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gromacs_gmxprepr\n-00002170: 6f63 6573 733c 2f74 6974 6c65 3e0a 3c65 ocess..g\n-00002230: 6d78 7072 6570 726f 6365 7373 3c2f 7465 mxpreprocess....\n-000022c0: 6d6f 6475 6c65 5f73 7263 5f70 726f 6772 module_src_progr\n-000022d0: 616d 735f 6d64 7275 6e5f 7465 7374 7326 ams_mdrun_tests&\n-000022e0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-000022f0: 7263 5f67 726f 6d61 6373 5f67 6d78 7072 rc_gromacs_gmxpr\n-00002300: 6570 726f 6365 7373 3c2f 7469 746c 653e eprocess\n-00002310: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ....<\n-000024c0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-000024d0: 726f 6d61 6373 5f63 6f6d 6d61 6e64 6c69 romacs_commandli\n-000024e0: 6e65 202d 2d3e 0a3c 6720 6964 3d22 6e6f ne -->..modul\n-00002510: 655f 7372 635f 6772 6f6d 6163 735f 636f e_src_gromacs_co\n-00002520: 6d6d 616e 646c 696e 653c 2f74 6974 6c65 mmandline</title\n-00002530: 3e0a 3c67 2069 643d 2261 5f6e 6f64 6534 >.<g id=\"a_node4\n-00002540: 3422 3e3c 6120 786c 696e 6b3a 6872 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646c 6962 3c2f 7469 romacs_mdlib..mdlib\n-000036a0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....module\n-00003710: 5f73 7263 5f67 726f 6d61 6373 5f69 6d64 _src_gromacs_imd\n-00003720: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-00003730: 7372 635f 6772 6f6d 6163 735f 6d64 6c69 src_gromacs_mdli\n-00003740: 623c 2f74 6974 6c65 3e0a 3c70 6174 6820 b......\n-00003890: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-000038a0: 6373 5f69 6d64 2623 3435 3b26 6774 3b6d cs_imd->m\n-000038b0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-000038c0: 735f 6669 6c65 696f 3c2f 7469 746c 653e s_fileio\n-000038d0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......m\n-00003a20: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00003a30: 735f 6d64 7479 7065 733c 2f74 6974 6c65 s_mdtypes</title\n-00003a40: 3e0a 3c65 6c6c 6970 7365 2066 696c 6c3d >.<ellipse fill=\n-00003a50: 2223 6266 6266 6266 2220 7374 726f 6b65 \"#bfbfbf\" stroke\n-00003a60: 3d22 626c 6163 6b22 2063 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626c 6573 3c2f 7469 omacs_tables...tables.<\n-00007000: 2f61 3e0a 3c2f 673e 0a3c 2f67 3e0a 3c21 /a>.....\n-00007070: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n-00007080: 635f 6772 6f6d 6163 735f 676d 786c 6962 c_gromacs_gmxlib\n-00007090: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-000070a0: 7372 635f 6772 6f6d 6163 735f 7461 626c src_gromacs_tabl\n-000070b0: 6573 3c2f 7469 746c 653e 0a3c 7061 7468 es...<\n-00007280: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modu\n-000072f0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n-00007300: 6d78 6c69 6226 2334 353b 2667 743b 6d6f mxlib->mo\n-00007310: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00007320: 5f6d 646c 6962 3c2f 7469 746c 653e 0a3c _mdlib.