66206375 al to size of cu\n- 0x003f5458 7272656e 74207265 6164706f 6f6c2028 rrent readpool (\n- 0x003f5468 00000000 4661756c 7479206c 696e652c ....Faulty line,\n- 0x003f5478 206e6565 64206d6f 72652065 6c656d65 need more eleme\n- 0x003f5488 6e74733a 0a000000 4661756c 7479206c nts:....Faulty l\n- 0x003f5498 696e652c 20686173 206e6567 61746976 ine, has negativ\n- 0x003f54a8 65206669 72737420 76616c75 653a0a00 e first value:..\n- 0x003f54b8 4f6f6f6f 6f6f6f70 732c2066 69727374 Ooooooops, first\n- 0x003f54c8 2076616c 75652073 686f756c 64207661 value should va\n- 0x003f54d8 6c756520 3e3d2030 3a200000 4661756c lue >= 0: ..Faul\n- 0x003f54e8 7479206c 696e652c 20686173 206e6567 ty line, has neg\n- 0x003f54f8 61746976 65207661 6c756573 3a0a0000 ative values:...\n- 0x003f5508 766f6964 20417373 656d626c 793a3a6c void Assembly::l\n- 0x003f5518 6f616452 6573756d 65446174 614d4128 oadResumeDataMA(\n- 0x003f5528 29000000 436f756c 64206e6f 74206e6f )...Could not no\n- 0x003f5538 74206669 6e642064 69726563 746f7279 t find directory\n- 0x003f5548 20000000 20776869 6c652074 7279696e ... while tryin\n- 0x003f5558 6720746f 20726573 756d6520 74686520 g to resume the \n- 0x003f5568 61737365 6d626c79 2e204966 20796f75 assembly. If you\n- 0x003f5578 20696e74 656e6465 6420746f 20737461 intended to sta\n- 0x003f5588 72742061 206e6577 20617373 656d626c rt a new assembl\n- 0x003f5598 792c2064 6f206e6f 74207573 6520272d y, do not use '-\n- 0x003f55a8 72272028 72657375 6d652920 7768656e r' (resume) when\n- 0x003f55b8 20737461 7274696e 67204d49 52412e00 starting MIRA..\n- 0x003f55c8 41737365 6d626c79 3a3a4173 73656d62 Assembly::Assemb\n- 0x003f55d8 6c79284d 49524150 6172616d 65746572 ly(MIRAParameter\n- 0x003f55e8 73202a20 70617261 6d732900 20776869 s * params). whi\n- 0x003f55f8 6c652074 7279696e 6720746f 20726573 le trying to res\n- 0x003f5608 756d6520 74686520 61737365 6d626c79 ume the assembly\n- 0x003f5618 2e205265 73756d69 6e672069 7320696d . Resuming is im\n- 0x003f5628 706f7373 69626c65 2c20736f 7272792e possible, sorry.\n- 0x003f5638 00000000 436f756c 64206e6f 74206465 ....Could not de\n- 0x003f5648 6c657465 20616e64 20726563 72656174 lete and recreat\n- 0x003f5658 65207265 73756c74 73206469 72656374 e results direct\n- 0x003f5668 6f727920 7768696c 65207472 79696e67 ory while trying\n- 0x003f5678 20746f20 72657375 6d652061 6e206173 to resume an as\n- 0x003f5688 73656d62 6c793f00 54726965 6420746f sembly?.Tried to\n- 0x003f5698 20747261 6e736665 72207461 67732074 transfer tags t\n- 0x003f56a8 6f206262 61636b62 6f6e6520 636f6e74 o bbackbone cont\n- 0x003f56b8 69672072 65616420 66726f6d 3a0a0000 ig read from:...\n- 0x003f56c8 45786974 696e672e 0a000000 766f6964 Exiting.....void\n- 0x003f56d8 20417373 656d626c 793a3a74 72616e73 Assembly::trans\n- 0x003f56e8 66657243 6f6e7469 67526561 64546167 ferContigReadTag\n- 0x003f56f8 73546f52 65616470 6f6f6c28 636f6e73 sToReadpool(cons\n- 0x003f5708 7420436f 6e746967 20262063 6f6e2c20 t Contig & con, \n- 0x003f5718 636f6e73 74207374 643a3a6c 6973743c const std::list<\n- 0x003f5728 436f6e74 69673e3a 3a636f6e 73745f69 Contig>::const_i\n- 0x003f5738 74657261 746f7220 6262436f 6e746967 terator bbContig\n- 0x003f5748 49290000 54726965 6420746f 20747261 I)..Tried to tra\n- 0x003f5758 6e736665 72207461 67732074 6f207265 nsfer tags to re\n- 0x003f5768 6164706f 6f6c2072 65616420 66726f6d adpool read from\n- 0x003f5778 3a0a0000 45786974 696e672e 00000000 :...Exiting.....\n- 0x003f5788 4462673a 2077726f 6e672074 61672074 Dbg: wrong tag t\n- 0x003f5798 72616e73 66657220 666f7220 00000000 ransfer for ....\n- 0x003f57a8 47656e65 72616c20 6572726f 72207768 General error wh\n- 0x003f57b8 696c6520 7472616e 73666572 696e6720 ile transfering \n- 0x003f57c8 74616720 00000000 20746f20 72656164 tag .... to read\n- 0x003f57d8 706f6f6c 20726561 64206672 6f6d3a0a pool read from:.\n- 0x003f57e8 00000000 50657266 6f726d69 6e672073 ....Performing s\n- 0x003f57f8 6e617073 686f7420 00000000 436f756c napshot ....Coul\n- 0x003f5808 64206e6f 74206372 65617465 206e6577 d not create new\n- 0x003f5818 20736e61 7073686f 74206469 72656374 snapshot direct\n- 0x003f5828 6f72793f 20446973 6b206675 6c6c3f20 ory? Disk full? \n- 0x003f5838 6368616e 67656420 7065726d 69737369 changed permissi\n- 0x003f5848 6f6e733f 00000000 766f6964 20417373 ons?....void Ass\n- 0x003f5858 656d626c 793a3a70 6572666f 726d536e embly::performSn\n- 0x003f5868 61707368 6f742875 696e7433 32206163 apshot(uint32 ac\n- 0x003f5878 74706173 73290000 626f6f73 743a3a66 tpass)..boost::f\n- 0x003f5888 696c6573 79737465 6d3a3a64 69726563 ilesystem::direc\n- 0x003f5898 746f7279 5f656e74 72792620 626f6f73 tory_entry& boos\n- 0x003f58a8 743a3a66 696c6573 79737465 6d3a3a64 t::filesystem::d\n- 0x003f58b8 69726563 746f7279 5f697465 7261746f irectory_iterato\n- 0x003f58c8 723a3a64 65726566 6572656e 63652829 r::dereference()\n- 0x003f58d8 20636f6e 73740000 2f757372 2f696e63 const../usr/inc\n- 0x003f58e8 6c756465 2f626f6f 73742f66 696c6573 lude/boost/files\n- 0x003f58f8 79737465 6d2f6469 72656374 6f72792e ystem/directory.\n- 0x003f5908 68707000 28216973 5f656e64 28292926 hpp.(!is_end())&\n- 0x003f5918 26282261 7474656d 70742074 6f206465 &(\"attempt to de\n- 0x003f5928 72656665 72656e63 6520656e 64206469 reference end di\n- 0x003f5938 72656374 6f727920 69746572 61746f72 rectory iterator\n- 0x003f5948 22290000 436f756c 64206e6f 74207265 \")..Could not re\n- 0x003f5958 6e616d65 20636865 636b706f 696e7420 name checkpoint \n- 0x003f5968 64697265 63746f72 7920696e 20707265 directory in pre\n- 0x003f5978 70617261 74696f6e 206f6620 73617669 paration of savi\n- 0x003f5988 6e67206e 65772063 6865636b 706f696e ng new checkpoin\n- 0x003f5998 743f0a45 72726f72 206d6573 73616765 t?.Error message\n- 0x003f59a8 20697320 00000000 436f756c 64206e6f is ....Could no\n- 0x003f59b8 74207265 6e616d65 20636865 636b706f t rename checkpo\n- 0x003f59c8 696e7420 64697265 63746f72 7920696e int directory in\n- 0x003f59d8 20707265 70617261 74696f6e 206f6620 preparation of \n- 0x003f59e8 73617669 6e67206e 65772063 6865636b saving new check\n- 0x003f59f8 706f696e 743f0a55 6e737065 63696669 point?.Unspecifi\n- 0x003f5a08 65642065 78636570 74696f6e 3f000000 ed exception?...\n- 0x003f5a18 436f756c 64206e6f 7420726f 6c6c6261 Could not rollba\n- 0x003f5a28 636b2069 6e697469 616c2063 6865636b ck initial check\n- 0x003f5a38 706f696e 74207265 6e616d65 3f0a4572 point rename?.Er\n- 0x003f5a48 726f7220 6d657373 61676520 69732000 ror message is .\n- 0x003f5a58 436f756c 64206e6f 7420726f 6c6c6261 Could not rollba\n- 0x003f5a68 636b2069 6e697469 616c2063 6865636b ck initial check\n- 0x003f5a78 706f696e 74207265 6e616d65 3f0a556e point rename?.Un\n- 0x003f5a88 73706563 69666965 64206578 63657074 specified except\n- 0x003f5a98 696f6e3f 00000000 436f756c 64206e6f ion?....Could no\n- 0x003f5aa8 7420636f 72726563 746c7920 77726974 t correctly writ\n- 0x003f5ab8 65206e65 7720736e 61707368 6f742064 e new snapshot d\n- 0x003f5ac8 6174612e 20446973 6b206675 6c6c3f20 ata. Disk full? \n- 0x003f5ad8 4368616e 67656420 7065726d 69737369 Changed permissi\n- 0x003f5ae8 6f6e733f 00000000 4e6f772c 20746869 ons?....Now, thi\n- 0x003f5af8 73206973 20656d62 61726173 73696e67 s is embarassing\n- 0x003f5b08 3a20636f 756c6420 6e6f7420 64656c65 : could not dele\n- 0x003f5b18 74652066 61696c65 64206368 65636b70 te failed checkp\n- 0x003f5b28 6f696e74 20646972 6563746f 72792e20 oint directory. \n- 0x003f5b38 436f6e74 61637420 74686520 61757468 Contact the auth\n- 0x003f5b48 6f722e0a 4572726f 72206d65 73736167 or..Error messag\n- 0x003f5b58 65206973 20000000 4e6f772c 20746869 e is ...Now, thi\n- 0x003f5b68 73206973 20656d62 61726173 73696e67 s is embarassing\n- 0x003f5b78 3a20636f 756c6420 6e6f7420 64656c65 : could not dele\n- 0x003f5b88 74652066 61696c65 64206368 65636b70 te failed checkp\n- 0x003f5b98 6f696e74 20646972 6563746f 72792e20 oint directory. \n- 0x003f5ba8 436f6e74 61637420 74686520 61757468 Contact the auth\n- 0x003f5bb8 6f722e0a 6e556e73 70656369 66696564 or..nUnspecified\n- 0x003f5bc8 20657863 65707469 6f6e3f00 4e6f772c exception?.Now,\n- 0x003f5bd8 20746869 73206973 20656d62 61726173 this is embaras\n- 0x003f5be8 73696e67 3a20636f 756c6420 6e6f7420 sing: could not \n- 0x003f5bf8 726f6c6c 6261636b 20636865 636b706f rollback checkpo\n- 0x003f5c08 696e7420 72656e61 6d652061 66746572 int rename after\n- 0x003f5c18 20666169 6c656420 736e6170 73686f74 failed snapshot\n- 0x003f5c28 3f0a4572 726f7220 6d657373 61676520 ?.Error message \n- 0x003f5c38 69732000 4e6f772c 20746869 73206973 is .Now, this is\n- 0x003f5c48 20656d62 61726173 73696e67 3a20636f embarassing: co\n- 0x003f5c58 756c6420 6e6f7420 726f6c6c 6261636b uld not rollback\n- 0x003f5c68 20636865 636b706f 696e7420 72656e61 checkpoint rena\n- 0x003f5c78 6d652061 66746572 20666169 6c656420 me after failed \n- 0x003f5c88 736e6170 73686f74 3f0a556e 73706563 snapshot?.Unspec\n- 0x003f5c98 69666965 64206578 63657074 696f6e3f ified exception?\n- 0x003f5ca8 00000000 596f7520 73706563 69666965 ....You specifie\n- 0x003f5cb8 64202d43 4c3a6672 726e613d 7965732c d -CL:frrna=yes,\n- 0x003f5cc8 20627574 204d4952 4120636f 756c6420 but MIRA could \n- 0x003f5cd8 6e6f7420 66696e64 20746865 20646566 not find the def\n- 0x003f5ce8 61756c74 2072524e 41206861 73682073 ault rRNA hash s\n- 0x003f5cf8 74617469 73746963 73206669 6c652077 tatistics file w\n- 0x003f5d08 68696368 2073686f 756c6420 6265206c hich should be l\n- 0x003f5d18 6f636174 65642061 74200000 41737365 ocated at ..Asse\n- 0x003f5d28 6d626c79 3a3a6173 73656d62 6c652829 mbly::assemble()\n- 0x003f5d38 00000000 4e756d62 6572206f 6620524d ....Number of RM\n- 0x003f5d48 42206272 65616b20 6c6f6f70 73203c31 B break loops <1\n- 0x003f5d58 2c207365 7474696e 6720746f 20310a00 , setting to 1..\n- 0x003f5d68 53746172 74206f66 20626163 6b626f6e Start of backbon\n- 0x003f5d78 65207573 61676520 3e206e75 6d626572 e usage > number\n- 0x003f5d88 206f6620 70617373 65732c20 636f7272 of passes, corr\n- 0x003f5d98 65637469 6e672073 74617274 20746f20 ecting start to \n- 0x003f5da8 00000000 43616e27 74206669 6e642069 ....Can't find i\n- 0x003f5db8 6e666f20 61626f75 74207379 7374656d nfo about system\n- 0x003f5dc8 206f7220 70726f63 65737320 6d656d6f or process memo\n- 0x003f5dd8 72792c20 73776974 6368696e 67206f66 ry, switching of\n- 0x003f5de8 66206175 746f6d61 7469630a 6d656d6f f automatic.memo\n- 0x003f5df8 7279206d 616e6167 656d656e 742e0a00 ry management...\n- 0x003f5e08 3435342c 20536f6c 65786120 6f722049 454, Solexa or I\n- 0x003f5e18 6f6e546f 7272656e 74206461 74612070 onTorrent data p\n- 0x003f5e28 72657365 6e742c20 73776974 6368696e resent, switchin\n- 0x003f5e38 67206f66 66204741 50344441 20747970 g off GAP4DA typ\n- 0x003f5e48 65206f75 74707574 20726573 756c7473 e output results\n- 0x003f5e58 2028796f 75202a44 4f204e4f 542a2077 (you *DO NOT* w\n- 0x003f5e68 616e7420 6d696c6c 696f6e73 206f6620 ant millions of \n- 0x003f5e78 66696c65 7320696e 20612064 69726563 files in a direc\n- 0x003f5e88 746f7279 2c207265 616c6c79 2e290a00 tory, really.)..\n- 0x003f5e98 2d4f5554 3a6f7267 3d6e6f3a 6f74673d -OUT:org=no:otg=\n- 0x003f5ea8 6e6f3a6f 6574673d 6e6f0000 50524544 no:oetg=no..PRED\n- 0x003f5eb8 204d4158 54494420 00000000 2d44503a MAXTID ....-DP:\n- 0x003f5ec8 75726520 74616b65 73206566 66656374 ure takes effect\n- 0x003f5ed8 206f6e6c 7920666f 72205361 6e676572 only for Sanger\n- 0x003f5ee8 20736571 75656e63 65732e0a 00000000 sequences......\n- 0x003f5ef8 2d434c3a 70766c63 2074616b 65732065 -CL:pvlc takes e\n- 0x003f5f08 66666563 74206f6e 6c792066 6f722053 ffect only for S\n- 0x003f5f18 616e6765 72207365 7175656e 6365732e anger sequences.\n- 0x003f5f28 0a000000 596f7520 68617665 2073656c ....You have sel\n- 0x003f5f38 65637465 6420746f 20686176 65203020 ected to have 0 \n- 0x003f5f48 70617373 6573206f 6e207468 65206173 passes on the as\n- 0x003f5f58 73656d62 6c792c20 74686572 65666f72 sembly, therefor\n- 0x003f5f68 650a6a75 73742072 756e6e69 6e672061 e.just running a\n- 0x003f5f78 20636f75 706c6520 6f662068 61736820 couple of hash \n- 0x003f5f88 73746174 69737469 63732061 6e642069 statistics and i\n- 0x003f5f98 6e666f20 666f7220 72656164 20726570 nfo for read rep\n- 0x003f5fa8 65617473 2e0a2861 6c736f20 70657266 eats..(also perf\n- 0x003f5fb8 6f726d69 6e672072 61726520 6b6d6572 orming rare kmer\n- 0x003f5fc8 20636c69 70732069 66207769 73686564 clips if wished\n- 0x003f5fd8 290a0000 0a0a5061 73733a20 00000000 ).....Pass: ....\n- 0x003f5fe8 202f2000 72656665 72656e63 65207365 / .reference se\n- 0x003f5ff8 7175656e 6365203e 3d313620 4d422c20 quence >=16 MB, \n- 0x003f6008 666f7263 696e6720 6d696e69 6d756d20 forcing minimum \n- 0x003f6018 62706820 6f662031 312e0a00 72656665 bph of 11...refe\n- 0x003f6028 72656e63 65207365 7175656e 6365203e rence sequence >\n- 0x003f6038 3d323520 4d422c20 666f7263 696e6720 =25 MB, forcing \n- 0x003f6048 6d696e69 6d756d20 62706820 6f662031 minimum bph of 1\n- 0x003f6058 332e0a00 6d6f7265 20746861 6e203130 3...more than 10\n- 0x003f6068 6d207265 6164732c 20666f72 63696e67 m reads, forcing\n- 0x003f6078 206d696e 696d756d 20627068 206f6620 minimum bph of \n- 0x003f6088 31312e0a 00000000 6d6f7265 20746861 11......more tha\n- 0x003f6098 6e203135 6d207265 6164732c 20666f72 n 15m reads, for\n- 0x003f60a8 63696e67 206d696e 696d756d 20627068 cing minimum bph\n- 0x003f60b8 206f6620 31322e0a 00000000 6d6f7265 of 12......more\n- 0x003f60c8 20746861 6e203230 6d207265 6164732c than 20m reads,\n- 0x003f60d8 20666f72 63696e67 206d696e 696d756d forcing minimum\n- 0x003f60e8 20627068 206f6620 31332e0a 00000000 bph of 13......\n- 0x003f60f8 4175746f 6d617469 63202d53 4b3a6270 Automatic -SK:bp\n- 0x003f6108 68207365 7420746f 20000000 70617373 h set to ...pass\n- 0x003f6118 00000000 466f756e 64200000 20696e63 ....Found .. inc\n- 0x003f6128 6f727265 63746962 6c652072 65616420 orrectible read \n- 0x003f6138 656e6473 206f7220 706f7373 69626c65 ends or possible\n- 0x003f6148 20636869 6d657261 732e0a00 20746572 chimeras... ter\n- 0x003f6158 6d696e61 6c6c7920 696e636f 72726563 minally incorrec\n- 0x003f6168 7469626c 65207265 61647320 6f722070 tible reads or p\n- 0x003f6178 6f737369 626c6520 6368696d 65726173 ossible chimeras\n- 0x003f6188 2e0a0000 52657375 6d652061 7373656d ....Resume assem\n- 0x003f6198 626c793a 20616c69 676e6d65 6e747320 bly: alignments \n- 0x003f61a8 616c7265 61647920 70726573 656e742c already present,\n- 0x003f61b8 20676f6f 642e0a00 52657065 61747320 good...Repeats \n- 0x003f61c8 666f756e 64206475 72696e67 20636f6e found during con\n- 0x003f61d8 74696720 6275696c 64696e67 2c206164 tig building, ad\n- 0x003f61e8 64696e67 20616464 6974696f 6e616c20 ding additional \n- 0x003f61f8 616c6967 6e6d656e 74206974 65726174 alignment iterat\n- 0x003f6208 696f6e0a 666f7220 71756963 6b207265 ion.for quick re\n- 0x003f6218 70656174 20726573 6f6c7669 6e672e0a peat resolving..\n- 0x003f6228 00000000 72657065 61745f72 65736f6c ....repeat_resol\n- 0x003f6238 76650000 5365656e 20746572 6d696e61 ve..Seen termina\n- 0x003f6248 74696f6e 20726571 75657374 20627920 tion request by \n- 0x003f6258 75736572 0a000000 4368616e 67696e67 user....Changing\n- 0x003f6268 206e756d 62657220 6f662070 61737365 number of passe\n- 0x003f6278 73206672 6f6d2000 4e6f2066 75727468 s from .No furth\n- 0x003f6288 65722061 6374696f 6e206e65 63657373 er action necess\n- 0x003f6298 6172792c 2077696c 6c207465 726d696e ary, will termin\n- 0x003f62a8 61746520 616e7977 61792069 6e203220 ate anyway in 2 \n- 0x003f62b8 70617373 6573206d 61782e0a 00000000 passes max......\n- 0x003f62c8 4572726f 72207768 696c6520 6c6f6164 Error while load\n- 0x003f62d8 696e6720 736e6170 73686f74 206d6574 ing snapshot met\n- 0x003f62e8 61646174 612c2072 6573756d 696e6720 adata, resuming \n- 0x003f62f8 61737365 6d626c79 20697320 6e6f7420 assembly is not \n- 0x003f6308 706f7373 69626c65 2c20736f 7272790a possible, sorry.\n- 0x003f6318 00000000 74656d70 6c617465 203c636c ....template StringCon\n- 0x003f6338 7461696e 65723c54 3e3a3a45 6e747279 tainer::Entry\n- 0x003f6348 3c543e20 53747269 6e67436f 6e746169 StringContai\n- 0x003f6358 6e65723c 543e3a3a 61646445 6e747279 ner::addEntry\n- 0x003f6368 28636f6e 73742073 74643a3a 73747269 (const std::stri\n- 0x003f6378 6e672026 20732900 74656d70 6c617465 ng & s).template\n- 0x003f6388 203c636c 61737320 543e2053 7472696e Strin\n- 0x003f6398 67436f6e 7461696e 65723c54 3e3a3a45 gContainer::E\n- 0x003f63a8 6e747279 3c543e20 53747269 6e67436f ntry StringCo\n- 0x003f63b8 6e746169 6e65723c 543e3a3a 61646445 ntainer::addE\n- 0x003f63c8 6e747279 4e6f446f 75626c65 43686563 ntryNoDoubleChec\n- 0x003f63d8 6b28636f 6e737420 7374643a 3a737472 k(const std::str\n- 0x003f63e8 696e6720 26207329 00000000 696e6c69 ing & s)....inli\n- 0x003f63f8 6e652052 65616420 636f6e73 74202620 ne Read const & \n- 0x003f6408 506c6163 6564436f 6e746967 52656164 PlacedContigRead\n- 0x003f6418 733a3a63 6f6e7374 5f697465 7261746f s::const_iterato\n- 0x003f6428 723a3a64 65726566 6572656e 63652829 r::dereference()\n- 0x003f6438 20636f6e 73740000 54727969 6e672074 const..Trying t\n- 0x003f6448 6f206465 72656665 72656e63 6520616e o dereference an\n- 0x003f6458 20697465 7261746f 7220706f 696e7469 iterator pointi\n- 0x003f6468 6e672074 6f20656e 6428293f 3f3f0000 ng to end()???..\n- 0x003f6478 53432000 20697373 6f727465 64202800 SC . issorted (.\n- 0x003f6488 29206361 70616369 74792000 29207369 ) capacity .) si\n- 0x003f6498 7a652000 09726177 3a000000 096f3a00 ze ..raw:....o:.\n- 0x003f64a8 09737274 3a000000 436f756c 64206c6f .srt:...Could lo\n- 0x003f64b8 61642000 20656c65 6d656e74 732c2062 ad . elements, b\n- 0x003f64c8 75742066 696c6520 68617320 00000000 ut file has ....\n- 0x003f64d8 4f6f6f6f 70733f20 476f696e 6720746f Oooops? Going to\n- 0x003f64e8 20746872 6f772069 6e206164 64456e74 throw in addEnt\n- 0x003f64f8 72794e6f 446f7562 6c654368 65636b20 ryNoDoubleCheck \n- 0x003f6508 62656361 75736520 6f662074 6869733a because of this:\n- 0x003f6518 0a000000 54726965 6420746f 20616464 ....Tried to add\n- 0x003f6528 20270000 272c2062 7574206d 6178206e '..', but max n\n- 0x003f6538 756d6265 72206f66 20656e74 72696573 umber of entries\n- 0x003f6548 20280000 29207265 61636865 642e0a00 (..) reached...\n- 0x003f6558 4f6f6f6f 6f6f7073 3f205343 5f746865 Oooooops? SC_the\n- 0x003f6568 73747269 6e67732e 73697a65 28293d3d strings.size()==\n- 0x003f6578 3020616e 64207374 696c6c20 77616e74 0 and still want\n- 0x003f6588 20746f20 736f7274 3f3f3f00 4f6f6f6f to sort???.Oooo\n- 0x003f6598 70733f20 476f696e 6720746f 20746872 ps? Going to thr\n- 0x003f65a8 6f772069 6e206164 64456e74 72792062 ow in addEntry b\n- 0x003f65b8 65636175 7365206f 66207468 69733a20 ecause of this: \n- 0x003f65c8 00000000 4e35626f 6f737436 73797374 ....N5boost6syst\n- 0x003f65d8 656d3664 65746169 6c323173 79737465 em6detail21syste\n- 0x003f65e8 6d5f6572 726f725f 63617465 676f7279 m_error_category\n- 0x003f65f8 45000000 4e35626f 6f737439 616c676f E...N5boost9algo\n- 0x003f6608 72697468 6d366465 7461696c 3133746f rithm6detail13to\n- 0x003f6618 6b656e5f 66696e64 65724649 4e53315f ken_finderFINS1_\n- 0x003f6628 31306973 5f616e79 5f6f6646 49634545 10is_any_ofFIcEE\n- 0x003f6638 45450000 00000000 61000000 62000000 EE......a...b...\n- 0x003f6648 63000000 6a000000 07000000 21000000 c...j.......!...\n- 0x003f6658 0e000000 09000000 4a000000 20000000 ........J... ...\n- 0x003f6668 67000000 72000000 6f000000 68000000 g...r...o...h...\n- 0x003f6678 12000000 59000000 10000000 27000000 ....Y.......'...\n- 0x003f6688 08000000 11000000 1b000000 24000000 ............$...\n- 0x003f6698 26000000 71000000 2b000000 54000000 &...q...+...T...\n- 0x003f66a8 19000000 04000000 16000000 1d000000 ................\n- 0x003f66b8 05000000 15000000 5a000000 64000000 ........Z...d...\n- 0x003f66c8 66000000 65000000 69000000 0a000000 f...e...i.......\n- 0x003f66d8 43000000 25000000 3d000000 2a000000 C...%...=...*...\n- 0x003f66e8 5c000000 1c000000 3f000000 06000000 \\.......?.......\n- 0x003f66f8 13000000 02000000 03000000 14000000 ................\n- 0x003f6708 58000000 3c000000 6b000000 0c000000 X...<...k.......\n- 0x003f6718 5f000000 7d000000 73000000 01000000 _...}...s.......\n- 0x003f6728 5f000000 0b000000 82000000 0d000000 _...............\n- 0x003f6738 47000000 5d000000 1e000000 23000000 G...].......#...\n- 0x003f6748 0b000000 22000000 83000000 3e000000 ....\".......>...\n- 0x003f6758 1a000000 6e000000 17000000 18000000 ....n...........\n- 0x003f6768 1f000000 28000000 4b000000 5b000000 ....(...K...[...\n- 0x003f6778 11000000 1f000000 3f000000 7f000000 ........?.......\n- 0x003f6788 11000000 1f000000 3f000000 5f000000 ........?..._...\n- 0x003f6798 11000000 1f000000 35000000 4b000000 ........5...K...\n- 0x003f67a8 11000000 1f000000 35000000 11000000 ........5.......\n- 0x003f67b8 1b000000 25000000 11000000 15000000 ....%...........\n- 0x003f67c8 19000000 1f000000 11000000 13000000 ................\n- 0x003f67d8 15000000 17000000 11000000 15000000 ................\n- 0x003f67e8 1f000000 11000000 13000000 17000000 ................\n- 0x003f67f8 0a63636f 6e207469 6d696e67 733a2000 .ccon timings: .\n- 0x003f6808 0a636374 20707265 09000000 0a636374 .cct pre.....cct\n- 0x003f6818 20646972 09000000 0a636374 20786375 dir.....cct xcu\n- 0x003f6828 09000000 0a636374 20746d70 09000000 .....cct tmp....\n- 0x003f6838 0a636374 20737720 09000000 0a636374 .cct sw .....cct\n- 0x003f6848 20706963 09000000 0a636374 2069636f pic.....cct ico\n- 0x003f6858 09000000 0a636374 2069636d 09000000 .....cct icm....\n- 0x003f6868 0a636374 20757064 09000000 0a636374 .cct upd.....cct\n- 0x003f6878 2064656c 09000000 0a636374 20726d7a del.....cct rmz\n- 0x003f6888 09000000 0a636374 20676370 09000000 .....cct gcp....\n- 0x003f6898 0a63636f 6e206920 74696d69 6e677320 .ccon i timings \n- 0x003f68a8 28000000 0a636369 7420696e 73676c63 (....ccit insglc\n- 0x003f68b8 63090000 0a636369 7420696e 73676c61 c....ccit insgla\n- 0x003f68c8 726f0900 0a636369 7420696e 73676c61 ro...ccit insgla\n- 0x003f68d8 63740900 0a636369 7420696e 73676c74 ct...ccit insglt\n- 0x003f68e8 6f740900 0a636369 74207072 09090000 ot...ccit pr....\n- 0x003f68f8 0a636369 74207465 6d706c09 00000000 .ccit templ.....\n- 0x003f6908 0a636369 7420696e 64657809 00000000 .ccit index.....\n- 0x003f6918 0a636369 74206269 676c6363 696e7309 .ccit biglccins.\n- 0x003f6928 00000000 0a636369 74206269 676c696e .....ccit biglin\n- 0x003f6938 74657270 6f6c0900 0a636369 74206269 terpol...ccit bi\n- 0x003f6948 676c7570 64746167 73090000 0a636369 glupdtags....cci\n- 0x003f6958 74206269 676c6670 63726909 00000000 t biglfpcri.....\n- 0x003f6968 0a636369 74206269 676c6c67 61700900 .ccit bigllgap..\n- 0x003f6978 0a636369 74206269 676c7368 69667472 .ccit biglshiftr\n- 0x003f6988 65616409 00000000 0a636369 74206269 ead......ccit bi\n- 0x003f6998 676c746f 74090000 0a636369 7420696e gltot....ccit in\n- 0x003f69a8 73677209 00000000 0a636369 74207563 sgr......ccit uc\n- 0x003f69b8 76090000 0a63636f 6e206420 74696d69 v....ccon d timi\n- 0x003f69c8 6e677320 28000000 0a636364 74207562 ngs (....ccdt ub\n- 0x003f69d8 6c090000 0a636364 74207563 76090000 l....ccdt ucv...\n- 0x003f69e8 0a636364 74206974 66090000 0a636364 .ccdt itf....ccd\n- 0x003f69f8 74206974 62090000 0a636364 74206363 t itb....ccdt cc\n- 0x003f6a08 65660900 0a636364 74206363 65620900 ef...ccdt cceb..\n- 0x003f6a18 0a636364 74207364 74090000 0a636364 .ccdt sdt....ccd\n- 0x003f6a28 74207372 09090000 0a636364 7420736d t sr.....ccdt sm\n- 0x003f6a38 70090000 0a636364 74206474 09090000 p....ccdt dt....\n- 0x003f6a48 0a636364 74207272 09090000 0a636364 .ccdt rr.....ccd\n- 0x003f6a58 74206473 6f630900 0a636364 7420746f t dsoc...ccdt to\n- 0x003f6a68 74616c09 00000000 434f4e5f 616c6c61 tal.....CON_alla\n- 0x003f6a78 646a7573 746d656e 74732e65 6d707479 djustments.empty\n- 0x003f6a88 28293f00 696e7433 3220436f 6e746967 ()?.int32 Contig\n- 0x003f6a98 3a3a7061 64646564 506f7332 556e7061 ::paddedPos2Unpa\n- 0x003f6aa8 64646564 506f7328 75696e74 33322070 ddedPos(uint32 p\n- 0x003f6ab8 6164706f 73290000 5265646f 20666f72 adpos)..Redo for\n- 0x003f6ac8 20506c61 63656443 6f6e7469 67526561 PlacedContigRea\n- 0x003f6ad8 64730000 7374643a 3a766563 746f723c ds..std::vector<\n- 0x003f6ae8 696e7433 323e2026 20436f6e 7469673a int32> & Contig:\n- 0x003f6af8 3a676574 4352496e 64696365 73417443 :getCRIndicesAtC\n- 0x003f6b08 6f6e7469 67506f73 6974696f 6e287374 ontigPosition(st\n- 0x003f6b18 643a3a76 6563746f 723c696e 7433323e d::vector\n- 0x003f6b28 20262076 65632c20 696e7433 3220706f & vec, int32 po\n- 0x003f6b38 73312c20 696e7433 3220706f 73322920 s1, int32 pos2) \n- 0x003f6b48 636f6e73 74000000 766f6964 20436f6e const...void Con\n- 0x003f6b58 7469673a 3a64656c 65746542 61736549 tig::deleteBaseI\n- 0x003f6b68 6e526561 6428696e 74333220 636f6e74 nRead(int32 cont\n- 0x003f6b78 6967706f 73697469 6f6e2c20 696e7433 igposition, int3\n- 0x003f6b88 32207265 6164696e 64657829 00000000 2 readindex)....\n- 0x003f6b98 766f6964 20436f6e 7469673a 3a696e73 void Contig::ins\n- 0x003f6ba8 65727442 61736549 6e526561 64286368 ertBaseInRead(ch\n- 0x003f6bb8 61722062 6173652c 20626173 655f7175 ar base, base_qu\n- 0x003f6bc8 616c6974 795f7420 7175616c 6974792c ality_t quality,\n- 0x003f6bd8 20696e74 33322063 6f6e7469 67706f73 int32 contigpos\n- 0x003f6be8 6974696f 6e2c2069 6e743332 20726561 ition, int32 rea\n- 0x003f6bf8 64696e64 65782900 52656164 20646f65 dindex).Read doe\n- 0x003f6c08 73206e6f 7420636f 76657220 67697665 s not cover give\n- 0x003f6c18 6e20636f 6e746967 706f7369 74696f6e n contigposition\n- 0x003f6c28 00000000 63686172 20436f6e 7469673a ....char Contig:\n- 0x003f6c38 3a676574 42617365 496e5265 61642863 :getBaseInRead(c\n- 0x003f6c48 6f6e7374 20696e74 33322063 6f6e7469 onst int32 conti\n- 0x003f6c58 67706f73 6974696f 6e2c2063 6f6e7374 gposition, const\n- 0x003f6c68 20506c61 63656443 6f6e7469 67526561 PlacedContigRea\n- 0x003f6c78 64733a3a 636f6e73 745f6974 65726174 ds::const_iterat\n- 0x003f6c88 6f722026 20706372 49292063 6f6e7374 or & pcrI) const\n- 0x003f6c98 00000000 63686172 20436f6e 7469673a ....char Contig:\n- 0x003f6ca8 3a676574 5175616c 69747949 6e526561 :getQualityInRea\n- 0x003f6cb8 6428696e 74333220 636f6e74 6967706f d(int32 contigpo\n- 0x003f6cc8 73697469 6f6e2c20 696e7433 32207265 sition, int32 re\n- 0x003f6cd8 6164696e 64657829 00000000 766f6964 adindex)....void\n- 0x003f6ce8 20436f6e 7469673a 3a636861 6e676542 Contig::changeB\n- 0x003f6cf8 61736549 6e526561 64286368 61722062 aseInRead(char b\n- 0x003f6d08 6173652c 20626173 655f7175 616c6974 ase, base_qualit\n- 0x003f6d18 795f7420 7175616c 6974792c 20696e74 y_t quality, int\n- 0x003f6d28 33322063 6f6e7469 67706f73 6974696f 32 contigpositio\n- 0x003f6d38 6e2c2069 6e743332 20726561 64696e64 n, int32 readind\n- 0x003f6d48 65782900 766f6964 20436f6e 7469673a ex).void Contig:\n- 0x003f6d58 3a616464 54616754 6f526561 6428696e :addTagToRead(in\n- 0x003f6d68 74333220 636f6e74 6967706f 73697469 t32 contigpositi\n- 0x003f6d78 6f6e6672 6f6d2c20 696e7433 3220636f onfrom, int32 co\n- 0x003f6d88 6e746967 706f7369 74696f6e 746f2c20 ntigpositionto, \n- 0x003f6d98 696e7433 32207265 6164696e 6465782c int32 readindex,\n- 0x003f6da8 20636f6e 7374206d 756c7469 74616720 const multitag \n- 0x003f6db8 26206d74 29000000 636f6e74 6967706f & mt)...contigpo\n- 0x003f6dc8 73203e20 73697a65 206f6620 636f6e74 s > size of cont\n- 0x003f6dd8 69670000 766f6964 20436f6e 7469673a ig..void Contig:\n- 0x003f6de8 3a757064 61746554 6167496e 73657274 :updateTagInsert\n- 0x003f6df8 2875696e 74333220 636f6e74 6967706f (uint32 contigpo\n- 0x003f6e08 73290000 766f6964 20436f6e 7469673a s)..void Contig:\n- 0x003f6e18 3a747261 6e73706f 73655265 61645352 :transposeReadSR\n- 0x003f6e28 4d546167 73546f43 6f6e7469 67282900 MTagsToContig().\n- 0x003f6e38 092b0a00 092d096e 6f742063 616c6c65 .+...-.not calle\n- 0x003f6e48 640a0000 092d096e 6f20616c 69676e20 d....-.no align \n- 0x003f6e58 666f756e 640a0000 092d0964 726f7020 found....-.drop \n- 0x003f6e68 696e2072 656c7363 6f726520 746f6f20 in relscore too \n- 0x003f6e78 68696768 0a000000 092d0961 6c69676e high.....-.align\n- 0x003f6e88 2072656a 65637465 64206279 206d7273 rejected by mrs\n- 0x003f6e98 0a000000 092d0974 656d706c 61746520 .....-.template \n- 0x003f6ea8 696e2077 726f6e67 20646972 65637469 in wrong directi\n- 0x003f6eb8 6f6e0a00 092d0970 6c616365 6d656e74 on...-.placement\n- 0x003f6ec8 206f6620 7365676d 656e7420 77726f6e of segment wron\n- 0x003f6ed8 670a0000 092d096d 69736d61 74636820 g....-.mismatch \n- 0x003f6ee8 696e2074 656d706c 61746520 73697a65 in template size\n- 0x003f6ef8 20283c29 0a000000 092d096d 69736d61 (<).....-.misma\n- 0x003f6f08 74636820 696e2074 656d706c 61746520 tch in template \n- 0x003f6f18 73697a65 20283e29 0a000000 092d096d size (>).....-.m\n- 0x003f6f28 69736d61 74636820 696e2053 524d4220 ismatch in SRMB \n- 0x003f6f38 7a6f6e65 0a000000 092d0966 61696c65 zone.....-.faile\n- 0x003f6f48 64207370 65636961 6c205352 20616464 d special SR add\n- 0x003f6f58 2072756c 65730a00 092d0972 65666964 rules...-.refid\n- 0x003f6f68 206e6f74 20616c6c 6f776564 0a000000 not allowed....\n- 0x003f6f78 092d096d 6178636f 76657261 67652072 .-.maxcoverage r\n- 0x003f6f88 65616368 65640a00 092d0974 6f6f206d eached...-.too m\n- 0x003f6f98 616e7920 6d69736d 61746368 65732069 any mismatches i\n- 0x003f6fa8 6e206461 6e676572 207a6f6e 65287329 n danger zone(s)\n- 0x003f6fb8 0a000000 092d0966 6f726365 64206772 .....-.forced gr\n- 0x003f6fc8 6f777468 206e6f74 20726561 63686564 owth not reached\n- 0x003f6fd8 0a000000 092d0967 726f7774 68206e6f .....-.growth no\n- 0x003f6fe8 7420616c 6c6f7765 640a0000 092d0972 t allowed....-.r\n- 0x003f6ff8 656c6567 61746564 0a000000 092d0975 elegated.....-.u\n- 0x003f7008 6e737065 63696669 65642072 656a6563 nspecified rejec\n- 0x003f7018 740a0000 556e6b6e 6f776e20 6572726f t...Unknown erro\n- 0x003f7028 72636f64 65206672 6f6d2074 68652063 rcode from the c\n- 0x003f7038 6f6e7469 67206f62 6a656374 2e000000 ontig object....\n- 0x003f7048 766f6964 20436f6e 7469673a 3a657272 void Contig::err\n- 0x003f7058 6f727374 61747573 5f743a3a 64756d70 orstatus_t::dump\n- 0x003f7068 53746174 75732863 6f6e7374 20636861 Status(const cha\n- 0x003f7078 72202a20 61646469 74696f6e 616c6d73 r * additionalms\n- 0x003f7088 67290000 54727969 6e672074 6f206375 g)..Trying to cu\n- 0x003f7098 74206261 636b206f 74686572 20746861 t back other tha\n- 0x003f70a8 6e20536f 6c657861 202f2053 4f4c6944 n Solexa / SOLiD\n- 0x003f70b8 203f0000 766f6964 20436f6e 7469673a ?..void Contig:\n- 0x003f70c8 3a616e61 6c797365 41445346 6f724375 :analyseADSForCu\n- 0x003f70d8 7474696e 67426163 6b434552 4d617028 ttingBackCERMap(\n- 0x003f70e8 636f6e73 7420416c 69676e65 64447561 const AlignedDua\n- 0x003f70f8 6c536571 20262061 64732c20 696e7433 lSeq & ads, int3\n- 0x003f7108 32206469 72656374 696f6e5f 66726e69 2 direction_frni\n- 0x003f7118 64290000 7175616c 69747920 6f757420 d)..quality out \n- 0x003f7128 6f662062 6f756e64 733f2032 00000000 of bounds? 2....\n- 0x003f7138 766f6964 20436f6e 7469673a 3a757064 void Contig::upd\n- 0x003f7148 61746554 61674261 73654465 6c657465 ateTagBaseDelete\n- 0x003f7158 64287569 6e743332 20636f6e 74696770 d(uint32 contigp\n- 0x003f7168 6f732900 5f646e00 5f726570 5f630000 os)._dn._rep_c..\n- 0x003f7178 5f730000 434f4e5f 636f756e 74732e73 _s..CON_counts.s\n- 0x003f7188 697a6528 293d3d30 203f3f3f 00000000 ize()==0 ???....\n- 0x003f7198 766f6964 20436f6e 7469673a 3a627569 void Contig::bui\n- 0x003f71a8 6c644d61 736b5368 61646f77 28737464 ldMaskShadow(std\n- 0x003f71b8 3a3a7665 63746f72 3c696e74 383e2026 ::vector &\n- 0x003f71c8 206d6173 6b736861 646f772c 20737464 maskshadow, std\n- 0x003f71d8 3a3a7665 63746f72 3c737472 696e673e ::vector\n- 0x003f71e8 2026206d 61736b74 61677374 72696e67 & masktagstring\n- 0x003f71f8 73290000 7374646e 616d6500 6e657769 s)..stdname.newi\n- 0x003f7208 64735b6e 695d3e3d 20726576 65727365 ds[ni]>= reverse\n- 0x003f7218 6d61702e 73697a65 2829203f 3f3f0000 map.size() ???..\n- 0x003f7228 766f6964 20436f6e 7469673a 3a657863 void Contig::exc\n- 0x003f7238 68616e67 65526561 64494473 28737464 hangeReadIDs(std\n- 0x003f7248 3a3a7665 63746f72 3c75696e 7433323e ::vector\n- 0x003f7258 2026206e 65776964 73290000 6372492d & newids)..crI-\n- 0x003f7268 3e6f7270 6964203e 3d206e65 77696473 >orpid >= newids\n- 0x003f7278 2e73697a 65282920 3f3f3f00 766f6964 .size() ???.void\n- 0x003f7288 20436f6e 7469673a 3a726563 616c6354 Contig::recalcT\n- 0x003f7298 656d706c 61746549 4473416e 64537472 emplateIDsAndStr\n- 0x003f72a8 61696e50 72657365 6e742829 00000000 ainPresent()....\n- 0x003f72b8 706f7331 203c2030 3f000000 766f6964 pos1 < 0?...void\n- 0x003f72c8 20436f6e 7469673a 3a676574 50435249 Contig::getPCRI\n- 0x003f72d8 74657261 746f7273 4174436f 6e746967 teratorsAtContig\n- 0x003f72e8 506f7369 74696f6e 28737464 3a3a7665 Position(std::ve\n- 0x003f72f8 63746f72 3c506c61 63656443 6f6e7469 ctor & vec, i\n- 0x003f7328 6e743332 20706f73 312c2069 6e743332 nt32 pos1, int32\n- 0x003f7338 20706f73 32292063 6f6e7374 00000000 pos2) const....\n- 0x003f7348 706f7331 203e2073 697a6520 6f662063 pos1 > size of c\n- 0x003f7358 6f6e7469 673f0000 706f7332 203c2070 ontig?..pos2 < p\n- 0x003f7368 6f733100 203e3d45 52434349 5f706372 os1. >=ERCCI_pcr\n- 0x003f7378 495f7374 5f73742e 73697a65 28292000 I_st_st.size() .\n- 0x003f7388 766f6964 20436f6e 7469673a 3a657263 void Contig::erc\n- 0x003f7398 63695f74 3a3a7570 64617465 28290000 ci_t::update()..\n- 0x003f73a8 73747261 696e6964 20000000 203e3d45 strainid ... >=E\n- 0x003f73b8 52434349 5f706372 495f7374 5f73745b RCCI_pcrI_st_st[\n- 0x003f73c8 73657174 7970655d 2e73697a 65282920 seqtype].size() \n- 0x003f73d8 00000000 6e756d73 74726169 6e733d3d ....numstrains==\n- 0x003f73e8 303f3f3f 00000000 766f6964 20436f6e 0???....void Con\n- 0x003f73f8 7469673a 3a657263 63695f74 3a3a696e tig::ercci_t::in\n- 0x003f7408 69742862 6f6f6c20 74616b65 7261696c it(bool takerail\n- 0x003f7418 732c2062 6f6f6c20 74616b65 6261636b s, bool takeback\n- 0x003f7428 626f6e65 732c2075 696e7433 32206e75 bones, uint32 nu\n- 0x003f7438 6d737472 61696e73 29000000 636f7674 mstrains)...covt\n- 0x003f7448 61726765 742e7369 7a652829 213d5265 arget.size()!=Re\n- 0x003f7458 61644772 6f75704c 69623a3a 53455154 adGroupLib::SEQT\n- 0x003f7468 5950455f 454e4420 3f3f0000 766f6964 YPE_END ??..void\n- 0x003f7478 20436f6e 7469673a 3a736574 436f6e74 Contig::setCont\n- 0x003f7488 6967436f 76657261 67655461 72676574 igCoverageTarget\n- 0x003f7498 28737464 3a3a7665 63746f72 3c75696e (std::vector & \n- 0x003f74f8 7665632c 20696e74 33322070 6f73312c vec, int32 pos1,\n- 0x003f7508 20696e74 33322070 6f733229 20636f6e int32 pos2) con\n- 0x003f7518 73740000 29203e20 73697a65 206f6620 st..) > size of \n- 0x003f7528 636f6e74 69672028 00000000 706f7332 contig (....pos2\n- 0x003f7538 20280000 29203c20 706f7331 20280000 (..) < pos1 (..\n- 0x003f7548 21434f4e 5f726561 64706f6f 6c2d3e67 !CON_readpool->g\n- 0x003f7558 65745265 61642872 65666964 292e6973 etRead(refid).is\n- 0x003f7568 5261696c 2829203f 3f3f0000 766f6964 Rail() ???..void\n- 0x003f7578 20436f6e 7469673a 3a676574 5261696c Contig::getRail\n- 0x003f7588 73417352 65616473 41666665 63746564 sAsReadsAffected\n- 0x003f7598 28636f6e 73742069 6e743332 20726566 (const int32 ref\n- 0x003f75a8 69642c20 7374643a 3a766563 746f723c id, std::vector<\n- 0x003f75b8 696e7433 323e2026 20726561 64735f61 int32> & reads_a\n- 0x003f75c8 66666563 74656429 00000000 434f4e5f ffected)....CON_\n- 0x003f75d8 6c6f6e67 65737472 61696c73 65656e3d longestrailseen=\n- 0x003f75e8 3d303f3f 3f000000 42554720 42554720 =0???...BUG BUG \n- 0x003f75f8 42554720 42554720 4255470a 00000000 BUG BUG BUG.....\n- 0x003f7608 53656172 63686564 20666f72 2072616e Searched for ran\n- 0x003f7618 67652000 434f4e5f 6c6f6e67 65737472 ge .CON_longestr\n- 0x003f7628 61696c73 65656e3a 20000000 46697273 ailseen: ...Firs\n- 0x003f7638 74205043 52493a20 00000000 49276d20 t PCRI: ....I'm \n- 0x003f7648 6f6e2061 20627261 6e636820 49207368 on a branch I sh\n- 0x003f7658 6f756c64 6e277420 62652e20 5265616c ouldn't be. Real\n- 0x003f7668 6c792100 766f6964 20436f6e 7469673a ly!.void Contig:\n- 0x003f7678 3a696e74 6572706f 6c617465 53524d56 :interpolateSRMV\n- 0x003f7688 616c7565 73496e43 4f4e636f 756e7473 aluesInCONcounts\n- 0x003f7698 28636363 6f6e7461 696e6572 5f743a3a (cccontainer_t::\n- 0x003f76a8 69746572 61746f72 20636349 29000000 iterator ccI)...\n- 0x003f76b8 6164732e 6765744f 66667365 74496e41 ads.getOffsetInA\n- 0x003f76c8 6c69676e 6d656e74 282d3129 203e2030 lignment(-1) > 0\n- 0x003f76d8 203f0000 626f6f6c 20436f6e 7469673a ?..bool Contig:\n- 0x003f76e8 3a696e73 6572744d 61707065 64526561 :insertMappedRea\n- 0x003f76f8 64496e43 6f6e7469 6728636f 6e737420 dInContig(const \n- 0x003f7708 416c6967 6e656444 75616c53 65712026 AlignedDualSeq &\n- 0x003f7718 20616473 2c20636f 6e737420 75696e74 ads, const uint\n- 0x003f7728 38206e65 77726561 64736571 74797065 8 newreadseqtype\n- 0x003f7738 2c20636f 6e737420 75696e74 33322063 , const uint32 c\n- 0x003f7748 6f666673 65742c20 636f6e73 7420696e offset, const in\n- 0x003f7758 74333220 64697265 6374696f 6e5f6672 t32 direction_fr\n- 0x003f7768 6e69642c 20696e74 33322063 6f766572 nid, int32 cover\n- 0x003f7778 6167656d 756c7469 706c6965 722c2062 agemultiplier, b\n- 0x003f7788 6f6f6c20 666f7263 656d6572 67652900 ool forcemerge).\n- 0x003f7798 6164732e 67657452 69676874 4f666673 ads.getRightOffs\n- 0x003f77a8 6574496e 416c6967 6e6d656e 74282d31 etInAlignment(-1\n- 0x003f77b8 29203e20 30203f00 54727969 6e672074 ) > 0 ?.Trying t\n- 0x003f77c8 6f206d61 70206f74 68657220 7468616e o map other than\n- 0x003f77d8 20536f6c 65786120 2f20534f 4c694420 Solexa / SOLiD \n- 0x003f77e8 3f000000 4d617070 696e6720 3e3d3820 ?...Mapping >=8 \n- 0x003f77f8 536f6c65 78612073 74726169 6e733f20 Solexa strains? \n- 0x003f7808 536f7272 792c206e 6f742070 6f737369 Sorry, not possi\n- 0x003f7818 626c6520 7965742e 00000000 75696e74 ble yet.....uint\n- 0x003f7828 3820436f 6e746967 3a3a6765 74424253 8 Contig::getBBS\n- 0x003f7838 74726169 6e4d6173 6b28696e 74333220 trainMask(int32 \n- 0x003f7848 73747261 696e6964 29000000 696e6465 strainid)...inde\n- 0x003f7858 78696e63 6f6e7469 673a2000 0a434f4e xincontig: ..CON\n- 0x003f7868 5f636f75 6e74732e 73697a65 28292b31 _counts.size()+1\n- 0x003f7878 3a200000 424f554e 44434845 434b2065 : ..BOUNDCHECK e\n- 0x003f7888 72726f72 00000000 21666f72 63656d65 rror....!forceme\n- 0x003f7898 72676520 2626202a 636f6e74 69677074 rge && *contigpt\n- 0x003f78a8 723d3d27 2a27203f 00000000 63686b20 r=='*' ?....chk \n- 0x003f78b8 31207176 49200000 206f7574 206f6620 1 qvI .. out of \n- 0x003f78c8 626f756e 64732077 72742000 63686b20 bounds wrt .chk \n- 0x003f78d8 32207176 49200000 7175616c 63686b20 2 qvI ..qualchk \n- 0x003f78e8 31203e31 30300000 63686b20 33207176 1 >100..chk 3 qv\n- 0x003f78f8 49200000 7175616c 63686b20 32203e31 I ..qualchk 2 >1\n- 0x003f7908 30300000 766f6964 20436f6e 7469673a 00..void Contig:\n- 0x003f7918 3a757064 61746543 6f756e74 56656374 :updateCountVect\n- 0x003f7928 6f727328 636f6e73 7420696e 74333220 ors(const int32 \n- 0x003f7938 66726f6d 2c20636f 6e737420 696e7433 from, const int3\n- 0x003f7948 32206c65 6e2c2073 74643a3a 76656374 2 len, std::vect\n- 0x003f7958 6f723c63 6861723e 3a3a636f 6e73745f or::const_\n- 0x003f7968 69746572 61746f72 20757064 61746549 iterator updateI\n- 0x003f7978 2c20636f 6e737420 75696e74 33322073 , const uint32 s\n- 0x003f7988 65717479 70652c20 636f6e73 7420626f eqtype, const bo\n- 0x003f7998 6f6c2061 64646966 74727565 2c20696e ol addiftrue, in\n- 0x003f79a8 74333220 636f7665 72616765 6d756c74 t32 coveragemult\n- 0x003f79b8 69706c69 65722900 4572726f 723a0a00 iplier).Error:..\n- 0x003f79c8 66726f6d 3a200000 6c656e3a 20000000 from: ..len: ...\n- 0x003f79d8 73697a65 206f6620 636f6e74 69673a20 size of contig: \n- 0x003f79e8 00000000 66726f6d 202b206c 656e203e ....from + len >\n- 0x003f79f8 2073697a 65206f66 20636f6e 7469673f size of contig?\n- 0x003f7a08 00000000 4f6f6f6f 70732c20 626f756e ....Oooops, boun\n- 0x003f7a18 64636865 636b2066 61696c65 643a2000 dcheck failed: .\n- 0x003f7a28 5748593f 20496c6c 6567616c 20636861 WHY? Illegal cha\n- 0x003f7a38 723a2000 203e3e00 3c3c0a00 556e6578 r: . >>.<<..Unex\n- 0x003f7a48 70656374 65642062 6173652e 00000000 pected base.....\n- 0x003f7a58 636f6e74 6967706f 73697469 6f6e3c30 contigposition<0\n- 0x003f7a68 203f0000 766f6964 20436f6e 7469673a ?..void Contig:\n- 0x003f7a78 3a61646a 75737452 6561644f 66667365 :adjustReadOffse\n- 0x003f7a88 74732869 6e743332 20636f6e 74696770 ts(int32 contigp\n- 0x003f7a98 6f736974 696f6e2c 20696e74 3332206f osition, int32 o\n- 0x003f7aa8 66667365 74290000 52656164 706f6f6c ffset)..Readpool\n- 0x003f7ab8 2069643a 20000000 4572726f 72207768 id: ...Error wh\n- 0x003f7ac8 696c6520 75706461 74696e67 20746869 ile updating thi\n- 0x003f7ad8 73207265 61642028 33293a0a 00000000 s read (3):.....\n- 0x003f7ae8 496e2074 68697320 636f6e74 69672028 In this contig (\n- 0x003f7af8 6f757470 7574206d 69676874 20637261 output might cra\n- 0x003f7b08 7368293a 00000000 766f6964 20436f6e sh):....void Con\n- 0x003f7b18 7469673a 3a737472 6970546f 4261636b tig::stripToBack\n- 0x003f7b28 626f6e65 28290000 5f636572 5f737861 bone().._cer_sxa\n- 0x003f7b38 5f000000 57686f6f 6f707320 312c2071 _...Whooops 1, q\n- 0x003f7b48 75616c20 00000000 20697320 3e3d2031 ual .... is >= 1\n- 0x003f7b58 30302e20 506f7369 74696f6e 20000000 00. Position ...\n- 0x003f7b68 766f6964 20436f6e 7469673a 3a747261 void Contig::tra\n- 0x003f7b78 6e73666f 726d4345 524d6170 70696e67 nsformCERMapping\n- 0x003f7b88 73546f43 6f766572 61676552 65616473 sToCoverageReads\n- 0x003f7b98 28290000 57686f6f 6f707320 322c2071 ()..Whooops 2, q\n- 0x003f7ba8 75616c20 00000000 4572726f 723a2064 ual ....Error: d\n- 0x003f7bb8 6964206e 6f742066 696e6420 73747261 id not find stra\n- 0x003f7bc8 696e2022 00000000 2220696e 20726561 in \"....\" in rea\n- 0x003f7bd8 64706f6f 6c2e0000 48617665 20626565 dpool...Have bee\n- 0x003f7be8 6e206173 6b656420 746f2075 7365206e n asked to use n\n- 0x003f7bf8 6f6e2d65 78697374 696e6720 73747261 on-existing stra\n- 0x003f7c08 696e2066 6f722062 75696c64 696e6720 in for building \n- 0x003f7c18 7261696c 732e0000 766f6964 20436f6e rails...void Con\n- 0x003f7c28 7469673a 3a616464 5261696c 73282900 tig::addRails().\n- 0x003f7c38 62625f00 72725f23 23232300 23232323 bb_.rr_####.####\n- 0x003f7c48 00000000 20666972 73742072 61696c3a .... first rail:\n- 0x003f7c58 20000000 206c6173 74207261 696c3a20 ... last rail: \n- 0x003f7c68 00000000 0a4f7563 68202e2e 2e206572 .....Ouch ... er\n- 0x003f7c78 726f7220 7768696c 65206164 64696e67 ror while adding\n- 0x003f7c88 20737562 73657175 656e6365 2e0a0000 subsequence....\n- 0x003f7c98 63732e73 697a653a 20000000 7472616e cs.size: ...tran\n- 0x003f7ca8 73693a20 00000000 6163746f 66667365 si: ....actoffse\n- 0x003f7cb8 743a2000 72656164 6e616d65 3a200000 t: .readname: ..\n- 0x003f7cc8 7365713a 20000000 41646469 6e672072 seq: ...Adding r\n- 0x003f7cd8 61696c73 3a206c65 6e677468 20000000 ails: length ...\n- 0x003f7ce8 20616e64 206f7665 726c6170 20000000 and overlap ...\n- 0x003f7cf8 436f6e74 69672000 20686173 206e6f20 Contig . has no \n- 0x003f7d08 73747261 696e6e61 6d657320 67697665 strainnames give\n- 0x003f7d18 6e206974 20697473 20646174 612e204e n it its data. N\n- 0x003f7d28 6f742067 6f6f642c 206d616b 65207375 ot good, make su\n- 0x003f7d38 7265206f 6e652069 73207072 6573656e re one is presen\n- 0x003f7d48 74202874 72792070 75747469 6e672027 t (try putting '\n- 0x003f7d58 73747261 696e6e61 6d653d27 20696e20 strainname=' in \n- 0x003f7d68 6d616e69 66657374 2066696c 65292e00 manifest file)..\n- 0x003f7d78 766f6964 20436f6e 7469673a 3a736574 void Contig::set\n- 0x003f7d88 75704173 4261636b 426f6e65 436f6e74 upAsBackBoneCont\n- 0x003f7d98 69672829 00000000 20686173 20737472 ig().... has str\n- 0x003f7da8 61696e20 00000000 536f6d65 7468696e ain ....Somethin\n- 0x003f7db8 67206973 2077726f 6e672077 69746820 g is wrong with \n- 0x003f7dc8 636f6666 7365743a 20000000 766f6964 coffset: ...void\n- 0x003f7dd8 20436f6e 7469673a 3a696e73 65727452 Contig::insertR\n- 0x003f7de8 65616449 6e436f6e 74696728 416c6967 eadInContig(Alig\n- 0x003f7df8 6e656444 75616c53 65712026 20616473 nedDualSeq & ads\n- 0x003f7e08 2c207569 6e743332 20636f66 66736574 , uint32 coffset\n- 0x003f7e18 2c20696e 74333220 64697265 6374696f , int32 directio\n- 0x003f7e28 6e5f6672 6e69642c 20696e74 33322064 n_frnid, int32 d\n- 0x003f7e38 69726563 74696f6e 5f726566 69642c20 irection_refid, \n- 0x003f7e48 696e7433 3220636f 76657261 67656d75 int32 coveragemu\n- 0x003f7e58 6c746970 6c696572 29000000 536f6d65 ltiplier)...Some\n- 0x003f7e68 7468696e 67206973 2077726f 6e672077 thing is wrong w\n- 0x003f7e78 69746820 74686174 20414453 210a0000 ith that ADS!...\n- 0x003f7e88 6f666673 65746e65 77726561 643e434f offsetnewread>CO\n- 0x003f7e98 4e5f636f 756e7473 2e73697a 65282920 N_counts.size() \n- 0x003f7ea8 3f3f3f00 696e6465 78696e72 65616420 ???.indexinread \n- 0x003f7eb8 3c203020 3f000000 696e6465 78696e63 < 0 ?...indexinc\n- 0x003f7ec8 6f6e7469 67203c20 30203f00 426f7468 ontig < 0 ?.Both\n- 0x003f7ed8 20737472 616e6473 20696e20 61647320 strands in ads \n- 0x003f7ee8 68617665 20612027 2a27203f 00000000 have a '*' ?....\n- 0x003f7ef8 696e6465 78696e63 6f6e7469 67202800 indexincontig (.\n- 0x003f7f08 29203e20 434f4e5f 636f756e 74732e73 ) > CON_counts.s\n- 0x003f7f18 697a6528 29202800 75736564 20616464 ize() (.used add\n- 0x003f7f28 46697273 74526561 64207768 696c6520 FirstRead while \n- 0x003f7f38 74686572 65206172 6520616c 72656164 there are alread\n- 0x003f7f48 79207265 61647320 696e2063 6f6e7469 y reads in conti\n- 0x003f7f58 672e0000 766f6964 20436f6e 7469673a g...void Contig:\n- 0x003f7f68 3a616464 46697273 74526561 64287569 :addFirstRead(ui\n- 0x003f7f78 6e743332 2069642c 20696e74 38206469 nt32 id, int8 di\n- 0x003f7f88 72656374 696f6e29 00000000 756e7465 rection)....unte\n- 0x003f7f98 73746564 20646972 65637469 6f6e203c sted direction <\n- 0x003f7fa8 20300000 66726f6e 7464656c 6574696f 0..frontdeletio\n- 0x003f7fb8 6e73203c 2030203f 00000000 766f6964 ns < 0 ?....void\n- 0x003f7fc8 20436f6e 7469673a 3a64656c 65746552 Contig::deleteR\n- 0x003f7fd8 65616428 75696e74 33322069 64290000 ead(uint32 id)..\n- 0x003f7fe8 656e643a 206d6178 63686563 6b6c656e end: maxchecklen\n- 0x003f7ff8 3c203020 3f000000 656e6464 656c6574 < 0 ?...enddelet\n- 0x003f8008 696f6e73 203c2030 203f0000 54656d70 ions < 0 ?..Temp\n- 0x003f8018 6c617465 206e6f74 20707265 73656e74 late not present\n- 0x003f8028 20696e20 6c697374 2074686f 75676820 in list though \n- 0x003f8038 72656164 20686173 206f6e65 3f000000 read has one?...\n- 0x003f8048 47616161 61616168 21205472 79696e67 Gaaaaaah! Trying\n- 0x003f8058 20746f20 61646420 61207265 6164206f to add a read o\n- 0x003f8068 66206c65 6e677468 20303f3f 3f0a0000 f length 0???...\n- 0x003f8078 47616161 61616168 21205472 79696e67 Gaaaaaah! Trying\n- 0x003f8088 20746f20 61646420 61207265 6164206f to add a read o\n- 0x003f8098 66206c65 6e677468 20303f3f 3f000000 f length 0???...\n- 0x003f80a8 766f6964 20436f6e 7469673a 3a616464 void Contig::add\n- 0x003f80b8 52656164 5f777261 70706564 28737464 Read_wrapped(std\n- 0x003f80c8 3a3a7665 63746f72 3c416c69 676e3e20 ::vector \n- 0x003f80d8 2620616c 69676e63 61636865 2c20636f & aligncache, co\n- 0x003f80e8 6e737420 416c6967 6e656444 75616c53 nst AlignedDualS\n- 0x003f80f8 65714661 63747320 2a20696e 69746961 eqFacts * initia\n- 0x003f8108 6c616473 662c2069 6e743332 20726566 ladsf, int32 ref\n- 0x003f8118 69642c20 696e7433 32206e65 7769642c id, int32 newid,\n- 0x003f8128 20696e74 33322064 69726563 74696f6e int32 direction\n- 0x003f8138 5f66726e 69642c20 626f6f6c 206e6577 _frnid, bool new\n- 0x003f8148 69645f69 736d756c 7469636f 70792c20 id_ismulticopy, \n- 0x003f8158 696e7433 3220666f 72636567 726f772c int32 forcegrow,\n- 0x003f8168 20657272 6f727374 61747573 5f742026 errorstatus_t &\n- 0x003f8178 20657272 73746174 29000000 54797065 errstat)...Type\n- 0x003f8188 20414249 20534f4c 6944206e 65656473 ABI SOLiD needs\n- 0x003f8198 206d6f72 65207375 70706f72 7420342e more support 4.\n- 0x003f81a8 00000000 0a536571 74797065 3a200000 .....Seqtype: ..\n- 0x003f81b8 54727969 6e672074 6f206164 6420756e Trying to add un\n- 0x003f81c8 6b6e6f77 6e207365 71747970 653f204e known seqtype? N\n- 0x003f81d8 65656473 206d6f72 6520636f 64652034 eeds more code 4\n- 0x003f81e8 2e000000 61667465 72206164 64466972 ....after addFir\n- 0x003f81f8 73745265 61643a20 434f4e5f 72656164 stRead: CON_read\n- 0x003f8208 73706572 73747261 696e2e73 697a6528 sperstrain.size(\n- 0x003f8218 29200000 203c2052 65616447 726f7570 ) .. < ReadGroup\n- 0x003f8228 4c69623a 3a676574 4e756d4f 66537472 Lib::getNumOfStr\n- 0x003f8238 61696e73 28282920 00000000 54726965 ains(() ....Trie\n- 0x003f8248 6420746f 20616464 20612072 61696c3f d to add a rail?\n- 0x003f8258 3f3f0000 72656669 64206e6f 7420696e ??..refid not in\n- 0x003f8268 20696e69 7469616c 61647366 3f3f3f0a initialadsf???.\n- 0x003f8278 00000000 6e657769 64206e6f 7420696e ....newid not in\n- 0x003f8288 20696e69 7469616c 61647366 3f3f3f0a initialadsf???.\n- 0x003f8298 00000000 496d706f 73736962 6c652065 ....Impossible e\n- 0x003f82a8 72726f72 20776869 6c652061 6464696e rror while addin\n- 0x003f82b8 67207265 61642c20 696e7665 73746967 g read, investig\n- 0x003f82c8 61746521 20546869 73206d61 79206265 ate! This may be\n- 0x003f82d8 20647565 20666175 6c747920 52414d2e due faulty RAM.\n- 0x003f82e8 00000000 54797065 20414249 20534f4c ....Type ABI SOL\n- 0x003f82f8 6944206e 65656473 206d6f72 65207375 iD needs more su\n- 0x003f8308 70706f72 74203461 2e000000 48617669 pport 4a....Havi\n- 0x003f8318 6e672075 6e6b6e6f 776e2073 65717479 ng unknown seqty\n- 0x003f8328 70652061 73207265 66657265 6e63653f pe as reference?\n- 0x003f8338 204e6565 6473206d 6f726520 636f6465 Needs more code\n- 0x003f8348 2034612e 00000000 52656649 44200000 4a.....RefID ..\n- 0x003f8358 29206e6f 7420666f 756e6420 6f6e2063 ) not found on c\n- 0x003f8368 6f6e7469 673f0000 66696e61 6c3a2078 ontig?..final: x\n- 0x003f8378 63757420 00000000 203e2079 63757420 cut .... > ycut \n- 0x003f8388 00000000 53686565 6573682c 206c656e ....Sheeesh, len\n- 0x003f8398 67746820 6f662074 656d706f 72617279 gth of temporary\n- 0x003f83a8 20636f6e 73656e73 75732069 7320303f consensus is 0?\n- 0x003f83b8 20457272 6f722c20 62757420 636f6e74 Error, but cont\n- 0x003f83c8 696e7569 6e672061 73207468 69732070 inuing as this p\n- 0x003f83d8 726f6261 626c7920 77696c6c 206e6f74 robably will not\n- 0x003f83e8 20616666 65637420 636f6e74 69672d62 affect contig-b\n- 0x003f83f8 75696c64 696e6720 616e7977 61792e00 uilding anyway..\n- 0x003f8408 0a786375 743a2000 0a796375 743a2000 .xcut: ..ycut: .\n- 0x003f8418 0a656f66 66736574 3a200000 4f756368 .eoffset: ..Ouch\n- 0x003f8428 202e2e2e 20657272 6f722069 6e20616c ... error in al\n- 0x003f8438 69676e6d 656e7420 64657465 63746564 ignment detected\n- 0x003f8448 2e0a0000 78637574 3a200000 79637574 ....xcut: ..ycut\n- 0x003f8458 3a200000 656f6666 7365743a 20000000 : ..eoffset: ...\n- 0x003f8468 6469725f 66726e69 643a2000 09646972 dir_frnid: ..dir\n- 0x003f8478 5f726566 69643a20 00000000 4f666673 _refid: ....Offs\n- 0x003f8488 65742052 65666964 3a000000 5568206f et Refid:...Uh o\n- 0x003f8498 68202e2e 2e206e6f 7420676f 6f640a00 h ... not good..\n- 0x003f84a8 666f7263 656d6572 67652000 434f4e5f forcemerge .CON_\n- 0x003f84b8 6d657267 656e6577 73727265 61647320 mergenewsrreads \n- 0x003f84c8 00000000 6d61796d 61707468 69737265 ....maymapthisre\n- 0x003f84d8 61642000 6e657772 65616473 65717479 ad .newreadseqty\n- 0x003f84e8 70652000 72745f70 6172616d 732e6765 pe .rt_params.ge\n- 0x003f84f8 74436f6e 74696750 6172616d 7328292e tContigParams().\n- 0x003f8508 636f6e5f 6d657267 6573686f 72747265 con_mergeshortre\n- 0x003f8518 61647320 00000000 61647349 2d3e6765 ads ....adsI->ge\n- 0x003f8528 7453636f 72655261 74696f28 29200000 tScoreRatio() ..\n- 0x003f8538 63616e6d 61702000 61646452 65616465 canmap .addReade\n- 0x003f8548 72726f72 5f524550 4c41595f 646f5f6e rror_REPLAY_do_n\n- 0x003f8558 6f745f64 656c6574 652e6c6f 67000000 ot_delete.log...\n- 0x003f8568 0a0a0a41 2066696c 65206e61 6d656420 ...A file named \n- 0x003f8578 27616464 52656164 6572726f 725f5245 'addReaderror_RE\n- 0x003f8588 504c4159 5f646f5f 6e6f745f 64656c65 PLAY_do_not_dele\n- 0x003f8598 74652e6c 6f672720 68617320 6265656e te.log' has been\n- 0x003f85a8 20777269 7474656e 0a746f20 74686520 written.to the \n- 0x003f85b8 776f726b 696e6720 64697265 63746f72 working director\n- 0x003f85c8 792e2050 6c656173 65207365 6e642069 y. Please send i\n- 0x003f85d8 7420746f 20746865 20617574 686f7220 t to the author \n- 0x003f85e8 746f2067 65742074 68617420 62756720 to get that bug \n- 0x003f85f8 66697865 64210a0a 0a000000 766f6964 fixed!......void\n- 0x003f8608 20436f6e 7469673a 3a616464 52656164 Contig::addRead\n- 0x003f8618 28737464 3a3a7665 63746f72 3c416c69 (std::vector & aligncache\n- 0x003f8638 2c20636f 6e737420 416c6967 6e656444 , const AlignedD\n- 0x003f8648 75616c53 65714661 63747320 2a20696e ualSeqFacts * in\n- 0x003f8658 69746961 6c616473 662c2069 6e743332 itialadsf, int32\n- 0x003f8668 20726566 69642c20 696e7433 32206e65 refid, int32 ne\n- 0x003f8678 7769642c 20696e74 33322064 69726563 wid, int32 direc\n- 0x003f8688 74696f6e 5f66726e 69642c20 626f6f6c tion_frnid, bool\n- 0x003f8698 206e6577 69645f69 736d756c 7469636f newid_ismultico\n- 0x003f86a8 70792c20 696e7433 3220666f 72636567 py, int32 forceg\n- 0x003f86b8 726f772c 2074656d 706c6174 65677565 row, templategue\n- 0x003f86c8 73735f74 20262074 656d706c 61746567 ss_t & templateg\n- 0x003f86d8 75657373 2c206572 726f7273 74617475 uess, errorstatu\n- 0x003f86e8 735f7420 26206572 72737461 74290000 s_t & errstat)..\n- 0x003f86f8 0a574152 4e494e47 2f455252 4f523a20 .WARNING/ERROR: \n- 0x003f8708 69676e6f 72656420 61206d69 7373696e ignored a missin\n- 0x003f8718 67207265 66696400 66697273 746b6e6f g refid.firstkno\n- 0x003f8728 776e6262 706f7320 00000000 203c3020 wnbbpos .... <0 \n- 0x003f8738 3f3f3f00 766f6964 20436f6e 7469673a ???.void Contig:\n- 0x003f8748 3a747269 6d4d6170 4f766572 68616e67 :trimMapOverhang\n- 0x003f8758 28290000 6c617374 6b6e6f77 6e626270 ()..lastknownbbp\n- 0x003f8768 6f732000 414c5553 00000000 52455054 os .ALUS....REPT\n- 0x003f8778 00000000 53524d72 00000000 43524d72 ....SRMr....CRMr\n- 0x003f8788 00000000 57524d72 00000000 53494f72 ....WRMr....SIOr\n- 0x003f8798 00000000 636f6e74 6967706f 73746f20 ....contigposto \n- 0x003f87a8 3c20636f 6e746967 706f7366 726f6d20 < contigposfrom \n- 0x003f87b8 6e6f7420 616c6c6f 77656400 766f6964 not allowed.void\n- 0x003f87c8 20436f6e 7469673a 3a616464 54616754 Contig::addTagT\n- 0x003f87d8 6f436f6e 73656e73 75732869 6e743332 oConsensus(int32\n- 0x003f87e8 20636f6e 74696770 6f736672 6f6d2c20 contigposfrom, \n- 0x003f87f8 696e7433 3220636f 6e746967 706f7374 int32 contigpost\n- 0x003f8808 6f2c2063 6f6e7374 20636861 72202a20 o, const char * \n- 0x003f8818 6964656e 74696669 65722c20 636f6e73 identifier, cons\n- 0x003f8828 74206368 6172202a 20636f6d 6d656e74 t char * comment\n- 0x003f8838 29000000 636f6e74 6967706f 7366726f )...contigposfro\n- 0x003f8848 6d203e20 73697a65 206f6620 636f6e74 m > size of cont\n- 0x003f8858 69670000 636f6e74 6967706f 73746f20 ig..contigposto \n- 0x003f8868 3e207369 7a65206f 6620636f 6e746967 > size of contig\n- 0x003f8878 00000000 73747261 6e642069 73206e6f ....strand is no\n- 0x003f8888 74202b2c 202d206f 72203d00 54727969 t +, - or =.Tryi\n- 0x003f8898 6e672074 6f207365 7420696c 6c656761 ng to set illega\n- 0x003f88a8 6c207374 72616e64 20636861 72616374 l strand charact\n- 0x003f88b8 65722000 434f4e5f 72656164 706f6f6c er .CON_readpool\n- 0x003f88c8 2d3e6765 744e756d 4f665374 7261696e ->getNumOfStrain\n- 0x003f88d8 496e5265 6164706f 6f6c2829 3d3d3020 InReadpool()==0 \n- 0x003f88e8 3f3f3f00 766f6964 20436f6e 7469673a ???.void Contig:\n- 0x003f88f8 3a696e69 7469616c 69736543 6f6e7469 :initialiseConti\n- 0x003f8908 6728636f 6e737420 7374643a 3a6c6973 g(const std::lis\n- 0x003f8918 743c636f 6e746967 5f696e69 745f7265 t & rlist, s\n- 0x003f8938 74643a3a 76656374 6f723c6d 756c7469 td::vector & tags, c\n- 0x003f8958 6f6e7374 20737464 3a3a7374 72696e67 onst std::string\n- 0x003f8968 20262063 6f6e7469 676e616d 652c2073 & contigname, s\n- 0x003f8978 74643a3a 73747269 6e672026 20666978 td::string & fix\n- 0x003f8988 65647365 712c2073 74643a3a 76656374 edseq, std::vect\n- 0x003f8998 6f723c62 6173655f 7175616c 6974795f or & fixedqual).\n- 0x003f89b8 436f6e74 69672068 61732073 697a6520 Contig has size \n- 0x003f89c8 00000000 20776869 63682069 73203c3d .... which is <=\n- 0x003f89d8 2030203f 3f3f0000 63634920 3d3d2043 0 ???..ccI == C\n- 0x003f89e8 4f4e5f63 6f756e74 732e656e 64282920 ON_counts.end() \n- 0x003f89f8 3f3f3f00 2a636f6e 7362203d 3d203020 ???.*consb == 0 \n- 0x003f8a08 3f000000 0a4d696e 6f722070 726f626c ?....Minor probl\n- 0x003f8a18 656d2077 69746820 636f6e74 69672000 em with contig .\n- 0x003f8a28 2c206669 78696e67 2e0a0000 4572726f , fixing....Erro\n- 0x003f8a38 72207768 696c6520 61646469 6e672074 r while adding t\n- 0x003f8a48 68697320 72656164 20283129 3a0a0000 his read (1):...\n- 0x003f8a58 41667465 72207472 696d6d69 6e672c20 After trimming, \n- 0x003f8a68 636f6e74 69672068 6173207a 65726f20 contig has zero \n- 0x003f8a78 6c656e67 74683f00 696e6c69 6e652054 length?.inline T\n- 0x003f8a88 54202620 48446571 75653a3a 68646974 T & HDeque::hdit\n- 0x003f8a98 65723a3a 64657265 66657265 6e636528 er::dereference(\n- 0x003f8aa8 2920636f 6e737400 69746572 61746f72 ) const.iterator\n- 0x003f8ab8 20707269 765f6572 61736528 69746572 priv_erase(iter\n- 0x003f8ac8 61746f72 2066726f 6d2c2069 74657261 ator from, itera\n- 0x003f8ad8 746f7220 746f2900 48446571 75653a3a tor to).HDeque::\n- 0x003f8ae8 696e7365 72742869 74657261 746f7220 insert(iterator \n- 0x003f8af8 77686572 652c2073 697a655f 74206e75 where, size_t nu\n- 0x003f8b08 6d2c2063 6f6e7374 20545420 26207829 m, const TT & x)\n- 0x003f8b18 00000000 766f6964 20736574 53747261 ....void setStra\n- 0x003f8b28 6e642863 68617220 73290000 7063723a nd(char s)..pcr:\n- 0x003f8b38 20000000 09727062 493a2000 0972616f ....rpbI: ..rao\n- 0x003f8b48 69200000 54686973 20697320 656e6428 i ..This is end(\n- 0x003f8b58 29000000 54727969 6e672074 6f206465 )...Trying to de\n- 0x003f8b68 72656665 72656e63 6520616e 20686469 reference an hdi\n- 0x003f8b78 74657220 706f696e 74696e67 20746f20 ter pointing to \n- 0x003f8b88 656e6428 293f3f3f 00000000 64657175 end()???....dequ\n- 0x003f8b98 653a3a5f 4d5f6e65 775f656c 656d656e e::_M_new_elemen\n- 0x003f8ba8 74735f61 745f6672 6f6e7400 6373697a ts_at_front.csiz\n- 0x003f8bb8 65200000 20213d20 48445f73 697a6520 e .. != HD_size \n- 0x003f8bc8 00000000 63616c6c 65642077 69746820 ....called with \n- 0x003f8bd8 616e2069 74657261 746f7220 6e6f7420 an iterator not \n- 0x003f8be8 62656c6f 6e67696e 6720746f 20746869 belonging to thi\n- 0x003f8bf8 7320636f 6e746169 6e65723f 00000000 s container?....\n- 0x003f8c08 77686572 65206361 6c6c6564 20776974 where called wit\n- 0x003f8c18 6820616e 20697465 7261746f 72206e6f h an iterator no\n- 0x003f8c28 74206265 6c6f6e67 696e6720 746f2074 t belonging to t\n- 0x003f8c38 68697320 636f6e74 61696e65 723f0000 his container?..\n- 0x003f8c48 746f2063 616c6c65 64207769 74682061 to called with a\n- 0x003f8c58 6e206974 65726174 6f72206e 6f742062 n iterator not b\n- 0x003f8c68 656c6f6e 67696e67 20746f20 74686973 elonging to this\n- 0x003f8c78 20636f6e 7461696e 65723f00 64696666 container?.diff\n- 0x003f8c88 3e48445f 73697a65 00000000 00000000 >HD_size........\n+ 0x003f3da8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003f3db8 3d3d3d3d 3d3d0a00 546d7020 64697265 ======..Tmp dire\n+ 0x003f3dc8 63746f72 79206973 206e6f74 206f6e20 ctory is not on \n+ 0x003f3dd8 61204e46 53206d6f 756e742c 20676f6f a NFS mount, goo\n+ 0x003f3de8 642e0a0a 00000000 0a4d616b 65207375 d........Make su\n+ 0x003f3df8 72652000 20697320 2a4e4f54 2a206f6e re . is *NOT* on\n+ 0x003f3e08 2061204e 4653206d 6f756e74 206f7220 a NFS mount or \n+ 0x003f3e18 656c7365 204d4952 41207769 6c6c2072 else MIRA will r\n+ 0x003f3e28 756e202a 76657279 2a20736c 6f776c79 un *very* slowly\n+ 0x003f3e38 2e0a0000 0a0a0a0a 0a574152 4e494e47 .........WARNING\n+ 0x003f3e48 20574152 4e494e47 20574152 4e494e47 WARNING WARNING\n+ 0x003f3e58 210a0a49 74206c6f 6f6b7320 6c696b65 !..It looks like\n+ 0x003f3e68 20746865 20646972 6563746f 7279204d the directory M\n+ 0x003f3e78 49524120 75736573 20666f72 2074656d IRA uses for tem\n+ 0x003f3e88 706f7261 72792066 696c6573 0a202020 porary files. \n+ 0x003f3e98 20000000 0a697320 6f6e2061 204e4653 ....is on a NFS\n+ 0x003f3ea8 20284e65 74776f72 6b204669 6c652053 (Network File S\n+ 0x003f3eb8 79737465 6d29206d 6f756e74 2e205468 ystem) mount. Th\n+ 0x003f3ec8 69732077 696c6c20 736c6f77 20646f77 is will slow dow\n+ 0x003f3ed8 6e204d49 5241202a 636f6e73 69646572 n MIRA *consider\n+ 0x003f3ee8 61626c79 2a0a2e2e 2e206279 2061626f ably*.... by abo\n+ 0x003f3ef8 75742061 20666163 746f7220 6f662031 ut a factor of 1\n+ 0x003f3f08 30210a0a 49662079 6f752064 6f6e2774 0!..If you don't\n+ 0x003f3f18 2077616e 74207468 61742c20 796f7520 want that, you \n+ 0x003f3f28 68617665 20746872 65652070 6f737369 have three possi\n+ 0x003f3f38 62696c69 74696573 3a0a0a31 29205245 bilities:..1) RE\n+ 0x003f3f48 434f4d4d 454e4445 44212055 7365202d COMMENDED! Use -\n+ 0x003f3f58 44493a74 72742074 6f207265 64697265 DI:trt to redire\n+ 0x003f3f68 63742074 68652074 6d702064 69726563 ct the tmp direc\n+ 0x003f3f78 746f7279 20736f6d 65776865 72652065 tory somewhere e\n+ 0x003f3f88 6c736520 6f6e2061 0a202020 6c6f6361 lse on a. loca\n+ 0x003f3f98 6c206469 736b206f 72206576 656e2053 l disk or even S\n+ 0x003f3fa8 53442e0a 32292041 4c534f20 504f5353 SD..2) ALSO POSS\n+ 0x003f3fb8 49424c45 3a207075 74207468 65207768 IBLE: put the wh\n+ 0x003f3fc8 6f6c6520 70726f6a 65637420 736f6d65 ole project some\n+ 0x003f3fd8 77686572 6520656c 7365206f 6e20796f where else on yo\n+ 0x003f3fe8 75722066 696c6520 73797374 656d2e0a ur file system..\n+ 0x003f3ff8 33292041 42534f4c 5554454c 59204e4f 3) ABSOLUTELY NO\n+ 0x003f4008 54205245 434f4d4d 454e4445 44204154 T RECOMMENDED AT\n+ 0x003f4018 20414c4c 3a207573 6520222d 4e573a63 ALL: use \"-NW:c\n+ 0x003f4028 6e66733d 7761726e 2220746f 2074656c nfs=warn\" to tel\n+ 0x003f4038 6c204d49 5241206e 6f740a20 2020746f l MIRA not. to\n+ 0x003f4048 2073746f 70207768 656e2069 74206669 stop when it fi\n+ 0x003f4058 6e647320 74686520 746d7020 64697265 nds the tmp dire\n+ 0x003f4068 63746f72 79206f6e 204e4653 2e0a0a49 ctory on NFS...I\n+ 0x003f4078 6620796f 7520646f 206e6f74 206b6e6f f you do not kno\n+ 0x003f4088 77207768 6174204e 46532069 7320616e w what NFS is an\n+ 0x003f4098 64207768 69636820 64697265 63746f72 d which director\n+ 0x003f40a8 7920746f 20757365 20696e20 222d4449 y to use in \"-DI\n+ 0x003f40b8 3a747274 222c2061 736b0a79 6f757220 :trt\", ask.your \n+ 0x003f40c8 6c6f6361 6c207379 7374656d 2061646d local system adm\n+ 0x003f40d8 696e6973 74726174 6f722074 6f206775 inistrator to gu\n+ 0x003f40e8 69646520 796f752e 0a0a0000 546d7020 ide you.....Tmp \n+ 0x003f40f8 64697265 63746f72 79206973 206f6e20 directory is on \n+ 0x003f4108 61204e46 53206d6f 756e7420 2e2e2e20 a NFS mount ... \n+ 0x003f4118 62757420 77652064 6f6e2774 2077616e but we don't wan\n+ 0x003f4128 74207468 61742e00 766f6964 20417373 t that..void Ass\n+ 0x003f4138 656d626c 793a3a63 6865636b 466f724e embly::checkForN\n+ 0x003f4148 46534d6f 756e744f 6e546d70 44697228 FSMountOnTmpDir(\n+ 0x003f4158 29000000 2e62696e 00000000 2e62696e )....bin.....bin\n+ 0x003f4168 2e726564 75636564 00000000 48756e74 .reduced....Hunt\n+ 0x003f4178 696e6720 6a6f696e 2073706f 696c6572 ing join spoiler\n+ 0x003f4188 00000000 48535320 41742065 6e643a20 ....HSS At end: \n+ 0x003f4198 00000000 5472616e 73666572 696e6720 ....Transfering \n+ 0x003f41a8 72656164 7320746f 20726561 64706f6f reads to readpoo\n+ 0x003f41b8 6c2e0000 696e6465 783a2000 20677265 l...index: . gre\n+ 0x003f41c8 61746572 20746861 6e204153 5f726561 ater than AS_rea\n+ 0x003f41d8 64706f6f 6c2e7369 7a652829 3a000000 dpool.size():...\n+ 0x003f41e8 2020286f 7574206f 6620626f 756e6473 (out of bounds\n+ 0x003f41f8 29000000 636f6e73 74205265 61642026 )...const Read &\n+ 0x003f4208 20417373 656d626c 793a3a67 65745265 Assembly::getRe\n+ 0x003f4218 61642875 696e7433 3220696e 64657829 ad(uint32 index)\n+ 0x003f4228 00000000 50726563 6865636b 20666169 ....Precheck fai\n+ 0x003f4238 6c65643a 20000000 766f6964 20417373 led: ...void Ass\n+ 0x003f4248 656d626c 793a3a6d 616b654e 65775265 embly::makeNewRe\n+ 0x003f4258 6164506f 6f6c4672 6f6d436f 6e746967 adPoolFromContig\n+ 0x003f4268 73282900 506f7374 63686563 6b312066 s().Postcheck1 f\n+ 0x003f4278 61696c65 643a2000 506f7374 63686563 ailed: .Postchec\n+ 0x003f4288 6b322066 61696c65 643a2000 436f756c k2 failed: .Coul\n+ 0x003f4298 64206e6f 74206d61 6b652073 75726520 d not make sure \n+ 0x003f42a8 74686174 2061206e 65656465 64206469 that a needed di\n+ 0x003f42b8 72656374 6f727920 65786973 74732028 rectory exists (\n+ 0x003f42c8 73656520 6c6f6720 61626f76 6520666f see log above fo\n+ 0x003f42d8 72206d6f 72652069 6e666f29 2c206162 r more info), ab\n+ 0x003f42e8 6f727469 6e67204d 4952412e 00000000 orting MIRA.....\n+ 0x003f42f8 766f6964 20417373 656d626c 793a3a65 void Assembly::e\n+ 0x003f4308 6e737572 65537461 6e646172 64446972 nsureStandardDir\n+ 0x003f4318 6563746f 72696573 28626f6f 6c207075 ectories(bool pu\n+ 0x003f4328 72676529 00000000 436f756c 64206e6f rge)....Could no\n+ 0x003f4338 74206d61 6b652073 75726520 74686174 t make sure that\n+ 0x003f4348 20746865 204d4952 4120746d 70206469 the MIRA tmp di\n+ 0x003f4358 72656374 6f727920 65786973 74732c20 rectory exists, \n+ 0x003f4368 61626f72 74696e67 2e000000 5f585858 aborting...._XXX\n+ 0x003f4378 58585800 436f756c 64206e6f 74206372 XXX.Could not cr\n+ 0x003f4388 65617465 20646972 6563746f 72792066 eate directory f\n+ 0x003f4398 6f722074 656d706f 72617279 204d4952 or temporary MIR\n+ 0x003f43a8 41206461 74612000 436f756c 64206e6f A data .Could no\n+ 0x003f43b8 74206372 65617465 204d4952 4120746d t create MIRA tm\n+ 0x003f43c8 70206469 72656374 6f727920 22000000 p directory \"...\n+ 0x003f43d8 223a2069 7320736f 6d652070 61727420 \": is some part \n+ 0x003f43e8 6f662074 68652070 61746820 6e6f7420 of the path not \n+ 0x003f43f8 65786973 74696e67 206f7220 61636365 existing or acce\n+ 0x003f4408 73732070 726f7465 63746564 3f000000 ss protected?...\n+ 0x003f4418 53796d6c 696e6b20 00000000 206e6f77 Symlink .... now\n+ 0x003f4428 20706f69 6e74696e 6720746f 20000000 pointing to ...\n+ 0x003f4438 746d7000 4d41466d 65726765 3a20436f tmp.MAFmerge: Co\n+ 0x003f4448 756c6420 6e6f7420 6f70656e 20686561 uld not open hea\n+ 0x003f4458 6465726d 61662000 4d41466d 65726765 dermaf .MAFmerge\n+ 0x003f4468 3a20436f 756c6420 6e6f7420 6f70656e : Could not open\n+ 0x003f4478 206e6577 6d616620 00000000 4d41466d newmaf ....MAFm\n+ 0x003f4488 65726765 3a20436f 756c6420 6e6f7420 erge: Could not \n+ 0x003f4498 6f70656e 20626f64 796d6166 20000000 open bodymaf ...\n+ 0x003f44a8 4d41466d 65726765 3a20436f 756c6420 MAFmerge: Could \n+ 0x003f44b8 6e6f7420 66696e69 73682063 6f707969 not finish copyi\n+ 0x003f44c8 6e672074 6f200000 44696420 6e6f7420 ng to ..Did not \n+ 0x003f44d8 66696e64 20000000 75696e74 33322041 find ...uint32 A\n+ 0x003f44e8 7373656d 626c793a 3a6c7364 50617373 ssembly::lsdPass\n+ 0x003f44f8 496e666f 28636f6e 73742073 74643a3a Info(const std::\n+ 0x003f4508 73747269 6e672026 2066696c 656e616d string & filenam\n+ 0x003f4518 65290000 6e656761 74697665 2076616c e)..negative val\n+ 0x003f4528 75652069 6e200000 20697320 6e6f7420 ue in .. is not \n+ 0x003f4538 65787065 63746564 00000000 436f756c expected....Coul\n+ 0x003f4548 64206e6f 74207772 69746520 736e6170 d not write snap\n+ 0x003f4558 73686f74 20726561 64706f6f 6c3f0000 shot readpool?..\n+ 0x003f4568 766f6964 20417373 656d626c 793a3a73 void Assembly::s\n+ 0x003f4578 73645265 6164506f 6f6c2863 6f6e7374 sdReadPool(const\n+ 0x003f4588 20737464 3a3a7374 72696e67 20262066 std::string & f\n+ 0x003f4598 696c656e 616d6529 00000000 436f756c ilename)....Coul\n+ 0x003f45a8 64206e6f 74207772 69746520 736e6170 d not write snap\n+ 0x003f45b8 73686f74 20616374 70617373 3f000000 shot actpass?...\n+ 0x003f45c8 766f6964 20417373 656d626c 793a3a73 void Assembly::s\n+ 0x003f45d8 73645061 7373496e 666f2863 6f6e7374 sdPassInfo(const\n+ 0x003f45e8 20737464 3a3a7374 72696e67 20262066 std::string & f\n+ 0x003f45f8 696c656e 616d652c 2075696e 74333220 ilename, uint32 \n+ 0x003f4608 61637470 61737329 00000000 436f756c actpass)....Coul\n+ 0x003f4618 64206e6f 74207772 69746520 736e6170 d not write snap\n+ 0x003f4628 73686f74 206d6178 636f763f 00000000 shot maxcov?....\n+ 0x003f4638 766f6964 20417373 656d626c 793a3a73 void Assembly::s\n+ 0x003f4648 73644d61 78436f76 52656163 68656428 sdMaxCovReached(\n+ 0x003f4658 636f6e73 74207374 643a3a73 7472696e const std::strin\n+ 0x003f4668 67202620 66696c65 6e616d65 29000000 g & filename)...\n+ 0x003f4678 436f756c 64206e6f 74207772 69746520 Could not write \n+ 0x003f4688 736e6170 73686f74 2062616e 6e656420 snapshot banned \n+ 0x003f4698 6f766572 6c617073 3f000000 766f6964 overlaps?...void\n+ 0x003f46a8 20417373 656d626c 793a3a73 73644261 Assembly::ssdBa\n+ 0x003f46b8 6e6e6564 4f766572 6c617073 28636f6e nnedOverlaps(con\n+ 0x003f46c8 73742073 74643a3a 73747269 6e672026 st std::string &\n+ 0x003f46d8 2066696c 656e616d 65290000 4572726f filename)..Erro\n+ 0x003f46e8 72207768 696c6520 77726974 696e6720 r while writing \n+ 0x003f46f8 66696c65 20000000 2e204973 20746865 file .... Is the\n+ 0x003f4708 20646973 6b206675 6c6c3f20 41726520 disk full? Are \n+ 0x003f4718 7065726d 69737369 6f6e7320 72696768 permissions righ\n+ 0x003f4728 743f0000 766f6964 20417373 656d626c t?..void Assembl\n+ 0x003f4738 793a3a73 61766552 6573756d 65446174 y::saveResumeDat\n+ 0x003f4748 614d4128 29000000 44796e61 6d696320 aMA()...Dynamic \n+ 0x003f4758 7320616c 6c6f6373 3a200000 44796e61 s allocs: ..Dyna\n+ 0x003f4768 6d696320 6d20616c 6c6f6373 3a200000 mic m allocs: ..\n+ 0x003f4778 416c6967 6e20616c 6c6f6373 3a200000 Align allocs: ..