<\n-00007330: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-00007340: 2073 7472 6f6b 653d 2223 3263 6363 3238 stroke=\"#2ccc28\n-00007350: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n-00007360: 6179 3d22 352c 3222 2064 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6373 5f74 le_src_gromacs_t\n-00008a90: 6f6f 6c73 2623 3435 3b26 6774 3b6d 6f64 ools->mod\n-00008aa0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00008ab0: 6577 616c 643c 2f74 6974 6c65 3e0a 3c70 ewald....\n-00008c80: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..mo\n-00008cd0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00008ce0: 5f6c 6973 7465 645f 666f 7263 6573 3c2f _listed_forces</\n-00008cf0: 7469 746c 653e 0a3c 6720 6964 3d22 615f title>.<g id=\"a_\n-00008d00: 6e6f 6465 3336 223e 3c61 2078 6c69 6e6b node36\"><a xlink\n-00008d10: 3a68 7265 663d 2267 726f 7570 5f5f 6d6f :href=\"group__mo\n-00008d20: 6475 6c65 5f5f 6c69 7374 6564 5f5f 666f dule__listed__fo\n-00008d30: 7263 6573 2e78 6874 6d6c 2220 7461 7267 rces.xhtml\" targ\n-00008d40: 6574 3d22 5f74 6f70 2220 786c 696e 6b3a et=\"_top\" xlink:\n-00008d50: 7469 746c 653d 226c 6973 7465 645f 666f title=\"listed_fo\n-00008d60: 7263 6573 223e 0a3c 656c 6c69 7073 6520 rces\">.<ellipse \n-00008d70: 6669 6c6c 3d22 2365 3563 6366 6622 2073 fill=\"#e5ccff\" s\n-00008d80: 7472 6f6b 653d 2262 6c61 636b 2220 6378 troke=\"black\" cx\n-00008d90: 3d22 3431 3422 2063 793d 222d 3135 352e =\"414\" cy=\"-155.\n-00008da0: 3138 2220 7278 3d22 3530 2e38 3222 2072 18\" rx=\"50.82\" r\n-00008db0: 793d 2231 332e 3337 222f 3e0a 3c74 6578 y=\"13.37\"/>.<tex\n-00008dc0: 7420 7465 7874 2d61 6e63 686f 723d 226d t text-anchor=\"m\n-00008dd0: 6964 646c 6522 2078 3d22 3431 3422 2079 iddle\" x=\"414\" y\n-00008de0: 3d22 2d31 3532 2e36 3822 2066 6f6e 742d =\"-152.68\" font-\n-00008df0: 6661 6d69 6c79 3d22 4672 6565 5361 6e73 family=\"FreeSans\n-00008e00: 2220 666f 6e74 2d73 697a 653d 2231 302e \" font-size=\"10.\n-00008e10: 3030 223e 6c69 7374 6564 5f66 6f72 6365 00\">listed_force\n-00008e20: 733c 2f74 6578 743e 0a3c 2f61 3e0a 3c2f s</text>.</a>.</\n-00008e30: 673e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 g>.</g>.<!-- mod\n-00008e40: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00008e50: 746f 6f6c 7326 2334 353b 2667 743b 6d6f tools->mo\n-00008e60: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00008e70: 5f6c 6973 7465 645f 666f 7263 6573 202d _listed_forces -\n-00008e80: 2d3e 0a3c 6720 6964 3d22 6564 6765 3335 ->.<g id=\"edge35\n-00008e90: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n-00008ea0: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n-00008eb0: 635f 6772 6f6d 6163 735f 746f 6f6c 7326 c_gromacs_tools&\n-00008ec0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-00008ed0: 7263 5f67 726f 6d61 6373 5f6c 6973 7465 rc_gromacs_liste\n-00008ee0: 645f 666f 7263 6573 3c2f 7469 746c 653e d_forces\n-00008ef0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e .\n-00008fe0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .\n-00009050: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....mod\n-000090a0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-000090b0: 7261 6e64 6f6d 3c2f 7469 746c 653e 0a3c random.<\n-000090c0: 6720 6964 3d22 615f 6e6f 6465 3338 223e g 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5f74 6162 6c65 7326 2334 353b 2667 743b _tables->\n-00009850: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00009860: 6373 5f66 696c 6569 6f20 2d2d 3e0a 3c67 cs_fileio -->.<g\n-00009870: 2069 643d 2265 6467 6534 3522 2063 6c61 id=\"edge45\" cla\n-00009880: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.<titl\n-00009890: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n-000098a0: 6d61 6373 5f74 6162 6c65 7326 2334 353b macs_tables-\n-000098b0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-000098c0: 726f 6d61 6373 5f66 696c 6569 6f3c 2f74 romacs_fileio</t\n-000098d0: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-000098e0: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-000098f0: 2362 6662 6662 6622 2064 3d22 4d35 3031 #bfbfbf\" d=\"M501\n-00009900: 2e35 372c 2d39 392e 3133 4335 3536 2e37 .57,-99.13C556.7\n-00009910: 332c 2d31 3131 2e32 3820 3637 382e 3832 3,-111.28 678.82\n-00009920: 2c2d 3133 382e 3436 2036 3832 2c2d 3134 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2c2d 3533 352e 3335 2031 3035 372e 3737 ,-535.35 1057.77\n-00009a20: 2c2d 3533 312e 3820 3130 3437 2e37 362c ,-531.8 1047.76,\n-00009a30: 2d35 3238 2e33 3520 3130 3437 2e37 392c -528.35 1047.79,\n-00009a40: 2d35 3335 2e33 3522 2f3e 0a3c 2f67 3e0a -535.35\"/>.</g>.\n-00009a50: 3c21 2d2d 206d 6f64 756c 655f 7372 635f <!-- module_src_\n-00009a60: 6772 6f6d 6163 735f 7461 626c 6573 2623 gromacs_tables&#\n-00009a70: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-00009a80: 635f 6772 6f6d 6163 735f 6d64 7479 7065 c_gromacs_mdtype\n-00009a90: 7320 2d2d 3e0a 3c67 2069 643d 2265 6467 s -->.<g id=\"edg\n-00009aa0: 6534 3722 2063 6c61 7373 3d22 6564 6765 e47\" class=\"edge\n-00009ab0: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n-00009ac0: 5f73 7263 5f67 726f 6d61 6373 5f74 6162 _src_gromacs_tab\n-00009ad0: 6c65 7326 2334 353b 2667 743b 6d6f 6475 les->modu\n-00009ae0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-00009af0: 6474 7970 6573 3c2f 7469 746c 653e 0a3c dtypes.<\n-00009b00: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-00009b10: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n-00009b20: 2220 643d 224d 3437 372e 3338 2c2d 3130 \" d=\"M477.38,-10\n-00009b30: 352e 3739 4334 3739 2e37 352c 2d31 3231 5.79C479.75,-121\n-00009b40: 2e31 3420 3438 312e 3938 2c2d 3134 372e .14 481.98,-147.\n-00009b50: 3733 2034 3734 2c2d 3136 382e 3631 2034 73 474,-168.61 4\n-00009b60: 3530 2e35 372c 2d32 3239 2e39 2033 3737 50.57,-229.9 377\n-00009b70: 2c2d 3231 342e 3320 3337 372c 2d32 3739 ,-214.3 377,-279\n-00009b80: 2e39 3220 3337 372c 2d35 3333 2e34 2033 .92 377,-533.4 3\n-00009b90: 3737 2c2d 3533 332e 3420 3337 372c 2d35 77,-533.4 377,-5\n-00009ba0: 3333 2e34 2033 3737 2c2d 3536 382e 3134 33.4 377,-568.14\n-00009bb0: 2033 3830 2e33 342c 2d35 3738 2e37 3820 380.34,-578.78 \n-00009bc0: 3339 382c 2d36 3038 2e37 2034 3038 2e31 398,-608.7 408.1\n-00009bd0: 332c 2d36 3235 2e38 3720 3434 352e 3732 3,-625.87 445.72\n-00009be0: 2c2d 3636 302e 3037 2034 3632 2c2d 3637 ,-660.07 462,-67\n-00009bf0: 312e 3537 2035 3734 2e34 322c 2d37 3530 1.57 574.42,-750\n-00009c00: 2e39 3820 3631 302e 3634 2c2d 3736 372e .98 610.64,-767.