\n+ 0x003f4788 75696e74 33322041 7373656d 626c793a uint32 Assembly:\n+ 0x003f4798 3a6c7364 4d617843 6f765265 61636865 :lsdMaxCovReache\n+ 0x003f47a8 6428636f 6e737420 7374643a 3a737472 d(const std::str\n+ 0x003f47b8 696e6720 26206669 6c656e61 6d652900 ing & filename).\n+ 0x003f47c8 656d7074 79206c69 6e652069 6e200000 empty line in ..\n+ 0x003f47d8 0a0a5365 61726368 696e6720 666f7220 ..Searching for \n+ 0x003f47e8 706f7373 69626c65 206f7665 726c6170 possible overlap\n+ 0x003f47f8 73000000 20286f6e 6c792061 6761696e s... (only again\n+ 0x003f4808 73742062 61636b62 6f6e652c 20746865 st backbone, the\n+ 0x003f4818 2070726f 67726573 73206261 72207769 progress bar wi\n+ 0x003f4828 6c6c2062 6520736b 65776564 29000000 ll be skewed)...\n+ 0x003f4838 5f6d6567 61687562 73000000 2e6c7374 _megahubs....lst\n+ 0x003f4848 00000000 0a0a5741 524e494e 47212121 ......WARNING!!!\n+ 0x003f4858 2121210a 596f7520 61726520 6e6f7420 !!!.You are not \n+ 0x003f4868 70657266 6f726d69 6e672061 20276d61 performing a 'ma\n+ 0x003f4878 7070696e 67206f6e 6c792720 61737365 pping only' asse\n+ 0x003f4888 6d626c79 20616e64 20746865 20706172 mbly and the par\n+ 0x003f4898 616d6574 6572730a 202d534b 3a627068 ameters. -SK:bph\n+ 0x003f48a8 3d000000 20616e64 202d534b 3a687373 =... and -SK:hss\n+ 0x003f48b8 3d000000 0a617265 20717569 7465206c =....are quite l\n+ 0x003f48c8 6f772e20 49662053 4b494d20 74616b65 ow. If SKIM take\n+ 0x003f48d8 73206167 65732c20 73746f70 20746869 s ages, stop thi\n+ 0x003f48e8 73206173 73656d62 6c792061 6e642072 s assembly and r\n+ 0x003f48f8 65737461 72742077 68696c65 0a696e63 estart while.inc\n+ 0x003f4908 72656173 696e6720 74686573 65207061 reasing these pa\n+ 0x003f4918 72616d65 74657273 2e0a0a00 43616e6e rameters....Cann\n+ 0x003f4928 6f742070 6572666f 726d2061 20736b69 ot perform a ski\n+ 0x003f4938 6d20616e 616c7973 69732077 69746820 m analysis with \n+ 0x003f4948 2d534b3a 62706820 3e203235 36202879 -SK:bph > 256 (y\n+ 0x003f4958 6f752075 73656420 00000000 292c2074 ou used ....), t\n+ 0x003f4968 686f7567 68204d49 52412073 686f756c hough MIRA shoul\n+ 0x003f4978 64277665 20666169 6c656420 6561726c d've failed earl\n+ 0x003f4988 6965722c 20492061 646d6974 2e0a0000 ier, I admit....\n+ 0x003f4998 766f6964 20417373 656d626c 793a3a66 void Assembly::f\n+ 0x003f49a8 706f5f6d 61696e28 696e7433 32207665 po_main(int32 ve\n+ 0x003f49b8 7273696f 6e2c2063 6f6e7374 20737464 rsion, const std\n+ 0x003f49c8 3a3a7374 72696e67 20707265 6669782c ::string prefix,\n+ 0x003f49d8 20636f6e 73742073 74643a3a 73747269 const std::stri\n+ 0x003f49e8 6e672070 6f737466 69782c20 636f6e73 ng postfix, cons\n+ 0x003f49f8 74207374 643a3a73 7472696e 6720746d t std::string tm\n+ 0x003f4a08 70666e61 6d652900 546f7461 6c206d65 pfname).Total me\n+ 0x003f4a18 67616875 62733a20 00000000 0a0a4d49 gahubs: ......MI\n+ 0x003f4a28 52412068 61732064 65746563 74656420 RA has detected \n+ 0x003f4a38 6d656761 68756273 20696e20 796f7572 megahubs in your\n+ 0x003f4a48 20646174 612e5468 6973206d 6179206e data.This may n\n+ 0x003f4a58 6f742062 65206120 70726f62 6c656d2c ot be a problem,\n+ 0x003f4a68 20627574 206d6f73 74207072 6f626162 but most probab\n+ 0x003f4a78 6c792069 732c2065 73706563 69616c6c ly is, especiall\n+ 0x003f4a88 7920666f 72206575 6b617279 6f746573 y for eukaryotes\n+ 0x003f4a98 2e0a0a00 0a0a596f 75206861 7665206d ......You have m\n+ 0x003f4aa8 6f726520 7468616e 20000000 25206f66 ore than ...% of\n+ 0x003f4ab8 20796f75 72207265 61647320 666f756e your reads foun\n+ 0x003f4ac8 6420746f 20626520 6d656761 68756273 d to be megahubs\n+ 0x003f4ad8 2e0a0a59 6f752073 686f756c 64206368 ...You should ch\n+ 0x003f4ae8 65636b20 74686520 666f6c6c 6f77696e eck the followin\n+ 0x003f4af8 673a0a0a 09312920 666f7220 53616e67 g:...1) for Sang\n+ 0x003f4b08 65722073 65717565 6e636573 3a206172 er sequences: ar\n+ 0x003f4b18 6520616c 6c207468 65207365 7175656e e all the sequen\n+ 0x003f4b28 63696e67 20766563 746f7273 206d6173 cing vectors mas\n+ 0x003f4b38 6b656420 2f20636c 69707065 643f0a09 ked / clipped?..\n+ 0x003f4b48 32292066 6f722034 35342073 65717565 2) for 454 seque\n+ 0x003f4b58 6e636573 3a206172 6520616c 6c207468 nces: are all th\n+ 0x003f4b68 65206164 6170746f 7273206d 61736b65 e adaptors maske\n+ 0x003f4b78 64202f20 636c6970 7065643f 0a0a0000 d / clipped?....\n+ 0x003f4b88 596f7520 77696c6c 2066696e 6420696e You will find in\n+ 0x003f4b98 20746865 20696e66 6f206469 72656374 the info direct\n+ 0x003f4ba8 6f727920 61206669 6c652063 616c6c65 ory a file calle\n+ 0x003f4bb8 640a2020 2020272a 5f696e66 6f5f7265 d. '*_info_re\n+ 0x003f4bc8 61647265 70656174 732e6c73 74272c0a adrepeats.lst',.\n+ 0x003f4bd8 636f6e73 756c7420 74686520 4d495241 consult the MIRA\n+ 0x003f4be8 206d616e 75616c20 6f6e2068 6f772074 manual on how t\n+ 0x003f4bf8 6f206578 74726163 74207265 70656174 o extract repeat\n+ 0x003f4c08 20696e66 6f726d61 74696f6e 2066726f information fro\n+ 0x003f4c18 6d207468 6572652e 0a0a0000 546f206c m there.....To l\n+ 0x003f4c28 6561726e 206d6f72 65206f6e 20746865 earn more on the\n+ 0x003f4c38 20747970 6573206f 66207265 70656174 types of repeat\n+ 0x003f4c48 7320796f 75206861 76652061 6e642068 s you have and h\n+ 0x003f4c58 6f77204d 4952410a 2063616e 2068656c ow MIRA. can hel\n+ 0x003f4c68 7020796f 7520746f 2066696e 64207468 p you to find th\n+ 0x003f4c78 656d2c20 706c6561 73652063 6f6e7375 em, please consu\n+ 0x003f4c88 6c742074 6865206d 616e7561 6c206f6e lt the manual on\n+ 0x003f4c98 20746865 0a207573 61676520 6f66202d the. usage of -\n+ 0x003f4ca8 48533a72 6c696966 20616e64 20746865 HS:rliif and the\n+ 0x003f4cb8 20746d70 2066696c 65732074 68657920 tmp files they \n+ 0x003f4cc8 63726561 74652e0a 00000000 2a4f4e4c create......*ONL\n+ 0x003f4cd8 592a2077 68656e20 796f7520 61726520 Y* when you are \n+ 0x003f4ce8 73757265 20746861 74206e6f 20286f72 sure that no (or\n+ 0x003f4cf8 206f6e6c 79206120 76657279 206e6567 only a very neg\n+ 0x003f4d08 6c696769 626c6520 6e756d62 65722920 ligible number) \n+ 0x003f4d18 6f662073 65717565 6e63696e 670a7665 of sequencing.ve\n+ 0x003f4d28 63746f72 202f2061 64617074 6f722073 ctor / adaptor s\n+ 0x003f4d38 65717565 6e636520 69732072 656d6169 equence is remai\n+ 0x003f4d48 6e696e67 2c207472 79207468 69733a0a ning, try this:.\n+ 0x003f4d58 0a093329 20666f72 206f7267 616e6973 ..3) for organis\n+ 0x003f4d68 6d732077 69746820 636f6d70 6c657820 ms with complex \n+ 0x003f4d78 72657065 61747320 2865756b 6172796f repeats (eukaryo\n+ 0x003f4d88 74732026 20736f6d 65206261 63746572 ts & some bacter\n+ 0x003f4d98 6961293a 0a000000 09092d20 75736520 ia):......- use \n+ 0x003f4da8 2d48533a 6d6e723d 7965730a 00000000 -HS:mnr=yes.....\n+ 0x003f4db8 09092d20 72656475 63652074 6865202d ..- reduce the -\n+ 0x003f4dc8 48533a6e 72722070 6172616d 65746572 HS:nrr parameter\n+ 0x003f4dd8 20286469 76696465 20627920 32290a0a (divide by 2)..\n+ 0x003f4de8 2a4f4e4c 592a2069 66207468 65206162 *ONLY* if the ab\n+ 0x003f4df8 6f766520 6661696c 732c2074 72792069 ove fails, try i\n+ 0x003f4e08 6e637265 6173696e 67207468 65202d53 ncreasing the -S\n+ 0x003f4e18 4b3a6d6d 68722070 6172616d 65746572 K:mmhr parameter\n+ 0x003f4e28 0a4e6f74 65207468 61742074 6865206e .Note that the n\n+ 0x003f4e38 756d6265 72206f66 20707265 73656e74 umber of present\n+ 0x003f4e48 206d6567 61687562 73207769 6c6c2069 megahubs will i\n+ 0x003f4e58 6e637265 61736520 636f6d70 75746174 ncrease computat\n+ 0x003f4e68 696f6e20 74696d65 20696e0a 616e2065 ion time in.an e\n+ 0x003f4e78 78706f6e 656e7469 616c2077 61792c20 xponential way, \n+ 0x003f4e88 736f2062 65206361 72656675 6c207768 so be careful wh\n+ 0x003f4e98 656e2063 68616e67 696e6720 2d534b3a en changing -SK:\n+ 0x003f4ea8 6d6d6872 2e0a0000 0a0a596f 75206861 mmhr......You ha\n+ 0x003f4eb8 76652000 25206f66 20796f75 72207265 ve .% of your re\n+ 0x003f4ec8 61647320 6173206d 65676168 7562732e ads as megahubs.\n+ 0x003f4ed8 0a000000 596f7520 68617665 20736574 ....You have set\n+ 0x003f4ee8 2061206d 6178696d 756d2061 6c6c6f77 a maximum allow\n+ 0x003f4ef8 65642072 6174696f 206f663a 20000000 ed ratio of: ...\n+ 0x003f4f08 0a546f20 6368616e 67652074 68697320 .To change this \n+ 0x003f4f18 72617469 6f2c2072 65616420 74686520 ratio, read the \n+ 0x003f4f28 74657874 2061626f 76652028 69742773 text above (it's\n+ 0x003f4f38 206b696e 64206f66 20696d70 6f727461 kind of importa\n+ 0x003f4f48 6e742920 616e6420 616c736f 20736565 nt) and also see\n+ 0x003f4f58 202d534b 3a6d6d68 72206174 206d756c -SK:mmhr at mul\n+ 0x003f4f68 7469706c 65206c6f 63617469 6f6e2069 tiple location i\n+ 0x003f4f78 6e207468 6520646f 63730a00 0a0a456e n the docs....En\n+ 0x003f4f88 64696e67 20746865 20617373 656d626c ding the assembl\n+ 0x003f4f98 79206265 63617573 65207468 65206d61 y because the ma\n+ 0x003f4fa8 78696d75 6d207261 74696f20 68617320 ximum ratio has \n+ 0x003f4fb8 6265656e 20726561 63686564 2f737572 been reached/sur\n+ 0x003f4fc8 70617373 65642e0a 00000000 736b696d passed......skim\n+ 0x003f4fd8 20646574 6563743a 20000000 5f6d756c detect: ..._mul\n+ 0x003f4fe8 7469636f 70797374 61740000 4572726f ticopystat..Erro\n+ 0x003f4ff8 72207768 696c6520 72656164 696e6720 r while reading \n+ 0x003f5008 66696c65 20000000 2e204973 20746865 file .... Is the\n+ 0x003f5018 2066696c 65207072 6573656e 7420616e file present an\n+ 0x003f5028 6420636f 72726563 743f2041 72652070 d correct? Are p\n+ 0x003f5038 65726d69 7373696f 6e732072 69676874 ermissions right\n+ 0x003f5048 3f000000 766f6964 20417373 656d626c ?...void Assembl\n+ 0x003f5058 793a3a6c 6f616452 6573756d 65446174 y::loadResumeDat\n+ 0x003f5068 6146504f 28290000 2e6f6b00 41535f72 aFPO()...ok.AS_r\n+ 0x003f5078 6573756d 65617365 6d626c79 20000000 esumeasembly ...\n+ 0x003f5088 52657375 6d652061 7373656d 626c793a Resume assembly:\n+ 0x003f5098 20736b69 6d20616e 6420736b 696d2072 skim and skim r\n+ 0x003f50a8 65647563 74696f6e 20616c72 65616479 eduction already\n+ 0x003f50b8 20707265 73656e74 2c20676f 6f642e0a present, good..\n+ 0x003f50c8 00000000 41535f72 6573756d 6569736f ....AS_resumeiso\n+ 0x003f50d8 6b200000 66696c65 45786973 74732800 k ..fileExists(.\n+ 0x003f50e8 656c6f67 2e6f636c 6576656c 5f706173 elog.oclevel_pas\n+ 0x003f50f8 73000000 70726f70 6f736564 20637574 s...proposed cut\n+ 0x003f5108 6261636b 2031613a 20000000 70726f70 back 1a: ...prop\n+ 0x003f5118 6f736564 20637574 6261636b 2031623a osed cutback 1b:\n+ 0x003f5128 20000000 4e6f2062 61736573 20636c69 ...No bases cli\n+ 0x003f5138 70706564 20696e20 66697273 74207065 pped in first pe\n+ 0x003f5148 6320726f 756e642c 20736b69 7070696e c round, skippin\n+ 0x003f5158 67207365 636f6e64 20726f75 6e642e0a g second round..\n+ 0x003f5168 00000000 5072652d 61737365 6d626c79 ....Pre-assembly\n+ 0x003f5178 20616c69 676e6d65 6e742073 65617263 alignment searc\n+ 0x003f5188 6820666f 72207265 61642065 7874656e h for read exten\n+ 0x003f5198 73696f6e 20616e64 202f206f 72207665 sion and / or ve\n+ 0x003f51a8 63746f72 20636c69 7070696e 673a0a00 ctor clipping:..\n+ 0x003f51b8 5f707265 61737365 6d626c79 00000000 _preassembly....\n+ 0x003f51c8 5f707265 61737365 6d626c79 31000000 _preassembly1...\n+ 0x003f51d8 5072652d 61737365 6d626c79 20726561 Pre-assembly rea\n+ 0x003f51e8 64206578 74656e73 696f6e3a 0a000000 d extension:....\n+ 0x003f51f8 5072652d 61737365 6d626c79 20766563 Pre-assembly vec\n+ 0x003f5208 746f7220 636c6970 70696e67 0a000000 tor clipping....\n+ 0x003f5218 5f707265 61737365 6d626c79 32000000 _preassembly2...\n+ 0x003f5228 70726f70 6f736564 20637574 6261636b proposed cutback\n+ 0x003f5238 20707265 61737365 6d626c79 3a200000 preassembly: ..\n+ 0x003f5248 75736572 20646566 696e6564 206b6d65 user defined kme\n+ 0x003f5258 72207365 72696573 2e0a0000 75736572 r series....user\n+ 0x003f5268 20646566 696e6564 206e756d 62657220 defined number \n+ 0x003f5278 6f662070 61737365 732e0a00 616c6c2d of passes...all-\n+ 0x003f5288 6175746f 20646574 65726d69 6e617469 auto determinati\n+ 0x003f5298 6f6e206f 66207061 73736573 20616e64 on of passes and\n+ 0x003f52a8 206b6d65 72207365 72696573 2e0a0000 kmer series....\n+ 0x003f52b8 4e756d62 6572206f 66207061 73736573 Number of passes\n+ 0x003f52c8 20757365 64206279 204d4952 413a2000 used by MIRA: .\n+ 0x003f52d8 0a6b6d65 72207365 72696573 3a200000 .kmer series: ..\n+ 0x003f52e8 2c200000 44696769 74616c20 6e6f726d , ..Digital norm\n+ 0x003f52f8 616c6973 6174696f 6e207363 68656475 alisation schedu\n+ 0x003f5308 6c656420 666f7220 70617373 20000000 led for pass ...\n+ 0x003f5318 766f6964 20417373 656d626c 793a3a6c void Assembly::l\n+ 0x003f5328 73644261 6e6e6564 4f766572 6c617073 sdBannedOverlaps\n+ 0x003f5338 28636f6e 73742073 74643a3a 73747269 (const std::stri\n+ 0x003f5348 6e672026 2066696c 656e616d 65290000 ng & filename)..\n+ 0x003f5358 656d7074 79206669 72737420 6c696e65 empty first line\n+ 0x003f5368 20696e20 00000000 66697273 74206c69 in ....first li\n+ 0x003f5378 6e652069 6e200000 2073686f 756c6420 ne in .. should \n+ 0x003f5388 68617665 206f6e65 20656c65 6d656e74 have one element\n+ 0x003f5398 206f6e6c 79000000 4661756c 74792066 only...Faulty f\n+ 0x003f53a8 69727374 206c696e 652c2068 6173206e irst line, has n\n+ 0x003f53b8 65676174 69766520 76616c75 65733a0a egative values:.\n+ 0x003f53c8 00000000 4572726f 72207265 6164696e ....Error readin\n+ 0x003f53d8 67206669 72737420 6c696e65 206f6620 g first line of \n+ 0x003f53e8 00000000 4f6f6f6f 6f6f6f70 732c2066 ....Ooooooops, f\n+ 0x003f53f8 69727374 206c696e 65207368 6f756c64 irst line should\n+ 0x003f5408 20686176 6520706f 73697469 7665206e have positive n\n+ 0x003f5418 756d6265 723a2000 4f6f6f6f 6f6f6f70 umber: .Ooooooop\n+ 0x003f5428 732c203a 2073697a 65206f66 20726561 s, : size of rea\n+ 0x003f5438 6420706f 6f6c2069 6e200000 29206973 d pool in ..) is\n+ 0x003f5448 206e6f74 20657175 616c2074 6f207369 not equal to si\n+ 0x003f5458 7a65206f 66206375 7272656e 74207265 ze of current re\n+ 0x003f5468 6164706f 6f6c2028 00000000 4661756c adpool (....Faul\n+ 0x003f5478 7479206c 696e652c 206e6565 64206d6f ty line, need mo\n+ 0x003f5488 72652065 6c656d65 6e74733a 0a000000 re elements:....\n+ 0x003f5498 4661756c 7479206c 696e652c 20686173 Faulty line, has\n+ 0x003f54a8 206e6567 61746976 65206669 72737420 negative first \n+ 0x003f54b8 76616c75 653a0a00 4f6f6f6f 6f6f6f70 value:..Ooooooop\n+ 0x003f54c8 732c2066 69727374 2076616c 75652073 s, first value s\n+ 0x003f54d8 686f756c 64207661 6c756520 3e3d2030 hould value >= 0\n+ 0x003f54e8 3a200000 4661756c 7479206c 696e652c : ..Faulty line,\n+ 0x003f54f8 20686173 206e6567 61746976 65207661 has negative va\n+ 0x003f5508 6c756573 3a0a0000 766f6964 20417373 lues:...void Ass\n+ 0x003f5518 656d626c 793a3a6c 6f616452 6573756d embly::loadResum\n+ 0x003f5528 65446174 614d4128 29000000 436f756c eDataMA()...Coul\n+ 0x003f5538 64206e6f 74206e6f 74206669 6e642064 d not not find d\n+ 0x003f5548 69726563 746f7279 20000000 20776869 irectory ... whi\n+ 0x003f5558 6c652074 7279696e 6720746f 20726573 le trying to res\n+ 0x003f5568 756d6520 74686520 61737365 6d626c79 ume the assembly\n+ 0x003f5578 2e204966 20796f75 20696e74 656e6465 . If you intende\n+ 0x003f5588 6420746f 20737461 72742061 206e6577 d to start a new\n+ 0x003f5598 20617373 656d626c 792c2064 6f206e6f assembly, do no\n+ 0x003f55a8 74207573 6520272d 72272028 72657375 t use '-r' (resu\n+ 0x003f55b8 6d652920 7768656e 20737461 7274696e me) when startin\n+ 0x003f55c8 67204d49 52412e00 41737365 6d626c79 g MIRA..Assembly\n+ 0x003f55d8 3a3a4173 73656d62 6c79284d 49524150 ::Assembly(MIRAP\n+ 0x003f55e8 6172616d 65746572 73202a20 70617261 arameters * para\n+ 0x003f55f8 6d732900 20776869 6c652074 7279696e ms). while tryin\n+ 0x003f5608 6720746f 20726573 756d6520 74686520 g to resume the \n+ 0x003f5618 61737365 6d626c79 2e205265 73756d69 assembly. Resumi\n+ 0x003f5628 6e672069 7320696d 706f7373 69626c65 ng is impossible\n+ 0x003f5638 2c20736f 7272792e 00000000 436f756c , sorry.....Coul\n+ 0x003f5648 64206e6f 74206465 6c657465 20616e64 d not delete and\n+ 0x003f5658 20726563 72656174 65207265 73756c74 recreate result\n+ 0x003f5668 73206469 72656374 6f727920 7768696c s directory whil\n+ 0x003f5678 65207472 79696e67 20746f20 72657375 e trying to resu\n+ 0x003f5688 6d652061 6e206173 73656d62 6c793f00 me an assembly?.\n+ 0x003f5698 54726965 6420746f 20747261 6e736665 Tried to transfe\n+ 0x003f56a8 72207461 67732074 6f206262 61636b62 r tags to bbackb\n+ 0x003f56b8 6f6e6520 636f6e74 69672072 65616420 one contig read \n+ 0x003f56c8 66726f6d 3a0a0000 45786974 696e672e from:...Exiting.\n+ 0x003f56d8 0a000000 766f6964 20417373 656d626c ....void Assembl\n+ 0x003f56e8 793a3a74 72616e73 66657243 6f6e7469 y::transferConti\n+ 0x003f56f8 67526561 64546167 73546f52 65616470 gReadTagsToReadp\n+ 0x003f5708 6f6f6c28 636f6e73 7420436f 6e746967 ool(const Contig\n+ 0x003f5718 20262063 6f6e2c20 636f6e73 74207374 & con, const st\n+ 0x003f5728 643a3a6c 6973743c 436f6e74 69673e3a d::list:\n+ 0x003f5738 3a636f6e 73745f69 74657261 746f7220 :const_iterator \n+ 0x003f5748 6262436f 6e746967 49290000 54726965 bbContigI)..Trie\n+ 0x003f5758 6420746f 20747261 6e736665 72207461 d to transfer ta\n+ 0x003f5768 67732074 6f207265 6164706f 6f6c2072 gs to readpool r\n+ 0x003f5778 65616420 66726f6d 3a0a0000 45786974 ead from:...Exit\n+ 0x003f5788 696e672e 00000000 4462673a 2077726f ing.....Dbg: wro\n+ 0x003f5798 6e672074 61672074 72616e73 66657220 ng tag transfer \n+ 0x003f57a8 666f7220 00000000 47656e65 72616c20 for ....General \n+ 0x003f57b8 6572726f 72207768 696c6520 7472616e error while tran\n+ 0x003f57c8 73666572 696e6720 74616720 00000000 sfering tag ....\n+ 0x003f57d8 20746f20 72656164 706f6f6c 20726561 to readpool rea\n+ 0x003f57e8 64206672 6f6d3a0a 00000000 50657266 d from:.....Perf\n+ 0x003f57f8 6f726d69 6e672073 6e617073 686f7420 orming snapshot \n+ 0x003f5808 00000000 436f756c 64206e6f 74206372 ....Could not cr\n+ 0x003f5818 65617465 206e6577 20736e61 7073686f eate new snapsho\n+ 0x003f5828 74206469 72656374 6f72793f 20446973 t directory? Dis\n+ 0x003f5838 6b206675 6c6c3f20 6368616e 67656420 k full? changed \n+ 0x003f5848 7065726d 69737369 6f6e733f 00000000 permissions?....\n+ 0x003f5858 766f6964 20417373 656d626c 793a3a70 void Assembly::p\n+ 0x003f5868 6572666f 726d536e 61707368 6f742875 erformSnapshot(u\n+ 0x003f5878 696e7433 32206163 74706173 73290000 int32 actpass)..\n+ 0x003f5888 626f6f73 743a3a66 696c6573 79737465 boost::filesyste\n+ 0x003f5898 6d3a3a64 69726563 746f7279 5f656e74 m::directory_ent\n+ 0x003f58a8 72792620 626f6f73 743a3a66 696c6573 ry& boost::files\n+ 0x003f58b8 79737465 6d3a3a64 69726563 746f7279 ystem::directory\n+ 0x003f58c8 5f697465 7261746f 723a3a64 65726566 _iterator::deref\n+ 0x003f58d8 6572656e 63652829 20636f6e 73740000 erence() const..\n+ 0x003f58e8 2f757372 2f696e63 6c756465 2f626f6f /usr/include/boo\n+ 0x003f58f8 73742f66 696c6573 79737465 6d2f6469 st/filesystem/di\n+ 0x003f5908 72656374 6f72792e 68707000 28216973 rectory.hpp.(!is\n+ 0x003f5918 5f656e64 28292926 26282261 7474656d _end())&&(\"attem\n+ 0x003f5928 70742074 6f206465 72656665 72656e63 pt to dereferenc\n+ 0x003f5938 6520656e 64206469 72656374 6f727920 e end directory \n+ 0x003f5948 69746572 61746f72 22290000 436f756c iterator\")..Coul\n+ 0x003f5958 64206e6f 74207265 6e616d65 20636865 d not rename che\n+ 0x003f5968 636b706f 696e7420 64697265 63746f72 ckpoint director\n+ 0x003f5978 7920696e 20707265 70617261 74696f6e y in preparation\n+ 0x003f5988 206f6620 73617669 6e67206e 65772063 of saving new c\n+ 0x003f5998 6865636b 706f696e 743f0a45 72726f72 heckpoint?.Error\n+ 0x003f59a8 206d6573 73616765 20697320 00000000 message is ....\n+ 0x003f59b8 436f756c 64206e6f 74207265 6e616d65 Could not rename\n+ 0x003f59c8 20636865 636b706f 696e7420 64697265 checkpoint dire\n+ 0x003f59d8 63746f72 7920696e 20707265 70617261 ctory in prepara\n+ 0x003f59e8 74696f6e 206f6620 73617669 6e67206e tion of saving n\n+ 0x003f59f8 65772063 6865636b 706f696e 743f0a55 ew checkpoint?.U\n+ 0x003f5a08 6e737065 63696669 65642065 78636570 nspecified excep\n+ 0x003f5a18 74696f6e 3f000000 436f756c 64206e6f tion?...Could no\n+ 0x003f5a28 7420726f 6c6c6261 636b2069 6e697469 t rollback initi\n+ 0x003f5a38 616c2063 6865636b 706f696e 74207265 al checkpoint re\n+ 0x003f5a48 6e616d65 3f0a4572 726f7220 6d657373 name?.Error mess\n+ 0x003f5a58 61676520 69732000 436f756c 64206e6f age is .Could no\n+ 0x003f5a68 7420726f 6c6c6261 636b2069 6e697469 t rollback initi\n+ 0x003f5a78 616c2063 6865636b 706f696e 74207265 al checkpoint re\n+ 0x003f5a88 6e616d65 3f0a556e 73706563 69666965 name?.Unspecifie\n+ 0x003f5a98 64206578 63657074 696f6e3f 00000000 d exception?....\n+ 0x003f5aa8 436f756c 64206e6f 7420636f 72726563 Could not correc\n+ 0x003f5ab8 746c7920 77726974 65206e65 7720736e tly write new sn\n+ 0x003f5ac8 61707368 6f742064 6174612e 20446973 apshot data. Dis\n+ 0x003f5ad8 6b206675 6c6c3f20 4368616e 67656420 k full? Changed \n+ 0x003f5ae8 7065726d 69737369 6f6e733f 00000000 permissions?....\n+ 0x003f5af8 4e6f772c 20746869 73206973 20656d62 Now, this is emb\n+ 0x003f5b08 61726173 73696e67 3a20636f 756c6420 arassing: could \n+ 0x003f5b18 6e6f7420 64656c65 74652066 61696c65 not delete faile\n+ 0x003f5b28 64206368 65636b70 6f696e74 20646972 d checkpoint dir\n+ 0x003f5b38 6563746f 72792e20 436f6e74 61637420 ectory. Contact \n+ 0x003f5b48 74686520 61757468 6f722e0a 4572726f the author..Erro\n+ 0x003f5b58 72206d65 73736167 65206973 20000000 r message is ...\n+ 0x003f5b68 4e6f772c 20746869 73206973 20656d62 Now, this is emb\n+ 0x003f5b78 61726173 73696e67 3a20636f 756c6420 arassing: could \n+ 0x003f5b88 6e6f7420 64656c65 74652066 61696c65 not delete faile\n+ 0x003f5b98 64206368 65636b70 6f696e74 20646972 d checkpoint dir\n+ 0x003f5ba8 6563746f 72792e20 436f6e74 61637420 ectory. Contact \n+ 0x003f5bb8 74686520 61757468 6f722e0a 6e556e73 the author..nUns\n+ 0x003f5bc8 70656369 66696564 20657863 65707469 pecified excepti\n+ 0x003f5bd8 6f6e3f00 4e6f772c 20746869 73206973 on?.Now, this is\n+ 0x003f5be8 20656d62 61726173 73696e67 3a20636f embarassing: co\n+ 0x003f5bf8 756c6420 6e6f7420 726f6c6c 6261636b uld not rollback\n+ 0x003f5c08 20636865 636b706f 696e7420 72656e61 checkpoint rena\n+ 0x003f5c18 6d652061 66746572 20666169 6c656420 me after failed \n+ 0x003f5c28 736e6170 73686f74 3f0a4572 726f7220 snapshot?.Error \n+ 0x003f5c38 6d657373 61676520 69732000 4e6f772c message is .Now,\n+ 0x003f5c48 20746869 73206973 20656d62 61726173 this is embaras\n+ 0x003f5c58 73696e67 3a20636f 756c6420 6e6f7420 sing: could not \n+ 0x003f5c68 726f6c6c 6261636b 20636865 636b706f rollback checkpo\n+ 0x003f5c78 696e7420 72656e61 6d652061 66746572 int rename after\n+ 0x003f5c88 20666169 6c656420 736e6170 73686f74 failed snapshot\n+ 0x003f5c98 3f0a556e 73706563 69666965 64206578 ?.Unspecified ex\n+ 0x003f5ca8 63657074 696f6e3f 00000000 596f7520 ception?....You \n+ 0x003f5cb8 73706563 69666965 64202d43 4c3a6672 specified -CL:fr\n+ 0x003f5cc8 726e613d 7965732c 20627574 204d4952 rna=yes, but MIR\n+ 0x003f5cd8 4120636f 756c6420 6e6f7420 66696e64 A could not find\n+ 0x003f5ce8 20746865 20646566 61756c74 2072524e the default rRN\n+ 0x003f5cf8 41206861 73682073 74617469 73746963 A hash statistic\n+ 0x003f5d08 73206669 6c652077 68696368 2073686f s file which sho\n+ 0x003f5d18 756c6420 6265206c 6f636174 65642061 uld be located a\n+ 0x003f5d28 74200000 41737365 6d626c79 3a3a6173 t ..Assembly::as\n+ 0x003f5d38 73656d62 6c652829 00000000 4e756d62 semble()....Numb\n+ 0x003f5d48 6572206f 6620524d 42206272 65616b20 er of RMB break \n+ 0x003f5d58 6c6f6f70 73203c31 2c207365 7474696e loops <1, settin\n+ 0x003f5d68 6720746f 20310a00 53746172 74206f66 g to 1..Start of\n+ 0x003f5d78 20626163 6b626f6e 65207573 61676520 backbone usage \n+ 0x003f5d88 3e206e75 6d626572 206f6620 70617373 > number of pass\n+ 0x003f5d98 65732c20 636f7272 65637469 6e672073 es, correcting s\n+ 0x003f5da8 74617274 20746f20 00000000 43616e27 tart to ....Can'\n+ 0x003f5db8 74206669 6e642069 6e666f20 61626f75 t find info abou\n+ 0x003f5dc8 74207379 7374656d 206f7220 70726f63 t system or proc\n+ 0x003f5dd8 65737320 6d656d6f 72792c20 73776974 ess memory, swit\n+ 0x003f5de8 6368696e 67206f66 66206175 746f6d61 ching off automa\n+ 0x003f5df8 7469630a 6d656d6f 7279206d 616e6167 tic.memory manag\n+ 0x003f5e08 656d656e 742e0a00 3435342c 20536f6c ement...454, Sol\n+ 0x003f5e18 65786120 6f722049 6f6e546f 7272656e exa or IonTorren\n+ 0x003f5e28 74206461 74612070 72657365 6e742c20 t data present, \n+ 0x003f5e38 73776974 6368696e 67206f66 66204741 switching off GA\n+ 0x003f5e48 50344441 20747970 65206f75 74707574 P4DA type output\n+ 0x003f5e58 20726573 756c7473 2028796f 75202a44 results (you *D\n+ 0x003f5e68 4f204e4f 542a2077 616e7420 6d696c6c O NOT* want mill\n+ 0x003f5e78 696f6e73 206f6620 66696c65 7320696e ions of files in\n+ 0x003f5e88 20612064 69726563 746f7279 2c207265 a directory, re\n+ 0x003f5e98 616c6c79 2e290a00 2d4f5554 3a6f7267 ally.)..-OUT:org\n+ 0x003f5ea8 3d6e6f3a 6f74673d 6e6f3a6f 6574673d =no:otg=no:oetg=\n+ 0x003f5eb8 6e6f0000 50524544 204d4158 54494420 no..PRED MAXTID \n+ 0x003f5ec8 00000000 2d44503a 75726520 74616b65 ....-DP:ure take\n+ 0x003f5ed8 73206566 66656374 206f6e6c 7920666f s effect only fo\n+ 0x003f5ee8 72205361 6e676572 20736571 75656e63 r Sanger sequenc\n+ 0x003f5ef8 65732e0a 00000000 2d434c3a 70766c63 es......-CL:pvlc\n+ 0x003f5f08 2074616b 65732065 66666563 74206f6e takes effect on\n+ 0x003f5f18 6c792066 6f722053 616e6765 72207365 ly for Sanger se\n+ 0x003f5f28 7175656e 6365732e 0a000000 596f7520 quences.....You \n+ 0x003f5f38 68617665 2073656c 65637465 6420746f have selected to\n+ 0x003f5f48 20686176 65203020 70617373 6573206f have 0 passes o\n+ 0x003f5f58 6e207468 65206173 73656d62 6c792c20 n the assembly, \n+ 0x003f5f68 74686572 65666f72 650a6a75 73742072 therefore.just r\n+ 0x003f5f78 756e6e69 6e672061 20636f75 706c6520 unning a couple \n+ 0x003f5f88 6f662068 61736820 73746174 69737469 of hash statisti\n+ 0x003f5f98 63732061 6e642069 6e666f20 666f7220 cs and info for \n+ 0x003f5fa8 72656164 20726570 65617473 2e0a2861 read repeats..(a\n+ 0x003f5fb8 6c736f20 70657266 6f726d69 6e672072 lso performing r\n+ 0x003f5fc8 61726520 6b6d6572 20636c69 70732069 are kmer clips i\n+ 0x003f5fd8 66207769 73686564 290a0000 0a0a5061 f wished).....Pa\n+ 0x003f5fe8 73733a20 00000000 202f2000 72656665 ss: .... / .refe\n+ 0x003f5ff8 72656e63 65207365 7175656e 6365203e rence sequence >\n+ 0x003f6008 3d313620 4d422c20 666f7263 696e6720 =16 MB, forcing \n+ 0x003f6018 6d696e69 6d756d20 62706820 6f662031 minimum bph of 1\n+ 0x003f6028 312e0a00 72656665 72656e63 65207365 1...reference se\n+ 0x003f6038 7175656e 6365203e 3d323520 4d422c20 quence >=25 MB, \n+ 0x003f6048 666f7263 696e6720 6d696e69 6d756d20 forcing minimum \n+ 0x003f6058 62706820 6f662031 332e0a00 6d6f7265 bph of 13...more\n+ 0x003f6068 20746861 6e203130 6d207265 6164732c than 10m reads,\n+ 0x003f6078 20666f72 63696e67 206d696e 696d756d forcing minimum\n+ 0x003f6088 20627068 206f6620 31312e0a 00000000 bph of 11......\n+ 0x003f6098 6d6f7265 20746861 6e203135 6d207265 more than 15m re\n+ 0x003f60a8 6164732c 20666f72 63696e67 206d696e ads, forcing min\n+ 0x003f60b8 696d756d 20627068 206f6620 31322e0a imum bph of 12..\n+ 0x003f60c8 00000000 6d6f7265 20746861 6e203230 ....more than 20\n+ 0x003f60d8 6d207265 6164732c 20666f72 63696e67 m reads, forcing\n+ 0x003f60e8 206d696e 696d756d 20627068 206f6620 minimum bph of \n+ 0x003f60f8 31332e0a 00000000 4175746f 6d617469 13......Automati\n+ 0x003f6108 63202d53 4b3a6270 68207365 7420746f c -SK:bph set to\n+ 0x003f6118 20000000 70617373 00000000 466f756e ...pass....Foun\n+ 0x003f6128 64200000 20696e63 6f727265 63746962 d .. incorrectib\n+ 0x003f6138 6c652072 65616420 656e6473 206f7220 le read ends or \n+ 0x003f6148 706f7373 69626c65 20636869 6d657261 possible chimera\n+ 0x003f6158 732e0a00 20746572 6d696e61 6c6c7920 s... terminally \n+ 0x003f6168 696e636f 72726563 7469626c 65207265 incorrectible re\n+ 0x003f6178 61647320 6f722070 6f737369 626c6520 ads or possible \n+ 0x003f6188 6368696d 65726173 2e0a0000 52657375 chimeras....Resu\n+ 0x003f6198 6d652061 7373656d 626c793a 20616c69 me assembly: ali\n+ 0x003f61a8 676e6d65 6e747320 616c7265 61647920 gnments already \n+ 0x003f61b8 70726573 656e742c 20676f6f 642e0a00 present, good...\n+ 0x003f61c8 52657065 61747320 666f756e 64206475 Repeats found du\n+ 0x003f61d8 72696e67 20636f6e 74696720 6275696c ring contig buil\n+ 0x003f61e8 64696e67 2c206164 64696e67 20616464 ding, adding add\n+ 0x003f61f8 6974696f 6e616c20 616c6967 6e6d656e itional alignmen\n+ 0x003f6208 74206974 65726174 696f6e0a 666f7220 t iteration.for \n+ 0x003f6218 71756963 6b207265 70656174 20726573 quick repeat res\n+ 0x003f6228 6f6c7669 6e672e0a 00000000 72657065 olving......repe\n+ 0x003f6238 61745f72 65736f6c 76650000 5365656e at_resolve..Seen\n+ 0x003f6248 20746572 6d696e61 74696f6e 20726571 termination req\n+ 0x003f6258 75657374 20627920 75736572 0a000000 uest by user....\n+ 0x003f6268 4368616e 67696e67 206e756d 62657220 Changing number \n+ 0x003f6278 6f662070 61737365 73206672 6f6d2000 of passes from .\n+ 0x003f6288 4e6f2066 75727468 65722061 6374696f No further actio\n+ 0x003f6298 6e206e65 63657373 6172792c 2077696c n necessary, wil\n+ 0x003f62a8 6c207465 726d696e 61746520 616e7977 l terminate anyw\n+ 0x003f62b8 61792069 6e203220 70617373 6573206d ay in 2 passes m\n+ 0x003f62c8 61782e0a 00000000 4572726f 72207768 ax......Error wh\n+ 0x003f62d8 696c6520 6c6f6164 696e6720 736e6170 ile loading snap\n+ 0x003f62e8 73686f74 206d6574 61646174 612c2072 shot metadata, r\n+ 0x003f62f8 6573756d 696e6720 61737365 6d626c79 esuming assembly\n+ 0x003f6308 20697320 6e6f7420 706f7373 69626c65 is not possible\n+ 0x003f6318 2c20736f 7272790a 00000000 74656d70 , sorry.....temp\n+ 0x003f6328 6c617465 203c636c 61737320 543e2053 late S\n+ 0x003f6338 7472696e 67436f6e 7461696e 65723c54 tringContainer::Entry Stri\n+ 0x003f6358 6e67436f 6e746169 6e65723c 543e3a3a ngContainer::\n+ 0x003f6368 61646445 6e747279 28636f6e 73742073 addEntry(const s\n+ 0x003f6378 74643a3a 73747269 6e672026 20732900 td::string & s).\n+ 0x003f6388 74656d70 6c617465 203c636c 61737320 template StringContain\n+ 0x003f63a8 65723c54 3e3a3a45 6e747279 3c543e20 er::Entry \n+ 0x003f63b8 53747269 6e67436f 6e746169 6e65723c StringContainer<\n+ 0x003f63c8 543e3a3a 61646445 6e747279 4e6f446f T>::addEntryNoDo\n+ 0x003f63d8 75626c65 43686563 6b28636f 6e737420 ubleCheck(const \n+ 0x003f63e8 7374643a 3a737472 696e6720 26207329 std::string & s)\n+ 0x003f63f8 00000000 696e6c69 6e652052 65616420 ....inline Read \n+ 0x003f6408 636f6e73 74202620 506c6163 6564436f const & PlacedCo\n+ 0x003f6418 6e746967 52656164 733a3a63 6f6e7374 ntigReads::const\n+ 0x003f6428 5f697465 7261746f 723a3a64 65726566 _iterator::deref\n+ 0x003f6438 6572656e 63652829 20636f6e 73740000 erence() const..\n+ 0x003f6448 54727969 6e672074 6f206465 72656665 Trying to derefe\n+ 0x003f6458 72656e63 6520616e 20697465 7261746f rence an iterato\n+ 0x003f6468 7220706f 696e7469 6e672074 6f20656e r pointing to en\n+ 0x003f6478 6428293f 3f3f0000 53432000 20697373 d()???..SC . iss\n+ 0x003f6488 6f727465 64202800 29206361 70616369 orted (.) capaci\n+ 0x003f6498 74792000 29207369 7a652000 09726177 ty .) size ..raw\n+ 0x003f64a8 3a000000 096f3a00 09737274 3a000000 :....o:..srt:...\n+ 0x003f64b8 436f756c 64206c6f 61642000 20656c65 Could load . ele\n+ 0x003f64c8 6d656e74 732c2062 75742066 696c6520 ments, but file \n+ 0x003f64d8 68617320 00000000 4f6f6f6f 70733f20 has ....Oooops? \n+ 0x003f64e8 476f696e 6720746f 20746872 6f772069 Going to throw i\n+ 0x003f64f8 6e206164 64456e74 72794e6f 446f7562 n addEntryNoDoub\n+ 0x003f6508 6c654368 65636b20 62656361 75736520 leCheck because \n+ 0x003f6518 6f662074 6869733a 0a000000 54726965 of this:....Trie\n+ 0x003f6528 6420746f 20616464 20270000 272c2062 d to add '..', b\n+ 0x003f6538 7574206d 6178206e 756d6265 72206f66 ut max number of\n+ 0x003f6548 20656e74 72696573 20280000 29207265 entries (..) re\n+ 0x003f6558 61636865 642e0a00 4f6f6f6f 6f6f7073 ached...Oooooops\n+ 0x003f6568 3f205343 5f746865 73747269 6e67732e ? SC_thestrings.\n+ 0x003f6578 73697a65 28293d3d 3020616e 64207374 size()==0 and st\n+ 0x003f6588 696c6c20 77616e74 20746f20 736f7274 ill want to sort\n+ 0x003f6598 3f3f3f00 4f6f6f6f 70733f20 476f696e ???.Oooops? Goin\n+ 0x003f65a8 6720746f 20746872 6f772069 6e206164 g to throw in ad\n+ 0x003f65b8 64456e74 72792062 65636175 7365206f dEntry because o\n+ 0x003f65c8 66207468 69733a20 00000000 4e35626f f this: ....N5bo\n+ 0x003f65d8 6f737436 73797374 656d3664 65746169 ost6system6detai\n+ 0x003f65e8 6c323173 79737465 6d5f6572 726f725f l21system_error_\n+ 0x003f65f8 63617465 676f7279 45000000 4e35626f categoryE...N5bo\n+ 0x003f6608 6f737439 616c676f 72697468 6d366465 ost9algorithm6de\n+ 0x003f6618 7461696c 3133746f 6b656e5f 66696e64 tail13token_find\n+ 0x003f6628 65724649 4e53315f 31306973 5f616e79 erFINS1_10is_any\n+ 0x003f6638 5f6f6646 49634545 45450000 00000000 _ofFIcEEEE......\n+ 0x003f6648 61000000 62000000 63000000 6a000000 a...b...c...j...\n+ 0x003f6658 07000000 21000000 0e000000 09000000 ....!...........\n+ 0x003f6668 4a000000 20000000 67000000 72000000 J... ...g...r...\n+ 0x003f6678 6f000000 68000000 12000000 59000000 o...h.......Y...\n+ 0x003f6688 10000000 27000000 08000000 11000000 ....'...........\n+ 0x003f6698 1b000000 24000000 26000000 71000000 ....$...&...q...\n+ 0x003f66a8 2b000000 54000000 19000000 04000000 +...T...........\n+ 0x003f66b8 16000000 1d000000 05000000 15000000 ................\n+ 0x003f66c8 5a000000 64000000 66000000 65000000 Z...d...f...e...\n+ 0x003f66d8 69000000 0a000000 43000000 25000000 i.......C...%...\n+ 0x003f66e8 3d000000 2a000000 5c000000 1c000000 =...*...\\.......\n+ 0x003f66f8 3f000000 06000000 13000000 02000000 ?...............\n+ 0x003f6708 03000000 14000000 58000000 3c000000 ........X...<...\n+ 0x003f6718 6b000000 0c000000 5f000000 7d000000 k......._...}...\n+ 0x003f6728 73000000 01000000 5f000000 0b000000 s......._.......\n+ 0x003f6738 82000000 0d000000 47000000 5d000000 ........G...]...\n+ 0x003f6748 1e000000 23000000 0b000000 22000000 ....#.......\"...\n+ 0x003f6758 83000000 3e000000 1a000000 6e000000 ....>.......n...\n+ 0x003f6768 17000000 18000000 1f000000 28000000 ............(...\n+ 0x003f6778 4b000000 5b000000 11000000 1f000000 K...[...........\n+ 0x003f6788 3f000000 7f000000 11000000 1f000000 ?...............\n+ 0x003f6798 3f000000 5f000000 11000000 1f000000 ?..._...........\n+ 0x003f67a8 35000000 4b000000 11000000 1f000000 5...K...........\n+ 0x003f67b8 35000000 11000000 1b000000 25000000 5...........%...\n+ 0x003f67c8 11000000 15000000 19000000 1f000000 ................\n+ 0x003f67d8 11000000 13000000 15000000 17000000 ................\n+ 0x003f67e8 11000000 15000000 1f000000 11000000 ................\n+ 0x003f67f8 13000000 17000000 0a63636f 6e207469 .........ccon ti\n+ 0x003f6808 6d696e67 733a2000 0a636374 20707265 mings: ..cct pre\n+ 0x003f6818 09000000 0a636374 20646972 09000000 .....cct dir....\n+ 0x003f6828 0a636374 20786375 09000000 0a636374 .cct xcu.....cct\n+ 0x003f6838 20746d70 09000000 0a636374 20737720 tmp.....cct sw \n+ 0x003f6848 09000000 0a636374 20706963 09000000 .....cct pic....\n+ 0x003f6858 0a636374 2069636f 09000000 0a636374 .cct ico.....cct\n+ 0x003f6868 2069636d 09000000 0a636374 20757064 icm.....cct upd\n+ 0x003f6878 09000000 0a636374 2064656c 09000000 .....cct del....\n+ 0x003f6888 0a636374 20726d7a 09000000 0a636374 .cct rmz.....cct\n+ 0x003f6898 20676370 09000000 0a63636f 6e206920 gcp.....ccon i \n+ 0x003f68a8 74696d69 6e677320 28000000 0a636369 timings (....cci\n+ 0x003f68b8 7420696e 73676c63 63090000 0a636369 t insglcc....cci\n+ 0x003f68c8 7420696e 73676c61 726f0900 0a636369 t insglaro...cci\n+ 0x003f68d8 7420696e 73676c61 63740900 0a636369 t insglact...cci\n+ 0x003f68e8 7420696e 73676c74 6f740900 0a636369 t insgltot...cci\n+ 0x003f68f8 74207072 09090000 0a636369 74207465 t pr.....ccit te\n+ 0x003f6908 6d706c09 00000000 0a636369 7420696e mpl......ccit in\n+ 0x003f6918 64657809 00000000 0a636369 74206269 dex......ccit bi\n+ 0x003f6928 676c6363 696e7309 00000000 0a636369 glccins......cci\n+ 0x003f6938 74206269 676c696e 74657270 6f6c0900 t biglinterpol..\n+ 0x003f6948 0a636369 74206269 676c7570 64746167 .ccit biglupdtag\n+ 0x003f6958 73090000 0a636369 74206269 676c6670 s....ccit biglfp\n+ 0x003f6968 63726909 00000000 0a636369 74206269 cri......ccit bi\n+ 0x003f6978 676c6c67 61700900 0a636369 74206269 gllgap...ccit bi\n+ 0x003f6988 676c7368 69667472 65616409 00000000 glshiftread.....\n+ 0x003f6998 0a636369 74206269 676c746f 74090000 .ccit bigltot...\n+ 0x003f69a8 0a636369 7420696e 73677209 00000000 .ccit insgr.....\n+ 0x003f69b8 0a636369 74207563 76090000 0a63636f .ccit ucv....cco\n+ 0x003f69c8 6e206420 74696d69 6e677320 28000000 n d timings (...\n+ 0x003f69d8 0a636364 74207562 6c090000 0a636364 .ccdt ubl....ccd\n+ 0x003f69e8 74207563 76090000 0a636364 74206974 t ucv....ccdt it\n+ 0x003f69f8 66090000 0a636364 74206974 62090000 f....ccdt itb...\n+ 0x003f6a08 0a636364 74206363 65660900 0a636364 .ccdt ccef...ccd\n+ 0x003f6a18 74206363 65620900 0a636364 74207364 t cceb...ccdt sd\n+ 0x003f6a28 74090000 0a636364 74207372 09090000 t....ccdt sr....\n+ 0x003f6a38 0a636364 7420736d 70090000 0a636364 .ccdt smp....ccd\n+ 0x003f6a48 74206474 09090000 0a636364 74207272 t dt.....ccdt rr\n+ 0x003f6a58 09090000 0a636364 74206473 6f630900 .....ccdt dsoc..\n+ 0x003f6a68 0a636364 7420746f 74616c09 00000000 .ccdt total.....\n+ 0x003f6a78 434f4e5f 616c6c61 646a7573 746d656e CON_alladjustmen\n+ 0x003f6a88 74732e65 6d707479 28293f00 696e7433 ts.empty()?.int3\n+ 0x003f6a98 3220436f 6e746967 3a3a7061 64646564 2 Contig::padded\n+ 0x003f6aa8 506f7332 556e7061 64646564 506f7328 Pos2UnpaddedPos(\n+ 0x003f6ab8 75696e74 33322070 6164706f 73290000 uint32 padpos)..\n+ 0x003f6ac8 5265646f 20666f72 20506c61 63656443 Redo for PlacedC\n+ 0x003f6ad8 6f6e7469 67526561 64730000 7374643a ontigReads..std:\n+ 0x003f6ae8 3a766563 746f723c 696e7433 323e2026 :vector &\n+ 0x003f6af8 20436f6e 7469673a 3a676574 4352496e Contig::getCRIn\n+ 0x003f6b08 64696365 73417443 6f6e7469 67506f73 dicesAtContigPos\n+ 0x003f6b18 6974696f 6e287374 643a3a76 6563746f ition(std::vecto\n+ 0x003f6b28 723c696e 7433323e 20262076 65632c20 r & vec, \n+ 0x003f6b38 696e7433 3220706f 73312c20 696e7433 int32 pos1, int3\n+ 0x003f6b48 3220706f 73322920 636f6e73 74000000 2 pos2) const...\n+ 0x003f6b58 766f6964 20436f6e 7469673a 3a64656c void Contig::del\n+ 0x003f6b68 65746542 61736549 6e526561 6428696e eteBaseInRead(in\n+ 0x003f6b78 74333220 636f6e74 6967706f 73697469 t32 contigpositi\n+ 0x003f6b88 6f6e2c20 696e7433 32207265 6164696e on, int32 readin\n+ 0x003f6b98 64657829 00000000 766f6964 20436f6e dex)....void Con\n+ 0x003f6ba8 7469673a 3a696e73 65727442 61736549 tig::insertBaseI\n+ 0x003f6bb8 6e526561 64286368 61722062 6173652c nRead(char base,\n+ 0x003f6bc8 20626173 655f7175 616c6974 795f7420 base_quality_t \n+ 0x003f6bd8 7175616c 6974792c 20696e74 33322063 quality, int32 c\n+ 0x003f6be8 6f6e7469 67706f73 6974696f 6e2c2069 ontigposition, i\n+ 0x003f6bf8 6e743332 20726561 64696e64 65782900 nt32 readindex).\n+ 0x003f6c08 52656164 20646f65 73206e6f 7420636f Read does not co\n+ 0x003f6c18 76657220 67697665 6e20636f 6e746967 ver given contig\n+ 0x003f6c28 706f7369 74696f6e 00000000 63686172 position....char\n+ 0x003f6c38 20436f6e 7469673a 3a676574 42617365 Contig::getBase\n+ 0x003f6c48 496e5265 61642863 6f6e7374 20696e74 InRead(const int\n+ 0x003f6c58 33322063 6f6e7469 67706f73 6974696f 32 contigpositio\n+ 0x003f6c68 6e2c2063 6f6e7374 20506c61 63656443 n, const PlacedC\n+ 0x003f6c78 6f6e7469 67526561 64733a3a 636f6e73 ontigReads::cons\n+ 0x003f6c88 745f6974 65726174 6f722026 20706372 t_iterator & pcr\n+ 0x003f6c98 49292063 6f6e7374 00000000 63686172 I) const....char\n+ 0x003f6ca8 20436f6e 7469673a 3a676574 5175616c Contig::getQual\n+ 0x003f6cb8 69747949 6e526561 6428696e 74333220 ityInRead(int32 \n+ 0x003f6cc8 636f6e74 6967706f 73697469 6f6e2c20 contigposition, \n+ 0x003f6cd8 696e7433 32207265 6164696e 64657829 int32 readindex)\n+ 0x003f6ce8 00000000 766f6964 20436f6e 7469673a ....void Contig:\n+ 0x003f6cf8 3a636861 6e676542 61736549 6e526561 :changeBaseInRea\n+ 0x003f6d08 64286368 61722062 6173652c 20626173 d(char base, bas\n+ 0x003f6d18 655f7175 616c6974 795f7420 7175616c e_quality_t qual\n+ 0x003f6d28 6974792c 20696e74 33322063 6f6e7469 ity, int32 conti\n+ 0x003f6d38 67706f73 6974696f 6e2c2069 6e743332 gposition, int32\n+ 0x003f6d48 20726561 64696e64 65782900 766f6964 readindex).void\n+ 0x003f6d58 20436f6e 7469673a 3a616464 54616754 Contig::addTagT\n+ 0x003f6d68 6f526561 6428696e 74333220 636f6e74 oRead(int32 cont\n+ 0x003f6d78 6967706f 73697469 6f6e6672 6f6d2c20 igpositionfrom, \n+ 0x003f6d88 696e7433 3220636f 6e746967 706f7369 int32 contigposi\n+ 0x003f6d98 74696f6e 746f2c20 696e7433 32207265 tionto, int32 re\n+ 0x003f6da8 6164696e 6465782c 20636f6e 7374206d adindex, const m\n+ 0x003f6db8 756c7469 74616720 26206d74 29000000 ultitag & mt)...\n+ 0x003f6dc8 636f6e74 6967706f 73203e20 73697a65 contigpos > size\n+ 0x003f6dd8 206f6620 636f6e74 69670000 766f6964 of contig..void\n+ 0x003f6de8 20436f6e 7469673a 3a757064 61746554 Contig::updateT\n+ 0x003f6df8 6167496e 73657274 2875696e 74333220 agInsert(uint32 \n+ 0x003f6e08 636f6e74 6967706f 73290000 766f6964 contigpos)..void\n+ 0x003f6e18 20436f6e 7469673a 3a747261 6e73706f Contig::transpo\n+ 0x003f6e28 73655265 61645352 4d546167 73546f43 seReadSRMTagsToC\n+ 0x003f6e38 6f6e7469 67282900 092b0a00 092d096e ontig()..+...-.n\n+ 0x003f6e48 6f742063 616c6c65 640a0000 092d096e ot called....-.n\n+ 0x003f6e58 6f20616c 69676e20 666f756e 640a0000 o align found...\n+ 0x003f6e68 092d0964 726f7020 696e2072 656c7363 .-.drop in relsc\n+ 0x003f6e78 6f726520 746f6f20 68696768 0a000000 ore too high....\n+ 0x003f6e88 092d0961 6c69676e 2072656a 65637465 .-.align rejecte\n+ 0x003f6e98 64206279 206d7273 0a000000 092d0974 d by mrs.....-.t\n+ 0x003f6ea8 656d706c 61746520 696e2077 726f6e67 emplate in wrong\n+ 0x003f6eb8 20646972 65637469 6f6e0a00 092d0970 direction...-.p\n+ 0x003f6ec8 6c616365 6d656e74 206f6620 7365676d lacement of segm\n+ 0x003f6ed8 656e7420 77726f6e 670a0000 092d096d ent wrong....-.m\n+ 0x003f6ee8 69736d61 74636820 696e2074 656d706c ismatch in templ\n+ 0x003f6ef8 61746520 73697a65 20283c29 0a000000 ate size (<)....\n+ 0x003f6f08 092d096d 69736d61 74636820 696e2074 .-.mismatch in t\n+ 0x003f6f18 656d706c 61746520 73697a65 20283e29 emplate size (>)\n+ 0x003f6f28 0a000000 092d096d 69736d61 74636820 .....-.mismatch \n+ 0x003f6f38 696e2053 524d4220 7a6f6e65 0a000000 in SRMB zone....\n+ 0x003f6f48 092d0966 61696c65 64207370 65636961 .-.failed specia\n+ 0x003f6f58 6c205352 20616464 2072756c 65730a00 l SR add rules..\n+ 0x003f6f68 092d0972 65666964 206e6f74 20616c6c .-.refid not all\n+ 0x003f6f78 6f776564 0a000000 092d096d 6178636f owed.....-.maxco\n+ 0x003f6f88 76657261 67652072 65616368 65640a00 verage reached..\n+ 0x003f6f98 092d0974 6f6f206d 616e7920 6d69736d .-.too many mism\n+ 0x003f6fa8 61746368 65732069 6e206461 6e676572 atches in danger\n+ 0x003f6fb8 207a6f6e 65287329 0a000000 092d0966 zone(s).....-.f\n+ 0x003f6fc8 6f726365 64206772 6f777468 206e6f74 orced growth not\n+ 0x003f6fd8 20726561 63686564 0a000000 092d0967 reached.....-.g\n+ 0x003f6fe8 726f7774 68206e6f 7420616c 6c6f7765 rowth not allowe\n+ 0x003f6ff8 640a0000 092d0972 656c6567 61746564 d....-.relegated\n+ 0x003f7008 0a000000 092d0975 6e737065 63696669 .....-.unspecifi\n+ 0x003f7018 65642072 656a6563 740a0000 556e6b6e ed reject...Unkn\n+ 0x003f7028 6f776e20 6572726f 72636f64 65206672 own errorcode fr\n+ 0x003f7038 6f6d2074 68652063 6f6e7469 67206f62 om the contig ob\n+ 0x003f7048 6a656374 2e000000 766f6964 20436f6e ject....void Con\n+ 0x003f7058 7469673a 3a657272 6f727374 61747573 tig::errorstatus\n+ 0x003f7068 5f743a3a 64756d70 53746174 75732863 _t::dumpStatus(c\n+ 0x003f7078 6f6e7374 20636861 72202a20 61646469 onst char * addi\n+ 0x003f7088 74696f6e 616c6d73 67290000 54727969 tionalmsg)..Tryi\n+ 0x003f7098 6e672074 6f206375 74206261 636b206f ng to cut back o\n+ 0x003f70a8 74686572 20746861 6e20536f 6c657861 ther than Solexa\n+ 0x003f70b8 202f2053 4f4c6944 203f0000 766f6964 / SOLiD ?..void\n+ 0x003f70c8 20436f6e 7469673a 3a616e61 6c797365 Contig::analyse\n+ 0x003f70d8 41445346 6f724375 7474696e 67426163 ADSForCuttingBac\n+ 0x003f70e8 6b434552 4d617028 636f6e73 7420416c kCERMap(const Al\n+ 0x003f70f8 69676e65 64447561 6c536571 20262061 ignedDualSeq & a\n+ 0x003f7108 64732c20 696e7433 32206469 72656374 ds, int32 direct\n+ 0x003f7118 696f6e5f 66726e69 64290000 7175616c ion_frnid)..qual\n+ 0x003f7128 69747920 6f757420 6f662062 6f756e64 ity out of bound\n+ 0x003f7138 733f2032 00000000 766f6964 20436f6e s? 2....void Con\n+ 0x003f7148 7469673a 3a757064 61746554 61674261 tig::updateTagBa\n+ 0x003f7158 73654465 6c657465 64287569 6e743332 seDeleted(uint32\n+ 0x003f7168 20636f6e 74696770 6f732900 5f646e00 contigpos)._dn.\n+ 0x003f7178 5f726570 5f630000 5f730000 434f4e5f _rep_c.._s..CON_\n+ 0x003f7188 636f756e 74732e73 697a6528 293d3d30 counts.size()==0\n+ 0x003f7198 203f3f3f 00000000 766f6964 20436f6e ???....void Con\n+ 0x003f71a8 7469673a 3a627569 6c644d61 736b5368 tig::buildMaskSh\n+ 0x003f71b8 61646f77 28737464 3a3a7665 63746f72 adow(std::vector\n+ 0x003f71c8 3c696e74 383e2026 206d6173 6b736861 & masksha\n+ 0x003f71d8 646f772c 20737464 3a3a7665 63746f72 dow, std::vector\n+ 0x003f71e8 3c737472 696e673e 2026206d 61736b74 & maskt\n+ 0x003f71f8 61677374 72696e67 73290000 7374646e agstrings)..stdn\n+ 0x003f7208 616d6500 6e657769 64735b6e 695d3e3d ame.newids[ni]>=\n+ 0x003f7218 20726576 65727365 6d61702e 73697a65 reversemap.size\n+ 0x003f7228 2829203f 3f3f0000 766f6964 20436f6e () ???..void Con\n+ 0x003f7238 7469673a 3a657863 68616e67 65526561 tig::exchangeRea\n+ 0x003f7248 64494473 28737464 3a3a7665 63746f72 dIDs(std::vector\n+ 0x003f7258 3c75696e 7433323e 2026206e 65776964 & newid\n+ 0x003f7268 73290000 6372492d 3e6f7270 6964203e s)..crI->orpid >\n+ 0x003f7278 3d206e65 77696473 2e73697a 65282920 = newids.size() \n+ 0x003f7288 3f3f3f00 766f6964 20436f6e 7469673a ???.void Contig:\n+ 0x003f7298 3a726563 616c6354 656d706c 61746549 :recalcTemplateI\n+ 0x003f72a8 4473416e 64537472 61696e50 72657365 DsAndStrainPrese\n+ 0x003f72b8 6e742829 00000000 706f7331 203c2030 nt()....pos1 < 0\n+ 0x003f72c8 3f000000 766f6964 20436f6e 7469673a ?...void Contig:\n+ 0x003f72d8 3a676574 50435249 74657261 746f7273 :getPCRIterators\n+ 0x003f72e8 4174436f 6e746967 506f7369 74696f6e AtContigPosition\n+ 0x003f72f8 28737464 3a3a7665 63746f72 3c506c61 (std::vector \n+ 0x003f7328 26207665 632c2069 6e743332 20706f73 & vec, int32 pos\n+ 0x003f7338 312c2069 6e743332 20706f73 32292063 1, int32 pos2) c\n+ 0x003f7348 6f6e7374 00000000 706f7331 203e2073 onst....pos1 > s\n+ 0x003f7358 697a6520 6f662063 6f6e7469 673f0000 ize of contig?..\n+ 0x003f7368 706f7332 203c2070 6f733100 203e3d45 pos2 < pos1. >=E\n+ 0x003f7378 52434349 5f706372 495f7374 5f73742e RCCI_pcrI_st_st.\n+ 0x003f7388 73697a65 28292000 766f6964 20436f6e size() .void Con\n+ 0x003f7398 7469673a 3a657263 63695f74 3a3a7570 tig::ercci_t::up\n+ 0x003f73a8 64617465 28290000 73747261 696e6964 date()..strainid\n+ 0x003f73b8 20000000 203e3d45 52434349 5f706372 ... >=ERCCI_pcr\n+ 0x003f73c8 495f7374 5f73745b 73657174 7970655d I_st_st[seqtype]\n+ 0x003f73d8 2e73697a 65282920 00000000 6e756d73 .size() ....nums\n+ 0x003f73e8 74726169 6e733d3d 303f3f3f 00000000 trains==0???....\n+ 0x003f73f8 766f6964 20436f6e 7469673a 3a657263 void Contig::erc\n+ 0x003f7408 63695f74 3a3a696e 69742862 6f6f6c20 ci_t::init(bool \n+ 0x003f7418 74616b65 7261696c 732c2062 6f6f6c20 takerails, bool \n+ 0x003f7428 74616b65 6261636b 626f6e65 732c2075 takebackbones, u\n+ 0x003f7438 696e7433 32206e75 6d737472 61696e73 int32 numstrains\n+ 0x003f7448 29000000 636f7674 61726765 742e7369 )...covtarget.si\n+ 0x003f7458 7a652829 213d5265 61644772 6f75704c ze()!=ReadGroupL\n+ 0x003f7468 69623a3a 53455154 5950455f 454e4420 ib::SEQTYPE_END \n+ 0x003f7478 3f3f0000 766f6964 20436f6e 7469673a ??..void Contig:\n+ 0x003f7488 3a736574 436f6e74 6967436f 76657261 :setContigCovera\n+ 0x003f7498 67655461 72676574 28737464 3a3a7665 geTarget(std::ve\n+ 0x003f74a8 63746f72 3c75696e 74333229 00000000 ctor & vec, int\n+ 0x003f7508 33322070 6f73312c 20696e74 33322070 32 pos1, int32 p\n+ 0x003f7518 6f733229 20636f6e 73740000 29203e20 os2) const..) > \n+ 0x003f7528 73697a65 206f6620 636f6e74 69672028 size of contig (\n+ 0x003f7538 00000000 706f7332 20280000 29203c20 ....pos2 (..) < \n+ 0x003f7548 706f7331 20280000 21434f4e 5f726561 pos1 (..!CON_rea\n+ 0x003f7558 64706f6f 6c2d3e67 65745265 61642872 dpool->getRead(r\n+ 0x003f7568 65666964 292e6973 5261696c 2829203f efid).isRail() ?\n+ 0x003f7578 3f3f0000 766f6964 20436f6e 7469673a ??..void Contig:\n+ 0x003f7588 3a676574 5261696c 73417352 65616473 :getRailsAsReads\n+ 0x003f7598 41666665 63746564 28636f6e 73742069 Affected(const i\n+ 0x003f75a8 6e743332 20726566 69642c20 7374643a nt32 refid, std:\n+ 0x003f75b8 3a766563 746f723c 696e7433 323e2026 :vector &\n+ 0x003f75c8 20726561 64735f61 66666563 74656429 reads_affected)\n+ 0x003f75d8 00000000 434f4e5f 6c6f6e67 65737472 ....CON_longestr\n+ 0x003f75e8 61696c73 65656e3d 3d303f3f 3f000000 ailseen==0???...\n+ 0x003f75f8 42554720 42554720 42554720 42554720 BUG BUG BUG BUG \n+ 0x003f7608 4255470a 00000000 53656172 63686564 BUG.....Searched\n+ 0x003f7618 20666f72 2072616e 67652000 434f4e5f for range .CON_\n+ 0x003f7628 6c6f6e67 65737472 61696c73 65656e3a longestrailseen:\n+ 0x003f7638 20000000 46697273 74205043 52493a20 ...First PCRI: \n+ 0x003f7648 00000000 49276d20 6f6e2061 20627261 ....I'm on a bra\n+ 0x003f7658 6e636820 49207368 6f756c64 6e277420 nch I shouldn't \n+ 0x003f7668 62652e20 5265616c 6c792100 766f6964 be. Really!.void\n+ 0x003f7678 20436f6e 7469673a 3a696e74 6572706f Contig::interpo\n+ 0x003f7688 6c617465 53524d56 616c7565 73496e43 lateSRMValuesInC\n+ 0x003f7698 4f4e636f 756e7473 28636363 6f6e7461 ONcounts(ccconta\n+ 0x003f76a8 696e6572 5f743a3a 69746572 61746f72 iner_t::iterator\n+ 0x003f76b8 20636349 29000000 6164732e 6765744f ccI)...ads.getO\n+ 0x003f76c8 66667365 74496e41 6c69676e 6d656e74 ffsetInAlignment\n+ 0x003f76d8 282d3129 203e2030 203f0000 626f6f6c (-1) > 0 ?..bool\n+ 0x003f76e8 20436f6e 7469673a 3a696e73 6572744d Contig::insertM\n+ 0x003f76f8 61707065 64526561 64496e43 6f6e7469 appedReadInConti\n+ 0x003f7708 6728636f 6e737420 416c6967 6e656444 g(const AlignedD\n+ 0x003f7718 75616c53 65712026 20616473 2c20636f ualSeq & ads, co\n+ 0x003f7728 6e737420 75696e74 38206e65 77726561 nst uint8 newrea\n+ 0x003f7738 64736571 74797065 2c20636f 6e737420 dseqtype, const \n+ 0x003f7748 75696e74 33322063 6f666673 65742c20 uint32 coffset, \n+ 0x003f7758 636f6e73 7420696e 74333220 64697265 const int32 dire\n+ 0x003f7768 6374696f 6e5f6672 6e69642c 20696e74 ction_frnid, int\n+ 0x003f7778 33322063 6f766572 6167656d 756c7469 32 coveragemulti\n+ 0x003f7788 706c6965 722c2062 6f6f6c20 666f7263 plier, bool forc\n+ 0x003f7798 656d6572 67652900 6164732e 67657452 emerge).ads.getR\n+ 0x003f77a8 69676874 4f666673 6574496e 416c6967 ightOffsetInAlig\n+ 0x003f77b8 6e6d656e 74282d31 29203e20 30203f00 nment(-1) > 0 ?.\n+ 0x003f77c8 54727969 6e672074 6f206d61 70206f74 Trying to map ot\n+ 0x003f77d8 68657220 7468616e 20536f6c 65786120 her than Solexa \n+ 0x003f77e8 2f20534f 4c694420 3f000000 4d617070 / SOLiD ?...Mapp\n+ 0x003f77f8 696e6720 3e3d3820 536f6c65 78612073 ing >=8 Solexa s\n+ 0x003f7808 74726169 6e733f20 536f7272 792c206e trains? Sorry, n\n+ 0x003f7818 6f742070 6f737369 626c6520 7965742e ot possible yet.\n+ 0x003f7828 00000000 75696e74 3820436f 6e746967 ....uint8 Contig\n+ 0x003f7838 3a3a6765 74424253 74726169 6e4d6173 ::getBBStrainMas\n+ 0x003f7848 6b28696e 74333220 73747261 696e6964 k(int32 strainid\n+ 0x003f7858 29000000 696e6465 78696e63 6f6e7469 )...indexinconti\n+ 0x003f7868 673a2000 0a434f4e 5f636f75 6e74732e g: ..CON_counts.\n+ 0x003f7878 73697a65 28292b31 3a200000 424f554e size()+1: ..BOUN\n+ 0x003f7888 44434845 434b2065 72726f72 00000000 DCHECK error....\n+ 0x003f7898 21666f72 63656d65 72676520 2626202a !forcemerge && *\n+ 0x003f78a8 636f6e74 69677074 723d3d27 2a27203f contigptr=='*' ?\n+ 0x003f78b8 00000000 63686b20 31207176 49200000 ....chk 1 qvI ..\n+ 0x003f78c8 206f7574 206f6620 626f756e 64732077 out of bounds w\n+ 0x003f78d8 72742000 63686b20 32207176 49200000 rt .chk 2 qvI ..\n+ 0x003f78e8 7175616c 63686b20 31203e31 30300000 qualchk 1 >100..\n+ 0x003f78f8 63686b20 33207176 49200000 7175616c chk 3 qvI ..qual\n+ 0x003f7908 63686b20 32203e31 30300000 766f6964 chk 2 >100..void\n+ 0x003f7918 20436f6e 7469673a 3a757064 61746543 Contig::updateC\n+ 0x003f7928 6f756e74 56656374 6f727328 636f6e73 ountVectors(cons\n+ 0x003f7938 7420696e 74333220 66726f6d 2c20636f t int32 from, co\n+ 0x003f7948 6e737420 696e7433 32206c65 6e2c2073 nst int32 len, s\n+ 0x003f7958 74643a3a 76656374 6f723c63 6861723e td::vector\n+ 0x003f7968 3a3a636f 6e73745f 69746572 61746f72 ::const_iterator\n+ 0x003f7978 20757064 61746549 2c20636f 6e737420 updateI, const \n+ 0x003f7988 75696e74 33322073 65717479 70652c20 uint32 seqtype, \n+ 0x003f7998 636f6e73 7420626f 6f6c2061 64646966 const bool addif\n+ 0x003f79a8 74727565 2c20696e 74333220 636f7665 true, int32 cove\n+ 0x003f79b8 72616765 6d756c74 69706c69 65722900 ragemultiplier).\n+ 0x003f79c8 4572726f 723a0a00 66726f6d 3a200000 Error:..from: ..\n+ 0x003f79d8 6c656e3a 20000000 73697a65 206f6620 len: ...size of \n+ 0x003f79e8 636f6e74 69673a20 00000000 66726f6d contig: ....from\n+ 0x003f79f8 202b206c 656e203e 2073697a 65206f66 + len > size of\n+ 0x003f7a08 20636f6e 7469673f 00000000 4f6f6f6f contig?....Oooo\n+ 0x003f7a18 70732c20 626f756e 64636865 636b2066 ps, boundcheck f\n+ 0x003f7a28 61696c65 643a2000 5748593f 20496c6c ailed: .WHY? Ill\n+ 0x003f7a38 6567616c 20636861 723a2000 203e3e00 egal char: . >>.\n+ 0x003f7a48 3c3c0a00 556e6578 70656374 65642062 <<..Unexpected b\n+ 0x003f7a58 6173652e 00000000 636f6e74 6967706f ase.....contigpo\n+ 0x003f7a68 73697469 6f6e3c30 203f0000 766f6964 sition<0 ?..void\n+ 0x003f7a78 20436f6e 7469673a 3a61646a 75737452 Contig::adjustR\n+ 0x003f7a88 6561644f 66667365 74732869 6e743332 eadOffsets(int32\n+ 0x003f7a98 20636f6e 74696770 6f736974 696f6e2c contigposition,\n+ 0x003f7aa8 20696e74 3332206f 66667365 74290000 int32 offset)..\n+ 0x003f7ab8 52656164 706f6f6c 2069643a 20000000 Readpool id: ...\n+ 0x003f7ac8 4572726f 72207768 696c6520 75706461 Error while upda\n+ 0x003f7ad8 74696e67 20746869 73207265 61642028 ting this read (\n+ 0x003f7ae8 33293a0a 00000000 496e2074 68697320 3):.....In this \n+ 0x003f7af8 636f6e74 69672028 6f757470 7574206d contig (output m\n+ 0x003f7b08 69676874 20637261 7368293a 00000000 ight crash):....\n+ 0x003f7b18 766f6964 20436f6e 7469673a 3a737472 void Contig::str\n+ 0x003f7b28 6970546f 4261636b 626f6e65 28290000 ipToBackbone()..\n+ 0x003f7b38 5f636572 5f737861 5f000000 57686f6f _cer_sxa_...Whoo\n+ 0x003f7b48 6f707320 312c2071 75616c20 00000000 ops 1, qual ....\n+ 0x003f7b58 20697320 3e3d2031 30302e20 506f7369 is >= 100. Posi\n+ 0x003f7b68 74696f6e 20000000 766f6964 20436f6e tion ...void Con\n+ 0x003f7b78 7469673a 3a747261 6e73666f 726d4345 tig::transformCE\n+ 0x003f7b88 524d6170 70696e67 73546f43 6f766572 RMappingsToCover\n+ 0x003f7b98 61676552 65616473 28290000 57686f6f ageReads()..Whoo\n+ 0x003f7ba8 6f707320 322c2071 75616c20 00000000 ops 2, qual ....\n+ 0x003f7bb8 4572726f 723a2064 6964206e 6f742066 Error: did not f\n+ 0x003f7bc8 696e6420 73747261 696e2022 00000000 ind strain \"....\n+ 0x003f7bd8 2220696e 20726561 64706f6f 6c2e0000 \" in readpool...\n+ 0x003f7be8 48617665 20626565 6e206173 6b656420 Have been asked \n+ 0x003f7bf8 746f2075 7365206e 6f6e2d65 78697374 to use non-exist\n+ 0x003f7c08 696e6720 73747261 696e2066 6f722062 ing strain for b\n+ 0x003f7c18 75696c64 696e6720 7261696c 732e0000 uilding rails...\n+ 0x003f7c28 766f6964 20436f6e 7469673a 3a616464 void Contig::add\n+ 0x003f7c38 5261696c 73282900 62625f00 72725f23 Rails().bb_.rr_#\n+ 0x003f7c48 23232300 23232323 00000000 20666972 ###.####.... fir\n+ 0x003f7c58 73742072 61696c3a 20000000 206c6173 st rail: ... las\n+ 0x003f7c68 74207261 696c3a20 00000000 0a4f7563 t rail: .....Ouc\n+ 0x003f7c78 68202e2e 2e206572 726f7220 7768696c h ... error whil\n+ 0x003f7c88 65206164 64696e67 20737562 73657175 e adding subsequ\n+ 0x003f7c98 656e6365 2e0a0000 63732e73 697a653a ence....cs.size:\n+ 0x003f7ca8 20000000 7472616e 73693a20 00000000 ...transi: ....\n+ 0x003f7cb8 6163746f 66667365 743a2000 72656164 actoffset: .read\n+ 0x003f7cc8 6e616d65 3a200000 7365713a 20000000 name: ..seq: ...\n+ 0x003f7cd8 41646469 6e672072 61696c73 3a206c65 Adding rails: le\n+ 0x003f7ce8 6e677468 20000000 20616e64 206f7665 ngth ... and ove\n+ 0x003f7cf8 726c6170 20000000 436f6e74 69672000 rlap ...Contig .\n+ 0x003f7d08 20686173 206e6f20 73747261 696e6e61 has no strainna\n+ 0x003f7d18 6d657320 67697665 6e206974 20697473 mes given it its\n+ 0x003f7d28 20646174 612e204e 6f742067 6f6f642c data. Not good,\n+ 0x003f7d38 206d616b 65207375 7265206f 6e652069 make sure one i\n+ 0x003f7d48 73207072 6573656e 74202874 72792070 s present (try p\n+ 0x003f7d58 75747469 6e672027 73747261 696e6e61 utting 'strainna\n+ 0x003f7d68 6d653d27 20696e20 6d616e69 66657374 me=' in manifest\n+ 0x003f7d78 2066696c 65292e00 766f6964 20436f6e file)..void Con\n+ 0x003f7d88 7469673a 3a736574 75704173 4261636b tig::setupAsBack\n+ 0x003f7d98 426f6e65 436f6e74 69672829 00000000 BoneContig()....\n+ 0x003f7da8 20686173 20737472 61696e20 00000000 has strain ....\n+ 0x003f7db8 536f6d65 7468696e 67206973 2077726f Something is wro\n+ 0x003f7dc8 6e672077 69746820 636f6666 7365743a ng with coffset:\n+ 0x003f7dd8 20000000 766f6964 20436f6e 7469673a ...void Contig:\n+ 0x003f7de8 3a696e73 65727452 65616449 6e436f6e :insertReadInCon\n+ 0x003f7df8 74696728 416c6967 6e656444 75616c53 tig(AlignedDualS\n+ 0x003f7e08 65712026 20616473 2c207569 6e743332 eq & ads, uint32\n+ 0x003f7e18 20636f66 66736574 2c20696e 74333220 coffset, int32 \n+ 0x003f7e28 64697265 6374696f 6e5f6672 6e69642c direction_frnid,\n+ 0x003f7e38 20696e74 33322064 69726563 74696f6e int32 direction\n+ 0x003f7e48 5f726566 69642c20 696e7433 3220636f _refid, int32 co\n+ 0x003f7e58 76657261 67656d75 6c746970 6c696572 veragemultiplier\n+ 0x003f7e68 29000000 536f6d65 7468696e 67206973 )...Something is\n+ 0x003f7e78 2077726f 6e672077 69746820 74686174 wrong with that\n+ 0x003f7e88 20414453 210a0000 6f666673 65746e65 ADS!...offsetne\n+ 0x003f7e98 77726561 643e434f 4e5f636f 756e7473 wread>CON_counts\n+ 0x003f7ea8 2e73697a 65282920 3f3f3f00 696e6465 .size() ???.inde\n+ 0x003f7eb8 78696e72 65616420 3c203020 3f000000 xinread < 0 ?...\n+ 0x003f7ec8 696e6465 78696e63 6f6e7469 67203c20 indexincontig < \n+ 0x003f7ed8 30203f00 426f7468 20737472 616e6473 0 ?.Both strands\n+ 0x003f7ee8 20696e20 61647320 68617665 20612027 in ads have a '\n+ 0x003f7ef8 2a27203f 00000000 696e6465 78696e63 *' ?....indexinc\n+ 0x003f7f08 6f6e7469 67202800 29203e20 434f4e5f ontig (.) > CON_\n+ 0x003f7f18 636f756e 74732e73 697a6528 29202800 counts.size() (.\n+ 0x003f7f28 75736564 20616464 46697273 74526561 used addFirstRea\n+ 0x003f7f38 64207768 696c6520 74686572 65206172 d while there ar\n+ 0x003f7f48 6520616c 72656164 79207265 61647320 e already reads \n+ 0x003f7f58 696e2063 6f6e7469 672e0000 766f6964 in contig...void\n+ 0x003f7f68 20436f6e 7469673a 3a616464 46697273 Contig::addFirs\n+ 0x003f7f78 74526561 64287569 6e743332 2069642c tRead(uint32 id,\n+ 0x003f7f88 20696e74 38206469 72656374 696f6e29 int8 direction)\n+ 0x003f7f98 00000000 756e7465 73746564 20646972 ....untested dir\n+ 0x003f7fa8 65637469 6f6e203c 20300000 66726f6e ection < 0..fron\n+ 0x003f7fb8 7464656c 6574696f 6e73203c 2030203f tdeletions < 0 ?\n+ 0x003f7fc8 00000000 766f6964 20436f6e 7469673a ....void Contig:\n+ 0x003f7fd8 3a64656c 65746552 65616428 75696e74 :deleteRead(uint\n+ 0x003f7fe8 33322069 64290000 656e643a 206d6178 32 id)..end: max\n+ 0x003f7ff8 63686563 6b6c656e 3c203020 3f000000 checklen< 0 ?...\n+ 0x003f8008 656e6464 656c6574 696f6e73 203c2030 enddeletions < 0\n+ 0x003f8018 203f0000 54656d70 6c617465 206e6f74 ?..Template not\n+ 0x003f8028 20707265 73656e74 20696e20 6c697374 present in list\n+ 0x003f8038 2074686f 75676820 72656164 20686173 though read has\n+ 0x003f8048 206f6e65 3f000000 47616161 61616168 one?...Gaaaaaah\n+ 0x003f8058 21205472 79696e67 20746f20 61646420 ! Trying to add \n+ 0x003f8068 61207265 6164206f 66206c65 6e677468 a read of length\n+ 0x003f8078 20303f3f 3f0a0000 47616161 61616168 0???...Gaaaaaah\n+ 0x003f8088 21205472 79696e67 20746f20 61646420 ! Trying to add \n+ 0x003f8098 61207265 6164206f 66206c65 6e677468 a read of length\n+ 0x003f80a8 20303f3f 3f000000 766f6964 20436f6e 0???...void Con\n+ 0x003f80b8 7469673a 3a616464 52656164 5f777261 tig::addRead_wra\n+ 0x003f80c8 70706564 28737464 3a3a7665 63746f72 pped(std::vector\n+ 0x003f80d8 3c416c69 676e3e20 2620616c 69676e63 & alignc\n+ 0x003f80e8 61636865 2c20636f 6e737420 416c6967 ache, const Alig\n+ 0x003f80f8 6e656444 75616c53 65714661 63747320 nedDualSeqFacts \n+ 0x003f8108 2a20696e 69746961 6c616473 662c2069 * initialadsf, i\n+ 0x003f8118 6e743332 20726566 69642c20 696e7433 nt32 refid, int3\n+ 0x003f8128 32206e65 7769642c 20696e74 33322064 2 newid, int32 d\n+ 0x003f8138 69726563 74696f6e 5f66726e 69642c20 irection_frnid, \n+ 0x003f8148 626f6f6c 206e6577 69645f69 736d756c bool newid_ismul\n+ 0x003f8158 7469636f 70792c20 696e7433 3220666f ticopy, int32 fo\n+ 0x003f8168 72636567 726f772c 20657272 6f727374 rcegrow, errorst\n+ 0x003f8178 61747573 5f742026 20657272 73746174 atus_t & errstat\n+ 0x003f8188 29000000 54797065 20414249 20534f4c )...Type ABI SOL\n+ 0x003f8198 6944206e 65656473 206d6f72 65207375 iD needs more su\n+ 0x003f81a8 70706f72 7420342e 00000000 0a536571 pport 4......Seq\n+ 0x003f81b8 74797065 3a200000 54727969 6e672074 type: ..Trying t\n+ 0x003f81c8 6f206164 6420756e 6b6e6f77 6e207365 o add unknown se\n+ 0x003f81d8 71747970 653f204e 65656473 206d6f72 qtype? Needs mor\n+ 0x003f81e8 6520636f 64652034 2e000000 61667465 e code 4....afte\n+ 0x003f81f8 72206164 64466972 73745265 61643a20 r addFirstRead: \n+ 0x003f8208 434f4e5f 72656164 73706572 73747261 CON_readsperstra\n+ 0x003f8218 696e2e73 697a6528 29200000 203c2052 in.size() .. < R\n+ 0x003f8228 65616447 726f7570 4c69623a 3a676574 eadGroupLib::get\n+ 0x003f8238 4e756d4f 66537472 61696e73 28282920 NumOfStrains(() \n+ 0x003f8248 00000000 54726965 6420746f 20616464 ....Tried to add\n+ 0x003f8258 20612072 61696c3f 3f3f0000 72656669 a rail???..refi\n+ 0x003f8268 64206e6f 7420696e 20696e69 7469616c d not in initial\n+ 0x003f8278 61647366 3f3f3f0a 00000000 6e657769 adsf???.....newi\n+ 0x003f8288 64206e6f 7420696e 20696e69 7469616c d not in initial\n+ 0x003f8298 61647366 3f3f3f0a 00000000 496d706f adsf???.....Impo\n+ 0x003f82a8 73736962 6c652065 72726f72 20776869 ssible error whi\n+ 0x003f82b8 6c652061 6464696e 67207265 61642c20 le adding read, \n+ 0x003f82c8 696e7665 73746967 61746521 20546869 investigate! Thi\n+ 0x003f82d8 73206d61 79206265 20647565 20666175 s may be due fau\n+ 0x003f82e8 6c747920 52414d2e 00000000 54797065 lty RAM.....Type\n+ 0x003f82f8 20414249 20534f4c 6944206e 65656473 ABI SOLiD needs\n+ 0x003f8308 206d6f72 65207375 70706f72 74203461 more support 4a\n+ 0x003f8318 2e000000 48617669 6e672075 6e6b6e6f ....Having unkno\n+ 0x003f8328 776e2073 65717479 70652061 73207265 wn seqtype as re\n+ 0x003f8338 66657265 6e63653f 204e6565 6473206d ference? Needs m\n+ 0x003f8348 6f726520 636f6465 2034612e 00000000 ore code 4a.....\n+ 0x003f8358 52656649 44200000 29206e6f 7420666f RefID ..) not fo\n+ 0x003f8368 756e6420 6f6e2063 6f6e7469 673f0000 und on contig?..\n+ 0x003f8378 66696e61 6c3a2078 63757420 00000000 final: xcut ....\n+ 0x003f8388 203e2079 63757420 00000000 53686565 > ycut ....Shee\n+ 0x003f8398 6573682c 206c656e 67746820 6f662074 esh, length of t\n+ 0x003f83a8 656d706f 72617279 20636f6e 73656e73 emporary consens\n+ 0x003f83b8 75732069 7320303f 20457272 6f722c20 us is 0? Error, \n+ 0x003f83c8 62757420 636f6e74 696e7569 6e672061 but continuing a\n+ 0x003f83d8 73207468 69732070 726f6261 626c7920 s this probably \n+ 0x003f83e8 77696c6c 206e6f74 20616666 65637420 will not affect \n+ 0x003f83f8 636f6e74 69672d62 75696c64 696e6720 contig-building \n+ 0x003f8408 616e7977 61792e00 0a786375 743a2000 anyway...xcut: .\n+ 0x003f8418 0a796375 743a2000 0a656f66 66736574 .ycut: ..eoffset\n+ 0x003f8428 3a200000 4f756368 202e2e2e 20657272 : ..Ouch ... err\n+ 0x003f8438 6f722069 6e20616c 69676e6d 656e7420 or in alignment \n+ 0x003f8448 64657465 63746564 2e0a0000 78637574 detected....xcut\n+ 0x003f8458 3a200000 79637574 3a200000 656f6666 : ..ycut: ..eoff\n+ 0x003f8468 7365743a 20000000 6469725f 66726e69 set: ...dir_frni\n+ 0x003f8478 643a2000 09646972 5f726566 69643a20 d: ..dir_refid: \n+ 0x003f8488 00000000 4f666673 65742052 65666964 ....Offset Refid\n+ 0x003f8498 3a000000 5568206f 68202e2e 2e206e6f :...Uh oh ... no\n+ 0x003f84a8 7420676f 6f640a00 666f7263 656d6572 t good..forcemer\n+ 0x003f84b8 67652000 434f4e5f 6d657267 656e6577 ge .CON_mergenew\n+ 0x003f84c8 73727265 61647320 00000000 6d61796d srreads ....maym\n+ 0x003f84d8 61707468 69737265 61642000 6e657772 apthisread .newr\n+ 0x003f84e8 65616473 65717479 70652000 72745f70 eadseqtype .rt_p\n+ 0x003f84f8 6172616d 732e6765 74436f6e 74696750 arams.getContigP\n+ 0x003f8508 6172616d 7328292e 636f6e5f 6d657267 arams().con_merg\n+ 0x003f8518 6573686f 72747265 61647320 00000000 eshortreads ....\n+ 0x003f8528 61647349 2d3e6765 7453636f 72655261 adsI->getScoreRa\n+ 0x003f8538 74696f28 29200000 63616e6d 61702000 tio() ..canmap .\n+ 0x003f8548 61646452 65616465 72726f72 5f524550 addReaderror_REP\n+ 0x003f8558 4c41595f 646f5f6e 6f745f64 656c6574 LAY_do_not_delet\n+ 0x003f8568 652e6c6f 67000000 0a0a0a41 2066696c e.log......A fil\n+ 0x003f8578 65206e61 6d656420 27616464 52656164 e named 'addRead\n+ 0x003f8588 6572726f 725f5245 504c4159 5f646f5f error_REPLAY_do_\n+ 0x003f8598 6e6f745f 64656c65 74652e6c 6f672720 not_delete.log' \n+ 0x003f85a8 68617320 6265656e 20777269 7474656e has been written\n+ 0x003f85b8 0a746f20 74686520 776f726b 696e6720 .to the working \n+ 0x003f85c8 64697265 63746f72 792e2050 6c656173 directory. Pleas\n+ 0x003f85d8 65207365 6e642069 7420746f 20746865 e send it to the\n+ 0x003f85e8 20617574 686f7220 746f2067 65742074 author to get t\n+ 0x003f85f8 68617420 62756720 66697865 64210a0a hat bug fixed!..\n+ 0x003f8608 0a000000 766f6964 20436f6e 7469673a ....void Contig:\n+ 0x003f8618 3a616464 52656164 28737464 3a3a7665 :addRead(std::ve\n+ 0x003f8628 63746f72 3c416c69 676e3e20 2620616c ctor & al\n+ 0x003f8638 69676e63 61636865 2c20636f 6e737420 igncache, const \n+ 0x003f8648 416c6967 6e656444 75616c53 65714661 AlignedDualSeqFa\n+ 0x003f8658 63747320 2a20696e 69746961 6c616473 cts * initialads\n+ 0x003f8668 662c2069 6e743332 20726566 69642c20 f, int32 refid, \n+ 0x003f8678 696e7433 32206e65 7769642c 20696e74 int32 newid, int\n+ 0x003f8688 33322064 69726563 74696f6e 5f66726e 32 direction_frn\n+ 0x003f8698 69642c20 626f6f6c 206e6577 69645f69 id, bool newid_i\n+ 0x003f86a8 736d756c 7469636f 70792c20 696e7433 smulticopy, int3\n+ 0x003f86b8 3220666f 72636567 726f772c 2074656d 2 forcegrow, tem\n+ 0x003f86c8 706c6174 65677565 73735f74 20262074 plateguess_t & t\n+ 0x003f86d8 656d706c 61746567 75657373 2c206572 emplateguess, er\n+ 0x003f86e8 726f7273 74617475 735f7420 26206572 rorstatus_t & er\n+ 0x003f86f8 72737461 74290000 0a574152 4e494e47 rstat)...WARNING\n+ 0x003f8708 2f455252 4f523a20 69676e6f 72656420 /ERROR: ignored \n+ 0x003f8718 61206d69 7373696e 67207265 66696400 a missing refid.\n+ 0x003f8728 66697273 746b6e6f 776e6262 706f7320 firstknownbbpos \n+ 0x003f8738 00000000 203c3020 3f3f3f00 766f6964 .... <0 ???.void\n+ 0x003f8748 20436f6e 7469673a 3a747269 6d4d6170 Contig::trimMap\n+ 0x003f8758 4f766572 68616e67 28290000 6c617374 Overhang()..last\n+ 0x003f8768 6b6e6f77 6e626270 6f732000 414c5553 knownbbpos .ALUS\n+ 0x003f8778 00000000 52455054 00000000 53524d72 ....REPT....SRMr\n+ 0x003f8788 00000000 43524d72 00000000 57524d72 ....CRMr....WRMr\n+ 0x003f8798 00000000 53494f72 00000000 636f6e74 ....SIOr....cont\n+ 0x003f87a8 6967706f 73746f20 3c20636f 6e746967 igposto < contig\n+ 0x003f87b8 706f7366 726f6d20 6e6f7420 616c6c6f posfrom not allo\n+ 0x003f87c8 77656400 766f6964 20436f6e 7469673a wed.void Contig:\n+ 0x003f87d8 3a616464 54616754 6f436f6e 73656e73 :addTagToConsens\n+ 0x003f87e8 75732869 6e743332 20636f6e 74696770 us(int32 contigp\n+ 0x003f87f8 6f736672 6f6d2c20 696e7433 3220636f osfrom, int32 co\n+ 0x003f8808 6e746967 706f7374 6f2c2063 6f6e7374 ntigposto, const\n+ 0x003f8818 20636861 72202a20 6964656e 74696669 char * identifi\n+ 0x003f8828 65722c20 636f6e73 74206368 6172202a er, const char *\n+ 0x003f8838 20636f6d 6d656e74 29000000 636f6e74 comment)...cont\n+ 0x003f8848 6967706f 7366726f 6d203e20 73697a65 igposfrom > size\n+ 0x003f8858 206f6620 636f6e74 69670000 636f6e74 of contig..cont\n+ 0x003f8868 6967706f 73746f20 3e207369 7a65206f igposto > size o\n+ 0x003f8878 6620636f 6e746967 00000000 73747261 f contig....stra\n+ 0x003f8888 6e642069 73206e6f 74202b2c 202d206f nd is not +, - o\n+ 0x003f8898 72203d00 54727969 6e672074 6f207365 r =.Trying to se\n+ 0x003f88a8 7420696c 6c656761 6c207374 72616e64 t illegal strand\n+ 0x003f88b8 20636861 72616374 65722000 434f4e5f character .CON_\n+ 0x003f88c8 72656164 706f6f6c 2d3e6765 744e756d readpool->getNum\n+ 0x003f88d8 4f665374 7261696e 496e5265 6164706f OfStrainInReadpo\n+ 0x003f88e8 6f6c2829 3d3d3020 3f3f3f00 766f6964 ol()==0 ???.void\n+ 0x003f88f8 20436f6e 7469673a 3a696e69 7469616c Contig::initial\n+ 0x003f8908 69736543 6f6e7469 6728636f 6e737420 iseContig(const \n+ 0x003f8918 7374643a 3a6c6973 743c636f 6e746967 std::list & \n+ 0x003f8938 726c6973 742c2073 74643a3a 76656374 rlist, std::vect\n+ 0x003f8948 6f723c6d 756c7469 7461675f 743e2026 or &\n+ 0x003f8958 20746167 732c2063 6f6e7374 20737464 tags, const std\n+ 0x003f8968 3a3a7374 72696e67 20262063 6f6e7469 ::string & conti\n+ 0x003f8978 676e616d 652c2073 74643a3a 73747269 gname, std::stri\n+ 0x003f8988 6e672026 20666978 65647365 712c2073 ng & fixedseq, s\n+ 0x003f8998 74643a3a 76656374 6f723c62 6173655f td::vector & fix\n+ 0x003f89b8 65647175 616c2900 436f6e74 69672068 edqual).Contig h\n+ 0x003f89c8 61732073 697a6520 00000000 20776869 as size .... whi\n+ 0x003f89d8 63682069 73203c3d 2030203f 3f3f0000 ch is <= 0 ???..