\n-00009c10: 3436 2037 3435 2c2d 3739 372e 3331 2039 46 745,-797.31 9\n-00009c20: 3234 2e33 392c 2d38 3337 2e31 3720 3134 24.39,-837.17 14\n-00009c30: 3939 2e39 2c2d 3834 342e 3236 2031 3637 99.9,-844.26 167\n-00009c40: 302e 3735 2c2d 3834 352e 3439 222f 3e0a 0.75,-845.49\"/>.\n-00009c50: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....module_src_gro\n-00009d40: 6d61 6373 5f74 6162 6c65 7326 2334 353b macs_tables-\n-00009d50: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00009d60: 726f 6d61 6373 5f6d 6473 7061 6e3c 2f74 romacs_mdspan....<\n-00009e60: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-00009e70: 726f 6d61 6373 5f73 656c 6563 7469 6f6e romacs_selection\n-00009e80: 202d 2d3e 0a3c 6720 6964 3d22 6e6f 6465 -->..module_\n-00009eb0: 7372 635f 6772 6f6d 6163 735f 7365 6c65 src_gromacs_sele\n-00009ec0: 6374 696f 6e3c 2f74 6974 6c65 3e0a 3c67 ction.<\n-00009ee0: 6120 786c 696e 6b3a 6872 6566 3d22 6772 a xlink:href=\"gr\n-00009ef0: 6f75 705f 5f6d 6f64 756c 655f 5f73 656c oup__module__sel\n-00009f00: 6563 7469 6f6e 2e78 6874 6d6c 2220 7461 ection.xhtml\" ta\n-00009f10: 7267 6574 3d22 5f74 6f70 2220 786c 696e rget=\"_top\" xlin\n-00009f20: 6b3a 7469 746c 653d 2273 656c 6563 7469 k:title=\"selecti\n-00009f30: 6f6e 223e 0a3c 656c 6c69 7073 6520 6669 on\">..selection...\n-0000a000: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_\n-0000a050: 7372 635f 6772 6f6d 6163 735f 6f70 7469 src_gromacs_opti\n-0000a060: 6f6e 733c 2f74 6974 6c65 3e0a 3c67 2069 ons..<\n-0000a0d0: 656c 6c69 7073 6520 6669 6c6c 3d22 2366 ellipse fill=\"#f\n-0000a0e0: 6665 3463 6322 2073 7472 6f6b 653d 2262 fe4cc\" stroke=\"b\n-0000a0f0: 6c61 636b 2220 6378 3d22 3130 3039 2220 lack\" cx=\"1009\" \n-0000a100: 6379 3d22 2d39 322e 3331 2220 7278 3d22 cy=\"-92.31\" rx=\"\n-0000a110: 3333 2e38 3822 2072 793d 2231 332e 3337 33.88\" ry=\"13.37\n-0000a120: 222f 3e0a 3c74 6578 7420 7465 7874 2d61 \"/>.opti\n-0000a180: 6f6e 733c 2f74 6578 743e 0a3c 2f61 3e0a ons..\n-0000a190: 3c2f 673e 0a3c 2f67 3e0a 3c21 2d2d 206d ...<\n-0000a3d0: 6720 6964 3d22 6564 6765 3438 2220 636c g id=\"edge48\" cl\n-0000a3e0: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.module_src_gr\n-0000a400: 6f6d 6163 735f 7365 6c65 6374 696f 6e26 omacs_selection&\n-0000a410: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0000a420: 7263 5f67 726f 6d61 6373 5f6f 6e6c 696e rc_gromacs_onlin\n-0000a430: 6568 656c 703c 2f74 6974 6c65 3e0a 3c70 ehelp.....<\n-0000a590: 6720 6964 3d22 6564 6765 3530 2220 636c g id=\"edge50\" cl\n-0000a5a0: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.module_src_gr\n-0000a5c0: 6f6d 6163 735f 7365 6c65 6374 696f 6e26 omacs_selection&\n-0000a5d0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0000a5e0: 7263 5f67 726f 6d61 6373 5f72 616e 646f rc_gromacs_rando\n-0000a5f0: 6d3c 2f74 6974 6c65 3e0a 3c70 6174 6820 m....\n-0000a7c0: 0a3c 6720 6964 3d22 6e6f 6465 3132 2220 ..module_src_\n-0000a7f0: 6772 6f6d 6163 735f 7574 696c 6974 793c gromacs_utility<\n-0000a800: 2f74 6974 6c65 3e0a 3c67 2069 643d 2261 /title>...util\n-0000a920: 6974 793c 2f74 6578 743e 0a3c 2f61 3e0a ity..\n-0000a930: 3c2f 673e 0a3c 2f67 3e0a 3c21 2d2d 206d ....module_src_grom\n-0000a990: 6163 735f 636f 6d70 6174 3c2f 7469 746c acs_compat..c\n-0000aa50: 6f6d 7061 743c 2f74 6578 743e 0a3c 2f67 ompat....modu\n-0000aad0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f75 le_src_gromacs_u\n-0000aae0: 7469 6c69 7479 2623 3435 3b26 6774 3b6d tility->m\n-0000aaf0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0000ab00: 735f 636f 6d70 6174 3c2f 7469 746c 653e s_compat\n-0000ab10: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ..\n-0000ac40: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....mo\n-0000aea0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0000aeb0: 5f6d 696d 6963 3c2f 7469 746c 653e 0a3c _mimic.<\n-0000aec0: 656c 6c69 7073 6520 6669 6c6c 3d22 2362 ellipse fill=\"#b\n-0000aed0: 6662 6662 6622 2073 7472 6f6b 653d 2262 fbfbf\" stroke=\"b\n-0000aee0: 6c61 636b 2220 6378 3d22 3132 3939 2220 lack\" cx=\"1299\" \n-0000aef0: 6379 3d22 2d31 3535 2e31 3822 2072 783d cy=\"-155.18\" rx=\n-0000af00: 2233 302e 3331 2220 7279 3d22 3133 2e33 \"30.31\" ry=\"13.3\n-0000af10: 3722 2f3e 0a3c 7465 7874 2074 6578 742d 7\"/>.mi\n-0000af70: 6d69 633c 2f74 6578 743e 0a3c 2f67 3e0a mic..\n-0000af80: 3c21 2d2d 206d 6f64 756c 655f 7372 635f .\n-0000b1e0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n-0000b1f0: 7263 5f67 726f 6d61 6373 5f6d 6174 683c rc_gromacs_math<\n-0000b200: 2f74 6974 6c65 3e0a 3c65 6c6c 6970 7365 /title>.<ellipse\n-0000b210: 2066 696c 6c3d 2223 6266 6266 6266 2220 fill=\"#bfbfbf\" \n-0000b220: 7374 726f 6b65 3d22 626c 6163 6b22 2063 stroke=\"black\" c\n-0000b230: 783d 2235 3730 2220 6379 3d22 2d39 322e x=\"570\" cy=\"-92.\n-0000b240: 3331 2220 7278 3d22 3237 2220 7279 3d22 31\" rx=\"27\" ry=\"\n-0000b250: 3133 2e33 3722 2f3e 0a3c 7465 7874 2074 13.37\"/>.<text t\n-0000b260: 6578 742d 616e 6368 6f72 3d22 6d69 6464 ext-anchor=\"midd\n-0000b270: 6c65 2220 783d 2235 3730 2220 793d 222d le\" x=\"570\" y=\"-\n-0000b280: 3839 2e38 3122 2066 6f6e 742d 6661 6d69 89.81\" font-fami\n-0000b290: 6c79 3d22 4672 6565 5361 6e73 2220 666f ly=\"FreeSans\" fo\n-0000b2a0: 6e74 2d73 697a 653d 2231 302e 3030 223e nt-size=\"10.00\">\n-0000b2b0: 6d61 7468 3c2f 7465 7874 3e0a 3c2f 673e math</text>.</g>\n-0000b2c0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 .<!-- module_src\n-0000b2d0: 5f67 726f 6d61 6373 5f6d 6174 6826 2334 _gromacs_math\n-0000b2e0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0000b2f0: 5f67 726f 6d61 6373 5f6d 6473 7061 6e20 _gromacs_mdspan \n-0000b300: 2d2d 3e0a 3c67 2069 643d 2265 6467 6535 -->.