\n+ 0x003f89e8 63634920 3d3d2043 4f4e5f63 6f756e74 ccI == CON_count\n+ 0x003f89f8 732e656e 64282920 3f3f3f00 2a636f6e s.end() ???.*con\n+ 0x003f8a08 7362203d 3d203020 3f000000 0a4d696e sb == 0 ?....Min\n+ 0x003f8a18 6f722070 726f626c 656d2077 69746820 or problem with \n+ 0x003f8a28 636f6e74 69672000 2c206669 78696e67 contig ., fixing\n+ 0x003f8a38 2e0a0000 4572726f 72207768 696c6520 ....Error while \n+ 0x003f8a48 61646469 6e672074 68697320 72656164 adding this read\n+ 0x003f8a58 20283129 3a0a0000 41667465 72207472 (1):...After tr\n+ 0x003f8a68 696d6d69 6e672c20 636f6e74 69672068 imming, contig h\n+ 0x003f8a78 6173207a 65726f20 6c656e67 74683f00 as zero length?.\n+ 0x003f8a88 696e6c69 6e652054 54202620 48446571 inline TT & HDeq\n+ 0x003f8a98 75653a3a 68646974 65723a3a 64657265 ue::hditer::dere\n+ 0x003f8aa8 66657265 6e636528 2920636f 6e737400 ference() const.\n+ 0x003f8ab8 69746572 61746f72 20707269 765f6572 iterator priv_er\n+ 0x003f8ac8 61736528 69746572 61746f72 2066726f ase(iterator fro\n+ 0x003f8ad8 6d2c2069 74657261 746f7220 746f2900 m, iterator to).\n+ 0x003f8ae8 48446571 75653a3a 696e7365 72742869 HDeque::insert(i\n+ 0x003f8af8 74657261 746f7220 77686572 652c2073 terator where, s\n+ 0x003f8b08 697a655f 74206e75 6d2c2063 6f6e7374 ize_t num, const\n+ 0x003f8b18 20545420 26207829 00000000 766f6964 TT & x)....void\n+ 0x003f8b28 20736574 53747261 6e642863 68617220 setStrand(char \n+ 0x003f8b38 73290000 7063723a 20000000 09727062 s)..pcr: ....rpb\n+ 0x003f8b48 493a2000 0972616f 69200000 54686973 I: ..raoi ..This\n+ 0x003f8b58 20697320 656e6428 29000000 54727969 is end()...Tryi\n+ 0x003f8b68 6e672074 6f206465 72656665 72656e63 ng to dereferenc\n+ 0x003f8b78 6520616e 20686469 74657220 706f696e e an hditer poin\n+ 0x003f8b88 74696e67 20746f20 656e6428 293f3f3f ting to end()???\n+ 0x003f8b98 00000000 64657175 653a3a5f 4d5f6e65 ....deque::_M_ne\n+ 0x003f8ba8 775f656c 656d656e 74735f61 745f6672 w_elements_at_fr\n+ 0x003f8bb8 6f6e7400 6373697a 65200000 20213d20 ont.csize .. != \n+ 0x003f8bc8 48445f73 697a6520 00000000 63616c6c HD_size ....call\n+ 0x003f8bd8 65642077 69746820 616e2069 74657261 ed with an itera\n+ 0x003f8be8 746f7220 6e6f7420 62656c6f 6e67696e tor not belongin\n+ 0x003f8bf8 6720746f 20746869 7320636f 6e746169 g to this contai\n+ 0x003f8c08 6e65723f 00000000 77686572 65206361 ner?....where ca\n+ 0x003f8c18 6c6c6564 20776974 6820616e 20697465 lled with an ite\n+ 0x003f8c28 7261746f 72206e6f 74206265 6c6f6e67 rator not belong\n+ 0x003f8c38 696e6720 746f2074 68697320 636f6e74 ing to this cont\n+ 0x003f8c48 61696e65 723f0000 746f2063 616c6c65 ainer?..to calle\n+ 0x003f8c58 64207769 74682061 6e206974 65726174 d with an iterat\n+ 0x003f8c68 6f72206e 6f742062 656c6f6e 67696e67 or not belonging\n+ 0x003f8c78 20746f20 74686973 20636f6e 7461696e to this contain\n+ 0x003f8c88 65723f00 64696666 3e48445f 73697a65 er?.diff>HD_size\n 0x003f8c98 00000000 00000000 00000000 00000000 ................\n 0x003f8ca8 00000000 00000000 00000000 00000000 ................\n 0x003f8cb8 00000000 00000000 00000000 00000000 ................\n 0x003f8cc8 00000000 00000000 00000000 00000000 ................\n 0x003f8cd8 00000000 00000000 00000000 00000000 ................\n- 0x003f8ce8 40400000 3d2b2d00 00000000 00000000 @@..=+-.........\n+ 0x003f8ce8 00000000 00000000 40400000 3d2b2d00 ........@@..=+-.\n 0x003f8cf8 00000000 00000000 00000000 00000000 ................\n 0x003f8d08 00000000 00000000 00000000 00000000 ................\n 0x003f8d18 00000000 00000000 00000000 00000000 ................\n 0x003f8d28 00000000 00000000 00000000 00000000 ................\n 0x003f8d38 00000000 00000000 00000000 00000000 ................\n- 0x003f8d48 57726f6e 67207479 70652000 20697320 Wrong type . is \n- 0x003f8d58 6e6f7420 6b6e6f77 6e2e0000 766f6964 not known...void\n- 0x003f8d68 20526561 643a3a73 6574436f 75745479 Read::setCoutTy\n- 0x003f8d78 70652875 696e7438 20747970 65290000 pe(uint8 type)..\n- 0x003f8d88 3a20756e 64656669 6e656420 74656368 : undefined tech\n- 0x003f8d98 6e6f6c6f 67792000 636f6e73 74206368 nology .const ch\n- 0x003f8da8 6172202a 20526561 643a3a73 616e6974 ar * Read::sanit\n- 0x003f8db8 79436865 636b2829 20636f6e 73740000 yCheck() const..\n- 0x003f8dc8 3a207265 61642068 6173206e 6f207661 : read has no va\n- 0x003f8dd8 6c696420 64617461 3f000000 5245415f lid data?...REA_\n- 0x003f8de8 70735f64 69727479 20616e64 20524541 ps_dirty and REA\n- 0x003f8df8 5f706373 5f646972 74792062 6f746820 _pcs_dirty both \n- 0x003f8e08 74727565 3f000000 53697a65 73206f66 true?...Sizes of\n- 0x003f8e18 20666f72 77617264 20000000 20616e64 forward ... and\n- 0x003f8e28 20636f6d 706c656d 656e7420 70616464 complement padd\n- 0x003f8e38 65642000 20646966 6665722e 00000000 ed . differ.....\n- 0x003f8e48 3a205245 415f716c 20000000 203c3020 : REA_ql ... <0 \n- 0x003f8e58 3f000000 3a205245 415f636c 20000000 ?...: REA_cl ...\n- 0x003f8e68 3a205245 415f736c 20000000 3a205245 : REA_sl ...: RE\n- 0x003f8e78 415f6d6c 20000000 3a205245 415f6372 A_ml ...: REA_cr\n- 0x003f8e88 20000000 203e2061 63746c65 6e2b3120 ... > actlen+1 \n- 0x003f8e98 00000000 3a205245 415f7172 20000000 ....: REA_qr ...\n- 0x003f8ea8 3a205245 415f7372 20000000 3a205245 : REA_sr ...: RE\n- 0x003f8eb8 415f6d72 20000000 3a205245 415f6164 A_mr ...: REA_ad\n- 0x003f8ec8 6a757374 6d656e74 73200000 20213d20 justments .. != \n- 0x003f8ed8 65787065 63746564 2073697a 65200000 expected size ..\n- 0x003f8ee8 3a205245 415f7175 616c6974 69657320 : REA_qualities \n- 0x003f8ef8 00000000 3a205245 415f6270 6f736861 ....: REA_bposha\n- 0x003f8f08 73687374 61747320 00000000 20213d20 shstats .... != \n- 0x003f8f18 00000000 20657870 65637465 64207369 .... expected si\n- 0x003f8f28 7a652000 3a205245 415f726c 65767074 ze .: REA_rlevpt\n- 0x003f8f38 722d3e73 697a6528 29200000 20213d20 r->size() .. != \n- 0x003f8f48 6163746c 656e2000 3a207461 676e756d actlen .: tagnum\n- 0x003f8f58 62657220 28000000 29203e3d 20524541 ber (...) >= REA\n- 0x003f8f68 5f746167 732e7369 7a652028 00000000 _tags.size (....\n- 0x003f8f78 636f6e73 74206d75 6c746974 61675f74 const multitag_t\n- 0x003f8f88 20262052 6561643a 3a676574 54616728 & Read::getTag(\n- 0x003f8f98 75696e74 33322074 61676e75 6d626572 uint32 tagnumber\n- 0x003f8fa8 2920636f 6e737400 3a206861 76652071 ) const.: have q\n- 0x003f8fb8 75616c69 7479203c 30206f72 203e2031 uality <0 or > 1\n- 0x003f8fc8 30303f3f 3f0a0000 766f6964 20526561 00???...void Rea\n- 0x003f8fd8 643a3a63 6865636b 5175616c 69746965 d::checkQualitie\n- 0x003f8fe8 73282900 3a207472 69656420 746f2073 s().: tried to s\n- 0x003f8ff8 65742000 20717561 6c697469 65732061 et . qualities a\n- 0x003f9008 6c74686f 75676820 74686520 72656164 lthough the read\n- 0x003f9018 20686173 20000000 20626173 65732e0a has ... bases..\n- 0x003f9028 00000000 766f6964 20526561 643a3a73 ....void Read::s\n- 0x003f9038 65745175 616c6974 79287374 643a3a76 etQuality(std::v\n- 0x003f9048 6563746f 723c6261 73655f71 75616c69 ector & quals)..\n- 0x003f9068 3a20706f 73280000 29203e20 72656164 : pos(..) > read\n- 0x003f9078 2073697a 65200000 52656164 3a3a6861 size ..Read::ha\n- 0x003f9088 73546167 28636f6e 7374206d 756c7469 sTag(const multi\n- 0x003f9098 7461675f 743a3a6d 74655f69 645f7420 tag_t::mte_id_t \n- 0x003f90a8 6964656e 74696669 65722c20 696e7433 identifier, int3\n- 0x003f90b8 3220706f 73292063 6f6e7374 00000000 2 pos) const....\n- 0x003f90c8 75696e74 33322052 6561643a 3a636f75 uint32 Read::cou\n- 0x003f90d8 6e745461 67732863 6f6e7374 206d756c ntTags(const mul\n- 0x003f90e8 74697461 675f743a 3a6d7465 5f69645f titag_t::mte_id_\n- 0x003f90f8 74206964 656e7469 66696572 2c20696e t identifier, in\n- 0x003f9108 74333220 706f7329 20636f6e 73740000 t32 pos) const..\n- 0x003f9118 3a20706f 73202800 29203e3d 20524541 : pos (.) >= REA\n- 0x003f9128 5f717561 6c697469 65732e73 697a6520 _qualities.size \n- 0x003f9138 28000000 63686172 20526561 643a3a67 (...char Read::g\n- 0x003f9148 65745175 616c6974 79496e53 65717565 etQualityInSeque\n- 0x003f9158 6e636528 696e7433 3220706f 73290000 nce(int32 pos)..\n- 0x003f9168 63686172 20526561 643a3a67 65745175 char Read::getQu\n- 0x003f9178 616c6974 79496e43 6f6d706c 656d656e alityInComplemen\n- 0x003f9188 74536571 75656e63 6528696e 74333220 tSequence(int32 \n- 0x003f9198 706f7329 00000000 29203e3d 20524541 pos)....) >= REA\n- 0x003f91a8 5f62706f 73686173 68737461 74732e73 _bposhashstats.s\n- 0x003f91b8 697a6520 28000000 62617365 666c6167 ize (...baseflag\n- 0x003f91c8 735f7420 52656164 3a3a6765 74426173 s_t Read::getBas\n- 0x003f91d8 65466c61 67732875 696e7433 3220706f eFlags(uint32 po\n- 0x003f91e8 73292063 6f6e7374 00000000 72656e61 s) const....rena\n- 0x003f91f8 6d656c69 73742025 20322021 3d20303f melist % 2 != 0?\n- 0x003f9208 3f3f0000 626f6f6c 20526561 643a3a72 ??..bool Read::r\n- 0x003f9218 656e616d 65526561 64507265 66697828 enameReadPrefix(\n- 0x003f9228 7374643a 3a737472 696e6720 26206163 std::string & ac\n- 0x003f9238 746e616d 65290000 62617369 635f7374 tname)..basic_st\n- 0x003f9248 72696e67 3a3a7375 62737472 00000000 ring::substr....\n- 0x003f9258 25733a20 5f5f706f 73202877 68696368 %s: __pos (which\n- 0x003f9268 20697320 257a7529 203e2074 6869732d is %zu) > this-\n- 0x003f9278 3e73697a 65282920 28776869 63682069 >size() (which i\n- 0x003f9288 7320257a 75290000 62617369 635f7374 s %zu)..basic_st\n- 0x003f9298 72696e67 3a3a6261 7369635f 73747269 ring::basic_stri\n- 0x003f92a8 6e670000 54460000 54520000 3a207465 ng..TF..TR..: te\n- 0x003f92b8 6d706c61 74652061 6c726561 64792073 mplate already s\n- 0x003f92c8 65742074 6f200000 7374643a 3a737472 et to ..std::str\n- 0x003f92d8 696e6720 52656164 3a3a6361 6c635465 ing Read::calcTe\n- 0x003f92e8 6d706c61 7465496e 666f2829 00000000 mplateInfo()....\n- 0x003f92f8 3a207465 6d706c61 74652073 65676d65 : template segme\n- 0x003f9308 6e742061 6c726561 64792073 65742074 nt already set t\n- 0x003f9318 6f200000 3a20756e 6b6e6f77 6e207265 o ..: unknown re\n- 0x003f9328 6164206e 616d696e 67207363 68656d65 ad naming scheme\n- 0x003f9338 20000000 20736574 3f3f3f20 52656164 ... set??? Read\n- 0x003f9348 47726f75 704c6962 3a3a5343 48454d45 GroupLib::SCHEME\n- 0x003f9358 5f4e4f4e 45200000 2e736366 00000000 _NONE ...scf....\n- 0x003f9368 3a20466f 756e6420 64696769 6e6f726d : Found diginorm\n- 0x003f9378 206d756c 7469706c 69657220 6f662030 multiplier of 0\n- 0x003f9388 3f000000 696e7433 32205265 61643a3a ?...int32 Read::\n- 0x003f9398 67657444 6967694e 6f726d4d 756c7469 getDigiNormMulti\n- 0x003f93a8 706c6965 72282920 636f6e73 74000000 plier() const...\n- 0x003f93b8 41726768 2120466f 756e6420 696c6c65 Argh! Found ille\n- 0x003f93c8 67616c20 62617365 20000000 20616e64 gal base ... and\n- 0x003f93d8 20746865 72652773 206e6f20 636f6d70 there's no comp\n- 0x003f93e8 6c656d65 6e742066 6f722069 74210a00 lement for it!..\n- 0x003f93f8 496c6c65 67616c20 62617365 20696e20 Illegal base in \n- 0x003f9408 61207068 61736520 77686572 65207468 a phase where th\n- 0x003f9418 65726520 73686f75 6c642062 65206e6f ere should be no\n- 0x003f9428 6e652e00 766f6964 20526561 643a3a6d ne..void Read::m\n- 0x003f9438 616b6543 6f6d706c 656d656e 74287374 akeComplement(st\n- 0x003f9448 643a3a76 6563746f 723c6368 61723e20 d::vector \n- 0x003f9458 2620736f 75726365 2c207374 643a3a76 & source, std::v\n- 0x003f9468 6563746f 723c6368 61723e20 26206465 ector & de\n- 0x003f9478 7374696e 6174696f 6e293b00 203a2074 stination);. : t\n- 0x003f9488 61672e66 726f6d20 00000000 203e3d20 ag.from .... >= \n- 0x003f9498 6765744c 656e5365 71282920 00000000 getLenSeq() ....\n- 0x003f94a8 766f6964 20526561 643a3a61 64645461 void Read::addTa\n- 0x003f94b8 67286d75 6c746974 61675f74 20262074 g(multitag_t & t\n- 0x003f94c8 61672900 203a2074 61672e74 6f200000 ag). : tag.to ..\n- 0x003f94d8 20666f72 20746167 3a200000 0a746f20 for tag: ...to \n- 0x003f94e8 28000000 29203e3d 206c656e 206f6620 (...) >= len of \n- 0x003f94f8 73657175 656e6365 20280000 3a20666f sequence (..: fo\n- 0x003f9508 756e6420 4d494e46 202f204d 49543220 und MINF / MIT2 \n- 0x003f9518 74616720 7768696c 65207365 7474696e tag while settin\n- 0x003f9528 67207461 67732e20 57697468 20726561 g tags. With rea\n- 0x003f9538 64206772 6f757073 2c207368 6f756c64 d groups, should\n- 0x003f9548 206e6f74 20626520 616e796d 6f72652c not be anymore,\n- 0x003f9558 206d7573 74206265 20706172 73656420 must be parsed \n- 0x003f9568 6f757420 6265666f 72652e00 766f6964 out before..void\n- 0x003f9578 20526561 643a3a73 65745461 67732863 Read::setTags(c\n- 0x003f9588 6f6e7374 20737464 3a3a7665 63746f72 onst std::vector\n- 0x003f9598 3c6d756c 74697461 675f743e 20262074 & t\n- 0x003f95a8 61677329 00000000 54686973 20636861 ags)....This cha\n- 0x003f95b8 72616374 6572206d 61792070 6f736520 racter may pose \n- 0x003f95c8 70726f62 6c656d73 20696e20 646f776e problems in down\n- 0x003f95d8 73747265 616d2070 726f6365 7373696e stream processin\n- 0x003f95e8 67206279 206f7468 65722070 726f6772 g by other progr\n- 0x003f95f8 616d732c 20697420 69732073 75676765 ams, it is sugge\n- 0x003f9608 73746564 20796f75 2063686f 6f736520 sted you choose \n- 0x003f9618 746f2063 68616e67 65207468 6174206e to change that n\n- 0x003f9628 616d652e 00000000 54686973 20697320 ame.....This is \n- 0x003f9638 74686520 73706163 65206368 61726163 the space charac\n- 0x003f9648 7465722c 206e616d 65732073 686f756c ter, names shoul\n- 0x003f9658 64206e6f 7420636f 6e746169 6e207468 d not contain th\n- 0x003f9668 61742100 54686973 20697320 6120636f at!.This is a co\n- 0x003f9678 6e74726f 6c20636f 64652c20 6e616d65 ntrol code, name\n- 0x003f9688 73207368 6f756c64 206e6f74 20636f6e s should not con\n- 0x003f9698 7461696e 20746861 74210000 5768696c tain that!..Whil\n- 0x003f96a8 65207472 79696e67 20746f20 73657420 e trying to set \n- 0x003f96b8 74686520 6e616d65 206f6620 72656164 the name of read\n- 0x003f96c8 200a0000 0a456e63 6f756e74 65726564 ....Encountered\n- 0x003f96d8 20636861 72616374 65722077 69746820 character with \n- 0x003f96e8 41534349 4920636f 64652000 0a497420 ASCII code ..It \n- 0x003f96f8 69732070 726f6261 626c7920 64756520 is probably due \n- 0x003f9708 746f2079 6f757220 696e7075 74206461 to your input da\n- 0x003f9718 74612c20 62757420 6e6f726d 616c6c79 ta, but normally\n- 0x003f9728 2c204d49 52412073 686f756c 64206861 , MIRA should ha\n- 0x003f9738 76652063 61756768 74207468 61742065 ve caught that e\n- 0x003f9748 61726c69 65722100 766f6964 20526561 arlier!.void Rea\n- 0x003f9758 643a3a73 65744e61 6d652863 6f6e7374 d::setName(const\n- 0x003f9768 20737464 3a3a7374 72696e67 2026206e std::string & n\n- 0x003f9778 616d6529 00000000 5761726e 696e6720 ame)....Warning \n- 0x003f9788 7768696c 65207365 7474696e 67207468 while setting th\n- 0x003f9798 65206e61 6d65206f 66207265 61642027 e name of read '\n- 0x003f97a8 00000000 273a0a45 6e636f75 6e746572 ....':.Encounter\n- 0x003f97b8 65642063 68617261 63746572 20776974 ed character wit\n- 0x003f97c8 68204153 43494920 636f6465 20000000 h ASCII code ...\n- 0x003f97d8 292e0a00 0a4e616d 653a2000 0a716c3a )....Name: ..ql:\n- 0x003f97e8 20000000 0971723a 20000000 0a736c3a ....qr: ....sl:\n- 0x003f97f8 20000000 0973723a 20000000 0a636c3a ....sr: ....cl:\n- 0x003f9808 20000000 0963723a 20000000 0a6d6c3a ....cr: ....ml:\n- 0x003f9818 20000000 096d723a 20000000 0a4c6566 ....mr: ....Lef\n- 0x003f9828 74636c69 703a2000 09526967 6874636c tclip: ..Rightcl\n- 0x003f9838 69703a20 00000000 094c656e 3a200000 ip: .....Len: ..\n- 0x003f9848 29094c65 6e536571 3a200000 0a4c6566 ).LenSeq: ...Lef\n- 0x003f9858 74657874 656e643a 20000000 09526967 textend: ....Rig\n- 0x003f9868 68746578 74656e64 3a200000 0a54656d htextend: ...Tem\n- 0x003f9878 706c6174 653a2000 0954656d 706c6174 plate: ..Templat\n- 0x003f9888 65207365 676d656e 743a2000 0a542d49 e segment: ..T-I\n- 0x003f9898 443a2000 09545061 72746e65 722d4944 D: ..TPartner-ID\n- 0x003f98a8 3a200000 52472d49 6e666f0a 00000000 : ..RG-Info.....\n- 0x003f98b8 52474944 3a200000 52474e3a 20000000 RGID: ..RGN: ...\n- 0x003f98c8 09534e3a 20000000 0a53503a 20000000 .SN: ....SP: ...\n- 0x003f98d8 09535069 6f3a2000 09535043 3a200000 .SPio: ..SPC: ..\n- 0x003f98e8 0949463a 20000000 0949543a 20000000 .IF: ....IT: ...\n- 0x003f98f8 09545369 6f3a2000 0a53543a 20000000 .TSio: ..ST: ...\n- 0x003f9908 29096e61 6d736368 656d3a20 00000000 ).namschem: ....\n- 0x003f9918 09534944 3a200000 0a44513a 20000000 .SID: ...DQ: ...\n- 0x003f9928 0a42423a 20000000 09526169 6c3a2000 .BB: ....Rail: .\n- 0x003f9938 09434552 3a200000 524c453a 20000000 .CER: ..RLE: ...\n- 0x003f9948 0a546167 733a0a00 54616720 00000000 .Tags:..Tag ....\n- 0x003f9958 220a0000 0a0a5265 61642073 697a6520 \".....Read size \n- 0x003f9968 70616464 65643a20 00000000 0a526561 padded: .....Rea\n- 0x003f9978 64207061 64646564 20736571 75656e63 d padded sequenc\n- 0x003f9988 653a0a00 466f7277 61726420 70616464 e:..Forward padd\n- 0x003f9998 65642064 69727479 2e0a0000 0a0a5265 ed dirty......Re\n- 0x003f99a8 61642063 6f6d706c 656d656e 74207369 ad complement si\n- 0x003f99b8 7a652070 61646465 643a2000 0a526561 ze padded: ..Rea\n- 0x003f99c8 64207061 64646564 20636f6d 706c656d d padded complem\n- 0x003f99d8 656e7420 73657175 656e6365 3a0a0000 ent sequence:...\n- 0x003f99e8 436f6d70 6c656d65 6e742070 61646465 Complement padde\n- 0x003f99f8 64206469 7274792e 0a000000 0a526561 d dirty......Rea\n- 0x003f9a08 64207061 64646564 20736571 75656e63 d padded sequenc\n- 0x003f9a18 652c2061 646a7573 746d656e 742c2071 e, adjustment, q\n- 0x003f9a28 75616c69 74792c20 62617365 666c6167 uality, baseflag\n- 0x003f9a38 733a0a00 20696e76 21000000 094e6f41 s:.. inv!....NoA\n- 0x003f9a48 646a0000 663a2000 76616c69 64200000 dj..f: .valid ..\n- 0x003f9a58 696e766c 64200000 736c7020 00000000 invld ..slp ....\n- 0x003f9a68 66722000 6d737420 00000000 6b6d7266 fr .mst ....kmrf\n- 0x003f9a78 20000000 723b2000 53616e69 74792063 ...r; .Sanity c\n- 0x003f9a88 6865636b 206f6620 72656164 20270000 heck of read '..\n- 0x003f9a98 27206661 696c6564 00000000 20686173 ' failed.... has\n- 0x003f9aa8 206e6f20 76616c69 64206461 74613f00 no valid data?.\n- 0x003f9ab8 766f6964 20526561 643a3a69 6e746567 void Read::integ\n- 0x003f9ac8 72697479 43686563 6b282920 636f6e73 rityCheck() cons\n- 0x003f9ad8 74200000 25780000 72656164 77697468 t ..%x..readwith\n- 0x003f9ae8 6f75746e 616d655f 00000000 3e69766c outname_....>ivl\n- 0x003f9af8 645f0000 0a300a00 30302000 766f6964 d_...0..00 .void\n- 0x003f9b08 20526561 643a3a64 756d7054 61677341 Read::dumpTagsA\n- 0x003f9b18 73474646 33287374 643a3a6f 73747265 sGFF3(std::ostre\n- 0x003f9b28 616d2026 206f7374 72290000 094d4952 am & ostr)...MIR\n- 0x003f9b38 41096578 70657269 6d656e74 616c5f66 A.experimental_f\n- 0x003f9b48 65617475 72650931 0931092e 092e092e eature.1.1......\n- 0x003f9b58 0973743d 00000000 3b736e3d 00000000 .st=....;sn=....\n- 0x003f9b68 3b6d743d 00000000 3b62623d 31000000 ;mt=....;bb=1...\n- 0x003f9b78 3b72723d 31000000 3b636572 3d310000 ;rr=1...;cer=1..\n- 0x003f9b88 3b6d6972 61697461 673d4d49 54320a00 ;miraitag=MIT2..\n- 0x003f9b98 766f6964 20636861 6e676542 61736549 void changeBaseI\n- 0x003f9ba8 6e536571 75656e63 65286368 61722062 nSequence(char b\n- 0x003f9bb8 6173652c 20626173 655f7175 616c6974 ase, base_qualit\n- 0x003f9bc8 795f7420 7175616c 6974792c 20696e74 y_t quality, int\n- 0x003f9bd8 33322070 6f736974 696f6e29 00000000 32 position)....\n- 0x003f9be8 3a20706f 73697469 6f6e2028 00000000 : position (....\n- 0x003f9bf8 29203e3d 2073697a 65206f66 20726561 ) >= size of rea\n- 0x003f9c08 64202800 29203e3d 20524541 5f706164 d (.) >= REA_pad\n- 0x003f9c18 6465645f 636f6d70 6c656d65 6e747365 ded_complementse\n- 0x003f9c28 7175656e 63652e73 697a6520 28000000 quence.size (...\n- 0x003f9c38 3a206370 6f736974 696f6e20 28000000 : cposition (...\n- 0x003f9c48 2029203e 3d205245 415f7061 64646564 ) >= REA_padded\n- 0x003f9c58 5f636f6d 706c656d 656e7473 65717565 _complementseque\n- 0x003f9c68 6e63652e 73697a65 20280000 506f7369 nce.size (..Posi\n- 0x003f9c78 74696f6e 203e3d20 6c656e20 6f662063 tion >= len of c\n- 0x003f9c88 6c697070 65642072 65616420 3f000000 lipped read ?...\n- 0x003f9c98 766f6964 20526561 643a3a63 68616e67 void Read::chang\n- 0x003f9ca8 65426173 65496e43 6c697070 65645365 eBaseInClippedSe\n- 0x003f9cb8 7175656e 63652863 68617220 62617365 quence(char base\n- 0x003f9cc8 2c206261 73655f71 75616c69 74795f74 , base_quality_t\n- 0x003f9cd8 20717561 6c697479 2c207569 6e743332 quality, uint32\n- 0x003f9ce8 20706f73 6974696f 6e290000 766f6964 position)..void\n- 0x003f9cf8 20526561 643a3a63 68616e67 65426173 Read::changeBas\n- 0x003f9d08 65496e43 6c697070 6564436f 6d706c65 eInClippedComple\n- 0x003f9d18 6d656e74 53657175 656e6365 28636861 mentSequence(cha\n- 0x003f9d28 72206261 73652c20 62617365 5f717561 r base, base_qua\n- 0x003f9d38 6c697479 5f742071 75616c69 74792c20 lity_t quality, \n- 0x003f9d48 75696e74 33322070 6f736974 696f6e29 uint32 position)\n- 0x003f9d58 00000000 766f6964 20526561 643a3a63 ....void Read::c\n- 0x003f9d68 68616e67 6541646a 7573746d 656e7428 hangeAdjustment(\n- 0x003f9d78 75696e74 33322070 6f736974 696f6e2c uint32 position,\n- 0x003f9d88 20696e74 3332206e 65776164 6a757374 int32 newadjust\n- 0x003f9d98 6d656e74 29000000 3a207472 79696e67 ment)...: trying\n- 0x003f9da8 20746f20 6368616e 67652061 646a7573 to change adjus\n- 0x003f9db8 746d656e 7420696e 20726561 64207768 tment in read wh\n- 0x003f9dc8 69636820 646f6573 206e6f74 20686176 ich does not hav\n- 0x003f9dd8 6520616e 793f0000 3a207472 79696e67 e any?..: trying\n- 0x003f9de8 20746f20 6368616e 67652061 646a7573 to change adjus\n- 0x003f9df8 746d656e 74206174 20706f73 6974696f tment at positio\n- 0x003f9e08 6e200000 20627574 2073697a 65206f66 n .. but size of\n- 0x003f9e18 2061646a 7573746d 656e7420 6973206f adjustment is o\n- 0x003f9e28 6e6c7920 00000000 766f6964 20526561 nly ....void Rea\n- 0x003f9e38 643a3a73 6574436c 69706f66 66732875 d::setClipoffs(u\n- 0x003f9e48 696e7433 32206c63 6c69702c 2075696e int32 lclip, uin\n- 0x003f9e58 74333220 72636c69 702c2062 6f6f6c20 t32 rclip, bool \n- 0x003f9e68 666f7263 65290000 6c636c69 70203c20 force)..lclip < \n- 0x003f9e78 303f0000 72636c69 70203c20 303f0000 0?..rclip < 0?..\n- 0x003f9e88 766f6964 20526561 643a3a73 65744c51 void Read::setLQ\n- 0x003f9e98 436c6970 6f666673 28696e74 3332206c Clipoffs(int32 l\n- 0x003f9ea8 636c6970 29000000 766f6964 20526561 clip)...void Rea\n- 0x003f9eb8 643a3a73 65745251 436c6970 6f666673 d::setRQClipoffs\n- 0x003f9ec8 28696e74 33322072 636c6970 29000000 (int32 rclip)...\n- 0x003f9ed8 766f6964 20526561 643a3a73 65744c53 void Read::setLS\n- 0x003f9ee8 436c6970 6f666673 28696e74 3332206c Clipoffs(int32 l\n- 0x003f9ef8 636c6970 29000000 766f6964 20526561 clip)...void Rea\n- 0x003f9f08 643a3a73 65745253 436c6970 6f666673 d::setRSClipoffs\n- 0x003f9f18 28696e74 33322072 636c6970 29000000 (int32 rclip)...\n- 0x003f9f28 696e7433 32205265 61643a3a 7365744c int32 Read::setL\n- 0x003f9f38 4d436c69 706f6666 28696e74 3332206c MClipoff(int32 l\n- 0x003f9f48 636c6970 29000000 696e7433 32205265 clip)...int32 Re\n- 0x003f9f58 61643a3a 73657452 4d436c69 706f6666 ad::setRMClipoff\n- 0x003f9f68 28696e74 33322072 636c6970 29000000 (int32 rclip)...\n- 0x003f9f78 74726965 6420746f 20736574 20612062 tried to set a b\n- 0x003f9f88 61736520 27000000 27202841 53434949 ase '...' (ASCII\n- 0x003f9f98 3a200000 292c2077 68696368 20697320 : ..), which is \n- 0x003f9fa8 6e6f7420 61207661 6c696420 49555041 not a valid IUPA\n- 0x003f9fb8 43206261 7365206e 6f72204e 2c20582c C base nor N, X,\n- 0x003f9fc8 202d206f 7220402e 00000000 766f6964 - or @.....void\n- 0x003f9fd8 20526561 643a3a73 65745365 7175656e Read::setSequen\n- 0x003f9fe8 63654672 6f6d5374 72696e67 28636f6e ceFromString(con\n- 0x003f9ff8 73742063 68617220 2a207365 7175656e st char * sequen\n- 0x003fa008 63652900 6e6f206e 616d6520 67697665 ce).no name give\n- 0x003fa018 6e000000 766f6964 20526561 643a3a69 n...void Read::i\n- 0x003fa028 6e697469 616c6973 65526561 6428626f nitialiseRead(bo\n- 0x003fa038 6f6c2070 72657365 7276655f 6f726967 ol preserve_orig\n- 0x003fa048 696e616c 732c202e 2e2e2c20 2e2e2e3c inals, ..., ...<\n- 0x003fa058 62617365 5f717561 6c697479 5f743e2c base_quality_t>,\n- 0x003fa068 202e2e2e 29000000 7175616c 69746965 ...)...qualitie\n- 0x003fa078 732e7369 7a652829 20000000 20213d20 s.size() ... != \n- 0x003fa088 73657175 656e6365 2e73697a 65282920 sequence.size() \n- 0x003fa098 00000000 20666f72 3a200000 61646a75 .... for: ..adju\n- 0x003fa0a8 73746d65 6e74732e 73697a65 28292000 stments.size() .\n- 0x003fa0b8 426f7468 20736571 20616e64 20636f6d Both seq and com\n- 0x003fa0c8 706c2e73 65712e20 61726520 74616767 pl.seq. are tagg\n- 0x003fa0d8 65642064 69727479 2e000000 766f6964 ed dirty....void\n- 0x003fa0e8 20526561 643a3a68 656c7065 725f7265 Read::helper_re\n- 0x003fa0f8 66726573 68506164 64656453 65717565 freshPaddedSeque\n- 0x003fa108 6e636528 29000000 766f6964 20526561 nce()...void Rea\n- 0x003fa118 643a3a73 6d6f6f74 68536571 75656e63 d::smoothSequenc\n- 0x003fa128 65526570 6c616365 2875696e 74333220 eReplace(uint32 \n- 0x003fa138 706f7369 74696f6e 2c207569 6e743332 position, uint32\n- 0x003fa148 206c656e 2c207374 643a3a73 74643a3a len, std::std::\n- 0x003fa158 73747269 6e672026 20726570 6c616365 string & replace\n- 0x003fa168 6d656e74 29000000 43757272 656e746c ment)...Currentl\n- 0x003fa178 7920646f 65736e27 7420776f 726b206f y doesn't work o\n- 0x003fa188 6e20524c 45000000 54616773 206e6f74 n RLE...Tags not\n- 0x003fa198 20656d70 74792c20 6e6f7420 696d706c empty, not impl\n- 0x003fa1a8 656d656e 74656420 61746d00 0a6e0a00 emented atm..n..\n- 0x003fa1b8 4069766c 645f0000 40000000 0a2b0a00 @ivld_..@....+..\n- 0x003fa1c8 766f6964 20526561 643a3a64 756d7041 void Read::dumpA\n- 0x003fa1d8 73434146 28737464 3a3a6f73 74726561 sCAF(std::ostrea\n- 0x003fa1e8 6d202620 6f737472 29000000 53657175 m & ostr)...Sequ\n- 0x003fa1f8 656e6365 203a2069 766c645f 00000000 ence : ivld_....\n- 0x003fa208 49735f72 6561640a 0a000000 0a444e41 Is_read......DNA\n- 0x003fa218 203a2000 0a426173 65517561 6c697479 : ..BaseQuality\n- 0x003fa228 203a2000 53657175 656e6365 203a2000 : .Sequence : .\n- 0x003fa238 49735f72 6561640a 50616464 65640a00 Is_read.Padded..\n- 0x003fa248 53657175 656e6369 6e675f76 6563746f Sequencing_vecto\n- 0x003fa258 72202200 54656d70 6c617465 20220000 r \".Template \"..\n- 0x003fa268 53747261 6e642046 6f727761 72640a00 Strand Forward..\n- 0x003fa278 53747261 6e642052 65766572 73650a00 Strand Reverse..\n- 0x003fa288 496e7365 72745f73 697a6520 00000000 Insert_size ....\n- 0x003fa298 42617365 5f63616c 6c657220 22000000 Base_caller \"...\n- 0x003fa2a8 41737065 64202200 50726f63 65737353 Asped \".ProcessS\n- 0x003fa2b8 74617475 73202200 44796520 22000000 tatus \".Dye \"...\n- 0x003fa2c8 5072696d 65722000 5365715f 76656320 Primer .Seq_vec \n- 0x003fa2d8 53564543 20312000 5365715f 76656320 SVEC 1 .Seq_vec \n- 0x003fa2e8 53564543 20000000 436c6970 70696e67 SVEC ...Clipping\n- 0x003fa2f8 20515541 4c200000 436c6f6e 655f7665 QUAL ..Clone_ve\n- 0x003fa308 63204356 45432031 20000000 436c6f6e c CVEC 1 ...Clon\n- 0x003fa318 655f7665 63204356 45432000 54616720 e_vec CVEC .Tag \n- 0x003fa328 4d495432 20312031 20227374 3d000000 MIT2 1 1 \"st=...\n- 0x003fa338 54797065 20414249 20534f4c 6944206e Type ABI SOLiD n\n- 0x003fa348 65656473 206d6f72 65207375 70706f72 eeds more suppor\n- 0x003fa358 7420372e 00000000 466f7220 72656164 t 7.....For read\n- 0x003fa368 20000000 3a20756e 6b6e6f77 6e207365 ...: unknown se\n- 0x003fa378 71747970 6520636f 64652000 416c6c6f qtype code .Allo\n- 0x003fa388 77656420 6172653a 2053616e 6765722c wed are: Sanger,\n- 0x003fa398 20343534 2c20496f 6e546f72 2c205061 454, IonTor, Pa\n- 0x003fa3a8 6342696f 4c512c20 50616342 696f4851 cBioLQ, PacBioHQ\n- 0x003fa3b8 2c205465 78742c20 536f6c65 78612c20 , Text, Solexa, \n- 0x003fa3c8 534f4c69 442e0a00 496c6c65 67616c20 SOLiD...Illegal \n- 0x003fa3d8 72656164 74797065 3f000000 3b70633d readtype?...;pc=\n- 0x003fa3e8 73660000 3b70633d 73620000 3b70633d sf..;pc=sb..;pc=\n- 0x003fa3f8 73750000 3b70633d 66720000 3b70633d su..;pc=fr..;pc=\n- 0x003fa408 72660000 4f6f6f6f 70733f20 496c6c65 rf..Oooops? Ille\n- 0x003fa418 67616c20 7465706c 61746520 706c6163 gal teplate plac\n- 0x003fa428 656d656e 7420636f 64652000 52440969 ement code .RD.i\n- 0x003fa438 766c645f 00000000 0a45520a 00000000 vld_.....ER.....\n- 0x003fa448 52440900 52470900 4c520900 52530900 RD..RG..LR..RS..\n- 0x003fa458 52510900 53560900 544e0900 54530900 RQ..SV..TN..TS..\n- 0x003fa468 534c0900 53520900 514c0900 51520900 SL..SR..QL..QR..\n- 0x003fa478 434c0900 43520900 414f0900 45520a00 CL..CR..AO..ER..\n- 0x003fa488 52540000 3a206761 7073697a 65202800 RT..: gapsize (.\n- 0x003fa498 29203c20 30203f00 766f6964 20526561 ) < 0 ?.void Rea\n- 0x003fa4a8 643a3a73 6574436c 69706f66 6673746f d::setClipoffsto\n- 0x003fa4b8 4d61736b 65644368 61727328 696e7433 MaskedChars(int3\n- 0x003fa4c8 32206761 7073697a 652c2069 6e743332 2 gapsize, int32\n- 0x003fa4d8 2066726f 6e746773 2c20696e 74333220 frontgs, int32 \n- 0x003fa4e8 656e6467 732c2062 6f6f6c20 616c6c6f endgs, bool allo\n- 0x003fa4f8 774e2900 766f6964 20526561 643a3a66 wN).void Read::f\n- 0x003fa508 69785a65 726f4761 70517561 6c732829 ixZeroGapQuals()\n- 0x003fa518 00000000 766f6964 20526561 643a3a74 ....void Read::t\n- 0x003fa528 72616e73 666f726d 47617073 546f4e73 ransformGapsToNs\n- 0x003fa538 28290000 3a207265 6164706f 73202800 ()..: readpos (.\n- 0x003fa548 696e7433 32206765 7441646a 7573746d int32 getAdjustm\n- 0x003fa558 656e7450 6f734f66 52656164 506f7328 entPosOfReadPos(\n- 0x003fa568 696e7433 3220706f 73697469 6f6e2900 int32 position).\n- 0x003fa578 696e7433 32205265 61643a3a 6765744c int32 Read::getL\n- 0x003fa588 6f776572 4e6f6e47 61704164 6a757374 owerNonGapAdjust\n- 0x003fa598 6d656e74 506f734f 66526561 64506f73 mentPosOfReadPos\n- 0x003fa5a8 28636f6e 73742075 696e7433 3220706f (const uint32 po\n- 0x003fa5b8 73697469 6f6e2920 636f6e73 74000000 sition) const...\n- 0x003fa5c8 696e7433 32205265 61643a3a 67657455 int32 Read::getU\n- 0x003fa5d8 70706572 4e6f6e47 61704164 6a757374 pperNonGapAdjust\n- 0x003fa5e8 6d656e74 506f734f 66526561 64506f73 mentPosOfReadPos\n- 0x003fa5f8 28636f6e 73742075 696e7433 3220706f (const uint32 po\n- 0x003fa608 73697469 6f6e2920 636f6e73 74000000 sition) const...\n- 0x003fa618 29203e3d 20524541 5f706164 6465645f ) >= REA_padded_\n- 0x003fa628 73657175 656e6365 2e73697a 65202800 sequence.size (.\n- 0x003fa638 696e7433 32205265 61643a3a 6765744c int32 Read::getL\n- 0x003fa648 6f776572 4e6f6e47 6170506f 734f6652 owerNonGapPosOfR\n- 0x003fa658 65616450 6f732863 6f6e7374 2075696e eadPos(const uin\n- 0x003fa668 74333220 706f7369 74696f6e 2920636f t32 position) co\n- 0x003fa678 6e737400 696e7433 32205265 61643a3a nst.int32 Read::\n- 0x003fa688 67657455 70706572 4e6f6e47 6170506f getUpperNonGapPo\n- 0x003fa698 734f6652 65616450 6f732863 6f6e7374 sOfReadPos(const\n- 0x003fa6a8 2075696e 74333220 706f7369 74696f6e uint32 position\n- 0x003fa6b8 2920636f 6e737400 636f6e73 74206368 ) const.const ch\n- 0x003fa6c8 6172202a 20526561 643a3a67 6574436c ar * Read::getCl\n- 0x003fa6d8 69707065 64536571 41734368 61722829 ippedSeqAsChar()\n- 0x003fa6e8 00000000 63686172 20526561 643a3a67 ....char Read::g\n- 0x003fa6f8 65744261 7365496e 53657175 656e6365 etBaseInSequence\n- 0x003fa708 2875696e 74333220 706f7329 00000000 (uint32 pos)....\n- 0x003fa718 63686172 20526561 643a3a67 65744261 char Read::getBa\n- 0x003fa728 7365496e 436c6970 70656453 65717565 seInClippedSeque\n- 0x003fa738 6e636528 75696e74 33322070 6f732900 nce(uint32 pos).\n- 0x003fa748 75696e74 33322052 6561643a 3a676574 uint32 Read::get\n- 0x003fa758 4c6f7765 72426f75 6e64506f 734f6642 LowerBoundPosOfB\n- 0x003fa768 61736552 756e2875 696e7433 3220706f aseRun(uint32 po\n- 0x003fa778 732c2063 68617220 62617365 2c20636f s, char base, co\n- 0x003fa788 6e737420 626f6f6c 20616c73 6f74616b nst bool alsotak\n- 0x003fa798 65676170 2920636f 6e737400 75696e74 egap) const.uint\n- 0x003fa7a8 33322052 6561643a 3a676574 55707065 32 Read::getUppe\n- 0x003fa7b8 72426f75 6e64506f 734f6642 61736552 rBoundPosOfBaseR\n- 0x003fa7c8 756e2875 696e7433 3220706f 732c2063 un(uint32 pos, c\n- 0x003fa7d8 68617220 62617365 2c20636f 6e737420 har base, const \n- 0x003fa7e8 626f6f6c 20616c73 6f74616b 65676170 bool alsotakegap\n- 0x003fa7f8 2920636f 6e737400 75696e74 33322052 ) const.uint32 R\n- 0x003fa808 6561643a 3a676574 4c656e4f 66476170 ead::getLenOfGap\n- 0x003fa818 52756e28 75696e74 33322070 6f732920 Run(uint32 pos) \n- 0x003fa828 636f6e73 74000000 746f6c65 72616e63 const...toleranc\n- 0x003fa838 656c656e 203c3000 766f6964 20526561 elen <0.void Rea\n- 0x003fa848 643a3a74 72616e73 66657253 56546167 d::transferSVTag\n- 0x003fa858 73546f43 6c697028 696e7433 3220746f sToClip(int32 to\n- 0x003fa868 6c657261 6e63656c 656e2900 636c6970 lerancelen).clip\n- 0x003fa878 73656172 63686c65 6e203c30 00000000 searchlen <0....\n- 0x003fa888 20616c72 65616479 20524c45 643f0000 already RLEd?..\n- 0x003fa898 766f6964 20526561 643a3a72 6c655265 void Read::rleRe\n- 0x003fa8a8 61642829 00000000 206e6f74 20524c45 ad().... not RLE\n- 0x003fa8b8 643f0000 766f6964 20526561 643a3a64 d?..void Read::d\n- 0x003fa8c8 65524c45 52656164 28290000 3020524c eRLERead()..0 RL\n- 0x003fa8d8 45207661 6c756520 61742070 6f732000 E value at pos .\n- 0x003fa8e8 31205245 415f7061 64646564 5f736571 1 REA_padded_seq\n- 0x003fa8f8 75656e63 652e7369 7a652829 3c676574 uence.size()siz\n- 0x003fa9a8 6528293c 67657452 69676874 436c6970 e() \n- 0x003facf8 5245415f 70616464 65645f63 6f6d706c REA_padded_compl\n- 0x003fad08 656d656e 74736571 75656e63 652e7369 ementsequence.si\n- 0x003fad18 7a652028 00000000 3a20636f 6d706c65 ze (....: comple\n- 0x003fad28 6d656e74 5f706f73 6974696f 6e202800 ment_position (.\n- 0x003fad38 203e2052 45415f71 75616c69 74696573 > REA_qualities\n- 0x003fad48 2e73697a 65202800 29203e20 5245415f .size (.) > REA_\n- 0x003fad58 61646a75 73746d65 6e74732e 73697a65 adjustments.size\n- 0x003fad68 20280000 203e2052 45415f72 6c657670 (.. > REA_rlevp\n- 0x003fad78 74722d3e 73697a65 20280000 203e2052 tr->size (.. > R\n- 0x003fad88 45415f62 706f7368 61736873 74617473 EA_bposhashstats\n- 0x003fad98 2e73697a 65202800 766f6964 20526561 .size (.void Rea\n- 0x003fada8 643a3a69 6e736572 74426173 65496e53 d::insertBaseInS\n- 0x003fadb8 65717565 6e636528 63686172 20626173 equence(char bas\n- 0x003fadc8 652c2062 6173655f 7175616c 6974795f e, base_quality_\n- 0x003fadd8 74207175 616c6974 792c2069 6e743332 t quality, int32\n- 0x003fade8 20706f73 6974696f 6e2c2062 6f6f6c20 position, bool \n- 0x003fadf8 65787465 6e64735f 636c6970 7065645f extends_clipped_\n- 0x003fae08 61726561 29000000 29203e20 5245415f area)...) > REA_\n- 0x003fae18 70616464 65645f73 65717565 6e63652e padded_sequence.\n- 0x003fae28 73697a65 20280000 29203e20 5245415f size (..) > REA_\n- 0x003fae38 7175616c 69746965 732e7369 7a652028 qualities.size (\n- 0x003fae48 00000000 203e2052 45415f61 646a7573 .... > REA_adjus\n- 0x003fae58 746d656e 74732e73 697a6520 28000000 tments.size (...\n- 0x003fae68 506f7369 74696f6e 203e206c 656e206f Position > len o\n- 0x003fae78 6620636c 69707065 64207265 6164203f f clipped read ?\n- 0x003fae88 00000000 766f6964 20526561 643a3a69 ....void Read::i\n- 0x003fae98 6e736572 74426173 65496e43 6c697070 nsertBaseInClipp\n- 0x003faea8 65645365 7175656e 63652863 68617220 edSequence(char \n- 0x003faeb8 62617365 2c206261 73655f71 75616c69 base, base_quali\n- 0x003faec8 74795f74 20717561 6c697479 2c207569 ty_t quality, ui\n- 0x003faed8 6e743332 20706f73 6974696f 6e2c2062 nt32 position, b\n- 0x003faee8 6f6f6c20 65787465 6e64735f 636c6970 ool extends_clip\n- 0x003faef8 7065645f 61726561 29000000 766f6964 ped_area)...void\n- 0x003faf08 20526561 643a3a69 6e736572 74426173 Read::insertBas\n- 0x003faf18 65496e43 6c697070 6564436f 6d706c65 eInClippedComple\n- 0x003faf28 6d656e74 53657175 656e6365 28636861 mentSequence(cha\n- 0x003faf38 72206261 73652c20 62617365 5f717561 r base, base_qua\n- 0x003faf48 6c697479 5f742071 75616c69 74792c20 lity_t quality, \n- 0x003faf58 696e7433 3220706f 73697469 6f6e2c20 int32 position, \n- 0x003faf68 626f6f6c 20657874 656e6473 5f636c69 bool extends_cli\n- 0x003faf78 70706564 5f617265 61290000 766f6964 pped_area)..void\n- 0x003faf88 20526561 643a3a64 656c6574 65426173 Read::deleteBas\n- 0x003faf98 6546726f 6d436f6d 706c656d 656e7453 eFromComplementS\n- 0x003fafa8 65717565 6e636528 696e7433 32207570 equence(int32 up\n- 0x003fafb8 6f736974 696f6e29 00000000 20636f6d osition).... com\n- 0x003fafc8 706c656d 656e745f 706f7369 74696f6e plement_position\n- 0x003fafd8 20280000 29203e3d 20524541 5f61646a (..) >= REA_adj\n- 0x003fafe8 7573746d 656e7473 2e73697a 65202800 ustments.size (.\n- 0x003faff8 203e3d20 5245415f 726c6576 7074722d >= REA_rlevptr-\n- 0x003fb008 3e73697a 65202800 766f6964 20526561 >size (.void Rea\n- 0x003fb018 643a3a64 656c6574 65426173 6546726f d::deleteBaseFro\n- 0x003fb028 6d536571 75656e63 6528696e 74333220 mSequence(int32 \n- 0x003fb038 706f7369 74696f6e 29000000 203e3d20 position)... >= \n- 0x003fb048 5245415f 61646a75 73746d65 6e74732e REA_adjustments.\n- 0x003fb058 73697a65 20280000 203e3d20 5245415f size (.. >= REA_\n- 0x003fb068 62706f73 68617368 73746174 732e7369 bposhashstats.si\n- 0x003fb078 7a652028 00000000 766f6964 20526561 ze (....void Rea\n- 0x003fb088 643a3a72 656d6f76 65476170 7346726f d::removeGapsFro\n- 0x003fb098 6d526561 64282900 766f6964 20526561 mRead().void Rea\n- 0x003fb0a8 643a3a63 6f727265 63744e53 74726574 d::correctNStret\n- 0x003fb0b8 63682863 6f6e7374 20696e74 33322066 ch(const int32 f\n- 0x003fb0c8 726f6d2c 20636f6e 73742069 6e743332 rom, const int32\n- 0x003fb0d8 20746f2c 20696e74 33322063 68616e67 to, int32 chang\n- 0x003fb0e8 65657374 696d2900 3a206672 6f6d2028 eestim).: from (\n- 0x003fb0f8 00000000 29203c30 203f0000 3a20746f ....) <0 ?..: to\n- 0x003fb108 20280000 2066726f 6d3a2000 206e6f74 (.. from: . not\n- 0x003fb118 20657863 6c757369 76656c79 204e206f exclusively N o\n- 0x003fb128 72202a3f 00000000 766f6964 20526561 r *?....void Rea\n- 0x003fb138 643a3a64 656c6574 65426173 6546726f d::deleteBaseFro\n- 0x003fb148 6d436c69 70706564 53657175 656e6365 mClippedSequence\n- 0x003fb158 2875696e 74333220 706f7369 74696f6e (uint32 position\n- 0x003fb168 29000000 766f6964 20526561 643a3a64 )...void Read::d\n- 0x003fb178 656c6574 65426173 6546726f 6d436c69 eleteBaseFromCli\n- 0x003fb188 70706564 436f6d70 6c656d65 6e745365 ppedComplementSe\n- 0x003fb198 7175656e 63652869 6e743332 20706f73 quence(int32 pos\n- 0x003fb1a8 6974696f 6e290000 636f6e73 74206368 ition)..const ch\n- 0x003fb1b8 6172202a 20526561 643a3a67 6574436c ar * Read::getCl\n- 0x003fb1c8 69707065 64436f6d 706c656d 656e7453 ippedComplementS\n- 0x003fb1d8 65714173 43686172 28290000 636f6e73 eqAsChar()..cons\n- 0x003fb1e8 74207374 643a3a76 6563746f 723c6368 t std::vector::iterator Re\n- 0x003fb208 61643a3a 67657443 6c697070 6564436f ad::getClippedCo\n- 0x003fb218 6d706c65 6d656e74 53657149 74657261 mplementSeqItera\n- 0x003fb228 746f7228 29000000 3a20636f 6d706c65 tor()...: comple\n- 0x003fb238 6d656e74 5f706f73 6c202800 29203e3d ment_posl (.) >=\n- 0x003fb248 20524541 5f717561 6c697469 65732e73 REA_qualities.s\n- 0x003fb258 697a6528 00000000 62617365 5f717561 ize(....base_qua\n- 0x003fb268 6c697479 5f742052 6561643a 3a717565 lity_t Read::que\n- 0x003fb278 72794176 65726167 65517561 6c496e43 ryAverageQualInC\n- 0x003fb288 6f6d706c 656d656e 74536571 75656e63 omplementSequenc\n- 0x003fb298 6528696e 74333220 706f736c 2c20696e e(int32 posl, in\n- 0x003fb2a8 74333220 706f7372 2c20626f 6f6c2073 t32 posr, bool s\n- 0x003fb2b8 6b69704e 732c2062 6f6f6c20 736b6970 kipNs, bool skip\n- 0x003fb2c8 53746172 73290000 496c6c65 67616c20 Stars)..Illegal \n- 0x003fb2d8 62617365 3a200000 496c6c65 67616c20 base: ..Illegal \n- 0x003fb2e8 62617365 20666f75 6e643a20 00000000 base found: ....\n- 0x003fb2f8 62617365 5f717561 6c697479 5f742052 base_quality_t R\n- 0x003fb308 6561643a 3a717565 72794176 65726167 ead::queryAverag\n- 0x003fb318 65517561 6c496e53 65717565 6e636528 eQualInSequence(\n- 0x003fb328 696e7433 3220706f 736c2c20 696e7433 int32 posl, int3\n- 0x003fb338 3220706f 73722c20 626f6f6c 20736b69 2 posr, bool ski\n- 0x003fb348 704e732c 20626f6f 6c20736b 69705374 pNs, bool skipSt\n- 0x003fb358 61727329 00000000 766f6964 20526561 ars)....void Rea\n- 0x003fb368 643a3a64 756d7041 73414345 28737464 d::dumpAsACE(std\n- 0x003fb378 3a3a6f73 74726561 6d202620 6f737472 ::ostream & ostr\n- 0x003fb388 2c20696e 74333220 64697265 6374696f , int32 directio\n- 0x003fb398 6e290000 0a524420 00000000 20302030 n)...RD .... 0 0\n- 0x003fb3a8 00000000 4f756368 2c206661 696c6564 ....Ouch, failed\n- 0x003fb3b8 20736563 6f6e6420 63686563 6b2e0000 second check...\n- 0x003fb3c8 0a514120 00000000 0a445320 00000000 .QA .....DS ....\n- 0x003fb3d8 54454d50 4c415445 3a200000 4348524f TEMPLATE: ..CHRO\n- 0x003fb3e8 4d41545f 46494c45 3a200000 5048445f MAT_FILE: ..PHD_\n- 0x003fb3f8 46494c45 3a200000 2e706864 2e312000 FILE: ...phd.1 .\n- 0x003fb408 54494d45 3a205361 74204a61 6e202031 TIME: Sat Jan 1\n- 0x003fb418 2031313a 31313a31 31204d45 53542032 11:11:11 MEST 2\n- 0x003fb428 30303000 52547b0a 00000000 204d4952 000.RT{..... MIR\n- 0x003fb438 41200000 20303230 3230323a 31323132 A .. 020202:1212\n- 0x003fb448 31320a00 7d0a0a00 434f4d4d 454e547b 12..}...COMMENT{\n- 0x003fb458 0a000000 0a437d0a 00000000 636f6e73 .....C}.....cons\n- 0x003fb468 74207374 643a3a76 6563746f 723c6368 t std::vector::iterator Re\n- 0x003fb488 61643a3a 67657443 6c697070 65645365 ad::getClippedSe\n- 0x003fb498 71497465 7261746f 72282900 5175616c qIterator().Qual\n- 0x003fb4a8 69747920 636c6970 70696e67 20657272 ity clipping err\n- 0x003fb4b8 6f723a20 6e6f2062 61636b77 61726420 or: no backward \n- 0x003fb4c8 6375746f 66662c20 62757420 666f7277 cutoff, but forw\n- 0x003fb4d8 61726420 666f756e 643f0000 766f6964 ard found?..void\n- 0x003fb4e8 20526561 643a3a70 6572666f 726d5175 Read::performQu\n- 0x003fb4f8 616c6974 79436c69 70287569 6e743332 alityClip(uint32\n- 0x003fb508 20617667 7175616c 2c207569 6e743332 avgqual, uint32\n- 0x003fb518 2077696e 6c656e29 00000000 43455200 winlen)....CER.\n- 0x003fb528 736e0000 6d740000 72720000 70630000 sn..mt..rr..pc..\n- 0x003fb538 4572726f 7220696e 20000000 3a206b65 Error in ...: ke\n- 0x003fb548 79207479 70652027 70632720 68617320 y type 'pc' has \n- 0x003fb558 756e6b6e 6f776e20 76616c75 6520696e unknown value in\n- 0x003fb568 204d4954 32207461 673a2000 766f6964 MIT2 tag: .void\n- 0x003fb578 20526561 643a3a65 78747261 63744d49 Read::extractMI\n- 0x003fb588 4e465461 67496e66 6f287374 643a3a76 NFTagInfo(std::v\n- 0x003fb598 6563746f 723c6d75 6c746974 61675f74 ector & tags, const \n- 0x003fb5b8 7374643a 3a737472 696e6720 26207265 std::string & re\n- 0x003fb5c8 61646e61 6d652c20 7374643a 3a737472 adname, std::str\n- 0x003fb5d8 696e6720 26206475 6d6d795f 73747261 ing & dummy_stra\n- 0x003fb5e8 696e6e61 6d652c20 7374643a 3a737472 inname, std::str\n- 0x003fb5f8 696e6720 26206475 6d6d795f 73657174 ing & dummy_seqt\n- 0x003fb608 7970656e 616d652c 20737464 3a3a7374 ypename, std::st\n- 0x003fb618 72696e67 20262064 756d6d79 5f6d6163 ring & dummy_mac\n- 0x003fb628 68696e65 74797065 2c20696e 74382026 hinetype, int8 &\n- 0x003fb638 2064756d 6d795f74 706c6163 656d656e dummy_tplacemen\n- 0x003fb648 74636f64 652c2062 6f6f6c20 26206475 tcode, bool & du\n- 0x003fb658 6d6d795f 69736262 2c20626f 6f6c2026 mmy_isbb, bool &\n- 0x003fb668 2064756d 6d795f69 73434552 29000000 dummy_isCER)...\n- 0x003fb678 63657200 20776974 6820756e 6b6e6f77 cer. with unknow\n- 0x003fb688 6e206b65 79207479 70652027 00000000 n key type '....\n- 0x003fb698 2720696e 204d4954 32207461 673a2000 ' in MIT2 tag: .\n- 0x003fb6a8 4e6f7465 3d000000 4d495241 00000000 Note=...MIRA....\n- 0x003fb6b8 54727969 6e672074 6f206c6f 61642053 Trying to load S\n- 0x003fb6c8 43462066 726f6d20 756e6974 69616c69 CF from unitiali\n- 0x003fb6d8 73656420 52656164 2e000000 766f6964 sed Read....void\n- 0x003fb6e8 20526561 643a3a63 6865636b 53434641 Read::checkSCFA\n- 0x003fb6f8 6e644c6f 61645175 616c2862 6f6f6c20 ndLoadQual(bool \n- 0x003fb708 6a757374 63686563 6b290000 5761726e justcheck)..Warn\n- 0x003fb718 696e673a 20000000 5761726e 696e673a ing: ...Warning:\n- 0x003fb728 204e756d 62657220 6f662062 61736573 Number of bases\n- 0x003fb738 20696e20 53434620 66696c65 20280000 in SCF file (..\n- 0x003fb748 2920646f 6573206e 6f742063 6f727265 ) does not corre\n- 0x003fb758 73706f6e 6420746f 20746865 206e756d spond to the num\n- 0x003fb768 62657220 6f662062 61736573 20657870 ber of bases exp\n- 0x003fb778 65637465 6420696e 20746865 20726561 ected in the rea\n- 0x003fb788 64202872 65616420 66726f6d 20666173 d (read from fas\n- 0x003fb798 74612c20 6578702c 20706864 206f7220 ta, exp, phd or \n- 0x003fb7a8 63616620 66696c65 292e0a52 65616420 caf file)..Read \n- 0x003fb7b8 77696c6c 205f6e6f 745f2062 65207573 will _not_ be us\n- 0x003fb7c8 65642069 6e206173 73656d62 6c792100 ed in assembly!.\n- 0x003fb7d8 5761726e 696e673a 20412062 61736520 Warning: A base \n- 0x003fb7e8 28000000 2920696e 20746865 20534346 (...) in the SCF\n- 0x003fb7f8 20280000 2920646f 6573206e 6f742063 (..) does not c\n- 0x003fb808 6f727265 73706f6e 6420746f 20746865 orrespond to the\n- 0x003fb818 20746865 206f6e65 20280000 2920696e the one (..) in\n- 0x003fb828 20746865 20726561 64207265 61642066 the read read f\n- 0x003fb838 726f6d20 66617374 612c2065 78702c20 rom fasta, exp, \n- 0x003fb848 70686420 6f722063 61662028 706f7369 phd or caf (posi\n- 0x003fb858 74696f6e 3a200000 4e6f2073 63666e61 tion: ..No scfna\n- 0x003fb868 6d652067 6976656e 3f000000 766f6964 me given?...void\n- 0x003fb878 20526561 643a3a6c 6f616444 61746146 Read::loadDataF\n- 0x003fb888 726f6d53 43462863 6f6e7374 20737464 romSCF(const std\n- 0x003fb898 3a3a7374 72696e67 20262073 63666e61 ::string & scfna\n- 0x003fb8a8 6d652900 4e6f2073 63662064 61746120 me).No scf data \n- 0x003fb8b8 61766169 6c61626c 6520666f 72200000 available for ..\n- 0x003fb8c8 556e6578 70656374 65642065 72726f72 Unexpected error\n- 0x003fb8d8 20776865 72652069 74207368 6f756c64 where it should\n- 0x003fb8e8 206e6f74 20686170 70656e3a 20000000 not happen: ...\n- 0x003fb8f8 41742062 61736520 706f7369 74696f6e At base position\n- 0x003fb908 20000000 3a206261 73652000 20756e6b ...: base . unk\n- 0x003fb918 6e6f776e 20495550 41432063 6f64653f nown IUPAC code?\n- 0x003fb928 0a000000 54686520 65787065 72696d65 ....The experime\n- 0x003fb938 6e742068 6173206e 6f206e61 6d652028 nt has no name (\n- 0x003fb948 6e6f2049 44206669 656c6420 666f756e no ID field foun\n- 0x003fb958 64293a20 00000000 766f6964 20526561 d): ....void Rea\n- 0x003fb968 643a3a6c 6f616444 61746146 726f6d45 d::loadDataFromE\n- 0x003fb978 58502829 00000000 4e6f2062 61736573 XP()....No bases\n- 0x003fb988 20776572 6520666f 756e643a 20000000 were found: ...\n- 0x003fb998 5761726e 696e6720 696e3a20 00000000 Warning in: ....\n- 0x003fb9a8 5741524e 494e473a 20000000 20202068 WARNING: ... h\n- 0x003fb9b8 6173206e 6f206261 73657320 696e2074 as no bases in t\n- 0x003fb9c8 68652065 78706572 696d656e 74206669 he experiment fi\n- 0x003fb9d8 6c653f00 53657175 656e6365 206c656e le?.Sequence len\n- 0x003fb9e8 6774683a 20000000 4e756d62 6572206f gth: ...Number o\n- 0x003fb9f8 66207175 616c6974 79207661 6c756573 f quality values\n- 0x003fba08 3a200000 54686520 65787065 72696d65 : ..The experime\n- 0x003fba18 6e742068 61732061 6e20756e 65717561 nt has an unequa\n- 0x003fba28 6c206e75 6d626572 206f6620 62617365 l number of base\n- 0x003fba38 7320616e 64207175 616c6974 79207661 s and quality va\n- 0x003fba48 6c756573 20285351 20767320 41562066 lues (SQ vs AV f\n- 0x003fba58 69656c64 73293a20 00000000 74686572 ields): ....ther\n- 0x003fba68 65207368 6f756c64 20626520 61206576 e should be a ev\n- 0x003fba78 656e206e 756d6265 72206f66 204f4e20 en number of ON \n- 0x003fba88 61646a75 73746d65 6e74733a 20000000 adjustments: ...\n- 0x003fba98 74686520 61646a75 73746d65 6e747320 the adjustments \n- 0x003fbaa8 67697665 6e20696e 20746865 204f4e20 given in the ON \n- 0x003fbab8 74616720 65786365 65642074 68652073 tag exceed the s\n- 0x003fbac8 697a6520 6f662074 68652073 65717565 ize of the seque\n- 0x003fbad8 6e63653a 20000000 6e61693a 20000000 nce: ...nai: ...\n- 0x003fbae8 20206e65 7761646a 7573746d 656e7473 newadjustments\n- 0x003fbaf8 2e73697a 6528293a 20000000 74686520 .size(): ...the \n- 0x003fbb08 61646a75 73746d65 6e747320 67697665 adjustments give\n- 0x003fbb18 6e20696e 20746865 204f4e20 74616720 n in the ON tag \n- 0x003fbb28 646f206e 6f742063 6f766572 20746865 do not cover the\n- 0x003fbb38 2077686f 6c652072 616e6765 206f6620 whole range of \n- 0x003fbb48 73657175 656e6365 3a200000 3d2b2d00 sequence: ..=+-.\n- 0x003fbb58 4f6f6f6f 70732c20 64656c65 74656420 Oooops, deleted \n- 0x003fbb68 65766572 79746869 6e673f00 626f6f6c everything?.bool\n- 0x003fbb78 20436f6e 7469673a 3a746374 725f6865 Contig::tctr_he\n- 0x003fbb88 6c706572 31287569 6e743332 2066726f lper1(uint32 fro\n- 0x003fbb98 6d706f73 2c207569 6e743332 20746f70 mpos, uint32 top\n- 0x003fbba8 6f732c20 626f6f6c 2073696d 756c6174 os, bool simulat\n- 0x003fbbb8 656f6e6c 79290000 72656164 706f7320 eonly)..readpos \n- 0x003fbbc8 00000000 203e3d20 00000000 206e6f74 .... >= .... not\n- 0x003fbbd8 20696e20 72656164 20000000 766f6964 in read ...void\n- 0x003fbbe8 20436f6e 7469673a 3a636865 636b466f Contig::checkFo\n- 0x003fbbf8 724c6f63 6b656442 61736528 636f6e73 rLockedBase(cons\n- 0x003fbc08 74207569 6e743332 20726561 64706f73 t uint32 readpos\n- 0x003fbc18 2c20506c 61636564 436f6e74 69675265 , PlacedContigRe\n- 0x003fbc28 6164733a 3a636f6e 73745f69 74657261 ads::const_itera\n- 0x003fbc38 746f7220 70637249 2c20696e 74333220 tor pcrI, int32 \n- 0x003fbc48 26206261 73656c6f 636b2c20 696e7433 & baselock, int3\n- 0x003fbc58 32202620 736e706c 6f636b29 00000000 2 & snplock)....\n- 0x003fbc68 6e656564 20726564 6f206361 3120666f need redo ca1 fo\n- 0x003fbc78 7220506c 61636564 436f6e74 69675265 r PlacedContigRe\n- 0x003fbc88 61647300 766f6964 20436f6e 7469673a ads.void Contig:\n- 0x003fbc98 3a616c6c 6f776564 52656649 44735f61 :allowedRefIDs_a\n- 0x003fbca8 6c6c6f77 536f6d65 5261696c 734f6e53 llowSomeRailsOnS\n- 0x003fbcb8 686f7274 52656164 436f7665 72616765 hortReadCoverage\n- 0x003fbcc8 28696e74 33322062 656c6f77 636f7665 (int32 belowcove\n- 0x003fbcd8 72616765 2c20696e 74333220 73747261 rage, int32 stra\n- 0x003fbce8 696e6964 2c207569 6e743820 73657174 inid, uint8 seqt\n- 0x003fbcf8 79706529 00000000 54616720 6661696c ype)....Tag fail\n- 0x003fbd08 65643f21 3f0a0000 54797065 20414249 ed?!?...Type ABI\n- 0x003fbd18 20534f4c 6944206e 65656473 206d6f72 SOLiD needs mor\n- 0x003fbd28 65207375 70706f72 74203131 2e000000 e support 11....\n- 0x003fbd38 766f6964 20436f6e 7469673a 3a6e6d70 void Contig::nmp\n- 0x003fbd48 725f6576 616c7561 74654f6e 65536571 r_evaluateOneSeq\n- 0x003fbd58 54797065 28636f6e 73742065 72636369 Type(const ercci\n- 0x003fbd68 5f742026 20657263 63692c20 7374643a _t & ercci, std:\n- 0x003fbd78 3a766563 746f723c 7374643a 3a766563 :vector \n- 0x003fbd98 3e202620 67726f75 70735f73 742c206e > & groups_st, n\n- 0x003fbda8 6e706f73 5f726570 5f636f6c 5f742026 npos_rep_col_t &\n- 0x003fbdb8 206e6577 70726329 00000000 54797065 newprc)....Type\n- 0x003fbdc8 20414249 20534f4c 6944206e 65656473 ABI SOLiD needs\n- 0x003fbdd8 206d6f72 65207375 70706f72 74203130 more support 10\n- 0x003fbde8 2e000000 766f6964 20436f6e 7469673a ....void Contig:\n- 0x003fbdf8 3a6e6d70 725f6361 7574696f 75734d75 :nmpr_cautiousMu\n- 0x003fbe08 6c746953 65715479 70655461 6767696e ltiSeqTypeTaggin\n- 0x003fbe18 6728636f 6e737420 65726363 695f7420 g(const ercci_t \n- 0x003fbe28 26206572 6363692c 20636f6e 73742073 & ercci, const s\n- 0x003fbe38 74643a3a 76656374 6f723c73 74643a3a td::vector >\n- 0x003fbe68 203e2026 2067726f 7570735f 73745f73 > & groups_st_s\n- 0x003fbe78 742c2063 6f6e7374 206e6e70 6f735f72 t, const nnpos_r\n- 0x003fbe88 65705f63 6f6c5f74 20262065 6d707479 ep_col_t & empty\n- 0x003fbe98 7072632c 20737464 3a3a7665 63746f72 prc, std::vector\n- 0x003fbea8 3c626f6f 6c3e2026 20726561 64736d61 & readsma\n- 0x003fbeb8 726b6564 73726d29 00000000 4c6f6f6b rkedsrm)....Look\n- 0x003fbec8 696e6720 666f7220 62657374 2053524d ing for best SRM\n- 0x003fbed8 20667265 65207261 6e676520 696e2063 free range in c\n- 0x003fbee8 6f6e7469 67200000 4f6f6f70 7320666f ontig ..Ooops fo\n- 0x003fbef8 72206120 7461673f 0a000000 61693a20 r a tag?....ai: \n- 0x003fbf08 00000000 0a634166 3a200000 09634172 .....cAf: ...cAr\n- 0x003fbf18 3a200000 0a634366 3a200000 09634372 : ...cCf: ...cCr\n- 0x003fbf28 3a200000 0a634766 3a200000 09634772 : ...cGf: ...cGr\n- 0x003fbf38 3a200000 0a635466 3a200000 09635472 : ...cTf: ...cTr\n- 0x003fbf48 3a200000 0a632a66 3a200000 09632a72 : ...c*f: ...c*r\n- 0x003fbf58 3a200000 0a637465 2e66726f 6d200000 : ...cte.from ..\n- 0x003fbf68 3c30207c 7c206374 652e746f 20000000 <0 || cte.to ...\n- 0x003fbf78 203e3d43 4f4e5f63 6f756e74 732e7369 >=CON_counts.si\n- 0x003fbf88 7a652829 20000000 766f6964 20436f6e ze() ...void Con\n- 0x003fbf98 7469673a 3a66696e 64426573 744e6f6e tig::findBestNon\n- 0x003fbfa8 4d697361 7373656d 626c6564 52616e67 MisassembledRang\n- 0x003fbfb8 65282900 52616e67 65200000 4c617267 e().Range ..Larg\n- 0x003fbfc8 65737420 4f4b3a20 00000000 46756c6c est OK: ....Full\n- 0x003fbfd8 20636f6e 74696720 4f4b2e0a 00000000 contig OK......\n- 0x003fbfe8 766f6964 20436f6e 7469673a 3a747269 void Contig::tri\n- 0x003fbff8 6d436f6e 74696754 6f52616e 67652875 mContigToRange(u\n- 0x003fc008 696e7433 32206672 6f6d706f 732c2075 int32 frompos, u\n- 0x003fc018 696e7433 3220746f 706f7329 00000000 int32 topos)....\n- 0x003fc028 626f6f6c 20436f6e 7469673a 3a616e61 bool Contig::ana\n- 0x003fc038 6c797365 524d425a 6f6e6573 28506c61 lyseRMBZones(Pla\n- 0x003fc048 63656443 6f6e7469 67526561 64733a3a cedContigReads::\n- 0x003fc058 636f6e73 745f6974 65726174 6f722070 const_iterator p\n- 0x003fc068 63724929 00000000 6d617863 6f767065 crI)....maxcovpe\n- 0x003fc078 72726561 642e7369 7a652829 20213d20 rread.size() != \n- 0x003fc088 434f4e5f 72656164 706f6f6c 2d3e7369 CON_readpool->si\n- 0x003fc098 7a652829 203f3f3f 00000000 766f6964 ze() ???....void\n- 0x003fc0a8 20436f6e 7469673a 3a616e61 6c797365 Contig::analyse\n- 0x003fc0b8 52656164 436f7665 72616765 28737464 ReadCoverage(std\n- 0x003fc0c8 3a3a7665 63746f72 3c75696e 7433323e ::vector\n- 0x003fc0d8 2026206d 6178636f 76290000 46636f6e & maxcov)..Fcon\n- 0x003fc0e8 00000000 656e6472 6561646d 61726b65 ....endreadmarke\n- 0x003fc0f8 78636c75 73696f6e 61726561 206d6179 xclusionarea may\n- 0x003fc108 206e6f74 20626520 3c203100 766f6964 not be < 1.void\n- 0x003fc118 20436f6e 7469673a 3a6e6d70 725f6669 Contig::nmpr_fi\n- 0x003fc128 72737466 696c6c69 6e28636f 6e737420 rstfillin(const \n- 0x003fc138 65726363 695f7420 26206572 6363692c ercci_t & ercci,\n- 0x003fc148 20636f6e 73742073 74643a3a 76656374 const std::vect\n- 0x003fc158 6f723c69 6e74383e 2026206d 61736b73 or & masks\n- 0x003fc168 6861646f 77290000 54797065 20414249 hadow)..Type ABI\n- 0x003fc178 20534f4c 6944206e 65656473 206d6f72 SOLiD needs mor\n- 0x003fc188 65207375 70706f72 74203132 612e0000 e support 12a...\n- 0x003fc198 54797065 20414249 20534f4c 6944206e Type ABI SOLiD n\n- 0x003fc1a8 65656473 206d6f72 65207375 70706f72 eeds more suppor\n- 0x003fc1b8 74203134 2e000000 54797065 20414249 t 14....Type ABI\n- 0x003fc1c8 20534f4c 6944206e 65656473 206d6f72 SOLiD needs mor\n- 0x003fc1d8 65207375 70706f72 74203132 622e0000 e support 12b...\n- 0x003fc1e8 766f6964 20436f6e 7469673a 3a6e6d70 void Contig::nmp\n- 0x003fc1f8 725f7261 74656772 6f757073 28737464 r_rategroups(std\n- 0x003fc208 3a3a7665 63746f72 3c737464 3a3a7665 ::vector > > & groups_s\n- 0x003fc248 745f7374 2c206363 636f6e74 61696e65 t_st, cccontaine\n- 0x003fc258 725f743a 3a636f6e 73745f69 74657261 r_t::const_itera\n- 0x003fc268 746f7220 63634929 00000000 54797065 tor ccI)....Type\n- 0x003fc278 20414249 20534f4c 6944206e 65656473 ABI SOLiD needs\n- 0x003fc288 206d6f72 65207375 70706f72 74203132 more support 12\n- 0x003fc298 632e0000 434f4e5f 72656164 706f6f6c c...CON_readpool\n- 0x003fc2a8 2d3e7369 7a652829 3d3d3020 3f3f3f00 ->size()==0 ???.\n- 0x003fc2b8 766f6964 20436f6e 7469673a 3a6e6577 void Contig::new\n- 0x003fc2c8 4d61726b 506f7373 69626c65 52657065 MarkPossibleRepe\n- 0x003fc2d8 61747328 636f6e73 74207569 6e743332 ats(const uint32\n- 0x003fc2e8 206e756d 73747261 696e7329 00000000 numstrains)....\n- 0x003fc2f8 41434754 2a000000 65686868 68686868 ACGT*...ehhhhhhh\n- 0x003fc308 202e2e2e 2e203f0a 00000000 6e6f2073 .... ?.....no s\n- 0x003fc318 65712074 79706520 77697468 2076616c eq type with val\n- 0x003fc328 69642067 726f7570 73206174 20746869 id groups at thi\n- 0x003fc338 7320706c 6163653f 20496d70 6f737369 s place? Impossi\n- 0x003fc348 626c652e 00000000 53656172 6368696e ble.....Searchin\n- 0x003fc358 6720666f 723a2000 53524f73 20000000 g for: .SROs ...\n- 0x003fc368 554e5373 20000000 49555041 43730000 UNSs ...IUPACs..\n- 0x003fc378 2c207072 65706172 696e6720 6e656564 , preparing need\n- 0x003fc388 65642064 6174613a 20736f72 74696e67 ed data: sorting\n- 0x003fc398 20746167 73202e2e 2e200000 646f6e65 tags ... ..done\n- 0x003fc3a8 00000000 66657463 68696e67 20636f6e ....fetching con\n- 0x003fc3b8 73656e73 75732066 6f722073 74726169 sensus for strai\n- 0x003fc3c8 6e000000 28737472 61696e20 00000000 n...(strain ....\n- 0x003fc3d8 20656d70 74792e29 202e2e2e 00000000 empty.) .......\n- 0x003fc3e8 646f6e65 2e0a5374 61727469 6e672073 done..Starting s\n- 0x003fc3f8 65617263 683a0000 53747261 696e2027 earch:..Strain '\n- 0x003fc408 00000000 273a2000 4c6f7720 636f6e66 ....': .Low conf\n- 0x003fc418 6964656e 63652062 61736520 64656669 idence base defi\n- 0x003fc428 6e697469 6f6e2000 48696768 20636f6e nition .High con\n- 0x003fc438 66696465 6e636520 00000000 4c6f7720 fidence ....Low \n- 0x003fc448 636f6e66 6964656e 63652000 4d656469 confidence .Medi\n- 0x003fc458 756d2063 6f6e6669 64656e63 65200000 um confidence ..\n- 0x003fc468 76617269 616e7420 62657477 65656e20 variant between \n- 0x003fc478 27000000 2720616e 64202700 646f6e65 '...' and '.done\n- 0x003fc488 20776974 68207365 61726368 00000000 with search....\n- 0x003fc498 76656374 6f723a3a 5f4d5f72 616e6765 vector::_M_range\n- 0x003fc4a8 5f696e73 65727400 4f6f6f6f 6f70733f _insert.Ooooops?\n- 0x003fc4b8 21206e75 6d737472 61696e73 77697468 ! numstrainswith\n- 0x003fc4c8 67726f75 70733d3d 303f0000 766f6964 groups==0?..void\n- 0x003fc4d8 20436f6e 7469673a 3a636f64 6f6e5369 Contig::codonSi\n- 0x003fc4e8 6e676c65 42617365 52657065 61744d61 ngleBaseRepeatMa\n- 0x003fc4f8 726b6572 2875696e 74333220 6d696e67 rker(uint32 ming\n- 0x003fc508 726f7570 73697a65 2c207265 70656174 roupsize, repeat\n- 0x003fc518 6d61726b 65725f73 74617473 5f742026 marker_stats_t &\n- 0x003fc528 20726570 73746174 732c2073 74643a3a repstats, std::\n- 0x003fc538 76656374 6f723c62 6f6f6c3e 20262072 vector & r\n- 0x003fc548 65616473 6d61726b 65647372 6d290000 eadsmarkedsrm)..\n- 0x003fc558 696e6c69 6e652069 6e743820 67657452 inline int8 getR\n- 0x003fc568 6561644f 52504944 41745552 44494428 eadORPIDAtURDID(\n- 0x003fc578 696e7433 32207572 64696429 20636f6e int32 urdid) con\n- 0x003fc588 73740000 696e6c69 6e652069 6e743820 st..inline int8 \n- 0x003fc598 67657452 65616444 69726563 74696f6e getReadDirection\n- 0x003fc5a8 41745552 44494428 696e7433 32207572 AtURDID(int32 ur\n- 0x003fc5b8 64696429 20636f6e 73740000 75726469 did) const..urdi\n- 0x003fc5c8 64203e3d 20504352 5f616e63 696c6c61 d >= PCR_ancilla\n- 0x003fc5d8 7279696e 666f2e73 697a6528 29203f3f ryinfo.size() ??\n- 0x003fc5e8 3f000000 76656374 6f723c62 6f6f6c3e ?...vector\n- 0x003fc5f8 3a3a5f4d 5f696e73 6572745f 61757800 ::_M_insert_aux.\n- 0x003fc608 496e7661 6c696420 2f204e6f 7420696e Invalid / Not in\n- 0x003fc618 69746961 6c697365 642e0a00 416c6967 itialised...Alig\n- 0x003fc628 6e656420 28312920 53657131 20616e64 ned (1) Seq1 and\n- 0x003fc638 20283229 20536571 32207769 74682028 (2) Seq2 with (\n- 0x003fc648 33292064 69666665 72656e63 65206d6f 3) difference mo\n- 0x003fc658 6e69746f 7220616e 64202834 2920636f nitor and (4) co\n- 0x003fc668 6e73656e 7375733a 0a000000 4e6f7420 nsensus:....Not \n- 0x003fc678 65717561 6c2e0a00 097c2020 20202e20 equal....| . \n- 0x003fc688 2020207c 20202020 2e202020 207c2020 | . | \n- 0x003fc698 20202e20 2020207c 20202020 2e202020 . | . \n- 0x003fc6a8 207c2020 20202e20 2020207c 20202020 | . | \n- 0x003fc6b8 2e202020 20000000 4944313a 00000000 . ...ID1:....\n- 0x003fc6c8 4944323a 00000000 2d090000 43090000 ID2:....-...C...\n- 0x003fc6d8 43470900 41445320 6f626a65 63742061 CG..ADS object a\n- 0x003fc6e8 70706172 656e746c 7920696e 20736176 pparently in sav\n- 0x003fc6f8 654d656d 206d6f64 652c2063 616e6e6f eMem mode, canno\n- 0x003fc708 74207368 6f772061 6c69676e 6d656e74 t show alignment\n- 0x003fc718 2e0a0000 4c656e31 3a200000 4c656e32 ....Len1: ..Len2\n- 0x003fc728 3a200000 45787065 63746564 2053636f : ..Expected Sco\n- 0x003fc738 72653a20 00000000 53636f72 653a2000 re: ....Score: .\n- 0x003fc748 57656967 68743a20 00000000 436f6e74 Weight: ....Cont\n- 0x003fc758 61696e65 643a2000 4d69736d 61746368 ained: .Mismatch\n- 0x003fc768 65733a20 00000000 47617073 3a200000 es: ....Gaps: ..\n- 0x003fc778 4d617820 636f6e74 6967756f 75732067 Max contiguous g\n- 0x003fc788 6170733a 20000000 446f6e27 74207065 aps: ...Don't pe\n- 0x003fc798 6e616c69 7365204e 2d676170 733a2000 nalise N-gaps: .\n- 0x003fc7a8 204f626a 65637420 6e6f7420 696e6974 Object not init\n- 0x003fc7b8 69616c69 7365642e 00000000 63686172 ialised.....char\n- 0x003fc7c8 202a2067 6574416c 69676e65 64536571 * getAlignedSeq\n- 0x003fc7d8 75656e63 65287265 61646964 5f742069 uence(readid_t i\n- 0x003fc7e8 64290000 20547269 65642074 6f206765 d).. Tried to ge\n- 0x003fc7f8 7420616c 69676e65 64207365 7175656e t aligned sequen\n- 0x003fc808 63657320 6f6e206f 626a6563 74207768 ces on object wh\n- 0x003fc818 65726520 73617665 4d656d28 29206861 ere saveMem() ha\n- 0x003fc828 64206265 656e2063 616c6c65 64207072 d been called pr\n- 0x003fc838 6576696f 75736c79 21000000 4944206e eviously!...ID n\n- 0x003fc848 6f742069 6e20616c 69676e6d 656e742e ot in alignment.\n- 0x003fc858 00000000 63686172 202a2067 65745365 ....char * getSe\n- 0x003fc868 7175656e 63654174 4f766572 6c617053 quenceAtOverlapS\n- 0x003fc878 74617274 28726561 6469645f 74206964 tart(readid_t id\n- 0x003fc888 29000000 75696e74 33322067 65744c65 )...uint32 getLe\n- 0x003fc898 6e4f6641 6c69676e 65645365 7175656e nOfAlignedSequen\n- 0x003fc8a8 63652872 65616469 645f7420 69642900 ce(readid_t id).\n- 0x003fc8b8 75696e74 33322041 6c69676e 65644475 uint32 AlignedDu\n- 0x003fc8c8 616c5365 713a3a63 616c6345 6e64734c alSeq::calcEndsL\n- 0x003fc8d8 656e436f 6e746967 756f7573 4d617463 enContiguousMatc\n- 0x003fc8e8 68282900 4144535f 616c6967 6e65645f h().ADS_aligned_\n- 0x003fc8f8 73657131 3d3d6e75 6c6c7074 72203f3f seq1==nullptr ??\n- 0x003fc908 3f000000 4144535f 616c6967 6e65645f ?...ADS_aligned_\n- 0x003fc918 73657132 3d3d6e75 6c6c7074 72203f3f seq2==nullptr ??\n- 0x003fc928 3f000000 766f6964 20416c69 676e6564 ?...void Aligned\n- 0x003fc938 4475616c 5365713a 3a736176 654d656d DualSeq::saveMem\n- 0x003fc948 28626f6f 6c206465 6c657465 5f736571 (bool delete_seq\n- 0x003fc958 2c20626f 6f6c2064 656c6574 655f636f , bool delete_co\n- 0x003fc968 6e737365 71290000 766f6964 20416c69 nsseq)..void Ali\n- 0x003fc978 676e6564 4475616c 5365713a 3a636c69 gnedDualSeq::cli\n- 0x003fc988 70706572 28696e74 33322077 696e6c65 pper(int32 winle\n- 0x003fc998 6e2c2069 6e743332 206e756d 6572722c n, int32 numerr,\n- 0x003fc9a8 20696e74 33322072 65747269 65732c20 int32 retries, \n- 0x003fc9b8 696e7433 32202620 72657467 6f6f646c int32 & retgoodl\n- 0x003fc9c8 656e312c 20696e74 33322026 20726574 en1, int32 & ret\n- 0x003fc9d8 676f6f64 6c656e32 2920636f 6e737400 goodlen2) const.\n- 0x003fc9e8 20547269 65642074 6f207573 65206675 Tried to use fu\n- 0x003fc9f8 6e637469 6f6e206f 6e206f62 6a656374 nction on object\n- 0x003fca08 20776865 72652073 6176654d 656d2829 where saveMem()\n- 0x003fca18 20686164 20626565 6e206361 6c6c6564 had been called\n- 0x003fca28 20707265 76696f75 736c7921 00000000 previously!....\n- 0x003fca38 77696e6c 656e203d 3d203020 3f000000 winlen == 0 ?...\n- 0x003fca48 6c656e31 3d3d3020 3f206964 313d2000 len1==0 ? id1= .\n- 0x003fca58 20696432 3d200000 766f6964 20414453 id2= ..void ADS\n- 0x003fca68 45737469 6d61746f 723a3a63 616c634e Estimator::calcN\n- 0x003fca78 65774573 74696d61 74652869 6e743332 ewEstimate(int32\n- 0x003fca88 206f6666 73657473 31746f73 322c2075 offsets1tos2, u\n- 0x003fca98 696e7433 32206c65 6e312c20 75696e74 int32 len1, uint\n- 0x003fcaa8 3332206c 656e322c 20726561 6469645f 32 len2, readid_\n- 0x003fcab8 74206964 312c2072 65616469 645f7420 t id1, readid_t \n- 0x003fcac8 6964322c 20696e74 38206964 31646972 id2, int8 id1dir\n- 0x003fcad8 2c20696e 74382069 64326469 72290000 , int8 id2dir)..\n- 0x003fcae8 6c656e32 3d3d3020 3f206964 323d2000 len2==0 ? id2= .\n- 0x003fcaf8 20696431 3d200000 736f6d65 7468696e id1= ..somethin\n- 0x003fcb08 67206973 20726561 6c6c7920 77726f6e g is really wron\n- 0x003fcb18 67207769 74682074 68617420 41445345 g with that ADSE\n- 0x003fcb28 21000000 6f666673 65747331 746f7332 !...offsets1tos2\n- 0x003fcb38 3e3d3020 2626206f 66667365 74733174 >=0 && offsets1t\n- 0x003fcb48 6f73323e 3d6c656e 31203f00 6f666673 os2>=len1 ?.offs\n- 0x003fcb58 65747331 746f7332 3c302026 26206162 ets1tos2<0 && ab\n- 0x003fcb68 73286f66 66736574 7331746f 7332293e s(offsets1tos2)>\n- 0x003fcb78 3d6c656e 32203f00 41445345 5f6f7665 =len2 ?.ADSE_ove\n- 0x003fcb88 726c6170 6c656e3e 41445345 5f746f74 rlaplen>ADSE_tot\n- 0x003fcb98 616c6c65 6e000000 536f6d65 206f7468 allen...Some oth\n- 0x003fcba8 65722072 6561736f 6e202e2e 2e000000 er reason ......\n- 0x003fcbb8 206e6f74 20696e20 41445345 7374696d not in ADSEstim\n- 0x003fcbc8 61746f72 2e0a0000 75696e74 33322041 ator....uint32 A\n- 0x003fcbd8 44534573 74696d61 746f723a 3a676574 DSEstimator::get\n- 0x003fcbe8 45737469 6d617465 644c6566 74457870 EstimatedLeftExp\n- 0x003fcbf8 616e6428 72656164 69645f74 20696429 and(readid_t id)\n- 0x003fcc08 20636f6e 73740000 75696e74 33322041 const..uint32 A\n- 0x003fcc18 44534573 74696d61 746f723a 3a676574 DSEstimator::get\n- 0x003fcc28 45737469 6d617465 64526967 68744578 EstimatedRightEx\n- 0x003fcc38 70616e64 28726561 6469645f 74206964 pand(readid_t id\n- 0x003fcc48 2920636f 6e737400 75696e74 33322041 ) const.uint32 A\n- 0x003fcc58 44534573 74696d61 746f723a 3a676574 DSEstimator::get\n- 0x003fcc68 4c656e28 72656164 69645f74 20696429 Len(readid_t id)\n- 0x003fcc78 20636f6e 73740000 696e7433 3220416c const..int32 Al\n- 0x003fcc88 69676e65 64447561 6c536571 3a3a7363 ignedDualSeq::sc\n- 0x003fcc98 6f726528 626f6f6c 20656e66 6f726365 ore(bool enforce\n- 0x003fcca8 5f636c65 616e5f65 6e64732c 20626f6f _clean_ends, boo\n- 0x003fccb8 6c20646f 6e747065 6e616c69 73656e67 l dontpenaliseng\n- 0x003fccc8 61707329 00000000 20536571 75656e63 aps).... Sequenc\n- 0x003fccd8 65206c65 6e677468 7320756e 65717561 e lengths unequa\n- 0x003fcce8 6c3a2000 2076732e 20000000 766f6964 l: . vs. ...void\n- 0x003fccf8 20416c69 676e6564 4475616c 5365713a AlignedDualSeq:\n- 0x003fcd08 3a616371 75697265 53657175 656e6365 :acquireSequence\n- 0x003fcd18 7328636f 6e737420 63686172 202a2073 s(const char * s\n- 0x003fcd28 6571312c 20636f6e 73742063 68617220 eq1, const char \n- 0x003fcd38 2a207365 71322c20 72656164 69645f74 * seq2, readid_t\n- 0x003fcd48 20696431 2c207265 61646964 5f742069 id1, readid_t i\n- 0x003fcd58 64322c20 696e7438 20696431 6469722c d2, int8 id1dir,\n- 0x003fcd68 20696e74 38206964 32646972 2c20626f int8 id2dir, bo\n- 0x003fcd78 6f6c2065 6e666f72 63655f63 6c65616e ol enforce_clean\n- 0x003fcd88 5f656e64 732c2062 6f6f6c20 646f6e74 _ends, bool dont\n- 0x003fcd98 70656e61 6c697365 6e676170 732c2069 penalisengaps, i\n- 0x003fcda8 6e743332 2062616e 64776964 74687573 nt32 bandwidthus\n- 0x003fcdb8 65642c20 696e7433 32206d69 6e62616e ed, int32 minban\n- 0x003fcdc8 64646973 74616e63 65290000 53657175 ddistance)..Sequ\n- 0x003fcdd8 656e6365 206c656e 67746873 20303f00 ence lengths 0?.\n- 0x003fcde8 416c6967 6e6d656e 74206f66 2074776f Alignment of two\n- 0x003fcdf8 20736571 75656e63 65733a20 00000000 sequences: ....\n- 0x003fce08 203e2036 35353330 20626173 65732c20 > 65530 bases, \n- 0x003fce18 63616e6e 6f742068 616e646c 652c2073 cannot handle, s\n- 0x003fce28 686f756c 646e2774 20686176 65206861 houldn't have ha\n- 0x003fce38 7070656e 65642100 696e7438 20416c69 ppened!.int8 Ali\n- 0x003fce48 676e6564 4475616c 53657146 61637473 gnedDualSeqFacts\n- 0x003fce58 3a3a6765 74536571 75656e63 65446972 ::getSequenceDir\n- 0x003fce68 65637469 6f6e2872 65616469 645f7420 ection(readid_t \n- 0x003fce78 69642920 636f6e73 74000000 44697265 id) const...Dire\n- 0x003fce88 6374696f 6e313a20 00000000 44697265 ction1: ....Dire\n- 0x003fce98 6374696f 6e323a20 00000000 44656c74 ction2: ....Delt\n- 0x003fcea8 61205365 71322074 6f205365 71313a20 a Seq2 to Seq1: \n- 0x003fceb8 00000000 49443120 72696768 74206465 ....ID1 right de\n- 0x003fcec8 6c74613a 20000000 49443220 72696768 lta: ...ID2 righ\n- 0x003fced8 74206465 6c74613a 20000000 49443120 t delta: ...ID1 \n- 0x003fcee8 35702063 6c65616e 3a200000 0a494431 5p clean: ...ID1\n- 0x003fcef8 20337020 636c6561 6e3a2000 0a494432 3p clean: ..ID2\n- 0x003fcf08 20357020 636c6561 6e3a2000 0a494432 5p clean: ..ID2\n- 0x003fcf18 20337020 636c6561 6e3a2000 4f766572 3p clean: .Over\n- 0x003fcf28 6c617020 6c656e67 74683a20 00000000 lap length: ....\n- 0x003fcf38 546f7461 6c206c65 6e677468 3a200000 Total length: ..\n- 0x003fcf48 53636f72 65207261 74696f3a 20000000 Score ratio: ...\n- 0x003fcf58 75696e74 33322041 44533a3a 6765744f uint32 ADS::getO\n- 0x003fcf68 74686572 49442875 72656164 69645f74 therID(ureadid_t\n- 0x003fcf78 20696429 00000000 75696e74 33322041 id)....uint32 A\n- 0x003fcf88 6c69676e 65644475 616c5365 71466163 lignedDualSeqFac\n- 0x003fcf98 74733a3a 6765744f 66667365 74496e41 ts::getOffsetInA\n- 0x003fcfa8 6c69676e 6d656e74 28726561 6469645f lignment(readid_\n- 0x003fcfb8 74206964 2920636f 6e737400 75696e74 t id) const.uint\n- 0x003fcfc8 33322041 44533a3a 6765744f 66667365 32 ADS::getOffse\n- 0x003fcfd8 74496e41 6c69676e 6d656e74 28726561 tInAlignment(rea\n- 0x003fcfe8 6469645f 74206964 29000000 49442000 did_t id)...ID .\n- 0x003fcff8 206e6f74 20696e20 616c6967 6e6d656e not in alignmen\n- 0x003fd008 742e0000 75696e74 31362041 6c69676e t...uint16 Align\n- 0x003fd018 65644475 616c5365 71466163 74733a3a edDualSeqFacts::\n- 0x003fd028 67657452 69676874 44656c74 61287265 getRightDelta(re\n- 0x003fd038 61646964 5f742069 64292063 6f6e7374 adid_t id) const\n- 0x003fd048 00000000 414c5f76 616c6964 206e6f74 ....AL_valid not\n- 0x003fd058 2076616c 69643f21 0a000000 416c6967 valid?!....Alig\n- 0x003fd068 6e0a2d2d 2d2d2d2d 00000000 0a414c5f n.------.....AL_\n- 0x003fd078 6964313a 20000000 0a414c5f 6964323a id1: ....AL_id2:\n- 0x003fd088 20000000 0a414c5f 69643164 69723a20 ....AL_id1dir: \n- 0x003fd098 00000000 0a414c5f 69643264 69723a20 .....AL_id2dir: \n- 0x003fd0a8 00000000 416c6967 6e207469 6d696e67 ....Align timing\n- 0x003fd0b8 2044594e 20736571 63707920 3a200000 DYN seqcpy : ..\n- 0x003fd0c8 416c6967 6e207469 6d696e67 2044594e Align timing DYN\n- 0x003fd0d8 20627377 20737520 3a200000 416c6967 bsw su : ..Alig\n- 0x003fd0e8 6e207469 6d696e67 2044594e 20627377 n timing DYN bsw\n- 0x003fd0f8 20703120 3a200000 416c6967 6e207469 p1 : ..Align ti\n- 0x003fd108 6d696e67 2044594e 20627377 20703261 ming DYN bsw p2a\n- 0x003fd118 3a200000 416c6967 6e207469 6d696e67 : ..Align timing\n- 0x003fd128 2044594e 20627377 20703262 3a200000 DYN bsw p2b: ..\n- 0x003fd138 416c6967 6e207469 6d696e67 2044594e Align timing DYN\n- 0x003fd148 20627377 20703320 3a200000 416c6967 bsw p3 : ..Alig\n- 0x003fd158 6e207469 6d696e67 2044594e 20627377 n timing DYN bsw\n- 0x003fd168 20636220 3a200000 416c6967 6e207469 cb : ..Align ti\n- 0x003fd178 6d696e67 2044594e 20627377 20202020 ming DYN bsw \n- 0x003fd188 3a200000 416c6967 6e207469 6d696e67 : ..Align timing\n- 0x003fd198 20414c20 61637175 20732020 3a200000 AL acqu s : ..\n- 0x003fd1a8 416c6967 6e207469 6d696e67 20414c20 Align timing AL \n- 0x003fd1b8 66756c6c 20202020 3a200000 416c6967 full : ..Alig\n- 0x003fd1c8 6e207469 6d696e67 20414c20 70726570 n timing AL prep\n- 0x003fd1d8 20202020 3a200000 416c6967 6e207469 : ..Align ti\n- 0x003fd1e8 6d696e67 20414c20 72616c69 676e7420 ming AL ralignt \n- 0x003fd1f8 3a200000 416c6967 6e207469 6d696e67 : ..Align timing\n- 0x003fd208 20414c20 72616c69 676e6320 3a200000 AL ralignc : ..\n- 0x003fd218 416c6967 6e207469 6d696e67 20414c20 Align timing AL \n- 0x003fd228 61647320 61202020 3a200000 416c6967 ads a : ..Alig\n- 0x003fd238 6e207469 6d696e67 20414c20 61647320 n timing AL ads \n- 0x003fd248 73202020 3a200000 3a205072 6f677261 s : ..: Progra\n- 0x003fd258 6d6d696e 67206572 726f722e 20547269 mming error. Tri\n- 0x003fd268 65642074 6f20616c 69676e20 77697468 ed to align with\n- 0x003fd278 6f757420 70726f70 65722069 6e697469 out proper initi\n- 0x003fd288 616c6973 6174696f 6e206f66 20416c69 alisation of Ali\n- 0x003fd298 676e2d6f 626a6563 742e0000 766f6964 gn-object...void\n- 0x003fd2a8 20416c69 676e3a3a 70726570 61726541 Align::prepareA\n- 0x003fd2b8 6c69676e 28737464 3a3a6c69 73743c41 lign(std::list *\n- 0x003fd2d8 20616473 6c697374 29000000 76733149 adslist)...vs1I\n- 0x003fd2e8 213d414c 5f726c65 76312e63 656e6428 !=AL_rlev1.cend(\n- 0x003fd2f8 29000000 766f6964 20416c69 676e3a3a )...void Align::\n- 0x003fd308 72615f65 7870616e 64524c45 416c6967 ra_expandRLEAlig\n- 0x003fd318 6e6d656e 74732863 6f6e7374 20636861 nments(const cha\n- 0x003fd328 72202a20 73312c20 636f6e73 74206368 r * s1, const ch\n- 0x003fd338 6172202a 2073322c 20626f6f 6c207368 ar * s2, bool sh\n- 0x003fd348 616b6564 69727374 646c6566 74290000 akedirstdleft)..\n- 0x003fd358 76733249 213d414c 5f726c65 76322e63 vs2I!=AL_rlev2.c\n- 0x003fd368 656e6428 29000000 616c6c65 6e3a3a20 end()...allen:: \n- 0x003fd378 00000000 3a20464f 4f4f4f4f 4f212e00 ....: FOOOOOO!..\n- 0x003fd388 766f6964 20416c69 676e3a3a 72416c69 void Align::rAli\n- 0x003fd398 676e2875 696e7433 32206972 6f772c20 gn(uint32 irow, \n- 0x003fd3a8 75696e74 3332206a 636f6c2c 20636861 uint32 jcol, cha\n- 0x003fd3b8 72206c61 73746469 722c2062 6f6f6c20 r lastdir, bool \n- 0x003fd3c8 6861646e 29000000 6c656674 20414c5f hadn)...left AL_\n- 0x003fd3d8 6d696e62 616e6464 69737461 6e636520 minbanddistance \n- 0x003fd3e8 00000000 203c2030 203f3f3f 0a69726f .... < 0 ???.iro\n- 0x003fd3f8 773a2000 206a636f 6c3a2000 206c6278 w: . jcol: . lbx\n- 0x003fd408 3a200000 72696768 7420414c 5f6d696e : ..right AL_min\n- 0x003fd418 62616e64 64697374 616e6365 20000000 banddistance ...\n- 0x003fd428 20726278 3a200000 46756c6c 20616c69 rbx: ..Full ali\n- 0x003fd438 676e2066 61696c65 64210000 0a656e66 gn failed!...enf\n- 0x003fd448 6f726365 5f636c65 616e5f65 6e64733a orce_clean_ends:\n- 0x003fd458 20000000 0a646f6e 7470656e 616c6973 ....dontpenalis\n- 0x003fd468 656e6761 70733a20 00000000 766f6964 engaps: ....void\n- 0x003fd478 20416c69 676e3a3a 66756c6c 416c6967 Align::fullAlig\n- 0x003fd488 6e287374 643a3a6c 6973743c 416c6967 n(std::list * ad\n- 0x003fd4a8 736c6973 742c2062 6f6f6c20 656e666f slist, bool enfo\n- 0x003fd4b8 7263655f 636c6561 6e5f656e 64732c20 rce_clean_ends, \n- 0x003fd4c8 626f6f6c 20646f6e 7470656e 616c6973 bool dontpenalis\n- 0x003fd4d8 656e6761 70732900 35416c69 676e0000 engaps).5Align..\n- 0x003fd4e8 09286578 63656c6c 656e7429 00000000 .(excellent)....\n- 0x003fd4f8 0928796f 75206d69 67687420 77616e74 .(you might want\n- 0x003fd508 20746f20 63686563 6b207468 65736529 to check these)\n- 0x003fd518 00000000 6373652e 69736c61 72676563 ....cse.islargec\n- 0x003fd528 6f6e7469 673d3d30 203f3f3f 00000000 ontig==0 ???....\n- 0x003fd538 75696e74 33322041 7373656d 626c7949 uint32 AssemblyI\n- 0x003fd548 6e666f3a 3a68756e 74466f72 536d696c nfo::huntForSmil\n- 0x003fd558 65436f76 65726167 65287374 643a3a73 eCoverage(std::s\n- 0x003fd568 7472696e 67202620 7761726e 74657874 tring & warntext\n- 0x003fd578 29000000 2d200000 20636f6e 74696728 )...- .. contig(\n- 0x003fd588 73292077 69746820 6120746f 74616c20 s) with a total \n- 0x003fd598 6f662000 20626173 65732028 3d200000 of . bases (= ..\n- 0x003fd5a8 25206f66 20626173 65732069 6e20616c % of bases in al\n- 0x003fd5b8 6c206e6f 6e2d7265 70657469 74697665 l non-repetitive\n- 0x003fd5c8 206c6172 67652063 6f6e7469 67732920 large contigs) \n- 0x003fd5d8 68617665 20616e20 61766572 61676520 have an average \n- 0x003fd5e8 636f7665 72616765 206c6573 73207468 coverage less th\n- 0x003fd5f8 616e2037 3525206f 66207468 65206176 an 75% of the av\n- 0x003fd608 65726167 6520636f 76657261 6765206f erage coverage o\n- 0x003fd618 6620616c 6c206e6f 6e2d7265 70657469 f all non-repeti\n- 0x003fd628 74697665 206c6172 67652063 6f6e7469 tive large conti\n- 0x003fd638 67732e0a 00000000 25206f66 20626173 gs......% of bas\n- 0x003fd648 65732069 6e20616c 6c206e6f 6e2d7265 es in all non-re\n- 0x003fd658 70657469 74697665 20636f6e 74696773 petitive contigs\n- 0x003fd668 29206861 76652061 6e206176 65726167 ) have an averag\n- 0x003fd678 6520636f 76657261 6765206d 6f726520 e coverage more \n- 0x003fd688 7468616e 20313235 25206f66 20746865 than 125% of the\n- 0x003fd698 20617665 72616765 20636f76 65726167 average coverag\n- 0x003fd6a8 65206f66 20616c6c 206e6f6e 2d726570 e of all non-rep\n- 0x003fd6b8 65746974 69766520 6c617267 6520636f etitive large co\n- 0x003fd6c8 6e746967 732e0a00 25206f66 20626173 ntigs...% of bas\n- 0x003fd6d8 65732069 6e20616c 6c206e6f 6e2d7265 es in all non-re\n- 0x003fd6e8 70657469 74697665 20636f6e 74696773 petitive contigs\n- 0x003fd6f8 29206861 76652061 6e206176 65726167 ) have an averag\n- 0x003fd708 6520636f 76657261 67652032 35252061 e coverage 25% a\n- 0x003fd718 626f7665 206f7220 62656c6f 77207468 bove or below th\n- 0x003fd728 65206176 65726167 6520636f 76657261 e average covera\n- 0x003fd738 6765206f 6620616c 6c206e6f 6e2d7265 ge of all non-re\n- 0x003fd748 70657469 74697665 206c6172 67652063 petitive large c\n- 0x003fd758 6f6e7469 67732e0a 00000000 53756d6d ontigs......Summ\n- 0x003fd768 6172793a 20666f75 6e642000 20696e64 ary: found . ind\n- 0x003fd778 69636174 6f722873 2920666f 7220636f icator(s) for co\n- 0x003fd788 76657261 67652070 726f626c 656d2873 verage problem(s\n- 0x003fd798 292e0a0a 49662074 68652044 4e412079 )...If the DNA y\n- 0x003fd7a8 6f752061 72652061 7373656d 626c696e ou are assemblin\n- 0x003fd7b8 67206973 20626163 74657269 616c2c20 g is bacterial, \n- 0x003fd7c8 74686973 20636f75 6c642069 6e646963 this could indic\n- 0x003fd7d8 61746520 74686174 20796f75 2073616d ate that you sam\n- 0x003fd7e8 706c6564 20616e64 20736571 75656e63 pled and sequenc\n- 0x003fd7f8 65642044 4e412066 726f6d20 6578706f ed DNA from expo\n- 0x003fd808 6e656e74 69616c20 6f72206c 61746520 nential or late \n- 0x003fd818 6578706f 6e656e74 69616c20 70686173 exponential phas\n- 0x003fd828 65206f66 20612062 61637465 7269616c e of a bacterial\n- 0x003fd838 20706f70 756c6174 696f6e2e 20546869 population. Thi\n- 0x003fd848 73206c65 61647320 746f2061 20636f76 s leads to a cov\n- 0x003fd858 65726167 65206269 61732074 6f776172 erage bias towar\n- 0x003fd868 64207468 65206f72 6967696e 206f6620 d the origin of \n- 0x003fd878 7265706c 69636174 696f6e2c 2068656e replication, hen\n- 0x003fd888 63652066 616c7365 20706f73 69746976 ce false positiv\n- 0x003fd898 65206465 74656374 696f6e20 6f662072 e detection of r\n- 0x003fd8a8 65706561 74732c20 68656e63 6520616e epeats, hence an\n- 0x003fd8b8 20617373 656d626c 79207768 69636820 assembly which \n- 0x003fd8c8 6973206d 6f726520 66726167 6d656e74 is more fragment\n- 0x003fd8d8 65642074 68616e20 69742063 6f756c64 ed than it could\n- 0x003fd8e8 20626520 6f72206d 61792068 61766520 be or may have \n- 0x003fd8f8 6d697361 7373656d 626c6965 7320696e misassemblies in\n- 0x003fd908 20726567 696f6e73 206c6f63 61746564 regions located\n- 0x003fd918 20746f77 61726420 74686520 6f70706f toward the oppo\n- 0x003fd928 73697465 206f6620 74686520 6f726967 site of the orig\n- 0x003fd938 696e206f 66207265 706c6963 6174696f in of replicatio\n- 0x003fd948 6e2e0a4f 6e6c7920 61766169 6c61626c n..Only availabl\n- 0x003fd958 6520636f 756e7465 726d6561 73757265 e countermeasure\n- 0x003fd968 3a20666f 7220796f 7572206e 65787420 : for your next \n- 0x003fd978 73657175 656e6369 6e672070 726f6a65 sequencing proje\n- 0x003fd988 63742c20 646f206e 6f742073 616d706c ct, do not sampl\n- 0x003fd998 6520696e 20657870 6f6e656e 7469616c e in exponential\n- 0x003fd9a8 20706861 73652062 75742073 616d706c phase but sampl\n- 0x003fd9b8 6520696e 20737461 74696f6e 61727920 e in stationary \n- 0x003fd9c8 70686173 65202869 6620706f 73736962 phase (if possib\n- 0x003fd9d8 6c65292e 0a000000 496c6c65 67616c20 le).....Illegal \n- 0x003fd9e8 73657175 656e6365 20747970 653f0000 sequence type?..\n- 0x003fd9f8 766f6964 20417373 656d626c 79496e66 void AssemblyInf\n- 0x003fda08 6f3a3a73 65744c61 72676543 6f6e7469 o::setLargeConti\n- 0x003fda18 67436f76 50657253 54287569 6e743332 gCovPerST(uint32\n- 0x003fda28 20636f76 2c207569 6e743820 73657174 cov, uint8 seqt\n- 0x003fda38 79706529 00000000 41737365 6d626c79 ype)....Assembly\n- 0x003fda48 20696e66 6f726d61 74696f6e 3a0a0000 information:...\n- 0x003fda58 4d495241 20766572 73696f6e 3a200000 MIRA version: ..\n- 0x003fda68 4e756d2e 20726561 64732061 7373656d Num. reads assem\n- 0x003fda78 626c6564 3a200000 4e756d2e 2073696e bled: ..Num. sin\n- 0x003fda88 676c6574 733a2000 0a0a436f 76657261 glets: ...Covera\n- 0x003fda98 67652061 73736573 736d656e 74202863 ge assessment (c\n- 0x003fdaa8 616c6375 6c617465 64206672 6f6d2063 alculated from c\n- 0x003fdab8 6f6e7469 6773203e 3d200000 20776974 ontigs >= .. wit\n- 0x003fdac8 6820636f 76657261 6765203e 3d200000 h coverage >= ..\n- 0x003fdad8 293a0a3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ):.=============\n+ 0x003f8d48 00000000 00000000 57726f6e 67207479 ........Wrong ty\n+ 0x003f8d58 70652000 20697320 6e6f7420 6b6e6f77 pe . is not know\n+ 0x003f8d68 6e2e0000 766f6964 20526561 643a3a73 n...void Read::s\n+ 0x003f8d78 6574436f 75745479 70652875 696e7438 etCoutType(uint8\n+ 0x003f8d88 20747970 65290000 3a20756e 64656669 type)..: undefi\n+ 0x003f8d98 6e656420 74656368 6e6f6c6f 67792000 ned technology .\n+ 0x003f8da8 636f6e73 74206368 6172202a 20526561 const char * Rea\n+ 0x003f8db8 643a3a73 616e6974 79436865 636b2829 d::sanityCheck()\n+ 0x003f8dc8 20636f6e 73740000 3a207265 61642068 const..: read h\n+ 0x003f8dd8 6173206e 6f207661 6c696420 64617461 as no valid data\n+ 0x003f8de8 3f000000 5245415f 70735f64 69727479 ?...REA_ps_dirty\n+ 0x003f8df8 20616e64 20524541 5f706373 5f646972 and REA_pcs_dir\n+ 0x003f8e08 74792062 6f746820 74727565 3f000000 ty both true?...\n+ 0x003f8e18 53697a65 73206f66 20666f72 77617264 Sizes of forward\n+ 0x003f8e28 20000000 20616e64 20636f6d 706c656d ... and complem\n+ 0x003f8e38 656e7420 70616464 65642000 20646966 ent padded . dif\n+ 0x003f8e48 6665722e 00000000 3a205245 415f716c fer.....: REA_ql\n+ 0x003f8e58 20000000 203c3020 3f000000 3a205245 ... <0 ?...: RE\n+ 0x003f8e68 415f636c 20000000 3a205245 415f736c A_cl ...: REA_sl\n+ 0x003f8e78 20000000 3a205245 415f6d6c 20000000 ...: REA_ml ...\n+ 0x003f8e88 3a205245 415f6372 20000000 203e2061 : REA_cr ... > a\n+ 0x003f8e98 63746c65 6e2b3120 00000000 3a205245 ctlen+1 ....: RE\n+ 0x003f8ea8 415f7172 20000000 3a205245 415f7372 A_qr ...: REA_sr\n+ 0x003f8eb8 20000000 3a205245 415f6d72 20000000 ...: REA_mr ...\n+ 0x003f8ec8 3a205245 415f6164 6a757374 6d656e74 : REA_adjustment\n+ 0x003f8ed8 73200000 20213d20 65787065 63746564 s .. != expected\n+ 0x003f8ee8 2073697a 65200000 3a205245 415f7175 size ..: REA_qu\n+ 0x003f8ef8 616c6974 69657320 00000000 3a205245 alities ....: RE\n+ 0x003f8f08 415f6270 6f736861 73687374 61747320 A_bposhashstats \n+ 0x003f8f18 00000000 20213d20 00000000 20657870 .... != .... exp\n+ 0x003f8f28 65637465 64207369 7a652000 3a205245 ected size .: RE\n+ 0x003f8f38 415f726c 65767074 722d3e73 697a6528 A_rlevptr->size(\n+ 0x003f8f48 29200000 20213d20 6163746c 656e2000 ) .. != actlen .\n+ 0x003f8f58 3a207461 676e756d 62657220 28000000 : tagnumber (...\n+ 0x003f8f68 29203e3d 20524541 5f746167 732e7369 ) >= REA_tags.si\n+ 0x003f8f78 7a652028 00000000 636f6e73 74206d75 ze (....const mu\n+ 0x003f8f88 6c746974 61675f74 20262052 6561643a ltitag_t & Read:\n+ 0x003f8f98 3a676574 54616728 75696e74 33322074 :getTag(uint32 t\n+ 0x003f8fa8 61676e75 6d626572 2920636f 6e737400 agnumber) const.\n+ 0x003f8fb8 3a206861 76652071 75616c69 7479203c : have quality <\n+ 0x003f8fc8 30206f72 203e2031 30303f3f 3f0a0000 0 or > 100???...\n+ 0x003f8fd8 766f6964 20526561 643a3a63 6865636b void Read::check\n+ 0x003f8fe8 5175616c 69746965 73282900 3a207472 Qualities().: tr\n+ 0x003f8ff8 69656420 746f2073 65742000 20717561 ied to set . qua\n+ 0x003f9008 6c697469 65732061 6c74686f 75676820 lities although \n+ 0x003f9018 74686520 72656164 20686173 20000000 the read has ...\n+ 0x003f9028 20626173 65732e0a 00000000 766f6964 bases......void\n+ 0x003f9038 20526561 643a3a73 65745175 616c6974 Read::setQualit\n+ 0x003f9048 79287374 643a3a76 6563746f 723c6261 y(std::vector & \n+ 0x003f9068 7175616c 73290000 3a20706f 73280000 quals)..: pos(..\n+ 0x003f9078 29203e20 72656164 2073697a 65200000 ) > read size ..\n+ 0x003f9088 52656164 3a3a6861 73546167 28636f6e Read::hasTag(con\n+ 0x003f9098 7374206d 756c7469 7461675f 743a3a6d st multitag_t::m\n+ 0x003f90a8 74655f69 645f7420 6964656e 74696669 te_id_t identifi\n+ 0x003f90b8 65722c20 696e7433 3220706f 73292063 er, int32 pos) c\n+ 0x003f90c8 6f6e7374 00000000 75696e74 33322052 onst....uint32 R\n+ 0x003f90d8 6561643a 3a636f75 6e745461 67732863 ead::countTags(c\n+ 0x003f90e8 6f6e7374 206d756c 74697461 675f743a onst multitag_t:\n+ 0x003f90f8 3a6d7465 5f69645f 74206964 656e7469 :mte_id_t identi\n+ 0x003f9108 66696572 2c20696e 74333220 706f7329 fier, int32 pos)\n+ 0x003f9118 20636f6e 73740000 3a20706f 73202800 const..: pos (.\n+ 0x003f9128 29203e3d 20524541 5f717561 6c697469 ) >= REA_qualiti\n+ 0x003f9138 65732e73 697a6520 28000000 63686172 es.size (...char\n+ 0x003f9148 20526561 643a3a67 65745175 616c6974 Read::getQualit\n+ 0x003f9158 79496e53 65717565 6e636528 696e7433 yInSequence(int3\n+ 0x003f9168 3220706f 73290000 63686172 20526561 2 pos)..char Rea\n+ 0x003f9178 643a3a67 65745175 616c6974 79496e43 d::getQualityInC\n+ 0x003f9188 6f6d706c 656d656e 74536571 75656e63 omplementSequenc\n+ 0x003f9198 6528696e 74333220 706f7329 00000000 e(int32 pos)....\n+ 0x003f91a8 29203e3d 20524541 5f62706f 73686173 ) >= REA_bposhas\n+ 0x003f91b8 68737461 74732e73 697a6520 28000000 hstats.size (...\n+ 0x003f91c8 62617365 666c6167 735f7420 52656164 baseflags_t Read\n+ 0x003f91d8 3a3a6765 74426173 65466c61 67732875 ::getBaseFlags(u\n+ 0x003f91e8 696e7433 3220706f 73292063 6f6e7374 int32 pos) const\n+ 0x003f91f8 00000000 72656e61 6d656c69 73742025 ....renamelist %\n+ 0x003f9208 20322021 3d20303f 3f3f0000 626f6f6c 2 != 0???..bool\n+ 0x003f9218 20526561 643a3a72 656e616d 65526561 Read::renameRea\n+ 0x003f9228 64507265 66697828 7374643a 3a737472 dPrefix(std::str\n+ 0x003f9238 696e6720 26206163 746e616d 65290000 ing & actname)..\n+ 0x003f9248 62617369 635f7374 72696e67 3a3a7375 basic_string::su\n+ 0x003f9258 62737472 00000000 25733a20 5f5f706f bstr....%s: __po\n+ 0x003f9268 73202877 68696368 20697320 257a7529 s (which is %zu)\n+ 0x003f9278 203e2074 6869732d 3e73697a 65282920 > this->size() \n+ 0x003f9288 28776869 63682069 7320257a 75290000 (which is %zu)..\n+ 0x003f9298 62617369 635f7374 72696e67 3a3a6261 basic_string::ba\n+ 0x003f92a8 7369635f 73747269 6e670000 54460000 sic_string..TF..\n+ 0x003f92b8 54520000 3a207465 6d706c61 74652061 TR..: template a\n+ 0x003f92c8 6c726561 64792073 65742074 6f200000 lready set to ..\n+ 0x003f92d8 7374643a 3a737472 696e6720 52656164 std::string Read\n+ 0x003f92e8 3a3a6361 6c635465 6d706c61 7465496e ::calcTemplateIn\n+ 0x003f92f8 666f2829 00000000 3a207465 6d706c61 fo()....: templa\n+ 0x003f9308 74652073 65676d65 6e742061 6c726561 te segment alrea\n+ 0x003f9318 64792073 65742074 6f200000 3a20756e dy set to ..: un\n+ 0x003f9328 6b6e6f77 6e207265 6164206e 616d696e known read namin\n+ 0x003f9338 67207363 68656d65 20000000 20736574 g scheme ... set\n+ 0x003f9348 3f3f3f20 52656164 47726f75 704c6962 ??? ReadGroupLib\n+ 0x003f9358 3a3a5343 48454d45 5f4e4f4e 45200000 ::SCHEME_NONE ..\n+ 0x003f9368 2e736366 00000000 3a20466f 756e6420 .scf....: Found \n+ 0x003f9378 64696769 6e6f726d 206d756c 7469706c diginorm multipl\n+ 0x003f9388 69657220 6f662030 3f000000 696e7433 ier of 0?...int3\n+ 0x003f9398 32205265 61643a3a 67657444 6967694e 2 Read::getDigiN\n+ 0x003f93a8 6f726d4d 756c7469 706c6965 72282920 ormMultiplier() \n+ 0x003f93b8 636f6e73 74000000 41726768 2120466f const...Argh! Fo\n+ 0x003f93c8 756e6420 696c6c65 67616c20 62617365 und illegal base\n+ 0x003f93d8 20000000 20616e64 20746865 72652773 ... and there's\n+ 0x003f93e8 206e6f20 636f6d70 6c656d65 6e742066 no complement f\n+ 0x003f93f8 6f722069 74210a00 496c6c65 67616c20 or it!..Illegal \n+ 0x003f9408 62617365 20696e20 61207068 61736520 base in a phase \n+ 0x003f9418 77686572 65207468 65726520 73686f75 where there shou\n+ 0x003f9428 6c642062 65206e6f 6e652e00 766f6964 ld be none..void\n+ 0x003f9438 20526561 643a3a6d 616b6543 6f6d706c Read::makeCompl\n+ 0x003f9448 656d656e 74287374 643a3a76 6563746f ement(std::vecto\n+ 0x003f9458 723c6368 61723e20 2620736f 75726365 r & source\n+ 0x003f9468 2c207374 643a3a76 6563746f 723c6368 , std::vector & destinatio\n+ 0x003f9488 6e293b00 203a2074 61672e66 726f6d20 n);. : tag.from \n+ 0x003f9498 00000000 203e3d20 6765744c 656e5365 .... >= getLenSe\n+ 0x003f94a8 71282920 00000000 766f6964 20526561 q() ....void Rea\n+ 0x003f94b8 643a3a61 64645461 67286d75 6c746974 d::addTag(multit\n+ 0x003f94c8 61675f74 20262074 61672900 203a2074 ag_t & tag). : t\n+ 0x003f94d8 61672e74 6f200000 20666f72 20746167 ag.to .. for tag\n+ 0x003f94e8 3a200000 0a746f20 28000000 29203e3d : ...to (...) >=\n+ 0x003f94f8 206c656e 206f6620 73657175 656e6365 len of sequence\n+ 0x003f9508 20280000 3a20666f 756e6420 4d494e46 (..: found MINF\n+ 0x003f9518 202f204d 49543220 74616720 7768696c / MIT2 tag whil\n+ 0x003f9528 65207365 7474696e 67207461 67732e20 e setting tags. \n+ 0x003f9538 57697468 20726561 64206772 6f757073 With read groups\n+ 0x003f9548 2c207368 6f756c64 206e6f74 20626520 , should not be \n+ 0x003f9558 616e796d 6f72652c 206d7573 74206265 anymore, must be\n+ 0x003f9568 20706172 73656420 6f757420 6265666f parsed out befo\n+ 0x003f9578 72652e00 766f6964 20526561 643a3a73 re..void Read::s\n+ 0x003f9588 65745461 67732863 6f6e7374 20737464 etTags(const std\n+ 0x003f9598 3a3a7665 63746f72 3c6d756c 74697461 ::vector & tags)....\n+ 0x003f95b8 54686973 20636861 72616374 6572206d This character m\n+ 0x003f95c8 61792070 6f736520 70726f62 6c656d73 ay pose problems\n+ 0x003f95d8 20696e20 646f776e 73747265 616d2070 in downstream p\n+ 0x003f95e8 726f6365 7373696e 67206279 206f7468 rocessing by oth\n+ 0x003f95f8 65722070 726f6772 616d732c 20697420 er programs, it \n+ 0x003f9608 69732073 75676765 73746564 20796f75 is suggested you\n+ 0x003f9618 2063686f 6f736520 746f2063 68616e67 choose to chang\n+ 0x003f9628 65207468 6174206e 616d652e 00000000 e that name.....\n+ 0x003f9638 54686973 20697320 74686520 73706163 This is the spac\n+ 0x003f9648 65206368 61726163 7465722c 206e616d e character, nam\n+ 0x003f9658 65732073 686f756c 64206e6f 7420636f es should not co\n+ 0x003f9668 6e746169 6e207468 61742100 54686973 ntain that!.This\n+ 0x003f9678 20697320 6120636f 6e74726f 6c20636f is a control co\n+ 0x003f9688 64652c20 6e616d65 73207368 6f756c64 de, names should\n+ 0x003f9698 206e6f74 20636f6e 7461696e 20746861 not contain tha\n+ 0x003f96a8 74210000 5768696c 65207472 79696e67 t!..While trying\n+ 0x003f96b8 20746f20 73657420 74686520 6e616d65 to set the name\n+ 0x003f96c8 206f6620 72656164 200a0000 0a456e63 of read ....Enc\n+ 0x003f96d8 6f756e74 65726564 20636861 72616374 ountered charact\n+ 0x003f96e8 65722077 69746820 41534349 4920636f er with ASCII co\n+ 0x003f96f8 64652000 0a497420 69732070 726f6261 de ..It is proba\n+ 0x003f9708 626c7920 64756520 746f2079 6f757220 bly due to your \n+ 0x003f9718 696e7075 74206461 74612c20 62757420 input data, but \n+ 0x003f9728 6e6f726d 616c6c79 2c204d49 52412073 normally, MIRA s\n+ 0x003f9738 686f756c 64206861 76652063 61756768 hould have caugh\n+ 0x003f9748 74207468 61742065 61726c69 65722100 t that earlier!.\n+ 0x003f9758 766f6964 20526561 643a3a73 65744e61 void Read::setNa\n+ 0x003f9768 6d652863 6f6e7374 20737464 3a3a7374 me(const std::st\n+ 0x003f9778 72696e67 2026206e 616d6529 00000000 ring & name)....\n+ 0x003f9788 5761726e 696e6720 7768696c 65207365 Warning while se\n+ 0x003f9798 7474696e 67207468 65206e61 6d65206f tting the name o\n+ 0x003f97a8 66207265 61642027 00000000 273a0a45 f read '....':.E\n+ 0x003f97b8 6e636f75 6e746572 65642063 68617261 ncountered chara\n+ 0x003f97c8 63746572 20776974 68204153 43494920 cter with ASCII \n+ 0x003f97d8 636f6465 20000000 292e0a00 0a4e616d code ...)....Nam\n+ 0x003f97e8 653a2000 0a716c3a 20000000 0971723a e: ..ql: ....qr:\n+ 0x003f97f8 20000000 0a736c3a 20000000 0973723a ....sl: ....sr:\n+ 0x003f9808 20000000 0a636c3a 20000000 0963723a ....cl: ....cr:\n+ 0x003f9818 20000000 0a6d6c3a 20000000 096d723a ....ml: ....mr:\n+ 0x003f9828 20000000 0a4c6566 74636c69 703a2000 ....Leftclip: .\n+ 0x003f9838 09526967 6874636c 69703a20 00000000 .Rightclip: ....\n+ 0x003f9848 094c656e 3a200000 29094c65 6e536571 .Len: ..).LenSeq\n+ 0x003f9858 3a200000 0a4c6566 74657874 656e643a : ...Leftextend:\n+ 0x003f9868 20000000 09526967 68746578 74656e64 ....Rightextend\n+ 0x003f9878 3a200000 0a54656d 706c6174 653a2000 : ...Template: .\n+ 0x003f9888 0954656d 706c6174 65207365 676d656e .Template segmen\n+ 0x003f9898 743a2000 0a542d49 443a2000 09545061 t: ..T-ID: ..TPa\n+ 0x003f98a8 72746e65 722d4944 3a200000 52472d49 rtner-ID: ..RG-I\n+ 0x003f98b8 6e666f0a 00000000 52474944 3a200000 nfo.....RGID: ..\n+ 0x003f98c8 52474e3a 20000000 09534e3a 20000000 RGN: ....SN: ...\n+ 0x003f98d8 0a53503a 20000000 09535069 6f3a2000 .SP: ....SPio: .\n+ 0x003f98e8 09535043 3a200000 0949463a 20000000 .SPC: ...IF: ...\n+ 0x003f98f8 0949543a 20000000 09545369 6f3a2000 .IT: ....TSio: .\n+ 0x003f9908 0a53543a 20000000 29096e61 6d736368 .ST: ...).namsch\n+ 0x003f9918 656d3a20 00000000 09534944 3a200000 em: .....SID: ..\n+ 0x003f9928 0a44513a 20000000 0a42423a 20000000 .DQ: ....BB: ...\n+ 0x003f9938 09526169 6c3a2000 09434552 3a200000 .Rail: ..CER: ..\n+ 0x003f9948 524c453a 20000000 0a546167 733a0a00 RLE: ....Tags:..\n+ 0x003f9958 54616720 00000000 220a0000 0a0a5265 Tag ....\".....Re\n+ 0x003f9968 61642073 697a6520 70616464 65643a20 ad size padded: \n+ 0x003f9978 00000000 0a526561 64207061 64646564 .....Read padded\n+ 0x003f9988 20736571 75656e63 653a0a00 466f7277 sequence:..Forw\n+ 0x003f9998 61726420 70616464 65642064 69727479 ard padded dirty\n+ 0x003f99a8 2e0a0000 0a0a5265 61642063 6f6d706c ......Read compl\n+ 0x003f99b8 656d656e 74207369 7a652070 61646465 ement size padde\n+ 0x003f99c8 643a2000 0a526561 64207061 64646564 d: ..Read padded\n+ 0x003f99d8 20636f6d 706c656d 656e7420 73657175 complement sequ\n+ 0x003f99e8 656e6365 3a0a0000 436f6d70 6c656d65 ence:...Compleme\n+ 0x003f99f8 6e742070 61646465 64206469 7274792e nt padded dirty.\n+ 0x003f9a08 0a000000 0a526561 64207061 64646564 .....Read padded\n+ 0x003f9a18 20736571 75656e63 652c2061 646a7573 sequence, adjus\n+ 0x003f9a28 746d656e 742c2071 75616c69 74792c20 tment, quality, \n+ 0x003f9a38 62617365 666c6167 733a0a00 20696e76 baseflags:.. inv\n+ 0x003f9a48 21000000 094e6f41 646a0000 663a2000 !....NoAdj..f: .\n+ 0x003f9a58 76616c69 64200000 696e766c 64200000 valid ..invld ..\n+ 0x003f9a68 736c7020 00000000 66722000 6d737420 slp ....fr .mst \n+ 0x003f9a78 00000000 6b6d7266 20000000 723b2000 ....kmrf ...r; .\n+ 0x003f9a88 53616e69 74792063 6865636b 206f6620 Sanity check of \n+ 0x003f9a98 72656164 20270000 27206661 696c6564 read '..' failed\n+ 0x003f9aa8 00000000 20686173 206e6f20 76616c69 .... has no vali\n+ 0x003f9ab8 64206461 74613f00 766f6964 20526561 d data?.void Rea\n+ 0x003f9ac8 643a3a69 6e746567 72697479 43686563 d::integrityChec\n+ 0x003f9ad8 6b282920 636f6e73 74200000 25780000 k() const ..%x..\n+ 0x003f9ae8 72656164 77697468 6f75746e 616d655f readwithoutname_\n+ 0x003f9af8 00000000 3e69766c 645f0000 0a300a00 ....>ivld_...0..\n+ 0x003f9b08 30302000 766f6964 20526561 643a3a64 00 .void Read::d\n+ 0x003f9b18 756d7054 61677341 73474646 33287374 umpTagsAsGFF3(st\n+ 0x003f9b28 643a3a6f 73747265 616d2026 206f7374 d::ostream & ost\n+ 0x003f9b38 72290000 094d4952 41096578 70657269 r)...MIRA.experi\n+ 0x003f9b48 6d656e74 616c5f66 65617475 72650931 mental_feature.1\n+ 0x003f9b58 0931092e 092e092e 0973743d 00000000 .1.......st=....\n+ 0x003f9b68 3b736e3d 00000000 3b6d743d 00000000 ;sn=....;mt=....\n+ 0x003f9b78 3b62623d 31000000 3b72723d 31000000 ;bb=1...;rr=1...\n+ 0x003f9b88 3b636572 3d310000 3b6d6972 61697461 ;cer=1..;miraita\n+ 0x003f9b98 673d4d49 54320a00 766f6964 20636861 g=MIT2..void cha\n+ 0x003f9ba8 6e676542 61736549 6e536571 75656e63 ngeBaseInSequenc\n+ 0x003f9bb8 65286368 61722062 6173652c 20626173 e(char base, bas\n+ 0x003f9bc8 655f7175 616c6974 795f7420 7175616c e_quality_t qual\n+ 0x003f9bd8 6974792c 20696e74 33322070 6f736974 ity, int32 posit\n+ 0x003f9be8 696f6e29 00000000 3a20706f 73697469 ion)....: positi\n+ 0x003f9bf8 6f6e2028 00000000 29203e3d 2073697a on (....) >= siz\n+ 0x003f9c08 65206f66 20726561 64202800 29203e3d e of read (.) >=\n+ 0x003f9c18 20524541 5f706164 6465645f 636f6d70 REA_padded_comp\n+ 0x003f9c28 6c656d65 6e747365 7175656e 63652e73 lementsequence.s\n+ 0x003f9c38 697a6520 28000000 3a206370 6f736974 ize (...: cposit\n+ 0x003f9c48 696f6e20 28000000 2029203e 3d205245 ion (... ) >= RE\n+ 0x003f9c58 415f7061 64646564 5f636f6d 706c656d A_padded_complem\n+ 0x003f9c68 656e7473 65717565 6e63652e 73697a65 entsequence.size\n+ 0x003f9c78 20280000 506f7369 74696f6e 203e3d20 (..Position >= \n+ 0x003f9c88 6c656e20 6f662063 6c697070 65642072 len of clipped r\n+ 0x003f9c98 65616420 3f000000 766f6964 20526561 ead ?...void Rea\n+ 0x003f9ca8 643a3a63 68616e67 65426173 65496e43 d::changeBaseInC\n+ 0x003f9cb8 6c697070 65645365 7175656e 63652863 lippedSequence(c\n+ 0x003f9cc8 68617220 62617365 2c206261 73655f71 har base, base_q\n+ 0x003f9cd8 75616c69 74795f74 20717561 6c697479 uality_t quality\n+ 0x003f9ce8 2c207569 6e743332 20706f73 6974696f , uint32 positio\n+ 0x003f9cf8 6e290000 766f6964 20526561 643a3a63 n)..void Read::c\n+ 0x003f9d08 68616e67 65426173 65496e43 6c697070 hangeBaseInClipp\n+ 0x003f9d18 6564436f 6d706c65 6d656e74 53657175 edComplementSequ\n+ 0x003f9d28 656e6365 28636861 72206261 73652c20 ence(char base, \n+ 0x003f9d38 62617365 5f717561 6c697479 5f742071 base_quality_t q\n+ 0x003f9d48 75616c69 74792c20 75696e74 33322070 uality, uint32 p\n+ 0x003f9d58 6f736974 696f6e29 00000000 766f6964 osition)....void\n+ 0x003f9d68 20526561 643a3a63 68616e67 6541646a Read::changeAdj\n+ 0x003f9d78 7573746d 656e7428 75696e74 33322070 ustment(uint32 p\n+ 0x003f9d88 6f736974 696f6e2c 20696e74 3332206e osition, int32 n\n+ 0x003f9d98 65776164 6a757374 6d656e74 29000000 ewadjustment)...\n+ 0x003f9da8 3a207472 79696e67 20746f20 6368616e : trying to chan\n+ 0x003f9db8 67652061 646a7573 746d656e 7420696e ge adjustment in\n+ 0x003f9dc8 20726561 64207768 69636820 646f6573 read which does\n+ 0x003f9dd8 206e6f74 20686176 6520616e 793f0000 not have any?..\n+ 0x003f9de8 3a207472 79696e67 20746f20 6368616e : trying to chan\n+ 0x003f9df8 67652061 646a7573 746d656e 74206174 ge adjustment at\n+ 0x003f9e08 20706f73 6974696f 6e200000 20627574 position .. but\n+ 0x003f9e18 2073697a 65206f66 2061646a 7573746d size of adjustm\n+ 0x003f9e28 656e7420 6973206f 6e6c7920 00000000 ent is only ....\n+ 0x003f9e38 766f6964 20526561 643a3a73 6574436c void Read::setCl\n+ 0x003f9e48 69706f66 66732875 696e7433 32206c63 ipoffs(uint32 lc\n+ 0x003f9e58 6c69702c 2075696e 74333220 72636c69 lip, uint32 rcli\n+ 0x003f9e68 702c2062 6f6f6c20 666f7263 65290000 p, bool force)..\n+ 0x003f9e78 6c636c69 70203c20 303f0000 72636c69 lclip < 0?..rcli\n+ 0x003f9e88 70203c20 303f0000 766f6964 20526561 p < 0?..void Rea\n+ 0x003f9e98 643a3a73 65744c51 436c6970 6f666673 d::setLQClipoffs\n+ 0x003f9ea8 28696e74 3332206c 636c6970 29000000 (int32 lclip)...\n+ 0x003f9eb8 766f6964 20526561 643a3a73 65745251 void Read::setRQ\n+ 0x003f9ec8 436c6970 6f666673 28696e74 33322072 Clipoffs(int32 r\n+ 0x003f9ed8 636c6970 29000000 766f6964 20526561 clip)...void Rea\n+ 0x003f9ee8 643a3a73 65744c53 436c6970 6f666673 d::setLSClipoffs\n+ 0x003f9ef8 28696e74 3332206c 636c6970 29000000 (int32 lclip)...\n+ 0x003f9f08 766f6964 20526561 643a3a73 65745253 void Read::setRS\n+ 0x003f9f18 436c6970 6f666673 28696e74 33322072 Clipoffs(int32 r\n+ 0x003f9f28 636c6970 29000000 696e7433 32205265 clip)...int32 Re\n+ 0x003f9f38 61643a3a 7365744c 4d436c69 706f6666 ad::setLMClipoff\n+ 0x003f9f48 28696e74 3332206c 636c6970 29000000 (int32 lclip)...\n+ 0x003f9f58 696e7433 32205265 61643a3a 73657452 int32 Read::setR\n+ 0x003f9f68 4d436c69 706f6666 28696e74 33322072 MClipoff(int32 r\n+ 0x003f9f78 636c6970 29000000 74726965 6420746f clip)...tried to\n+ 0x003f9f88 20736574 20612062 61736520 27000000 set a base '...\n+ 0x003f9f98 27202841 53434949 3a200000 292c2077 ' (ASCII: ..), w\n+ 0x003f9fa8 68696368 20697320 6e6f7420 61207661 hich is not a va\n+ 0x003f9fb8 6c696420 49555041 43206261 7365206e lid IUPAC base n\n+ 0x003f9fc8 6f72204e 2c20582c 202d206f 7220402e or N, X, - or @.\n+ 0x003f9fd8 00000000 766f6964 20526561 643a3a73 ....void Read::s\n+ 0x003f9fe8 65745365 7175656e 63654672 6f6d5374 etSequenceFromSt\n+ 0x003f9ff8 72696e67 28636f6e 73742063 68617220 ring(const char \n+ 0x003fa008 2a207365 7175656e 63652900 6e6f206e * sequence).no n\n+ 0x003fa018 616d6520 67697665 6e000000 766f6964 ame given...void\n+ 0x003fa028 20526561 643a3a69 6e697469 616c6973 Read::initialis\n+ 0x003fa038 65526561 6428626f 6f6c2070 72657365 eRead(bool prese\n+ 0x003fa048 7276655f 6f726967 696e616c 732c202e rve_originals, .\n+ 0x003fa058 2e2e2c20 2e2e2e3c 62617365 5f717561 .., ..., ...)...\n+ 0x003fa078 7175616c 69746965 732e7369 7a652829 qualities.size()\n+ 0x003fa088 20000000 20213d20 73657175 656e6365 ... != sequence\n+ 0x003fa098 2e73697a 65282920 00000000 20666f72 .size() .... for\n+ 0x003fa0a8 3a200000 61646a75 73746d65 6e74732e : ..adjustments.\n+ 0x003fa0b8 73697a65 28292000 426f7468 20736571 size() .Both seq\n+ 0x003fa0c8 20616e64 20636f6d 706c2e73 65712e20 and compl.seq. \n+ 0x003fa0d8 61726520 74616767 65642064 69727479 are tagged dirty\n+ 0x003fa0e8 2e000000 766f6964 20526561 643a3a68 ....void Read::h\n+ 0x003fa0f8 656c7065 725f7265 66726573 68506164 elper_refreshPad\n+ 0x003fa108 64656453 65717565 6e636528 29000000 dedSequence()...\n+ 0x003fa118 766f6964 20526561 643a3a73 6d6f6f74 void Read::smoot\n+ 0x003fa128 68536571 75656e63 65526570 6c616365 hSequenceReplace\n+ 0x003fa138 2875696e 74333220 706f7369 74696f6e (uint32 position\n+ 0x003fa148 2c207569 6e743332 206c656e 2c207374 , uint32 len, st\n+ 0x003fa158 643a3a73 74643a3a 73747269 6e672026 d::std::string &\n+ 0x003fa168 20726570 6c616365 6d656e74 29000000 replacement)...\n+ 0x003fa178 43757272 656e746c 7920646f 65736e27 Currently doesn'\n+ 0x003fa188 7420776f 726b206f 6e20524c 45000000 t work on RLE...\n+ 0x003fa198 54616773 206e6f74 20656d70 74792c20 Tags not empty, \n+ 0x003fa1a8 6e6f7420 696d706c 656d656e 74656420 not implemented \n+ 0x003fa1b8 61746d00 0a6e0a00 4069766c 645f0000 atm..n..@ivld_..\n+ 0x003fa1c8 40000000 0a2b0a00 766f6964 20526561 @....+..void Rea\n+ 0x003fa1d8 643a3a64 756d7041 73434146 28737464 d::dumpAsCAF(std\n+ 0x003fa1e8 3a3a6f73 74726561 6d202620 6f737472 ::ostream & ostr\n+ 0x003fa1f8 29000000 53657175 656e6365 203a2069 )...Sequence : i\n+ 0x003fa208 766c645f 00000000 49735f72 6561640a vld_....Is_read.\n+ 0x003fa218 0a000000 0a444e41 203a2000 0a426173 .....DNA : ..Bas\n+ 0x003fa228 65517561 6c697479 203a2000 53657175 eQuality : .Sequ\n+ 0x003fa238 656e6365 203a2000 49735f72 6561640a ence : .Is_read.\n+ 0x003fa248 50616464 65640a00 53657175 656e6369 Padded..Sequenci\n+ 0x003fa258 6e675f76 6563746f 72202200 54656d70 ng_vector \".Temp\n+ 0x003fa268 6c617465 20220000 53747261 6e642046 late \"..Strand F\n+ 0x003fa278 6f727761 72640a00 53747261 6e642052 orward..Strand R\n+ 0x003fa288 65766572 73650a00 496e7365 72745f73 everse..Insert_s\n+ 0x003fa298 697a6520 00000000 42617365 5f63616c ize ....Base_cal\n+ 0x003fa2a8 6c657220 22000000 41737065 64202200 ler \"...Asped \".\n+ 0x003fa2b8 50726f63 65737353 74617475 73202200 ProcessStatus \".\n+ 0x003fa2c8 44796520 22000000 5072696d 65722000 Dye \"...Primer .\n+ 0x003fa2d8 5365715f 76656320 53564543 20312000 Seq_vec SVEC 1 .\n+ 0x003fa2e8 5365715f 76656320 53564543 20000000 Seq_vec SVEC ...\n+ 0x003fa2f8 436c6970 70696e67 20515541 4c200000 Clipping QUAL ..\n+ 0x003fa308 436c6f6e 655f7665 63204356 45432031 Clone_vec CVEC 1\n+ 0x003fa318 20000000 436c6f6e 655f7665 63204356 ...Clone_vec CV\n+ 0x003fa328 45432000 54616720 4d495432 20312031 EC .Tag MIT2 1 1\n+ 0x003fa338 20227374 3d000000 54797065 20414249 \"st=...Type ABI\n+ 0x003fa348 20534f4c 6944206e 65656473 206d6f72 SOLiD needs mor\n+ 0x003fa358 65207375 70706f72 7420372e 00000000 e support 7.....\n+ 0x003fa368 466f7220 72656164 20000000 3a20756e For read ...: un\n+ 0x003fa378 6b6e6f77 6e207365 71747970 6520636f known seqtype co\n+ 0x003fa388 64652000 416c6c6f 77656420 6172653a de .Allowed are:\n+ 0x003fa398 2053616e 6765722c 20343534 2c20496f Sanger, 454, Io\n+ 0x003fa3a8 6e546f72 2c205061 6342696f 4c512c20 nTor, PacBioLQ, \n+ 0x003fa3b8 50616342 696f4851 2c205465 78742c20 PacBioHQ, Text, \n+ 0x003fa3c8 536f6c65 78612c20 534f4c69 442e0a00 Solexa, SOLiD...\n+ 0x003fa3d8 496c6c65 67616c20 72656164 74797065 Illegal readtype\n+ 0x003fa3e8 3f000000 3b70633d 73660000 3b70633d ?...;pc=sf..;pc=\n+ 0x003fa3f8 73620000 3b70633d 73750000 3b70633d sb..;pc=su..;pc=\n+ 0x003fa408 66720000 3b70633d 72660000 4f6f6f6f fr..;pc=rf..Oooo\n+ 0x003fa418 70733f20 496c6c65 67616c20 7465706c ps? Illegal tepl\n+ 0x003fa428 61746520 706c6163 656d656e 7420636f ate placement co\n+ 0x003fa438 64652000 52440969 766c645f 00000000 de .RD.ivld_....\n+ 0x003fa448 0a45520a 00000000 52440900 52470900 .ER.....RD..RG..\n+ 0x003fa458 4c520900 52530900 52510900 53560900 LR..RS..RQ..SV..\n+ 0x003fa468 544e0900 54530900 534c0900 53520900 TN..TS..SL..SR..\n+ 0x003fa478 514c0900 51520900 434c0900 43520900 QL..QR..CL..CR..\n+ 0x003fa488 414f0900 45520a00 52540000 3a206761 AO..ER..RT..: ga\n+ 0x003fa498 7073697a 65202800 29203c20 30203f00 psize (.) < 0 ?.\n+ 0x003fa4a8 766f6964 20526561 643a3a73 6574436c void Read::setCl\n+ 0x003fa4b8 69706f66 6673746f 4d61736b 65644368 ipoffstoMaskedCh\n+ 0x003fa4c8 61727328 696e7433 32206761 7073697a ars(int32 gapsiz\n+ 0x003fa4d8 652c2069 6e743332 2066726f 6e746773 e, int32 frontgs\n+ 0x003fa4e8 2c20696e 74333220 656e6467 732c2062 , int32 endgs, b\n+ 0x003fa4f8 6f6f6c20 616c6c6f 774e2900 766f6964 ool allowN).void\n+ 0x003fa508 20526561 643a3a66 69785a65 726f4761 Read::fixZeroGa\n+ 0x003fa518 70517561 6c732829 00000000 766f6964 pQuals()....void\n+ 0x003fa528 20526561 643a3a74 72616e73 666f726d Read::transform\n+ 0x003fa538 47617073 546f4e73 28290000 3a207265 GapsToNs()..: re\n+ 0x003fa548 6164706f 73202800 696e7433 32206765 adpos (.int32 ge\n+ 0x003fa558 7441646a 7573746d 656e7450 6f734f66 tAdjustmentPosOf\n+ 0x003fa568 52656164 506f7328 696e7433 3220706f ReadPos(int32 po\n+ 0x003fa578 73697469 6f6e2900 696e7433 32205265 sition).int32 Re\n+ 0x003fa588 61643a3a 6765744c 6f776572 4e6f6e47 ad::getLowerNonG\n+ 0x003fa598 61704164 6a757374 6d656e74 506f734f apAdjustmentPosO\n+ 0x003fa5a8 66526561 64506f73 28636f6e 73742075 fReadPos(const u\n+ 0x003fa5b8 696e7433 3220706f 73697469 6f6e2920 int32 position) \n+ 0x003fa5c8 636f6e73 74000000 696e7433 32205265 const...int32 Re\n+ 0x003fa5d8 61643a3a 67657455 70706572 4e6f6e47 ad::getUpperNonG\n+ 0x003fa5e8 61704164 6a757374 6d656e74 506f734f apAdjustmentPosO\n+ 0x003fa5f8 66526561 64506f73 28636f6e 73742075 fReadPos(const u\n+ 0x003fa608 696e7433 3220706f 73697469 6f6e2920 int32 position) \n+ 0x003fa618 636f6e73 74000000 29203e3d 20524541 const...) >= REA\n+ 0x003fa628 5f706164 6465645f 73657175 656e6365 _padded_sequence\n+ 0x003fa638 2e73697a 65202800 696e7433 32205265 .size (.int32 Re\n+ 0x003fa648 61643a3a 6765744c 6f776572 4e6f6e47 ad::getLowerNonG\n+ 0x003fa658 6170506f 734f6652 65616450 6f732863 apPosOfReadPos(c\n+ 0x003fa668 6f6e7374 2075696e 74333220 706f7369 onst uint32 posi\n+ 0x003fa678 74696f6e 2920636f 6e737400 696e7433 tion) const.int3\n+ 0x003fa688 32205265 61643a3a 67657455 70706572 2 Read::getUpper\n+ 0x003fa698 4e6f6e47 6170506f 734f6652 65616450 NonGapPosOfReadP\n+ 0x003fa6a8 6f732863 6f6e7374 2075696e 74333220 os(const uint32 \n+ 0x003fa6b8 706f7369 74696f6e 2920636f 6e737400 position) const.\n+ 0x003fa6c8 636f6e73 74206368 6172202a 20526561 const char * Rea\n+ 0x003fa6d8 643a3a67 6574436c 69707065 64536571 d::getClippedSeq\n+ 0x003fa6e8 41734368 61722829 00000000 63686172 AsChar()....char\n+ 0x003fa6f8 20526561 643a3a67 65744261 7365496e Read::getBaseIn\n+ 0x003fa708 53657175 656e6365 2875696e 74333220 Sequence(uint32 \n+ 0x003fa718 706f7329 00000000 63686172 20526561 pos)....char Rea\n+ 0x003fa728 643a3a67 65744261 7365496e 436c6970 d::getBaseInClip\n+ 0x003fa738 70656453 65717565 6e636528 75696e74 pedSequence(uint\n+ 0x003fa748 33322070 6f732900 75696e74 33322052 32 pos).uint32 R\n+ 0x003fa758 6561643a 3a676574 4c6f7765 72426f75 ead::getLowerBou\n+ 0x003fa768 6e64506f 734f6642 61736552 756e2875 ndPosOfBaseRun(u\n+ 0x003fa778 696e7433 3220706f 732c2063 68617220 int32 pos, char \n+ 0x003fa788 62617365 2c20636f 6e737420 626f6f6c base, const bool\n+ 0x003fa798 20616c73 6f74616b 65676170 2920636f alsotakegap) co\n+ 0x003fa7a8 6e737400 75696e74 33322052 6561643a nst.uint32 Read:\n+ 0x003fa7b8 3a676574 55707065 72426f75 6e64506f :getUpperBoundPo\n+ 0x003fa7c8 734f6642 61736552 756e2875 696e7433 sOfBaseRun(uint3\n+ 0x003fa7d8 3220706f 732c2063 68617220 62617365 2 pos, char base\n+ 0x003fa7e8 2c20636f 6e737420 626f6f6c 20616c73 , const bool als\n+ 0x003fa7f8 6f74616b 65676170 2920636f 6e737400 otakegap) const.\n+ 0x003fa808 75696e74 33322052 6561643a 3a676574 uint32 Read::get\n+ 0x003fa818 4c656e4f 66476170 52756e28 75696e74 LenOfGapRun(uint\n+ 0x003fa828 33322070 6f732920 636f6e73 74000000 32 pos) const...\n+ 0x003fa838 746f6c65 72616e63 656c656e 203c3000 tolerancelen <0.\n+ 0x003fa848 766f6964 20526561 643a3a74 72616e73 void Read::trans\n+ 0x003fa858 66657253 56546167 73546f43 6c697028 ferSVTagsToClip(\n+ 0x003fa868 696e7433 3220746f 6c657261 6e63656c int32 tolerancel\n+ 0x003fa878 656e2900 636c6970 73656172 63686c65 en).clipsearchle\n+ 0x003fa888 6e203c30 00000000 20616c72 65616479 n <0.... already\n+ 0x003fa898 20524c45 643f0000 766f6964 20526561 RLEd?..void Rea\n+ 0x003fa8a8 643a3a72 6c655265 61642829 00000000 d::rleRead()....\n+ 0x003fa8b8 206e6f74 20524c45 643f0000 766f6964 not RLEd?..void\n+ 0x003fa8c8 20526561 643a3a64 65524c45 52656164 Read::deRLERead\n+ 0x003fa8d8 28290000 3020524c 45207661 6c756520 ()..0 RLE value \n+ 0x003fa8e8 61742070 6f732000 31205245 415f7061 at pos .1 REA_pa\n+ 0x003fa8f8 64646564 5f736571 75656e63 652e7369 dded_sequence.si\n+ 0x003fa908 7a652829 3c676574 52696768 74436c69 ze()size() REA_padd\n+ 0x003fad08 65645f63 6f6d706c 656d656e 74736571 ed_complementseq\n+ 0x003fad18 75656e63 652e7369 7a652028 00000000 uence.size (....\n+ 0x003fad28 3a20636f 6d706c65 6d656e74 5f706f73 : complement_pos\n+ 0x003fad38 6974696f 6e202800 203e2052 45415f71 ition (. > REA_q\n+ 0x003fad48 75616c69 74696573 2e73697a 65202800 ualities.size (.\n+ 0x003fad58 29203e20 5245415f 61646a75 73746d65 ) > REA_adjustme\n+ 0x003fad68 6e74732e 73697a65 20280000 203e2052 nts.size (.. > R\n+ 0x003fad78 45415f72 6c657670 74722d3e 73697a65 EA_rlevptr->size\n+ 0x003fad88 20280000 203e2052 45415f62 706f7368 (.. > REA_bposh\n+ 0x003fad98 61736873 74617473 2e73697a 65202800 ashstats.size (.\n+ 0x003fada8 766f6964 20526561 643a3a69 6e736572 void Read::inser\n+ 0x003fadb8 74426173 65496e53 65717565 6e636528 tBaseInSequence(\n+ 0x003fadc8 63686172 20626173 652c2062 6173655f char base, base_\n+ 0x003fadd8 7175616c 6974795f 74207175 616c6974 quality_t qualit\n+ 0x003fade8 792c2069 6e743332 20706f73 6974696f y, int32 positio\n+ 0x003fadf8 6e2c2062 6f6f6c20 65787465 6e64735f n, bool extends_\n+ 0x003fae08 636c6970 7065645f 61726561 29000000 clipped_area)...\n+ 0x003fae18 29203e20 5245415f 70616464 65645f73 ) > REA_padded_s\n+ 0x003fae28 65717565 6e63652e 73697a65 20280000 equence.size (..\n+ 0x003fae38 29203e20 5245415f 7175616c 69746965 ) > REA_qualitie\n+ 0x003fae48 732e7369 7a652028 00000000 203e2052 s.size (.... > R\n+ 0x003fae58 45415f61 646a7573 746d656e 74732e73 EA_adjustments.s\n+ 0x003fae68 697a6520 28000000 506f7369 74696f6e ize (...Position\n+ 0x003fae78 203e206c 656e206f 6620636c 69707065 > len of clippe\n+ 0x003fae88 64207265 6164203f 00000000 766f6964 d read ?....void\n+ 0x003fae98 20526561 643a3a69 6e736572 74426173 Read::insertBas\n+ 0x003faea8 65496e43 6c697070 65645365 7175656e eInClippedSequen\n+ 0x003faeb8 63652863 68617220 62617365 2c206261 ce(char base, ba\n+ 0x003faec8 73655f71 75616c69 74795f74 20717561 se_quality_t qua\n+ 0x003faed8 6c697479 2c207569 6e743332 20706f73 lity, uint32 pos\n+ 0x003faee8 6974696f 6e2c2062 6f6f6c20 65787465 ition, bool exte\n+ 0x003faef8 6e64735f 636c6970 7065645f 61726561 nds_clipped_area\n+ 0x003faf08 29000000 766f6964 20526561 643a3a69 )...void Read::i\n+ 0x003faf18 6e736572 74426173 65496e43 6c697070 nsertBaseInClipp\n+ 0x003faf28 6564436f 6d706c65 6d656e74 53657175 edComplementSequ\n+ 0x003faf38 656e6365 28636861 72206261 73652c20 ence(char base, \n+ 0x003faf48 62617365 5f717561 6c697479 5f742071 base_quality_t q\n+ 0x003faf58 75616c69 74792c20 696e7433 3220706f uality, int32 po\n+ 0x003faf68 73697469 6f6e2c20 626f6f6c 20657874 sition, bool ext\n+ 0x003faf78 656e6473 5f636c69 70706564 5f617265 ends_clipped_are\n+ 0x003faf88 61290000 766f6964 20526561 643a3a64 a)..void Read::d\n+ 0x003faf98 656c6574 65426173 6546726f 6d436f6d eleteBaseFromCom\n+ 0x003fafa8 706c656d 656e7453 65717565 6e636528 plementSequence(\n+ 0x003fafb8 696e7433 32207570 6f736974 696f6e29 int32 uposition)\n+ 0x003fafc8 00000000 20636f6d 706c656d 656e745f .... complement_\n+ 0x003fafd8 706f7369 74696f6e 20280000 29203e3d position (..) >=\n+ 0x003fafe8 20524541 5f61646a 7573746d 656e7473 REA_adjustments\n+ 0x003faff8 2e73697a 65202800 203e3d20 5245415f .size (. >= REA_\n+ 0x003fb008 726c6576 7074722d 3e73697a 65202800 rlevptr->size (.\n+ 0x003fb018 766f6964 20526561 643a3a64 656c6574 void Read::delet\n+ 0x003fb028 65426173 6546726f 6d536571 75656e63 eBaseFromSequenc\n+ 0x003fb038 6528696e 74333220 706f7369 74696f6e e(int32 position\n+ 0x003fb048 29000000 203e3d20 5245415f 61646a75 )... >= REA_adju\n+ 0x003fb058 73746d65 6e74732e 73697a65 20280000 stments.size (..\n+ 0x003fb068 203e3d20 5245415f 62706f73 68617368 >= REA_bposhash\n+ 0x003fb078 73746174 732e7369 7a652028 00000000 stats.size (....\n+ 0x003fb088 766f6964 20526561 643a3a72 656d6f76 void Read::remov\n+ 0x003fb098 65476170 7346726f 6d526561 64282900 eGapsFromRead().\n+ 0x003fb0a8 766f6964 20526561 643a3a63 6f727265 void Read::corre\n+ 0x003fb0b8 63744e53 74726574 63682863 6f6e7374 ctNStretch(const\n+ 0x003fb0c8 20696e74 33322066 726f6d2c 20636f6e int32 from, con\n+ 0x003fb0d8 73742069 6e743332 20746f2c 20696e74 st int32 to, int\n+ 0x003fb0e8 33322063 68616e67 65657374 696d2900 32 changeestim).\n+ 0x003fb0f8 3a206672 6f6d2028 00000000 29203c30 : from (....) <0\n+ 0x003fb108 203f0000 3a20746f 20280000 2066726f ?..: to (.. fro\n+ 0x003fb118 6d3a2000 206e6f74 20657863 6c757369 m: . not exclusi\n+ 0x003fb128 76656c79 204e206f 72202a3f 00000000 vely N or *?....\n+ 0x003fb138 766f6964 20526561 643a3a64 656c6574 void Read::delet\n+ 0x003fb148 65426173 6546726f 6d436c69 70706564 eBaseFromClipped\n+ 0x003fb158 53657175 656e6365 2875696e 74333220 Sequence(uint32 \n+ 0x003fb168 706f7369 74696f6e 29000000 766f6964 position)...void\n+ 0x003fb178 20526561 643a3a64 656c6574 65426173 Read::deleteBas\n+ 0x003fb188 6546726f 6d436c69 70706564 436f6d70 eFromClippedComp\n+ 0x003fb198 6c656d65 6e745365 7175656e 63652869 lementSequence(i\n+ 0x003fb1a8 6e743332 20706f73 6974696f 6e290000 nt32 position)..\n+ 0x003fb1b8 636f6e73 74206368 6172202a 20526561 const char * Rea\n+ 0x003fb1c8 643a3a67 6574436c 69707065 64436f6d d::getClippedCom\n+ 0x003fb1d8 706c656d 656e7453 65714173 43686172 plementSeqAsChar\n+ 0x003fb1e8 28290000 636f6e73 74207374 643a3a76 ()..const std::v\n+ 0x003fb1f8 6563746f 723c6368 61723e3a 3a697465 ector::ite\n+ 0x003fb208 7261746f 72205265 61643a3a 67657443 rator Read::getC\n+ 0x003fb218 6c697070 6564436f 6d706c65 6d656e74 lippedComplement\n+ 0x003fb228 53657149 74657261 746f7228 29000000 SeqIterator()...\n+ 0x003fb238 3a20636f 6d706c65 6d656e74 5f706f73 : complement_pos\n+ 0x003fb248 6c202800 29203e3d 20524541 5f717561 l (.) >= REA_qua\n+ 0x003fb258 6c697469 65732e73 697a6528 00000000 lities.size(....\n+ 0x003fb268 62617365 5f717561 6c697479 5f742052 base_quality_t R\n+ 0x003fb278 6561643a 3a717565 72794176 65726167 ead::queryAverag\n+ 0x003fb288 65517561 6c496e43 6f6d706c 656d656e eQualInComplemen\n+ 0x003fb298 74536571 75656e63 6528696e 74333220 tSequence(int32 \n+ 0x003fb2a8 706f736c 2c20696e 74333220 706f7372 posl, int32 posr\n+ 0x003fb2b8 2c20626f 6f6c2073 6b69704e 732c2062 , bool skipNs, b\n+ 0x003fb2c8 6f6f6c20 736b6970 53746172 73290000 ool skipStars)..\n+ 0x003fb2d8 496c6c65 67616c20 62617365 3a200000 Illegal base: ..\n+ 0x003fb2e8 496c6c65 67616c20 62617365 20666f75 Illegal base fou\n+ 0x003fb2f8 6e643a20 00000000 62617365 5f717561 nd: ....base_qua\n+ 0x003fb308 6c697479 5f742052 6561643a 3a717565 lity_t Read::que\n+ 0x003fb318 72794176 65726167 65517561 6c496e53 ryAverageQualInS\n+ 0x003fb328 65717565 6e636528 696e7433 3220706f equence(int32 po\n+ 0x003fb338 736c2c20 696e7433 3220706f 73722c20 sl, int32 posr, \n+ 0x003fb348 626f6f6c 20736b69 704e732c 20626f6f bool skipNs, boo\n+ 0x003fb358 6c20736b 69705374 61727329 00000000 l skipStars)....\n+ 0x003fb368 766f6964 20526561 643a3a64 756d7041 void Read::dumpA\n+ 0x003fb378 73414345 28737464 3a3a6f73 74726561 sACE(std::ostrea\n+ 0x003fb388 6d202620 6f737472 2c20696e 74333220 m & ostr, int32 \n+ 0x003fb398 64697265 6374696f 6e290000 0a524420 direction)...RD \n+ 0x003fb3a8 00000000 20302030 00000000 4f756368 .... 0 0....Ouch\n+ 0x003fb3b8 2c206661 696c6564 20736563 6f6e6420 , failed second \n+ 0x003fb3c8 63686563 6b2e0000 0a514120 00000000 check....QA ....\n+ 0x003fb3d8 0a445320 00000000 54454d50 4c415445 .DS ....TEMPLATE\n+ 0x003fb3e8 3a200000 4348524f 4d41545f 46494c45 : ..CHROMAT_FILE\n+ 0x003fb3f8 3a200000 5048445f 46494c45 3a200000 : ..PHD_FILE: ..\n+ 0x003fb408 2e706864 2e312000 54494d45 3a205361 .phd.1 .TIME: Sa\n+ 0x003fb418 74204a61 6e202031 2031313a 31313a31 t Jan 1 11:11:1\n+ 0x003fb428 31204d45 53542032 30303000 52547b0a 1 MEST 2000.RT{.\n+ 0x003fb438 00000000 204d4952 41200000 20303230 .... MIRA .. 020\n+ 0x003fb448 3230323a 31323132 31320a00 7d0a0a00 202:121212..}...\n+ 0x003fb458 434f4d4d 454e547b 0a000000 0a437d0a COMMENT{.....C}.\n+ 0x003fb468 00000000 636f6e73 74207374 643a3a76 ....const std::v\n+ 0x003fb478 6563746f 723c6368 61723e3a 3a697465 ector::ite\n+ 0x003fb488 7261746f 72205265 61643a3a 67657443 rator Read::getC\n+ 0x003fb498 6c697070 65645365 71497465 7261746f lippedSeqIterato\n+ 0x003fb4a8 72282900 5175616c 69747920 636c6970 r().Quality clip\n+ 0x003fb4b8 70696e67 20657272 6f723a20 6e6f2062 ping error: no b\n+ 0x003fb4c8 61636b77 61726420 6375746f 66662c20 ackward cutoff, \n+ 0x003fb4d8 62757420 666f7277 61726420 666f756e but forward foun\n+ 0x003fb4e8 643f0000 766f6964 20526561 643a3a70 d?..void Read::p\n+ 0x003fb4f8 6572666f 726d5175 616c6974 79436c69 erformQualityCli\n+ 0x003fb508 70287569 6e743332 20617667 7175616c p(uint32 avgqual\n+ 0x003fb518 2c207569 6e743332 2077696e 6c656e29 , uint32 winlen)\n+ 0x003fb528 00000000 43455200 736e0000 6d740000 ....CER.sn..mt..\n+ 0x003fb538 72720000 70630000 4572726f 7220696e rr..pc..Error in\n+ 0x003fb548 20000000 3a206b65 79207479 70652027 ...: key type '\n+ 0x003fb558 70632720 68617320 756e6b6e 6f776e20 pc' has unknown \n+ 0x003fb568 76616c75 6520696e 204d4954 32207461 value in MIT2 ta\n+ 0x003fb578 673a2000 766f6964 20526561 643a3a65 g: .void Read::e\n+ 0x003fb588 78747261 63744d49 4e465461 67496e66 xtractMINFTagInf\n+ 0x003fb598 6f287374 643a3a76 6563746f 723c6d75 o(std::vector & tags\n+ 0x003fb5b8 2c20636f 6e737420 7374643a 3a737472 , const std::str\n+ 0x003fb5c8 696e6720 26207265 61646e61 6d652c20 ing & readname, \n+ 0x003fb5d8 7374643a 3a737472 696e6720 26206475 std::string & du\n+ 0x003fb5e8 6d6d795f 73747261 696e6e61 6d652c20 mmy_strainname, \n+ 0x003fb5f8 7374643a 3a737472 696e6720 26206475 std::string & du\n+ 0x003fb608 6d6d795f 73657174 7970656e 616d652c mmy_seqtypename,\n+ 0x003fb618 20737464 3a3a7374 72696e67 20262064 std::string & d\n+ 0x003fb628 756d6d79 5f6d6163 68696e65 74797065 ummy_machinetype\n+ 0x003fb638 2c20696e 74382026 2064756d 6d795f74 , int8 & dummy_t\n+ 0x003fb648 706c6163 656d656e 74636f64 652c2062 placementcode, b\n+ 0x003fb658 6f6f6c20 26206475 6d6d795f 69736262 ool & dummy_isbb\n+ 0x003fb668 2c20626f 6f6c2026 2064756d 6d795f69 , bool & dummy_i\n+ 0x003fb678 73434552 29000000 63657200 20776974 sCER)...cer. wit\n+ 0x003fb688 6820756e 6b6e6f77 6e206b65 79207479 h unknown key ty\n+ 0x003fb698 70652027 00000000 2720696e 204d4954 pe '....' in MIT\n+ 0x003fb6a8 32207461 673a2000 4e6f7465 3d000000 2 tag: .Note=...\n+ 0x003fb6b8 4d495241 00000000 54727969 6e672074 MIRA....Trying t\n+ 0x003fb6c8 6f206c6f 61642053 43462066 726f6d20 o load SCF from \n+ 0x003fb6d8 756e6974 69616c69 73656420 52656164 unitialised Read\n+ 0x003fb6e8 2e000000 766f6964 20526561 643a3a63 ....void Read::c\n+ 0x003fb6f8 6865636b 53434641 6e644c6f 61645175 heckSCFAndLoadQu\n+ 0x003fb708 616c2862 6f6f6c20 6a757374 63686563 al(bool justchec\n+ 0x003fb718 6b290000 5761726e 696e673a 20000000 k)..Warning: ...\n+ 0x003fb728 5761726e 696e673a 204e756d 62657220 Warning: Number \n+ 0x003fb738 6f662062 61736573 20696e20 53434620 of bases in SCF \n+ 0x003fb748 66696c65 20280000 2920646f 6573206e file (..) does n\n+ 0x003fb758 6f742063 6f727265 73706f6e 6420746f ot correspond to\n+ 0x003fb768 20746865 206e756d 62657220 6f662062 the number of b\n+ 0x003fb778 61736573 20657870 65637465 6420696e ases expected in\n+ 0x003fb788 20746865 20726561 64202872 65616420 the read (read \n+ 0x003fb798 66726f6d 20666173 74612c20 6578702c from fasta, exp,\n+ 0x003fb7a8 20706864 206f7220 63616620 66696c65 phd or caf file\n+ 0x003fb7b8 292e0a52 65616420 77696c6c 205f6e6f )..Read will _no\n+ 0x003fb7c8 745f2062 65207573 65642069 6e206173 t_ be used in as\n+ 0x003fb7d8 73656d62 6c792100 5761726e 696e673a sembly!.Warning:\n+ 0x003fb7e8 20412062 61736520 28000000 2920696e A base (...) in\n+ 0x003fb7f8 20746865 20534346 20280000 2920646f the SCF (..) do\n+ 0x003fb808 6573206e 6f742063 6f727265 73706f6e es not correspon\n+ 0x003fb818 6420746f 20746865 20746865 206f6e65 d to the the one\n+ 0x003fb828 20280000 2920696e 20746865 20726561 (..) in the rea\n+ 0x003fb838 64207265 61642066 726f6d20 66617374 d read from fast\n+ 0x003fb848 612c2065 78702c20 70686420 6f722063 a, exp, phd or c\n+ 0x003fb858 61662028 706f7369 74696f6e 3a200000 af (position: ..\n+ 0x003fb868 4e6f2073 63666e61 6d652067 6976656e No scfname given\n+ 0x003fb878 3f000000 766f6964 20526561 643a3a6c ?...void Read::l\n+ 0x003fb888 6f616444 61746146 726f6d53 43462863 oadDataFromSCF(c\n+ 0x003fb898 6f6e7374 20737464 3a3a7374 72696e67 onst std::string\n+ 0x003fb8a8 20262073 63666e61 6d652900 4e6f2073 & scfname).No s\n+ 0x003fb8b8 63662064 61746120 61766169 6c61626c cf data availabl\n+ 0x003fb8c8 6520666f 72200000 556e6578 70656374 e for ..Unexpect\n+ 0x003fb8d8 65642065 72726f72 20776865 72652069 ed error where i\n+ 0x003fb8e8 74207368 6f756c64 206e6f74 20686170 t should not hap\n+ 0x003fb8f8 70656e3a 20000000 41742062 61736520 pen: ...At base \n+ 0x003fb908 706f7369 74696f6e 20000000 3a206261 position ...: ba\n+ 0x003fb918 73652000 20756e6b 6e6f776e 20495550 se . unknown IUP\n+ 0x003fb928 41432063 6f64653f 0a000000 54686520 AC code?....The \n+ 0x003fb938 65787065 72696d65 6e742068 6173206e experiment has n\n+ 0x003fb948 6f206e61 6d652028 6e6f2049 44206669 o name (no ID fi\n+ 0x003fb958 656c6420 666f756e 64293a20 00000000 eld found): ....\n+ 0x003fb968 766f6964 20526561 643a3a6c 6f616444 void Read::loadD\n+ 0x003fb978 61746146 726f6d45 58502829 00000000 ataFromEXP()....\n+ 0x003fb988 4e6f2062 61736573 20776572 6520666f No bases were fo\n+ 0x003fb998 756e643a 20000000 5761726e 696e6720 und: ...Warning \n+ 0x003fb9a8 696e3a20 00000000 5741524e 494e473a in: ....WARNING:\n+ 0x003fb9b8 20000000 20202068 6173206e 6f206261 ... has no ba\n+ 0x003fb9c8 73657320 696e2074 68652065 78706572 ses in the exper\n+ 0x003fb9d8 696d656e 74206669 6c653f00 53657175 iment file?.Sequ\n+ 0x003fb9e8 656e6365 206c656e 6774683a 20000000 ence length: ...\n+ 0x003fb9f8 4e756d62 6572206f 66207175 616c6974 Number of qualit\n+ 0x003fba08 79207661 6c756573 3a200000 54686520 y values: ..The \n+ 0x003fba18 65787065 72696d65 6e742068 61732061 experiment has a\n+ 0x003fba28 6e20756e 65717561 6c206e75 6d626572 n unequal number\n+ 0x003fba38 206f6620 62617365 7320616e 64207175 of bases and qu\n+ 0x003fba48 616c6974 79207661 6c756573 20285351 ality values (SQ\n+ 0x003fba58 20767320 41562066 69656c64 73293a20 vs AV fields): \n+ 0x003fba68 00000000 74686572 65207368 6f756c64 ....there should\n+ 0x003fba78 20626520 61206576 656e206e 756d6265 be a even numbe\n+ 0x003fba88 72206f66 204f4e20 61646a75 73746d65 r of ON adjustme\n+ 0x003fba98 6e74733a 20000000 74686520 61646a75 nts: ...the adju\n+ 0x003fbaa8 73746d65 6e747320 67697665 6e20696e stments given in\n+ 0x003fbab8 20746865 204f4e20 74616720 65786365 the ON tag exce\n+ 0x003fbac8 65642074 68652073 697a6520 6f662074 ed the size of t\n+ 0x003fbad8 68652073 65717565 6e63653a 20000000 he sequence: ...\n+ 0x003fbae8 6e61693a 20000000 20206e65 7761646a nai: ... newadj\n+ 0x003fbaf8 7573746d 656e7473 2e73697a 6528293a ustments.size():\n+ 0x003fbb08 20000000 74686520 61646a75 73746d65 ...the adjustme\n+ 0x003fbb18 6e747320 67697665 6e20696e 20746865 nts given in the\n+ 0x003fbb28 204f4e20 74616720 646f206e 6f742063 ON tag do not c\n+ 0x003fbb38 6f766572 20746865 2077686f 6c652072 over the whole r\n+ 0x003fbb48 616e6765 206f6620 73657175 656e6365 ange of sequence\n+ 0x003fbb58 3a200000 3d2b2d00 4f6f6f6f 70732c20 : ..=+-.Oooops, \n+ 0x003fbb68 64656c65 74656420 65766572 79746869 deleted everythi\n+ 0x003fbb78 6e673f00 626f6f6c 20436f6e 7469673a ng?.bool Contig:\n+ 0x003fbb88 3a746374 725f6865 6c706572 31287569 :tctr_helper1(ui\n+ 0x003fbb98 6e743332 2066726f 6d706f73 2c207569 nt32 frompos, ui\n+ 0x003fbba8 6e743332 20746f70 6f732c20 626f6f6c nt32 topos, bool\n+ 0x003fbbb8 2073696d 756c6174 656f6e6c 79290000 simulateonly)..\n+ 0x003fbbc8 72656164 706f7320 00000000 203e3d20 readpos .... >= \n+ 0x003fbbd8 00000000 206e6f74 20696e20 72656164 .... not in read\n+ 0x003fbbe8 20000000 766f6964 20436f6e 7469673a ...void Contig:\n+ 0x003fbbf8 3a636865 636b466f 724c6f63 6b656442 :checkForLockedB\n+ 0x003fbc08 61736528 636f6e73 74207569 6e743332 ase(const uint32\n+ 0x003fbc18 20726561 64706f73 2c20506c 61636564 readpos, Placed\n+ 0x003fbc28 436f6e74 69675265 6164733a 3a636f6e ContigReads::con\n+ 0x003fbc38 73745f69 74657261 746f7220 70637249 st_iterator pcrI\n+ 0x003fbc48 2c20696e 74333220 26206261 73656c6f , int32 & baselo\n+ 0x003fbc58 636b2c20 696e7433 32202620 736e706c ck, int32 & snpl\n+ 0x003fbc68 6f636b29 00000000 6e656564 20726564 ock)....need red\n+ 0x003fbc78 6f206361 3120666f 7220506c 61636564 o ca1 for Placed\n+ 0x003fbc88 436f6e74 69675265 61647300 766f6964 ContigReads.void\n+ 0x003fbc98 20436f6e 7469673a 3a616c6c 6f776564 Contig::allowed\n+ 0x003fbca8 52656649 44735f61 6c6c6f77 536f6d65 RefIDs_allowSome\n+ 0x003fbcb8 5261696c 734f6e53 686f7274 52656164 RailsOnShortRead\n+ 0x003fbcc8 436f7665 72616765 28696e74 33322062 Coverage(int32 b\n+ 0x003fbcd8 656c6f77 636f7665 72616765 2c20696e elowcoverage, in\n+ 0x003fbce8 74333220 73747261 696e6964 2c207569 t32 strainid, ui\n+ 0x003fbcf8 6e743820 73657174 79706529 00000000 nt8 seqtype)....\n+ 0x003fbd08 54616720 6661696c 65643f21 3f0a0000 Tag failed?!?...\n+ 0x003fbd18 54797065 20414249 20534f4c 6944206e Type ABI SOLiD n\n+ 0x003fbd28 65656473 206d6f72 65207375 70706f72 eeds more suppor\n+ 0x003fbd38 74203131 2e000000 766f6964 20436f6e t 11....void Con\n+ 0x003fbd48 7469673a 3a6e6d70 725f6576 616c7561 tig::nmpr_evalua\n+ 0x003fbd58 74654f6e 65536571 54797065 28636f6e teOneSeqType(con\n+ 0x003fbd68 73742065 72636369 5f742026 20657263 st ercci_t & erc\n+ 0x003fbd78 63692c20 7374643a 3a766563 746f723c ci, std::vector<\n+ 0x003fbd88 7374643a 3a766563 746f723c 6e6e6772 std::vector > & grou\n+ 0x003fbda8 70735f73 742c206e 6e706f73 5f726570 ps_st, nnpos_rep\n+ 0x003fbdb8 5f636f6c 5f742026 206e6577 70726329 _col_t & newprc)\n+ 0x003fbdc8 00000000 54797065 20414249 20534f4c ....Type ABI SOL\n+ 0x003fbdd8 6944206e 65656473 206d6f72 65207375 iD needs more su\n+ 0x003fbde8 70706f72 74203130 2e000000 766f6964 pport 10....void\n+ 0x003fbdf8 20436f6e 7469673a 3a6e6d70 725f6361 Contig::nmpr_ca\n+ 0x003fbe08 7574696f 75734d75 6c746953 65715479 utiousMultiSeqTy\n+ 0x003fbe18 70655461 6767696e 6728636f 6e737420 peTagging(const \n+ 0x003fbe28 65726363 695f7420 26206572 6363692c ercci_t & ercci,\n+ 0x003fbe38 20636f6e 73742073 74643a3a 76656374 const std::vect\n+ 0x003fbe48 6f723c73 74643a3a 76656374 6f723c73 or > > & gro\n+ 0x003fbe78 7570735f 73745f73 742c2063 6f6e7374 ups_st_st, const\n+ 0x003fbe88 206e6e70 6f735f72 65705f63 6f6c5f74 nnpos_rep_col_t\n+ 0x003fbe98 20262065 6d707479 7072632c 20737464 & emptyprc, std\n+ 0x003fbea8 3a3a7665 63746f72 3c626f6f 6c3e2026 ::vector &\n+ 0x003fbeb8 20726561 64736d61 726b6564 73726d29 readsmarkedsrm)\n+ 0x003fbec8 00000000 4c6f6f6b 696e6720 666f7220 ....Looking for \n+ 0x003fbed8 62657374 2053524d 20667265 65207261 best SRM free ra\n+ 0x003fbee8 6e676520 696e2063 6f6e7469 67200000 nge in contig ..\n+ 0x003fbef8 4f6f6f70 7320666f 72206120 7461673f Ooops for a tag?\n+ 0x003fbf08 0a000000 61693a20 00000000 0a634166 ....ai: .....cAf\n+ 0x003fbf18 3a200000 09634172 3a200000 0a634366 : ...cAr: ...cCf\n+ 0x003fbf28 3a200000 09634372 3a200000 0a634766 : ...cCr: ...cGf\n+ 0x003fbf38 3a200000 09634772 3a200000 0a635466 : ...cGr: ...cTf\n+ 0x003fbf48 3a200000 09635472 3a200000 0a632a66 : ...cTr: ...c*f\n+ 0x003fbf58 3a200000 09632a72 3a200000 0a637465 : ...c*r: ...cte\n+ 0x003fbf68 2e66726f 6d200000 3c30207c 7c206374 .from ..<0 || ct\n+ 0x003fbf78 652e746f 20000000 203e3d43 4f4e5f63 e.to ... >=CON_c\n+ 0x003fbf88 6f756e74 732e7369 7a652829 20000000 ounts.size() ...\n+ 0x003fbf98 766f6964 20436f6e 7469673a 3a66696e void Contig::fin\n+ 0x003fbfa8 64426573 744e6f6e 4d697361 7373656d dBestNonMisassem\n+ 0x003fbfb8 626c6564 52616e67 65282900 52616e67 bledRange().Rang\n+ 0x003fbfc8 65200000 4c617267 65737420 4f4b3a20 e ..Largest OK: \n+ 0x003fbfd8 00000000 46756c6c 20636f6e 74696720 ....Full contig \n+ 0x003fbfe8 4f4b2e0a 00000000 766f6964 20436f6e OK......void Con\n+ 0x003fbff8 7469673a 3a747269 6d436f6e 74696754 tig::trimContigT\n+ 0x003fc008 6f52616e 67652875 696e7433 32206672 oRange(uint32 fr\n+ 0x003fc018 6f6d706f 732c2075 696e7433 3220746f ompos, uint32 to\n+ 0x003fc028 706f7329 00000000 626f6f6c 20436f6e pos)....bool Con\n+ 0x003fc038 7469673a 3a616e61 6c797365 524d425a tig::analyseRMBZ\n+ 0x003fc048 6f6e6573 28506c61 63656443 6f6e7469 ones(PlacedConti\n+ 0x003fc058 67526561 64733a3a 636f6e73 745f6974 gReads::const_it\n+ 0x003fc068 65726174 6f722070 63724929 00000000 erator pcrI)....\n+ 0x003fc078 6d617863 6f767065 72726561 642e7369 maxcovperread.si\n+ 0x003fc088 7a652829 20213d20 434f4e5f 72656164 ze() != CON_read\n+ 0x003fc098 706f6f6c 2d3e7369 7a652829 203f3f3f pool->size() ???\n+ 0x003fc0a8 00000000 766f6964 20436f6e 7469673a ....void Contig:\n+ 0x003fc0b8 3a616e61 6c797365 52656164 436f7665 :analyseReadCove\n+ 0x003fc0c8 72616765 28737464 3a3a7665 63746f72 rage(std::vector\n+ 0x003fc0d8 3c75696e 7433323e 2026206d 6178636f & maxco\n+ 0x003fc0e8 76290000 46636f6e 00000000 656e6472 v)..Fcon....endr\n+ 0x003fc0f8 6561646d 61726b65 78636c75 73696f6e eadmarkexclusion\n+ 0x003fc108 61726561 206d6179 206e6f74 20626520 area may not be \n+ 0x003fc118 3c203100 766f6964 20436f6e 7469673a < 1.void Contig:\n+ 0x003fc128 3a6e6d70 725f6669 72737466 696c6c69 :nmpr_firstfilli\n+ 0x003fc138 6e28636f 6e737420 65726363 695f7420 n(const ercci_t \n+ 0x003fc148 26206572 6363692c 20636f6e 73742073 & ercci, const s\n+ 0x003fc158 74643a3a 76656374 6f723c69 6e74383e td::vector\n+ 0x003fc168 2026206d 61736b73 6861646f 77290000 & maskshadow)..\n+ 0x003fc178 54797065 20414249 20534f4c 6944206e Type ABI SOLiD n\n+ 0x003fc188 65656473 206d6f72 65207375 70706f72 eeds more suppor\n+ 0x003fc198 74203132 612e0000 54797065 20414249 t 12a...Type ABI\n+ 0x003fc1a8 20534f4c 6944206e 65656473 206d6f72 SOLiD needs mor\n+ 0x003fc1b8 65207375 70706f72 74203134 2e000000 e support 14....\n+ 0x003fc1c8 54797065 20414249 20534f4c 6944206e Type ABI SOLiD n\n+ 0x003fc1d8 65656473 206d6f72 65207375 70706f72 eeds more suppor\n+ 0x003fc1e8 74203132 622e0000 766f6964 20436f6e t 12b...void Con\n+ 0x003fc1f8 7469673a 3a6e6d70 725f7261 74656772 tig::nmpr_rategr\n+ 0x003fc208 6f757073 28737464 3a3a7665 63746f72 oups(std::vector\n+ 0x003fc218 3c737464 3a3a7665 63746f72 3c737464 > > & \n+ 0x003fc248 67726f75 70735f73 745f7374 2c206363 groups_st_st, cc\n+ 0x003fc258 636f6e74 61696e65 725f743a 3a636f6e container_t::con\n+ 0x003fc268 73745f69 74657261 746f7220 63634929 st_iterator ccI)\n+ 0x003fc278 00000000 54797065 20414249 20534f4c ....Type ABI SOL\n+ 0x003fc288 6944206e 65656473 206d6f72 65207375 iD needs more su\n+ 0x003fc298 70706f72 74203132 632e0000 434f4e5f pport 12c...CON_\n+ 0x003fc2a8 72656164 706f6f6c 2d3e7369 7a652829 readpool->size()\n+ 0x003fc2b8 3d3d3020 3f3f3f00 766f6964 20436f6e ==0 ???.void Con\n+ 0x003fc2c8 7469673a 3a6e6577 4d61726b 506f7373 tig::newMarkPoss\n+ 0x003fc2d8 69626c65 52657065 61747328 636f6e73 ibleRepeats(cons\n+ 0x003fc2e8 74207569 6e743332 206e756d 73747261 t uint32 numstra\n+ 0x003fc2f8 696e7329 00000000 41434754 2a000000 ins)....ACGT*...\n+ 0x003fc308 65686868 68686868 202e2e2e 2e203f0a ehhhhhhh .... ?.\n+ 0x003fc318 00000000 6e6f2073 65712074 79706520 ....no seq type \n+ 0x003fc328 77697468 2076616c 69642067 726f7570 with valid group\n+ 0x003fc338 73206174 20746869 7320706c 6163653f s at this place?\n+ 0x003fc348 20496d70 6f737369 626c652e 00000000 Impossible.....\n+ 0x003fc358 53656172 6368696e 6720666f 723a2000 Searching for: .\n+ 0x003fc368 53524f73 20000000 554e5373 20000000 SROs ...UNSs ...\n+ 0x003fc378 49555041 43730000 2c207072 65706172 IUPACs.., prepar\n+ 0x003fc388 696e6720 6e656564 65642064 6174613a ing needed data:\n+ 0x003fc398 20736f72 74696e67 20746167 73202e2e sorting tags ..\n+ 0x003fc3a8 2e200000 646f6e65 00000000 66657463 . ..done....fetc\n+ 0x003fc3b8 68696e67 20636f6e 73656e73 75732066 hing consensus f\n+ 0x003fc3c8 6f722073 74726169 6e000000 28737472 or strain...(str\n+ 0x003fc3d8 61696e20 00000000 20656d70 74792e29 ain .... empty.)\n+ 0x003fc3e8 202e2e2e 00000000 646f6e65 2e0a5374 .......done..St\n+ 0x003fc3f8 61727469 6e672073 65617263 683a0000 arting search:..\n+ 0x003fc408 53747261 696e2027 00000000 273a2000 Strain '....': .\n+ 0x003fc418 4c6f7720 636f6e66 6964656e 63652062 Low confidence b\n+ 0x003fc428 61736520 64656669 6e697469 6f6e2000 ase definition .\n+ 0x003fc438 48696768 20636f6e 66696465 6e636520 High confidence \n+ 0x003fc448 00000000 4c6f7720 636f6e66 6964656e ....Low confiden\n+ 0x003fc458 63652000 4d656469 756d2063 6f6e6669 ce .Medium confi\n+ 0x003fc468 64656e63 65200000 76617269 616e7420 dence ..variant \n+ 0x003fc478 62657477 65656e20 27000000 2720616e between '...' an\n+ 0x003fc488 64202700 646f6e65 20776974 68207365 d '.done with se\n+ 0x003fc498 61726368 00000000 76656374 6f723a3a arch....vector::\n+ 0x003fc4a8 5f4d5f72 616e6765 5f696e73 65727400 _M_range_insert.\n+ 0x003fc4b8 4f6f6f6f 6f70733f 21206e75 6d737472 Ooooops?! numstr\n+ 0x003fc4c8 61696e73 77697468 67726f75 70733d3d ainswithgroups==\n+ 0x003fc4d8 303f0000 766f6964 20436f6e 7469673a 0?..void Contig:\n+ 0x003fc4e8 3a636f64 6f6e5369 6e676c65 42617365 :codonSingleBase\n+ 0x003fc4f8 52657065 61744d61 726b6572 2875696e RepeatMarker(uin\n+ 0x003fc508 74333220 6d696e67 726f7570 73697a65 t32 mingroupsize\n+ 0x003fc518 2c207265 70656174 6d61726b 65725f73 , repeatmarker_s\n+ 0x003fc528 74617473 5f742026 20726570 73746174 tats_t & repstat\n+ 0x003fc538 732c2073 74643a3a 76656374 6f723c62 s, std::vector & readsmark\n+ 0x003fc558 65647372 6d290000 696e6c69 6e652069 edsrm)..inline i\n+ 0x003fc568 6e743820 67657452 6561644f 52504944 nt8 getReadORPID\n+ 0x003fc578 41745552 44494428 696e7433 32207572 AtURDID(int32 ur\n+ 0x003fc588 64696429 20636f6e 73740000 696e6c69 did) const..inli\n+ 0x003fc598 6e652069 6e743820 67657452 65616444 ne int8 getReadD\n+ 0x003fc5a8 69726563 74696f6e 41745552 44494428 irectionAtURDID(\n+ 0x003fc5b8 696e7433 32207572 64696429 20636f6e int32 urdid) con\n+ 0x003fc5c8 73740000 75726469 64203e3d 20504352 st..urdid >= PCR\n+ 0x003fc5d8 5f616e63 696c6c61 7279696e 666f2e73 _ancillaryinfo.s\n+ 0x003fc5e8 697a6528 29203f3f 3f000000 76656374 ize() ???...vect\n+ 0x003fc5f8 6f723c62 6f6f6c3e 3a3a5f4d 5f696e73 or::_M_ins\n+ 0x003fc608 6572745f 61757800 496e7661 6c696420 ert_aux.Invalid \n+ 0x003fc618 2f204e6f 7420696e 69746961 6c697365 / Not initialise\n+ 0x003fc628 642e0a00 416c6967 6e656420 28312920 d...Aligned (1) \n+ 0x003fc638 53657131 20616e64 20283229 20536571 Seq1 and (2) Seq\n+ 0x003fc648 32207769 74682028 33292064 69666665 2 with (3) diffe\n+ 0x003fc658 72656e63 65206d6f 6e69746f 7220616e rence monitor an\n+ 0x003fc668 64202834 2920636f 6e73656e 7375733a d (4) consensus:\n+ 0x003fc678 0a000000 4e6f7420 65717561 6c2e0a00 ....Not equal...\n+ 0x003fc688 097c2020 20202e20 2020207c 20202020 .| . | \n+ 0x003fc698 2e202020 207c2020 20202e20 2020207c . | . |\n+ 0x003fc6a8 20202020 2e202020 207c2020 20202e20 . | . \n+ 0x003fc6b8 2020207c 20202020 2e202020 20000000 | . ...\n+ 0x003fc6c8 4944313a 00000000 4944323a 00000000 ID1:....ID2:....\n+ 0x003fc6d8 2d090000 43090000 43470900 41445320 -...C...CG..ADS \n+ 0x003fc6e8 6f626a65 63742061 70706172 656e746c object apparentl\n+ 0x003fc6f8 7920696e 20736176 654d656d 206d6f64 y in saveMem mod\n+ 0x003fc708 652c2063 616e6e6f 74207368 6f772061 e, cannot show a\n+ 0x003fc718 6c69676e 6d656e74 2e0a0000 4c656e31 lignment....Len1\n+ 0x003fc728 3a200000 4c656e32 3a200000 45787065 : ..Len2: ..Expe\n+ 0x003fc738 63746564 2053636f 72653a20 00000000 cted Score: ....\n+ 0x003fc748 53636f72 653a2000 57656967 68743a20 Score: .Weight: \n+ 0x003fc758 00000000 436f6e74 61696e65 643a2000 ....Contained: .\n+ 0x003fc768 4d69736d 61746368 65733a20 00000000 Mismatches: ....\n+ 0x003fc778 47617073 3a200000 4d617820 636f6e74 Gaps: ..Max cont\n+ 0x003fc788 6967756f 75732067 6170733a 20000000 iguous gaps: ...\n+ 0x003fc798 446f6e27 74207065 6e616c69 7365204e Don't penalise N\n+ 0x003fc7a8 2d676170 733a2000 204f626a 65637420 -gaps: . Object \n+ 0x003fc7b8 6e6f7420 696e6974 69616c69 7365642e not initialised.\n+ 0x003fc7c8 00000000 63686172 202a2067 6574416c ....char * getAl\n+ 0x003fc7d8 69676e65 64536571 75656e63 65287265 ignedSequence(re\n+ 0x003fc7e8 61646964 5f742069 64290000 20547269 adid_t id).. Tri\n+ 0x003fc7f8 65642074 6f206765 7420616c 69676e65 ed to get aligne\n+ 0x003fc808 64207365 7175656e 63657320 6f6e206f d sequences on o\n+ 0x003fc818 626a6563 74207768 65726520 73617665 bject where save\n+ 0x003fc828 4d656d28 29206861 64206265 656e2063 Mem() had been c\n+ 0x003fc838 616c6c65 64207072 6576696f 75736c79 alled previously\n+ 0x003fc848 21000000 4944206e 6f742069 6e20616c !...ID not in al\n+ 0x003fc858 69676e6d 656e742e 00000000 63686172 ignment.....char\n+ 0x003fc868 202a2067 65745365 7175656e 63654174 * getSequenceAt\n+ 0x003fc878 4f766572 6c617053 74617274 28726561 OverlapStart(rea\n+ 0x003fc888 6469645f 74206964 29000000 75696e74 did_t id)...uint\n+ 0x003fc898 33322067 65744c65 6e4f6641 6c69676e 32 getLenOfAlign\n+ 0x003fc8a8 65645365 7175656e 63652872 65616469 edSequence(readi\n+ 0x003fc8b8 645f7420 69642900 75696e74 33322041 d_t id).uint32 A\n+ 0x003fc8c8 6c69676e 65644475 616c5365 713a3a63 lignedDualSeq::c\n+ 0x003fc8d8 616c6345 6e64734c 656e436f 6e746967 alcEndsLenContig\n+ 0x003fc8e8 756f7573 4d617463 68282900 4144535f uousMatch().ADS_\n+ 0x003fc8f8 616c6967 6e65645f 73657131 3d3d6e75 aligned_seq1==nu\n+ 0x003fc908 6c6c7074 72203f3f 3f000000 4144535f llptr ???...ADS_\n+ 0x003fc918 616c6967 6e65645f 73657132 3d3d6e75 aligned_seq2==nu\n+ 0x003fc928 6c6c7074 72203f3f 3f000000 766f6964 llptr ???...void\n+ 0x003fc938 20416c69 676e6564 4475616c 5365713a AlignedDualSeq:\n+ 0x003fc948 3a736176 654d656d 28626f6f 6c206465 :saveMem(bool de\n+ 0x003fc958 6c657465 5f736571 2c20626f 6f6c2064 lete_seq, bool d\n+ 0x003fc968 656c6574 655f636f 6e737365 71290000 elete_consseq)..\n+ 0x003fc978 766f6964 20416c69 676e6564 4475616c void AlignedDual\n+ 0x003fc988 5365713a 3a636c69 70706572 28696e74 Seq::clipper(int\n+ 0x003fc998 33322077 696e6c65 6e2c2069 6e743332 32 winlen, int32\n+ 0x003fc9a8 206e756d 6572722c 20696e74 33322072 numerr, int32 r\n+ 0x003fc9b8 65747269 65732c20 696e7433 32202620 etries, int32 & \n+ 0x003fc9c8 72657467 6f6f646c 656e312c 20696e74 retgoodlen1, int\n+ 0x003fc9d8 33322026 20726574 676f6f64 6c656e32 32 & retgoodlen2\n+ 0x003fc9e8 2920636f 6e737400 20547269 65642074 ) const. Tried t\n+ 0x003fc9f8 6f207573 65206675 6e637469 6f6e206f o use function o\n+ 0x003fca08 6e206f62 6a656374 20776865 72652073 n object where s\n+ 0x003fca18 6176654d 656d2829 20686164 20626565 aveMem() had bee\n+ 0x003fca28 6e206361 6c6c6564 20707265 76696f75 n called previou\n+ 0x003fca38 736c7921 00000000 77696e6c 656e203d sly!....winlen =\n+ 0x003fca48 3d203020 3f000000 6c656e31 3d3d3020 = 0 ?...len1==0 \n+ 0x003fca58 3f206964 313d2000 20696432 3d200000 ? id1= . id2= ..\n+ 0x003fca68 766f6964 20414453 45737469 6d61746f void ADSEstimato\n+ 0x003fca78 723a3a63 616c634e 65774573 74696d61 r::calcNewEstima\n+ 0x003fca88 74652869 6e743332 206f6666 73657473 te(int32 offsets\n+ 0x003fca98 31746f73 322c2075 696e7433 32206c65 1tos2, uint32 le\n+ 0x003fcaa8 6e312c20 75696e74 3332206c 656e322c n1, uint32 len2,\n+ 0x003fcab8 20726561 6469645f 74206964 312c2072 readid_t id1, r\n+ 0x003fcac8 65616469 645f7420 6964322c 20696e74 eadid_t id2, int\n+ 0x003fcad8 38206964 31646972 2c20696e 74382069 8 id1dir, int8 i\n+ 0x003fcae8 64326469 72290000 6c656e32 3d3d3020 d2dir)..len2==0 \n+ 0x003fcaf8 3f206964 323d2000 20696431 3d200000 ? id2= . id1= ..\n+ 0x003fcb08 736f6d65 7468696e 67206973 20726561 something is rea\n+ 0x003fcb18 6c6c7920 77726f6e 67207769 74682074 lly wrong with t\n+ 0x003fcb28 68617420 41445345 21000000 6f666673 hat ADSE!...offs\n+ 0x003fcb38 65747331 746f7332 3e3d3020 2626206f ets1tos2>=0 && o\n+ 0x003fcb48 66667365 74733174 6f73323e 3d6c656e ffsets1tos2>=len\n+ 0x003fcb58 31203f00 6f666673 65747331 746f7332 1 ?.offsets1tos2\n+ 0x003fcb68 3c302026 26206162 73286f66 66736574 <0 && abs(offset\n+ 0x003fcb78 7331746f 7332293e 3d6c656e 32203f00 s1tos2)>=len2 ?.\n+ 0x003fcb88 41445345 5f6f7665 726c6170 6c656e3e ADSE_overlaplen>\n+ 0x003fcb98 41445345 5f746f74 616c6c65 6e000000 ADSE_totallen...\n+ 0x003fcba8 536f6d65 206f7468 65722072 6561736f Some other reaso\n+ 0x003fcbb8 6e202e2e 2e000000 206e6f74 20696e20 n ...... not in \n+ 0x003fcbc8 41445345 7374696d 61746f72 2e0a0000 ADSEstimator....\n+ 0x003fcbd8 75696e74 33322041 44534573 74696d61 uint32 ADSEstima\n+ 0x003fcbe8 746f723a 3a676574 45737469 6d617465 tor::getEstimate\n+ 0x003fcbf8 644c6566 74457870 616e6428 72656164 dLeftExpand(read\n+ 0x003fcc08 69645f74 20696429 20636f6e 73740000 id_t id) const..\n+ 0x003fcc18 75696e74 33322041 44534573 74696d61 uint32 ADSEstima\n+ 0x003fcc28 746f723a 3a676574 45737469 6d617465 tor::getEstimate\n+ 0x003fcc38 64526967 68744578 70616e64 28726561 dRightExpand(rea\n+ 0x003fcc48 6469645f 74206964 2920636f 6e737400 did_t id) const.\n+ 0x003fcc58 75696e74 33322041 44534573 74696d61 uint32 ADSEstima\n+ 0x003fcc68 746f723a 3a676574 4c656e28 72656164 tor::getLen(read\n+ 0x003fcc78 69645f74 20696429 20636f6e 73740000 id_t id) const..\n+ 0x003fcc88 696e7433 3220416c 69676e65 64447561 int32 AlignedDua\n+ 0x003fcc98 6c536571 3a3a7363 6f726528 626f6f6c lSeq::score(bool\n+ 0x003fcca8 20656e66 6f726365 5f636c65 616e5f65 enforce_clean_e\n+ 0x003fccb8 6e64732c 20626f6f 6c20646f 6e747065 nds, bool dontpe\n+ 0x003fccc8 6e616c69 73656e67 61707329 00000000 nalisengaps)....\n+ 0x003fccd8 20536571 75656e63 65206c65 6e677468 Sequence length\n+ 0x003fcce8 7320756e 65717561 6c3a2000 2076732e s unequal: . vs.\n+ 0x003fccf8 20000000 766f6964 20416c69 676e6564 ...void Aligned\n+ 0x003fcd08 4475616c 5365713a 3a616371 75697265 DualSeq::acquire\n+ 0x003fcd18 53657175 656e6365 7328636f 6e737420 Sequences(const \n+ 0x003fcd28 63686172 202a2073 6571312c 20636f6e char * seq1, con\n+ 0x003fcd38 73742063 68617220 2a207365 71322c20 st char * seq2, \n+ 0x003fcd48 72656164 69645f74 20696431 2c207265 readid_t id1, re\n+ 0x003fcd58 61646964 5f742069 64322c20 696e7438 adid_t id2, int8\n+ 0x003fcd68 20696431 6469722c 20696e74 38206964 id1dir, int8 id\n+ 0x003fcd78 32646972 2c20626f 6f6c2065 6e666f72 2dir, bool enfor\n+ 0x003fcd88 63655f63 6c65616e 5f656e64 732c2062 ce_clean_ends, b\n+ 0x003fcd98 6f6f6c20 646f6e74 70656e61 6c697365 ool dontpenalise\n+ 0x003fcda8 6e676170 732c2069 6e743332 2062616e ngaps, int32 ban\n+ 0x003fcdb8 64776964 74687573 65642c20 696e7433 dwidthused, int3\n+ 0x003fcdc8 32206d69 6e62616e 64646973 74616e63 2 minbanddistanc\n+ 0x003fcdd8 65290000 53657175 656e6365 206c656e e)..Sequence len\n+ 0x003fcde8 67746873 20303f00 416c6967 6e6d656e gths 0?.Alignmen\n+ 0x003fcdf8 74206f66 2074776f 20736571 75656e63 t of two sequenc\n+ 0x003fce08 65733a20 00000000 203e2036 35353330 es: .... > 65530\n+ 0x003fce18 20626173 65732c20 63616e6e 6f742068 bases, cannot h\n+ 0x003fce28 616e646c 652c2073 686f756c 646e2774 andle, shouldn't\n+ 0x003fce38 20686176 65206861 7070656e 65642100 have happened!.\n+ 0x003fce48 696e7438 20416c69 676e6564 4475616c int8 AlignedDual\n+ 0x003fce58 53657146 61637473 3a3a6765 74536571 SeqFacts::getSeq\n+ 0x003fce68 75656e63 65446972 65637469 6f6e2872 uenceDirection(r\n+ 0x003fce78 65616469 645f7420 69642920 636f6e73 eadid_t id) cons\n+ 0x003fce88 74000000 44697265 6374696f 6e313a20 t...Direction1: \n+ 0x003fce98 00000000 44697265 6374696f 6e323a20 ....Direction2: \n+ 0x003fcea8 00000000 44656c74 61205365 71322074 ....Delta Seq2 t\n+ 0x003fceb8 6f205365 71313a20 00000000 49443120 o Seq1: ....ID1 \n+ 0x003fcec8 72696768 74206465 6c74613a 20000000 right delta: ...\n+ 0x003fced8 49443220 72696768 74206465 6c74613a ID2 right delta:\n+ 0x003fcee8 20000000 49443120 35702063 6c65616e ...ID1 5p clean\n+ 0x003fcef8 3a200000 0a494431 20337020 636c6561 : ...ID1 3p clea\n+ 0x003fcf08 6e3a2000 0a494432 20357020 636c6561 n: ..ID2 5p clea\n+ 0x003fcf18 6e3a2000 0a494432 20337020 636c6561 n: ..ID2 3p clea\n+ 0x003fcf28 6e3a2000 4f766572 6c617020 6c656e67 n: .Overlap leng\n+ 0x003fcf38 74683a20 00000000 546f7461 6c206c65 th: ....Total le\n+ 0x003fcf48 6e677468 3a200000 53636f72 65207261 ngth: ..Score ra\n+ 0x003fcf58 74696f3a 20000000 75696e74 33322041 tio: ...uint32 A\n+ 0x003fcf68 44533a3a 6765744f 74686572 49442875 DS::getOtherID(u\n+ 0x003fcf78 72656164 69645f74 20696429 00000000 readid_t id)....\n+ 0x003fcf88 75696e74 33322041 6c69676e 65644475 uint32 AlignedDu\n+ 0x003fcf98 616c5365 71466163 74733a3a 6765744f alSeqFacts::getO\n+ 0x003fcfa8 66667365 74496e41 6c69676e 6d656e74 ffsetInAlignment\n+ 0x003fcfb8 28726561 6469645f 74206964 2920636f (readid_t id) co\n+ 0x003fcfc8 6e737400 75696e74 33322041 44533a3a nst.uint32 ADS::\n+ 0x003fcfd8 6765744f 66667365 74496e41 6c69676e getOffsetInAlign\n+ 0x003fcfe8 6d656e74 28726561 6469645f 74206964 ment(readid_t id\n+ 0x003fcff8 29000000 49442000 206e6f74 20696e20 )...ID . not in \n+ 0x003fd008 616c6967 6e6d656e 742e0000 75696e74 alignment...uint\n+ 0x003fd018 31362041 6c69676e 65644475 616c5365 16 AlignedDualSe\n+ 0x003fd028 71466163 74733a3a 67657452 69676874 qFacts::getRight\n+ 0x003fd038 44656c74 61287265 61646964 5f742069 Delta(readid_t i\n+ 0x003fd048 64292063 6f6e7374 00000000 414c5f76 d) const....AL_v\n+ 0x003fd058 616c6964 206e6f74 2076616c 69643f21 alid not valid?!\n+ 0x003fd068 0a000000 416c6967 6e0a2d2d 2d2d2d2d ....Align.------\n+ 0x003fd078 00000000 0a414c5f 6964313a 20000000 .....AL_id1: ...\n+ 0x003fd088 0a414c5f 6964323a 20000000 0a414c5f .AL_id2: ....AL_\n+ 0x003fd098 69643164 69723a20 00000000 0a414c5f id1dir: .....AL_\n+ 0x003fd0a8 69643264 69723a20 00000000 416c6967 id2dir: ....Alig\n+ 0x003fd0b8 6e207469 6d696e67 2044594e 20736571 n timing DYN seq\n+ 0x003fd0c8 63707920 3a200000 416c6967 6e207469 cpy : ..Align ti\n+ 0x003fd0d8 6d696e67 2044594e 20627377 20737520 ming DYN bsw su \n+ 0x003fd0e8 3a200000 416c6967 6e207469 6d696e67 : ..Align timing\n+ 0x003fd0f8 2044594e 20627377 20703120 3a200000 DYN bsw p1 : ..\n+ 0x003fd108 416c6967 6e207469 6d696e67 2044594e Align timing DYN\n+ 0x003fd118 20627377 20703261 3a200000 416c6967 bsw p2a: ..Alig\n+ 0x003fd128 6e207469 6d696e67 2044594e 20627377 n timing DYN bsw\n+ 0x003fd138 20703262 3a200000 416c6967 6e207469 p2b: ..Align ti\n+ 0x003fd148 6d696e67 2044594e 20627377 20703320 ming DYN bsw p3 \n+ 0x003fd158 3a200000 416c6967 6e207469 6d696e67 : ..Align timing\n+ 0x003fd168 2044594e 20627377 20636220 3a200000 DYN bsw cb : ..\n+ 0x003fd178 416c6967 6e207469 6d696e67 2044594e Align timing DYN\n+ 0x003fd188 20627377 20202020 3a200000 416c6967 bsw : ..Alig\n+ 0x003fd198 6e207469 6d696e67 20414c20 61637175 n timing AL acqu\n+ 0x003fd1a8 20732020 3a200000 416c6967 6e207469 s : ..Align ti\n+ 0x003fd1b8 6d696e67 20414c20 66756c6c 20202020 ming AL full \n+ 0x003fd1c8 3a200000 416c6967 6e207469 6d696e67 : ..Align timing\n+ 0x003fd1d8 20414c20 70726570 20202020 3a200000 AL prep : ..\n+ 0x003fd1e8 416c6967 6e207469 6d696e67 20414c20 Align timing AL \n+ 0x003fd1f8 72616c69 676e7420 3a200000 416c6967 ralignt : ..Alig\n+ 0x003fd208 6e207469 6d696e67 20414c20 72616c69 n timing AL rali\n+ 0x003fd218 676e6320 3a200000 416c6967 6e207469 gnc : ..Align ti\n+ 0x003fd228 6d696e67 20414c20 61647320 61202020 ming AL ads a \n+ 0x003fd238 3a200000 416c6967 6e207469 6d696e67 : ..Align timing\n+ 0x003fd248 20414c20 61647320 73202020 3a200000 AL ads s : ..\n+ 0x003fd258 3a205072 6f677261 6d6d696e 67206572 : Programming er\n+ 0x003fd268 726f722e 20547269 65642074 6f20616c ror. Tried to al\n+ 0x003fd278 69676e20 77697468 6f757420 70726f70 ign without prop\n+ 0x003fd288 65722069 6e697469 616c6973 6174696f er initialisatio\n+ 0x003fd298 6e206f66 20416c69 676e2d6f 626a6563 n of Align-objec\n+ 0x003fd2a8 742e0000 766f6964 20416c69 676e3a3a t...void Align::\n+ 0x003fd2b8 70726570 61726541 6c69676e 28737464 prepareAlign(std\n+ 0x003fd2c8 3a3a6c69 73743c41 6c69676e 65644475 ::list * adslist\n+ 0x003fd2e8 29000000 76733149 213d414c 5f726c65 )...vs1I!=AL_rle\n+ 0x003fd2f8 76312e63 656e6428 29000000 766f6964 v1.cend()...void\n+ 0x003fd308 20416c69 676e3a3a 72615f65 7870616e Align::ra_expan\n+ 0x003fd318 64524c45 416c6967 6e6d656e 74732863 dRLEAlignments(c\n+ 0x003fd328 6f6e7374 20636861 72202a20 73312c20 onst char * s1, \n+ 0x003fd338 636f6e73 74206368 6172202a 2073322c const char * s2,\n+ 0x003fd348 20626f6f 6c207368 616b6564 69727374 bool shakedirst\n+ 0x003fd358 646c6566 74290000 76733249 213d414c dleft)..vs2I!=AL\n+ 0x003fd368 5f726c65 76322e63 656e6428 29000000 _rlev2.cend()...\n+ 0x003fd378 616c6c65 6e3a3a20 00000000 3a20464f allen:: ....: FO\n+ 0x003fd388 4f4f4f4f 4f212e00 766f6964 20416c69 OOOOO!..void Ali\n+ 0x003fd398 676e3a3a 72416c69 676e2875 696e7433 gn::rAlign(uint3\n+ 0x003fd3a8 32206972 6f772c20 75696e74 3332206a 2 irow, uint32 j\n+ 0x003fd3b8 636f6c2c 20636861 72206c61 73746469 col, char lastdi\n+ 0x003fd3c8 722c2062 6f6f6c20 6861646e 29000000 r, bool hadn)...\n+ 0x003fd3d8 6c656674 20414c5f 6d696e62 616e6464 left AL_minbandd\n+ 0x003fd3e8 69737461 6e636520 00000000 203c2030 istance .... < 0\n+ 0x003fd3f8 203f3f3f 0a69726f 773a2000 206a636f ???.irow: . jco\n+ 0x003fd408 6c3a2000 206c6278 3a200000 72696768 l: . lbx: ..righ\n+ 0x003fd418 7420414c 5f6d696e 62616e64 64697374 t AL_minbanddist\n+ 0x003fd428 616e6365 20000000 20726278 3a200000 ance ... rbx: ..\n+ 0x003fd438 46756c6c 20616c69 676e2066 61696c65 Full align faile\n+ 0x003fd448 64210000 0a656e66 6f726365 5f636c65 d!...enforce_cle\n+ 0x003fd458 616e5f65 6e64733a 20000000 0a646f6e an_ends: ....don\n+ 0x003fd468 7470656e 616c6973 656e6761 70733a20 tpenalisengaps: \n+ 0x003fd478 00000000 766f6964 20416c69 676e3a3a ....void Align::\n+ 0x003fd488 66756c6c 416c6967 6e287374 643a3a6c fullAlign(std::l\n+ 0x003fd498 6973743c 416c6967 6e656444 75616c53 ist * adslist, b\n+ 0x003fd4b8 6f6f6c20 656e666f 7263655f 636c6561 ool enforce_clea\n+ 0x003fd4c8 6e5f656e 64732c20 626f6f6c 20646f6e n_ends, bool don\n+ 0x003fd4d8 7470656e 616c6973 656e6761 70732900 tpenalisengaps).\n+ 0x003fd4e8 35416c69 676e0000 09286578 63656c6c 5Align...(excell\n+ 0x003fd4f8 656e7429 00000000 0928796f 75206d69 ent).....(you mi\n+ 0x003fd508 67687420 77616e74 20746f20 63686563 ght want to chec\n+ 0x003fd518 6b207468 65736529 00000000 6373652e k these)....cse.\n+ 0x003fd528 69736c61 72676563 6f6e7469 673d3d30 islargecontig==0\n+ 0x003fd538 203f3f3f 00000000 75696e74 33322041 ???....uint32 A\n+ 0x003fd548 7373656d 626c7949 6e666f3a 3a68756e ssemblyInfo::hun\n+ 0x003fd558 74466f72 536d696c 65436f76 65726167 tForSmileCoverag\n+ 0x003fd568 65287374 643a3a73 7472696e 67202620 e(std::string & \n+ 0x003fd578 7761726e 74657874 29000000 2d200000 warntext)...- ..\n+ 0x003fd588 20636f6e 74696728 73292077 69746820 contig(s) with \n+ 0x003fd598 6120746f 74616c20 6f662000 20626173 a total of . bas\n+ 0x003fd5a8 65732028 3d200000 25206f66 20626173 es (= ..% of bas\n+ 0x003fd5b8 65732069 6e20616c 6c206e6f 6e2d7265 es in all non-re\n+ 0x003fd5c8 70657469 74697665 206c6172 67652063 petitive large c\n+ 0x003fd5d8 6f6e7469 67732920 68617665 20616e20 ontigs) have an \n+ 0x003fd5e8 61766572 61676520 636f7665 72616765 average coverage\n+ 0x003fd5f8 206c6573 73207468 616e2037 3525206f less than 75% o\n+ 0x003fd608 66207468 65206176 65726167 6520636f f the average co\n+ 0x003fd618 76657261 6765206f 6620616c 6c206e6f verage of all no\n+ 0x003fd628 6e2d7265 70657469 74697665 206c6172 n-repetitive lar\n+ 0x003fd638 67652063 6f6e7469 67732e0a 00000000 ge contigs......\n+ 0x003fd648 25206f66 20626173 65732069 6e20616c % of bases in al\n+ 0x003fd658 6c206e6f 6e2d7265 70657469 74697665 l non-repetitive\n+ 0x003fd668 20636f6e 74696773 29206861 76652061 contigs) have a\n+ 0x003fd678 6e206176 65726167 6520636f 76657261 n average covera\n+ 0x003fd688 6765206d 6f726520 7468616e 20313235 ge more than 125\n+ 0x003fd698 25206f66 20746865 20617665 72616765 % of the average\n+ 0x003fd6a8 20636f76 65726167 65206f66 20616c6c coverage of all\n+ 0x003fd6b8 206e6f6e 2d726570 65746974 69766520 non-repetitive \n+ 0x003fd6c8 6c617267 6520636f 6e746967 732e0a00 large contigs...\n+ 0x003fd6d8 25206f66 20626173 65732069 6e20616c % of bases in al\n+ 0x003fd6e8 6c206e6f 6e2d7265 70657469 74697665 l non-repetitive\n+ 0x003fd6f8 20636f6e 74696773 29206861 76652061 contigs) have a\n+ 0x003fd708 6e206176 65726167 6520636f 76657261 n average covera\n+ 0x003fd718 67652032 35252061 626f7665 206f7220 ge 25% above or \n+ 0x003fd728 62656c6f 77207468 65206176 65726167 below the averag\n+ 0x003fd738 6520636f 76657261 6765206f 6620616c e coverage of al\n+ 0x003fd748 6c206e6f 6e2d7265 70657469 74697665 l non-repetitive\n+ 0x003fd758 206c6172 67652063 6f6e7469 67732e0a large contigs..\n+ 0x003fd768 00000000 53756d6d 6172793a 20666f75 ....Summary: fou\n+ 0x003fd778 6e642000 20696e64 69636174 6f722873 nd . indicator(s\n+ 0x003fd788 2920666f 7220636f 76657261 67652070 ) for coverage p\n+ 0x003fd798 726f626c 656d2873 292e0a0a 49662074 roblem(s)...If t\n+ 0x003fd7a8 68652044 4e412079 6f752061 72652061 he DNA you are a\n+ 0x003fd7b8 7373656d 626c696e 67206973 20626163 ssembling is bac\n+ 0x003fd7c8 74657269 616c2c20 74686973 20636f75 terial, this cou\n+ 0x003fd7d8 6c642069 6e646963 61746520 74686174 ld indicate that\n+ 0x003fd7e8 20796f75 2073616d 706c6564 20616e64 you sampled and\n+ 0x003fd7f8 20736571 75656e63 65642044 4e412066 sequenced DNA f\n+ 0x003fd808 726f6d20 6578706f 6e656e74 69616c20 rom exponential \n+ 0x003fd818 6f72206c 61746520 6578706f 6e656e74 or late exponent\n+ 0x003fd828 69616c20 70686173 65206f66 20612062 ial phase of a b\n+ 0x003fd838 61637465 7269616c 20706f70 756c6174 acterial populat\n+ 0x003fd848 696f6e2e 20546869 73206c65 61647320 ion. This leads \n+ 0x003fd858 746f2061 20636f76 65726167 65206269 to a coverage bi\n+ 0x003fd868 61732074 6f776172 64207468 65206f72 as toward the or\n+ 0x003fd878 6967696e 206f6620 7265706c 69636174 igin of replicat\n+ 0x003fd888 696f6e2c 2068656e 63652066 616c7365 ion, hence false\n+ 0x003fd898 20706f73 69746976 65206465 74656374 positive detect\n+ 0x003fd8a8 696f6e20 6f662072 65706561 74732c20 ion of repeats, \n+ 0x003fd8b8 68656e63 6520616e 20617373 656d626c hence an assembl\n+ 0x003fd8c8 79207768 69636820 6973206d 6f726520 y which is more \n+ 0x003fd8d8 66726167 6d656e74 65642074 68616e20 fragmented than \n+ 0x003fd8e8 69742063 6f756c64 20626520 6f72206d it could be or m\n+ 0x003fd8f8 61792068 61766520 6d697361 7373656d ay have misassem\n+ 0x003fd908 626c6965 7320696e 20726567 696f6e73 blies in regions\n+ 0x003fd918 206c6f63 61746564 20746f77 61726420 located toward \n+ 0x003fd928 74686520 6f70706f 73697465 206f6620 the opposite of \n+ 0x003fd938 74686520 6f726967 696e206f 66207265 the origin of re\n+ 0x003fd948 706c6963 6174696f 6e2e0a4f 6e6c7920 plication..Only \n+ 0x003fd958 61766169 6c61626c 6520636f 756e7465 available counte\n+ 0x003fd968 726d6561 73757265 3a20666f 7220796f rmeasure: for yo\n+ 0x003fd978 7572206e 65787420 73657175 656e6369 ur next sequenci\n+ 0x003fd988 6e672070 726f6a65 63742c20 646f206e ng project, do n\n+ 0x003fd998 6f742073 616d706c 6520696e 20657870 ot sample in exp\n+ 0x003fd9a8 6f6e656e 7469616c 20706861 73652062 onential phase b\n+ 0x003fd9b8 75742073 616d706c 6520696e 20737461 ut sample in sta\n+ 0x003fd9c8 74696f6e 61727920 70686173 65202869 tionary phase (i\n+ 0x003fd9d8 6620706f 73736962 6c65292e 0a000000 f possible).....\n+ 0x003fd9e8 496c6c65 67616c20 73657175 656e6365 Illegal sequence\n+ 0x003fd9f8 20747970 653f0000 766f6964 20417373 type?..void Ass\n+ 0x003fda08 656d626c 79496e66 6f3a3a73 65744c61 emblyInfo::setLa\n+ 0x003fda18 72676543 6f6e7469 67436f76 50657253 rgeContigCovPerS\n+ 0x003fda28 54287569 6e743332 20636f76 2c207569 T(uint32 cov, ui\n+ 0x003fda38 6e743820 73657174 79706529 00000000 nt8 seqtype)....\n+ 0x003fda48 41737365 6d626c79 20696e66 6f726d61 Assembly informa\n+ 0x003fda58 74696f6e 3a0a0000 4d495241 20766572 tion:...MIRA ver\n+ 0x003fda68 73696f6e 3a200000 4e756d2e 20726561 sion: ..Num. rea\n+ 0x003fda78 64732061 7373656d 626c6564 3a200000 ds assembled: ..\n+ 0x003fda88 4e756d2e 2073696e 676c6574 733a2000 Num. singlets: .\n+ 0x003fda98 0a0a436f 76657261 67652061 73736573 ..Coverage asses\n+ 0x003fdaa8 736d656e 74202863 616c6375 6c617465 sment (calculate\n+ 0x003fdab8 64206672 6f6d2063 6f6e7469 6773203e d from contigs >\n+ 0x003fdac8 3d200000 20776974 6820636f 76657261 = .. with covera\n+ 0x003fdad8 6765203e 3d200000 293a0a3d 3d3d3d3d ge >= ..):.=====\n 0x003fdae8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x003fdaf8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x003fdb08 3d3d3d3d 3d3d3d3d 3d3d3d3d 0a000000 ============....\n- 0x003fdb18 20204176 672e2074 6f74616c 20636f76 Avg. total cov\n- 0x003fdb28 65726167 653a2000 0a202041 76672e20 erage: .. Avg. \n- 0x003fdb38 636f7665 72616765 20706572 20736571 coverage per seq\n- 0x003fdb48 75656e63 696e6720 74656368 6e6f6c6f uencing technolo\n- 0x003fdb58 67790000 0a0a0a4c 61726765 20636f6e gy.....Large con\n- 0x003fdb68 74696773 20286d61 6b657320 6c657373 tigs (makes less\n- 0x003fdb78 2073656e 73652066 6f722045 53542061 sense for EST a\n- 0x003fdb88 7373656d 626c6965 73293a0a 00000000 ssemblies):.....\n- 0x003fdb98 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003fdb08 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n+ 0x003fdb18 3d3d3d3d 0a000000 20204176 672e2074 ====.... Avg. t\n+ 0x003fdb28 6f74616c 20636f76 65726167 653a2000 otal coverage: .\n+ 0x003fdb38 0a202041 76672e20 636f7665 72616765 . Avg. coverage\n+ 0x003fdb48 20706572 20736571 75656e63 696e6720 per sequencing \n+ 0x003fdb58 74656368 6e6f6c6f 67790000 0a0a0a4c technology.....L\n+ 0x003fdb68 61726765 20636f6e 74696773 20286d61 arge contigs (ma\n+ 0x003fdb78 6b657320 6c657373 2073656e 73652066 kes less sense f\n+ 0x003fdb88 6f722045 53542061 7373656d 626c6965 or EST assemblie\n+ 0x003fdb98 73293a0a 00000000 3d3d3d3d 3d3d3d3d s):.....========\n 0x003fdba8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x003fdbb8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x003fdbc8 3d3d3d3d 0a576974 6809436f 6e746967 ====.With.Contig\n- 0x003fdbd8 2073697a 6509093e 3d200000 0a09414e size..>= ....AN\n- 0x003fdbe8 44202854 6f74616c 20617667 2e20436f D (Total avg. Co\n- 0x003fdbf8 76093e3d 20000000 0a092020 2020204f v.>= ..... O\n- 0x003fdc08 5220436f 76280000 29093e3d 20000000 R Cov(..).>= ...\n- 0x003fdc18 0a092020 2020290a 0a000000 0a416c6c .. )......All\n- 0x003fdc28 20636f6e 74696773 3a0a0000 20204c65 contigs:... Le\n- 0x003fdc38 6e677468 20617373 6573736d 656e743a ngth assessment:\n- 0x003fdc48 0a20202d 2d2d2d2d 2d2d2d2d 2d2d2d2d . -------------\n- 0x003fdc58 2d2d2d2d 2d0a0000 20204e75 6d626572 -----... Number\n- 0x003fdc68 206f6620 636f6e74 6967733a 09000000 of contigs:....\n- 0x003fdc78 0a202054 6f74616c 20636f6e 73656e73 . Total consens\n- 0x003fdc88 75733a09 00000000 0a20204c 61726765 us:...... Large\n- 0x003fdc98 73742063 6f6e7469 673a0900 0a20204e st contig:... N\n- 0x003fdca8 35302063 6f6e7469 67207369 7a653a09 50 contig size:.\n- 0x003fdcb8 00000000 0a20204e 39302063 6f6e7469 ..... N90 conti\n- 0x003fdcc8 67207369 7a653a09 00000000 0a20204e g size:...... N\n- 0x003fdcd8 39352063 6f6e7469 67207369 7a653a09 95 contig size:.\n- 0x003fdce8 00000000 0a0a2020 436f7665 72616765 ...... Coverage\n- 0x003fdcf8 20617373 6573736d 656e743a 0a20202d assessment:. -\n- 0x003fdd08 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n- 0x003fdd18 2d2d2d0a 00000000 20204d61 7820636f ---..... Max co\n- 0x003fdd28 76657261 67652028 746f7461 6c293a09 verage (total):.\n- 0x003fdd38 00000000 0a20204d 61782063 6f766572 ..... Max cover\n- 0x003fdd48 61676520 70657220 73657175 656e6369 age per sequenci\n- 0x003fdd58 6e672074 6563686e 6f6c6f67 79000000 ng technology...\n- 0x003fdd68 0a0a2020 5175616c 69747920 61737365 .. Quality asse\n- 0x003fdd78 73736d65 6e743a0a 20202d2d 2d2d2d2d ssment:. ------\n- 0x003fdd88 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d000000 -------------...\n- 0x003fdd98 0a202041 76657261 67652063 6f6e7365 . Average conse\n- 0x003fdda8 6e737573 20717561 6c697479 3a090909 nsus quality:...\n- 0x003fddb8 00000000 0a202043 6f6e7365 6e737573 ..... Consensus\n- 0x003fddc8 20626173 65732077 69746820 49555041 bases with IUPA\n- 0x003fddd8 433a0909 09000000 0a202053 74726f6e C:....... Stron\n- 0x003fdde8 6720756e 7265736f 6c766564 20726570 g unresolved rep\n- 0x003fddf8 65617420 706f7369 74696f6e 73202853 eat positions (S\n- 0x003fde08 524d6329 3a090000 0a202057 65616b20 RMc):.... Weak \n- 0x003fde18 756e7265 736f6c76 65642072 65706561 unresolved repea\n- 0x003fde28 7420706f 73697469 6f6e7320 2857524d t positions (WRM\n- 0x003fde38 63293a09 00000000 0a202053 65717565 c):...... Seque\n- 0x003fde48 6e63696e 67205479 7065204d 69736d61 ncing Type Misma\n- 0x003fde58 74636820 556e736f 6c766564 20285354 tch Unsolved (ST\n- 0x003fde68 4d55293a 09000000 0a202043 6f6e7469 MU):..... Conti\n- 0x003fde78 67732068 6176696e 67206f6e 6c792072 gs having only r\n- 0x003fde88 65616473 20776f20 7175616c 3a090900 eads wo qual:...\n- 0x003fde98 0a202043 6f6e7469 67732077 69746820 . Contigs with \n- 0x003fdea8 72656164 7320776f 20717561 6c207661 reads wo qual va\n- 0x003fdeb8 6c756573 3a090900 476f676f 3a206d61 lues:...Gogo: ma\n- 0x003fdec8 7070696e 67207768 61746576 6572206c pping whatever l\n- 0x003fded8 6566740a 00000000 476f676f 3a20636f eft.....Gogo: co\n- 0x003fdee8 656c2000 62666363 70310000 476f676f el .bfccp1..Gogo\n- 0x003fdef8 3a203130 3025206d 61707069 6e670a00 : 100% mapping..\n- 0x003fdf08 476f676f 3a206164 64206f74 68657273 Gogo: add others\n- 0x003fdf18 20636c65 616e2065 6e64730a 00000000 clean ends.....\n- 0x003fdf28 476f676f 3a206d61 7070696e 67203120 Gogo: mapping 1 \n- 0x003fdf38 6d69736d 61746368 0a000000 476f676f mismatch....Gogo\n- 0x003fdf48 3a206d61 7070696e 67203120 6761700a : mapping 1 gap.\n- 0x003fdf58 00000000 476f676f 3a206d61 7070696e ....Gogo: mappin\n- 0x003fdf68 67203220 6d69736d 61746368 65730a00 g 2 mismatches..\n- 0x003fdf78 476f676f 3a206d61 7070696e 67203120 Gogo: mapping 1 \n- 0x003fdf88 6761702c 2031206d 69736d61 7463680a gap, 1 mismatch.\n- 0x003fdf98 00000000 476f676f 3a206d61 7070696e ....Gogo: mappin\n- 0x003fdfa8 67203220 6572726f 72732028 3d3d7265 g 2 errors (==re\n- 0x003fdfb8 6d61696e 696e6720 32206761 70732028 maining 2 gaps (\n- 0x003fdfc8 616e6420 6d617962 65206e65 77206d69 and maybe new mi\n- 0x003fdfd8 736d6174 63686573 29290a00 476f676f smatches))..Gogo\n- 0x003fdfe8 3a206d61 7070696e 6720616c 6c200000 : mapping all ..\n- 0x003fdff8 20657272 6f72730a 00000000 70746372 errors.....ptcr\n- 0x003fe008 2041535f 75736564 5f696473 5b000000 AS_used_ids[...\n- 0x003fe018 5d3d0000 466f756e 64206964 783a2000 ]=..Found idx: .\n- 0x003fe028 54696d69 6e672042 46432075 6e757365 Timing BFC unuse\n- 0x003fe038 643a2000 43556e75 7365643a 20000000 d: .CUnused: ...\n- 0x003fe048 54556e75 7365643a 20000000 41535f75 TUnused: ...AS_u\n- 0x003fe058 7365645f 6964732e 73697a65 28293a20 sed_ids.size(): \n- 0x003fe068 00000000 20213d20 65787065 63746564 .... != expected\n- 0x003fe078 20000000 766f6964 20417373 656d626c ...void Assembl\n- 0x003fe088 793a3a62 66635f73 616e6974 79436865 y::bfc_sanityChe\n- 0x003fe098 636b4153 55534544 49445328 75696e74 ckASUSEDIDS(uint\n- 0x003fe0a8 3332206e 756d6578 70656374 65642900 32 numexpected).\n- 0x003fe0b8 0a0a4761 61616161 61686868 68686868 ..Gaaaaaahhhhhhh\n- 0x003fe0c8 68210a00 72756e49 2d3e7269 64312000 h!..runI->rid1 .\n- 0x003fe0d8 20213d20 6f727069 64200000 636f6e66 != orpid ..conf\n- 0x003fe0e8 65646765 732e7369 7a652829 20000000 edges.size() ...\n- 0x003fe0f8 72756e49 20646973 743a2000 72756e49 runI dist: .runI\n- 0x003fe108 202d3120 2d3e7269 64313a20 00000000 -1 ->rid1: ....\n- 0x003fe118 72756e49 2d3e7269 6431213d 6f727069 runI->rid1!=orpi\n- 0x003fe128 64202e2e 2e207265 616c6c79 3f3f3f00 d ... really???.\n- 0x003fe138 766f6964 20417373 656d626c 793a3a62 void Assembly::b\n- 0x003fe148 66635f73 61766550 65727369 7374656e fc_savePersisten\n- 0x003fe158 74536d61 6c6c4f76 65726c61 70732843 tSmallOverlaps(C\n- 0x003fe168 6f6e7469 67202620 74686973 636f6e2c ontig & thiscon,\n- 0x003fe178 20636f6e 73742069 6e743332 20706173 const int32 pas\n- 0x003fe188 736e722c 20737464 3a3a6f73 74726561 snr, std::ostrea\n- 0x003fe198 6d202620 666f7574 29000000 5f707265 m & fout)..._pre\n- 0x003fe1a8 7472696d 73726d00 73726d20 21204153 trimsrm.srm ! AS\n- 0x003fe1b8 5f757365 645f6964 735b2e2e 2e5d203f _used_ids[...] ?\n- 0x003fe1c8 3f3f0000 626f6f6c 20417373 656d626c ??..bool Assembl\n- 0x003fe1d8 793a3a62 66635f74 72696d44 656e6f76 y::bfc_trimDenov\n- 0x003fe1e8 6f49664e 65636573 73617279 28436f6e oIfNecessary(Con\n- 0x003fe1f8 74696720 26206275 696c6463 6f6e2c20 tig & buildcon, \n- 0x003fe208 626f6f6c 20666f75 6e645352 4d732c20 bool foundSRMs, \n- 0x003fe218 75696e74 33322026 20747261 636b696e uint32 & trackin\n- 0x003fe228 67756e75 73656429 00000000 4f6c6420 gunused)....Old \n- 0x003fe238 74726163 6b696e67 756e7573 65643a20 trackingunused: \n- 0x003fe248 00000000 496e7465 726d6564 69617465 ....Intermediate\n- 0x003fe258 20747261 636b696e 67756e75 7365643a trackingunused:\n- 0x003fe268 20000000 4e657720 74726163 6b696e67 ...New tracking\n- 0x003fe278 756e7573 65643a20 00000000 5f706f73 unused: ...._pos\n- 0x003fe288 74747269 6d73726d 00000000 466f756e ttrimsrm....Foun\n- 0x003fe298 64206d69 73617373 656d626c 79206279 d misassembly by\n- 0x003fe2a8 20706169 7220636f 6e736973 74656e63 pair consistenc\n- 0x003fe2b8 792e2042 65737420 72616e67 653a2000 y. Best range: .\n- 0x003fe2c8 5f707265 7472696d 70616972 00000000 _pretrimpair....\n- 0x003fe2d8 70616972 20636f6e 73697374 656e6379 pair consistency\n- 0x003fe2e8 20212041 535f7573 65645f69 64735b2e ! AS_used_ids[.\n- 0x003fe2f8 2e2e5d20 3f3f3f00 5f706f73 74747269 ..] ???._posttri\n- 0x003fe308 6d706169 72000000 5f707265 72656400 mpair..._prered.\n- 0x003fe318 5573696e 673a2000 436f7665 72616765 Using: .Coverage\n- 0x003fe328 72656d6f 76653a20 00000000 72657265 remove: ....rere\n- 0x003fe338 20212041 535f7573 65645f69 64735b72 ! AS_used_ids[r\n- 0x003fe348 69645d20 3f3f3f00 5f706f73 74726564 id] ???._postred\n- 0x003fe358 00000000 4d6f7669 6e672073 6d616c6c ....Moving small\n- 0x003fe368 20636c75 73746572 7320746f 20646562 clusters to deb\n- 0x003fe378 7269733a 0a000000 0a446f6e 652e2000 ris:.....Done. .\n- 0x003fe388 20726561 6473206d 6f766564 20746f20 reads moved to \n- 0x003fe398 64656272 69732e0a 00000000 094b6e6f debris.......Kno\n- 0x003fe3a8 776e2031 3a200000 69746572 20302c20 wn 1: ..iter 0, \n- 0x003fe3b8 50462069 6e697420 6e657720 636f6e74 PF init new cont\n- 0x003fe3c8 69670a00 69746572 206e2c20 6d617070 ig..iter n, mapp\n- 0x003fe3d8 696e672c 20504620 72657379 6e632063 ing, PF resync c\n- 0x003fe3e8 6f6e7469 670a0000 4b6e6f77 6e20323a ontig...Known 2:\n- 0x003fe3f8 20000000 61737365 6d626c79 6d6f6465 ...assemblymode\n- 0x003fe408 5f6d6170 70696e67 3a200000 6d617070 _mapping: ..mapp\n- 0x003fe418 696e6720 2620736f 6c657861 20626f6f ing & solexa boo\n- 0x003fe428 74737472 61700a00 4c6f6f6b 696e6720 tstrap..Looking \n- 0x003fe438 61742077 68617420 746f2074 68726f77 at what to throw\n- 0x003fe448 20617761 79202e2e 2e200000 73747269 away ... ..stri\n- 0x003fe458 7070696e 67202e2e 2e200000 646f6e65 pping ... ..done\n- 0x003fe468 2c206368 6f6d7069 6e67202e 2e2e2000 , chomping ... .\n- 0x003fe478 646f6e65 2c207379 6e636869 6e67202e done, synching .\n- 0x003fe488 2e2e2000 54552062 65666f72 65200000 .. .TU before ..\n- 0x003fe498 52494473 206b6e6f 776e2000 54552061 RIDs known .TU a\n- 0x003fe4a8 66746572 20000000 4b6e6f77 6e20333a fter ...Known 3:\n- 0x003fe4b8 20000000 62666363 70330000 6e6f2062 ...bfccp3..no b\n- 0x003fe4c8 66636370 33000000 54696d69 6e672042 fccp3...Timing B\n- 0x003fe4d8 46432070 61662063 6f6e7374 72756374 FC paf construct\n- 0x003fe4e8 3a200000 094b6e6f 776e2033 3a200000 : ...Known 3: ..\n- 0x003fe4f8 54726967 67657269 6e672061 64646974 Triggering addit\n- 0x003fe508 696f6e61 6c20636c 75737465 72206368 ional cluster ch\n- 0x003fe518 65636b3a 00000000 2073686f 756c646d eck:.... shouldm\n- 0x003fe528 6f766573 6d616c6c 636c7573 74657273 ovesmallclusters\n- 0x003fe538 746f6465 62726973 00000000 20737461 todebris.... sta\n- 0x003fe548 72744361 63686552 616e4472 79000000 rtCacheRanDry...\n- 0x003fe558 20737461 72744361 63686548 61735369 startCacheHasSi\n- 0x003fe568 6e676c65 74730000 4f6f6f6f 6f70732c nglets..Ooooops,\n- 0x003fe578 20726561 64206973 20696e20 636f6e74 read is in cont\n- 0x003fe588 69672062 7574206e 6f742075 7365643f ig but not used?\n- 0x003fe598 20000000 766f6964 20417373 656d626c ...void Assembl\n- 0x003fe5a8 793a3a62 66635f63 616c6c50 61746866 y::bfc_callPathf\n- 0x003fe5b8 696e6465 7228636f 6e737420 696e7433 inder(const int3\n- 0x003fe5c8 32207061 73736e72 2c20636f 6e737420 2 passnr, const \n- 0x003fe5d8 75696e74 33322069 7465722c 2075696e uint32 iter, uin\n- 0x003fe5e8 74333220 74726163 6b696e67 756e7573 t32 trackingunus\n- 0x003fe5f8 65642c20 626f6f6c 2073686f 756c646d ed, bool shouldm\n- 0x003fe608 6f766573 6d616c6c 636c7573 74657273 ovesmallclusters\n- 0x003fe618 746f6465 62726973 2c436f6e 74696720 todebris,Contig \n- 0x003fe628 26206275 696c6463 6f6e2c20 50506174 & buildcon, PPat\n- 0x003fe638 6866696e 64657220 26207161 66290000 hfinder & qaf)..\n- 0x003fe648 75736520 67656e65 72616c20 70617468 use general path\n- 0x003fe658 66696e64 65723a20 00000000 62666363 finder: ....bfcc\n- 0x003fe668 70320000 53746f72 696e6720 636f6e74 p2..Storing cont\n- 0x003fe678 6967202e 2e2e2000 5472616e 73666f72 ig ... .Transfor\n- 0x003fe688 6d696e67 20434552 206d6170 70696e67 ming CER mapping\n- 0x003fe698 732e0000 646f6e65 20747261 6e73666f s...done transfo\n- 0x003fe6a8 726d696e 67204345 52206d61 7070696e rming CER mappin\n- 0x003fe6b8 67732e00 5472616e 73666572 696e6720 gs..Transfering \n- 0x003fe6c8 74616773 20746f20 72656164 706f6f6c tags to readpool\n- 0x003fe6d8 2e0a0000 53617669 6e672043 4146202e ....Saving CAF .\n- 0x003fe6e8 2e2e2000 53617669 6e67204d 4146202e .. .Saving MAF .\n- 0x003fe6f8 2e2e2000 53617669 6e672067 61703420 .. .Saving gap4 \n- 0x003fe708 64697265 63742061 7373656d 626c7920 direct assembly \n- 0x003fe718 2e2e2e20 00000000 53617669 6e672073 ... ....Saving s\n- 0x003fe728 74726169 6e732061 73204641 53544120 trains as FASTA \n- 0x003fe738 2e2e2e20 00000000 53617669 6e672046 ... ....Saving F\n- 0x003fe748 41535441 202e2e2e 20000000 53617669 ASTA ... ...Savi\n- 0x003fe758 6e672054 4353202e 2e2e2000 53617669 ng TCS ... .Savi\n- 0x003fe768 6e672057 6967676c 65202e2e 2e200000 ng Wiggle ... ..\n- 0x003fe778 53617669 6e672074 65787420 2e2e2e20 Saving text ... \n- 0x003fe788 00000000 53617669 6e672041 4345202e ....Saving ACE .\n- 0x003fe798 2e2e2000 53617669 6e672048 544d4c20 .. .Saving HTML \n- 0x003fe7a8 2e2e2e20 00000000 53617669 6e672074 ... ....Saving t\n- 0x003fe7b8 656d7020 43414620 2e2e2e20 00000000 emp CAF ... ....\n- 0x003fe7c8 53617669 6e672074 656d7020 4d414620 Saving temp MAF \n- 0x003fe7d8 2e2e2e20 00000000 53617669 6e672074 ... ....Saving t\n- 0x003fe7e8 656d7020 67617034 20646972 65637420 emp gap4 direct \n- 0x003fe7f8 61737365 6d626c79 202e2e2e 20000000 assembly ... ...\n- 0x003fe808 53617669 6e672074 656d7020 46415354 Saving temp FAST\n- 0x003fe818 41202e2e 2e200000 53617669 6e672074 A ... ..Saving t\n- 0x003fe828 656d7020 74657874 202e2e2e 20000000 emp text ... ...\n- 0x003fe838 53617669 6e672074 656d7020 41434520 Saving temp ACE \n- 0x003fe848 2e2e2e20 00000000 53617669 6e672074 ... ....Saving t\n- 0x003fe858 656d7020 54435320 2e2e2e20 00000000 emp TCS ... ....\n- 0x003fe868 53617669 6e672074 656d7020 48544d4c Saving temp HTML\n- 0x003fe878 202e2e2e 20000000 53617669 6e672073 ... ...Saving s\n- 0x003fe888 656c6563 74656420 64656272 69732061 elected debris a\n- 0x003fe898 73207369 6e676c65 74733a0a 00000000 s singlets:.....\n- 0x003fe8a8 4246433a 20000000 5447533a 20000000 BFC: ...TGS: ...\n- 0x003fe8b8 6f766572 6c617063 6f6d7072 65737373 overlapcompresss\n- 0x003fe8c8 74657070 696e673a 20000000 0a6e6578 tepping: ....nex\n- 0x003fe8d8 746f7665 726c6170 636f6d70 72657373 toverlapcompress\n- 0x003fe8e8 3a200000 62666320 310a0000 62666320 : ..bfc 1...bfc \n- 0x003fe8f8 320a0000 54696d69 6e672042 46432070 2...Timing BFC p\n- 0x003fe908 72656c69 6d313a20 00000000 62666320 relim1: ....bfc \n- 0x003fe918 330a0000 62666320 340a0000 54696d69 3...bfc 4...Timi\n- 0x003fe928 6e672042 46432064 69736361 72642063 ng BFC discard c\n- 0x003fe938 6f6e3a20 00000000 2f6d6972 61746d70 on: ..../miratmp\n- 0x003fe948 2e706173 735f0000 5f636200 62666320 .pass_.._cb.bfc \n- 0x003fe958 350a0000 62666320 362f0000 62627265 5...bfc 6/..bbre\n- 0x003fe968 6275696c 64202120 41535f75 7365645f build ! AS_used_\n- 0x003fe978 6964735b 2e2e2e5d 203f3f3f 00000000 ids[...] ???....\n- 0x003fe988 766f6964 20417373 656d626c 793a3a62 void Assembly::b\n- 0x003fe998 75696c64 46697273 74436f6e 74696773 uildFirstContigs\n- 0x003fe9a8 28290000 54696d69 6e672042 46432063 ()..Timing BFC c\n- 0x003fe9b8 6f707920 6262636f 6e3a2000 72656769 opy bbcon: .regi\n- 0x003fe9c8 73746572 2041535f 75736564 5f696473 ster AS_used_ids\n- 0x003fe9d8 5b000000 5d3d3d00 54696d69 6e672042 [...]==.Timing B\n- 0x003fe9e8 46432062 62736574 75702072 656d6169 FC bbsetup remai\n- 0x003fe9f8 6e3a2000 62666320 372f0000 4275696c n: .bfc 7/..Buil\n- 0x003fea08 64696e67 206e6577 20636f6e 74696720 ding new contig \n- 0x003fea18 00000000 2066726f 6d206261 636b626f .... from backbo\n- 0x003fea28 6e652000 52656275 696c6469 6e672063 ne .Rebuilding c\n- 0x003fea38 6f6e7469 67200000 53657474 696e6720 ontig ..Setting \n- 0x003fea48 636f6e74 69672063 6f766572 61676520 contig coverage \n- 0x003fea58 74617267 65747320 746f3a20 00000000 targets to: ....\n- 0x003fea68 556e7573 65642072 65616473 3a200000 Unused reads: ..\n- 0x003fea78 62666320 382f0000 62666320 392f0000 bfc 8/..bfc 9/..\n- 0x003fea88 5741524e 494e4720 5741524e 494e4720 WARNING WARNING \n- 0x003fea98 5741524e 494e4721 206e6f20 72656164 WARNING! no read\n- 0x003feaa8 7320696e 20636f6e 7469673f 213f213f s in contig?!?!?\n- 0x003feab8 21000000 54696d69 6e672042 46432070 !...Timing BFC p\n- 0x003feac8 65727369 7374656e 7420736d 616c6c20 ersistent small \n- 0x003fead8 6f766572 6c617073 313a2000 44697363 overlaps1: .Disc\n- 0x003feae8 61726469 6e670000 4f6f6f6f 6f70732c arding..Ooooops,\n- 0x003feaf8 20726561 64206973 20616c72 65616479 read is already\n- 0x003feb08 20646562 7269733f 20000000 44656272 debris? ...Debr\n- 0x003feb18 69732066 726f6d20 616e2075 6e757365 is from an unuse\n- 0x003feb28 64207265 61642069 6e20636f 6e746967 d read in contig\n- 0x003feb38 3f200000 0a436f6e 74696720 646f6573 ? ...Contig does\n- 0x003feb48 206e6f74 206d6565 74207265 71756972 not meet requir\n- 0x003feb58 656d656e 74206f66 206d696e 696d756d ement of minimum\n- 0x003feb68 20726561 64732070 65722063 6f6e7469 reads per conti\n- 0x003feb78 672e0a4d 6f766564 20000000 20726561 g..Moved ... rea\n- 0x003feb88 64732074 6f206465 62726973 2e000000 ds to debris....\n- 0x003feb98 0a0a4669 6e697368 65642062 75696c64 ..Finished build\n- 0x003feba8 696e672e 00000000 41737365 6d626c65 ing.....Assemble\n- 0x003febb8 64207769 7468204d 49524100 43616c63 d with MIRA.Calc\n- 0x003febc8 756c6174 696e6720 73746174 69737469 ulating statisti\n- 0x003febd8 63732028 74686973 206d6179 2074616b cs (this may tak\n- 0x003febe8 65206120 7768696c 65292e00 54696d69 e a while)..Timi\n- 0x003febf8 6e672042 46432061 6e616c79 73657265 ng BFC analysere\n- 0x003fec08 6164636f 763a2000 54696d69 6e672042 adcov: .Timing B\n- 0x003fec18 46432063 6f757420 636f6e73 74617473 FC cout constats\n- 0x003fec28 3a200000 62666320 31302f00 70726500 : ..bfc 10/.pre.\n- 0x003fec38 50200000 2c206d61 726b6564 20000000 P .., marked ...\n- 0x003fec48 54696d69 6e672042 46432065 64697420 Timing BFC edit \n- 0x003fec58 74726963 6b79313a 20000000 54696d69 tricky1: ...Timi\n- 0x003fec68 6e672042 4643206d 61726b20 72657073 ng BFC mark reps\n- 0x003fec78 3a200000 62666320 31312f00 45646974 : ..bfc 11/.Edit\n- 0x003fec88 65642000 44656c65 74696e67 20737570 ed .Deleting sup\n- 0x003fec98 6572666c 756f7573 20676170 20636f6c erfluous gap col\n- 0x003feca8 756d6e73 20283129 202e2e2e 20000000 umns (1) ... ...\n- 0x003fecb8 646f6e65 2c206465 6c657465 64200000 done, deleted ..\n- 0x003fecc8 20636f6c 756d6e73 2e0a0000 54696d69 columns....Timi\n- 0x003fecd8 6e672042 46432065 64697420 74726963 ng BFC edit tric\n- 0x003fece8 6b79323a 20000000 0a456469 74656420 ky2: ....Edited \n- 0x003fecf8 00000000 20706f73 6974696f 6e732e0a .... positions..\n- 0x003fed08 00000000 44656c65 74696e67 20737570 ....Deleting sup\n- 0x003fed18 6572666c 756f7573 20676170 20636f6c erfluous gap col\n- 0x003fed28 756d6e73 20283229 202e2e2e 20000000 umns (2) ... ...\n- 0x003fed38 54696d69 6e672042 46432065 64697420 Timing BFC edit \n- 0x003fed48 73696e67 6c652064 69736372 6570616e single discrepan\n- 0x003fed58 63792c20 6e6f2048 41463a20 00000000 cy, no HAF: ....\n- 0x003fed68 62666320 31322f00 54696d69 6e672042 bfc 12/.Timing B\n- 0x003fed78 46432064 656c5053 48503a20 00000000 FC delPSHP: ....\n- 0x003fed88 62666320 31332f00 62666320 31342f00 bfc 13/.bfc 14/.\n- 0x003fed98 706f7374 34353400 706f7374 00000000 post454.post....\n- 0x003feda8 4e6f2065 64697420 616e6420 6e6f206e No edit and no n\n- 0x003fedb8 65772072 65706561 7420666f 756e642c ew repeat found,\n- 0x003fedc8 206e6f74 20736176 696e6720 65787472 not saving extr\n- 0x003fedd8 61207465 6d706f72 61727920 636f6e74 a temporary cont\n- 0x003fede8 69672061 6761696e 2e0a0000 62666320 ig again....bfc \n- 0x003fedf8 31352f00 62666320 31362f00 20547261 15/.bfc 16/. Tra\n- 0x003fee08 6e736665 72696e67 20726561 64207461 nsfering read ta\n- 0x003fee18 67732074 6f207265 6164706f 6f6c2e00 gs to readpool..\n- 0x003fee28 54696d69 6e672042 46432072 70207472 Timing BFC rp tr\n- 0x003fee38 616e7366 65723a20 00000000 54696d69 ansfer: ....Timi\n- 0x003fee48 6e672042 46432063 72746167 32727020 ng BFC crtag2rp \n- 0x003fee58 7472616e 73666572 3a200000 446f6e65 transfer: ..Done\n- 0x003fee68 2e000000 62666320 31372f00 49206861 ....bfc 17/.I ha\n- 0x003fee78 7665206e 65777265 70746d61 726b6564 ve newreptmarked\n- 0x003fee88 20000000 20776173 6d616a6f 726f7665 ... wasmajorove\n- 0x003fee98 7263616c 6c656469 74656420 00000000 rcalledited ....\n- 0x003feea8 20636f6e 7469676e 6f746f6b 20000000 contignotok ...\n- 0x003feeb8 09636f6e 74696e75 65697465 723a2000 .continueiter: .\n- 0x003feec8 4964656e 74696669 6564206d 69736173 Identified misas\n- 0x003feed8 73656d62 6c656420 72656164 7320696e sembled reads in\n- 0x003feee8 20636f6e 7469672e 0a000000 48616420 contig.....Had \n- 0x003feef8 6d616e79 206f7665 7263616c 6c206564 many overcall ed\n- 0x003fef08 69747320 696e2072 65616473 2e0a0000 its in reads....\n- 0x003fef18 48617320 6261636b 626f6e65 732c206e Has backbones, n\n- 0x003fef28 6f206164 64697469 6f6e616c 20697465 o additional ite\n- 0x003fef38 72617469 6f6e2061 6c6c6f77 65642e0a ration allowed..\n- 0x003fef48 00000000 4e656564 20746f20 6c6f6f70 ....Need to loop\n- 0x003fef58 20636f6e 74696720 6275696c 64696e67 contig building\n- 0x003fef68 0a000000 49746572 6174696f 6e207769 ....Iteration wi\n- 0x003fef78 6c6c206e 756b6520 636f6e74 69672062 ll nuke contig b\n- 0x003fef88 75696c74 20736f20 6661722e 0a000000 uilt so far.....\n- 0x003fef98 49746572 6174696f 6e207769 6c6c206b Iteration will k\n- 0x003fefa8 65657020 636f6e74 69672062 75696c74 eep contig built\n- 0x003fefb8 20736f20 6661722e 0a000000 62666320 so far.....bfc \n- 0x003fefc8 31380a00 54696d69 6e672042 4643206d 18..Timing BFC m\n- 0x003fefd8 61726b72 65702064 7572696e 67207374 arkrep during st\n- 0x003fefe8 6f72653a 20000000 0a416363 65707469 ore: ....Accepti\n- 0x003feff8 6e672070 726f6261 626c7920 6d697361 ng probably misa\n- 0x003ff008 7373656d 626c6564 20636f6e 7469672c ssembled contig,\n- 0x003ff018 20000000 20627574 206b6570 74206f6e ... but kept on\n- 0x003ff028 6c792062 6573742c 206e6f6e 2d70726f ly best, non-pro\n- 0x003ff038 626c656d 61746963 20706172 742e0a00 blematic part...\n- 0x003ff048 206b6565 70696e67 20617320 69732e0a keeping as is..\n- 0x003ff058 00000000 62666320 31390a00 54696d69 ....bfc 19..Timi\n- 0x003ff068 6e672042 46432070 65727369 7374656e ng BFC persisten\n- 0x003ff078 7420736d 616c6c20 6f766572 6c617073 t small overlaps\n- 0x003ff088 323a2000 62666320 32300a00 54696d69 2: .bfc 20..Timi\n- 0x003ff098 6e672042 46432073 746f7265 20636f6e ng BFC store con\n- 0x003ff0a8 3a200000 436f6e74 69672063 6f766572 : ..Contig cover\n- 0x003ff0b8 61676520 616e616c 79736973 20000000 age analysis ...\n- 0x003ff0c8 28746869 73206d61 79207461 6b652061 (this may take a\n- 0x003ff0d8 20776869 6c652920 00000000 4c617374 while) ....Last\n- 0x003ff0e8 20626163 6b626f6e 65206d61 70706564 backbone mapped\n- 0x003ff0f8 2c206e6f 74206275 696c6469 6e67206e , not building n\n- 0x003ff108 6577206f 6e65732e 0a4d6f76 65642000 ew ones..Moved .\n- 0x003ff118 2072656d 61696e69 6e672072 65616473 remaining reads\n- 0x003ff128 20746f20 64656272 69732e0a 00000000 to debris......\n- 0x003ff138 54696d69 6e672042 4643206c 6f6f7020 Timing BFC loop \n- 0x003ff148 746f7461 6c3a2000 54686572 65206172 total: .There ar\n- 0x003ff158 65200000 206f6620 796f7572 20726561 e .. of your rea\n- 0x003ff168 64732028 7e000000 25292064 65636c61 ds (~...%) decla\n- 0x003ff178 72656420 6173206d 65676168 75627320 red as megahubs \n- 0x003ff188 28746f6f 206d616e 7920706f 73736962 (too many possib\n- 0x003ff198 6c652063 6f6e6e65 6374696f 6e732074 le connections t\n- 0x003ff1a8 6f206f74 68657220 72656164 73292061 o other reads) a\n- 0x003ff1b8 6e642077 68657265 20746865 20534b49 nd where the SKI\n- 0x003ff1c8 4d206661 7374206f 7665726c 61702066 M fast overlap f\n- 0x003ff1d8 696e6465 72206469 64206e6f 74207265 inder did not re\n- 0x003ff1e8 7475726e 20656e6f 75676820 72657375 turn enough resu\n- 0x003ff1f8 6c74732e 0a496620 796f7520 77616e74 lts..If you want\n- 0x003ff208 2074686f 73652072 65616473 20746f20 those reads to \n- 0x003ff218 62652066 6f756e64 2028616e 64207375 be found (and su\n- 0x003ff228 62736571 75656e74 6c792061 7373656d bsequently assem\n- 0x003ff238 626c6564 292c2079 6f75206e 65656420 bled), you need \n- 0x003ff248 746f2065 69746865 720a2d20 73776974 to either.- swit\n- 0x003ff258 6368206f 66662066 696c7465 72696e67 ch off filtering\n- 0x003ff268 206f6620 6d656761 68756273 20282d53 of megahubs (-S\n- 0x003ff278 4b3a666d 683d6e6f 290a2d20 696e6372 K:fmh=no).- incr\n- 0x003ff288 65617365 20746865 2073697a 65206f66 ease the size of\n- 0x003ff298 20746865 206d6567 61687562 20636170 the megahub cap\n- 0x003ff2a8 20282d53 4b3a6d68 633d2e2e 2e290a42 (-SK:mhc=...).B\n- 0x003ff2b8 65776172 6521204d 65676168 75627320 eware! Megahubs \n- 0x003ff2c8 61726520 74686520 66697273 74206465 are the first de\n- 0x003ff2d8 66656e73 65206d65 6368616e 69736d20 fense mechanism \n- 0x003ff2e8 6f66204d 49524120 746f206b 65657020 of MIRA to keep \n- 0x003ff2f8 61737365 6d626c79 2074696d 65732072 assembly times r\n- 0x003ff308 6561736f 6e61626c 652e0000 20466f72 easonable... For\n- 0x003ff318 74756e61 74656c79 2c207468 65206e75 tunately, the nu\n- 0x003ff328 6d626572 206f6620 6d656775 68627320 mber of meguhbs \n- 0x003ff338 6973206c 6f772065 6e6f7567 6820746f is low enough to\n- 0x003ff348 20736166 656c7920 73776974 6368206f safely switch o\n- 0x003ff358 66662066 696c7465 72696e67 2e000000 ff filtering....\n- 0x003ff368 20576974 68207468 6973206e 756d6265 With this numbe\n- 0x003ff378 72206f66 206d6567 61687562 732c2074 r of megahubs, t\n- 0x003ff388 68652061 7373656d 626c7920 69732065 he assembly is e\n- 0x003ff398 78706563 74656420 746f2000 74616b65 xpected to .take\n- 0x003ff3a8 20612063 6f75706c 65206f66 206d696e a couple of min\n- 0x003ff3b8 75746573 206c6f6e 67657220 70657220 utes longer per \n- 0x003ff3c8 70617373 2c207377 69746368 696e6720 pass, switching \n- 0x003ff3d8 6f666620 66696c74 6572696e 67207368 off filtering sh\n- 0x003ff3e8 6f756c64 20626520 4f4b2e00 74616b65 ould be OK..take\n- 0x003ff3f8 20736f6d 65203330 206d696e 75746573 some 30 minutes\n- 0x003ff408 20746f20 3120686f 7572206c 6f6e6765 to 1 hour longe\n- 0x003ff418 72207065 72207061 73732077 68656e20 r per pass when \n- 0x003ff428 73776974 6368696e 67206f66 66206669 switching off fi\n- 0x003ff438 6c746572 696e672c 20696620 796f7520 ltering, if you \n- 0x003ff448 77616e74 20746f20 77616974 20666f72 want to wait for\n- 0x003ff458 20746861 742c204f 4b2e0000 74616b65 that, OK...take\n- 0x003ff468 20736f6d 65203120 746f2035 20686f75 some 1 to 5 hou\n- 0x003ff478 7273206c 6f6e6765 72207065 72207061 rs longer per pa\n- 0x003ff488 73732077 68656e20 73776974 6368696e ss when switchin\n- 0x003ff498 67206f66 66206669 6c746572 696e672c g off filtering,\n- 0x003ff4a8 20746861 74206361 6e206765 74206c6f that can get lo\n- 0x003ff4b8 6e672e00 74616b65 203e3d20 3520686f ng..take >= 5 ho\n- 0x003ff4c8 75727320 746f2073 65766572 616c2064 urs to several d\n- 0x003ff4d8 61797320 6c6f6e67 65722070 65722070 ays longer per p\n- 0x003ff4e8 61737320 7768656e 20737769 74636869 ass when switchi\n- 0x003ff4f8 6e67206f 66662066 696c7465 72696e67 ng off filtering\n- 0x003ff508 2c206f6e 6c792066 6f722064 69652d68 , only for die-h\n- 0x003ff518 61726473 2e000000 554e4153 53454d42 ards....UNASSEMB\n- 0x003ff528 4c45445f 4d454741 48554253 00000000 LED_MEGAHUBS....\n- 0x003ff538 4d656761 68756220 72656164 73206c61 Megahub reads la\n- 0x003ff548 6e646564 20696e20 64656272 69732066 nded in debris f\n- 0x003ff558 696c6500 25292063 6f6e7461 696e696e ile.%) containin\n- 0x003ff568 6720736f 206d616e 79206261 73657320 g so many bases \n- 0x003ff578 6d61736b 65642061 73206e61 73747920 masked as nasty \n- 0x003ff588 72657065 61747320 74686174 20746865 repeats that the\n- 0x003ff598 20534b49 4d206661 7374206f 7665726c SKIM fast overl\n- 0x003ff5a8 61702066 696e6465 72206469 64206e6f ap finder did no\n- 0x003ff5b8 74207265 7475726e 20656e6f 75676820 t return enough \n- 0x003ff5c8 72657375 6c74732e 0a496620 796f7520 results..If you \n- 0x003ff5d8 77616e74 2074686f 73652072 65616473 want those reads\n- 0x003ff5e8 20746f20 62652066 6f756e64 2028616e to be found (an\n- 0x003ff5f8 64207375 62736571 75656e74 6c792061 d subsequently a\n- 0x003ff608 7373656d 626c6564 292c2079 6f75206e ssembled), you n\n- 0x003ff618 65656420 746f2065 69746865 720a2d20 eed to either.- \n- 0x003ff628 73776974 6368206f 6666206d 61736b69 switch off maski\n- 0x003ff638 6e67206f 66206e61 73747920 72657065 ng of nasty repe\n- 0x003ff648 61747320 282d4853 3a6d6e72 3d6e6f29 ats (-HS:mnr=no)\n- 0x003ff658 0a2d2069 6e637265 61736520 74686520 .- increase the \n- 0x003ff668 74686520 6e617374 79207265 70656174 the nasty repeat\n- 0x003ff678 20726174 696f2028 2d48533a 6e72723d ratio (-HS:nrr=\n- 0x003ff688 2e2e2e29 2028636f 6e73756c 74207468 ...) (consult th\n- 0x003ff698 65206861 73682073 74617469 73746963 e hash statistic\n- 0x003ff6a8 7320696e 20746865 206f7574 70757420 s in the output \n- 0x003ff6b8 6c6f6720 6f66204d 49524120 746f2066 log of MIRA to f\n- 0x003ff6c8 696e6420 6120676f 6f64206f 6e652900 ind a good one).\n- 0x003ff6d8 0a2d2061 7320796f 7520646f 20455354 .- as you do EST\n- 0x003ff6e8 2f524e41 53657120 61737365 6d626c79 /RNASeq assembly\n- 0x003ff6f8 2c206c6f 73736c65 73732064 69676974 , lossless digit\n- 0x003ff708 616c206e 6f726d61 6c697361 74696f6e al normalisation\n- 0x003ff718 20282d48 533a6c64 6e3d7965 7329206d (-HS:ldn=yes) m\n- 0x003ff728 61792061 6c736f20 62652061 6e206f70 ay also be an op\n- 0x003ff738 74696f6e 00000000 2c206275 7420796f tion...., but yo\n- 0x003ff748 7520616c 72656164 79206861 64206974 u already had it\n- 0x003ff758 206f6e00 0a426577 61726521 204d6173 on..Beware! Mas\n- 0x003ff768 6b696e67 206f6620 6e617374 79207265 king of nasty re\n- 0x003ff778 70656174 73206973 20746865 20736563 peats is the sec\n- 0x003ff788 6f6e6420 64656665 6e736520 6d656368 ond defense mech\n- 0x003ff798 616e6973 6d206f66 204d4952 41202861 anism of MIRA (a\n- 0x003ff7a8 66746572 206d6567 61687562 73292074 fter megahubs) t\n- 0x003ff7b8 6f206b65 65702061 7373656d 626c7920 o keep assembly \n- 0x003ff7c8 74696d65 73207265 61736f6e 61626c65 times reasonable\n- 0x003ff7d8 2e204368 616e6769 6e672074 68652064 . Changing the d\n- 0x003ff7e8 65666175 6c747320 77696c6c 20696e63 efaults will inc\n- 0x003ff7f8 72656173 65207468 65207469 6d65206e rease the time n\n- 0x003ff808 65656465 642e0000 20466f72 74756e61 eeded... Fortuna\n- 0x003ff818 74656c79 2c207468 65206e75 6d626572 tely, the number\n- 0x003ff828 206f6620 636f6d70 6c657465 6c79206d of completely m\n- 0x003ff838 61736b65 64207265 61647320 6973206c asked reads is l\n- 0x003ff848 6f772065 6e6f7567 6820746f 20736166 ow enough to saf\n- 0x003ff858 656c7920 73776974 6368206f 6666206d ely switch off m\n- 0x003ff868 61736b69 6e672e00 20576974 68207468 asking.. With th\n- 0x003ff878 6973206e 756d6265 72206f66 206d6173 is number of mas\n- 0x003ff888 6b656420 72656164 732c2074 68652061 ked reads, the a\n- 0x003ff898 7373656d 626c7920 69732065 78706563 ssembly is expec\n- 0x003ff8a8 74656420 746f2000 74616b65 20612063 ted to .take a c\n- 0x003ff8b8 6f75706c 65206f66 206d696e 75746573 ouple of minutes\n- 0x003ff8c8 206c6f6e 67657220 70657220 70617373 longer per pass\n- 0x003ff8d8 2c207377 69746368 696e6720 6f666620 , switching off \n- 0x003ff8e8 6d61736b 696e6720 73686f75 6c642062 masking should b\n- 0x003ff8f8 65204f4b 2e000000 74616b65 20736f6d e OK....take som\n- 0x003ff908 65203330 206d696e 75746573 20746f20 e 30 minutes to \n- 0x003ff918 3120686f 7572206c 6f6e6765 72207065 1 hour longer pe\n- 0x003ff928 72207061 73732077 68656e20 73776974 r pass when swit\n- 0x003ff938 6368696e 67206f66 66206d61 736b696e ching off maskin\n- 0x003ff948 672c2069 6620796f 75207761 6e742074 g, if you want t\n- 0x003ff958 6f207761 69742066 6f722074 6861742c o wait for that,\n- 0x003ff968 204f4b2e 00000000 74616b65 20736f6d OK.....take som\n- 0x003ff978 65203120 746f2035 20686f75 7273206c e 1 to 5 hours l\n- 0x003ff988 6f6e6765 72207065 72207061 73732077 onger per pass w\n- 0x003ff998 68656e20 73776974 6368696e 67206f66 hen switching of\n- 0x003ff9a8 66206d61 736b696e 672c2074 68617420 f masking, that \n- 0x003ff9b8 63616e20 67657420 6c6f6e67 2e000000 can get long....\n- 0x003ff9c8 74616b65 203e3d20 3520686f 75727320 take >= 5 hours \n- 0x003ff9d8 746f2073 65766572 616c2064 61797320 to several days \n- 0x003ff9e8 6c6f6e67 65722070 65722070 61737320 longer per pass \n- 0x003ff9f8 7768656e 20737769 74636869 6e67206f when switching o\n- 0x003ffa08 6666206d 61736b69 6e672c20 6f6e6c79 ff masking, only\n- 0x003ffa18 20666f72 20646965 2d686172 64732e00 for die-hards..\n- 0x003ffa28 554e4153 53454d42 4c45445f 4e415354 UNASSEMBLED_NAST\n- 0x003ffa38 59524550 45415453 00000000 52656164 YREPEATS....Read\n- 0x003ffa48 73207769 7468206d 61736b65 64206e61 s with masked na\n- 0x003ffa58 73747920 72657065 61747320 6c616e64 sty repeats land\n- 0x003ffa68 65642069 6e206465 62726973 2066696c ed in debris fil\n- 0x003ffa78 65000000 0a427569 6c647374 61747320 e....Buildstats \n- 0x003ffa88 2d20524d 20706f73 6974696f 6e732020 - RM positions \n- 0x003ffa98 20202020 20203a09 00000000 0a427569 :......Bui\n- 0x003ffaa8 6c647374 61747320 2d206f76 65726361 ldstats - overca\n- 0x003ffab8 6c6c2065 64697473 20202020 20203a09 ll edits :.\n- 0x003ffac8 00000000 0a427569 6c647374 61747320 .....Buildstats \n- 0x003ffad8 2d206861 73682065 64697473 20202020 - hash edits \n- 0x003ffae8 20202020 20203a09 00000000 0a427569 :......Bui\n- 0x003ffaf8 6c647374 61747320 2d20636f 6e746967 ldstats - contig\n- 0x003ffb08 20646973 61737365 6d626c69 65733a09 disassemblies:.\n- 0x003ffb18 00000000 53657474 696e6720 636f7665 ....Setting cove\n- 0x003ffb28 72616765 20616e61 6c797369 73207661 rage analysis va\n- 0x003ffb38 6c756573 20666f72 20756e69 666f726d lues for uniform\n- 0x003ffb48 20726561 64206469 73747269 62757469 read distributi\n- 0x003ffb58 6f6e3a0a 00000000 20636f76 65726167 on:..... coverag\n- 0x003ffb68 653a0900 4461726e 2c206572 726f7220 e:..Darn, error \n- 0x003ffb78 77697468 20746861 7420636f 6e746967 with that contig\n- 0x003ffb88 2e205365 65206461 726e2e66 61737461 . See darn.fasta\n- 0x003ffb98 2e0a0000 78787878 78787878 78787878 ....xxxxxxxxxxxx\n- 0x003ffba8 206d6172 6b200000 626f6f6c 20626f6f mark ..bool boo\n- 0x003ffbb8 73743a3a 72655f64 65746169 6c5f3130 st::re_detail_10\n- 0x003ffbc8 37343030 3a3a7065 726c5f6d 61746368 7400::perl_match\n- 0x003ffbd8 65723c42 69646949 74657261 746f722c er::unwind_fast\n- 0x003ffc08 5f646f74 5f726570 65617428 626f6f6c _dot_repeat(bool\n- 0x003ffc18 29205b77 69746820 42696469 49746572 ) [with BidiIter\n- 0x003ffc28 61746f72 203d205f 5f676e75 5f637878 ator = __gnu_cxx\n- 0x003ffc38 3a3a5f5f 6e6f726d 616c5f69 74657261 ::__normal_itera\n- 0x003ffc48 746f723c 636f6e73 74206368 61722a2c tor >; Allocator =\n- 0x003ffc88 20737464 3a3a616c 6c6f6361 746f723c std::allocator<\n- 0x003ffc98 626f6f73 743a3a73 75625f6d 61746368 boost::sub_match\n- 0x003ffca8 3c5f5f67 6e755f63 78783a3a 5f5f6e6f <__gnu_cxx::__no\n- 0x003ffcb8 726d616c 5f697465 7261746f 723c636f rmal_iterator > > \n- 0x003ffcf8 3e3b2074 72616974 73203d20 626f6f73 >; traits = boos\n- 0x003ffd08 743a3a72 65676578 5f747261 6974733c t::regex_traits<\n- 0x003ffd18 63686172 3e5d0000 2f757372 2f696e63 char>]../usr/inc\n- 0x003ffd28 6c756465 2f626f6f 73742f72 65676578 lude/boost/regex\n- 0x003ffd38 2f76342f 7065726c 5f6d6174 63686572 /v4/perl_matcher\n- 0x003ffd48 5f6e6f6e 5f726563 75727369 76652e68 _non_recursive.h\n- 0x003ffd58 70700000 636f756e 74203c20 7265702d pp..count < rep-\n- 0x003ffd68 3e6d6178 00000000 626f6f6c 20626f6f >max....bool boo\n- 0x003ffd78 73743a3a 72655f64 65746169 6c5f3130 st::re_detail_10\n- 0x003ffd88 37343030 3a3a7065 726c5f6d 61746368 7400::perl_match\n- 0x003ffd98 65723c42 69646949 74657261 746f722c er::unwind_gree\n- 0x003ffdc8 64795f73 696e676c 655f7265 70656174 dy_single_repeat\n- 0x003ffdd8 28626f6f 6c29205b 77697468 20426964 (bool) [with Bid\n- 0x003ffde8 69497465 7261746f 72203d20 5f5f676e iIterator = __gn\n- 0x003ffdf8 755f6378 783a3a5f 5f6e6f72 6d616c5f u_cxx::__normal_\n- 0x003ffe08 69746572 61746f72 3c636f6e 73742063 iterator >; Alloca\n- 0x003ffe48 746f7220 3d207374 643a3a61 6c6c6f63 tor = std::alloc\n- 0x003ffe58 61746f72 3c626f6f 73743a3a 7375625f ator\n- 0x003ffeb8 203e203e 203e3b20 74726169 7473203d > > >; traits =\n- 0x003ffec8 20626f6f 73743a3a 72656765 785f7472 boost::regex_tr\n- 0x003ffed8 61697473 3c636861 723e5d00 7265702d aits].rep-\n- 0x003ffee8 3e6e6578 742e7020 213d2030 00000000 >next.p != 0....\n- 0x003ffef8 7265702d 3e616c74 2e702021 3d203000 rep->alt.p != 0.\n- 0x003fff08 636f756e 74000000 54686520 61737365 count...The asse\n- 0x003fff18 6d626c65 64207072 6f6a6563 74206861 mbled project ha\n- 0x003fff28 73200000 206f626a 65637473 2e0a0000 s .. objects....\n- 0x003fff38 2e676170 34646100 53617669 6e672063 .gap4da.Saving c\n- 0x003fff48 6f6e7469 67732074 6f206669 6c653a20 ontigs to file: \n- 0x003fff58 00000000 20626173 65732028 636c6970 .... bases (clip\n- 0x003fff68 70656429 2e20546f 6f206c6f 6e672028 ped). Too long (\n- 0x003fff78 3e000000 4d6f7265 206c6f6e 67207265 >...More long re\n- 0x003fff88 61647320 6d617920 65786973 742c2062 ads may exist, b\n- 0x003fff98 75742073 746f7070 696e6720 6f757470 ut stopping outp\n- 0x003fffa8 75742068 6572652e 0a000000 20686173 ut here..... has\n- 0x003fffb8 20717561 6c697479 2076616c 75657320 quality values \n- 0x003fffc8 3e313030 2c207468 69732069 7320696c >100, this is il\n- 0x003fffd8 6c656761 6c2e0a00 4d6f7265 20726561 legal...More rea\n- 0x003fffe8 64732077 69746820 62616420 7175616c ds with bad qual\n- 0x003ffff8 73206d61 79206578 6973742c 20627574 s may exist, but\n- 0x00400008 2073746f 7070696e 67206f75 74707574 stopping output\n- 0x00400018 20686572 652e0a00 4d495241 20666f75 here...MIRA fou\n- 0x00400028 6e642000 20766572 79206c6f 6e672072 nd . very long r\n- 0x00400038 65616473 2028746f 6f206c6f 6e672066 eads (too long f\n- 0x00400048 6f72206e 6f726d61 6c207265 61647329 or normal reads)\n- 0x00400058 2c207365 65206c6f 67206162 6f76652e , see log above.\n- 0x00400068 00000000 766f6964 20417373 656d626c ....void Assembl\n- 0x00400078 793a3a62 61736963 44617461 43686563 y::basicDataChec\n- 0x00400088 6b732829 00000000 20726561 64732077 ks().... reads w\n- 0x00400098 69746820 696c6c65 67616c20 7175616c ith illegal qual\n- 0x004000a8 69746965 732c2073 6565206c 6f672061 ities, see log a\n- 0x004000b8 626f7665 2e000000 20697320 696e2053 bove.... is in S\n- 0x004000c8 5241206e 616d696e 67207363 68656d65 RA naming scheme\n- 0x004000d8 2c207468 61742069 7320756e 65787065 , that is unexpe\n- 0x004000e8 63746564 2e0a0000 4d6f7265 206d6179 cted....More may\n- 0x004000f8 20626520 70726573 656e7420 62757420 be present but \n- 0x00400108 77696c6c 206e6f74 20626520 73686f77 will not be show\n- 0x00400118 6e20616e 796d6f72 652e0a00 496e2072 n anymore...In r\n- 0x00400128 65616467 726f7570 20000000 20286e61 eadgroup ... (na\n- 0x00400138 6d65643a 20270000 27292c20 72656164 med: '..'), read\n- 0x00400148 73206e61 6d657320 77657265 20666f75 s names were fou\n- 0x00400158 6e642077 68696368 20736565 6d20746f nd which seem to\n- 0x00400168 20666f6c 6c6f7720 74686520 53524120 follow the SRA \n- 0x00400178 6e616d69 6e672073 6368656d 65206275 naming scheme bu\n- 0x00400188 74207468 65207265 61646772 6f757020 t the readgroup \n- 0x00400198 646f6573 20686176 65207468 65206e61 does have the na\n- 0x004001a8 6d696e67 20736368 656d6520 27737261 ming scheme 'sra\n- 0x004001b8 272e2049 6e206361 73652079 6f757220 '. In case your \n- 0x004001c8 72656164 73207765 72652064 6f776e6c reads were downl\n- 0x004001d8 6f616465 64206672 6f6d2074 68652053 oaded from the S\n- 0x004001e8 52412c20 69742069 73207374 726f6e67 RA, it is strong\n- 0x004001f8 6c792073 75676765 73746564 20746f20 ly suggested to \n- 0x00400208 74656c6c 204d4952 41207468 61742079 tell MIRA that y\n- 0x00400218 6f757220 72656164 206e616d 65732075 our read names u\n- 0x00400228 73652074 68652063 6f727265 73706f6e se the correspon\n- 0x00400238 64696e67 206e616d 696e6720 73636865 ding naming sche\n- 0x00400248 6d652028 75736520 27736567 6d656e74 me (use 'segment\n- 0x00400258 5f6e616d 696e673d 73726127 20696e20 _naming=sra' in \n- 0x00400268 74686520 6d616e69 66657374 292e0000 the manifest)...\n- 0x00400278 52454144 47524f55 505f554e 45585045 READGROUP_UNEXPE\n- 0x00400288 43544544 5f535241 4e414d45 535f0000 CTED_SRANAMES_..\n- 0x00400298 52656164 206e616d 65732069 6e205352 Read names in SR\n- 0x004002a8 41206e61 6d696e67 20736368 656d6520 A naming scheme \n- 0x004002b8 756e6578 70656374 65642069 6e207265 unexpected in re\n- 0x004002c8 61646772 6f757000 43686563 6b696e67 adgroup.Checking\n- 0x004002d8 20706169 7273206f 66207265 61646772 pairs of readgr\n- 0x004002e8 6f757020 00000000 27293a20 00000000 oup ....'): ....\n- 0x004002f8 5741524e 494e473a 20696e20 74686520 WARNING: in the \n- 0x00400308 61626f76 65207265 61646772 6f75702c above readgroup,\n- 0x00400318 206e6f20 72656164 20697320 70616972 no read is pair\n- 0x00400328 65642061 6c74686f 75676820 74686520 ed although the \n- 0x00400338 6d616e69 66657374 20736179 73207468 manifest says th\n- 0x00400348 65726520 73686f75 6c642062 65207061 ere should be pa\n- 0x00400358 6972732e 20546869 73206973 20666973 irs. This is fis\n- 0x00400368 6879210a 00000000 27292070 61697265 hy!.....') paire\n- 0x00400378 64207265 61647320 77657265 20666f75 d reads were fou\n- 0x00400388 6e642062 7574206e 6f207061 6972696e nd but no pairin\n- 0x00400398 6720696e 666f726d 6174696f 6e206769 g information gi\n- 0x004003a8 76656e20 696e2074 6865206d 616e6966 ven in the manif\n- 0x004003b8 6573742e 204d4952 41207769 6c6c2065 est. MIRA will e\n- 0x004003c8 7374696d 61746520 2774656d 706c6174 stimate 'templat\n- 0x004003d8 655f7369 7a652720 616e6420 27736567 e_size' and 'seg\n- 0x004003e8 6d656e74 5f706c61 63656d65 6e74272e ment_placement'.\n- 0x004003f8 0a596f75 2063616e 20737570 70726573 .You can suppres\n- 0x00400408 73207468 69732077 61726e69 6e672062 s this warning b\n- 0x00400418 79207573 696e6720 74686520 6b657977 y using the keyw\n- 0x00400428 6f726420 27617574 6f706169 72696e67 ord 'autopairing\n- 0x00400438 2720696e 20746865 20726561 6467726f ' in the readgro\n- 0x00400448 75702064 6566696e 6974696f 6e206f66 up definition of\n- 0x00400458 20746865 206d616e 69666573 74206669 the manifest fi\n- 0x00400468 6c652e00 0a4e6f74 65207468 61742074 le...Note that t\n- 0x00400478 68697320 6d617920 62652063 61757365 his may be cause\n- 0x00400488 64206279 20726561 64732066 6f6c6c6f d by reads follo\n- 0x00400498 77696e67 20746865 20535241 206e616d wing the SRA nam\n- 0x004004a8 696e6720 73636865 6d652062 75742079 ing scheme but y\n- 0x004004b8 6f752068 6176696e 67206e6f 74207365 ou having not se\n- 0x004004c8 74207468 65206e61 6d696e67 20736368 t the naming sch\n- 0x004004d8 656d6520 6f662074 68652072 65616467 eme of the readg\n- 0x004004e8 726f7570 20746f20 62652027 73726127 roup to be 'sra'\n- 0x004004f8 2e000000 556e6578 70656374 65642070 ....Unexpected p\n- 0x00400508 61697273 20696e20 72656164 67726f75 airs in readgrou\n- 0x00400518 70000000 52454144 47524f55 505f554e p...READGROUP_UN\n- 0x00400528 45585045 43544544 5f504149 52530000 EXPECTED_PAIRS..\n- 0x00400538 4d495241 20666f75 6e642072 65616467 MIRA found readg\n- 0x00400548 726f7570 73207768 65726520 70616972 roups where pair\n- 0x00400558 73206172 65206578 70656374 65642062 s are expected b\n- 0x00400568 7574206e 6f207265 61642068 61732061 ut no read has a\n- 0x00400578 20706172 746e6572 2e205365 65206c6f partner. See lo\n- 0x00400588 67206162 6f766520 616e6420 7468656e g above and then\n- 0x00400598 20636865 636b2079 6f757220 696e7075 check your inpu\n- 0x004005a8 7420706c 65617365 20286569 74686572 t please (either\n- 0x004005b8 206d616e 69666573 74206669 6c65206f manifest file o\n- 0x004005c8 72206461 74612066 696c6573 206c6f61 r data files loa\n- 0x004005d8 64656420 6f722073 65676d65 6e745f6e ded or segment_n\n- 0x004005e8 616d696e 67207363 68656d65 292e0000 aming scheme)...\n- 0x004005f8 766f6964 20417373 656d626c 793a3a62 void Assembly::b\n- 0x00400608 61736963 52656164 47726f75 70436865 asicReadGroupChe\n- 0x00400618 636b7328 29000000 4d495241 20666f75 cks()...MIRA fou\n- 0x00400628 6e642072 65616467 726f7570 73207768 nd readgroups wh\n- 0x00400638 65726520 72656164 206e616d 65732066 ere read names f\n- 0x00400648 6f6c6c6f 77207468 65205352 41206e61 ollow the SRA na\n- 0x00400658 6d696e67 20736368 656d652c 20627574 ming scheme, but\n- 0x00400668 20746861 74207761 73206e6f 74206578 that was not ex\n- 0x00400678 70656374 65642c20 706c6561 73652073 pected, please s\n- 0x00400688 6565206c 6f672061 626f7665 2e0a5265 ee log above..Re\n- 0x00400698 6d656469 65733a20 75736520 27736567 medies: use 'seg\n- 0x004006a8 6d656e74 5f6e616d 696e673d 73726127 ment_naming=sra'\n- 0x004006b8 20696e20 6d616e69 66657374 2066696c in manifest fil\n- 0x004006c8 6520666f 72207468 69732072 65616467 e for this readg\n- 0x004006d8 726f7570 206f7220 73776974 6368206f roup or switch o\n- 0x004006e8 66662074 68697320 7761726e 696e6720 ff this warning \n- 0x004006f8 76696120 2d4e573a 6373726e 3d6e6f6e via -NW:csrn=non\n- 0x00400708 65206f72 20776172 6e206f6e 6c792077 e or warn only w\n- 0x00400718 69746820 2d4e573a 6373726e 3d776172 ith -NW:csrn=war\n- 0x00400728 6e270000 4c697374 206f6620 72656164 n'..List of read\n- 0x00400738 206e616d 65732077 68696368 20686176 names which hav\n- 0x00400748 65207072 6f626c65 6d732077 69746820 e problems with \n- 0x00400758 6e616d65 206c656e 6774683a 0a000000 name length:....\n- 0x00400768 4e616d65 20746f6f 206c6f6e 673a2000 Name too long: .\n- 0x00400778 20726561 64732068 61642061 206c6f6e reads had a lon\n- 0x00400788 67206e61 6d65206c 656e6774 682c2066 g name length, f\n- 0x00400798 6f722062 72657669 74792773 2073616b or brevity's sak\n- 0x004007a8 65206e6f 7420616c 6c207765 7265206c e not all were l\n- 0x004007b8 69737465 642e0a00 20726561 64732077 isted... reads w\n- 0x004007c8 65726520 64657465 63746564 20776974 ere detected wit\n- 0x004007d8 68206e61 6d657320 6c6f6e67 65722074 h names longer t\n- 0x004007e8 68616e20 00000000 20636861 72616374 han .... charact\n- 0x004007f8 65727320 28736565 206f7574 70757420 ers (see output \n- 0x00400808 6c6f6720 666f7220 6d6f7265 20646574 log for more det\n- 0x00400818 61696c73 292e0a0a 5768696c 65204d49 ails)...While MI\n- 0x00400828 52412061 6e64206d 616e7920 6f746865 RA and many othe\n- 0x00400838 72207072 6f677261 6d732068 61766520 r programs have \n- 0x00400848 6e6f2070 726f626c 656d2077 69746820 no problem with \n- 0x00400858 74686174 2c20736f 6d65206f 6c646572 that, some older\n- 0x00400868 2070726f 6772616d 73206861 76652072 programs have r\n- 0x00400878 65737472 69637469 6f6e7320 636f6e63 estrictions conc\n- 0x00400888 65726e69 6e672074 6865206c 656e6774 erning the lengt\n- 0x00400898 68206f66 20746865 20726561 64206e61 h of the read na\n- 0x004008a8 6d652e0a 0a457861 6d706c65 20676976 me...Example giv\n- 0x004008b8 656e3a20 74686520 70697065 6c696e65 en: the pipeline\n- 0x004008c8 0a202020 20204341 46202d3e 20636166 . CAF -> caf\n- 0x004008d8 32676170 202d3e20 67617032 6361660a 2gap -> gap2caf.\n- 0x004008e8 77696c6c 2073746f 7020776f 726b696e will stop workin\n- 0x004008f8 67206174 20746865 20676170 32636166 g at the gap2caf\n- 0x00400908 20737461 67652069 66207468 65726520 stage if there \n- 0x00400918 61726520 72656164 206e616d 65732068 are read names h\n- 0x00400928 6176696e 67203e20 34302063 68617261 aving > 40 chara\n- 0x00400938 63746572 73207768 65726520 74686520 cters where the \n- 0x00400948 6e616d65 73206469 66666572 206f6e6c names differ onl\n- 0x00400958 79206174 203e3430 20636861 72616374 y at >40 charact\n- 0x00400968 6572732e 0a0a5468 69732069 73206120 ers...This is a \n- 0x00400978 7761726e 696e6720 6f6e6c79 2c206275 warning only, bu\n- 0x00400988 74206173 20612063 6f75706c 65206f66 t as a couple of\n- 0x00400998 2070656f 706c6520 77657265 20626974 people were bit\n- 0x004009a8 74656e20 62792074 6869732c 20746865 ten by this, the\n- 0x004009b8 20646566 61756c74 20626568 6176696f default behavio\n- 0x004009c8 7572206f 66204d49 52412069 7320746f ur of MIRA is to\n- 0x004009d8 2073746f 70207768 656e2069 74207365 stop when it se\n- 0x004009e8 65732074 68617420 706f7465 6e746961 es that potentia\n- 0x004009f8 6c207072 6f626c65 6d2e0a0a 596f7520 l problem...You \n- 0x00400a08 6d696768 74207761 6e742074 6f207265 might want to re\n- 0x00400a18 6e616d65 20796f75 72207265 61647320 name your reads \n- 0x00400a28 746f2068 61766520 3c3d2000 20636861 to have <= . cha\n- 0x00400a38 72616374 6572732e 20496e73 74656164 racters. Instead\n- 0x00400a48 206f6620 72656e61 6d696e67 20726561 of renaming rea\n- 0x00400a58 64732069 6e207468 6520696e 70757420 ds in the input \n- 0x00400a68 66696c65 732c206d 61796265 20746865 files, maybe the\n- 0x00400a78 20277265 6e616d65 5f707265 66697827 'rename_prefix'\n- 0x00400a88 2066756e 6374696f 6e616c69 7479206f functionality o\n- 0x00400a98 66206d61 6e696665 73742066 696c6573 f manifest files\n- 0x00400aa8 20697320 75736566 756c2066 6f722079 is useful for y\n- 0x00400ab8 6f752074 68657265 2e0a0a4f 6e207468 ou there...On th\n- 0x00400ac8 65206f74 68657220 68616e64 2c20796f e other hand, yo\n- 0x00400ad8 7520616c 736f2063 616e2069 676e6f72 u also can ignor\n- 0x00400ae8 65207468 69732070 6f74656e 7469616c e this potential\n- 0x00400af8 2070726f 626c656d 20616e64 20666f72 problem and for\n- 0x00400b08 6365204d 49524120 746f2063 6f6e7469 ce MIRA to conti\n- 0x00400b18 6e756520 62792075 73696e67 20746865 nue by using the\n- 0x00400b28 20706172 616d6574 65723a20 272d4e57 parameter: '-NW\n- 0x00400b38 3a636d72 6e6c3d77 61726e27 20206f72 :cmrnl=warn' or\n- 0x00400b48 2020272d 4e573a63 6d726e6c 3d6e6f27 '-NW:cmrnl=no'\n- 0x00400b58 0a000000 766f6964 20417373 656d626c ....void Assembl\n- 0x00400b68 793a3a63 6865636b 466f7252 6561644e y::checkForReadN\n- 0x00400b78 616d654c 656e6774 68287569 6e743332 ameLength(uint32\n- 0x00400b88 2073746f 706c656e 67746829 00000000 stoplength)....\n- 0x00400b98 5741524e 494e4721 0a000000 4c6f6e67 WARNING!....Long\n- 0x00400ba8 20726561 64206e61 6d657300 52454144 read names.READ\n- 0x00400bb8 5f4e414d 455f544f 4f5f4c4f 4e470000 _NAME_TOO_LONG..\n- 0x00400bc8 4c6f6767 696e6720 74686973 20636f6e Logging this con\n- 0x00400bd8 74696720 746f2066 696c653a 20000000 tig to file: ...\n- 0x00400be8 4c6f6767 696e6720 74686973 20636f6e Logging this con\n- 0x00400bf8 74696720 746f2066 696c6573 3a200000 tig to files: ..\n- 0x00400c08 2020616e 64202000 4c6f6767 696e6720 and .Logging \n- 0x00400c18 74686973 20636f6e 74696720 746f2064 this contig to d\n- 0x00400c28 69726563 746f7279 3a200000 43616e6e irectory: ..Cann\n- 0x00400c38 6f74206d 616b6520 73757265 20746865 ot make sure the\n- 0x00400c48 20646972 6563746f 72792065 78697374 directory exist\n- 0x00400c58 3f204162 6f727469 6e672e00 766f6964 ? Aborting..void\n- 0x00400c68 20417373 656d626c 793a3a73 61766545 Assembly::saveE\n- 0x00400c78 7874546d 70436f6e 74696728 7374643a xtTmpContig(std:\n- 0x00400c88 3a737472 696e6720 70726570 6f737429 :string prepost)\n- 0x00400c98 00000000 2f666f66 6e000000 4d495241 ..../fofn...MIRA\n- 0x00400ca8 20666f75 6e642064 75706c69 63617465 found duplicate\n- 0x00400cb8 20726561 64206e61 6d657320 696e2079 read names in y\n- 0x00400cc8 6f757220 64617461 20287365 65206c6f our data (see lo\n- 0x00400cd8 67206162 6f766520 666f7220 6d6f7265 g above for more\n- 0x00400ce8 20696e66 6f292e0a 0a546869 73207368 info)...This sh\n- 0x00400cf8 6f756c64 206e6576 65722c20 6e657665 ould never, neve\n- 0x00400d08 72206265 210a0a59 6f75206d 61792068 r be!..You may h\n- 0x00400d18 61766520 6c6f6164 65642061 2066696c ave loaded a fil\n- 0x00400d28 65206d6f 72652074 68616e20 6f6e6365 e more than once\n- 0x00400d38 20696e20 74686520 6d616e69 66657374 in the manifest\n- 0x00400d48 206f720a 72656164 73206d61 79206265 or.reads may be\n- 0x00400d58 20707265 73656e74 206d756c 7469706c present multipl\n- 0x00400d68 65207469 6d657320 6163726f 73732079 e times across y\n- 0x00400d78 6f757220 696e7075 74206669 6c652873 our input file(s\n- 0x00400d88 292e0a45 69746865 72207761 793a2066 )..Either way: f\n- 0x00400d98 69782074 68617421 0a000000 766f6964 ix that!....void\n- 0x00400da8 20417373 656d626c 793a3a70 6f73744c Assembly::postL\n- 0x00400db8 6f616428 29000000 43686563 6b696e67 oad()...Checking\n- 0x00400dc8 20726561 64732066 6f722074 72616365 reads for trace\n- 0x00400dd8 20646174 6120286c 6f616469 6e672071 data (loading q\n- 0x00400de8 75616c69 74696573 20696620 6e656564 ualities if need\n- 0x00400df8 6564293a 0a000000 556e6b6e 6f776e20 ed):....Unknown \n- 0x00400e08 72656164 20286c6f 61646564 20617320 read (loaded as \n- 0x00400e18 6e756d62 65723a20 00000000 4e6f2053 number: ....No S\n- 0x00400e28 43462064 61746120 70726573 656e7420 CF data present \n- 0x00400e38 696e2061 6e792072 6561642c 20456449 in any read, EdI\n- 0x00400e48 74206175 746f6d61 74696320 636f6e74 t automatic cont\n- 0x00400e58 69672065 64697469 6e672066 6f722053 ig editing for S\n- 0x00400e68 616e6765 72206461 74612069 73206e6f anger data is no\n- 0x00400e78 77207377 69746368 6564206f 66662e0a w switched off..\n- 0x00400e88 00000000 20726561 64732077 69746820 .... reads with \n- 0x00400e98 76616c69 64206461 74612066 6f722061 valid data for a\n- 0x00400ea8 7373656d 626c792e 0a000000 4e6f2076 ssembly.....No v\n- 0x00400eb8 616c6964 20726561 6420696e 20617373 alid read in ass\n- 0x00400ec8 656d626c 793f0000 4e6f2075 73656675 embly?..No usefu\n- 0x00400ed8 6c207465 6d706c61 74652069 6e666f72 l template infor\n- 0x00400ee8 6d617469 6f6e2066 6f756e64 2e0a0000 mation found....\n- 0x00400ef8 544f444f 3a204c69 6b652052 65616470 TODO: Like Readp\n- 0x00400f08 6f6f6c3a 20737472 61696e20 78206861 ool: strain x ha\n- 0x00400f18 73207920 72656164 730a0000 4e6f2071 s y reads...No q\n- 0x00400f28 75616c69 74792064 61746120 666f756e uality data foun\n- 0x00400f38 643a2028 00000000 536f6d65 20726561 d: (....Some rea\n- 0x00400f48 64732068 6164206e 6f207175 616c6974 ds had no qualit\n- 0x00400f58 79207661 6c756573 20676976 656e2028 y values given (\n- 0x00400f68 73656520 6c6f6720 61626f76 65292c0a see log above),.\n- 0x00400f78 706c6561 73652063 6865636b 20796f75 please check you\n- 0x00400f88 7220696e 70757420 64617461 2e0a4966 r input data..If\n- 0x00400f98 20737572 65207468 61742074 68697320 sure that this \n- 0x00400fa8 6973206f 6b20666f 7220796f 75722064 is ok for your d\n- 0x00400fb8 6174612c 20737769 74636820 6f666620 ata, switch off \n- 0x00400fc8 74686973 20636865 636b2077 69746820 this check with \n- 0x00400fd8 2d41533a 65706f71 3d6e6f0a 666f7220 -AS:epoq=no.for \n- 0x00400fe8 616e7920 73657175 656e6369 6e672074 any sequencing t\n- 0x00400ff8 79706520 796f7520 77697368 20285361 ype you wish (Sa\n- 0x00401008 6e676572 2c203435 342c2049 6f6e546f nger, 454, IonTo\n- 0x00401018 7272656e 742c2050 61636269 6f4c512c rrent, PacbioLQ,\n- 0x00401028 20506163 62696f48 512c2054 6578742c PacbioHQ, Text,\n- 0x00401038 20536f6c 6578612c 202e2e2e 292e0a41 Solexa, ...)..A\n- 0x00401048 6c736f20 636f6e73 69646572 20746865 lso consider the\n- 0x00401058 20272d2d 6e6f7175 616c6974 69657327 '--noqualities'\n- 0x00401068 20706172 616d6574 65722073 65747469 parameter setti\n- 0x00401078 6e672e0a 416c7465 726e6174 6976656c ng..Alternativel\n- 0x00401088 792c2079 6f752063 616e2066 6f726365 y, you can force\n- 0x00401098 20746f20 73776974 6368206f 66662074 to switch off t\n- 0x004010a8 68697320 63686563 6b20666f 72207370 his check for sp\n- 0x004010b8 65636966 69632072 65616467 726f7570 ecific readgroup\n- 0x004010c8 73206279 20757369 6e672074 68652027 s by using the '\n- 0x004010d8 64656661 756c745f 7175616c 27207365 default_qual' se\n- 0x004010e8 7474696e 6720696e 20746865 206d616e tting in the man\n- 0x004010f8 69666573 742e0000 53617669 6e672064 ifest...Saving d\n- 0x00401108 65627269 73206c69 73742074 6f206669 ebris list to fi\n- 0x00401118 6c653a20 00000000 0953484f 52544f4e le: .....SHORTON\n- 0x00401128 4c4f4144 0a000000 09554e53 50454349 LOAD.....UNSPECI\n- 0x00401138 46494544 0a000000 094e4f5f 4f564552 FIED.....NO_OVER\n- 0x00401148 4c41500a 00000000 0946494c 5445525f LAP......FILTER_\n- 0x00401158 4d454741 4855420a 00000000 094d4153 MEGAHUB......MAS\n- 0x00401168 4b45445f 4e415354 595f5245 50454154 KED_NASTY_REPEAT\n- 0x00401178 0a000000 094d4153 4b45445f 48414637 .....MASKED_HAF7\n- 0x00401188 5f524550 4541540a 00000000 094d4153 _REPEAT......MAS\n- 0x00401198 4b45445f 48414636 5f524550 4541540a KED_HAF6_REPEAT.\n- 0x004011a8 00000000 094e4f54 5f4d4150 5045440a .....NOT_MAPPED.\n- 0x004011b8 00000000 0941424f 52544544 5f434f4e .....ABORTED_CON\n- 0x004011c8 5449475f 43524541 54494f4e 0a000000 TIG_CREATION....\n- 0x004011d8 0954494e 595f434f 4e544947 0a000000 .TINY_CONTIG....\n- 0x004011e8 0954494e 595f434c 55535445 520a0000 .TINY_CLUSTER...\n- 0x004011f8 0954494e 595f434c 55535445 525f4f52 .TINY_CLUSTER_OR\n- 0x00401208 5048414e 0a000000 09554e53 41564544 PHAN.....UNSAVED\n- 0x00401218 5f53494e 474c4554 0a000000 09444947 _SINGLET.....DIG\n- 0x00401228 4954414c 5f4e4f52 4d414c49 53415449 ITAL_NORMALISATI\n- 0x00401238 4f4e0a00 09434c49 505f4241 445f534f ON...CLIP_BAD_SO\n- 0x00401248 4c455841 5f454e44 0a000000 09434c49 LEXA_END.....CLI\n- 0x00401258 505f4b4e 4f574e41 44415054 4f525249 P_KNOWNADAPTORRI\n- 0x00401268 4748540a 00000000 09434c49 505f5155 GHT......CLIP_QU\n- 0x00401278 414c4d49 4e544852 4553484f 4c440a00 ALMINTHRESHOLD..\n- 0x00401288 09434c49 505f4c4f 57455243 41534546 .CLIP_LOWERCASEF\n- 0x00401298 524f4e54 0a000000 09434c49 505f4c4f RONT.....CLIP_LO\n- 0x004012a8 57455243 41534542 41434b0a 00000000 WERCASEBACK.....\n- 0x004012b8 09434c49 505f5155 414c434c 4950530a .CLIP_QUALCLIPS.\n- 0x004012c8 00000000 09434c49 505f4d41 534b4544 .....CLIP_MASKED\n- 0x004012d8 42415345 530a0000 09434c49 505f4241 BASES....CLIP_BA\n- 0x004012e8 44534551 55454e43 45534552 4143480a DSEQUENCESERACH.\n- 0x004012f8 00000000 09434c49 505f504f 4c594241 .....CLIP_POLYBA\n- 0x00401308 53454154 454e440a 00000000 09434c49 SEATEND......CLI\n- 0x00401318 505f504f 4c594154 0a000000 09434c49 P_POLYAT.....CLI\n- 0x00401328 505f4d49 4e4c4546 54434c49 500a0000 P_MINLEFTCLIP...\n- 0x00401338 09434c49 505f4d49 4e524947 4854434c .CLIP_MINRIGHTCL\n- 0x00401348 49500a00 09434c49 505f5048 49583137 IP...CLIP_PHIX17\n- 0x00401358 340a0000 09434c49 505f5252 4e410a00 4....CLIP_RRNA..\n- 0x00401368 09434c49 505f5252 4e415f50 4149520a .CLIP_RRNA_PAIR.\n- 0x00401378 00000000 09434c49 505f5052 4f504f53 .....CLIP_PROPOS\n- 0x00401388 4544454e 44434c49 500a0000 09434c49 EDENDCLIP....CLI\n- 0x00401398 505f4348 494d4552 410a0000 09434c49 P_CHIMERA....CLI\n- 0x004013a8 505f5445 524d494e 414c4c59 494e434f P_TERMINALLYINCO\n- 0x004013b8 52524543 5449424c 454f5243 48494d45 RRECTIBLEORCHIME\n- 0x004013c8 52410a00 09434c49 505f494e 434f5252 RA...CLIP_INCORR\n- 0x004013d8 45435449 424c4545 4e444f52 4348494d ECTIBLEENDORCHIM\n- 0x004013e8 4552410a 00000000 094e4f5f 434f4445 ERA......NO_CODE\n- 0x004013f8 5f594554 3f5f0000 4e6f2072 65616420 _YET?_..No read \n- 0x00401408 77697468 20736571 75656e63 65206c65 with sequence le\n- 0x00401418 6e677468 203e3020 70726573 656e743f ngth >0 present?\n- 0x00401428 20446964 20796f75 2070726f 76696465 Did you provide\n- 0x00401438 20646174 6120746f 206c6f61 643f0000 data to load?..\n- 0x00401448 766f6964 20417373 656d626c 793a3a61 void Assembly::a\n- 0x00401458 64645261 696c7354 6f426163 6b626f6e ddRailsToBackbon\n- 0x00401468 65732829 00000000 2d414c3a 73686d65 es()....-AL:shme\n- 0x00401478 20697320 3c20302c 20617574 6f6d6174 is < 0, automat\n- 0x00401488 6963616c 6c792064 65746572 6d696e69 ically determini\n- 0x00401498 6e67206f 7074696d 616c2076 616c7565 ng optimal value\n- 0x004014a8 2e0a0000 73657420 2d414c3a 73686d65 ....set -AL:shme\n- 0x004014b8 20000000 2d53423a 62726c20 69732030 ...-SB:brl is 0\n- 0x004014c8 2c206175 746f6d61 74696361 6c6c7920 , automatically \n- 0x004014d8 64657465 726d696e 696e6720 6f707469 determining opti\n- 0x004014e8 6d616c20 76616c75 652e0a00 4f707469 mal value...Opti\n- 0x004014f8 6d616c20 7261696c 20776f75 6c642062 mal rail would b\n- 0x00401508 65206c6f 6e676572 20746861 6e203332 e longer than 32\n- 0x00401518 6b2c2061 646a7573 74696e67 20646f77 k, adjusting dow\n- 0x00401528 6e20746f 2033326b 2e0a0000 62726c3a n to 32k....brl:\n- 0x00401538 20000000 2d53423a 62726f20 69732030 ...-SB:bro is 0\n- 0x00401548 2c206175 746f6d61 74696361 6c6c7920 , automatically \n- 0x00401558 64657465 726d696e 696e6720 6f707469 determining opti\n- 0x00401568 6d616c20 76616c75 652e0a00 62726f3a mal value...bro:\n- 0x00401578 20000000 2d53423a 62726f20 6973203e ...-SB:bro is >\n- 0x00401588 3d202d53 423a6272 6c202e2e 2e206164 = -SB:brl ... ad\n- 0x00401598 6a757374 696e6720 2d53423a 62726f20 justing -SB:bro \n- 0x004015a8 746f2028 2d53423a 62726c29 2d310a00 to (-SB:brl)-1..\n- 0x004015b8 6e6f2062 61636b62 6f6e6520 72656164 no backbone read\n- 0x004015c8 20666f75 6e642069 6e206261 636b626f found in backbo\n- 0x004015d8 6e653f3f 3f000000 5f740000 434c4950 ne???..._t..CLIP\n- 0x004015e8 204d5347 3a207252 4e412066 6f756e64 MSG: rRNA found\n- 0x004015f8 3a200000 3a20756e 61626c65 20746f20 : ..: unable to \n- 0x00401608 6c6f6164 206f7220 6f746865 72207265 load or other re\n- 0x00401618 61736f6e 20666f72 20696e76 616c6964 ason for invalid\n- 0x00401628 20646174 612e0a00 20746f6f 20736d61 data... too sma\n- 0x00401638 6c6c2061 6e64206e 6f207061 69726564 ll and no paired\n- 0x00401648 20656e64 0a000000 20746f6f 20736d61 end.... too sma\n- 0x00401658 6c6c2065 76656e20 77697468 20706169 ll even with pai\n- 0x00401668 72656420 656e640a 00000000 20736176 red end..... sav\n- 0x00401678 65642062 79207061 69726564 2d656e64 ed by paired-end\n- 0x00401688 0a000000 2f656c6f 672e7573 65646964 ..../elog.usedid\n- 0x00401698 732e6c73 74000000 2f6d6972 616c6f67 s.lst.../miralog\n- 0x004016a8 2e6e6f71 75616c69 74696573 00000000 .noqualities....\n- 0x004016b8 20686173 20726769 64206f66 20303f3f has rgid of 0??\n- 0x004016c8 3f204f75 63682e00 766f6964 20417373 ? Ouch..void Ass\n- 0x004016d8 656d626c 793a3a64 756d7053 6f6d6553 embly::dumpSomeS\n- 0x004016e8 74617469 73746963 73282900 20686173 tatistics(). has\n- 0x004016f8 20726769 64206f66 20000000 20616e64 rgid of ... and\n- 0x00401708 206e756d 206f6620 72656164 67726f75 num of readgrou\n- 0x00401718 70732069 73200000 3f3f3f20 4f756368 ps is ..??? Ouch\n- 0x00401728 2e000000 54797065 20414249 20534f4c ....Type ABI SOL\n- 0x00401738 6944206e 65656473 206d6f72 65207375 iD needs more su\n- 0x00401748 70706f72 74203230 612e0000 53657175 pport 20a...Sequ\n- 0x00401758 656e6369 6e672074 79706520 00000000 encing type ....\n- 0x00401768 20756e6b 6e6f776e 3f0a0000 466f756e unknown?...Foun\n- 0x00401778 6420756e 6b6e6f77 6e207365 7175656e d unknown sequen\n- 0x00401788 63696e67 20747970 6520696e 20726561 cing type in rea\n- 0x00401798 642e0000 0a3d3d3d 3d3d3d3d 3d3d3d3d d....===========\n+ 0x003fdbc8 3d3d3d3d 3d3d3d3d 3d3d3d3d 0a576974 ============.Wit\n+ 0x003fdbd8 6809436f 6e746967 2073697a 6509093e h.Contig size..>\n+ 0x003fdbe8 3d200000 0a09414e 44202854 6f74616c = ....AND (Total\n+ 0x003fdbf8 20617667 2e20436f 76093e3d 20000000 avg. Cov.>= ...\n+ 0x003fdc08 0a092020 2020204f 5220436f 76280000 .. OR Cov(..\n+ 0x003fdc18 29093e3d 20000000 0a092020 2020290a ).>= ..... ).\n+ 0x003fdc28 0a000000 0a416c6c 20636f6e 74696773 .....All contigs\n+ 0x003fdc38 3a0a0000 20204c65 6e677468 20617373 :... Length ass\n+ 0x003fdc48 6573736d 656e743a 0a20202d 2d2d2d2d essment:. -----\n+ 0x003fdc58 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d0a0000 -------------...\n+ 0x003fdc68 20204e75 6d626572 206f6620 636f6e74 Number of cont\n+ 0x003fdc78 6967733a 09000000 0a202054 6f74616c igs:..... Total\n+ 0x003fdc88 20636f6e 73656e73 75733a09 00000000 consensus:.....\n+ 0x003fdc98 0a20204c 61726765 73742063 6f6e7469 . Largest conti\n+ 0x003fdca8 673a0900 0a20204e 35302063 6f6e7469 g:... N50 conti\n+ 0x003fdcb8 67207369 7a653a09 00000000 0a20204e g size:...... N\n+ 0x003fdcc8 39302063 6f6e7469 67207369 7a653a09 90 contig size:.\n+ 0x003fdcd8 00000000 0a20204e 39352063 6f6e7469 ..... N95 conti\n+ 0x003fdce8 67207369 7a653a09 00000000 0a0a2020 g size:....... \n+ 0x003fdcf8 436f7665 72616765 20617373 6573736d Coverage assessm\n+ 0x003fdd08 656e743a 0a20202d 2d2d2d2d 2d2d2d2d ent:. ---------\n+ 0x003fdd18 2d2d2d2d 2d2d2d2d 2d2d2d0a 00000000 -----------.....\n+ 0x003fdd28 20204d61 7820636f 76657261 67652028 Max coverage (\n+ 0x003fdd38 746f7461 6c293a09 00000000 0a20204d total):...... M\n+ 0x003fdd48 61782063 6f766572 61676520 70657220 ax coverage per \n+ 0x003fdd58 73657175 656e6369 6e672074 6563686e sequencing techn\n+ 0x003fdd68 6f6c6f67 79000000 0a0a2020 5175616c ology..... Qual\n+ 0x003fdd78 69747920 61737365 73736d65 6e743a0a ity assessment:.\n+ 0x003fdd88 20202d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d --------------\n+ 0x003fdd98 2d2d2d2d 2d000000 0a202041 76657261 -----.... Avera\n+ 0x003fdda8 67652063 6f6e7365 6e737573 20717561 ge consensus qua\n+ 0x003fddb8 6c697479 3a090909 00000000 0a202043 lity:........ C\n+ 0x003fddc8 6f6e7365 6e737573 20626173 65732077 onsensus bases w\n+ 0x003fddd8 69746820 49555041 433a0909 09000000 ith IUPAC:......\n+ 0x003fdde8 0a202053 74726f6e 6720756e 7265736f . Strong unreso\n+ 0x003fddf8 6c766564 20726570 65617420 706f7369 lved repeat posi\n+ 0x003fde08 74696f6e 73202853 524d6329 3a090000 tions (SRMc):...\n+ 0x003fde18 0a202057 65616b20 756e7265 736f6c76 . Weak unresolv\n+ 0x003fde28 65642072 65706561 7420706f 73697469 ed repeat positi\n+ 0x003fde38 6f6e7320 2857524d 63293a09 00000000 ons (WRMc):.....\n+ 0x003fde48 0a202053 65717565 6e63696e 67205479 . Sequencing Ty\n+ 0x003fde58 7065204d 69736d61 74636820 556e736f pe Mismatch Unso\n+ 0x003fde68 6c766564 20285354 4d55293a 09000000 lved (STMU):....\n+ 0x003fde78 0a202043 6f6e7469 67732068 6176696e . Contigs havin\n+ 0x003fde88 67206f6e 6c792072 65616473 20776f20 g only reads wo \n+ 0x003fde98 7175616c 3a090900 0a202043 6f6e7469 qual:.... Conti\n+ 0x003fdea8 67732077 69746820 72656164 7320776f gs with reads wo\n+ 0x003fdeb8 20717561 6c207661 6c756573 3a090900 qual values:...\n+ 0x003fdec8 476f676f 3a206d61 7070696e 67207768 Gogo: mapping wh\n+ 0x003fded8 61746576 6572206c 6566740a 00000000 atever left.....\n+ 0x003fdee8 476f676f 3a20636f 656c2000 62666363 Gogo: coel .bfcc\n+ 0x003fdef8 70310000 476f676f 3a203130 3025206d p1..Gogo: 100% m\n+ 0x003fdf08 61707069 6e670a00 476f676f 3a206164 apping..Gogo: ad\n+ 0x003fdf18 64206f74 68657273 20636c65 616e2065 d others clean e\n+ 0x003fdf28 6e64730a 00000000 476f676f 3a206d61 nds.....Gogo: ma\n+ 0x003fdf38 7070696e 67203120 6d69736d 61746368 pping 1 mismatch\n+ 0x003fdf48 0a000000 476f676f 3a206d61 7070696e ....Gogo: mappin\n+ 0x003fdf58 67203120 6761700a 00000000 476f676f g 1 gap.....Gogo\n+ 0x003fdf68 3a206d61 7070696e 67203220 6d69736d : mapping 2 mism\n+ 0x003fdf78 61746368 65730a00 476f676f 3a206d61 atches..Gogo: ma\n+ 0x003fdf88 7070696e 67203120 6761702c 2031206d pping 1 gap, 1 m\n+ 0x003fdf98 69736d61 7463680a 00000000 476f676f ismatch.....Gogo\n+ 0x003fdfa8 3a206d61 7070696e 67203220 6572726f : mapping 2 erro\n+ 0x003fdfb8 72732028 3d3d7265 6d61696e 696e6720 rs (==remaining \n+ 0x003fdfc8 32206761 70732028 616e6420 6d617962 2 gaps (and mayb\n+ 0x003fdfd8 65206e65 77206d69 736d6174 63686573 e new mismatches\n+ 0x003fdfe8 29290a00 476f676f 3a206d61 7070696e ))..Gogo: mappin\n+ 0x003fdff8 6720616c 6c200000 20657272 6f72730a g all .. errors.\n+ 0x003fe008 00000000 70746372 2041535f 75736564 ....ptcr AS_used\n+ 0x003fe018 5f696473 5b000000 5d3d0000 466f756e _ids[...]=..Foun\n+ 0x003fe028 64206964 783a2000 54696d69 6e672042 d idx: .Timing B\n+ 0x003fe038 46432075 6e757365 643a2000 43556e75 FC unused: .CUnu\n+ 0x003fe048 7365643a 20000000 54556e75 7365643a sed: ...TUnused:\n+ 0x003fe058 20000000 41535f75 7365645f 6964732e ...AS_used_ids.\n+ 0x003fe068 73697a65 28293a20 00000000 20213d20 size(): .... != \n+ 0x003fe078 65787065 63746564 20000000 766f6964 expected ...void\n+ 0x003fe088 20417373 656d626c 793a3a62 66635f73 Assembly::bfc_s\n+ 0x003fe098 616e6974 79436865 636b4153 55534544 anityCheckASUSED\n+ 0x003fe0a8 49445328 75696e74 3332206e 756d6578 IDS(uint32 numex\n+ 0x003fe0b8 70656374 65642900 0a0a4761 61616161 pected)...Gaaaaa\n+ 0x003fe0c8 61686868 68686868 68210a00 72756e49 ahhhhhhhh!..runI\n+ 0x003fe0d8 2d3e7269 64312000 20213d20 6f727069 ->rid1 . != orpi\n+ 0x003fe0e8 64200000 636f6e66 65646765 732e7369 d ..confedges.si\n+ 0x003fe0f8 7a652829 20000000 72756e49 20646973 ze() ...runI dis\n+ 0x003fe108 743a2000 72756e49 202d3120 2d3e7269 t: .runI -1 ->ri\n+ 0x003fe118 64313a20 00000000 72756e49 2d3e7269 d1: ....runI->ri\n+ 0x003fe128 6431213d 6f727069 64202e2e 2e207265 d1!=orpid ... re\n+ 0x003fe138 616c6c79 3f3f3f00 766f6964 20417373 ally???.void Ass\n+ 0x003fe148 656d626c 793a3a62 66635f73 61766550 embly::bfc_saveP\n+ 0x003fe158 65727369 7374656e 74536d61 6c6c4f76 ersistentSmallOv\n+ 0x003fe168 65726c61 70732843 6f6e7469 67202620 erlaps(Contig & \n+ 0x003fe178 74686973 636f6e2c 20636f6e 73742069 thiscon, const i\n+ 0x003fe188 6e743332 20706173 736e722c 20737464 nt32 passnr, std\n+ 0x003fe198 3a3a6f73 74726561 6d202620 666f7574 ::ostream & fout\n+ 0x003fe1a8 29000000 5f707265 7472696d 73726d00 )..._pretrimsrm.\n+ 0x003fe1b8 73726d20 21204153 5f757365 645f6964 srm ! AS_used_id\n+ 0x003fe1c8 735b2e2e 2e5d203f 3f3f0000 626f6f6c s[...] ???..bool\n+ 0x003fe1d8 20417373 656d626c 793a3a62 66635f74 Assembly::bfc_t\n+ 0x003fe1e8 72696d44 656e6f76 6f49664e 65636573 rimDenovoIfNeces\n+ 0x003fe1f8 73617279 28436f6e 74696720 26206275 sary(Contig & bu\n+ 0x003fe208 696c6463 6f6e2c20 626f6f6c 20666f75 ildcon, bool fou\n+ 0x003fe218 6e645352 4d732c20 75696e74 33322026 ndSRMs, uint32 &\n+ 0x003fe228 20747261 636b696e 67756e75 73656429 trackingunused)\n+ 0x003fe238 00000000 4f6c6420 74726163 6b696e67 ....Old tracking\n+ 0x003fe248 756e7573 65643a20 00000000 496e7465 unused: ....Inte\n+ 0x003fe258 726d6564 69617465 20747261 636b696e rmediate trackin\n+ 0x003fe268 67756e75 7365643a 20000000 4e657720 gunused: ...New \n+ 0x003fe278 74726163 6b696e67 756e7573 65643a20 trackingunused: \n+ 0x003fe288 00000000 5f706f73 74747269 6d73726d ...._posttrimsrm\n+ 0x003fe298 00000000 466f756e 64206d69 73617373 ....Found misass\n+ 0x003fe2a8 656d626c 79206279 20706169 7220636f embly by pair co\n+ 0x003fe2b8 6e736973 74656e63 792e2042 65737420 nsistency. Best \n+ 0x003fe2c8 72616e67 653a2000 5f707265 7472696d range: ._pretrim\n+ 0x003fe2d8 70616972 00000000 70616972 20636f6e pair....pair con\n+ 0x003fe2e8 73697374 656e6379 20212041 535f7573 sistency ! AS_us\n+ 0x003fe2f8 65645f69 64735b2e 2e2e5d20 3f3f3f00 ed_ids[...] ???.\n+ 0x003fe308 5f706f73 74747269 6d706169 72000000 _posttrimpair...\n+ 0x003fe318 5f707265 72656400 5573696e 673a2000 _prered.Using: .\n+ 0x003fe328 436f7665 72616765 72656d6f 76653a20 Coverageremove: \n+ 0x003fe338 00000000 72657265 20212041 535f7573 ....rere ! AS_us\n+ 0x003fe348 65645f69 64735b72 69645d20 3f3f3f00 ed_ids[rid] ???.\n+ 0x003fe358 5f706f73 74726564 00000000 4d6f7669 _postred....Movi\n+ 0x003fe368 6e672073 6d616c6c 20636c75 73746572 ng small cluster\n+ 0x003fe378 7320746f 20646562 7269733a 0a000000 s to debris:....\n+ 0x003fe388 0a446f6e 652e2000 20726561 6473206d .Done. . reads m\n+ 0x003fe398 6f766564 20746f20 64656272 69732e0a oved to debris..\n+ 0x003fe3a8 00000000 094b6e6f 776e2031 3a200000 .....Known 1: ..\n+ 0x003fe3b8 69746572 20302c20 50462069 6e697420 iter 0, PF init \n+ 0x003fe3c8 6e657720 636f6e74 69670a00 69746572 new contig..iter\n+ 0x003fe3d8 206e2c20 6d617070 696e672c 20504620 n, mapping, PF \n+ 0x003fe3e8 72657379 6e632063 6f6e7469 670a0000 resync contig...\n+ 0x003fe3f8 4b6e6f77 6e20323a 20000000 61737365 Known 2: ...asse\n+ 0x003fe408 6d626c79 6d6f6465 5f6d6170 70696e67 mblymode_mapping\n+ 0x003fe418 3a200000 6d617070 696e6720 2620736f : ..mapping & so\n+ 0x003fe428 6c657861 20626f6f 74737472 61700a00 lexa bootstrap..\n+ 0x003fe438 4c6f6f6b 696e6720 61742077 68617420 Looking at what \n+ 0x003fe448 746f2074 68726f77 20617761 79202e2e to throw away ..\n+ 0x003fe458 2e200000 73747269 7070696e 67202e2e . ..stripping ..\n+ 0x003fe468 2e200000 646f6e65 2c206368 6f6d7069 . ..done, chompi\n+ 0x003fe478 6e67202e 2e2e2000 646f6e65 2c207379 ng ... .done, sy\n+ 0x003fe488 6e636869 6e67202e 2e2e2000 54552062 nching ... .TU b\n+ 0x003fe498 65666f72 65200000 52494473 206b6e6f efore ..RIDs kno\n+ 0x003fe4a8 776e2000 54552061 66746572 20000000 wn .TU after ...\n+ 0x003fe4b8 4b6e6f77 6e20333a 20000000 62666363 Known 3: ...bfcc\n+ 0x003fe4c8 70330000 6e6f2062 66636370 33000000 p3..no bfccp3...\n+ 0x003fe4d8 54696d69 6e672042 46432070 61662063 Timing BFC paf c\n+ 0x003fe4e8 6f6e7374 72756374 3a200000 094b6e6f onstruct: ...Kno\n+ 0x003fe4f8 776e2033 3a200000 54726967 67657269 wn 3: ..Triggeri\n+ 0x003fe508 6e672061 64646974 696f6e61 6c20636c ng additional cl\n+ 0x003fe518 75737465 72206368 65636b3a 00000000 uster check:....\n+ 0x003fe528 2073686f 756c646d 6f766573 6d616c6c shouldmovesmall\n+ 0x003fe538 636c7573 74657273 746f6465 62726973 clusterstodebris\n+ 0x003fe548 00000000 20737461 72744361 63686552 .... startCacheR\n+ 0x003fe558 616e4472 79000000 20737461 72744361 anDry... startCa\n+ 0x003fe568 63686548 61735369 6e676c65 74730000 cheHasSinglets..\n+ 0x003fe578 4f6f6f6f 6f70732c 20726561 64206973 Ooooops, read is\n+ 0x003fe588 20696e20 636f6e74 69672062 7574206e in contig but n\n+ 0x003fe598 6f742075 7365643f 20000000 766f6964 ot used? ...void\n+ 0x003fe5a8 20417373 656d626c 793a3a62 66635f63 Assembly::bfc_c\n+ 0x003fe5b8 616c6c50 61746866 696e6465 7228636f allPathfinder(co\n+ 0x003fe5c8 6e737420 696e7433 32207061 73736e72 nst int32 passnr\n+ 0x003fe5d8 2c20636f 6e737420 75696e74 33322069 , const uint32 i\n+ 0x003fe5e8 7465722c 2075696e 74333220 74726163 ter, uint32 trac\n+ 0x003fe5f8 6b696e67 756e7573 65642c20 626f6f6c kingunused, bool\n+ 0x003fe608 2073686f 756c646d 6f766573 6d616c6c shouldmovesmall\n+ 0x003fe618 636c7573 74657273 746f6465 62726973 clusterstodebris\n+ 0x003fe628 2c436f6e 74696720 26206275 696c6463 ,Contig & buildc\n+ 0x003fe638 6f6e2c20 50506174 6866696e 64657220 on, PPathfinder \n+ 0x003fe648 26207161 66290000 75736520 67656e65 & qaf)..use gene\n+ 0x003fe658 72616c20 70617468 66696e64 65723a20 ral pathfinder: \n+ 0x003fe668 00000000 62666363 70320000 53746f72 ....bfccp2..Stor\n+ 0x003fe678 696e6720 636f6e74 6967202e 2e2e2000 ing contig ... .\n+ 0x003fe688 5472616e 73666f72 6d696e67 20434552 Transforming CER\n+ 0x003fe698 206d6170 70696e67 732e0000 646f6e65 mappings...done\n+ 0x003fe6a8 20747261 6e73666f 726d696e 67204345 transforming CE\n+ 0x003fe6b8 52206d61 7070696e 67732e00 5472616e R mappings..Tran\n+ 0x003fe6c8 73666572 696e6720 74616773 20746f20 sfering tags to \n+ 0x003fe6d8 72656164 706f6f6c 2e0a0000 53617669 readpool....Savi\n+ 0x003fe6e8 6e672043 4146202e 2e2e2000 53617669 ng CAF ... .Savi\n+ 0x003fe6f8 6e67204d 4146202e 2e2e2000 53617669 ng MAF ... .Savi\n+ 0x003fe708 6e672067 61703420 64697265 63742061 ng gap4 direct a\n+ 0x003fe718 7373656d 626c7920 2e2e2e20 00000000 ssembly ... ....\n+ 0x003fe728 53617669 6e672073 74726169 6e732061 Saving strains a\n+ 0x003fe738 73204641 53544120 2e2e2e20 00000000 s FASTA ... ....\n+ 0x003fe748 53617669 6e672046 41535441 202e2e2e Saving FASTA ...\n+ 0x003fe758 20000000 53617669 6e672054 4353202e ...Saving TCS .\n+ 0x003fe768 2e2e2000 53617669 6e672057 6967676c .. .Saving Wiggl\n+ 0x003fe778 65202e2e 2e200000 53617669 6e672074 e ... ..Saving t\n+ 0x003fe788 65787420 2e2e2e20 00000000 53617669 ext ... ....Savi\n+ 0x003fe798 6e672041 4345202e 2e2e2000 53617669 ng ACE ... .Savi\n+ 0x003fe7a8 6e672048 544d4c20 2e2e2e20 00000000 ng HTML ... ....\n+ 0x003fe7b8 53617669 6e672074 656d7020 43414620 Saving temp CAF \n+ 0x003fe7c8 2e2e2e20 00000000 53617669 6e672074 ... ....Saving t\n+ 0x003fe7d8 656d7020 4d414620 2e2e2e20 00000000 emp MAF ... ....\n+ 0x003fe7e8 53617669 6e672074 656d7020 67617034 Saving temp gap4\n+ 0x003fe7f8 20646972 65637420 61737365 6d626c79 direct assembly\n+ 0x003fe808 202e2e2e 20000000 53617669 6e672074 ... ...Saving t\n+ 0x003fe818 656d7020 46415354 41202e2e 2e200000 emp FASTA ... ..\n+ 0x003fe828 53617669 6e672074 656d7020 74657874 Saving temp text\n+ 0x003fe838 202e2e2e 20000000 53617669 6e672074 ... ...Saving t\n+ 0x003fe848 656d7020 41434520 2e2e2e20 00000000 emp ACE ... ....\n+ 0x003fe858 53617669 6e672074 656d7020 54435320 Saving temp TCS \n+ 0x003fe868 2e2e2e20 00000000 53617669 6e672074 ... ....Saving t\n+ 0x003fe878 656d7020 48544d4c 202e2e2e 20000000 emp HTML ... ...\n+ 0x003fe888 53617669 6e672073 656c6563 74656420 Saving selected \n+ 0x003fe898 64656272 69732061 73207369 6e676c65 debris as single\n+ 0x003fe8a8 74733a0a 00000000 4246433a 20000000 ts:.....BFC: ...\n+ 0x003fe8b8 5447533a 20000000 6f766572 6c617063 TGS: ...overlapc\n+ 0x003fe8c8 6f6d7072 65737373 74657070 696e673a ompressstepping:\n+ 0x003fe8d8 20000000 0a6e6578 746f7665 726c6170 ....nextoverlap\n+ 0x003fe8e8 636f6d70 72657373 3a200000 62666320 compress: ..bfc \n+ 0x003fe8f8 310a0000 62666320 320a0000 54696d69 1...bfc 2...Timi\n+ 0x003fe908 6e672042 46432070 72656c69 6d313a20 ng BFC prelim1: \n+ 0x003fe918 00000000 62666320 330a0000 62666320 ....bfc 3...bfc \n+ 0x003fe928 340a0000 54696d69 6e672042 46432064 4...Timing BFC d\n+ 0x003fe938 69736361 72642063 6f6e3a20 00000000 iscard con: ....\n+ 0x003fe948 2f6d6972 61746d70 2e706173 735f0000 /miratmp.pass_..\n+ 0x003fe958 5f636200 62666320 350a0000 62666320 _cb.bfc 5...bfc \n+ 0x003fe968 362f0000 62627265 6275696c 64202120 6/..bbrebuild ! \n+ 0x003fe978 41535f75 7365645f 6964735b 2e2e2e5d AS_used_ids[...]\n+ 0x003fe988 203f3f3f 00000000 766f6964 20417373 ???....void Ass\n+ 0x003fe998 656d626c 793a3a62 75696c64 46697273 embly::buildFirs\n+ 0x003fe9a8 74436f6e 74696773 28290000 54696d69 tContigs()..Timi\n+ 0x003fe9b8 6e672042 46432063 6f707920 6262636f ng BFC copy bbco\n+ 0x003fe9c8 6e3a2000 72656769 73746572 2041535f n: .register AS_\n+ 0x003fe9d8 75736564 5f696473 5b000000 5d3d3d00 used_ids[...]==.\n+ 0x003fe9e8 54696d69 6e672042 46432062 62736574 Timing BFC bbset\n+ 0x003fe9f8 75702072 656d6169 6e3a2000 62666320 up remain: .bfc \n+ 0x003fea08 372f0000 4275696c 64696e67 206e6577 7/..Building new\n+ 0x003fea18 20636f6e 74696720 00000000 2066726f contig .... fro\n+ 0x003fea28 6d206261 636b626f 6e652000 52656275 m backbone .Rebu\n+ 0x003fea38 696c6469 6e672063 6f6e7469 67200000 ilding contig ..\n+ 0x003fea48 53657474 696e6720 636f6e74 69672063 Setting contig c\n+ 0x003fea58 6f766572 61676520 74617267 65747320 overage targets \n+ 0x003fea68 746f3a20 00000000 556e7573 65642072 to: ....Unused r\n+ 0x003fea78 65616473 3a200000 62666320 382f0000 eads: ..bfc 8/..\n+ 0x003fea88 62666320 392f0000 5741524e 494e4720 bfc 9/..WARNING \n+ 0x003fea98 5741524e 494e4720 5741524e 494e4721 WARNING WARNING!\n+ 0x003feaa8 206e6f20 72656164 7320696e 20636f6e no reads in con\n+ 0x003feab8 7469673f 213f213f 21000000 54696d69 tig?!?!?!...Timi\n+ 0x003feac8 6e672042 46432070 65727369 7374656e ng BFC persisten\n+ 0x003fead8 7420736d 616c6c20 6f766572 6c617073 t small overlaps\n+ 0x003feae8 313a2000 44697363 61726469 6e670000 1: .Discarding..\n+ 0x003feaf8 4f6f6f6f 6f70732c 20726561 64206973 Ooooops, read is\n+ 0x003feb08 20616c72 65616479 20646562 7269733f already debris?\n+ 0x003feb18 20000000 44656272 69732066 726f6d20 ...Debris from \n+ 0x003feb28 616e2075 6e757365 64207265 61642069 an unused read i\n+ 0x003feb38 6e20636f 6e746967 3f200000 0a436f6e n contig? ...Con\n+ 0x003feb48 74696720 646f6573 206e6f74 206d6565 tig does not mee\n+ 0x003feb58 74207265 71756972 656d656e 74206f66 t requirement of\n+ 0x003feb68 206d696e 696d756d 20726561 64732070 minimum reads p\n+ 0x003feb78 65722063 6f6e7469 672e0a4d 6f766564 er contig..Moved\n+ 0x003feb88 20000000 20726561 64732074 6f206465 ... reads to de\n+ 0x003feb98 62726973 2e000000 0a0a4669 6e697368 bris......Finish\n+ 0x003feba8 65642062 75696c64 696e672e 00000000 ed building.....\n+ 0x003febb8 41737365 6d626c65 64207769 7468204d Assembled with M\n+ 0x003febc8 49524100 43616c63 756c6174 696e6720 IRA.Calculating \n+ 0x003febd8 73746174 69737469 63732028 74686973 statistics (this\n+ 0x003febe8 206d6179 2074616b 65206120 7768696c may take a whil\n+ 0x003febf8 65292e00 54696d69 6e672042 46432061 e)..Timing BFC a\n+ 0x003fec08 6e616c79 73657265 6164636f 763a2000 nalysereadcov: .\n+ 0x003fec18 54696d69 6e672042 46432063 6f757420 Timing BFC cout \n+ 0x003fec28 636f6e73 74617473 3a200000 62666320 constats: ..bfc \n+ 0x003fec38 31302f00 70726500 50200000 2c206d61 10/.pre.P .., ma\n+ 0x003fec48 726b6564 20000000 54696d69 6e672042 rked ...Timing B\n+ 0x003fec58 46432065 64697420 74726963 6b79313a FC edit tricky1:\n+ 0x003fec68 20000000 54696d69 6e672042 4643206d ...Timing BFC m\n+ 0x003fec78 61726b20 72657073 3a200000 62666320 ark reps: ..bfc \n+ 0x003fec88 31312f00 45646974 65642000 44656c65 11/.Edited .Dele\n+ 0x003fec98 74696e67 20737570 6572666c 756f7573 ting superfluous\n+ 0x003feca8 20676170 20636f6c 756d6e73 20283129 gap columns (1)\n+ 0x003fecb8 202e2e2e 20000000 646f6e65 2c206465 ... ...done, de\n+ 0x003fecc8 6c657465 64200000 20636f6c 756d6e73 leted .. columns\n+ 0x003fecd8 2e0a0000 54696d69 6e672042 46432065 ....Timing BFC e\n+ 0x003fece8 64697420 74726963 6b79323a 20000000 dit tricky2: ...\n+ 0x003fecf8 0a456469 74656420 00000000 20706f73 .Edited .... pos\n+ 0x003fed08 6974696f 6e732e0a 00000000 44656c65 itions......Dele\n+ 0x003fed18 74696e67 20737570 6572666c 756f7573 ting superfluous\n+ 0x003fed28 20676170 20636f6c 756d6e73 20283229 gap columns (2)\n+ 0x003fed38 202e2e2e 20000000 54696d69 6e672042 ... ...Timing B\n+ 0x003fed48 46432065 64697420 73696e67 6c652064 FC edit single d\n+ 0x003fed58 69736372 6570616e 63792c20 6e6f2048 iscrepancy, no H\n+ 0x003fed68 41463a20 00000000 62666320 31322f00 AF: ....bfc 12/.\n+ 0x003fed78 54696d69 6e672042 46432064 656c5053 Timing BFC delPS\n+ 0x003fed88 48503a20 00000000 62666320 31332f00 HP: ....bfc 13/.\n+ 0x003fed98 62666320 31342f00 706f7374 34353400 bfc 14/.post454.\n+ 0x003feda8 706f7374 00000000 4e6f2065 64697420 post....No edit \n+ 0x003fedb8 616e6420 6e6f206e 65772072 65706561 and no new repea\n+ 0x003fedc8 7420666f 756e642c 206e6f74 20736176 t found, not sav\n+ 0x003fedd8 696e6720 65787472 61207465 6d706f72 ing extra tempor\n+ 0x003fede8 61727920 636f6e74 69672061 6761696e ary contig again\n+ 0x003fedf8 2e0a0000 62666320 31352f00 62666320 ....bfc 15/.bfc \n+ 0x003fee08 31362f00 20547261 6e736665 72696e67 16/. Transfering\n+ 0x003fee18 20726561 64207461 67732074 6f207265 read tags to re\n+ 0x003fee28 6164706f 6f6c2e00 54696d69 6e672042 adpool..Timing B\n+ 0x003fee38 46432072 70207472 616e7366 65723a20 FC rp transfer: \n+ 0x003fee48 00000000 54696d69 6e672042 46432063 ....Timing BFC c\n+ 0x003fee58 72746167 32727020 7472616e 73666572 rtag2rp transfer\n+ 0x003fee68 3a200000 446f6e65 2e000000 62666320 : ..Done....bfc \n+ 0x003fee78 31372f00 49206861 7665206e 65777265 17/.I have newre\n+ 0x003fee88 70746d61 726b6564 20000000 20776173 ptmarked ... was\n+ 0x003fee98 6d616a6f 726f7665 7263616c 6c656469 majorovercalledi\n+ 0x003feea8 74656420 00000000 20636f6e 7469676e ted .... contign\n+ 0x003feeb8 6f746f6b 20000000 09636f6e 74696e75 otok ....continu\n+ 0x003feec8 65697465 723a2000 4964656e 74696669 eiter: .Identifi\n+ 0x003feed8 6564206d 69736173 73656d62 6c656420 ed misassembled \n+ 0x003feee8 72656164 7320696e 20636f6e 7469672e reads in contig.\n+ 0x003feef8 0a000000 48616420 6d616e79 206f7665 ....Had many ove\n+ 0x003fef08 7263616c 6c206564 69747320 696e2072 rcall edits in r\n+ 0x003fef18 65616473 2e0a0000 48617320 6261636b eads....Has back\n+ 0x003fef28 626f6e65 732c206e 6f206164 64697469 bones, no additi\n+ 0x003fef38 6f6e616c 20697465 72617469 6f6e2061 onal iteration a\n+ 0x003fef48 6c6c6f77 65642e0a 00000000 4e656564 llowed......Need\n+ 0x003fef58 20746f20 6c6f6f70 20636f6e 74696720 to loop contig \n+ 0x003fef68 6275696c 64696e67 0a000000 49746572 building....Iter\n+ 0x003fef78 6174696f 6e207769 6c6c206e 756b6520 ation will nuke \n+ 0x003fef88 636f6e74 69672062 75696c74 20736f20 contig built so \n+ 0x003fef98 6661722e 0a000000 49746572 6174696f far.....Iteratio\n+ 0x003fefa8 6e207769 6c6c206b 65657020 636f6e74 n will keep cont\n+ 0x003fefb8 69672062 75696c74 20736f20 6661722e ig built so far.\n+ 0x003fefc8 0a000000 62666320 31380a00 54696d69 ....bfc 18..Timi\n+ 0x003fefd8 6e672042 4643206d 61726b72 65702064 ng BFC markrep d\n+ 0x003fefe8 7572696e 67207374 6f72653a 20000000 uring store: ...\n+ 0x003feff8 0a416363 65707469 6e672070 726f6261 .Accepting proba\n+ 0x003ff008 626c7920 6d697361 7373656d 626c6564 bly misassembled\n+ 0x003ff018 20636f6e 7469672c 20000000 20627574 contig, ... but\n+ 0x003ff028 206b6570 74206f6e 6c792062 6573742c kept only best,\n+ 0x003ff038 206e6f6e 2d70726f 626c656d 61746963 non-problematic\n+ 0x003ff048 20706172 742e0a00 206b6565 70696e67 part... keeping\n+ 0x003ff058 20617320 69732e0a 00000000 62666320 as is......bfc \n+ 0x003ff068 31390a00 54696d69 6e672042 46432070 19..Timing BFC p\n+ 0x003ff078 65727369 7374656e 7420736d 616c6c20 ersistent small \n+ 0x003ff088 6f766572 6c617073 323a2000 62666320 overlaps2: .bfc \n+ 0x003ff098 32300a00 54696d69 6e672042 46432073 20..Timing BFC s\n+ 0x003ff0a8 746f7265 20636f6e 3a200000 436f6e74 tore con: ..Cont\n+ 0x003ff0b8 69672063 6f766572 61676520 616e616c ig coverage anal\n+ 0x003ff0c8 79736973 20000000 28746869 73206d61 ysis ...(this ma\n+ 0x003ff0d8 79207461 6b652061 20776869 6c652920 y take a while) \n+ 0x003ff0e8 00000000 4c617374 20626163 6b626f6e ....Last backbon\n+ 0x003ff0f8 65206d61 70706564 2c206e6f 74206275 e mapped, not bu\n+ 0x003ff108 696c6469 6e67206e 6577206f 6e65732e ilding new ones.\n+ 0x003ff118 0a4d6f76 65642000 2072656d 61696e69 .Moved . remaini\n+ 0x003ff128 6e672072 65616473 20746f20 64656272 ng reads to debr\n+ 0x003ff138 69732e0a 00000000 54696d69 6e672042 is......Timing B\n+ 0x003ff148 4643206c 6f6f7020 746f7461 6c3a2000 FC loop total: .\n+ 0x003ff158 54686572 65206172 65200000 206f6620 There are .. of \n+ 0x003ff168 796f7572 20726561 64732028 7e000000 your reads (~...\n+ 0x003ff178 25292064 65636c61 72656420 6173206d %) declared as m\n+ 0x003ff188 65676168 75627320 28746f6f 206d616e egahubs (too man\n+ 0x003ff198 7920706f 73736962 6c652063 6f6e6e65 y possible conne\n+ 0x003ff1a8 6374696f 6e732074 6f206f74 68657220 ctions to other \n+ 0x003ff1b8 72656164 73292061 6e642077 68657265 reads) and where\n+ 0x003ff1c8 20746865 20534b49 4d206661 7374206f the SKIM fast o\n+ 0x003ff1d8 7665726c 61702066 696e6465 72206469 verlap finder di\n+ 0x003ff1e8 64206e6f 74207265 7475726e 20656e6f d not return eno\n+ 0x003ff1f8 75676820 72657375 6c74732e 0a496620 ugh results..If \n+ 0x003ff208 796f7520 77616e74 2074686f 73652072 you want those r\n+ 0x003ff218 65616473 20746f20 62652066 6f756e64 eads to be found\n+ 0x003ff228 2028616e 64207375 62736571 75656e74 (and subsequent\n+ 0x003ff238 6c792061 7373656d 626c6564 292c2079 ly assembled), y\n+ 0x003ff248 6f75206e 65656420 746f2065 69746865 ou need to eithe\n+ 0x003ff258 720a2d20 73776974 6368206f 66662066 r.- switch off f\n+ 0x003ff268 696c7465 72696e67 206f6620 6d656761 iltering of mega\n+ 0x003ff278 68756273 20282d53 4b3a666d 683d6e6f hubs (-SK:fmh=no\n+ 0x003ff288 290a2d20 696e6372 65617365 20746865 ).- increase the\n+ 0x003ff298 2073697a 65206f66 20746865 206d6567 size of the meg\n+ 0x003ff2a8 61687562 20636170 20282d53 4b3a6d68 ahub cap (-SK:mh\n+ 0x003ff2b8 633d2e2e 2e290a42 65776172 6521204d c=...).Beware! M\n+ 0x003ff2c8 65676168 75627320 61726520 74686520 egahubs are the \n+ 0x003ff2d8 66697273 74206465 66656e73 65206d65 first defense me\n+ 0x003ff2e8 6368616e 69736d20 6f66204d 49524120 chanism of MIRA \n+ 0x003ff2f8 746f206b 65657020 61737365 6d626c79 to keep assembly\n+ 0x003ff308 2074696d 65732072 6561736f 6e61626c times reasonabl\n+ 0x003ff318 652e0000 20466f72 74756e61 74656c79 e... Fortunately\n+ 0x003ff328 2c207468 65206e75 6d626572 206f6620 , the number of \n+ 0x003ff338 6d656775 68627320 6973206c 6f772065 meguhbs is low e\n+ 0x003ff348 6e6f7567 6820746f 20736166 656c7920 nough to safely \n+ 0x003ff358 73776974 6368206f 66662066 696c7465 switch off filte\n+ 0x003ff368 72696e67 2e000000 20576974 68207468 ring.... With th\n+ 0x003ff378 6973206e 756d6265 72206f66 206d6567 is number of meg\n+ 0x003ff388 61687562 732c2074 68652061 7373656d ahubs, the assem\n+ 0x003ff398 626c7920 69732065 78706563 74656420 bly is expected \n+ 0x003ff3a8 746f2000 74616b65 20612063 6f75706c to .take a coupl\n+ 0x003ff3b8 65206f66 206d696e 75746573 206c6f6e e of minutes lon\n+ 0x003ff3c8 67657220 70657220 70617373 2c207377 ger per pass, sw\n+ 0x003ff3d8 69746368 696e6720 6f666620 66696c74 itching off filt\n+ 0x003ff3e8 6572696e 67207368 6f756c64 20626520 ering should be \n+ 0x003ff3f8 4f4b2e00 74616b65 20736f6d 65203330 OK..take some 30\n+ 0x003ff408 206d696e 75746573 20746f20 3120686f minutes to 1 ho\n+ 0x003ff418 7572206c 6f6e6765 72207065 72207061 ur longer per pa\n+ 0x003ff428 73732077 68656e20 73776974 6368696e ss when switchin\n+ 0x003ff438 67206f66 66206669 6c746572 696e672c g off filtering,\n+ 0x003ff448 20696620 796f7520 77616e74 20746f20 if you want to \n+ 0x003ff458 77616974 20666f72 20746861 742c204f wait for that, O\n+ 0x003ff468 4b2e0000 74616b65 20736f6d 65203120 K...take some 1 \n+ 0x003ff478 746f2035 20686f75 7273206c 6f6e6765 to 5 hours longe\n+ 0x003ff488 72207065 72207061 73732077 68656e20 r per pass when \n+ 0x003ff498 73776974 6368696e 67206f66 66206669 switching off fi\n+ 0x003ff4a8 6c746572 696e672c 20746861 74206361 ltering, that ca\n+ 0x003ff4b8 6e206765 74206c6f 6e672e00 74616b65 n get long..take\n+ 0x003ff4c8 203e3d20 3520686f 75727320 746f2073 >= 5 hours to s\n+ 0x003ff4d8 65766572 616c2064 61797320 6c6f6e67 everal days long\n+ 0x003ff4e8 65722070 65722070 61737320 7768656e er per pass when\n+ 0x003ff4f8 20737769 74636869 6e67206f 66662066 switching off f\n+ 0x003ff508 696c7465 72696e67 2c206f6e 6c792066 iltering, only f\n+ 0x003ff518 6f722064 69652d68 61726473 2e000000 or die-hards....\n+ 0x003ff528 554e4153 53454d42 4c45445f 4d454741 UNASSEMBLED_MEGA\n+ 0x003ff538 48554253 00000000 4d656761 68756220 HUBS....Megahub \n+ 0x003ff548 72656164 73206c61 6e646564 20696e20 reads landed in \n+ 0x003ff558 64656272 69732066 696c6500 25292063 debris file.%) c\n+ 0x003ff568 6f6e7461 696e696e 6720736f 206d616e ontaining so man\n+ 0x003ff578 79206261 73657320 6d61736b 65642061 y bases masked a\n+ 0x003ff588 73206e61 73747920 72657065 61747320 s nasty repeats \n+ 0x003ff598 74686174 20746865 20534b49 4d206661 that the SKIM fa\n+ 0x003ff5a8 7374206f 7665726c 61702066 696e6465 st overlap finde\n+ 0x003ff5b8 72206469 64206e6f 74207265 7475726e r did not return\n+ 0x003ff5c8 20656e6f 75676820 72657375 6c74732e enough results.\n+ 0x003ff5d8 0a496620 796f7520 77616e74 2074686f .If you want tho\n+ 0x003ff5e8 73652072 65616473 20746f20 62652066 se reads to be f\n+ 0x003ff5f8 6f756e64 2028616e 64207375 62736571 ound (and subseq\n+ 0x003ff608 75656e74 6c792061 7373656d 626c6564 uently assembled\n+ 0x003ff618 292c2079 6f75206e 65656420 746f2065 ), you need to e\n+ 0x003ff628 69746865 720a2d20 73776974 6368206f ither.- switch o\n+ 0x003ff638 6666206d 61736b69 6e67206f 66206e61 ff masking of na\n+ 0x003ff648 73747920 72657065 61747320 282d4853 sty repeats (-HS\n+ 0x003ff658 3a6d6e72 3d6e6f29 0a2d2069 6e637265 :mnr=no).- incre\n+ 0x003ff668 61736520 74686520 74686520 6e617374 ase the the nast\n+ 0x003ff678 79207265 70656174 20726174 696f2028 y repeat ratio (\n+ 0x003ff688 2d48533a 6e72723d 2e2e2e29 2028636f -HS:nrr=...) (co\n+ 0x003ff698 6e73756c 74207468 65206861 73682073 nsult the hash s\n+ 0x003ff6a8 74617469 73746963 7320696e 20746865 tatistics in the\n+ 0x003ff6b8 206f7574 70757420 6c6f6720 6f66204d output log of M\n+ 0x003ff6c8 49524120 746f2066 696e6420 6120676f IRA to find a go\n+ 0x003ff6d8 6f64206f 6e652900 0a2d2061 7320796f od one)..- as yo\n+ 0x003ff6e8 7520646f 20455354 2f524e41 53657120 u do EST/RNASeq \n+ 0x003ff6f8 61737365 6d626c79 2c206c6f 73736c65 assembly, lossle\n+ 0x003ff708 73732064 69676974 616c206e 6f726d61 ss digital norma\n+ 0x003ff718 6c697361 74696f6e 20282d48 533a6c64 lisation (-HS:ld\n+ 0x003ff728 6e3d7965 7329206d 61792061 6c736f20 n=yes) may also \n+ 0x003ff738 62652061 6e206f70 74696f6e 00000000 be an option....\n+ 0x003ff748 2c206275 7420796f 7520616c 72656164 , but you alread\n+ 0x003ff758 79206861 64206974 206f6e00 0a426577 y had it on..Bew\n+ 0x003ff768 61726521 204d6173 6b696e67 206f6620 are! Masking of \n+ 0x003ff778 6e617374 79207265 70656174 73206973 nasty repeats is\n+ 0x003ff788 20746865 20736563 6f6e6420 64656665 the second defe\n+ 0x003ff798 6e736520 6d656368 616e6973 6d206f66 nse mechanism of\n+ 0x003ff7a8 204d4952 41202861 66746572 206d6567 MIRA (after meg\n+ 0x003ff7b8 61687562 73292074 6f206b65 65702061 ahubs) to keep a\n+ 0x003ff7c8 7373656d 626c7920 74696d65 73207265 ssembly times re\n+ 0x003ff7d8 61736f6e 61626c65 2e204368 616e6769 asonable. Changi\n+ 0x003ff7e8 6e672074 68652064 65666175 6c747320 ng the defaults \n+ 0x003ff7f8 77696c6c 20696e63 72656173 65207468 will increase th\n+ 0x003ff808 65207469 6d65206e 65656465 642e0000 e time needed...\n+ 0x003ff818 20466f72 74756e61 74656c79 2c207468 Fortunately, th\n+ 0x003ff828 65206e75 6d626572 206f6620 636f6d70 e number of comp\n+ 0x003ff838 6c657465 6c79206d 61736b65 64207265 letely masked re\n+ 0x003ff848 61647320 6973206c 6f772065 6e6f7567 ads is low enoug\n+ 0x003ff858 6820746f 20736166 656c7920 73776974 h to safely swit\n+ 0x003ff868 6368206f 6666206d 61736b69 6e672e00 ch off masking..\n+ 0x003ff878 20576974 68207468 6973206e 756d6265 With this numbe\n+ 0x003ff888 72206f66 206d6173 6b656420 72656164 r of masked read\n+ 0x003ff898 732c2074 68652061 7373656d 626c7920 s, the assembly \n+ 0x003ff8a8 69732065 78706563 74656420 746f2000 is expected to .\n+ 0x003ff8b8 74616b65 20612063 6f75706c 65206f66 take a couple of\n+ 0x003ff8c8 206d696e 75746573 206c6f6e 67657220 minutes longer \n+ 0x003ff8d8 70657220 70617373 2c207377 69746368 per pass, switch\n+ 0x003ff8e8 696e6720 6f666620 6d61736b 696e6720 ing off masking \n+ 0x003ff8f8 73686f75 6c642062 65204f4b 2e000000 should be OK....\n+ 0x003ff908 74616b65 20736f6d 65203330 206d696e take some 30 min\n+ 0x003ff918 75746573 20746f20 3120686f 7572206c utes to 1 hour l\n+ 0x003ff928 6f6e6765 72207065 72207061 73732077 onger per pass w\n+ 0x003ff938 68656e20 73776974 6368696e 67206f66 hen switching of\n+ 0x003ff948 66206d61 736b696e 672c2069 6620796f f masking, if yo\n+ 0x003ff958 75207761 6e742074 6f207761 69742066 u want to wait f\n+ 0x003ff968 6f722074 6861742c 204f4b2e 00000000 or that, OK.....\n+ 0x003ff978 74616b65 20736f6d 65203120 746f2035 take some 1 to 5\n+ 0x003ff988 20686f75 7273206c 6f6e6765 72207065 hours longer pe\n+ 0x003ff998 72207061 73732077 68656e20 73776974 r pass when swit\n+ 0x003ff9a8 6368696e 67206f66 66206d61 736b696e ching off maskin\n+ 0x003ff9b8 672c2074 68617420 63616e20 67657420 g, that can get \n+ 0x003ff9c8 6c6f6e67 2e000000 74616b65 203e3d20 long....take >= \n+ 0x003ff9d8 3520686f 75727320 746f2073 65766572 5 hours to sever\n+ 0x003ff9e8 616c2064 61797320 6c6f6e67 65722070 al days longer p\n+ 0x003ff9f8 65722070 61737320 7768656e 20737769 er pass when swi\n+ 0x003ffa08 74636869 6e67206f 6666206d 61736b69 tching off maski\n+ 0x003ffa18 6e672c20 6f6e6c79 20666f72 20646965 ng, only for die\n+ 0x003ffa28 2d686172 64732e00 554e4153 53454d42 -hards..UNASSEMB\n+ 0x003ffa38 4c45445f 4e415354 59524550 45415453 LED_NASTYREPEATS\n+ 0x003ffa48 00000000 52656164 73207769 7468206d ....Reads with m\n+ 0x003ffa58 61736b65 64206e61 73747920 72657065 asked nasty repe\n+ 0x003ffa68 61747320 6c616e64 65642069 6e206465 ats landed in de\n+ 0x003ffa78 62726973 2066696c 65000000 0a427569 bris file....Bui\n+ 0x003ffa88 6c647374 61747320 2d20524d 20706f73 ldstats - RM pos\n+ 0x003ffa98 6974696f 6e732020 20202020 20203a09 itions :.\n+ 0x003ffaa8 00000000 0a427569 6c647374 61747320 .....Buildstats \n+ 0x003ffab8 2d206f76 65726361 6c6c2065 64697473 - overcall edits\n+ 0x003ffac8 20202020 20203a09 00000000 0a427569 :......Bui\n+ 0x003ffad8 6c647374 61747320 2d206861 73682065 ldstats - hash e\n+ 0x003ffae8 64697473 20202020 20202020 20203a09 dits :.\n+ 0x003ffaf8 00000000 0a427569 6c647374 61747320 .....Buildstats \n+ 0x003ffb08 2d20636f 6e746967 20646973 61737365 - contig disasse\n+ 0x003ffb18 6d626c69 65733a09 00000000 53657474 mblies:.....Sett\n+ 0x003ffb28 696e6720 636f7665 72616765 20616e61 ing coverage ana\n+ 0x003ffb38 6c797369 73207661 6c756573 20666f72 lysis values for\n+ 0x003ffb48 20756e69 666f726d 20726561 64206469 uniform read di\n+ 0x003ffb58 73747269 62757469 6f6e3a0a 00000000 stribution:.....\n+ 0x003ffb68 20636f76 65726167 653a0900 4461726e coverage:..Darn\n+ 0x003ffb78 2c206572 726f7220 77697468 20746861 , error with tha\n+ 0x003ffb88 7420636f 6e746967 2e205365 65206461 t contig. See da\n+ 0x003ffb98 726e2e66 61737461 2e0a0000 78787878 rn.fasta....xxxx\n+ 0x003ffba8 78787878 78787878 206d6172 6b200000 xxxxxxxx mark ..\n+ 0x003ffbb8 626f6f6c 20626f6f 73743a3a 72655f64 bool boost::re_d\n+ 0x003ffbc8 65746169 6c5f3130 37343030 3a3a7065 etail_107400::pe\n+ 0x003ffbd8 726c5f6d 61746368 65723c42 69646949 rl_matcher::unw\n+ 0x003ffc08 696e645f 66617374 5f646f74 5f726570 ind_fast_dot_rep\n+ 0x003ffc18 65617428 626f6f6c 29205b77 69746820 eat(bool) [with \n+ 0x003ffc28 42696469 49746572 61746f72 203d205f BidiIterator = _\n+ 0x003ffc38 5f676e75 5f637878 3a3a5f5f 6e6f726d _gnu_cxx::__norm\n+ 0x003ffc48 616c5f69 74657261 746f723c 636f6e73 al_iterator >; All\n+ 0x003ffc88 6f636174 6f72203d 20737464 3a3a616c ocator = std::al\n+ 0x003ffc98 6c6f6361 746f723c 626f6f73 743a3a73 locator > > >; trait\n+ 0x003ffd08 73203d20 626f6f73 743a3a72 65676578 s = boost::regex\n+ 0x003ffd18 5f747261 6974733c 63686172 3e5d0000 _traits]..\n+ 0x003ffd28 2f757372 2f696e63 6c756465 2f626f6f /usr/include/boo\n+ 0x003ffd38 73742f72 65676578 2f76342f 7065726c st/regex/v4/perl\n+ 0x003ffd48 5f6d6174 63686572 5f6e6f6e 5f726563 _matcher_non_rec\n+ 0x003ffd58 75727369 76652e68 70700000 636f756e ursive.hpp..coun\n+ 0x003ffd68 74203c20 7265702d 3e6d6178 00000000 t < rep->max....\n+ 0x003ffd78 626f6f6c 20626f6f 73743a3a 72655f64 bool boost::re_d\n+ 0x003ffd88 65746169 6c5f3130 37343030 3a3a7065 etail_107400::pe\n+ 0x003ffd98 726c5f6d 61746368 65723c42 69646949 rl_matcher::unw\n+ 0x003ffdc8 696e645f 67726565 64795f73 696e676c ind_greedy_singl\n+ 0x003ffdd8 655f7265 70656174 28626f6f 6c29205b e_repeat(bool) [\n+ 0x003ffde8 77697468 20426964 69497465 7261746f with BidiIterato\n+ 0x003ffdf8 72203d20 5f5f676e 755f6378 783a3a5f r = __gnu_cxx::_\n+ 0x003ffe08 5f6e6f72 6d616c5f 69746572 61746f72 _normal_iterator\n+ 0x003ffe18 3c636f6e 73742063 6861722a 2c207374 >\n+ 0x003ffe48 3b20416c 6c6f6361 746f7220 3d207374 ; Allocator = st\n+ 0x003ffe58 643a3a61 6c6c6f63 61746f72 3c626f6f d::allocator > > >; \n+ 0x003ffec8 74726169 7473203d 20626f6f 73743a3a traits = boost::\n+ 0x003ffed8 72656765 785f7472 61697473 3c636861 regex_traits].rep->next.p \n+ 0x003ffef8 213d2030 00000000 7265702d 3e616c74 != 0....rep->alt\n+ 0x003fff08 2e702021 3d203000 636f756e 74000000 .p != 0.count...\n+ 0x003fff18 54686520 61737365 6d626c65 64207072 The assembled pr\n+ 0x003fff28 6f6a6563 74206861 73200000 206f626a oject has .. obj\n+ 0x003fff38 65637473 2e0a0000 2e676170 34646100 ects.....gap4da.\n+ 0x003fff48 53617669 6e672063 6f6e7469 67732074 Saving contigs t\n+ 0x003fff58 6f206669 6c653a20 00000000 20626173 o file: .... bas\n+ 0x003fff68 65732028 636c6970 70656429 2e20546f es (clipped). To\n+ 0x003fff78 6f206c6f 6e672028 3e000000 4d6f7265 o long (>...More\n+ 0x003fff88 206c6f6e 67207265 61647320 6d617920 long reads may \n+ 0x003fff98 65786973 742c2062 75742073 746f7070 exist, but stopp\n+ 0x003fffa8 696e6720 6f757470 75742068 6572652e ing output here.\n+ 0x003fffb8 0a000000 20686173 20717561 6c697479 .... has quality\n+ 0x003fffc8 2076616c 75657320 3e313030 2c207468 values >100, th\n+ 0x003fffd8 69732069 7320696c 6c656761 6c2e0a00 is is illegal...\n+ 0x003fffe8 4d6f7265 20726561 64732077 69746820 More reads with \n+ 0x003ffff8 62616420 7175616c 73206d61 79206578 bad quals may ex\n+ 0x00400008 6973742c 20627574 2073746f 7070696e ist, but stoppin\n+ 0x00400018 67206f75 74707574 20686572 652e0a00 g output here...\n+ 0x00400028 4d495241 20666f75 6e642000 20766572 MIRA found . ver\n+ 0x00400038 79206c6f 6e672072 65616473 2028746f y long reads (to\n+ 0x00400048 6f206c6f 6e672066 6f72206e 6f726d61 o long for norma\n+ 0x00400058 6c207265 61647329 2c207365 65206c6f l reads), see lo\n+ 0x00400068 67206162 6f76652e 00000000 766f6964 g above.....void\n+ 0x00400078 20417373 656d626c 793a3a62 61736963 Assembly::basic\n+ 0x00400088 44617461 43686563 6b732829 00000000 DataChecks()....\n+ 0x00400098 20726561 64732077 69746820 696c6c65 reads with ille\n+ 0x004000a8 67616c20 7175616c 69746965 732c2073 gal qualities, s\n+ 0x004000b8 6565206c 6f672061 626f7665 2e000000 ee log above....\n+ 0x004000c8 20697320 696e2053 5241206e 616d696e is in SRA namin\n+ 0x004000d8 67207363 68656d65 2c207468 61742069 g scheme, that i\n+ 0x004000e8 7320756e 65787065 63746564 2e0a0000 s unexpected....\n+ 0x004000f8 4d6f7265 206d6179 20626520 70726573 More may be pres\n+ 0x00400108 656e7420 62757420 77696c6c 206e6f74 ent but will not\n+ 0x00400118 20626520 73686f77 6e20616e 796d6f72 be shown anymor\n+ 0x00400128 652e0a00 496e2072 65616467 726f7570 e...In readgroup\n+ 0x00400138 20000000 20286e61 6d65643a 20270000 ... (named: '..\n+ 0x00400148 27292c20 72656164 73206e61 6d657320 '), reads names \n+ 0x00400158 77657265 20666f75 6e642077 68696368 were found which\n+ 0x00400168 20736565 6d20746f 20666f6c 6c6f7720 seem to follow \n+ 0x00400178 74686520 53524120 6e616d69 6e672073 the SRA naming s\n+ 0x00400188 6368656d 65206275 74207468 65207265 cheme but the re\n+ 0x00400198 61646772 6f757020 646f6573 20686176 adgroup does hav\n+ 0x004001a8 65207468 65206e61 6d696e67 20736368 e the naming sch\n+ 0x004001b8 656d6520 27737261 272e2049 6e206361 eme 'sra'. In ca\n+ 0x004001c8 73652079 6f757220 72656164 73207765 se your reads we\n+ 0x004001d8 72652064 6f776e6c 6f616465 64206672 re downloaded fr\n+ 0x004001e8 6f6d2074 68652053 52412c20 69742069 om the SRA, it i\n+ 0x004001f8 73207374 726f6e67 6c792073 75676765 s strongly sugge\n+ 0x00400208 73746564 20746f20 74656c6c 204d4952 sted to tell MIR\n+ 0x00400218 41207468 61742079 6f757220 72656164 A that your read\n+ 0x00400228 206e616d 65732075 73652074 68652063 names use the c\n+ 0x00400238 6f727265 73706f6e 64696e67 206e616d orresponding nam\n+ 0x00400248 696e6720 73636865 6d652028 75736520 ing scheme (use \n+ 0x00400258 27736567 6d656e74 5f6e616d 696e673d 'segment_naming=\n+ 0x00400268 73726127 20696e20 74686520 6d616e69 sra' in the mani\n+ 0x00400278 66657374 292e0000 52454144 47524f55 fest)...READGROU\n+ 0x00400288 505f554e 45585045 43544544 5f535241 P_UNEXPECTED_SRA\n+ 0x00400298 4e414d45 535f0000 52656164 206e616d NAMES_..Read nam\n+ 0x004002a8 65732069 6e205352 41206e61 6d696e67 es in SRA naming\n+ 0x004002b8 20736368 656d6520 756e6578 70656374 scheme unexpect\n+ 0x004002c8 65642069 6e207265 61646772 6f757000 ed in readgroup.\n+ 0x004002d8 43686563 6b696e67 20706169 7273206f Checking pairs o\n+ 0x004002e8 66207265 61646772 6f757020 00000000 f readgroup ....\n+ 0x004002f8 27293a20 00000000 5741524e 494e473a '): ....WARNING:\n+ 0x00400308 20696e20 74686520 61626f76 65207265 in the above re\n+ 0x00400318 61646772 6f75702c 206e6f20 72656164 adgroup, no read\n+ 0x00400328 20697320 70616972 65642061 6c74686f is paired altho\n+ 0x00400338 75676820 74686520 6d616e69 66657374 ugh the manifest\n+ 0x00400348 20736179 73207468 65726520 73686f75 says there shou\n+ 0x00400358 6c642062 65207061 6972732e 20546869 ld be pairs. Thi\n+ 0x00400368 73206973 20666973 6879210a 00000000 s is fishy!.....\n+ 0x00400378 27292070 61697265 64207265 61647320 ') paired reads \n+ 0x00400388 77657265 20666f75 6e642062 7574206e were found but n\n+ 0x00400398 6f207061 6972696e 6720696e 666f726d o pairing inform\n+ 0x004003a8 6174696f 6e206769 76656e20 696e2074 ation given in t\n+ 0x004003b8 6865206d 616e6966 6573742e 204d4952 he manifest. MIR\n+ 0x004003c8 41207769 6c6c2065 7374696d 61746520 A will estimate \n+ 0x004003d8 2774656d 706c6174 655f7369 7a652720 'template_size' \n+ 0x004003e8 616e6420 27736567 6d656e74 5f706c61 and 'segment_pla\n+ 0x004003f8 63656d65 6e74272e 0a596f75 2063616e cement'..You can\n+ 0x00400408 20737570 70726573 73207468 69732077 suppress this w\n+ 0x00400418 61726e69 6e672062 79207573 696e6720 arning by using \n+ 0x00400428 74686520 6b657977 6f726420 27617574 the keyword 'aut\n+ 0x00400438 6f706169 72696e67 2720696e 20746865 opairing' in the\n+ 0x00400448 20726561 6467726f 75702064 6566696e readgroup defin\n+ 0x00400458 6974696f 6e206f66 20746865 206d616e ition of the man\n+ 0x00400468 69666573 74206669 6c652e00 0a4e6f74 ifest file...Not\n+ 0x00400478 65207468 61742074 68697320 6d617920 e that this may \n+ 0x00400488 62652063 61757365 64206279 20726561 be caused by rea\n+ 0x00400498 64732066 6f6c6c6f 77696e67 20746865 ds following the\n+ 0x004004a8 20535241 206e616d 696e6720 73636865 SRA naming sche\n+ 0x004004b8 6d652062 75742079 6f752068 6176696e me but you havin\n+ 0x004004c8 67206e6f 74207365 74207468 65206e61 g not set the na\n+ 0x004004d8 6d696e67 20736368 656d6520 6f662074 ming scheme of t\n+ 0x004004e8 68652072 65616467 726f7570 20746f20 he readgroup to \n+ 0x004004f8 62652027 73726127 2e000000 556e6578 be 'sra'....Unex\n+ 0x00400508 70656374 65642070 61697273 20696e20 pected pairs in \n+ 0x00400518 72656164 67726f75 70000000 52454144 readgroup...READ\n+ 0x00400528 47524f55 505f554e 45585045 43544544 GROUP_UNEXPECTED\n+ 0x00400538 5f504149 52530000 4d495241 20666f75 _PAIRS..MIRA fou\n+ 0x00400548 6e642072 65616467 726f7570 73207768 nd readgroups wh\n+ 0x00400558 65726520 70616972 73206172 65206578 ere pairs are ex\n+ 0x00400568 70656374 65642062 7574206e 6f207265 pected but no re\n+ 0x00400578 61642068 61732061 20706172 746e6572 ad has a partner\n+ 0x00400588 2e205365 65206c6f 67206162 6f766520 . See log above \n+ 0x00400598 616e6420 7468656e 20636865 636b2079 and then check y\n+ 0x004005a8 6f757220 696e7075 7420706c 65617365 our input please\n+ 0x004005b8 20286569 74686572 206d616e 69666573 (either manifes\n+ 0x004005c8 74206669 6c65206f 72206461 74612066 t file or data f\n+ 0x004005d8 696c6573 206c6f61 64656420 6f722073 iles loaded or s\n+ 0x004005e8 65676d65 6e745f6e 616d696e 67207363 egment_naming sc\n+ 0x004005f8 68656d65 292e0000 766f6964 20417373 heme)...void Ass\n+ 0x00400608 656d626c 793a3a62 61736963 52656164 embly::basicRead\n+ 0x00400618 47726f75 70436865 636b7328 29000000 GroupChecks()...\n+ 0x00400628 4d495241 20666f75 6e642072 65616467 MIRA found readg\n+ 0x00400638 726f7570 73207768 65726520 72656164 roups where read\n+ 0x00400648 206e616d 65732066 6f6c6c6f 77207468 names follow th\n+ 0x00400658 65205352 41206e61 6d696e67 20736368 e SRA naming sch\n+ 0x00400668 656d652c 20627574 20746861 74207761 eme, but that wa\n+ 0x00400678 73206e6f 74206578 70656374 65642c20 s not expected, \n+ 0x00400688 706c6561 73652073 6565206c 6f672061 please see log a\n+ 0x00400698 626f7665 2e0a5265 6d656469 65733a20 bove..Remedies: \n+ 0x004006a8 75736520 27736567 6d656e74 5f6e616d use 'segment_nam\n+ 0x004006b8 696e673d 73726127 20696e20 6d616e69 ing=sra' in mani\n+ 0x004006c8 66657374 2066696c 6520666f 72207468 fest file for th\n+ 0x004006d8 69732072 65616467 726f7570 206f7220 is readgroup or \n+ 0x004006e8 73776974 6368206f 66662074 68697320 switch off this \n+ 0x004006f8 7761726e 696e6720 76696120 2d4e573a warning via -NW:\n+ 0x00400708 6373726e 3d6e6f6e 65206f72 20776172 csrn=none or war\n+ 0x00400718 6e206f6e 6c792077 69746820 2d4e573a n only with -NW:\n+ 0x00400728 6373726e 3d776172 6e270000 4c697374 csrn=warn'..List\n+ 0x00400738 206f6620 72656164 206e616d 65732077 of read names w\n+ 0x00400748 68696368 20686176 65207072 6f626c65 hich have proble\n+ 0x00400758 6d732077 69746820 6e616d65 206c656e ms with name len\n+ 0x00400768 6774683a 0a000000 4e616d65 20746f6f gth:....Name too\n+ 0x00400778 206c6f6e 673a2000 20726561 64732068 long: . reads h\n+ 0x00400788 61642061 206c6f6e 67206e61 6d65206c ad a long name l\n+ 0x00400798 656e6774 682c2066 6f722062 72657669 ength, for brevi\n+ 0x004007a8 74792773 2073616b 65206e6f 7420616c ty's sake not al\n+ 0x004007b8 6c207765 7265206c 69737465 642e0a00 l were listed...\n+ 0x004007c8 20726561 64732077 65726520 64657465 reads were dete\n+ 0x004007d8 63746564 20776974 68206e61 6d657320 cted with names \n+ 0x004007e8 6c6f6e67 65722074 68616e20 00000000 longer than ....\n+ 0x004007f8 20636861 72616374 65727320 28736565 characters (see\n+ 0x00400808 206f7574 70757420 6c6f6720 666f7220 output log for \n+ 0x00400818 6d6f7265 20646574 61696c73 292e0a0a more details)...\n+ 0x00400828 5768696c 65204d49 52412061 6e64206d While MIRA and m\n+ 0x00400838 616e7920 6f746865 72207072 6f677261 any other progra\n+ 0x00400848 6d732068 61766520 6e6f2070 726f626c ms have no probl\n+ 0x00400858 656d2077 69746820 74686174 2c20736f em with that, so\n+ 0x00400868 6d65206f 6c646572 2070726f 6772616d me older program\n+ 0x00400878 73206861 76652072 65737472 69637469 s have restricti\n+ 0x00400888 6f6e7320 636f6e63 65726e69 6e672074 ons concerning t\n+ 0x00400898 6865206c 656e6774 68206f66 20746865 he length of the\n+ 0x004008a8 20726561 64206e61 6d652e0a 0a457861 read name...Exa\n+ 0x004008b8 6d706c65 20676976 656e3a20 74686520 mple given: the \n+ 0x004008c8 70697065 6c696e65 0a202020 20204341 pipeline. CA\n+ 0x004008d8 46202d3e 20636166 32676170 202d3e20 F -> caf2gap -> \n+ 0x004008e8 67617032 6361660a 77696c6c 2073746f gap2caf.will sto\n+ 0x004008f8 7020776f 726b696e 67206174 20746865 p working at the\n+ 0x00400908 20676170 32636166 20737461 67652069 gap2caf stage i\n+ 0x00400918 66207468 65726520 61726520 72656164 f there are read\n+ 0x00400928 206e616d 65732068 6176696e 67203e20 names having > \n+ 0x00400938 34302063 68617261 63746572 73207768 40 characters wh\n+ 0x00400948 65726520 74686520 6e616d65 73206469 ere the names di\n+ 0x00400958 66666572 206f6e6c 79206174 203e3430 ffer only at >40\n+ 0x00400968 20636861 72616374 6572732e 0a0a5468 characters...Th\n+ 0x00400978 69732069 73206120 7761726e 696e6720 is is a warning \n+ 0x00400988 6f6e6c79 2c206275 74206173 20612063 only, but as a c\n+ 0x00400998 6f75706c 65206f66 2070656f 706c6520 ouple of people \n+ 0x004009a8 77657265 20626974 74656e20 62792074 were bitten by t\n+ 0x004009b8 6869732c 20746865 20646566 61756c74 his, the default\n+ 0x004009c8 20626568 6176696f 7572206f 66204d49 behaviour of MI\n+ 0x004009d8 52412069 7320746f 2073746f 70207768 RA is to stop wh\n+ 0x004009e8 656e2069 74207365 65732074 68617420 en it sees that \n+ 0x004009f8 706f7465 6e746961 6c207072 6f626c65 potential proble\n+ 0x00400a08 6d2e0a0a 596f7520 6d696768 74207761 m...You might wa\n+ 0x00400a18 6e742074 6f207265 6e616d65 20796f75 nt to rename you\n+ 0x00400a28 72207265 61647320 746f2068 61766520 r reads to have \n+ 0x00400a38 3c3d2000 20636861 72616374 6572732e <= . characters.\n+ 0x00400a48 20496e73 74656164 206f6620 72656e61 Instead of rena\n+ 0x00400a58 6d696e67 20726561 64732069 6e207468 ming reads in th\n+ 0x00400a68 6520696e 70757420 66696c65 732c206d e input files, m\n+ 0x00400a78 61796265 20746865 20277265 6e616d65 aybe the 'rename\n+ 0x00400a88 5f707265 66697827 2066756e 6374696f _prefix' functio\n+ 0x00400a98 6e616c69 7479206f 66206d61 6e696665 nality of manife\n+ 0x00400aa8 73742066 696c6573 20697320 75736566 st files is usef\n+ 0x00400ab8 756c2066 6f722079 6f752074 68657265 ul for you there\n+ 0x00400ac8 2e0a0a4f 6e207468 65206f74 68657220 ...On the other \n+ 0x00400ad8 68616e64 2c20796f 7520616c 736f2063 hand, you also c\n+ 0x00400ae8 616e2069 676e6f72 65207468 69732070 an ignore this p\n+ 0x00400af8 6f74656e 7469616c 2070726f 626c656d otential problem\n+ 0x00400b08 20616e64 20666f72 6365204d 49524120 and force MIRA \n+ 0x00400b18 746f2063 6f6e7469 6e756520 62792075 to continue by u\n+ 0x00400b28 73696e67 20746865 20706172 616d6574 sing the paramet\n+ 0x00400b38 65723a20 272d4e57 3a636d72 6e6c3d77 er: '-NW:cmrnl=w\n+ 0x00400b48 61726e27 20206f72 2020272d 4e573a63 arn' or '-NW:c\n+ 0x00400b58 6d726e6c 3d6e6f27 0a000000 766f6964 mrnl=no'....void\n+ 0x00400b68 20417373 656d626c 793a3a63 6865636b Assembly::check\n+ 0x00400b78 466f7252 6561644e 616d654c 656e6774 ForReadNameLengt\n+ 0x00400b88 68287569 6e743332 2073746f 706c656e h(uint32 stoplen\n+ 0x00400b98 67746829 00000000 5741524e 494e4721 gth)....WARNING!\n+ 0x00400ba8 0a000000 4c6f6e67 20726561 64206e61 ....Long read na\n+ 0x00400bb8 6d657300 52454144 5f4e414d 455f544f mes.READ_NAME_TO\n+ 0x00400bc8 4f5f4c4f 4e470000 4c6f6767 696e6720 O_LONG..Logging \n+ 0x00400bd8 74686973 20636f6e 74696720 746f2066 this contig to f\n+ 0x00400be8 696c653a 20000000 4c6f6767 696e6720 ile: ...Logging \n+ 0x00400bf8 74686973 20636f6e 74696720 746f2066 this contig to f\n+ 0x00400c08 696c6573 3a200000 2020616e 64202000 iles: .. and .\n+ 0x00400c18 4c6f6767 696e6720 74686973 20636f6e Logging this con\n+ 0x00400c28 74696720 746f2064 69726563 746f7279 tig to directory\n+ 0x00400c38 3a200000 43616e6e 6f74206d 616b6520 : ..Cannot make \n+ 0x00400c48 73757265 20746865 20646972 6563746f sure the directo\n+ 0x00400c58 72792065 78697374 3f204162 6f727469 ry exist? Aborti\n+ 0x00400c68 6e672e00 766f6964 20417373 656d626c ng..void Assembl\n+ 0x00400c78 793a3a73 61766545 7874546d 70436f6e y::saveExtTmpCon\n+ 0x00400c88 74696728 7374643a 3a737472 696e6720 tig(std::string \n+ 0x00400c98 70726570 6f737429 00000000 2f666f66 prepost)..../fof\n+ 0x00400ca8 6e000000 4d495241 20666f75 6e642064 n...MIRA found d\n+ 0x00400cb8 75706c69 63617465 20726561 64206e61 uplicate read na\n+ 0x00400cc8 6d657320 696e2079 6f757220 64617461 mes in your data\n+ 0x00400cd8 20287365 65206c6f 67206162 6f766520 (see log above \n+ 0x00400ce8 666f7220 6d6f7265 20696e66 6f292e0a for more info)..\n+ 0x00400cf8 0a546869 73207368 6f756c64 206e6576 .This should nev\n+ 0x00400d08 65722c20 6e657665 72206265 210a0a59 er, never be!..Y\n+ 0x00400d18 6f75206d 61792068 61766520 6c6f6164 ou may have load\n+ 0x00400d28 65642061 2066696c 65206d6f 72652074 ed a file more t\n+ 0x00400d38 68616e20 6f6e6365 20696e20 74686520 han once in the \n+ 0x00400d48 6d616e69 66657374 206f720a 72656164 manifest or.read\n+ 0x00400d58 73206d61 79206265 20707265 73656e74 s may be present\n+ 0x00400d68 206d756c 7469706c 65207469 6d657320 multiple times \n+ 0x00400d78 6163726f 73732079 6f757220 696e7075 across your inpu\n+ 0x00400d88 74206669 6c652873 292e0a45 69746865 t file(s)..Eithe\n+ 0x00400d98 72207761 793a2066 69782074 68617421 r way: fix that!\n+ 0x00400da8 0a000000 766f6964 20417373 656d626c ....void Assembl\n+ 0x00400db8 793a3a70 6f73744c 6f616428 29000000 y::postLoad()...\n+ 0x00400dc8 43686563 6b696e67 20726561 64732066 Checking reads f\n+ 0x00400dd8 6f722074 72616365 20646174 6120286c or trace data (l\n+ 0x00400de8 6f616469 6e672071 75616c69 74696573 oading qualities\n+ 0x00400df8 20696620 6e656564 6564293a 0a000000 if needed):....\n+ 0x00400e08 556e6b6e 6f776e20 72656164 20286c6f Unknown read (lo\n+ 0x00400e18 61646564 20617320 6e756d62 65723a20 aded as number: \n+ 0x00400e28 00000000 4e6f2053 43462064 61746120 ....No SCF data \n+ 0x00400e38 70726573 656e7420 696e2061 6e792072 present in any r\n+ 0x00400e48 6561642c 20456449 74206175 746f6d61 ead, EdIt automa\n+ 0x00400e58 74696320 636f6e74 69672065 64697469 tic contig editi\n+ 0x00400e68 6e672066 6f722053 616e6765 72206461 ng for Sanger da\n+ 0x00400e78 74612069 73206e6f 77207377 69746368 ta is now switch\n+ 0x00400e88 6564206f 66662e0a 00000000 20726561 ed off...... rea\n+ 0x00400e98 64732077 69746820 76616c69 64206461 ds with valid da\n+ 0x00400ea8 74612066 6f722061 7373656d 626c792e ta for assembly.\n+ 0x00400eb8 0a000000 4e6f2076 616c6964 20726561 ....No valid rea\n+ 0x00400ec8 6420696e 20617373 656d626c 793f0000 d in assembly?..\n+ 0x00400ed8 4e6f2075 73656675 6c207465 6d706c61 No useful templa\n+ 0x00400ee8 74652069 6e666f72 6d617469 6f6e2066 te information f\n+ 0x00400ef8 6f756e64 2e0a0000 544f444f 3a204c69 ound....TODO: Li\n+ 0x00400f08 6b652052 65616470 6f6f6c3a 20737472 ke Readpool: str\n+ 0x00400f18 61696e20 78206861 73207920 72656164 ain x has y read\n+ 0x00400f28 730a0000 4e6f2071 75616c69 74792064 s...No quality d\n+ 0x00400f38 61746120 666f756e 643a2028 00000000 ata found: (....\n+ 0x00400f48 536f6d65 20726561 64732068 6164206e Some reads had n\n+ 0x00400f58 6f207175 616c6974 79207661 6c756573 o quality values\n+ 0x00400f68 20676976 656e2028 73656520 6c6f6720 given (see log \n+ 0x00400f78 61626f76 65292c0a 706c6561 73652063 above),.please c\n+ 0x00400f88 6865636b 20796f75 7220696e 70757420 heck your input \n+ 0x00400f98 64617461 2e0a4966 20737572 65207468 data..If sure th\n+ 0x00400fa8 61742074 68697320 6973206f 6b20666f at this is ok fo\n+ 0x00400fb8 7220796f 75722064 6174612c 20737769 r your data, swi\n+ 0x00400fc8 74636820 6f666620 74686973 20636865 tch off this che\n+ 0x00400fd8 636b2077 69746820 2d41533a 65706f71 ck with -AS:epoq\n+ 0x00400fe8 3d6e6f0a 666f7220 616e7920 73657175 =no.for any sequ\n+ 0x00400ff8 656e6369 6e672074 79706520 796f7520 encing type you \n+ 0x00401008 77697368 20285361 6e676572 2c203435 wish (Sanger, 45\n+ 0x00401018 342c2049 6f6e546f 7272656e 742c2050 4, IonTorrent, P\n+ 0x00401028 61636269 6f4c512c 20506163 62696f48 acbioLQ, PacbioH\n+ 0x00401038 512c2054 6578742c 20536f6c 6578612c Q, Text, Solexa,\n+ 0x00401048 202e2e2e 292e0a41 6c736f20 636f6e73 ...)..Also cons\n+ 0x00401058 69646572 20746865 20272d2d 6e6f7175 ider the '--noqu\n+ 0x00401068 616c6974 69657327 20706172 616d6574 alities' paramet\n+ 0x00401078 65722073 65747469 6e672e0a 416c7465 er setting..Alte\n+ 0x00401088 726e6174 6976656c 792c2079 6f752063 rnatively, you c\n+ 0x00401098 616e2066 6f726365 20746f20 73776974 an force to swit\n+ 0x004010a8 6368206f 66662074 68697320 63686563 ch off this chec\n+ 0x004010b8 6b20666f 72207370 65636966 69632072 k for specific r\n+ 0x004010c8 65616467 726f7570 73206279 20757369 eadgroups by usi\n+ 0x004010d8 6e672074 68652027 64656661 756c745f ng the 'default_\n+ 0x004010e8 7175616c 27207365 7474696e 6720696e qual' setting in\n+ 0x004010f8 20746865 206d616e 69666573 742e0000 the manifest...\n+ 0x00401108 53617669 6e672064 65627269 73206c69 Saving debris li\n+ 0x00401118 73742074 6f206669 6c653a20 00000000 st to file: ....\n+ 0x00401128 0953484f 52544f4e 4c4f4144 0a000000 .SHORTONLOAD....\n+ 0x00401138 09554e53 50454349 46494544 0a000000 .UNSPECIFIED....\n+ 0x00401148 094e4f5f 4f564552 4c41500a 00000000 .NO_OVERLAP.....\n+ 0x00401158 0946494c 5445525f 4d454741 4855420a .FILTER_MEGAHUB.\n+ 0x00401168 00000000 094d4153 4b45445f 4e415354 .....MASKED_NAST\n+ 0x00401178 595f5245 50454154 0a000000 094d4153 Y_REPEAT.....MAS\n+ 0x00401188 4b45445f 48414637 5f524550 4541540a KED_HAF7_REPEAT.\n+ 0x00401198 00000000 094d4153 4b45445f 48414636 .....MASKED_HAF6\n+ 0x004011a8 5f524550 4541540a 00000000 094e4f54 _REPEAT......NOT\n+ 0x004011b8 5f4d4150 5045440a 00000000 0941424f _MAPPED......ABO\n+ 0x004011c8 52544544 5f434f4e 5449475f 43524541 RTED_CONTIG_CREA\n+ 0x004011d8 54494f4e 0a000000 0954494e 595f434f TION.....TINY_CO\n+ 0x004011e8 4e544947 0a000000 0954494e 595f434c NTIG.....TINY_CL\n+ 0x004011f8 55535445 520a0000 0954494e 595f434c USTER....TINY_CL\n+ 0x00401208 55535445 525f4f52 5048414e 0a000000 USTER_ORPHAN....\n+ 0x00401218 09554e53 41564544 5f53494e 474c4554 .UNSAVED_SINGLET\n+ 0x00401228 0a000000 09444947 4954414c 5f4e4f52 .....DIGITAL_NOR\n+ 0x00401238 4d414c49 53415449 4f4e0a00 09434c49 MALISATION...CLI\n+ 0x00401248 505f4241 445f534f 4c455841 5f454e44 P_BAD_SOLEXA_END\n+ 0x00401258 0a000000 09434c49 505f4b4e 4f574e41 .....CLIP_KNOWNA\n+ 0x00401268 44415054 4f525249 4748540a 00000000 DAPTORRIGHT.....\n+ 0x00401278 09434c49 505f5155 414c4d49 4e544852 .CLIP_QUALMINTHR\n+ 0x00401288 4553484f 4c440a00 09434c49 505f4c4f ESHOLD...CLIP_LO\n+ 0x00401298 57455243 41534546 524f4e54 0a000000 WERCASEFRONT....\n+ 0x004012a8 09434c49 505f4c4f 57455243 41534542 .CLIP_LOWERCASEB\n+ 0x004012b8 41434b0a 00000000 09434c49 505f5155 ACK......CLIP_QU\n+ 0x004012c8 414c434c 4950530a 00000000 09434c49 ALCLIPS......CLI\n+ 0x004012d8 505f4d41 534b4544 42415345 530a0000 P_MASKEDBASES...\n+ 0x004012e8 09434c49 505f4241 44534551 55454e43 .CLIP_BADSEQUENC\n+ 0x004012f8 45534552 4143480a 00000000 09434c49 ESERACH......CLI\n+ 0x00401308 505f504f 4c594241 53454154 454e440a P_POLYBASEATEND.\n+ 0x00401318 00000000 09434c49 505f504f 4c594154 .....CLIP_POLYAT\n+ 0x00401328 0a000000 09434c49 505f4d49 4e4c4546 .....CLIP_MINLEF\n+ 0x00401338 54434c49 500a0000 09434c49 505f4d49 TCLIP....CLIP_MI\n+ 0x00401348 4e524947 4854434c 49500a00 09434c49 NRIGHTCLIP...CLI\n+ 0x00401358 505f5048 49583137 340a0000 09434c49 P_PHIX174....CLI\n+ 0x00401368 505f5252 4e410a00 09434c49 505f5252 P_RRNA...CLIP_RR\n+ 0x00401378 4e415f50 4149520a 00000000 09434c49 NA_PAIR......CLI\n+ 0x00401388 505f5052 4f504f53 4544454e 44434c49 P_PROPOSEDENDCLI\n+ 0x00401398 500a0000 09434c49 505f4348 494d4552 P....CLIP_CHIMER\n+ 0x004013a8 410a0000 09434c49 505f5445 524d494e A....CLIP_TERMIN\n+ 0x004013b8 414c4c59 494e434f 52524543 5449424c ALLYINCORRECTIBL\n+ 0x004013c8 454f5243 48494d45 52410a00 09434c49 EORCHIMERA...CLI\n+ 0x004013d8 505f494e 434f5252 45435449 424c4545 P_INCORRECTIBLEE\n+ 0x004013e8 4e444f52 4348494d 4552410a 00000000 NDORCHIMERA.....\n+ 0x004013f8 094e4f5f 434f4445 5f594554 3f5f0000 .NO_CODE_YET?_..\n+ 0x00401408 4e6f2072 65616420 77697468 20736571 No read with seq\n+ 0x00401418 75656e63 65206c65 6e677468 203e3020 uence length >0 \n+ 0x00401428 70726573 656e743f 20446964 20796f75 present? Did you\n+ 0x00401438 2070726f 76696465 20646174 6120746f provide data to\n+ 0x00401448 206c6f61 643f0000 766f6964 20417373 load?..void Ass\n+ 0x00401458 656d626c 793a3a61 64645261 696c7354 embly::addRailsT\n+ 0x00401468 6f426163 6b626f6e 65732829 00000000 oBackbones()....\n+ 0x00401478 2d414c3a 73686d65 20697320 3c20302c -AL:shme is < 0,\n+ 0x00401488 20617574 6f6d6174 6963616c 6c792064 automatically d\n+ 0x00401498 65746572 6d696e69 6e67206f 7074696d etermining optim\n+ 0x004014a8 616c2076 616c7565 2e0a0000 73657420 al value....set \n+ 0x004014b8 2d414c3a 73686d65 20000000 2d53423a -AL:shme ...-SB:\n+ 0x004014c8 62726c20 69732030 2c206175 746f6d61 brl is 0, automa\n+ 0x004014d8 74696361 6c6c7920 64657465 726d696e tically determin\n+ 0x004014e8 696e6720 6f707469 6d616c20 76616c75 ing optimal valu\n+ 0x004014f8 652e0a00 4f707469 6d616c20 7261696c e...Optimal rail\n+ 0x00401508 20776f75 6c642062 65206c6f 6e676572 would be longer\n+ 0x00401518 20746861 6e203332 6b2c2061 646a7573 than 32k, adjus\n+ 0x00401528 74696e67 20646f77 6e20746f 2033326b ting down to 32k\n+ 0x00401538 2e0a0000 62726c3a 20000000 2d53423a ....brl: ...-SB:\n+ 0x00401548 62726f20 69732030 2c206175 746f6d61 bro is 0, automa\n+ 0x00401558 74696361 6c6c7920 64657465 726d696e tically determin\n+ 0x00401568 696e6720 6f707469 6d616c20 76616c75 ing optimal valu\n+ 0x00401578 652e0a00 62726f3a 20000000 2d53423a e...bro: ...-SB:\n+ 0x00401588 62726f20 6973203e 3d202d53 423a6272 bro is >= -SB:br\n+ 0x00401598 6c202e2e 2e206164 6a757374 696e6720 l ... adjusting \n+ 0x004015a8 2d53423a 62726f20 746f2028 2d53423a -SB:bro to (-SB:\n+ 0x004015b8 62726c29 2d310a00 6e6f2062 61636b62 brl)-1..no backb\n+ 0x004015c8 6f6e6520 72656164 20666f75 6e642069 one read found i\n+ 0x004015d8 6e206261 636b626f 6e653f3f 3f000000 n backbone???...\n+ 0x004015e8 5f740000 434c4950 204d5347 3a207252 _t..CLIP MSG: rR\n+ 0x004015f8 4e412066 6f756e64 3a200000 3a20756e NA found: ..: un\n+ 0x00401608 61626c65 20746f20 6c6f6164 206f7220 able to load or \n+ 0x00401618 6f746865 72207265 61736f6e 20666f72 other reason for\n+ 0x00401628 20696e76 616c6964 20646174 612e0a00 invalid data...\n+ 0x00401638 20746f6f 20736d61 6c6c2061 6e64206e too small and n\n+ 0x00401648 6f207061 69726564 20656e64 0a000000 o paired end....\n+ 0x00401658 20746f6f 20736d61 6c6c2065 76656e20 too small even \n+ 0x00401668 77697468 20706169 72656420 656e640a with paired end.\n+ 0x00401678 00000000 20736176 65642062 79207061 .... saved by pa\n+ 0x00401688 69726564 2d656e64 0a000000 2f656c6f ired-end..../elo\n+ 0x00401698 672e7573 65646964 732e6c73 74000000 g.usedids.lst...\n+ 0x004016a8 2f6d6972 616c6f67 2e6e6f71 75616c69 /miralog.noquali\n+ 0x004016b8 74696573 00000000 20686173 20726769 ties.... has rgi\n+ 0x004016c8 64206f66 20303f3f 3f204f75 63682e00 d of 0??? Ouch..\n+ 0x004016d8 766f6964 20417373 656d626c 793a3a64 void Assembly::d\n+ 0x004016e8 756d7053 6f6d6553 74617469 73746963 umpSomeStatistic\n+ 0x004016f8 73282900 20686173 20726769 64206f66 s(). has rgid of\n+ 0x00401708 20000000 20616e64 206e756d 206f6620 ... and num of \n+ 0x00401718 72656164 67726f75 70732069 73200000 readgroups is ..\n+ 0x00401728 3f3f3f20 4f756368 2e000000 54797065 ??? Ouch....Type\n+ 0x00401738 20414249 20534f4c 6944206e 65656473 ABI SOLiD needs\n+ 0x00401748 206d6f72 65207375 70706f72 74203230 more support 20\n+ 0x00401758 612e0000 53657175 656e6369 6e672074 a...Sequencing t\n+ 0x00401768 79706520 00000000 20756e6b 6e6f776e ype .... unknown\n+ 0x00401778 3f0a0000 466f756e 6420756e 6b6e6f77 ?...Found unknow\n+ 0x00401788 6e207365 7175656e 63696e67 20747970 n sequencing typ\n+ 0x00401798 6520696e 20726561 642e0000 0a3d3d3d e in read....===\n 0x004017a8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x004017b8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x004017c8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x004017d8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x004017e8 0a000000 4261636b 626f6e65 733a2000 ....Backbones: .\n- 0x004017f8 09426163 6b626f6e 65207261 696c733a .Backbone rails:\n- 0x00401808 20000000 53657175 656e6369 6e672074 ...Sequencing t\n- 0x00401818 6563686e 6f6c6f67 79207374 61746973 echnology statis\n- 0x00401828 74696373 3a0a0000 09092d2d 2d2d2d2d tics:.....------\n- 0x00401838 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n+ 0x004017e8 3d3d3d3d 3d3d3d3d 0a000000 4261636b ========....Back\n+ 0x004017f8 626f6e65 733a2000 09426163 6b626f6e bones: ..Backbon\n+ 0x00401808 65207261 696c733a 20000000 53657175 e rails: ...Sequ\n+ 0x00401818 656e6369 6e672074 6563686e 6f6c6f67 encing technolog\n+ 0x00401828 79207374 61746973 74696373 3a0a0000 y statistics:...\n+ 0x00401838 09092d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ..--------------\n 0x00401848 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n 0x00401858 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d2d2d ----------------\n- 0x00401868 2d2d2d2d 2d2d0a00 546f7461 6c207265 ------..Total re\n- 0x00401878 61647300 52656164 7320776f 20717561 ads.Reads wo qua\n- 0x00401888 6c000000 55736564 20726561 64730000 l...Used reads..\n- 0x00401898 4176672e 20746f74 20726c65 6e000000 Avg. tot rlen...\n- 0x004018a8 4176672e 20757365 6420726c 656e0000 Avg. used rlen..\n- 0x004018b8 572f6f20 636c6970 73000000 0a0a5265 W/o clips.....Re\n- 0x004018c8 61646772 6f757020 73746174 69737469 adgroup statisti\n- 0x004018d8 63733a0a 00000000 3d3d3d3d 3d3d3d3d cs:.....========\n+ 0x00401868 2d2d2d2d 2d2d2d2d 2d2d2d2d 2d2d0a00 --------------..\n+ 0x00401878 546f7461 6c207265 61647300 52656164 Total reads.Read\n+ 0x00401888 7320776f 20717561 6c000000 55736564 s wo qual...Used\n+ 0x00401898 20726561 64730000 4176672e 20746f74 reads..Avg. tot\n+ 0x004018a8 20726c65 6e000000 4176672e 20757365 rlen...Avg. use\n+ 0x004018b8 6420726c 656e0000 572f6f20 636c6970 d rlen..W/o clip\n+ 0x004018c8 73000000 0a0a5265 61646772 6f757020 s.....Readgroup \n+ 0x004018d8 73746174 69737469 63733a0a 00000000 statistics:.....\n 0x004018e8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x004018f8 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x00401908 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n 0x00401918 3d3d3d3d 3d3d3d3d 3d3d3d3d 3d3d3d3d ================\n- 0x00401928 3d3d3d0a 0a000000 52472000 09617667 ===.....RG ..avg\n- 0x00401938 20746f74 616c206c 656e3a20 00000000 total len: ....\n- 0x00401948 09617667 20636c69 70206c65 6e3a2000 .avg clip len: .\n- 0x00401958 09746f74 616c2062 61736573 3a200000 .total bases: ..\n- 0x00401968 09757365 64206261 7365733a 20000000 .used bases: ...\n- 0x00401978 6d616e69 66657374 20656e74 72792073 manifest entry s\n- 0x00401988 61797320 746f206c 6f616420 61732062 ays to load as b\n- 0x00401998 61636b62 6f6e652c 20627574 20726561 ackbone, but rea\n- 0x004019a8 6467726f 75702069 73206e6f 74206261 dgroup is not ba\n- 0x004019b8 636b626f 6e653f00 766f6964 20417373 ckbone?.void Ass\n- 0x004019c8 656d626c 793a3a73 74726561 6d536571 embly::streamSeq\n- 0x004019d8 75656e63 65446174 6146726f 6d4d616e uenceDataFromMan\n- 0x004019e8 69666573 74287374 643a3a76 6563746f ifest(std::vecto\n- 0x004019f8 723c4d49 52415061 72616d65 74657273 r & miraparams, \n- 0x00401a18 4d616e69 66657374 2026206d 616e2c20 Manifest & man, \n- 0x00401a28 52656164 506f6f6c 20262072 65616470 ReadPool & readp\n- 0x00401a38 6f6f6c2c 20737464 3a3a6c69 73743c43 ool, std::list * contigs\n- 0x00401a58 7074722c 20737464 3a3a7665 63746f72 ptr, std::vector\n- 0x00401a68 3c726561 6469645f 743e202a 20726561 * rea\n- 0x00401a78 64736173 6261636b 626f6e65 636f6e74 dsasbackbonecont\n- 0x00401a88 69677329 00000000 4c6f6164 696e6720 igs)....Loading \n- 0x00401a98 72656164 73206f72 20617373 656d626c reads or assembl\n- 0x00401aa8 65642063 6f6e7469 67732000 61732072 ed contigs .as r\n- 0x00401ab8 65666572 656e6365 20626163 6b626f6e eference backbon\n- 0x00401ac8 65200000 20747970 65200000 4c6f6164 e .. type ..Load\n- 0x00401ad8 696e6720 72656665 72656e63 65206261 ing reference ba\n- 0x00401ae8 636b626f 6e652066 726f6d20 00000000 ckbone from ....\n- 0x00401af8 4c6f6164 696e6720 72656164 73206672 Loading reads fr\n- 0x00401b08 6f6d2000 636f6e74 61696e65 64200000 om .contained ..\n- 0x00401b18 20636f6e 74696773 2e204f6e 6c792074 contigs. Only t\n- 0x00401b28 68652063 6f6e7469 67732077 696c6c20 he contigs will \n- 0x00401b38 62652061 64646564 20617320 6261636b be added as back\n- 0x00401b48 626f6e65 2e0a0000 4265666f 72652073 bone....Before s\n- 0x00401b58 6f727469 6e673a20 74656d70 6c617465 orting: template\n- 0x00401b68 20706172 746e6572 73206861 76652074 partners have t\n- 0x00401b78 656d706c 61746520 6d69736d 61746368 emplate mismatch\n- 0x00401b88 21000000 536f7274 696e6720 72656164 !...Sorting read\n- 0x00401b98 73202e2e 2e200000 41535f64 65627269 s ... ..AS_debri\n- 0x00401ba8 73726561 736f6e2e 73697a65 28292021 sreason.size() !\n- 0x00401bb8 3d206475 6d6d792e 73697a65 28290000 = dummy.size()..\n- 0x00401bc8 766f6964 20417373 656d626c 793a3a73 void Assembly::s\n- 0x00401bd8 6f727452 65616450 6f6f6c28 29000000 ortReadPool()...\n- 0x00401be8 41667465 7220736f 7274696e 673a2074 After sorting: t\n- 0x00401bf8 656d706c 61746520 70617274 6e657273 emplate partners\n- 0x00401c08 20686176 65207465 6d706c61 7465206d have template m\n- 0x00401c18 69736d61 74636821 00000000 53617669 ismatch!....Savi\n- 0x00401c28 6e672072 65616467 726f7570 20696e66 ng readgroup inf\n- 0x00401c38 6f20746f 2066696c 653a2000 52656164 o to file: .Read\n- 0x00401c48 67726f75 70200000 2028756e 6e616d65 group .. (unname\n- 0x00401c58 64290a00 54656368 6e6f6c6f 67793a20 d)..Technology: \n- 0x00401c68 00000000 4e756d2e 20726561 64733a20 ....Num. reads: \n- 0x00401c78 00000000 20207468 6572656f 66206368 .... thereof ch\n- 0x00401c88 696d6572 613a2000 6d617962 65206e6f imera: .maybe no\n- 0x00401c98 74207365 61726368 65642066 6f723f00 t searched for?.\n- 0x00401ca8 252c2000 0a4c6962 72617279 20747970 %, ..Library typ\n- 0x00401cb8 653a2000 70616972 65642000 0a202020 e: .paired .. \n- 0x00401cc8 206d6561 6e3a2000 20737464 65763a20 mean: . stdev: \n- 0x00401cd8 00000000 20736b65 776e6573 733a2000 .... skewness: .\n- 0x00401ce8 0a202020 206d696e 3a200000 096d6178 . min: ...max\n- 0x00401cf8 3a200000 73686f74 67756e0a 00000000 : ..shotgun.....\n- 0x00401d08 44656c65 74696e67 20676170 20636f6c Deleting gap col\n- 0x00401d18 756d6e73 20696e20 6261636b 626f6e65 umns in backbone\n- 0x00401d28 73202e2e 2e200000 506f7374 70726f63 s ... ..Postproc\n- 0x00401d38 65737369 6e672062 61636b62 6f6e6528 essing backbone(\n- 0x00401d48 7329202e 2e2e2074 68697320 6d617920 s) ... this may \n- 0x00401d58 74616b65 20612077 68696c65 2e000000 take a while....\n- 0x00401d68 5e436f6e 7469675b 302d395d 2b240000 ^Contig[0-9]+$..\n- 0x00401d78 20746f20 70726f63 6573730a 00000000 to process.....\n- 0x00401d88 42616420 6e616d65 20666f72 20626163 Bad name for bac\n- 0x00401d98 6b626f6e 65207365 7175656e 63652000 kbone sequence .\n- 0x00401da8 4261636b 626f6e65 20736571 75656e63 Backbone sequenc\n- 0x00401db8 6573206d 6179204e 4f542062 65206e61 es may NOT be na\n- 0x00401dc8 6d652027 436f6e74 69675827 20776974 me 'ContigX' wit\n- 0x00401dd8 68202758 27206265 696e6720 616e7920 h 'X' being any \n- 0x00401de8 6e756d62 65722e0a 00000000 54686572 number......Ther\n- 0x00401df8 65277320 61206261 636b626f 6e652073 e's a backbone s\n- 0x00401e08 65717565 6e636520 286e756d 62657220 equence (number \n- 0x00401e18 00000000 29207769 74686f75 74206120 ....) without a \n- 0x00401e28 6e616d65 3f20546f 6f206261 642c206e name? Too bad, n\n- 0x00401e38 6f742061 6c6c6f77 65642e0a 00000000 ot allowed......\n- 0x00401e48 5f626200 536f6d65 20626163 6b626f6e _bb.Some backbon\n- 0x00401e58 65732068 61642065 69746865 72206e6f es had either no\n- 0x00401e68 206e616d 6573206f 72206120 62616420 names or a bad \n- 0x00401e78 6e616d65 20287365 65206c6f 67206162 name (see log ab\n- 0x00401e88 6f766529 2e205374 6f707069 6e672068 ove). Stopping h\n- 0x00401e98 6572652c 20666978 20796f75 72207365 ere, fix your se\n- 0x00401ea8 7175656e 6365206e 616d6573 2e0a0000 quence names....\n- 0x00401eb8 766f6964 20417373 656d626c 793a3a70 void Assembly::p\n- 0x00401ec8 6f73744c 6f616442 61636b62 6f6e6528 ostLoadBackbone(\n- 0x00401ed8 29000000 54686520 226a6f62 3d2e2e2e )...The \"job=...\n- 0x00401ee8 22206465 66696e69 74696f6e 206f6620 \" definition of \n- 0x00401ef8 74686520 6d616e69 66657374 20736179 the manifest say\n- 0x00401f08 7320796f 75207761 6e742061 206d6170 s you want a map\n- 0x00401f18 70696e67 20617373 656d626c 792c2062 ping assembly, b\n- 0x00401f28 7574206e 6f206261 636b626f 6e652073 ut no backbone s\n- 0x00401f38 65717565 6e636520 77617320 67697665 equence was give\n- 0x00401f48 6e20696e 20746865 20726561 6467726f n in the readgro\n- 0x00401f58 7570732e 0a0a4469 6420796f 7520666f ups...Did you fo\n- 0x00401f68 72676574 20616e20 2769735f 72656665 rget an 'is_refe\n- 0x00401f78 72656e63 65272069 6e206f6e 65206f66 rence' in one of\n- 0x00401f88 20746865 20726561 6467726f 7570733f the readgroups?\n- 0x00401f98 00000000 766f6964 20417373 656d626c ....void Assembl\n- 0x00401fa8 793a3a6c 6f616453 65717565 6e636544 y::loadSequenceD\n- 0x00401fb8 61746146 726f6d4d 616e6966 65737428 ataFromManifest(\n- 0x00401fc8 29000000 54686520 226a6f62 3d2e2e2e )...The \"job=...\n- 0x00401fd8 22206465 66696e69 74696f6e 206f6620 \" definition of \n- 0x00401fe8 74686520 6d616e69 66657374 20736179 the manifest say\n- 0x00401ff8 7320796f 75207761 6e742061 2064652d s you want a de-\n- 0x00402008 6e6f766f 20617373 656d626c 792c2062 novo assembly, b\n- 0x00402018 75742074 68657265 20697320 61206261 ut there is a ba\n- 0x00402028 636b626f 6e652f72 65666572 656e6365 ckbone/reference\n- 0x00402038 20736571 75656e63 65206769 76656e20 sequence given \n- 0x00402048 696e2074 68652072 65616467 726f7570 in the readgroup\n- 0x00402058 732e0a0a 54686973 20697320 6120736c s...This is a sl\n- 0x00402068 69676874 20636f6e 74726164 69637469 ight contradicti\n- 0x00402078 6f6e2c20 6d616b65 20757020 796f7572 on, make up your\n- 0x00402088 206d696e 6420706c 65617365 2e000000 mind please....\n- 0x00402098 6c6f6164 20616e63 696c6c61 72793a20 load ancillary: \n- 0x004020a8 00000000 4d657267 696e6720 616e6369 ....Merging anci\n- 0x004020b8 6c6c6172 79206461 74612000 786d6c00 llary data .xml.\n- 0x004020c8 73736168 61320000 736d616c 74000000 ssaha2..smalt...\n- 0x004020d8 556e6b6e 6f776e20 616e6369 6c6c6172 Unknown ancillar\n- 0x004020e8 79206669 6c652074 79706520 27000000 y file type '...\n- 0x004020f8 2720666f 72206461 74612027 00000000 ' for data '....\n- 0x00402108 270a0000 72656164 67726f75 70207769 '...readgroup wi\n- 0x00402118 74682069 6d706f73 7369626c 65207365 th impossible se\n- 0x00402128 7175656e 63696e67 20747970 6520666f quencing type fo\n- 0x00402138 756e643a 2073743d 00000000 20666f72 und: st=.... for\n- 0x00402148 20726561 6467726f 75700a00 4e6f7465 readgroup..Note\n- 0x00402158 3a200000 20726561 64732077 69746820 : .. reads with \n- 0x00402168 34353420 64617461 20686164 20717561 454 data had qua\n- 0x00402178 6c697479 20636c69 70732067 6976656e lity clips given\n- 0x00402188 2c206275 74206e6f 20736571 75656e63 , but no sequenc\n- 0x00402198 696e6720 76656374 6f722063 6c69702e ing vector clip.\n- 0x004021a8 0a000000 466f7220 4d495241 20746f20 ....For MIRA to \n- 0x004021b8 72756e20 70726f70 65726c79 20776974 run properly wit\n- 0x004021c8 68207265 61642065 7874656e 73696f6e h read extension\n- 0x004021d8 2c207468 6f736520 7175616c 69747920 , those quality \n- 0x004021e8 636c6970 73206861 76652062 65656e0a clips have been.\n- 0x004021f8 00000000 6368616e 67656420 746f2073 ....changed to s\n- 0x00402208 65717565 6e63696e 67207665 63746f72 equencing vector\n- 0x00402218 20636c69 70732e0a 0a000000 48617665 clips......Have\n- 0x00402228 20726561 6420706f 6f6c2077 69746820 read pool with \n- 0x00402238 00000000 52657375 6d652069 73206375 ....Resume is cu\n- 0x00402248 7272656e 746c7920 706f7373 69626c65 rrently possible\n- 0x00402258 206f6e6c 7920666f 72206465 2d6e6f76 only for de-nov\n- 0x00402268 6f206173 73656d62 6c696573 2c20736f o assemblies, so\n- 0x00402278 7272792e 00000000 766f6964 20417373 rry.....void Ass\n- 0x00402288 656d626c 793a3a6c 6f616453 65717565 embly::loadSeque\n- 0x00402298 6e636544 61746128 29000000 524c4520 nceData()...RLE \n- 0x004022a8 72656164 73202e2e 2e200000 54616767 reads ... ..Tagg\n- 0x004022b8 696e6720 72656164 73206279 20524c45 ing reads by RLE\n- 0x004022c8 202e2e2e 20000000 74797065 6e616d65 ... ...typename\n- 0x004022d8 20626f6f 73743a3a 64657461 696c3a3a boost::detail::\n- 0x004022e8 73705f6d 656d6265 725f6163 63657373 sp_member_access\n- 0x004022f8 3c543e3a 3a747970 6520626f 6f73743a ::type boost:\n- 0x00402308 3a736861 7265645f 7074723c 543e3a3a :shared_ptr::\n- 0x00402318 6f706572 61746f72 2d3e2829 20636f6e operator->() con\n- 0x00402328 7374205b 77697468 2054203d 20636f6e st [with T = con\n- 0x00402338 73742062 6f6f7374 3a3a7265 5f646574 st boost::re_det\n- 0x00402348 61696c5f 31303734 30303a3a 6370705f ail_107400::cpp_\n- 0x00402358 72656765 785f7472 61697473 5f696d70 regex_traits_imp\n- 0x00402368 6c656d65 6e746174 696f6e3c 63686172 lementation; typename boos\n- 0x00402388 743a3a64 65746169 6c3a3a73 705f6d65 t::detail::sp_me\n- 0x00402398 6d626572 5f616363 6573733c 543e3a3a mber_access::\n- 0x004023a8 74797065 203d2063 6f6e7374 20626f6f type = const boo\n- 0x004023b8 73743a3a 72655f64 65746169 6c5f3130 st::re_detail_10\n- 0x004023c8 37343030 3a3a6370 705f7265 6765785f 7400::cpp_regex_\n- 0x004023d8 74726169 74735f69 6d706c65 6d656e74 traits_implement\n- 0x004023e8 6174696f 6e3c6368 61723e2a 5d000000 ation*]...\n- 0x004023f8 2f757372 2f696e63 6c756465 2f626f6f /usr/include/boo\n- 0x00402408 73742f73 6d617274 5f707472 2f736861 st/smart_ptr/sha\n- 0x00402418 7265645f 7074722e 68707000 70782021 red_ptr.hpp.px !\n- 0x00402428 3d203000 766f6964 20626f6f 73743a3a = 0.void boost::\n- 0x00402438 6d617463 685f7265 73756c74 733c4269 match_results::set_firs\n- 0x00402468 74284269 64694974 65726174 6f722c20 t(BidiIterator, \n- 0x00402478 626f6f73 743a3a6d 61746368 5f726573 boost::match_res\n- 0x00402488 756c7473 3c426964 69497465 7261746f ults::s\n- 0x004024a8 697a655f 74797065 2c20626f 6f6c2920 ize_type, bool) \n- 0x004024b8 5b776974 68204269 64694974 65726174 [with BidiIterat\n- 0x004024c8 6f72203d 205f5f67 6e755f63 78783a3a or = __gnu_cxx::\n- 0x004024d8 5f5f6e6f 726d616c 5f697465 7261746f __normal_iterato\n- 0x004024e8 723c636f 6e737420 63686172 2a2c2073 r \n- 0x00402518 3e3b2041 6c6c6f63 61746f72 203d2073 >; Allocator = s\n- 0x00402528 74643a3a 616c6c6f 6361746f 723c626f td::allocator > > >;\n- 0x00402598 20626f6f 73743a3a 6d617463 685f7265 boost::match_re\n- 0x004025a8 73756c74 733c4269 64694974 65726174 sults::\n- 0x004025c8 73697a65 5f747970 65203d20 756e7369 size_type = unsi\n- 0x004025d8 676e6564 20696e74 5d000000 2f757372 gned int].../usr\n- 0x004025e8 2f696e63 6c756465 2f626f6f 73742f72 /include/boost/r\n- 0x004025f8 65676578 2f76342f 6d617463 685f7265 egex/v4/match_re\n- 0x00402608 73756c74 732e6870 70000000 706f732b sults.hpp...pos+\n- 0x00402618 32203c20 6d5f7375 62732e73 697a6528 2 < m_subs.size(\n- 0x00402628 29000000 626f6f6c 20626f6f 73743a3a )...bool boost::\n- 0x00402638 72655f64 65746169 6c5f3130 37343030 re_detail_107400\n- 0x00402648 3a3a7065 726c5f6d 61746368 65723c42 ::perl_matcher:\n- 0x00402678 3a756e77 696e645f 736c6f77 5f646f74 :unwind_slow_dot\n- 0x00402688 5f726570 65617428 626f6f6c 29205b77 _repeat(bool) [w\n- 0x00402698 69746820 42696469 49746572 61746f72 ith BidiIterator\n- 0x004026a8 203d205f 5f676e75 5f637878 3a3a5f5f = __gnu_cxx::__\n- 0x004026b8 6e6f726d 616c5f69 74657261 746f723c normal_iterator<\n- 0x004026c8 636f6e73 74206368 61722a2c 20737464 const char*, std\n- 0x004026d8 3a3a5f5f 63787831 313a3a62 61736963 ::__cxx11::basic\n- 0x004026e8 5f737472 696e673c 63686172 3e203e3b _string >;\n- 0x004026f8 20416c6c 6f636174 6f72203d 20737464 Allocator = std\n- 0x00402708 3a3a616c 6c6f6361 746f723c 626f6f73 ::allocator > > >; t\n- 0x00402778 72616974 73203d20 626f6f73 743a3a72 raits = boost::r\n- 0x00402788 65676578 5f747261 6974733c 63686172 egex_traits]..rep->type ==\n- 0x004027a8 2073796e 7461785f 656c656d 656e745f syntax_element_\n- 0x004027b8 646f745f 72657000 7265702d 3e6e6578 dot_rep.rep->nex\n- 0x004027c8 742e702d 3e747970 65203d3d 2073796e t.p->type == syn\n- 0x004027d8 7461785f 656c656d 656e745f 77696c64 tax_element_wild\n- 0x004027e8 00000000 626f6f6c 20626f6f 73743a3a ....bool boost::\n- 0x004027f8 72655f64 65746169 6c5f3130 37343030 re_detail_107400\n- 0x00402808 3a3a7065 726c5f6d 61746368 65723c42 ::perl_matcher:\n- 0x00402838 3a756e77 696e645f 63686172 5f726570 :unwind_char_rep\n- 0x00402848 65617428 626f6f6c 29205b77 69746820 eat(bool) [with \n- 0x00402858 42696469 49746572 61746f72 203d205f BidiIterator = _\n- 0x00402868 5f676e75 5f637878 3a3a5f5f 6e6f726d _gnu_cxx::__norm\n- 0x00402878 616c5f69 74657261 746f723c 636f6e73 al_iterator >; All\n- 0x004028b8 6f636174 6f72203d 20737464 3a3a616c ocator = std::al\n- 0x004028c8 6c6f6361 746f723c 626f6f73 743a3a73 locator > > >; trait\n- 0x00402938 73203d20 626f6f73 743a3a72 65676578 s = boost::regex\n- 0x00402948 5f747261 6974733c 63686172 3e5d0000 _traits]..\n- 0x00402958 7265702d 3e747970 65203d3d 2073796e rep->type == syn\n- 0x00402968 7461785f 656c656d 656e745f 63686172 tax_element_char\n- 0x00402978 5f726570 00000000 7265702d 3e6e6578 _rep....rep->nex\n- 0x00402988 742e702d 3e747970 65203d3d 2073796e t.p->type == syn\n- 0x00402998 7461785f 656c656d 656e745f 6c697465 tax_element_lite\n- 0x004029a8 72616c00 626f6f6c 20626f6f 73743a3a ral.bool boost::\n- 0x004029b8 72655f64 65746169 6c5f3130 37343030 re_detail_107400\n- 0x004029c8 3a3a7065 726c5f6d 61746368 65723c42 ::perl_matcher:\n- 0x004029f8 3a756e77 696e645f 73686f72 745f7365 :unwind_short_se\n- 0x00402a08 745f7265 70656174 28626f6f 6c29205b t_repeat(bool) [\n- 0x00402a18 77697468 20426964 69497465 7261746f with BidiIterato\n- 0x00402a28 72203d20 5f5f676e 755f6378 783a3a5f r = __gnu_cxx::_\n- 0x00402a38 5f6e6f72 6d616c5f 69746572 61746f72 _normal_iterator\n- 0x00402a48 3c636f6e 73742063 6861722a 2c207374 >\n- 0x00402a78 3b20416c 6c6f6361 746f7220 3d207374 ; Allocator = st\n- 0x00402a88 643a3a61 6c6c6f63 61746f72 3c626f6f d::allocator > > >; \n- 0x00402af8 74726169 7473203d 20626f6f 73743a3a traits = boost::\n- 0x00402b08 72656765 785f7472 61697473 3c636861 regex_traits].rep->type ==\n- 0x00402b28 2073796e 7461785f 656c656d 656e745f syntax_element_\n- 0x00402b38 73686f72 745f7365 745f7265 70000000 short_set_rep...\n- 0x00402b48 7265702d 3e6e6578 742e702d 3e747970 rep->next.p->typ\n- 0x00402b58 65203d3d 2073796e 7461785f 656c656d e == syntax_elem\n- 0x00402b68 656e745f 73657400 74797065 6e616d65 ent_set.typename\n- 0x00402b78 20626f6f 73743a3a 64657461 696c3a3a boost::detail::\n- 0x00402b88 73705f64 65726566 6572656e 63653c54 sp_dereference::type boost::s\n- 0x00402ba8 68617265 645f7074 723c543e 3a3a6f70 hared_ptr::op\n- 0x00402bb8 65726174 6f722a28 2920636f 6e737420 erator*() const \n- 0x00402bc8 5b776974 68205420 3d20626f 6f73743a [with T = boost:\n- 0x00402bd8 3a726567 65785f74 72616974 735f7772 :regex_traits_wr\n- 0x00402be8 61707065 723c626f 6f73743a 3a726567 apper \n- 0x00402c08 3e3b2074 7970656e 616d6520 626f6f73 >; typename boos\n- 0x00402c18 743a3a64 65746169 6c3a3a73 705f6465 t::detail::sp_de\n- 0x00402c28 72656665 72656e63 653c543e 3a3a7479 reference::ty\n- 0x00402c38 7065203d 20626f6f 73743a3a 72656765 pe = boost::rege\n- 0x00402c48 785f7472 61697473 5f777261 70706572 x_traits_wrapper\n- 0x00402c58 3c626f6f 73743a3a 72656765 785f7472 >&]..\n- 0x00402c78 636f6e73 7420626f 6f73743a 3a72655f const boost::re_\n- 0x00402c88 64657461 696c5f31 30373430 303a3a72 detail_107400::r\n- 0x00402c98 65676578 5f646174 613c6368 6172542c egex_data& boost:\n- 0x00402cb8 3a626173 69635f72 65676578 3c636861 :basic_regex::get\n- 0x00402cd8 5f646174 61282920 636f6e73 74205b77 _data() const [w\n- 0x00402ce8 69746820 63686172 54203d20 63686172 ith charT = char\n- 0x00402cf8 3b207472 61697473 203d2062 6f6f7374 ; traits = boost\n- 0x00402d08 3a3a7265 6765785f 74726169 74733c63 ::regex_traits].../usr/inc\n- 0x00402d28 6c756465 2f626f6f 73742f72 65676578 lude/boost/regex\n- 0x00402d38 2f76342f 62617369 635f7265 6765782e /v4/basic_regex.\n- 0x00402d48 68707000 3020213d 206d5f70 696d706c hpp.0 != m_pimpl\n- 0x00402d58 2e676574 28290000 626f6f6c 20626f6f .get()..bool boo\n- 0x00402d68 73743a3a 72655f64 65746169 6c5f3130 st::re_detail_10\n- 0x00402d78 37343030 3a3a7065 726c5f6d 61746368 7400::perl_match\n- 0x00402d88 65723c42 69646949 74657261 746f722c er::unwind_long\n- 0x00402db8 5f736574 5f726570 65617428 626f6f6c _set_repeat(bool\n- 0x00402dc8 29205b77 69746820 42696469 49746572 ) [with BidiIter\n- 0x00402dd8 61746f72 203d205f 5f676e75 5f637878 ator = __gnu_cxx\n- 0x00402de8 3a3a5f5f 6e6f726d 616c5f69 74657261 ::__normal_itera\n- 0x00402df8 746f723c 636f6e73 74206368 61722a2c tor >; Allocator =\n- 0x00402e38 20737464 3a3a616c 6c6f6361 746f723c std::allocator<\n- 0x00402e48 626f6f73 743a3a73 75625f6d 61746368 boost::sub_match\n- 0x00402e58 3c5f5f67 6e755f63 78783a3a 5f5f6e6f <__gnu_cxx::__no\n- 0x00402e68 726d616c 5f697465 7261746f 723c636f rmal_iterator > > \n- 0x00402ea8 3e3b2074 72616974 73203d20 626f6f73 >; traits = boos\n- 0x00402eb8 743a3a72 65676578 5f747261 6974733c t::regex_traits<\n- 0x00402ec8 63686172 3e5d0000 7265702d 3e747970 char>]..rep->typ\n- 0x00402ed8 65203d3d 2073796e 7461785f 656c656d e == syntax_elem\n- 0x00402ee8 656e745f 6c6f6e67 5f736574 5f726570 ent_long_set_rep\n- 0x00402ef8 00000000 7265702d 3e6e6578 742e702d ....rep->next.p-\n- 0x00402f08 3e747970 65203d3d 2073796e 7461785f >type == syntax_\n- 0x00402f18 656c656d 656e745f 6c6f6e67 5f736574 element_long_set\n- 0x00402f28 00000000 626f6f6c 20626f6f 73743a3a ....bool boost::\n- 0x00402f38 72655f64 65746169 6c5f3130 37343030 re_detail_107400\n- 0x00402f48 3a3a7065 726c5f6d 61746368 65723c42 ::perl_matcher:\n- 0x00402f78 3a6d6174 63685f63 6861725f 72657065 :match_char_repe\n- 0x00402f88 61742829 205b7769 74682042 69646949 at() [with BidiI\n- 0x00402f98 74657261 746f7220 3d205f5f 676e755f terator = __gnu_\n- 0x00402fa8 6378783a 3a5f5f6e 6f726d61 6c5f6974 cxx::__normal_it\n- 0x00402fb8 65726174 6f723c63 6f6e7374 20636861 erator >; Allocato\n- 0x00402ff8 72203d20 7374643a 3a616c6c 6f636174 r = std::allocat\n- 0x00403008 6f723c62 6f6f7374 3a3a7375 625f6d61 or >\n- 0x00403068 203e203e 3b207472 61697473 203d2062 > >; traits = b\n- 0x00403078 6f6f7374 3a3a7265 6765785f 74726169 oost::regex_trai\n- 0x00403088 74733c63 6861723e 5d000000 31203d3d ts]...1 ==\n- 0x00403098 20737461 7469635f 63617374 3c636f6e static_cast(\n- 0x004030b8 7265702d 3e6e6578 742e7029 2d3e6c65 rep->next.p)->le\n- 0x004030c8 6e677468 00000000 766f6964 20626f6f ngth....void boo\n- 0x004030d8 73743a3a 6d617463 685f7265 73756c74 st::match_result\n- 0x004030e8 733c4269 64694974 65726174 6f722c20 s::set_\n- 0x00403108 7365636f 6e642842 69646949 74657261 second(BidiItera\n- 0x00403118 746f722c 20626f6f 73743a3a 6d617463 tor, boost::matc\n- 0x00403128 685f7265 73756c74 733c4269 64694974 h_results::size_type, b\n- 0x00403158 6f6f6c2c 20626f6f 6c29205b 77697468 ool, bool) [with\n- 0x00403168 20426964 69497465 7261746f 72203d20 BidiIterator = \n- 0x00403178 5f5f676e 755f6378 783a3a5f 5f6e6f72 __gnu_cxx::__nor\n- 0x00403188 6d616c5f 69746572 61746f72 3c636f6e mal_iterator >; Al\n- 0x004031c8 6c6f6361 746f7220 3d207374 643a3a61 locator = std::a\n- 0x004031d8 6c6c6f63 61746f72 3c626f6f 73743a3a llocator > > >; boos\n- 0x00403248 743a3a6d 61746368 5f726573 756c7473 t::match_results\n- 0x00403258 3c426964 69497465 7261746f 722c2041 ::size_\n- 0x00403278 74797065 203d2075 6e736967 6e656420 type = unsigned \n- 0x00403288 696e745d 00000000 6d5f7375 62732e73 int]....m_subs.s\n- 0x00403298 697a6528 29203e20 706f7300 626f6f6c ize() > pos.bool\n- 0x004032a8 20626f6f 73743a3a 72655f64 65746169 boost::re_detai\n- 0x004032b8 6c5f3130 37343030 3a3a7065 726c5f6d l_107400::perl_m\n- 0x004032c8 61746368 65723c42 69646949 74657261 atcher::match_r\n- 0x004032f8 65637572 73696f6e 2829205b 77697468 ecursion() [with\n- 0x00403308 20426964 69497465 7261746f 72203d20 BidiIterator = \n- 0x00403318 5f5f676e 755f6378 783a3a5f 5f6e6f72 __gnu_cxx::__nor\n- 0x00403328 6d616c5f 69746572 61746f72 3c636f6e mal_iterator >; Al\n- 0x00403368 6c6f6361 746f7220 3d207374 643a3a61 locator = std::a\n- 0x00403378 6c6c6f63 61746f72 3c626f6f 73743a3a llocator > > >; trai\n- 0x004033e8 7473203d 20626f6f 73743a3a 72656765 ts = boost::rege\n- 0x004033f8 785f7472 61697473 3c636861 723e5d00 x_traits].\n- 0x00403408 70737461 74652d3e 74797065 203d3d20 pstate->type == \n- 0x00403418 73796e74 61785f65 6c656d65 6e745f72 syntax_element_r\n- 0x00403428 65637572 73650000 41747465 6d707420 ecurse..Attempt \n- 0x00403438 746f2061 63636573 7320616e 20756e69 to access an uni\n- 0x00403448 6e697469 616c697a 65642062 6f6f7374 nitialized boost\n- 0x00403458 3a3a6d61 7463685f 72657375 6c74733c ::match_results<\n- 0x00403468 3e20636c 6173732e 00000000 626f6f6c > class.....bool\n- 0x00403478 20626f6f 73743a3a 72655f64 65746169 boost::re_detai\n- 0x00403488 6c5f3130 37343030 3a3a7065 726c5f6d l_107400::perl_m\n- 0x00403498 61746368 65723c42 69646949 74657261 atcher::match_b\n- 0x004034c8 61636b72 65662829 205b7769 74682042 ackref() [with B\n- 0x004034d8 69646949 74657261 746f7220 3d205f5f idiIterator = __\n- 0x004034e8 676e755f 6378783a 3a5f5f6e 6f726d61 gnu_cxx::__norma\n- 0x004034f8 6c5f6974 65726174 6f723c63 6f6e7374 l_iterator >; Allo\n- 0x00403538 6361746f 72203d20 7374643a 3a616c6c cator = std::all\n- 0x00403548 6f636174 6f723c62 6f6f7374 3a3a7375 ocator > > >; traits\n- 0x004035b8 203d2062 6f6f7374 3a3a7265 6765785f = boost::regex_\n- 0x004035c8 74726169 74733c63 6861723e 5d000000 traits]...\n- 0x004035d8 2f757372 2f696e63 6c756465 2f626f6f /usr/include/boo\n- 0x004035e8 73742f72 65676578 2f76342f 7065726c st/regex/v4/perl\n- 0x004035f8 5f6d6174 63686572 5f636f6d 6d6f6e2e _matcher_common.\n- 0x00403608 68707000 722e6669 72737420 213d2072 hpp.r.first != r\n- 0x00403618 2e736563 6f6e6400 626f6f6c 20626f6f .second.bool boo\n- 0x00403628 73743a3a 72655f64 65746169 6c5f3130 st::re_detail_10\n- 0x00403638 37343030 3a3a7065 726c5f6d 61746368 7400::perl_match\n- 0x00403648 65723c42 69646949 74657261 746f722c er::match_match\n- 0x00403678 2829205b 77697468 20426964 69497465 () [with BidiIte\n- 0x00403688 7261746f 72203d20 5f5f676e 755f6378 rator = __gnu_cx\n- 0x00403698 783a3a5f 5f6e6f72 6d616c5f 69746572 x::__normal_iter\n- 0x004036a8 61746f72 3c636f6e 73742063 6861722a ator >; Allocator \n- 0x004036e8 3d207374 643a3a61 6c6c6f63 61746f72 = std::allocator\n- 0x004036f8 3c626f6f 73743a3a 7375625f 6d617463 > >\n- 0x00403758 203e3b20 74726169 7473203d 20626f6f >; traits = boo\n- 0x00403768 73743a3a 72656765 785f7472 61697473 st::regex_traits\n- 0x00403778 3c636861 723e5d00 30203d3d 20726563 ].0 == rec\n- 0x00403788 75727369 6f6e5f73 7461636b 2e626163 ursion_stack.bac\n- 0x00403798 6b28292e 69647800 766f6964 20626f6f k().idx.void boo\n- 0x004037a8 73743a3a 6d617463 685f7265 73756c74 st::match_result\n- 0x004037b8 733c4269 64694974 65726174 6f722c20 s::set_\n- 0x004037d8 7365636f 6e642842 69646949 74657261 second(BidiItera\n- 0x004037e8 746f7229 205b7769 74682042 69646949 tor) [with BidiI\n- 0x004037f8 74657261 746f7220 3d205f5f 676e755f terator = __gnu_\n- 0x00403808 6378783a 3a5f5f6e 6f726d61 6c5f6974 cxx::__normal_it\n- 0x00403818 65726174 6f723c63 6f6e7374 20636861 erator >; Allocato\n- 0x00403858 72203d20 7374643a 3a616c6c 6f636174 r = std::allocat\n- 0x00403868 6f723c62 6f6f7374 3a3a7375 625f6d61 or >\n- 0x004038c8 203e203e 5d000000 6d5f7375 62732e73 > >]...m_subs.s\n- 0x004038d8 697a6528 29203e20 32000000 626f6f6c ize() > 2...bool\n- 0x004038e8 20626f6f 73743a3a 72655f64 65746169 boost::re_detai\n- 0x004038f8 6c5f3130 37343030 3a3a7065 726c5f6d l_107400::perl_m\n- 0x00403908 61746368 65723c42 69646949 74657261 atcher::match_s\n- 0x00403938 74617274 6d61726b 2829205b 77697468 tartmark() [with\n- 0x00403948 20426964 69497465 7261746f 72203d20 BidiIterator = \n- 0x00403958 5f5f676e 755f6378 783a3a5f 5f6e6f72 __gnu_cxx::__nor\n- 0x00403968 6d616c5f 69746572 61746f72 3c636f6e mal_iterator >; Al\n- 0x004039a8 6c6f6361 746f7220 3d207374 643a3a61 locator = std::a\n- 0x004039b8 6c6c6f63 61746f72 3c626f6f 73743a3a llocator > > >; trai\n- 0x00403a28 7473203d 20626f6f 73743a3a 72656765 ts = boost::rege\n- 0x00403a38 785f7472 61697473 3c636861 723e5d00 x_traits].\n- 0x00403a48 616c742d 3e747970 65203d3d 2073796e alt->type == syn\n- 0x00403a58 7461785f 656c656d 656e745f 616c7400 tax_element_alt.\n- 0x00403a68 70737461 74652d3e 74797065 203d3d20 pstate->type == \n- 0x00403a78 73796e74 61785f65 6c656d65 6e745f73 syntax_element_s\n- 0x00403a88 74617274 6d61726b 00000000 696e6465 tartmark....inde\n- 0x00403a98 78203e20 30000000 626f6f73 743a3a72 x > 0...boost::r\n- 0x00403aa8 655f6465 7461696c 5f313037 3430303a e_detail_107400:\n- 0x00403ab8 3a736176 655f7374 6174655f 696e6974 :save_state_init\n- 0x00403ac8 3a3a7361 76655f73 74617465 5f696e69 ::save_state_ini\n- 0x00403ad8 7428626f 6f73743a 3a72655f 64657461 t(boost::re_deta\n- 0x00403ae8 696c5f31 30373430 303a3a73 61766564 il_107400::saved\n- 0x00403af8 5f737461 74652a2a 2c20626f 6f73743a _state**, boost:\n- 0x00403b08 3a72655f 64657461 696c5f31 30373430 :re_detail_10740\n- 0x00403b18 303a3a73 61766564 5f737461 74652a2a 0::saved_state**\n- 0x00403b28 29000000 2a656e64 203e202a 62617365 )...*end > *base\n- 0x00403b38 00000000 636f6e73 7420626f 6f73743a ....const boost:\n- 0x00403b48 3a72655f 64657461 696c5f31 30373430 :re_detail_10740\n- 0x00403b58 303a3a72 655f7379 6e746178 5f626173 0::re_syntax_bas\n- 0x00403b68 652a2062 6f6f7374 3a3a6261 7369635f e* boost::basic_\n- 0x00403b78 72656765 783c6368 6172542c 20747261 regex::get_first_\n- 0x00403b98 73746174 65282920 636f6e73 74205b77 state() const [w\n- 0x00403ba8 69746820 63686172 54203d20 63686172 ith charT = char\n- 0x00403bb8 3b207472 61697473 203d2062 6f6f7374 ; traits = boost\n- 0x00403bc8 3a3a7265 6765785f 74726169 74733c63 ::regex_traits]...void boo\n- 0x00403be8 73743a3a 6d617463 685f7265 73756c74 st::match_result\n- 0x00403bf8 733c4269 64694974 65726174 6f722c20 s::set_\n- 0x00403c18 66697273 74284269 64694974 65726174 first(BidiIterat\n- 0x00403c28 6f722920 5b776974 68204269 64694974 or) [with BidiIt\n- 0x00403c38 65726174 6f72203d 205f5f67 6e755f63 erator = __gnu_c\n- 0x00403c48 78783a3a 5f5f6e6f 726d616c 5f697465 xx::__normal_ite\n- 0x00403c58 7261746f 723c636f 6e737420 63686172 rator >; Allocator\n- 0x00403c98 203d2073 74643a3a 616c6c6f 6361746f = std::allocato\n- 0x00403ca8 723c626f 6f73743a 3a737562 5f6d6174 r > \n- 0x00403d08 3e203e5d 00000000 636f6e73 7420626f > >]....const bo\n- 0x00403d18 6f73743a 3a726567 65785f74 72616974 ost::regex_trait\n- 0x00403d28 735f7772 61707065 723c7472 61697473 s_wrapper& boost::basic_\n- 0x00403d48 72656765 783c6368 6172542c 20747261 regex::get_traits\n- 0x00403d68 28292063 6f6e7374 205b7769 74682063 () const [with c\n- 0x00403d78 68617254 203d2063 6861723b 20747261 harT = char; tra\n- 0x00403d88 69747320 3d20626f 6f73743a 3a726567 its = boost::reg\n- 0x00403d98 65785f74 72616974 733c6368 61723e5d ex_traits]\n- 0x00403da8 00000000 4e35626f 6f737431 30777261 ....N5boost10wra\n- 0x00403db8 70657863 65707449 53743131 6c6f6769 pexceptISt11logi\n- 0x00403dc8 635f6572 726f7245 45000000 52656d6f c_errorEE...Remo\n- 0x00403dd8 76652073 65493a20 00000000 53453a09 ve seI: ....SE:.\n- 0x00403de8 00000000 09643120 00000000 09643220 .....d1 .....d2 \n- 0x00403df8 00000000 09737220 00000000 73747265 .....sr ....stre\n- 0x00403e08 74636865 733a0a00 434f4e43 4f565f53 tches:..CONCOV_S\n- 0x00403e18 55535049 43494f55 535f4449 53545249 USPICIOUS_DISTRI\n- 0x00403e28 42555449 4f4e0000 53757370 6963696f BUTION..Suspicio\n- 0x00403e38 75732064 69737472 69627574 696f6e20 us distribution \n- 0x00403e48 6f662063 6f6e7469 6720636f 76657261 of contig covera\n- 0x00403e58 67657300 556d6d6d 6d202e2e 2e206e6f ges.Ummmm ... no\n- 0x00403e68 20636f6e 73206275 696c743f 3f3f0000 cons built???..\n- 0x00403e78 766f6964 20417373 656d626c 793a3a70 void Assembly::p\n- 0x00403e88 7269765f 72656d6f 7665506f 74656e74 riv_removePotent\n- 0x00403e98 69616c6c 7957726f 6e674261 7365496e iallyWrongBaseIn\n- 0x00403ea8 73657274 7328436f 6e746967 20262063 serts(Contig & c\n- 0x00403eb8 6f6e2900 0a506572 666f726d 696e6720 on)..Performing \n- 0x00403ec8 76656374 6f722063 6c697070 696e6720 vector clipping \n- 0x00403ed8 2e2e2e20 00000000 596f7520 61726520 ... ....You are \n- 0x00403ee8 72756e6e 696e6720 61206765 6e6f6d65 running a genome\n- 0x00403ef8 20000000 6d617070 696e6700 64652d6e ...mapping.de-n\n- 0x00403f08 6f766f00 20617373 656d626c 7920616e ovo. assembly an\n- 0x00403f18 64207468 65206375 7272656e 74206265 d the current be\n- 0x00403f28 73742065 7374696d 6174696f 6e20666f st estimation fo\n- 0x00403f38 72206176 65726167 6520636f 76657261 r average covera\n- 0x00403f48 67652069 73200000 7820286e 6f746520 ge is ..x (note \n- 0x00403f58 74686174 20746869 73206e75 6d626572 that this number\n- 0x00403f68 2063616e 20626520 2b2f2d20 32302520 can be +/- 20% \n- 0x00403f78 6f666620 74686520 7265616c 2076616c off the real val\n- 0x00403f88 7565292e 20546869 73206973 20000000 ue). This is ...\n- 0x00403f98 61207072 65747479 20686967 6820636f a pretty high co\n- 0x00403fa8 76657261 67652c00 68696768 65722074 verage,.higher t\n- 0x00403fb8 68616e20 74686520 63757272 656e7420 han the current \n- 0x00403fc8 7761726e 696e6720 74687265 73686f6c warning threshol\n- 0x00403fd8 64206f66 20000000 782e0a0a 596f7520 d of ...x...You \n- 0x00403fe8 73686f75 6c642074 72792074 6f206765 should try to ge\n- 0x00403ff8 74207468 65206176 65726167 6520636f t the average co\n- 0x00404008 76657261 6765206e 6f742068 69676865 verage not highe\n- 0x00404018 72207468 616e2c20 7361792c 20363078 r than, say, 60x\n- 0x00404028 20746f20 31303078 20666f72 20496c6c to 100x for Ill\n- 0x00404038 756d696e 61206461 7461206f 72203430 umina data or 40\n- 0x00404048 7820746f 20363078 20666f72 20343534 x to 60x for 454\n- 0x00404058 20616e64 20496f6e 20546f72 72656e74 and Ion Torrent\n- 0x00404068 20646174 612e2048 79627269 64206173 data. Hybrid as\n- 0x00404078 73656d62 6c696573 2073686f 756c6420 semblies should \n- 0x00404088 74617267 65742061 20746f74 616c2063 target a total c\n- 0x00404098 6f766572 61676520 6f662038 30782074 overage of 80x t\n- 0x004040a8 6f203130 30782061 73207570 70657220 o 100x as upper \n- 0x004040b8 626f756e 642e2046 6f722074 6861742c bound. For that,\n- 0x004040c8 20706c65 61736520 646f776e 73616d70 please downsamp\n- 0x004040d8 6c652079 6f757220 696e7075 74206461 le your input da\n- 0x004040e8 74612e0a 0a546869 73207761 726e696e ta...This warnin\n- 0x004040f8 67206861 73207477 6f206d61 6a6f7220 g has two major \n- 0x00404108 72656173 6f6e733a 0a2d2066 6f72204d reasons:.- for M\n- 0x00404118 49524120 616e6420 6f746865 72206f76 IRA and other ov\n- 0x00404128 65726c61 70206261 73656420 61737365 erlap based asse\n- 0x00404138 6d626c65 72732c20 74686520 72756e74 mblers, the runt\n- 0x00404148 696d6520 616e6420 6d656d6f 72792072 ime and memory r\n- 0x00404158 65717569 72656d65 6e747320 666f7220 equirements for \n- 0x00404168 756c7472 612d6869 67682063 6f766572 ultra-high cover\n- 0x00404178 61676520 70726f6a 65637473 2067726f age projects gro\n- 0x00404188 77206578 706f6e65 6e746961 6c6c792c w exponentially,\n- 0x00404198 20736f20 72656475 63696e67 20746865 so reducing the\n- 0x004041a8 20646174 61206865 6c707320 796f7520 data helps you \n- 0x004041b8 74686572 650a2d20 666f7220 616c6c20 there.- for all \n- 0x004041c8 61737365 6d626c65 72732c20 74686520 assemblers, the \n- 0x004041d8 636f6e74 69677569 7479206f 6620616e contiguity of an\n- 0x004041e8 20617373 656d626c 79206361 6e20616c assembly can al\n- 0x004041f8 736f2073 75666665 72206966 20746865 so suffer if the\n- 0x00404208 20636f76 65726167 65206973 20746f6f coverage is too\n- 0x00404218 20686967 682c2069 2e652e20 796f7520 high, i.e. you \n- 0x00404228 67657420 6d6f7265 20636f6e 74696773 get more contigs\n- 0x00404238 20746861 6e20796f 7520776f 756c6420 than you would \n- 0x00404248 6f746865 72776973 652e2043 61757365 otherwise. Cause\n- 0x00404258 7320666f 72207468 69732065 66666563 s for this effec\n- 0x00404268 74206361 6e206265 206e6f6e 2d72616e t can be non-ran\n- 0x00404278 646f6d20 73657175 656e6369 6e672065 dom sequencing e\n- 0x00404288 72726f72 73206f72 206c6f77 20667265 rrors or low fre\n- 0x00404298 7175656e 63792073 75622d70 6f70756c quency sub-popul\n- 0x004042a8 6174696f 6e732077 69746820 534e5073 ations with SNPs\n- 0x004042b8 20776869 63682062 65636f6d 65207374 which become st\n- 0x004042c8 726f6e67 20656e6f 75676820 746f2062 rong enough to b\n- 0x004042d8 65206d69 7374616b 656e2066 6f722070 e mistaken for p\n- 0x004042e8 6f737369 626c6520 72657065 6174732e ossible repeats.\n- 0x004042f8 00000000 0a412063 6f766572 61676520 .....A coverage \n- 0x00404308 6f66203e 33303078 202e2e2e 206e6f20 of >300x ... no \n- 0x00404318 7265616c 6c792c20 61726520 796f7520 really, are you \n- 0x00404328 6b696464 696e6720 6d653f20 2a736967 kidding me? *sig\n- 0x00404338 682a0000 0a576974 68207468 6520636f h*...With the co\n- 0x00404348 76657261 67652079 6f752063 75727265 verage you curre\n- 0x00404358 6e746c79 20686176 652c2079 6f75202a ntly have, you *\n- 0x00404368 7265616c 6c792a20 73686f75 6c642064 really* should d\n- 0x00404378 6f776e73 616d706c 6520796f 75722064 ownsample your d\n- 0x00404388 6174612e 20596f75 2e204861 76652e20 ata. You. Have. \n- 0x00404398 4265656e 2e205761 726e6564 21000000 Been. Warned!...\n- 0x004043a8 0a4f6620 636f7572 73652c20 796f7520 .Of course, you \n- 0x004043b8 63616e20 616c7761 79732063 686f6f73 can always choos\n- 0x004043c8 6520746f 2069676e 6f726520 74686573 e to ignore thes\n- 0x004043d8 65207761 726e696e 67206279 20636861 e warning by cha\n- 0x004043e8 6e67696e 67202d4e 573a6361 6320616e nging -NW:cac an\n- 0x004043f8 64202d4e 573a6163 762e0000 4153434f d -NW:acv...ASCO\n- 0x00404408 565f5645 52595f48 49474800 56657279 V_VERY_HIGH.Very\n- 0x00404418 20686967 68206176 65726167 6520636f high average co\n- 0x00404428 76657261 67650000 48617368 20616e61 verage..Hash ana\n- 0x00404438 6c797369 7320666f 72200000 70726f70 lysis for ..prop\n- 0x00404448 6f736564 20637574 6261636b 73000000 osed cutbacks...\n- 0x00404458 20616e64 20000000 6368696d 65726120 and ...chimera \n- 0x00404468 73656172 63680000 72656164 20656469 search..read edi\n- 0x00404478 74696e67 00000000 72617265 206b6d65 ting....rare kme\n- 0x00404488 72206d61 736b696e 67000000 436f756c r masking...Coul\n- 0x00404498 64206e6f 74206f70 656e206c 6f672066 d not open log f\n- 0x004044a8 6f722061 7070656e 64696e67 3a200000 or appending: ..\n- 0x004044b8 0a506f73 7369626c 65206361 75736573 .Possible causes\n- 0x004044c8 3a204469 736b2066 756c6c3f 20436861 : Disk full? Cha\n- 0x004044d8 6e676564 20706572 6d697373 696f6e73 nged permissions\n- 0x004044e8 3f204469 72656374 6f727920 64656c65 ? Directory dele\n- 0x004044f8 7465643f 00000000 766f6964 20417373 ted?....void Ass\n- 0x00404508 656d626c 793a3a70 6572666f 726d5072 embly::performPr\n- 0x00404518 6f706f73 65644375 74626163 6b436c69 oposedCutbackCli\n- 0x00404528 70732863 6f6e7374 20737464 3a3a7374 ps(const std::st\n- 0x00404538 72696e67 2026206c 6f676e61 6d652c20 ring & logname, \n- 0x00404548 636f6e73 74207374 643a3a73 7472696e const std::strin\n- 0x00404558 67202620 6c6f6770 72656669 78290000 g & logprefix)..\n- 0x00404568 2d434c3a 70656362 70682063 616e2072 -CL:pecbph can r\n- 0x00404578 756e206f 6e6c7920 77697468 20757020 un only with up \n- 0x00404588 746f2033 322c2079 6f752073 65742069 to 32, you set i\n- 0x00404598 7420746f 20000000 2e204d49 52412073 t to .... MIRA s\n- 0x004045a8 686f756c 64277665 20776172 6e656420 hould've warned \n- 0x004045b8 6561726c 69657220 74686f75 67682e0a earlier though..\n- 0x004045c8 00000000 2f706563 6b6d6572 73746174 ..../peckmerstat\n- 0x004045d8 2e6d6873 2e677a00 50657266 6f726d69 .mhs.gz.Performi\n- 0x004045e8 6e672050 45432053 44424720 65646974 ng PEC SDBG edit\n- 0x004045f8 733a0a00 48756e74 696e6720 646f776e s:..Hunting down\n- 0x00404608 20636869 6d657261 733a0a00 50454300 chimeras:..PEC.\n- 0x00404618 0a504543 20636869 6d657261 2074726f .PEC chimera tro\n- 0x00404628 70687920 636f756e 743a2000 41535f63 phy count: .AS_c\n- 0x00404638 75727265 6e745f72 6c735f62 7972672e urrent_rls_byrg.\n- 0x00404648 73697a65 28292000 20213d20 52656164 size() . != Read\n- 0x00404658 47726f75 704c6962 3a3a6765 744e756d GroupLib::getNum\n- 0x00404668 52656164 47726f75 70732829 20000000 ReadGroups() ...\n- 0x00404678 41535f63 75727265 6e745f72 6c735f62 AS_current_rls_b\n- 0x00404688 79747970 652e7369 7a652829 20000000 ytype.size() ...\n- 0x00404698 20213d20 52656164 47726f75 704c6962 != ReadGroupLib\n- 0x004046a8 3a3a6765 744e756d 53657175 656e6369 ::getNumSequenci\n- 0x004046b8 6e675479 70657328 29200000 52656c6f ngTypes() ..Relo\n- 0x004046c8 6164696e 67207374 61746973 74696373 ading statistics\n- 0x004046d8 20332000 0a504543 20534442 47206564 3 ..PEC SDBG ed\n- 0x004046e8 69746564 20726561 64733a20 00000000 ited reads: ....\n- 0x004046f8 52656c6f 6164696e 67207374 61746973 Reloading statis\n- 0x00404708 74696373 20342000 41737369 676e696e tics 4 .Assignin\n- 0x00404718 67207374 61746973 74696373 2076616c g statistics val\n- 0x00404728 75657320 2831293a 0a000000 48696768 ues (1):....High\n- 0x00404738 20617665 72616765 20636f76 65726167 average coverag\n- 0x00404748 65206465 74656374 65642c20 73656520 e detected, see \n- 0x00404758 6f757470 7574206c 6f672061 626f7665 output log above\n- 0x00404768 20726573 70656374 6976656c 79207468 respectively th\n- 0x00404778 65202757 41524e49 4e472720 66696c65 e 'WARNING' file\n- 0x00404788 7320696e 20746865 20696e66 6f206469 s in the info di\n- 0x00404798 72656374 6f727920 666f7220 6d6f7265 rectory for more\n- 0x004047a8 20696e66 6f726d61 74696f6e 2e20496e information. In\n- 0x004047b8 20636173 6520796f 75207769 73682074 case you wish t\n- 0x004047c8 6f20666f 72636520 4d495241 20746f20 o force MIRA to \n- 0x004047d8 64697372 65676172 64207468 69732073 disregard this s\n- 0x004047e8 61666574 79206368 65636b2c 20636f6e afety check, con\n- 0x004047f8 73696465 72207573 696e6720 272d4e57 sider using '-NW\n- 0x00404808 3a636163 3d776172 6e27206f 7220272d :cac=warn' or '-\n- 0x00404818 4e573a63 61633d6e 6f270000 67676300 NW:cac=no'..ggc.\n- 0x00404828 4c6f6f6b 696e6720 666f7220 70726f70 Looking for prop\n- 0x00404838 6f736564 20637574 6261636b 73202e2e osed cutbacks ..\n- 0x00404848 2e200000 206c6566 74200000 202d3e20 . .. left .. -> \n- 0x00404858 00000000 6b696c6c 65640a00 20726967 ....killed.. rig\n- 0x00404868 68742000 72706f73 3e722e67 65745269 ht .rpos>r.getRi\n- 0x00404878 67687443 6c69706f 66662829 203f3f3f ghtClipoff() ???\n- 0x00404888 00000000 706f7373 69626c65 20536f6c ....possible Sol\n- 0x00404898 65786120 4747432e 47207072 6f626c65 exa GGC.G proble\n- 0x004048a8 6d200000 206b696c 6c65642c 2072656d m .. killed, rem\n- 0x004048b8 61696e69 6e67206c 656e6774 68202800 aining length (.\n- 0x004048c8 646f6e65 2e0a5065 72666f72 6d656420 done..Performed \n- 0x004048d8 636c6970 733a0000 0a094e75 6d207265 clips:....Num re\n- 0x004048e8 61647320 636c6970 6564206c 6566743a ads cliped left:\n- 0x004048f8 20000000 0a094e75 6d207265 61647320 .....Num reads \n- 0x00404908 636c6970 65642072 69676874 3a200000 cliped right: ..\n- 0x00404918 0a094e75 6d207265 61647320 636f6d70 ..Num reads comp\n- 0x00404928 6c657465 6c79206b 696c6c65 643a2000 letely killed: .\n- 0x00404938 0a09546f 74616c20 62617365 7320636c ..Total bases cl\n- 0x00404948 69707065 64202020 20202020 20203a20 ipped : \n- 0x00404958 00000000 43616e6e 6f742070 6572666f ....Cannot perfo\n- 0x00404968 726d2061 20686173 6820616e 616c7973 rm a hash analys\n- 0x00404978 69732077 69746820 2d534b3a 62706820 is with -SK:bph \n- 0x00404988 3e203235 36202879 6f752075 73656420 > 256 (you used \n- 0x00404998 00000000 766f6964 20417373 656d626c ....void Assembl\n- 0x004049a8 793a3a70 6572666f 726d4861 7368416e y::performHashAn\n- 0x004049b8 616c7973 69732829 00000000 656c6f67 alysis()....elog\n- 0x004049c8 2e64702e 68617368 616e616c 79736973 .dp.hashanalysis\n- 0x004049d8 5f706173 73000000 656c6f67 20686173 _pass...elog has\n- 0x004049e8 68616e3a 20000000 0a4e6f20 76656374 han: ....No vect\n- 0x004049f8 6f722063 6c697070 696e6720 696e666f or clipping info\n- 0x00404a08 726d6174 696f6e20 61766169 6c61626c rmation availabl\n- 0x00404a18 652c2061 626f7274 696e6720 76656374 e, aborting vect\n- 0x00404a28 6f722063 6c69702e 0a000000 0a43616c or clip......Cal\n- 0x00404a38 63756c61 74696e67 20706f73 7369626c culating possibl\n- 0x00404a48 65207665 63746f72 206c6566 746f7665 e vector leftove\n- 0x00404a58 7273202e 2e2e2000 436c6970 70656420 rs ... .Clipped \n- 0x00404a68 00000000 20626173 6573206f 6e207468 .... bases on th\n- 0x00404a78 65206c65 6674206f 66200000 4e6f7420 e left of ..Not \n- 0x00404a88 636c6970 70656420 00000000 202c2074 clipped .... , t\n- 0x00404a98 6f6f206c 6f6e672e 0a000000 41727261 oo long.....Arra\n- 0x00404aa8 7973206d 69736d61 7463683f 20636875 ys mismatch? chu\n- 0x00404ab8 6e746c65 66746375 742e7369 7a652829 ntleftcut.size()\n- 0x00404ac8 213d6368 756e7472 69676874 6375742e !=chuntrightcut.\n- 0x00404ad8 73697a65 20262620 6368756e 746c6566 size && chuntlef\n- 0x00404ae8 74637574 2e73697a 65282920 213d2041 tcut.size() != A\n- 0x00404af8 535f7265 6164706f 6f6c2e73 697a6528 S_readpool.size(\n- 0x00404b08 29000000 766f6964 20417373 656d626c )...void Assembl\n- 0x00404b18 793a3a63 75744261 636b506f 73736962 y::cutBackPossib\n- 0x00404b28 6c654368 696d6572 61732863 6f6e7374 leChimeras(const\n- 0x00404b38 20737464 3a3a7374 72696e67 2026206c std::string & l\n- 0x00404b48 6f676e61 6d652c20 636f6e73 74207374 ogname, const st\n- 0x00404b58 643a3a73 7472696e 67202620 6c6f6770 d::string & logp\n- 0x00404b68 72656669 782c2063 6f6e7374 20737464 refix, const std\n- 0x00404b78 3a3a7665 63746f72 3c696e74 33323e20 ::vector \n- 0x00404b88 26206368 756e746c 65667463 75742c20 & chuntleftcut, \n- 0x00404b98 636f6e73 74207374 643a3a76 6563746f const std::vecto\n- 0x00404ba8 723c696e 7433323e 20262063 68756e74 r & chunt\n- 0x00404bb8 72696768 74637574 29000000 43757474 rightcut)...Cutt\n- 0x00404bc8 696e6720 6261636b 20706f73 7369626c ing back possibl\n- 0x00404bd8 65206368 696d6572 6173202e 2e2e2000 e chimeras ... .\n- 0x00404be8 20706f73 7369626c 65206368 696d6572 possible chimer\n- 0x00404bf8 613a2000 095b0000 5b207573 696e6720 a: ..[..[ using \n- 0x00404c08 63667261 67200000 20637574 20626163 cfrag .. cut bac\n- 0x00404c18 6b20746f 20000000 5b0a0000 2072656d k to ...[... rem\n- 0x00404c28 6f766564 20706f73 7369626c 65206a75 oved possible ju\n- 0x00404c38 6e6b3a20 00000000 20756e74 6f756368 nk: .... untouch\n- 0x00404c48 65642070 6f737369 626c6520 6a756e6b ed possible junk\n- 0x00404c58 3a200000 626f6f6c 20417373 656d626c : ..bool Assembl\n- 0x00404c68 793a3a77 61726e43 68696d65 7261436f y::warnChimeraCo\n- 0x00404c78 6e74656e 74282900 7374696c 6c206578 ntent().still ex\n- 0x00404c88 63656c6c 656e742c 206e6f20 6e656564 cellent, no need\n- 0x00404c98 20746f20 776f7272 79000000 6f6b2c20 to worry...ok, \n- 0x00404ca8 62757420 636f756c 64206265 20626574 but could be bet\n- 0x00404cb8 74657200 6e6f7420 676f6f64 00000000 ter.not good....\n- 0x00404cc8 6d656469 6f637265 00000000 696e6163 mediocre....inac\n- 0x00404cd8 63657074 61626c65 00000000 6162736f ceptable....abso\n- 0x00404ce8 6c757465 6c792061 7070616c 6c696e67 lutely appalling\n- 0x00404cf8 00000000 6120636f 6d706c65 74652063 ....a complete c\n- 0x00404d08 61746173 74726f70 68650000 61207265 atastrophe..a re\n- 0x00404d18 61736f6e 20746f20 73686f6f 74207468 ason to shoot th\n- 0x00404d28 65206861 72646469 736b2063 6f6e7461 e harddisk conta\n- 0x00404d38 696e696e 67207468 69732064 61746100 ining this data.\n- 0x00404d48 4d495241 20646574 65637465 64206368 MIRA detected ch\n- 0x00404d58 696d6572 69632073 65717565 6e636573 imeric sequences\n- 0x00404d68 20696e20 28617420 6c656173 7429206f in (at least) o\n- 0x00404d78 6e65206f 6620796f 75722072 65616467 ne of your readg\n- 0x00404d88 726f7570 732e2054 6865206d 6178696d roups. The maxim\n- 0x00404d98 756d2070 65726365 6e746167 6520666f um percentage fo\n- 0x00404da8 756e6420 77617320 00000000 3c302e30 und was ....<0.0\n- 0x00404db8 30350000 252e3266 00000000 252c2077 05..%.2f....%, w\n- 0x00404dc8 68696368 20697320 00000000 0a0a596f hich is ......Yo\n- 0x00404dd8 75722073 65717565 6e63696e 67207072 ur sequencing pr\n- 0x00404de8 6f766964 65722061 62736f6c 7574656c ovider absolutel\n- 0x00404df8 79206e65 65647320 746f2067 6574206c y needs to get l\n- 0x00404e08 6f776572 206e756d 62657273 2c207461 ower numbers, ta\n- 0x00404e18 6c6b2074 6f207468 656d2061 626f7574 lk to them about\n- 0x00404e28 2069742e 00000000 0a0a4920 73756767 it.......I sugg\n- 0x00404e38 65737420 796f7520 61736b20 796f7572 est you ask your\n- 0x00404e48 20736571 75656e63 696e6720 70726f76 sequencing prov\n- 0x00404e58 69646572 2061626f 75742074 6869732e ider about this.\n- 0x00404e68 00000000 0a0a4173 20746869 73206973 ......As this is\n- 0x00404e78 20612067 656e6f6d 65206173 73656d62 a genome assemb\n- 0x00404e88 6c792c20 796f7520 73686f75 6c642062 ly, you should b\n- 0x00404e98 65206162 6c652074 6f206765 74206177 e able to get aw\n- 0x00404ea8 61792077 69746820 69742e20 42757420 ay with it. But \n- 0x00404eb8 73686f75 6c642079 6f752075 73652074 should you use t\n- 0x00404ec8 68652073 616d6520 6c696272 61727920 he same library \n- 0x00404ed8 70726f74 6f636f6c 7320666f 72207365 protocols for se\n- 0x00404ee8 7175656e 63696e67 206f6620 524e4153 quencing of RNAS\n- 0x00404ef8 65712f45 53542064 6174612c 20746869 eq/EST data, thi\n- 0x00404f08 73207769 6c6c2063 72656174 65207072 s will create pr\n- 0x00404f18 6f626c65 6d732e00 0a0a5573 696e6720 oblems....Using \n- 0x00404f28 61206c69 62726172 79207769 74682074 a library with t\n- 0x00404f38 68697320 616d6f75 6e74206f 66206368 his amount of ch\n- 0x00404f48 696d6572 69632072 65616473 20697320 imeric reads is \n- 0x00404f58 76657279 2c207665 72792064 616e6765 very, very dange\n- 0x00404f68 726f7573 20696e20 524e4153 65712f45 rous in RNASeq/E\n- 0x00404f78 53542070 726f6a65 6374732e 00000000 ST projects.....\n- 0x00404f88 0a0a5468 65207265 61647320 64657465 ..The reads dete\n- 0x00404f98 63746564 20617320 6368696d 65726963 cted as chimeric\n- 0x00404fa8 20617265 2064656e 6f746564 20696e20 are denoted in \n- 0x00404fb8 74686520 27646562 72697327 2066696c the 'debris' fil\n- 0x00404fc8 6520696e 20746865 20696e66 6f206469 e in the info di\n- 0x00404fd8 72656374 6f72792c 20746865 20636f64 rectory, the cod\n- 0x00404fe8 65207468 65792061 7265206d 61726b65 e they are marke\n- 0x00404ff8 64207769 74682069 7320434c 49505f43 d with is CLIP_C\n- 0x00405008 48494d45 52410000 4348494d 45524943 HIMERA..CHIMERIC\n- 0x00405018 5f524541 44530000 52656164 67726f75 _READS..Readgrou\n- 0x00405028 70207769 74682063 68696d65 72696320 p with chimeric \n- 0x00405038 72656164 73000000 41544720 50524544 reads...ATG PRED\n- 0x00405048 49435449 4f4e530a 00000000 72676964 ICTIONS.....rgid\n- 0x00405058 3a200000 09633a20 00000000 0973703a : ...c: .....sp:\n- 0x00405068 20000000 29096d3a 20000000 09643a20 ...).m: ....d: \n- 0x00405078 00000000 09733a20 00000000 092d3a20 .....s: .....-: \n- 0x00405088 00000000 092b3a20 00000000 46696e61 .....+: ....Fina\n- 0x00405098 6c207072 65646963 74696f6e 3a200000 l prediction: ..\n- 0x004050a8 20697320 696e7661 6c69642e 00000000 is invalid.....\n- 0x004050b8 53657420 74656d70 6c617465 2073697a Set template siz\n- 0x004050c8 652e0a00 53657420 7365676d 656e7420 e...Set segment \n- 0x004050d8 706c6163 656d656e 7420636f 64652e0a placement code..\n- 0x004050e8 00000000 0a536561 72636869 6e672070 .....Searching p\n- 0x004050f8 6f737369 626c6520 72656164 20657874 ossible read ext\n- 0x00405108 656e7369 6f6e7320 28666f72 2053616e ensions (for San\n- 0x00405118 67657220 616e642f 6f722034 3534293a ger and/or 454):\n- 0x00405128 0a000000 766f6964 20417373 656d626c ....void Assembl\n- 0x00405138 793a3a65 7874656e 64414453 28696e74 y::extendADS(int\n- 0x00405148 33322076 65727369 6f6e2c20 636f6e73 32 version, cons\n- 0x00405158 74207374 643a3a73 7472696e 67207072 t std::string pr\n- 0x00405168 65666978 2c20636f 6e737420 7374643a efix, const std:\n- 0x00405178 3a737472 696e6720 706f7374 6669782c :string postfix,\n- 0x00405188 20636f6e 73742073 74643a3a 73747269 const std::stri\n- 0x00405198 6e67206c 6f676e61 6d652900 0a436861 ng logname)..Cha\n- 0x004051a8 6e676564 206c656e 67746820 6f662000 nged length of .\n- 0x004051b8 20736571 75656e63 65732e00 4d65616e sequences..Mean\n- 0x004051c8 206c656e 67746820 6761696e 65642069 length gained i\n- 0x004051d8 6e207468 65736520 73657175 656e6365 n these sequence\n- 0x004051e8 733a2000 766f6964 20417373 656d626c s: .void Assembl\n- 0x004051f8 793a3a70 7269765f 70686168 656c7065 y::priv_phahelpe\n- 0x00405208 72287569 6e743332 20626173 65737065 r(uint32 basespe\n- 0x00405218 72686173 682c2062 6f6f6c20 72617265 rhash, bool rare\n- 0x00405228 6b6d6572 66696e61 6c6b696c 6c2c2069 kmerfinalkill, i\n- 0x00405238 6e743332 20766572 73696f6e 2c20636f nt32 version, co\n- 0x00405248 6e737420 7374643a 3a737472 696e6720 nst std::string \n- 0x00405258 70726566 69782c20 636f6e73 74207374 prefix, const st\n- 0x00405268 643a3a73 7472696e 6720706f 73746669 d::string postfi\n- 0x00405278 782c2063 6f6e7374 20737464 3a3a7374 x, const std::st\n- 0x00405288 72696e67 206c6f67 6e616d65 29000000 ring logname)...\n- 0x00405298 73746174 69632062 6f6f6c20 52656164 static bool Read\n- 0x004052a8 47726f75 704c6962 3a3a7365 74536567 GroupLib::setSeg\n- 0x004052b8 6d656e74 506c6163 656d656e 74287267 mentPlacement(rg\n- 0x004052c8 69645f74 206c6962 69642c20 636f6e73 id_t libid, cons\n- 0x004052d8 7420696e 74382063 6f646529 00000000 t int8 code)....\n- 0x004052e8 4d61736b 696e6720 6f66206e 61737479 Masking of nasty\n- 0x004052f8 20726570 65617473 20737769 74636865 repeats switche\n- 0x00405308 64206f66 20617320 64696769 6e6f726d d of as diginorm\n- 0x00405318 20616c72 65616479 2072616e 2e0a0000 already ran....\n- 0x00405328 48412d00 0a48412d 00000000 52656c6f HA-..HA-....Relo\n- 0x00405338 6164696e 67207374 61746973 74696373 ading statistics\n- 0x00405348 20312000 50657266 6f726d69 6e672048 1 .Performing H\n- 0x00405358 41205344 42472065 64697473 3a0a0000 A SDBG edits:...\n- 0x00405368 0a484120 53444247 20656469 74656420 .HA SDBG edited \n- 0x00405378 72656164 733a2000 52656c6f 6164696e reads: .Reloadin\n- 0x00405388 67207374 61746973 74696373 20322000 g statistics 2 .\n- 0x00405398 45737469 6d61746f 72206f66 20617665 Estimator of ave\n- 0x004053a8 72616765 20636f76 65726167 653a2000 rage coverage: .\n- 0x004053b8 41737369 676e696e 67207374 61746973 Assigning statis\n- 0x004053c8 74696373 2076616c 75657320 2832293a tics values (2):\n- 0x004053d8 0a000000 41737369 676e696e 67207374 ....Assigning st\n- 0x004053e8 61746973 74696373 2076616c 75657320 atistics values \n- 0x004053f8 2833293a 0a000000 57726974 696e6720 (3):....Writing \n- 0x00405408 72656164 20726570 65617420 696e666f read repeat info\n- 0x00405418 20746f3a 20000000 20736571 75656e63 to: ... sequenc\n- 0x00405428 65732077 69746820 00000000 206d6173 es with .... mas\n- 0x00405438 6b656420 73747265 74636865 732e0000 ked stretches...\n- 0x00405448 50657266 6f726d69 6e672064 69676974 Performing digit\n- 0x00405458 616c206e 6f726d61 6c697361 74696f6e al normalisation\n- 0x00405468 3a200000 20202020 20202020 20202020 : .. \n- 0x00405478 20202020 20202020 20000000 41626f72 ...Abor\n- 0x00405488 743a2072 756e6177 61797374 6f700a00 t: runawaystop..\n- 0x00405498 0a202020 20202020 20202020 20202020 . \n- 0x004054a8 20202020 20200000 4c4f4355 53202020 ..LOCUS \n- 0x004054b8 20202020 00000000 20627020 20202044 .... bp D\n- 0x004054c8 4e412020 20202045 4e562020 20200000 NA ENV ..\n- 0x004054d8 25642d25 622d2559 00000000 534f5552 %d-%b-%Y....SOUR\n- 0x004054e8 43452020 20202020 00000000 444e412c CE ....DNA,\n- 0x004054f8 20737472 61696e3a 20000000 0a414343 strain: ....ACC\n- 0x00405508 45535349 4f4e2020 20000000 0a434f4d ESSION ....COM\n- 0x00405518 4d454e54 20202020 2047656e 65726174 MENT Generat\n- 0x00405528 65642062 79207468 65204d49 52412061 ed by the MIRA a\n- 0x00405538 7373656d 626c6572 0a464541 54555245 ssembler.FEATURE\n- 0x00405548 53202020 20202020 20202020 20204c6f S Lo\n- 0x00405558 63617469 6f6e2f51 75616c69 66696572 cation/Qualifier\n- 0x00405568 730a2020 20202073 6f757263 65202020 s. source \n- 0x00405578 20202020 20202031 2e2e0000 20202020 1.... \n- 0x00405588 20202020 20202020 20202020 20202020 \n- 0x00405598 202f7374 7261696e 3d220000 4f524947 /strain=\"..ORIG\n- 0x004055a8 494e0a00 636f6d70 6c656d65 6e742800 IN..complement(.\n- 0x004055b8 2f67656e 65000000 2f6c6f63 75735f74 /gene.../locus_t\n- 0x004055c8 61670000 2f66756e 6374696f 6e000000 ag../function...\n- 0x004055d8 2f45435f 6e756d62 65720000 2f70726f /EC_number../pro\n- 0x004055e8 64756374 00000000 2f6e6f74 65000000 duct..../note...\n- 0x004055f8 2f747261 6e736c61 74696f6e 00000000 /translation....\n- 0x00405608 4572726f 72207768 696c6520 64756d70 Error while dump\n- 0x00405618 696e6720 00000000 766f6964 2064756d ing ....void dum\n- 0x00405628 70436f6e 74696773 28737464 3a3a6c69 pContigs(std::li\n- 0x00405638 73743c43 6f6e7469 673e2026 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0x00405ed8 6e742d73 74796c65 3a206e6f 726d616c nt-style: normal\n- 0x00405ee8 203b0a20 20202020 666f6e74 2d66616d ;. font-fam\n- 0x00405ef8 696c793a 2073616e 732d7365 72696620 ily: sans-serif \n- 0x00405f08 3b200a20 20202020 666f6e74 2d776569 ; . font-wei\n- 0x00405f18 6768743a 206e6f72 6d616c20 3b0a2020 ght: normal ;. \n- 0x00405f28 20202074 6578742d 616c6967 6e3a206c text-align: l\n- 0x00405f38 65667420 3b200a20 20202020 76657274 eft ; . vert\n- 0x00405f48 6963616c 2d616c69 676e3a20 746f7020 ical-align: top \n- 0x00405f58 3b0a2020 20202070 61646469 6e673a20 ;. padding: \n- 0x00405f68 31307078 3b0a2020 207d0a0a 20202d2d 10px;. }.. --\n- 0x00405f78 3e0a3c2f 5354594c 453e0a3c 2f686561 >.</STYLE>.</hea\n- 0x00405f88 643e0a3c 626f6479 20544558 543d2223 d>.<body TEXT=\"#\n- 0x00405f98 30303030 30302220 4247434f 4c4f523d 000000\" BGCOLOR=\n- 0x00405fa8 22234646 46464646 22204c49 4e4b3d22 \"#FFFFFF\" LINK=\"\n- 0x00405fb8 23464630 30303022 20564c49 4e4b3d22 #FF0000\" VLINK=\"\n- 0x00405fc8 23353531 41384222 20414c49 4e4b3d22 #551A8B\" ALINK=\"\n- 0x00405fd8 23303030 30383822 3e0a0000 3c68313e #000088\">...<h1>\n- 0x00405fe8 3c63656e 7465723e 54616720 6c656765 <center>Tag lege\n- 0x00405ff8 6e643c2f 63656e74 65723e3c 2f68313e nd</center></h1>\n- 0x00406008 0a000000 3c63656e 7465723e 0a000000 ....<center>....\n- 0x00406018 3c746162 6c652043 454c4c53 50414349 <table CELLSPACI\n- 0x00406028 4e473d30 2043454c 4c504144 44494e47 NG=0 CELLPADDING\n- 0x00406038 3d30204e 4f534156 45203e0a 00000000 =0 NOSAVE >.....\n- 0x00406048 3c747220 616c6967 6e3d226c 65667422 <tr align=\"left\"\n- 0x00406058 3e3c7464 3e3c7474 3e3c5350 414e2043 ><td><tt><SPAN C\n- 0x00406068 4c415353 3d224643 4453223e 266e6273 LASS=\"FCDS\">&nbs\n- 0x00406078 703b3c2f 5350414e 3e203d20 46434453 p;</SPAN> = FCDS\n- 0x00406088 3b3c2f74 743e3c2f 74643e3c 74643e46 ;</tt></td><td>F\n- 0x00406098 65617475 72652043 44532028 636f6469 eature CDS (codi\n- 0x004060a8 6e672073 65717565 6e636529 3c2f7464 ng sequence)</td\n- 0x004060b8 3e3c2f74 723e0a00 3c747220 616c6967 ></tr>..<tr alig\n- 0x004060c8 6e3d226c 65667422 3e3c7464 3e3c7474 n=\"left\"><td><tt\n- 0x004060d8 3e3c5350 414e2043 4c415353 3d224674 ><SPAN CLASS=\"Ft\n- 0x004060e8 524e223e 266e6273 703b3c2f 5350414e RN\"> </SPAN\n- 0x004060f8 3e203d20 4674524e 3b3c2f74 743e3c2f > = FtRN;</tt></\n- 0x00406108 74643e3c 74643e74 524e413c 2f74643e td><td>tRNA</td>\n- 0x00406118 3c2f7472 3e0a0000 3c747220 616c6967 </tr>...<tr alig\n- 0x00406128 6e3d226c 65667422 3e3c7464 3e3c7474 n=\"left\"><td><tt\n- 0x00406138 3e3c5350 414e2043 4c415353 3d224672 ><SPAN CLASS=\"Fr\n- 0x00406148 524e223e 266e6273 703b3c2f 5350414e RN\"> </SPAN\n- 0x00406158 3e203d20 4672524e 3b3c2f74 743e3c2f > = FrRN;</tt></\n- 0x00406168 74643e3c 74643e72 524e413c 2f74643e td><td>rRNA</td>\n- 0x00406178 3c2f7472 3e0a0000 3c747220 616c6967 </tr>...<tr alig\n- 0x00406188 6e3d226c 65667422 3e3c7464 3e3c7474 n=\"left\"><td><tt\n- 0x00406198 3e3c5350 414e2043 4c415353 3d22466d ><SPAN CLASS=\"Fm\n- 0x004061a8 7852223e 266e6273 703b3c2f 5350414e xR\"> </SPAN\n- 0x004061b8 3e203d20 466d2d52 3b3c2f74 743e3c2f > = Fm-R;</tt></\n- 0x004061c8 74643e3c 74643e6d 6973632e 20524e41 td><td>misc. RNA\n- 0x004061d8 3c2f7464 3e3c2f74 723e0a00 3c747220 </td></tr>..<tr \n- 0x004061e8 616c6967 6e3d226c 65667422 3e3c7464 align=\"left\"><td\n- 0x004061f8 3e3c7474 3e3c5350 414e2043 4c415353 ><tt><SPAN CLASS\n- 0x00406208 3d224d49 534d223e 266e6273 703b3c2f =\"MISM\"> </\n- 0x00406218 5350414e 3e203d20 4d49534d 3b3c2f74 SPAN> = MISM;</t\n- 0x00406228 743e3c2f 74643e3c 74643e4d 69736d61 t></td><td>Misma\n- 0x00406238 74636820 28646973 63726570 616e6379 tch (discrepancy\n- 0x00406248 29206265 74776565 6e207265 61647320 ) between reads \n- 0x00406258 616e6420 636f6e73 656e7375 733c2f74 and consensus</t\n- 0x00406268 643e3c2f 74723e0a 00000000 3c747220 d></tr>.....<tr \n- 0x00406278 616c6967 6e3d226c 65667422 3e3c7464 align=\"left\"><td\n- 0x00406288 3e3c7474 3e3c5350 414e2043 4c415353 ><tt><SPAN CLASS\n- 0x00406298 3d225352 4d72223e 266e6273 703b3c2f =\"SRMr\"> </\n- 0x004062a8 5350414e 3e203d20 53524d78 3b3c2f74 SPAN> = SRMx;</t\n- 0x004062b8 743e3c2f 74643e3c 74643e53 74726f6e t></td><td>Stron\n- 0x004062c8 67205265 70656174 204d6172 6b657220 g Repeat Marker \n- 0x004062d8 42617365 20736574 20627920 4d495241 Base set by MIRA\n- 0x004062e8 3c2f7464 3e3c2f74 723e0a00 3c747220 </td></tr>..<tr \n- 0x004062f8 616c6967 6e3d226c 65667422 3e3c7464 align=\"left\"><td\n- 0x00406308 3e3c7474 3e3c5350 414e2043 4c415353 ><tt><SPAN CLASS\n- 0x00406318 3d225752 4d72223e 266e6273 703b3c2f =\"WRMr\"> </\n- 0x00406328 5350414e 3e203d20 57524d78 3b3c2f74 SPAN> = WRMx;</t\n- 0x00406338 743e3c2f 74643e3c 74643e57 65616b20 t></td><td>Weak \n- 0x00406348 52657065 6174204d 61726b65 72204261 Repeat Marker Ba\n- 0x00406358 73652073 65742062 79204d49 52413c2f se set by MIRA</\n- 0x00406368 74643e3c 2f74723e 0a000000 3c747220 td></tr>....<tr \n- 0x00406378 616c6967 6e3d226c 65667422 3e3c7464 align=\"left\"><td\n- 0x00406388 3e3c7474 3e3c5350 414e2043 4c415353 ><tt><SPAN CLASS\n- 0x00406398 3d225352 4f72223e 266e6273 703b3c2f =\"SROr\"> </\n- 0x004063a8 5350414e 3e203d20 53524f78 3b3c2f74 SPAN> = SROx;</t\n- 0x004063b8 743e3c2f 74643e3c 74643e53 4e502069 t></td><td>SNP i\n- 0x004063c8 6e746552 204f7267 616e6973 6d202852 nteR Organism (R\n- 0x004063d8 6561642f 436f6e73 656e7375 73292073 ead/Consensus) s\n- 0x004063e8 65742062 79204d49 52413c2f 74643e3c et by MIRA</td><\n- 0x004063f8 2f74723e 0a000000 3c747220 616c6967 /tr>....<tr alig\n- 0x00406408 6e3d226c 65667422 3e3c7464 3e3c7474 n=\"left\"><td><tt\n- 0x00406418 3e3c5350 414e2043 4c415353 3d225341 ><SPAN CLASS=\"SA\n- 0x00406428 4f72223e 266e6273 703b3c2f 5350414e Or\"> </SPAN\n- 0x00406438 3e203d20 53414f78 3b3c2f74 743e3c2f > = SAOx;</tt></\n- 0x00406448 74643e3c 74643e53 4e502069 6e747241 td><td>SNP intrA\n- 0x00406458 204f7267 616e6973 6d202852 6561642f Organism (Read/\n- 0x00406468 436f6e73 656e7375 73292073 65742062 Consensus) set b\n- 0x00406478 79204d49 52413c2f 74643e3c 2f74723e y MIRA</td></tr>\n- 0x00406488 0a000000 3c747220 616c6967 6e3d226c ....<tr align=\"l\n- 0x00406498 65667422 3e3c7464 3e3c7474 3e3c5350 eft\"><td><tt><SP\n- 0x004064a8 414e2043 4c415353 3d225349 4f72223e AN CLASS=\"SIOr\">\n- 0x004064b8 266e6273 703b3c2f 5350414e 3e203d20  </SPAN> = \n- 0x004064c8 53494f78 3b3c2f74 743e3c2f 74643e3c SIOx;</tt></td><\n- 0x004064d8 74643e53 4e502049 6e746572 2d20616e td>SNP Inter- an\n- 0x004064e8 6420696e 7472612d 4f726761 6e69736d d intra-Organism\n- 0x004064f8 20285265 61642f43 6f6e7365 6e737573 (Read/Consensus\n- 0x00406508 29207365 74206279 204d4952 413c2f74 ) set by MIRA</t\n- 0x00406518 643e3c2f 74723e0a 00000000 3c747220 d></tr>.....<tr \n- 0x00406528 616c6967 6e3d226c 65667422 3e3c7464 align=\"left\"><td\n- 0x00406538 3e3c7474 3e3c5350 414e2043 4c415353 ><tt><SPAN CLASS\n- 0x00406548 3d224d43 5663223e 266e6273 703b3c2f =\"MCVc\"> </\n- 0x00406558 5350414e 3e203d20 4d435663 3b3c2f74 SPAN> = MCVc;</t\n- 0x00406568 743e3c2f 74643e3c 74643e4d 69737369 t></td><td>Missi\n- 0x00406578 6e672043 6f566572 61676520 696e2043 ng CoVerage in C\n- 0x00406588 6f6e7365 6e737573 20287365 74206279 onsensus (set by\n- 0x00406598 204d4952 41293c2f 74643e3c 2f74723e MIRA)</td></tr>\n- 0x004065a8 0a000000 3c747220 616c6967 6e3d226c ....<tr align=\"l\n- 0x004065b8 65667422 3e3c7464 3e3c7474 3e3c5350 eft\"><td><tt><SP\n- 0x004065c8 414e2043 4c415353 3d22504f 4c59223e AN CLASS=\"POLY\">\n- 0x004065d8 266e6273 703b3c2f 5350414e 3e203d20  </SPAN> = \n- 0x004065e8 504f4c59 3b3c2f74 743e3c2f 74643e3c POLY;</tt></td><\n- 0x004065f8 74643e50 6f6c792d 41207369 676e616c td>Poly-A signal\n- 0x00406608 3c2f7464 3e3c2f74 723e0a00 3c747220 </td></tr>..<tr \n- 0x00406618 616c6967 6e3d226c 65667422 3e3c7464 align=\"left\"><td\n- 0x00406628 3e3c7474 3e3c5350 414e2043 4c415353 ><tt><SPAN CLASS\n- 0x00406638 3d224544 7844223e 266e6273 703b3c2f =\"EDxD\"> </\n- 0x00406648 5350414e 3e203d20 45447844 3b3c2f74 SPAN> = EDxD;</t\n- 0x00406658 743e3c2f 74643e3c 74643e44 656c6574 t></td><td>Delet\n- 0x00406668 65206f70 65726174 696f6e20 73657420 e operation set \n- 0x00406678 62792045 6449743c 2f74643e 3c2f7472 by EdIt</td></tr\n- 0x00406688 3e0a0000 3c747220 616c6967 6e3d226c >...<tr align=\"l\n- 0x00406698 65667422 3e3c7464 3e3c7474 3e3c5350 eft\"><td><tt><SP\n- 0x004066a8 414e2043 4c415353 3d224544 7849223e AN CLASS=\"EDxI\">\n- 0x004066b8 266e6273 703b3c2f 5350414e 3e203d20  </SPAN> = \n- 0x004066c8 45447849 3b3c2f74 743e3c2f 74643e3c EDxI;</tt></td><\n- 0x004066d8 74643e49 6e736572 74206f70 65726174 td>Insert operat\n- 0x004066e8 696f6e20 73657420 62792045 6449743c ion set by EdIt<\n- 0x004066f8 2f74643e 3c2f7472 3e0a0000 3c747220 /td></tr>...<tr \n- 0x00406708 616c6967 6e3d226c 65667422 3e3c7464 align=\"left\"><td\n- 0x00406718 3e3c7474 3e3c5350 414e2043 4c415353 ><tt><SPAN CLASS\n- 0x00406728 3d224544 7843223e 266e6273 703b3c2f =\"EDxC\"> </\n- 0x00406738 5350414e 3e203d20 45447843 3b3c2f74 SPAN> = EDxC;</t\n- 0x00406748 743e3c2f 74643e3c 74643e43 68616e67 t></td><td>Chang\n- 0x00406758 65206f70 65726174 696f6e20 73657420 e operation set \n- 0x00406768 62792045 6449743c 2f74643e 3c2f7472 by EdIt</td></tr\n- 0x00406778 3e0a0000 3c747220 616c6967 6e3d226c >...<tr align=\"l\n- 0x00406788 65667422 3e3c7464 3e3c7474 3e3c5350 eft\"><td><tt><SP\n- 0x00406798 414e2043 4c415353 3d224955 5043223e AN CLASS=\"IUPC\">\n- 0x004067a8 266e6273 703b3c2f 5350414e 3e203d20  </SPAN> = \n- 0x004067b8 49555041 433b3c2f 74743e3c 2f74643e IUPAC;</tt></td>\n- 0x004067c8 3c74643e 20495550 41432062 61736520 <td> IUPAC base \n- 0x004067d8 2873686f 7773206f 6e6c7920 696e2048 (shows only in H\n- 0x004067e8 544d4c20 6f757470 7574293c 2f74643e TML output)</td>\n- 0x004067f8 3c2f7472 3e0a0000 3c2f7461 626c653e </tr>...</table>\n- 0x00406808 3c2f6365 6e746572 3e0a0000 20202020 </center>... \n- 0x00406818 20202020 20202020 20202020 20202020 \n+ 0x00401928 3d3d3d3d 3d3d3d3d 3d3d3d0a 0a000000 ===========.....\n+ 0x00401938 52472000 09617667 20746f74 616c206c RG ..avg total l\n+ 0x00401948 656e3a20 00000000 09617667 20636c69 en: .....avg cli\n+ 0x00401958 70206c65 6e3a2000 09746f74 616c2062 p len: ..total b\n+ 0x00401968 61736573 3a200000 09757365 64206261 ases: ...used ba\n+ 0x00401978 7365733a 20000000 6d616e69 66657374 ses: ...manifest\n+ 0x00401988 20656e74 72792073 61797320 746f206c entry says to l\n+ 0x00401998 6f616420 61732062 61636b62 6f6e652c oad as backbone,\n+ 0x004019a8 20627574 20726561 6467726f 75702069 but readgroup i\n+ 0x004019b8 73206e6f 74206261 636b626f 6e653f00 s not backbone?.\n+ 0x004019c8 766f6964 20417373 656d626c 793a3a73 void Assembly::s\n+ 0x004019d8 74726561 6d536571 75656e63 65446174 treamSequenceDat\n+ 0x004019e8 6146726f 6d4d616e 69666573 74287374 aFromManifest(st\n+ 0x004019f8 643a3a76 6563746f 723c4d49 52415061 d::vector<MIRAPa\n+ 0x00401a08 72616d65 74657273 3e202620 6d697261 rameters> & mira\n+ 0x00401a18 70617261 6d732c20 4d616e69 66657374 params, Manifest\n+ 0x00401a28 2026206d 616e2c20 52656164 506f6f6c & man, ReadPool\n+ 0x00401a38 20262072 65616470 6f6f6c2c 20737464 & readpool, std\n+ 0x00401a48 3a3a6c69 73743c43 6f6e7469 673e202a ::list<Contig> *\n+ 0x00401a58 20636f6e 74696773 7074722c 20737464 contigsptr, std\n+ 0x00401a68 3a3a7665 63746f72 3c726561 6469645f ::vector<readid_\n+ 0x00401a78 743e202a 20726561 64736173 6261636b t> * readsasback\n+ 0x00401a88 626f6e65 636f6e74 69677329 00000000 bonecontigs)....\n+ 0x00401a98 4c6f6164 696e6720 72656164 73206f72 Loading reads or\n+ 0x00401aa8 20617373 656d626c 65642063 6f6e7469 assembled conti\n+ 0x00401ab8 67732000 61732072 65666572 656e6365 gs .as reference\n+ 0x00401ac8 20626163 6b626f6e 65200000 20747970 backbone .. typ\n+ 0x00401ad8 65200000 4c6f6164 696e6720 72656665 e ..Loading refe\n+ 0x00401ae8 72656e63 65206261 636b626f 6e652066 rence backbone f\n+ 0x00401af8 726f6d20 00000000 4c6f6164 696e6720 rom ....Loading \n+ 0x00401b08 72656164 73206672 6f6d2000 636f6e74 reads from .cont\n+ 0x00401b18 61696e65 64200000 20636f6e 74696773 ained .. contigs\n+ 0x00401b28 2e204f6e 6c792074 68652063 6f6e7469 . Only the conti\n+ 0x00401b38 67732077 696c6c20 62652061 64646564 gs will be added\n+ 0x00401b48 20617320 6261636b 626f6e65 2e0a0000 as backbone....\n+ 0x00401b58 4265666f 72652073 6f727469 6e673a20 Before sorting: \n+ 0x00401b68 74656d70 6c617465 20706172 746e6572 template partner\n+ 0x00401b78 73206861 76652074 656d706c 61746520 s have template \n+ 0x00401b88 6d69736d 61746368 21000000 536f7274 mismatch!...Sort\n+ 0x00401b98 696e6720 72656164 73202e2e 2e200000 ing reads ... ..\n+ 0x00401ba8 41535f64 65627269 73726561 736f6e2e AS_debrisreason.\n+ 0x00401bb8 73697a65 28292021 3d206475 6d6d792e size() != dummy.\n+ 0x00401bc8 73697a65 28290000 766f6964 20417373 size()..void Ass\n+ 0x00401bd8 656d626c 793a3a73 6f727452 65616450 embly::sortReadP\n+ 0x00401be8 6f6f6c28 29000000 41667465 7220736f ool()...After so\n+ 0x00401bf8 7274696e 673a2074 656d706c 61746520 rting: template \n+ 0x00401c08 70617274 6e657273 20686176 65207465 partners have te\n+ 0x00401c18 6d706c61 7465206d 69736d61 74636821 mplate mismatch!\n+ 0x00401c28 00000000 53617669 6e672072 65616467 ....Saving readg\n+ 0x00401c38 726f7570 20696e66 6f20746f 2066696c roup info to fil\n+ 0x00401c48 653a2000 52656164 67726f75 70200000 e: .Readgroup ..\n+ 0x00401c58 2028756e 6e616d65 64290a00 54656368 (unnamed)..Tech\n+ 0x00401c68 6e6f6c6f 67793a20 00000000 4e756d2e nology: ....Num.\n+ 0x00401c78 20726561 64733a20 00000000 20207468 reads: .... th\n+ 0x00401c88 6572656f 66206368 696d6572 613a2000 ereof chimera: .\n+ 0x00401c98 6d617962 65206e6f 74207365 61726368 maybe not search\n+ 0x00401ca8 65642066 6f723f00 252c2000 0a4c6962 ed for?.%, ..Lib\n+ 0x00401cb8 72617279 20747970 653a2000 70616972 rary type: .pair\n+ 0x00401cc8 65642000 0a202020 206d6561 6e3a2000 ed .. mean: .\n+ 0x00401cd8 20737464 65763a20 00000000 20736b65 stdev: .... ske\n+ 0x00401ce8 776e6573 733a2000 0a202020 206d696e wness: .. min\n+ 0x00401cf8 3a200000 096d6178 3a200000 73686f74 : ...max: ..shot\n+ 0x00401d08 67756e0a 00000000 44656c65 74696e67 gun.....Deleting\n+ 0x00401d18 20676170 20636f6c 756d6e73 20696e20 gap columns in \n+ 0x00401d28 6261636b 626f6e65 73202e2e 2e200000 backbones ... ..\n+ 0x00401d38 506f7374 70726f63 65737369 6e672062 Postprocessing b\n+ 0x00401d48 61636b62 6f6e6528 7329202e 2e2e2074 ackbone(s) ... t\n+ 0x00401d58 68697320 6d617920 74616b65 20612077 his may take a w\n+ 0x00401d68 68696c65 2e000000 5e436f6e 7469675b hile....^Contig[\n+ 0x00401d78 302d395d 2b240000 20746f20 70726f63 0-9]+$.. to proc\n+ 0x00401d88 6573730a 00000000 42616420 6e616d65 ess.....Bad name\n+ 0x00401d98 20666f72 20626163 6b626f6e 65207365 for backbone se\n+ 0x00401da8 7175656e 63652000 4261636b 626f6e65 quence .Backbone\n+ 0x00401db8 20736571 75656e63 6573206d 6179204e sequences may N\n+ 0x00401dc8 4f542062 65206e61 6d652027 436f6e74 OT be name 'Cont\n+ 0x00401dd8 69675827 20776974 68202758 27206265 igX' with 'X' be\n+ 0x00401de8 696e6720 616e7920 6e756d62 65722e0a ing any number..\n+ 0x00401df8 00000000 54686572 65277320 61206261 ....There's a ba\n+ 0x00401e08 636b626f 6e652073 65717565 6e636520 ckbone sequence \n+ 0x00401e18 286e756d 62657220 00000000 29207769 (number ....) wi\n+ 0x00401e28 74686f75 74206120 6e616d65 3f20546f thout a name? To\n+ 0x00401e38 6f206261 642c206e 6f742061 6c6c6f77 o bad, not allow\n+ 0x00401e48 65642e0a 00000000 5f626200 536f6d65 ed......_bb.Some\n+ 0x00401e58 20626163 6b626f6e 65732068 61642065 backbones had e\n+ 0x00401e68 69746865 72206e6f 206e616d 6573206f ither no names o\n+ 0x00401e78 72206120 62616420 6e616d65 20287365 r a bad name (se\n+ 0x00401e88 65206c6f 67206162 6f766529 2e205374 e log above). St\n+ 0x00401e98 6f707069 6e672068 6572652c 20666978 opping here, fix\n+ 0x00401ea8 20796f75 72207365 7175656e 6365206e your sequence n\n+ 0x00401eb8 616d6573 2e0a0000 766f6964 20417373 ames....void Ass\n+ 0x00401ec8 656d626c 793a3a70 6f73744c 6f616442 embly::postLoadB\n+ 0x00401ed8 61636b62 6f6e6528 29000000 54686520 ackbone()...The \n+ 0x00401ee8 226a6f62 3d2e2e2e 22206465 66696e69 \"job=...\" defini\n+ 0x00401ef8 74696f6e 206f6620 74686520 6d616e69 tion of the mani\n+ 0x00401f08 66657374 20736179 7320796f 75207761 fest says you wa\n+ 0x00401f18 6e742061 206d6170 70696e67 20617373 nt a mapping ass\n+ 0x00401f28 656d626c 792c2062 7574206e 6f206261 embly, but no ba\n+ 0x00401f38 636b626f 6e652073 65717565 6e636520 ckbone sequence \n+ 0x00401f48 77617320 67697665 6e20696e 20746865 was given in the\n+ 0x00401f58 20726561 6467726f 7570732e 0a0a4469 readgroups...Di\n+ 0x00401f68 6420796f 7520666f 72676574 20616e20 d you forget an \n+ 0x00401f78 2769735f 72656665 72656e63 65272069 'is_reference' i\n+ 0x00401f88 6e206f6e 65206f66 20746865 20726561 n one of the rea\n+ 0x00401f98 6467726f 7570733f 00000000 766f6964 dgroups?....void\n+ 0x00401fa8 20417373 656d626c 793a3a6c 6f616453 Assembly::loadS\n+ 0x00401fb8 65717565 6e636544 61746146 726f6d4d equenceDataFromM\n+ 0x00401fc8 616e6966 65737428 29000000 54686520 anifest()...The \n+ 0x00401fd8 226a6f62 3d2e2e2e 22206465 66696e69 \"job=...\" defini\n+ 0x00401fe8 74696f6e 206f6620 74686520 6d616e69 tion of the mani\n+ 0x00401ff8 66657374 20736179 7320796f 75207761 fest says you wa\n+ 0x00402008 6e742061 2064652d 6e6f766f 20617373 nt a de-novo ass\n+ 0x00402018 656d626c 792c2062 75742074 68657265 embly, but there\n+ 0x00402028 20697320 61206261 636b626f 6e652f72 is a backbone/r\n+ 0x00402038 65666572 656e6365 20736571 75656e63 eference sequenc\n+ 0x00402048 65206769 76656e20 696e2074 68652072 e given in the r\n+ 0x00402058 65616467 726f7570 732e0a0a 54686973 eadgroups...This\n+ 0x00402068 20697320 6120736c 69676874 20636f6e is a slight con\n+ 0x00402078 74726164 69637469 6f6e2c20 6d616b65 tradiction, make\n+ 0x00402088 20757020 796f7572 206d696e 6420706c up your mind pl\n+ 0x00402098 65617365 2e000000 6c6f6164 20616e63 ease....load anc\n+ 0x004020a8 696c6c61 72793a20 00000000 4d657267 illary: ....Merg\n+ 0x004020b8 696e6720 616e6369 6c6c6172 79206461 ing ancillary da\n+ 0x004020c8 74612000 786d6c00 73736168 61320000 ta .xml.ssaha2..\n+ 0x004020d8 736d616c 74000000 556e6b6e 6f776e20 smalt...Unknown \n+ 0x004020e8 616e6369 6c6c6172 79206669 6c652074 ancillary file t\n+ 0x004020f8 79706520 27000000 2720666f 72206461 ype '...' for da\n+ 0x00402108 74612027 00000000 270a0000 72656164 ta '....'...read\n+ 0x00402118 67726f75 70207769 74682069 6d706f73 group with impos\n+ 0x00402128 7369626c 65207365 7175656e 63696e67 sible sequencing\n+ 0x00402138 20747970 6520666f 756e643a 2073743d type found: st=\n+ 0x00402148 00000000 20666f72 20726561 6467726f .... for readgro\n+ 0x00402158 75700a00 4e6f7465 3a200000 20726561 up..Note: .. rea\n+ 0x00402168 64732077 69746820 34353420 64617461 ds with 454 data\n+ 0x00402178 20686164 20717561 6c697479 20636c69 had quality cli\n+ 0x00402188 70732067 6976656e 2c206275 74206e6f ps given, but no\n+ 0x00402198 20736571 75656e63 696e6720 76656374 sequencing vect\n+ 0x004021a8 6f722063 6c69702e 0a000000 466f7220 or clip.....For \n+ 0x004021b8 4d495241 20746f20 72756e20 70726f70 MIRA to run prop\n+ 0x004021c8 65726c79 20776974 68207265 61642065 erly with read e\n+ 0x004021d8 7874656e 73696f6e 2c207468 6f736520 xtension, those \n+ 0x004021e8 7175616c 69747920 636c6970 73206861 quality clips ha\n+ 0x004021f8 76652062 65656e0a 00000000 6368616e ve been.....chan\n+ 0x00402208 67656420 746f2073 65717565 6e63696e ged to sequencin\n+ 0x00402218 67207665 63746f72 20636c69 70732e0a g vector clips..\n+ 0x00402228 0a000000 48617665 20726561 6420706f ....Have read po\n+ 0x00402238 6f6c2077 69746820 00000000 52657375 ol with ....Resu\n+ 0x00402248 6d652069 73206375 7272656e 746c7920 me is currently \n+ 0x00402258 706f7373 69626c65 206f6e6c 7920666f possible only fo\n+ 0x00402268 72206465 2d6e6f76 6f206173 73656d62 r de-novo assemb\n+ 0x00402278 6c696573 2c20736f 7272792e 00000000 lies, sorry.....\n+ 0x00402288 766f6964 20417373 656d626c 793a3a6c void Assembly::l\n+ 0x00402298 6f616453 65717565 6e636544 61746128 oadSequenceData(\n+ 0x004022a8 29000000 524c4520 72656164 73202e2e )...RLE reads ..\n+ 0x004022b8 2e200000 54616767 696e6720 72656164 . ..Tagging read\n+ 0x004022c8 73206279 20524c45 202e2e2e 20000000 s by RLE ... ...\n+ 0x004022d8 74797065 6e616d65 20626f6f 73743a3a typename boost::\n+ 0x004022e8 64657461 696c3a3a 73705f6d 656d6265 detail::sp_membe\n+ 0x004022f8 725f6163 63657373 3c543e3a 3a747970 r_access<T>::typ\n+ 0x00402308 6520626f 6f73743a 3a736861 7265645f e boost::shared_\n+ 0x00402318 7074723c 543e3a3a 6f706572 61746f72 ptr<T>::operator\n+ 0x00402328 2d3e2829 20636f6e 7374205b 77697468 ->() const [with\n+ 0x00402338 2054203d 20636f6e 73742062 6f6f7374 T = const boost\n+ 0x00402348 3a3a7265 5f646574 61696c5f 31303734 ::re_detail_1074\n+ 0x00402358 30303a3a 6370705f 72656765 785f7472 00::cpp_regex_tr\n+ 0x00402368 61697473 5f696d70 6c656d65 6e746174 aits_implementat\n+ 0x00402378 696f6e3c 63686172 3e3b2074 7970656e ion<char>; typen\n+ 0x00402388 616d6520 626f6f73 743a3a64 65746169 ame boost::detai\n+ 0x00402398 6c3a3a73 705f6d65 6d626572 5f616363 l::sp_member_acc\n+ 0x004023a8 6573733c 543e3a3a 74797065 203d2063 ess<T>::type = c\n+ 0x004023b8 6f6e7374 20626f6f 73743a3a 72655f64 onst boost::re_d\n+ 0x004023c8 65746169 6c5f3130 37343030 3a3a6370 etail_107400::cp\n+ 0x004023d8 705f7265 6765785f 74726169 74735f69 p_regex_traits_i\n+ 0x004023e8 6d706c65 6d656e74 6174696f 6e3c6368 mplementation<ch\n+ 0x004023f8 61723e2a 5d000000 2f757372 2f696e63 ar>*].../usr/inc\n+ 0x00402408 6c756465 2f626f6f 73742f73 6d617274 lude/boost/smart\n+ 0x00402418 5f707472 2f736861 7265645f 7074722e _ptr/shared_ptr.\n+ 0x00402428 68707000 70782021 3d203000 766f6964 hpp.px != 0.void\n+ 0x00402438 20626f6f 73743a3a 6d617463 685f7265 boost::match_re\n+ 0x00402448 73756c74 733c4269 64694974 65726174 sults<BidiIterat\n+ 0x00402458 6f722c20 416c6c6f 6361746f 723e3a3a or, Allocator>::\n+ 0x00402468 7365745f 66697273 74284269 64694974 set_first(BidiIt\n+ 0x00402478 65726174 6f722c20 626f6f73 743a3a6d erator, boost::m\n+ 0x00402488 61746368 5f726573 756c7473 3c426964 atch_results<Bid\n+ 0x00402498 69497465 7261746f 722c2041 6c6c6f63 iIterator, Alloc\n+ 0x004024a8 61746f72 3e3a3a73 697a655f 74797065 ator>::size_type\n+ 0x004024b8 2c20626f 6f6c2920 5b776974 68204269 , bool) [with Bi\n+ 0x004024c8 64694974 65726174 6f72203d 205f5f67 diIterator = __g\n+ 0x004024d8 6e755f63 78783a3a 5f5f6e6f 726d616c nu_cxx::__normal\n+ 0x004024e8 5f697465 7261746f 723c636f 6e737420 _iterator<const \n+ 0x004024f8 63686172 2a2c2073 74643a3a 5f5f6378 char*, std::__cx\n+ 0x00402508 7831313a 3a626173 69635f73 7472696e x11::basic_strin\n+ 0x00402518 673c6368 61723e20 3e3b2041 6c6c6f63 g<char> >; Alloc\n+ 0x00402528 61746f72 203d2073 74643a3a 616c6c6f ator = std::allo\n+ 0x00402538 6361746f 723c626f 6f73743a 3a737562 cator<boost::sub\n+ 0x00402548 5f6d6174 63683c5f 5f676e75 5f637878 _match<__gnu_cxx\n+ 0x00402558 3a3a5f5f 6e6f726d 616c5f69 74657261 ::__normal_itera\n+ 0x00402568 746f723c 636f6e73 74206368 61722a2c tor<const char*,\n+ 0x00402578 20737464 3a3a5f5f 63787831 313a3a62 std::__cxx11::b\n+ 0x00402588 61736963 5f737472 696e673c 63686172 asic_string<char\n+ 0x00402598 3e203e20 3e203e3b 20626f6f 73743a3a > > > >; boost::\n+ 0x004025a8 6d617463 685f7265 73756c74 733c4269 match_results<Bi\n+ 0x004025b8 64694974 65726174 6f722c20 416c6c6f diIterator, Allo\n+ 0x004025c8 6361746f 723e3a3a 73697a65 5f747970 cator>::size_typ\n+ 0x004025d8 65203d20 756e7369 676e6564 20696e74 e = unsigned int\n+ 0x004025e8 5d000000 2f757372 2f696e63 6c756465 ].../usr/include\n+ 0x004025f8 2f626f6f 73742f72 65676578 2f76342f /boost/regex/v4/\n+ 0x00402608 6d617463 685f7265 73756c74 732e6870 match_results.hp\n+ 0x00402618 70000000 706f732b 32203c20 6d5f7375 p...pos+2 < m_su\n+ 0x00402628 62732e73 697a6528 29000000 626f6f6c bs.size()...bool\n+ 0x00402638 20626f6f 73743a3a 72655f64 65746169 boost::re_detai\n+ 0x00402648 6c5f3130 37343030 3a3a7065 726c5f6d l_107400::perl_m\n+ 0x00402658 61746368 65723c42 69646949 74657261 atcher<BidiItera\n+ 0x00402668 746f722c 20416c6c 6f636174 6f722c20 tor, Allocator, \n+ 0x00402678 74726169 74733e3a 3a756e77 696e645f traits>::unwind_\n+ 0x00402688 736c6f77 5f646f74 5f726570 65617428 slow_dot_repeat(\n+ 0x00402698 626f6f6c 29205b77 69746820 42696469 bool) [with Bidi\n+ 0x004026a8 49746572 61746f72 203d205f 5f676e75 Iterator = __gnu\n+ 0x004026b8 5f637878 3a3a5f5f 6e6f726d 616c5f69 _cxx::__normal_i\n+ 0x004026c8 74657261 746f723c 636f6e73 74206368 terator<const ch\n+ 0x004026d8 61722a2c 20737464 3a3a5f5f 63787831 ar*, std::__cxx1\n+ 0x004026e8 313a3a62 61736963 5f737472 696e673c 1::basic_string<\n+ 0x004026f8 63686172 3e203e3b 20416c6c 6f636174 char> >; Allocat\n+ 0x00402708 6f72203d 20737464 3a3a616c 6c6f6361 or = std::alloca\n+ 0x00402718 746f723c 626f6f73 743a3a73 75625f6d tor<boost::sub_m\n+ 0x00402728 61746368 3c5f5f67 6e755f63 78783a3a atch<__gnu_cxx::\n+ 0x00402738 5f5f6e6f 726d616c 5f697465 7261746f __normal_iterato\n+ 0x00402748 723c636f 6e737420 63686172 2a2c2073 r<const char*, s\n+ 0x00402758 74643a3a 5f5f6378 7831313a 3a626173 td::__cxx11::bas\n+ 0x00402768 69635f73 7472696e 673c6368 61723e20 ic_string<char> \n+ 0x00402778 3e203e20 3e3b2074 72616974 73203d20 > > >; traits = \n+ 0x00402788 626f6f73 743a3a72 65676578 5f747261 boost::regex_tra\n+ 0x00402798 6974733c 63686172 3e5d0000 7265702d its<char>]..rep-\n+ 0x004027a8 3e747970 65203d3d 2073796e 7461785f >type == syntax_\n+ 0x004027b8 656c656d 656e745f 646f745f 72657000 element_dot_rep.\n+ 0x004027c8 7265702d 3e6e6578 742e702d 3e747970 rep->next.p->typ\n+ 0x004027d8 65203d3d 2073796e 7461785f 656c656d e == syntax_elem\n+ 0x004027e8 656e745f 77696c64 00000000 626f6f6c ent_wild....bool\n+ 0x004027f8 20626f6f 73743a3a 72655f64 65746169 boost::re_detai\n+ 0x00402808 6c5f3130 37343030 3a3a7065 726c5f6d l_107400::perl_m\n+ 0x00402818 61746368 65723c42 69646949 74657261 atcher<BidiItera\n+ 0x00402828 746f722c 20416c6c 6f636174 6f722c20 tor, Allocator, \n+ 0x00402838 74726169 74733e3a 3a756e77 696e645f traits>::unwind_\n+ 0x00402848 63686172 5f726570 65617428 626f6f6c char_repeat(bool\n+ 0x00402858 29205b77 69746820 42696469 49746572 ) [with BidiIter\n+ 0x00402868 61746f72 203d205f 5f676e75 5f637878 ator = __gnu_cxx\n+ 0x00402878 3a3a5f5f 6e6f726d 616c5f69 74657261 ::__normal_itera\n+ 0x00402888 746f723c 636f6e73 74206368 61722a2c tor<const char*,\n+ 0x00402898 20737464 3a3a5f5f 63787831 313a3a62 std::__cxx11::b\n+ 0x004028a8 61736963 5f737472 696e673c 63686172 asic_string<char\n+ 0x004028b8 3e203e3b 20416c6c 6f636174 6f72203d > >; Allocator =\n+ 0x004028c8 20737464 3a3a616c 6c6f6361 746f723c std::allocator<\n+ 0x004028d8 626f6f73 743a3a73 75625f6d 61746368 boost::sub_match\n+ 0x004028e8 3c5f5f67 6e755f63 78783a3a 5f5f6e6f <__gnu_cxx::__no\n+ 0x004028f8 726d616c 5f697465 7261746f 723c636f rmal_iterator<co\n+ 0x00402908 6e737420 63686172 2a2c2073 74643a3a nst char*, std::\n+ 0x00402918 5f5f6378 7831313a 3a626173 69635f73 __cxx11::basic_s\n+ 0x00402928 7472696e 673c6368 61723e20 3e203e20 tring<char> > > \n+ 0x00402938 3e3b2074 72616974 73203d20 626f6f73 >; traits = boos\n+ 0x00402948 743a3a72 65676578 5f747261 6974733c t::regex_traits<\n+ 0x00402958 63686172 3e5d0000 7265702d 3e747970 char>]..rep->typ\n+ 0x00402968 65203d3d 2073796e 7461785f 656c656d e == syntax_elem\n+ 0x00402978 656e745f 63686172 5f726570 00000000 ent_char_rep....\n+ 0x00402988 7265702d 3e6e6578 742e702d 3e747970 rep->next.p->typ\n+ 0x00402998 65203d3d 2073796e 7461785f 656c656d e == syntax_elem\n+ 0x004029a8 656e745f 6c697465 72616c00 626f6f6c ent_literal.bool\n+ 0x004029b8 20626f6f 73743a3a 72655f64 65746169 boost::re_detai\n+ 0x004029c8 6c5f3130 37343030 3a3a7065 726c5f6d l_107400::perl_m\n+ 0x004029d8 61746368 65723c42 69646949 74657261 atcher<BidiItera\n+ 0x004029e8 746f722c 20416c6c 6f636174 6f722c20 tor, Allocator, \n+ 0x004029f8 74726169 74733e3a 3a756e77 696e645f traits>::unwind_\n+ 0x00402a08 73686f72 745f7365 745f7265 70656174 short_set_repeat\n+ 0x00402a18 28626f6f 6c29205b 77697468 20426964 (bool) [with Bid\n+ 0x00402a28 69497465 7261746f 72203d20 5f5f676e iIterator = __gn\n+ 0x00402a38 755f6378 783a3a5f 5f6e6f72 6d616c5f u_cxx::__normal_\n+ 0x00402a48 69746572 61746f72 3c636f6e 73742063 iterator<const c\n+ 0x00402a58 6861722a 2c207374 643a3a5f 5f637878 har*, std::__cxx\n+ 0x00402a68 31313a3a 62617369 635f7374 72696e67 11::basic_string\n+ 0x00402a78 3c636861 723e203e 3b20416c 6c6f6361 <char> >; Alloca\n+ 0x00402a88 746f7220 3d207374 643a3a61 6c6c6f63 tor = std::alloc\n+ 0x00402a98 61746f72 3c626f6f 73743a3a 7375625f ator<boost::sub_\n+ 0x00402aa8 6d617463 683c5f5f 676e755f 6378783a match<__gnu_cxx:\n+ 0x00402ab8 3a5f5f6e 6f726d61 6c5f6974 65726174 :__normal_iterat\n+ 0x00402ac8 6f723c63 6f6e7374 20636861 722a2c20 or<const char*, \n+ 0x00402ad8 7374643a 3a5f5f63 78783131 3a3a6261 std::__cxx11::ba\n+ 0x00402ae8 7369635f 73747269 6e673c63 6861723e sic_string<char>\n+ 0x00402af8 203e203e 203e3b20 74726169 7473203d > > >; traits =\n+ 0x00402b08 20626f6f 73743a3a 72656765 785f7472 boost::regex_tr\n+ 0x00402b18 61697473 3c636861 723e5d00 7265702d aits<char>].rep-\n+ 0x00402b28 3e747970 65203d3d 2073796e 7461785f >type == syntax_\n+ 0x00402b38 656c656d 656e745f 73686f72 745f7365 element_short_se\n+ 0x00402b48 745f7265 70000000 7265702d 3e6e6578 t_rep...rep->nex\n+ 0x00402b58 742e702d 3e747970 65203d3d 2073796e t.p->type == syn\n+ 0x00402b68 7461785f 656c656d 656e745f 73657400 tax_element_set.\n+ 0x00402b78 74797065 6e616d65 20626f6f 73743a3a typename boost::\n+ 0x00402b88 64657461 696c3a3a 73705f64 65726566 detail::sp_deref\n+ 0x00402b98 6572656e 63653c54 3e3a3a74 79706520 erence<T>::type \n+ 0x00402ba8 626f6f73 743a3a73 68617265 645f7074 boost::shared_pt\n+ 0x00402bb8 723c543e 3a3a6f70 65726174 6f722a28 r<T>::operator*(\n+ 0x00402bc8 2920636f 6e737420 5b776974 68205420 ) const [with T \n+ 0x00402bd8 3d20626f 6f73743a 3a726567 65785f74 = boost::regex_t\n+ 0x00402be8 72616974 735f7772 61707065 723c626f raits_wrapper<bo\n+ 0x00402bf8 6f73743a 3a726567 65785f74 72616974 ost::regex_trait\n+ 0x00402c08 733c6368 61723e20 3e3b2074 7970656e s<char> >; typen\n+ 0x00402c18 616d6520 626f6f73 743a3a64 65746169 ame boost::detai\n+ 0x00402c28 6c3a3a73 705f6465 72656665 72656e63 l::sp_dereferenc\n+ 0x00402c38 653c543e 3a3a7479 7065203d 20626f6f e<T>::type = boo\n+ 0x00402c48 73743a3a 72656765 785f7472 61697473 st::regex_traits\n+ 0x00402c58 5f777261 70706572 3c626f6f 73743a3a _wrapper<boost::\n+ 0x00402c68 72656765 785f7472 61697473 3c636861 regex_traits<cha\n+ 0x00402c78 723e203e 265d0000 636f6e73 7420626f r> >&]..const bo\n+ 0x00402c88 6f73743a 3a72655f 64657461 696c5f31 ost::re_detail_1\n+ 0x00402c98 30373430 303a3a72 65676578 5f646174 07400::regex_dat\n+ 0x00402ca8 613c6368 6172542c 20747261 6974733e a<charT, traits>\n+ 0x00402cb8 2620626f 6f73743a 3a626173 69635f72 & boost::basic_r\n+ 0x00402cc8 65676578 3c636861 72542c20 74726169 egex<charT, trai\n+ 0x00402cd8 74733e3a 3a676574 5f646174 61282920 ts>::get_data() \n+ 0x00402ce8 636f6e73 74205b77 69746820 63686172 const [with char\n+ 0x00402cf8 54203d20 63686172 3b207472 61697473 T = char; traits\n+ 0x00402d08 203d2062 6f6f7374 3a3a7265 6765785f = boost::regex_\n+ 0x00402d18 74726169 74733c63 6861723e 5d000000 traits<char>]...\n+ 0x00402d28 2f757372 2f696e63 6c756465 2f626f6f /usr/include/boo\n+ 0x00402d38 73742f72 65676578 2f76342f 62617369 st/regex/v4/basi\n+ 0x00402d48 635f7265 6765782e 68707000 3020213d c_regex.hpp.0 !=\n+ 0x00402d58 206d5f70 696d706c 2e676574 28290000 m_pimpl.get()..\n+ 0x00402d68 626f6f6c 20626f6f 73743a3a 72655f64 bool boost::re_d\n+ 0x00402d78 65746169 6c5f3130 37343030 3a3a7065 etail_107400::pe\n+ 0x00402d88 726c5f6d 61746368 65723c42 69646949 rl_matcher<BidiI\n+ 0x00402d98 74657261 746f722c 20416c6c 6f636174 terator, Allocat\n+ 0x00402da8 6f722c20 74726169 74733e3a 3a756e77 or, traits>::unw\n+ 0x00402db8 696e645f 6c6f6e67 5f736574 5f726570 ind_long_set_rep\n+ 0x00402dc8 65617428 626f6f6c 29205b77 69746820 eat(bool) [with \n+ 0x00402dd8 42696469 49746572 61746f72 203d205f BidiIterator = _\n+ 0x00402de8 5f676e75 5f637878 3a3a5f5f 6e6f726d _gnu_cxx::__norm\n+ 0x00402df8 616c5f69 74657261 746f723c 636f6e73 al_iterator<cons\n+ 0x00402e08 74206368 61722a2c 20737464 3a3a5f5f t char*, std::__\n+ 0x00402e18 63787831 313a3a62 61736963 5f737472 cxx11::basic_str\n+ 0x00402e28 696e673c 63686172 3e203e3b 20416c6c ing<char> >; All\n+ 0x00402e38 6f636174 6f72203d 20737464 3a3a616c ocator = std::al\n+ 0x00402e48 6c6f6361 746f723c 626f6f73 743a3a73 locator<boost::s\n+ 0x00402e58 75625f6d 61746368 3c5f5f67 6e755f63 ub_match<__gnu_c\n+ 0x00402e68 78783a3a 5f5f6e6f 726d616c 5f697465 xx::__normal_ite\n+ 0x00402e78 7261746f 723c636f 6e737420 63686172 rator<const char\n+ 0x00402e88 2a2c2073 74643a3a 5f5f6378 7831313a *, std::__cxx11:\n+ 0x00402e98 3a626173 69635f73 7472696e 673c6368 :basic_string<ch\n+ 0x00402ea8 61723e20 3e203e20 3e3b2074 72616974 ar> > > >; trait\n+ 0x00402eb8 73203d20 626f6f73 743a3a72 65676578 s = boost::regex\n+ 0x00402ec8 5f747261 6974733c 63686172 3e5d0000 _traits<char>]..\n+ 0x00402ed8 7265702d 3e747970 65203d3d 2073796e rep->type == syn\n+ 0x00402ee8 7461785f 656c656d 656e745f 6c6f6e67 tax_element_long\n+ 0x00402ef8 5f736574 5f726570 00000000 7265702d _set_rep....rep-\n+ 0x00402f08 3e6e6578 742e702d 3e747970 65203d3d >next.p->type ==\n+ 0x00402f18 2073796e 7461785f 656c656d 656e745f syntax_element_\n+ 0x00402f28 6c6f6e67 5f736574 00000000 626f6f6c long_set....bool\n+ 0x00402f38 20626f6f 73743a3a 72655f64 65746169 boost::re_detai\n+ 0x00402f48 6c5f3130 37343030 3a3a7065 726c5f6d l_107400::perl_m\n+ 0x00402f58 61746368 65723c42 69646949 74657261 atcher<BidiItera\n+ 0x00402f68 746f722c 20416c6c 6f636174 6f722c20 tor, Allocator, \n+ 0x00402f78 74726169 74733e3a 3a6d6174 63685f63 traits>::match_c\n+ 0x00402f88 6861725f 72657065 61742829 205b7769 har_repeat() [wi\n+ 0x00402f98 74682042 69646949 74657261 746f7220 th BidiIterator \n+ 0x00402fa8 3d205f5f 676e755f 6378783a 3a5f5f6e = __gnu_cxx::__n\n+ 0x00402fb8 6f726d61 6c5f6974 65726174 6f723c63 ormal_iterator<c\n+ 0x00402fc8 6f6e7374 20636861 722a2c20 7374643a onst char*, std:\n+ 0x00402fd8 3a5f5f63 78783131 3a3a6261 7369635f :__cxx11::basic_\n+ 0x00402fe8 73747269 6e673c63 6861723e 203e3b20 string<char> >; \n+ 0x00402ff8 416c6c6f 6361746f 72203d20 7374643a Allocator = std:\n+ 0x00403008 3a616c6c 6f636174 6f723c62 6f6f7374 :allocator<boost\n+ 0x00403018 3a3a7375 625f6d61 7463683c 5f5f676e ::sub_match<__gn\n+ 0x00403028 755f6378 783a3a5f 5f6e6f72 6d616c5f u_cxx::__normal_\n+ 0x00403038 69746572 61746f72 3c636f6e 73742063 iterator<const c\n+ 0x00403048 6861722a 2c207374 643a3a5f 5f637878 har*, std::__cxx\n+ 0x00403058 31313a3a 62617369 635f7374 72696e67 11::basic_string\n+ 0x00403068 3c636861 723e203e 203e203e 3b207472 <char> > > >; tr\n+ 0x00403078 61697473 203d2062 6f6f7374 3a3a7265 aits = boost::re\n+ 0x00403088 6765785f 74726169 74733c63 6861723e gex_traits<char>\n+ 0x00403098 5d000000 31203d3d 20737461 7469635f ]...1 == static_\n+ 0x004030a8 63617374 3c636f6e 73742072 655f6c69 cast<const re_li\n+ 0x004030b8 74657261 6c2a3e28 7265702d 3e6e6578 teral*>(rep->nex\n+ 0x004030c8 742e7029 2d3e6c65 6e677468 00000000 t.p)->length....\n+ 0x004030d8 766f6964 20626f6f 73743a3a 6d617463 void boost::matc\n+ 0x004030e8 685f7265 73756c74 733c4269 64694974 h_results<BidiIt\n+ 0x004030f8 65726174 6f722c20 416c6c6f 6361746f erator, Allocato\n+ 0x00403108 723e3a3a 7365745f 7365636f 6e642842 r>::set_second(B\n+ 0x00403118 69646949 74657261 746f722c 20626f6f idiIterator, boo\n+ 0x00403128 73743a3a 6d617463 685f7265 73756c74 st::match_result\n+ 0x00403138 733c4269 64694974 65726174 6f722c20 s<BidiIterator, \n+ 0x00403148 416c6c6f 6361746f 723e3a3a 73697a65 Allocator>::size\n+ 0x00403158 5f747970 652c2062 6f6f6c2c 20626f6f _type, bool, boo\n+ 0x00403168 6c29205b 77697468 20426964 69497465 l) [with BidiIte\n+ 0x00403178 7261746f 72203d20 5f5f676e 755f6378 rator = __gnu_cx\n+ 0x00403188 783a3a5f 5f6e6f72 6d616c5f 69746572 x::__normal_iter\n+ 0x00403198 61746f72 3c636f6e 73742063 6861722a ator<const char*\n+ 0x004031a8 2c207374 643a3a5f 5f637878 31313a3a , std::__cxx11::\n+ 0x004031b8 62617369 635f7374 72696e67 3c636861 basic_string<cha\n+ 0x004031c8 723e203e 3b20416c 6c6f6361 746f7220 r> >; Allocator \n+ 0x004031d8 3d207374 643a3a61 6c6c6f63 61746f72 = std::allocator\n+ 0x004031e8 3c626f6f 73743a3a 7375625f 6d617463 <boost::sub_matc\n+ 0x004031f8 683c5f5f 676e755f 6378783a 3a5f5f6e h<__gnu_cxx::__n\n+ 0x00403208 6f726d61 6c5f6974 65726174 6f723c63 ormal_iterator<c\n+ 0x00403218 6f6e7374 20636861 722a2c20 7374643a onst char*, std:\n+ 0x00403228 3a5f5f63 78783131 3a3a6261 7369635f :__cxx11::basic_\n+ 0x00403238 73747269 6e673c63 6861723e 203e203e string<char> > >\n+ 0x00403248 203e3b20 626f6f73 743a3a6d 61746368 >; boost::match\n+ 0x00403258 5f726573 756c7473 3c426964 69497465 _results<BidiIte\n+ 0x00403268 7261746f 722c2041 6c6c6f63 61746f72 rator, Allocator\n+ 0x00403278 3e3a3a73 697a655f 74797065 203d2075 >::size_type = u\n+ 0x00403288 6e736967 6e656420 696e745d 00000000 nsigned int]....\n+ 0x00403298 6d5f7375 62732e73 697a6528 29203e20 m_subs.size() > \n+ 0x004032a8 706f7300 626f6f6c 20626f6f 73743a3a pos.bool boost::\n+ 0x004032b8 72655f64 65746169 6c5f3130 37343030 re_detail_107400\n+ 0x004032c8 3a3a7065 726c5f6d 61746368 65723c42 ::perl_matcher<B\n+ 0x004032d8 69646949 74657261 746f722c 20416c6c idiIterator, All\n+ 0x004032e8 6f636174 6f722c20 74726169 74733e3a ocator, traits>:\n+ 0x004032f8 3a6d6174 63685f72 65637572 73696f6e :match_recursion\n+ 0x00403308 2829205b 77697468 20426964 69497465 () [with BidiIte\n+ 0x00403318 7261746f 72203d20 5f5f676e 755f6378 rator = __gnu_cx\n+ 0x00403328 783a3a5f 5f6e6f72 6d616c5f 69746572 x::__normal_iter\n+ 0x00403338 61746f72 3c636f6e 73742063 6861722a ator<const char*\n+ 0x00403348 2c207374 643a3a5f 5f637878 31313a3a , std::__cxx11::\n+ 0x00403358 62617369 635f7374 72696e67 3c636861 basic_string<cha\n+ 0x00403368 723e203e 3b20416c 6c6f6361 746f7220 r> >; Allocator \n+ 0x00403378 3d207374 643a3a61 6c6c6f63 61746f72 = std::allocator\n+ 0x00403388 3c626f6f 73743a3a 7375625f 6d617463 <boost::sub_matc\n+ 0x00403398 683c5f5f 676e755f 6378783a 3a5f5f6e h<__gnu_cxx::__n\n+ 0x004033a8 6f726d61 6c5f6974 65726174 6f723c63 ormal_iterator<c\n+ 0x004033b8 6f6e7374 20636861 722a2c20 7374643a onst char*, std:\n+ 0x004033c8 3a5f5f63 78783131 3a3a6261 7369635f :__cxx11::basic_\n+ 0x004033d8 73747269 6e673c63 6861723e 203e203e string<char> > >\n+ 0x004033e8 203e3b20 74726169 7473203d 20626f6f >; traits = boo\n+ 0x004033f8 73743a3a 72656765 785f7472 61697473 st::regex_traits\n+ 0x00403408 3c636861 723e5d00 70737461 74652d3e <char>].pstate->\n+ 0x00403418 74797065 203d3d20 73796e74 61785f65 type == syntax_e\n+ 0x00403428 6c656d65 6e745f72 65637572 73650000 lement_recurse..\n+ 0x00403438 41747465 6d707420 746f2061 63636573 Attempt to acces\n+ 0x00403448 7320616e 20756e69 6e697469 616c697a s an uninitializ\n+ 0x00403458 65642062 6f6f7374 3a3a6d61 7463685f ed boost::match_\n+ 0x00403468 72657375 6c74733c 3e20636c 6173732e results<> class.\n+ 0x00403478 00000000 626f6f6c 20626f6f 73743a3a ....bool boost::\n+ 0x00403488 72655f64 65746169 6c5f3130 37343030 re_detail_107400\n+ 0x00403498 3a3a7065 726c5f6d 61746368 65723c42 ::perl_matcher<B\n+ 0x004034a8 69646949 74657261 746f722c 20416c6c idiIterator, All\n+ 0x004034b8 6f636174 6f722c20 74726169 74733e3a ocator, traits>:\n+ 0x004034c8 3a6d6174 63685f62 61636b72 65662829 :match_backref()\n+ 0x004034d8 205b7769 74682042 69646949 74657261 [with BidiItera\n+ 0x004034e8 746f7220 3d205f5f 676e755f 6378783a tor = __gnu_cxx:\n+ 0x004034f8 3a5f5f6e 6f726d61 6c5f6974 65726174 :__normal_iterat\n+ 0x00403508 6f723c63 6f6e7374 20636861 722a2c20 or<const char*, \n+ 0x00403518 7374643a 3a5f5f63 78783131 3a3a6261 std::__cxx11::ba\n+ 0x00403528 7369635f 73747269 6e673c63 6861723e sic_string<char>\n+ 0x00403538 203e3b20 416c6c6f 6361746f 72203d20 >; Allocator = \n+ 0x00403548 7374643a 3a616c6c 6f636174 6f723c62 std::allocator<b\n+ 0x00403558 6f6f7374 3a3a7375 625f6d61 7463683c oost::sub_match<\n+ 0x00403568 5f5f676e 755f6378 783a3a5f 5f6e6f72 __gnu_cxx::__nor\n+ 0x00403578 6d616c5f 69746572 61746f72 3c636f6e mal_iterator<con\n+ 0x00403588 73742063 6861722a 2c207374 643a3a5f st char*, std::_\n+ 0x00403598 5f637878 31313a3a 62617369 635f7374 _cxx11::basic_st\n+ 0x004035a8 72696e67 3c636861 723e203e 203e203e ring<char> > > >\n+ 0x004035b8 3b207472 61697473 203d2062 6f6f7374 ; traits = boost\n+ 0x004035c8 3a3a7265 6765785f 74726169 74733c63 ::regex_traits<c\n+ 0x004035d8 6861723e 5d000000 2f757372 2f696e63 har>].../usr/inc\n+ 0x004035e8 6c756465 2f626f6f 73742f72 65676578 lude/boost/regex\n+ 0x004035f8 2f76342f 7065726c 5f6d6174 63686572 /v4/perl_matcher\n+ 0x00403608 5f636f6d 6d6f6e2e 68707000 722e6669 _common.hpp.r.fi\n+ 0x00403618 72737420 213d2072 2e736563 6f6e6400 rst != r.second.\n+ 0x00403628 626f6f6c 20626f6f 73743a3a 72655f64 bool boost::re_d\n+ 0x00403638 65746169 6c5f3130 37343030 3a3a7065 etail_107400::pe\n+ 0x00403648 726c5f6d 61746368 65723c42 69646949 rl_matcher<BidiI\n+ 0x00403658 74657261 746f722c 20416c6c 6f636174 terator, Allocat\n+ 0x00403668 6f722c20 74726169 74733e3a 3a6d6174 or, traits>::mat\n+ 0x00403678 63685f6d 61746368 2829205b 77697468 ch_match() [with\n+ 0x00403688 20426964 69497465 7261746f 72203d20 BidiIterator = \n+ 0x00403698 5f5f676e 755f6378 783a3a5f 5f6e6f72 __gnu_cxx::__nor\n+ 0x004036a8 6d616c5f 69746572 61746f72 3c636f6e mal_iterator<con\n+ 0x004036b8 73742063 6861722a 2c207374 643a3a5f st char*, std::_\n+ 0x004036c8 5f637878 31313a3a 62617369 635f7374 _cxx11::basic_st\n+ 0x004036d8 72696e67 3c636861 723e203e 3b20416c ring<char> >; Al\n+ 0x004036e8 6c6f6361 746f7220 3d207374 643a3a61 locator = std::a\n+ 0x004036f8 6c6c6f63 61746f72 3c626f6f 73743a3a llocator<boost::\n+ 0x00403708 7375625f 6d617463 683c5f5f 676e755f sub_match<__gnu_\n+ 0x00403718 6378783a 3a5f5f6e 6f726d61 6c5f6974 cxx::__normal_it\n+ 0x00403728 65726174 6f723c63 6f6e7374 20636861 erator<const cha\n+ 0x00403738 722a2c20 7374643a 3a5f5f63 78783131 r*, std::__cxx11\n+ 0x00403748 3a3a6261 7369635f 73747269 6e673c63 ::basic_string<c\n+ 0x00403758 6861723e 203e203e 203e3b20 74726169 har> > > >; trai\n+ 0x00403768 7473203d 20626f6f 73743a3a 72656765 ts = boost::rege\n+ 0x00403778 785f7472 61697473 3c636861 723e5d00 x_traits<char>].\n+ 0x00403788 30203d3d 20726563 75727369 6f6e5f73 0 == recursion_s\n+ 0x00403798 7461636b 2e626163 6b28292e 69647800 tack.back().idx.\n+ 0x004037a8 766f6964 20626f6f 73743a3a 6d617463 void boost::matc\n+ 0x004037b8 685f7265 73756c74 733c4269 64694974 h_results<BidiIt\n+ 0x004037c8 65726174 6f722c20 416c6c6f 6361746f erator, Allocato\n+ 0x004037d8 723e3a3a 7365745f 7365636f 6e642842 r>::set_second(B\n+ 0x004037e8 69646949 74657261 746f7229 205b7769 idiIterator) [wi\n+ 0x004037f8 74682042 69646949 74657261 746f7220 th BidiIterator \n+ 0x00403808 3d205f5f 676e755f 6378783a 3a5f5f6e = __gnu_cxx::__n\n+ 0x00403818 6f726d61 6c5f6974 65726174 6f723c63 ormal_iterator<c\n+ 0x00403828 6f6e7374 20636861 722a2c20 7374643a onst char*, std:\n+ 0x00403838 3a5f5f63 78783131 3a3a6261 7369635f :__cxx11::basic_\n+ 0x00403848 73747269 6e673c63 6861723e 203e3b20 string<char> >; \n+ 0x00403858 416c6c6f 6361746f 72203d20 7374643a Allocator = std:\n+ 0x00403868 3a616c6c 6f636174 6f723c62 6f6f7374 :allocator<boost\n+ 0x00403878 3a3a7375 625f6d61 7463683c 5f5f676e ::sub_match<__gn\n+ 0x00403888 755f6378 783a3a5f 5f6e6f72 6d616c5f u_cxx::__normal_\n+ 0x00403898 69746572 61746f72 3c636f6e 73742063 iterator<const c\n+ 0x004038a8 6861722a 2c207374 643a3a5f 5f637878 har*, std::__cxx\n+ 0x004038b8 31313a3a 62617369 635f7374 72696e67 11::basic_string\n+ 0x004038c8 3c636861 723e203e 203e203e 5d000000 <char> > > >]...\n+ 0x004038d8 6d5f7375 62732e73 697a6528 29203e20 m_subs.size() > \n+ 0x004038e8 32000000 626f6f6c 20626f6f 73743a3a 2...bool boost::\n+ 0x004038f8 72655f64 65746169 6c5f3130 37343030 re_detail_107400\n+ 0x00403908 3a3a7065 726c5f6d 61746368 65723c42 ::perl_matcher<B\n+ 0x00403918 69646949 74657261 746f722c 20416c6c idiIterator, All\n+ 0x00403928 6f636174 6f722c20 74726169 74733e3a ocator, traits>:\n+ 0x00403938 3a6d6174 63685f73 74617274 6d61726b :match_startmark\n+ 0x00403948 2829205b 77697468 20426964 69497465 () [with BidiIte\n+ 0x00403958 7261746f 72203d20 5f5f676e 755f6378 rator = __gnu_cx\n+ 0x00403968 783a3a5f 5f6e6f72 6d616c5f 69746572 x::__normal_iter\n+ 0x00403978 61746f72 3c636f6e 73742063 6861722a ator<const char*\n+ 0x00403988 2c207374 643a3a5f 5f637878 31313a3a , std::__cxx11::\n+ 0x00403998 62617369 635f7374 72696e67 3c636861 basic_string<cha\n+ 0x004039a8 723e203e 3b20416c 6c6f6361 746f7220 r> >; Allocator \n+ 0x004039b8 3d207374 643a3a61 6c6c6f63 61746f72 = std::allocator\n+ 0x004039c8 3c626f6f 73743a3a 7375625f 6d617463 <boost::sub_matc\n+ 0x004039d8 683c5f5f 676e755f 6378783a 3a5f5f6e h<__gnu_cxx::__n\n+ 0x004039e8 6f726d61 6c5f6974 65726174 6f723c63 ormal_iterator<c\n+ 0x004039f8 6f6e7374 20636861 722a2c20 7374643a onst char*, std:\n+ 0x00403a08 3a5f5f63 78783131 3a3a6261 7369635f :__cxx11::basic_\n+ 0x00403a18 73747269 6e673c63 6861723e 203e203e string<char> > >\n+ 0x00403a28 203e3b20 74726169 7473203d 20626f6f >; traits = boo\n+ 0x00403a38 73743a3a 72656765 785f7472 61697473 st::regex_traits\n+ 0x00403a48 3c636861 723e5d00 616c742d 3e747970 <char>].alt->typ\n+ 0x00403a58 65203d3d 2073796e 7461785f 656c656d e == syntax_elem\n+ 0x00403a68 656e745f 616c7400 70737461 74652d3e ent_alt.pstate->\n+ 0x00403a78 74797065 203d3d20 73796e74 61785f65 type == syntax_e\n+ 0x00403a88 6c656d65 6e745f73 74617274 6d61726b lement_startmark\n+ 0x00403a98 00000000 696e6465 78203e20 30000000 ....index > 0...\n+ 0x00403aa8 626f6f73 743a3a72 655f6465 7461696c boost::re_detail\n+ 0x00403ab8 5f313037 3430303a 3a736176 655f7374 _107400::save_st\n+ 0x00403ac8 6174655f 696e6974 3a3a7361 76655f73 ate_init::save_s\n+ 0x00403ad8 74617465 5f696e69 7428626f 6f73743a tate_init(boost:\n+ 0x00403ae8 3a72655f 64657461 696c5f31 30373430 :re_detail_10740\n+ 0x00403af8 303a3a73 61766564 5f737461 74652a2a 0::saved_state**\n+ 0x00403b08 2c20626f 6f73743a 3a72655f 64657461 , boost::re_deta\n+ 0x00403b18 696c5f31 30373430 303a3a73 61766564 il_107400::saved\n+ 0x00403b28 5f737461 74652a2a 29000000 2a656e64 _state**)...*end\n+ 0x00403b38 203e202a 62617365 00000000 636f6e73 > *base....cons\n+ 0x00403b48 7420626f 6f73743a 3a72655f 64657461 t boost::re_deta\n+ 0x00403b58 696c5f31 30373430 303a3a72 655f7379 il_107400::re_sy\n+ 0x00403b68 6e746178 5f626173 652a2062 6f6f7374 ntax_base* boost\n+ 0x00403b78 3a3a6261 7369635f 72656765 783c6368 ::basic_regex<ch\n+ 0x00403b88 6172542c 20747261 6974733e 3a3a6765 arT, traits>::ge\n+ 0x00403b98 745f6669 7273745f 73746174 65282920 t_first_state() \n+ 0x00403ba8 636f6e73 74205b77 69746820 63686172 const [with char\n+ 0x00403bb8 54203d20 63686172 3b207472 61697473 T = char; traits\n+ 0x00403bc8 203d2062 6f6f7374 3a3a7265 6765785f = boost::regex_\n+ 0x00403bd8 74726169 74733c63 6861723e 5d000000 traits<char>]...\n+ 0x00403be8 766f6964 20626f6f 73743a3a 6d617463 void boost::matc\n+ 0x00403bf8 685f7265 73756c74 733c4269 64694974 h_results<BidiIt\n+ 0x00403c08 65726174 6f722c20 416c6c6f 6361746f erator, Allocato\n+ 0x00403c18 723e3a3a 7365745f 66697273 74284269 r>::set_first(Bi\n+ 0x00403c28 64694974 65726174 6f722920 5b776974 diIterator) [wit\n+ 0x00403c38 68204269 64694974 65726174 6f72203d h BidiIterator =\n+ 0x00403c48 205f5f67 6e755f63 78783a3a 5f5f6e6f __gnu_cxx::__no\n+ 0x00403c58 726d616c 5f697465 7261746f 723c636f rmal_iterator<co\n+ 0x00403c68 6e737420 63686172 2a2c2073 74643a3a nst char*, std::\n+ 0x00403c78 5f5f6378 7831313a 3a626173 69635f73 __cxx11::basic_s\n+ 0x00403c88 7472696e 673c6368 61723e20 3e3b2041 tring<char> >; A\n+ 0x00403c98 6c6c6f63 61746f72 203d2073 74643a3a llocator = std::\n+ 0x00403ca8 616c6c6f 6361746f 723c626f 6f73743a allocator<boost:\n+ 0x00403cb8 3a737562 5f6d6174 63683c5f 5f676e75 :sub_match<__gnu\n+ 0x00403cc8 5f637878 3a3a5f5f 6e6f726d 616c5f69 _cxx::__normal_i\n+ 0x00403cd8 74657261 746f723c 636f6e73 74206368 terator<const ch\n+ 0x00403ce8 61722a2c 20737464 3a3a5f5f 63787831 ar*, std::__cxx1\n+ 0x00403cf8 313a3a62 61736963 5f737472 696e673c 1::basic_string<\n+ 0x00403d08 63686172 3e203e20 3e203e5d 00000000 char> > > >]....\n+ 0x00403d18 636f6e73 7420626f 6f73743a 3a726567 const boost::reg\n+ 0x00403d28 65785f74 72616974 735f7772 61707065 ex_traits_wrappe\n+ 0x00403d38 723c7472 61697473 3e262062 6f6f7374 r<traits>& boost\n+ 0x00403d48 3a3a6261 7369635f 72656765 783c6368 ::basic_regex<ch\n+ 0x00403d58 6172542c 20747261 6974733e 3a3a6765 arT, traits>::ge\n+ 0x00403d68 745f7472 61697473 28292063 6f6e7374 t_traits() const\n+ 0x00403d78 205b7769 74682063 68617254 203d2063 [with charT = c\n+ 0x00403d88 6861723b 20747261 69747320 3d20626f har; traits = bo\n+ 0x00403d98 6f73743a 3a726567 65785f74 72616974 ost::regex_trait\n+ 0x00403da8 733c6368 61723e5d 00000000 4e35626f s<char>]....N5bo\n+ 0x00403db8 6f737431 30777261 70657863 65707449 ost10wrapexceptI\n+ 0x00403dc8 53743131 6c6f6769 635f6572 726f7245 St11logic_errorE\n+ 0x00403dd8 45000000 52656d6f 76652073 65493a20 E...Remove seI: \n+ 0x00403de8 00000000 53453a09 00000000 09643120 ....SE:......d1 \n+ 0x00403df8 00000000 09643220 00000000 09737220 .....d2 .....sr \n+ 0x00403e08 00000000 73747265 74636865 733a0a00 ....stretches:..\n+ 0x00403e18 434f4e43 4f565f53 55535049 43494f55 CONCOV_SUSPICIOU\n+ 0x00403e28 535f4449 53545249 42555449 4f4e0000 S_DISTRIBUTION..\n+ 0x00403e38 53757370 6963696f 75732064 69737472 Suspicious distr\n+ 0x00403e48 69627574 696f6e20 6f662063 6f6e7469 ibution of conti\n+ 0x00403e58 6720636f 76657261 67657300 556d6d6d g coverages.Ummm\n+ 0x00403e68 6d202e2e 2e206e6f 20636f6e 73206275 m ... no cons bu\n+ 0x00403e78 696c743f 3f3f0000 766f6964 20417373 ilt???..void Ass\n+ 0x00403e88 656d626c 793a3a70 7269765f 72656d6f embly::priv_remo\n+ 0x00403e98 7665506f 74656e74 69616c6c 7957726f vePotentiallyWro\n+ 0x00403ea8 6e674261 7365496e 73657274 7328436f ngBaseInserts(Co\n+ 0x00403eb8 6e746967 20262063 6f6e2900 0a506572 ntig & con)..Per\n+ 0x00403ec8 666f726d 696e6720 76656374 6f722063 forming vector c\n+ 0x00403ed8 6c697070 696e6720 2e2e2e20 00000000 lipping ... ....\n+ 0x00403ee8 596f7520 61726520 72756e6e 696e6720 You are running \n+ 0x00403ef8 61206765 6e6f6d65 20000000 6d617070 a genome ...mapp\n+ 0x00403f08 696e6700 64652d6e 6f766f00 20617373 ing.de-novo. ass\n+ 0x00403f18 656d626c 7920616e 64207468 65206375 embly and the cu\n+ 0x00403f28 7272656e 74206265 73742065 7374696d rrent best estim\n+ 0x00403f38 6174696f 6e20666f 72206176 65726167 ation for averag\n+ 0x00403f48 6520636f 76657261 67652069 73200000 e coverage is ..\n+ 0x00403f58 7820286e 6f746520 74686174 20746869 x (note that thi\n+ 0x00403f68 73206e75 6d626572 2063616e 20626520 s number can be \n+ 0x00403f78 2b2f2d20 32302520 6f666620 74686520 +/- 20% off the \n+ 0x00403f88 7265616c 2076616c 7565292e 20546869 real value). Thi\n+ 0x00403f98 73206973 20000000 61207072 65747479 s is ...a pretty\n+ 0x00403fa8 20686967 6820636f 76657261 67652c00 high coverage,.\n+ 0x00403fb8 68696768 65722074 68616e20 74686520 higher than the \n+ 0x00403fc8 63757272 656e7420 7761726e 696e6720 current warning \n+ 0x00403fd8 74687265 73686f6c 64206f66 20000000 threshold of ...\n+ 0x00403fe8 782e0a0a 596f7520 73686f75 6c642074 x...You should t\n+ 0x00403ff8 72792074 6f206765 74207468 65206176 ry to get the av\n+ 0x00404008 65726167 6520636f 76657261 6765206e erage coverage n\n+ 0x00404018 6f742068 69676865 72207468 616e2c20 ot higher than, \n+ 0x00404028 7361792c 20363078 20746f20 31303078 say, 60x to 100x\n+ 0x00404038 20666f72 20496c6c 756d696e 61206461 for Illumina da\n+ 0x00404048 7461206f 72203430 7820746f 20363078 ta or 40x to 60x\n+ 0x00404058 20666f72 20343534 20616e64 20496f6e for 454 and Ion\n+ 0x00404068 20546f72 72656e74 20646174 612e2048 Torrent data. H\n+ 0x00404078 79627269 64206173 73656d62 6c696573 ybrid assemblies\n+ 0x00404088 2073686f 756c6420 74617267 65742061 should target a\n+ 0x00404098 20746f74 616c2063 6f766572 61676520 total coverage \n+ 0x004040a8 6f662038 30782074 6f203130 30782061 of 80x to 100x a\n+ 0x004040b8 73207570 70657220 626f756e 642e2046 s upper bound. F\n+ 0x004040c8 6f722074 6861742c 20706c65 61736520 or that, please \n+ 0x004040d8 646f776e 73616d70 6c652079 6f757220 downsample your \n+ 0x004040e8 696e7075 74206461 74612e0a 0a546869 input data...Thi\n+ 0x004040f8 73207761 726e696e 67206861 73207477 s warning has tw\n+ 0x00404108 6f206d61 6a6f7220 72656173 6f6e733a o major reasons:\n+ 0x00404118 0a2d2066 6f72204d 49524120 616e6420 .- for MIRA and \n+ 0x00404128 6f746865 72206f76 65726c61 70206261 other overlap ba\n+ 0x00404138 73656420 61737365 6d626c65 72732c20 sed assemblers, \n+ 0x00404148 74686520 72756e74 696d6520 616e6420 the runtime and \n+ 0x00404158 6d656d6f 72792072 65717569 72656d65 memory requireme\n+ 0x00404168 6e747320 666f7220 756c7472 612d6869 nts for ultra-hi\n+ 0x00404178 67682063 6f766572 61676520 70726f6a gh coverage proj\n+ 0x00404188 65637473 2067726f 77206578 706f6e65 ects grow expone\n+ 0x00404198 6e746961 6c6c792c 20736f20 72656475 ntially, so redu\n+ 0x004041a8 63696e67 20746865 20646174 61206865 cing the data he\n+ 0x004041b8 6c707320 796f7520 74686572 650a2d20 lps you there.- \n+ 0x004041c8 666f7220 616c6c20 61737365 6d626c65 for all assemble\n+ 0x004041d8 72732c20 74686520 636f6e74 69677569 rs, the contigui\n+ 0x004041e8 7479206f 6620616e 20617373 656d626c ty of an assembl\n+ 0x004041f8 79206361 6e20616c 736f2073 75666665 y can also suffe\n+ 0x00404208 72206966 20746865 20636f76 65726167 r if the coverag\n+ 0x00404218 65206973 20746f6f 20686967 682c2069 e is too high, i\n+ 0x00404228 2e652e20 796f7520 67657420 6d6f7265 .e. you get more\n+ 0x00404238 20636f6e 74696773 20746861 6e20796f contigs than yo\n+ 0x00404248 7520776f 756c6420 6f746865 72776973 u would otherwis\n+ 0x00404258 652e2043 61757365 7320666f 72207468 e. Causes for th\n+ 0x00404268 69732065 66666563 74206361 6e206265 is effect can be\n+ 0x00404278 206e6f6e 2d72616e 646f6d20 73657175 non-random sequ\n+ 0x00404288 656e6369 6e672065 72726f72 73206f72 encing errors or\n+ 0x00404298 206c6f77 20667265 7175656e 63792073 low frequency s\n+ 0x004042a8 75622d70 6f70756c 6174696f 6e732077 ub-populations w\n+ 0x004042b8 69746820 534e5073 20776869 63682062 ith SNPs which b\n+ 0x004042c8 65636f6d 65207374 726f6e67 20656e6f ecome strong eno\n+ 0x004042d8 75676820 746f2062 65206d69 7374616b ugh to be mistak\n+ 0x004042e8 656e2066 6f722070 6f737369 626c6520 en for possible \n+ 0x004042f8 72657065 6174732e 00000000 0a412063 repeats......A c\n+ 0x00404308 6f766572 61676520 6f66203e 33303078 overage of >300x\n+ 0x00404318 202e2e2e 206e6f20 7265616c 6c792c20 ... no really, \n+ 0x00404328 61726520 796f7520 6b696464 696e6720 are you kidding \n+ 0x00404338 6d653f20 2a736967 682a0000 0a576974 me? *sigh*...Wit\n+ 0x00404348 68207468 6520636f 76657261 67652079 h the coverage y\n+ 0x00404358 6f752063 75727265 6e746c79 20686176 ou currently hav\n+ 0x00404368 652c2079 6f75202a 7265616c 6c792a20 e, you *really* \n+ 0x00404378 73686f75 6c642064 6f776e73 616d706c should downsampl\n+ 0x00404388 6520796f 75722064 6174612e 20596f75 e your data. You\n+ 0x00404398 2e204861 76652e20 4265656e 2e205761 . Have. Been. Wa\n+ 0x004043a8 726e6564 21000000 0a4f6620 636f7572 rned!....Of cour\n+ 0x004043b8 73652c20 796f7520 63616e20 616c7761 se, you can alwa\n+ 0x004043c8 79732063 686f6f73 6520746f 2069676e ys choose to ign\n+ 0x004043d8 6f726520 74686573 65207761 726e696e ore these warnin\n+ 0x004043e8 67206279 20636861 6e67696e 67202d4e g by changing -N\n+ 0x004043f8 573a6361 6320616e 64202d4e 573a6163 W:cac and -NW:ac\n+ 0x00404408 762e0000 4153434f 565f5645 52595f48 v...ASCOV_VERY_H\n+ 0x00404418 49474800 56657279 20686967 68206176 IGH.Very high av\n+ 0x00404428 65726167 6520636f 76657261 67650000 erage coverage..\n+ 0x00404438 48617368 20616e61 6c797369 7320666f Hash analysis fo\n+ 0x00404448 72200000 70726f70 6f736564 20637574 r ..proposed cut\n+ 0x00404458 6261636b 73000000 20616e64 20000000 backs... and ...\n+ 0x00404468 6368696d 65726120 73656172 63680000 chimera search..\n+ 0x00404478 72656164 20656469 74696e67 00000000 read editing....\n+ 0x00404488 72617265 206b6d65 72206d61 736b696e rare kmer maskin\n+ 0x00404498 67000000 436f756c 64206e6f 74206f70 g...Could not op\n+ 0x004044a8 656e206c 6f672066 6f722061 7070656e en log for appen\n+ 0x004044b8 64696e67 3a200000 0a506f73 7369626c ding: ...Possibl\n+ 0x004044c8 65206361 75736573 3a204469 736b2066 e causes: Disk f\n+ 0x004044d8 756c6c3f 20436861 6e676564 20706572 ull? Changed per\n+ 0x004044e8 6d697373 696f6e73 3f204469 72656374 missions? Direct\n+ 0x004044f8 6f727920 64656c65 7465643f 00000000 ory deleted?....\n+ 0x00404508 766f6964 20417373 656d626c 793a3a70 void Assembly::p\n+ 0x00404518 6572666f 726d5072 6f706f73 65644375 erformProposedCu\n+ 0x00404528 74626163 6b436c69 70732863 6f6e7374 tbackClips(const\n+ 0x00404538 20737464 3a3a7374 72696e67 2026206c std::string & l\n+ 0x00404548 6f676e61 6d652c20 636f6e73 74207374 ogname, const st\n+ 0x00404558 643a3a73 7472696e 67202620 6c6f6770 d::string & logp\n+ 0x00404568 72656669 78290000 2d434c3a 70656362 refix)..-CL:pecb\n+ 0x00404578 70682063 616e2072 756e206f 6e6c7920 ph can run only \n+ 0x00404588 77697468 20757020 746f2033 322c2079 with up to 32, y\n+ 0x00404598 6f752073 65742069 7420746f 20000000 ou set it to ...\n+ 0x004045a8 2e204d49 52412073 686f756c 64277665 . MIRA should've\n+ 0x004045b8 20776172 6e656420 6561726c 69657220 warned earlier \n+ 0x004045c8 74686f75 67682e0a 00000000 2f706563 though....../pec\n+ 0x004045d8 6b6d6572 73746174 2e6d6873 2e677a00 kmerstat.mhs.gz.\n+ 0x004045e8 50657266 6f726d69 6e672050 45432053 Performing PEC S\n+ 0x004045f8 44424720 65646974 733a0a00 48756e74 DBG edits:..Hunt\n+ 0x00404608 696e6720 646f776e 20636869 6d657261 ing down chimera\n+ 0x00404618 733a0a00 50454300 0a504543 20636869 s:..PEC..PEC chi\n+ 0x00404628 6d657261 2074726f 70687920 636f756e mera trophy coun\n+ 0x00404638 743a2000 41535f63 75727265 6e745f72 t: .AS_current_r\n+ 0x00404648 6c735f62 7972672e 73697a65 28292000 ls_byrg.size() .\n+ 0x00404658 20213d20 52656164 47726f75 704c6962 != ReadGroupLib\n+ 0x00404668 3a3a6765 744e756d 52656164 47726f75 ::getNumReadGrou\n+ 0x00404678 70732829 20000000 41535f63 75727265 ps() ...AS_curre\n+ 0x00404688 6e745f72 6c735f62 79747970 652e7369 nt_rls_bytype.si\n+ 0x00404698 7a652829 20000000 20213d20 52656164 ze() ... != Read\n+ 0x004046a8 47726f75 704c6962 3a3a6765 744e756d GroupLib::getNum\n+ 0x004046b8 53657175 656e6369 6e675479 70657328 SequencingTypes(\n+ 0x004046c8 29200000 52656c6f 6164696e 67207374 ) ..Reloading st\n+ 0x004046d8 61746973 74696373 20332000 0a504543 atistics 3 ..PEC\n+ 0x004046e8 20534442 47206564 69746564 20726561 SDBG edited rea\n+ 0x004046f8 64733a20 00000000 52656c6f 6164696e ds: ....Reloadin\n+ 0x00404708 67207374 61746973 74696373 20342000 g statistics 4 .\n+ 0x00404718 41737369 676e696e 67207374 61746973 Assigning statis\n+ 0x00404728 74696373 2076616c 75657320 2831293a tics values (1):\n+ 0x00404738 0a000000 48696768 20617665 72616765 ....High average\n+ 0x00404748 20636f76 65726167 65206465 74656374 coverage detect\n+ 0x00404758 65642c20 73656520 6f757470 7574206c ed, see output l\n+ 0x00404768 6f672061 626f7665 20726573 70656374 og above respect\n+ 0x00404778 6976656c 79207468 65202757 41524e49 ively the 'WARNI\n+ 0x00404788 4e472720 66696c65 7320696e 20746865 NG' files in the\n+ 0x00404798 20696e66 6f206469 72656374 6f727920 info directory \n+ 0x004047a8 666f7220 6d6f7265 20696e66 6f726d61 for more informa\n+ 0x004047b8 74696f6e 2e20496e 20636173 6520796f tion. In case yo\n+ 0x004047c8 75207769 73682074 6f20666f 72636520 u wish to force \n+ 0x004047d8 4d495241 20746f20 64697372 65676172 MIRA to disregar\n+ 0x004047e8 64207468 69732073 61666574 79206368 d this safety ch\n+ 0x004047f8 65636b2c 20636f6e 73696465 72207573 eck, consider us\n+ 0x00404808 696e6720 272d4e57 3a636163 3d776172 ing '-NW:cac=war\n+ 0x00404818 6e27206f 7220272d 4e573a63 61633d6e n' or '-NW:cac=n\n+ 0x00404828 6f270000 67676300 4c6f6f6b 696e6720 o'..ggc.Looking \n+ 0x00404838 666f7220 70726f70 6f736564 20637574 for proposed cut\n+ 0x00404848 6261636b 73202e2e 2e200000 206c6566 backs ... .. lef\n+ 0x00404858 74200000 202d3e20 00000000 6b696c6c t .. -> ....kill\n+ 0x00404868 65640a00 20726967 68742000 72706f73 ed.. right .rpos\n+ 0x00404878 3e722e67 65745269 67687443 6c69706f >r.getRightClipo\n+ 0x00404888 66662829 203f3f3f 00000000 706f7373 ff() ???....poss\n+ 0x00404898 69626c65 20536f6c 65786120 4747432e ible Solexa GGC.\n+ 0x004048a8 47207072 6f626c65 6d200000 206b696c G problem .. kil\n+ 0x004048b8 6c65642c 2072656d 61696e69 6e67206c led, remaining l\n+ 0x004048c8 656e6774 68202800 646f6e65 2e0a5065 ength (.done..Pe\n+ 0x004048d8 72666f72 6d656420 636c6970 733a0000 rformed clips:..\n+ 0x004048e8 0a094e75 6d207265 61647320 636c6970 ..Num reads clip\n+ 0x004048f8 6564206c 6566743a 20000000 0a094e75 ed left: .....Nu\n+ 0x00404908 6d207265 61647320 636c6970 65642072 m reads cliped r\n+ 0x00404918 69676874 3a200000 0a094e75 6d207265 ight: ....Num re\n+ 0x00404928 61647320 636f6d70 6c657465 6c79206b ads completely k\n+ 0x00404938 696c6c65 643a2000 0a09546f 74616c20 illed: ...Total \n+ 0x00404948 62617365 7320636c 69707065 64202020 bases clipped \n+ 0x00404958 20202020 20203a20 00000000 43616e6e : ....Cann\n+ 0x00404968 6f742070 6572666f 726d2061 20686173 ot perform a has\n+ 0x00404978 6820616e 616c7973 69732077 69746820 h analysis with \n+ 0x00404988 2d534b3a 62706820 3e203235 36202879 -SK:bph > 256 (y\n+ 0x00404998 6f752075 73656420 00000000 766f6964 ou used ....void\n+ 0x004049a8 20417373 656d626c 793a3a70 6572666f Assembly::perfo\n+ 0x004049b8 726d4861 7368416e 616c7973 69732829 rmHashAnalysis()\n+ 0x004049c8 00000000 656c6f67 2e64702e 68617368 ....elog.dp.hash\n+ 0x004049d8 616e616c 79736973 5f706173 73000000 analysis_pass...\n+ 0x004049e8 656c6f67 20686173 68616e3a 20000000 elog hashan: ...\n+ 0x004049f8 0a4e6f20 76656374 6f722063 6c697070 .No vector clipp\n+ 0x00404a08 696e6720 696e666f 726d6174 696f6e20 ing information \n+ 0x00404a18 61766169 6c61626c 652c2061 626f7274 available, abort\n+ 0x00404a28 696e6720 76656374 6f722063 6c69702e ing vector clip.\n+ 0x00404a38 0a000000 0a43616c 63756c61 74696e67 .....Calculating\n+ 0x00404a48 20706f73 7369626c 65207665 63746f72 possible vector\n+ 0x00404a58 206c6566 746f7665 7273202e 2e2e2000 leftovers ... .\n+ 0x00404a68 436c6970 70656420 00000000 20626173 Clipped .... bas\n+ 0x00404a78 6573206f 6e207468 65206c65 6674206f es on the left o\n+ 0x00404a88 66200000 4e6f7420 636c6970 70656420 f ..Not clipped \n+ 0x00404a98 00000000 202c2074 6f6f206c 6f6e672e .... , too long.\n+ 0x00404aa8 0a000000 41727261 7973206d 69736d61 ....Arrays misma\n+ 0x00404ab8 7463683f 20636875 6e746c65 66746375 tch? chuntleftcu\n+ 0x00404ac8 742e7369 7a652829 213d6368 756e7472 t.size()!=chuntr\n+ 0x00404ad8 69676874 6375742e 73697a65 20262620 ightcut.size && \n+ 0x00404ae8 6368756e 746c6566 74637574 2e73697a chuntleftcut.siz\n+ 0x00404af8 65282920 213d2041 535f7265 6164706f e() != AS_readpo\n+ 0x00404b08 6f6c2e73 697a6528 29000000 766f6964 ol.size()...void\n+ 0x00404b18 20417373 656d626c 793a3a63 75744261 Assembly::cutBa\n+ 0x00404b28 636b506f 73736962 6c654368 696d6572 ckPossibleChimer\n+ 0x00404b38 61732863 6f6e7374 20737464 3a3a7374 as(const std::st\n+ 0x00404b48 72696e67 2026206c 6f676e61 6d652c20 ring & logname, \n+ 0x00404b58 636f6e73 74207374 643a3a73 7472696e const std::strin\n+ 0x00404b68 67202620 6c6f6770 72656669 782c2063 g & logprefix, c\n+ 0x00404b78 6f6e7374 20737464 3a3a7665 63746f72 onst std::vector\n+ 0x00404b88 3c696e74 33323e20 26206368 756e746c <int32> & chuntl\n+ 0x00404b98 65667463 75742c20 636f6e73 74207374 eftcut, const st\n+ 0x00404ba8 643a3a76 6563746f 723c696e 7433323e d::vector<int32>\n+ 0x00404bb8 20262063 68756e74 72696768 74637574 & chuntrightcut\n+ 0x00404bc8 29000000 43757474 696e6720 6261636b )...Cutting back\n+ 0x00404bd8 20706f73 7369626c 65206368 696d6572 possible chimer\n+ 0x00404be8 6173202e 2e2e2000 20706f73 7369626c as ... . possibl\n+ 0x00404bf8 65206368 696d6572 613a2000 095b0000 e chimera: ..[..\n+ 0x00404c08 5b207573 696e6720 63667261 67200000 [ using cfrag ..\n+ 0x00404c18 20637574 20626163 6b20746f 20000000 cut back to ...\n+ 0x00404c28 5b0a0000 2072656d 6f766564 20706f73 [... removed pos\n+ 0x00404c38 7369626c 65206a75 6e6b3a20 00000000 sible junk: ....\n+ 0x00404c48 20756e74 6f756368 65642070 6f737369 untouched possi\n+ 0x00404c58 626c6520 6a756e6b 3a200000 626f6f6c ble junk: ..bool\n+ 0x00404c68 20417373 656d626c 793a3a77 61726e43 Assembly::warnC\n+ 0x00404c78 68696d65 7261436f 6e74656e 74282900 himeraContent().\n+ 0x00404c88 7374696c 6c206578 63656c6c 656e742c still excellent,\n+ 0x00404c98 206e6f20 6e656564 20746f20 776f7272 no need to worr\n+ 0x00404ca8 79000000 6f6b2c20 62757420 636f756c y...ok, but coul\n+ 0x00404cb8 64206265 20626574 74657200 6e6f7420 d be better.not \n+ 0x00404cc8 676f6f64 00000000 6d656469 6f637265 good....mediocre\n+ 0x00404cd8 00000000 696e6163 63657074 61626c65 ....inacceptable\n+ 0x00404ce8 00000000 6162736f 6c757465 6c792061 ....absolutely a\n+ 0x00404cf8 7070616c 6c696e67 00000000 6120636f ppalling....a co\n+ 0x00404d08 6d706c65 74652063 61746173 74726f70 mplete catastrop\n+ 0x00404d18 68650000 61207265 61736f6e 20746f20 he..a reason to \n+ 0x00404d28 73686f6f 74207468 65206861 72646469 shoot the harddi\n+ 0x00404d38 736b2063 6f6e7461 696e696e 67207468 sk containing th\n+ 0x00404d48 69732064 61746100 4d495241 20646574 is data.MIRA det\n+ 0x00404d58 65637465 64206368 696d6572 69632073 ected chimeric s\n+ 0x00404d68 65717565 6e636573 20696e20 28617420 equences in (at \n+ 0x00404d78 6c656173 7429206f 6e65206f 6620796f least) one of yo\n+ 0x00404d88 75722072 65616467 726f7570 732e2054 ur readgroups. T\n+ 0x00404d98 6865206d 6178696d 756d2070 65726365 he maximum perce\n+ 0x00404da8 6e746167 6520666f 756e6420 77617320 ntage found was \n+ 0x00404db8 00000000 3c302e30 30350000 252e3266 ....<0.005..%.2f\n+ 0x00404dc8 00000000 252c2077 68696368 20697320 ....%, which is \n+ 0x00404dd8 00000000 0a0a596f 75722073 65717565 ......Your seque\n+ 0x00404de8 6e63696e 67207072 6f766964 65722061 ncing provider a\n+ 0x00404df8 62736f6c 7574656c 79206e65 65647320 bsolutely needs \n+ 0x00404e08 746f2067 6574206c 6f776572 206e756d to get lower num\n+ 0x00404e18 62657273 2c207461 6c6b2074 6f207468 bers, talk to th\n+ 0x00404e28 656d2061 626f7574 2069742e 00000000 em about it.....\n+ 0x00404e38 0a0a4920 73756767 65737420 796f7520 ..I suggest you \n+ 0x00404e48 61736b20 796f7572 20736571 75656e63 ask your sequenc\n+ 0x00404e58 696e6720 70726f76 69646572 2061626f ing provider abo\n+ 0x00404e68 75742074 6869732e 00000000 0a0a4173 ut this.......As\n+ 0x00404e78 20746869 73206973 20612067 656e6f6d this is a genom\n+ 0x00404e88 65206173 73656d62 6c792c20 796f7520 e assembly, you \n+ 0x00404e98 73686f75 6c642062 65206162 6c652074 should be able t\n+ 0x00404ea8 6f206765 74206177 61792077 69746820 o get away with \n+ 0x00404eb8 69742e20 42757420 73686f75 6c642079 it. But should y\n+ 0x00404ec8 6f752075 73652074 68652073 616d6520 ou use the same \n+ 0x00404ed8 6c696272 61727920 70726f74 6f636f6c library protocol\n+ 0x00404ee8 7320666f 72207365 7175656e 63696e67 s for sequencing\n+ 0x00404ef8 206f6620 524e4153 65712f45 53542064 of RNASeq/EST d\n+ 0x00404f08 6174612c 20746869 73207769 6c6c2063 ata, this will c\n+ 0x00404f18 72656174 65207072 6f626c65 6d732e00 reate problems..\n+ 0x00404f28 0a0a5573 696e6720 61206c69 62726172 ..Using a librar\n+ 0x00404f38 79207769 74682074 68697320 616d6f75 y with this amou\n+ 0x00404f48 6e74206f 66206368 696d6572 69632072 nt of chimeric r\n+ 0x00404f58 65616473 20697320 76657279 2c207665 eads is very, ve\n+ 0x00404f68 72792064 616e6765 726f7573 20696e20 ry dangerous in \n+ 0x00404f78 524e4153 65712f45 53542070 726f6a65 RNASeq/EST proje\n+ 0x00404f88 6374732e 00000000 0a0a5468 65207265 cts.......The re\n+ 0x00404f98 61647320 64657465 63746564 20617320 ads detected as \n+ 0x00404fa8 6368696d 65726963 20617265 2064656e chimeric are den\n+ 0x00404fb8 6f746564 20696e20 74686520 27646562 oted in the 'deb\n+ 0x00404fc8 72697327 2066696c 6520696e 20746865 ris' file in the\n+ 0x00404fd8 20696e66 6f206469 72656374 6f72792c info directory,\n+ 0x00404fe8 20746865 20636f64 65207468 65792061 the code they a\n+ 0x00404ff8 7265206d 61726b65 64207769 74682069 re marked with i\n+ 0x00405008 7320434c 49505f43 48494d45 52410000 s CLIP_CHIMERA..\n+ 0x00405018 4348494d 45524943 5f524541 44530000 CHIMERIC_READS..\n+ 0x00405028 52656164 67726f75 70207769 74682063 Readgroup with c\n+ 0x00405038 68696d65 72696320 72656164 73000000 himeric reads...\n+ 0x00405048 41544720 50524544 49435449 4f4e530a ATG PREDICTIONS.\n+ 0x00405058 00000000 72676964 3a200000 09633a20 ....rgid: ...c: \n+ 0x00405068 00000000 0973703a 20000000 29096d3a .....sp: ...).m:\n+ 0x00405078 20000000 09643a20 00000000 09733a20 ....d: .....s: \n+ 0x00405088 00000000 092d3a20 00000000 092b3a20 .....-: .....+: \n+ 0x00405098 00000000 46696e61 6c207072 65646963 ....Final predic\n+ 0x004050a8 74696f6e 3a200000 20697320 696e7661 tion: .. is inva\n+ 0x004050b8 6c69642e 00000000 53657420 74656d70 lid.....Set temp\n+ 0x004050c8 6c617465 2073697a 652e0a00 53657420 late size...Set \n+ 0x004050d8 7365676d 656e7420 706c6163 656d656e segment placemen\n+ 0x004050e8 7420636f 64652e0a 00000000 0a536561 t code.......Sea\n+ 0x004050f8 72636869 6e672070 6f737369 626c6520 rching possible \n+ 0x00405108 72656164 20657874 656e7369 6f6e7320 read extensions \n+ 0x00405118 28666f72 2053616e 67657220 616e642f (for Sanger and/\n+ 0x00405128 6f722034 3534293a 0a000000 766f6964 or 454):....void\n+ 0x00405138 20417373 656d626c 793a3a65 7874656e Assembly::exten\n+ 0x00405148 64414453 28696e74 33322076 65727369 dADS(int32 versi\n+ 0x00405158 6f6e2c20 636f6e73 74207374 643a3a73 on, const std::s\n+ 0x00405168 7472696e 67207072 65666978 2c20636f tring prefix, co\n+ 0x00405178 6e737420 7374643a 3a737472 696e6720 nst std::string \n+ 0x00405188 706f7374 6669782c 20636f6e 73742073 postfix, const s\n+ 0x00405198 74643a3a 73747269 6e67206c 6f676e61 td::string logna\n+ 0x004051a8 6d652900 0a436861 6e676564 206c656e me)..Changed len\n+ 0x004051b8 67746820 6f662000 20736571 75656e63 gth of . sequenc\n+ 0x004051c8 65732e00 4d65616e 206c656e 67746820 es..Mean length \n+ 0x004051d8 6761696e 65642069 6e207468 65736520 gained in these \n+ 0x004051e8 73657175 656e6365 733a2000 766f6964 sequences: .void\n+ 0x004051f8 20417373 656d626c 793a3a70 7269765f Assembly::priv_\n+ 0x00405208 70686168 656c7065 72287569 6e743332 phahelper(uint32\n+ 0x00405218 20626173 65737065 72686173 682c2062 basesperhash, b\n+ 0x00405228 6f6f6c20 72617265 6b6d6572 66696e61 ool rarekmerfina\n+ 0x00405238 6c6b696c 6c2c2069 6e743332 20766572 lkill, int32 ver\n+ 0x00405248 73696f6e 2c20636f 6e737420 7374643a sion, const std:\n+ 0x00405258 3a737472 696e6720 70726566 69782c20 :string prefix, \n+ 0x00405268 636f6e73 74207374 643a3a73 7472696e const std::strin\n+ 0x00405278 6720706f 73746669 782c2063 6f6e7374 g postfix, const\n+ 0x00405288 20737464 3a3a7374 72696e67 206c6f67 std::string log\n+ 0x00405298 6e616d65 29000000 73746174 69632062 name)...static b\n+ 0x004052a8 6f6f6c20 52656164 47726f75 704c6962 ool ReadGroupLib\n+ 0x004052b8 3a3a7365 74536567 6d656e74 506c6163 ::setSegmentPlac\n+ 0x004052c8 656d656e 74287267 69645f74 206c6962 ement(rgid_t lib\n+ 0x004052d8 69642c20 636f6e73 7420696e 74382063 id, const int8 c\n+ 0x004052e8 6f646529 00000000 4d61736b 696e6720 ode)....Masking \n+ 0x004052f8 6f66206e 61737479 20726570 65617473 of nasty repeats\n+ 0x00405308 20737769 74636865 64206f66 20617320 switched of as \n+ 0x00405318 64696769 6e6f726d 20616c72 65616479 diginorm already\n+ 0x00405328 2072616e 2e0a0000 48412d00 0a48412d ran....HA-..HA-\n+ 0x00405338 00000000 52656c6f 6164696e 67207374 ....Reloading st\n+ 0x00405348 61746973 74696373 20312000 50657266 atistics 1 .Perf\n+ 0x00405358 6f726d69 6e672048 41205344 42472065 orming HA SDBG e\n+ 0x00405368 64697473 3a0a0000 0a484120 53444247 dits:....HA SDBG\n+ 0x00405378 20656469 74656420 72656164 733a2000 edited reads: .\n+ 0x00405388 52656c6f 6164696e 67207374 61746973 Reloading statis\n+ 0x00405398 74696373 20322000 45737469 6d61746f tics 2 .Estimato\n+ 0x004053a8 72206f66 20617665 72616765 20636f76 r of average cov\n+ 0x004053b8 65726167 653a2000 41737369 676e696e erage: .Assignin\n+ 0x004053c8 67207374 61746973 74696373 2076616c g statistics val\n+ 0x004053d8 75657320 2832293a 0a000000 41737369 ues (2):....Assi\n+ 0x004053e8 676e696e 67207374 61746973 74696373 gning statistics\n+ 0x004053f8 2076616c 75657320 2833293a 0a000000 values (3):....\n+ 0x00405408 57726974 696e6720 72656164 20726570 Writing read rep\n+ 0x00405418 65617420 696e666f 20746f3a 20000000 eat info to: ...\n+ 0x00405428 20736571 75656e63 65732077 69746820 sequences with \n+ 0x00405438 00000000 206d6173 6b656420 73747265 .... masked stre\n+ 0x00405448 74636865 732e0000 50657266 6f726d69 tches...Performi\n+ 0x00405458 6e672064 69676974 616c206e 6f726d61 ng digital norma\n+ 0x00405468 6c697361 74696f6e 3a200000 20202020 lisation: .. \n+ 0x00405478 20202020 20202020 20202020 20202020 \n+ 0x00405488 20000000 41626f72 743a2072 756e6177 ...Abort: runaw\n+ 0x00405498 61797374 6f700a00 0a202020 20202020 aystop... \n+ 0x004054a8 20202020 20202020 20202020 20200000 ..\n+ 0x004054b8 4c4f4355 53202020 20202020 00000000 LOCUS ....\n+ 0x004054c8 20627020 20202044 4e412020 20202045 bp DNA E\n+ 0x004054d8 4e562020 20200000 25642d25 622d2559 NV ..%d-%b-%Y\n+ 0x004054e8 00000000 534f5552 43452020 20202020 ....SOURCE \n+ 0x004054f8 00000000 444e412c 20737472 61696e3a ....DNA, strain:\n+ 0x00405508 20000000 0a414343 45535349 4f4e2020 ....ACCESSION \n+ 0x00405518 20000000 0a434f4d 4d454e54 20202020 ....COMMENT \n+ 0x00405528 2047656e 65726174 65642062 79207468 Generated by th\n+ 0x00405538 65204d49 52412061 7373656d 626c6572 e MIRA assembler\n+ 0x00405548 0a464541 54555245 53202020 20202020 .FEATURES \n+ 0x00405558 20202020 20204c6f 63617469 6f6e2f51 Location/Q\n+ 0x00405568 75616c69 66696572 730a2020 20202073 ualifiers. s\n+ 0x00405578 6f757263 65202020 20202020 20202031 ource 1\n+ 0x00405588 2e2e0000 20202020 20202020 20202020 .... \n+ 0x00405598 20202020 20202020 202f7374 7261696e /strain\n+ 0x004055a8 3d220000 4f524947 494e0a00 636f6d70 =\"..ORIGIN..comp\n+ 0x004055b8 6c656d65 6e742800 2f67656e 65000000 lement(./gene...\n+ 0x004055c8 2f6c6f63 75735f74 61670000 2f66756e /locus_tag../fun\n+ 0x004055d8 6374696f 6e000000 2f45435f 6e756d62 ction.../EC_numb\n+ 0x004055e8 65720000 2f70726f 64756374 00000000 er../product....\n+ 0x004055f8 2f6e6f74 65000000 2f747261 6e736c61 /note.../transla\n+ 0x00405608 74696f6e 00000000 4572726f 72207768 tion....Error wh\n+ 0x00405618 696c6520 64756d70 696e6720 00000000 ile dumping ....\n+ 0x00405628 766f6964 2064756d 70436f6e 74696773 void dumpContigs\n+ 0x00405638 28737464 3a3a6c69 73743c43 6f6e7469 (std::list<Conti\n+ 0x00405648 673e2026 20636c69 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