<g id=\"edge5\n-0000b310: 3422 2063 6c61 7373 3d22 6564 6765 223e 4\" class=\"edge\">\n-0000b320: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n-0000b330: 7263 5f67 726f 6d61 6373 5f6d 6174 6826 rc_gromacs_math&\n-0000b340: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0000b350: 7263 5f67 726f 6d61 6373 5f6d 6473 7061 rc_gromacs_mdspa\n-0000b360: 6e3c 2f74 6974 6c65 3e0a 3c70 6174 6820 n...\n-0000b430: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...m\n-0000b4a0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0000b4b0: 735f 6861 7264 7761 7265 2623 3435 3b26 s_hardware-&\n-0000b4c0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-0000b4d0: 6f6d 6163 735f 6770 755f 7574 696c 733c omacs_gpu_utils<\n-0000b4e0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n-0000b4f0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n-0000b500: 3d22 2362 6662 6662 6622 2064 3d22 4d32 =\"#bfbfbf\" d=\"M2\n-0000b510: 3030 362e 3037 2c2d 3130 3837 2e30 3443 006.07,-1087.04C\n-0000b520: 3139 3839 2e34 372c 2d31 3037 372e 3936 1989.47,-1077.96\n-0000b530: 2031 3936 372c 2d31 3036 342e 3438 2031 1967,-1064.48 1\n-0000b540: 3935 302e 3333 2c2d 3130 3533 2e37 222f 950.33,-1053.7\"/\n-0000b550: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n-0000b560: 2223 6266 6266 6266 2220 7374 726f 6b65 \"#bfbfbf\" stroke\n-0000b570: 3d22 2362 6662 6662 6622 2070 6f69 6e74 =\"#bfbfbf\" point\n-0000b580: 733d 2231 3935 322e 3031 2c2d 3130 3530 s=\"1952.01,-1050\n-0000b590: 2e36 3220 3139 3431 2e37 342c 2d31 3034 .62 1941.74,-104\n-0000b5a0: 382e 3034 2031 3934 382e 3136 2c2d 3130 8.04 1948.16,-10\n-0000b5b0: 3536 2e34 3620 3139 3532 2e30 312c 2d31 56.46 1952.01,-1\n-0000b5c0: 3035 302e 3632 222f 3e0a 3c2f 673e 0a3c 050.62\"/>.</g>.<\n-0000b5d0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0000b5e0: 726f 6d61 6373 5f6d 6f64 756c 6172 7369 romacs_modularsi\n-0000b5f0: 6d75 6c61 746f 7220 2d2d 3e0a 3c67 2069 mulator -->.<g i\n-0000b600: 643d 226e 6f64 6531 3722 2063 6c61 7373 d=\"node17\" class\n-0000b610: 3d22 6e6f 6465 223e 0a3c 7469 746c 653e =\"node\">.<title>\n-0000b620: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000b630: 6373 5f6d 6f64 756c 6172 7369 6d75 6c61 cs_modularsimula\n-0000b640: 746f 723c 2f74 6974 6c65 3e0a 3c67 2069 tor.\n-0000b6c0: 0a3c 656c 6c69 7073 6520 6669 6c6c 3d22 ..\n-0000b770: 6d6f 6475 6c61 7273 696d 756c 6174 6f72 modularsimulator\n-0000b780: 3c2f 7465 7874 3e0a 3c2f 613e 0a3c 2f67 ......module\n-0000b810: 5f73 7263 5f67 726f 6d61 6373 5f6d 6f64 _src_gromacs_mod\n-0000b820: 756c 6172 7369 6d75 6c61 746f 7226 2334 ularsimulator\n-0000b830: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0000b840: 5f67 726f 6d61 6373 5f67 6d78 6c69 623c _gromacs_gmxlib<\n-0000b850: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n-0000b860: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n-0000b870: 3d22 2362 6662 6662 6622 2064 3d22 4d31 =\"#bfbfbf\" d=\"M1\n-0000b880: 3533 302e 3537 2c2d 3438 332e 3034 4331 530.57,-483.04C1\n-0000b890: 3534 392e 3536 2c2d 3532 302e 3720 3136 549.56,-520.7 16\n-0000b8a0: 3032 2e31 352c 2d36 3336 2e34 3520 3135 02.15,-636.45 15\n-0000b8b0: 3836 2c2d 3733 342e 3434 2031 3537 362e 86,-734.44 1576.\n-0000b8c0: 3633 2c2d 3739 312e 3239 2031 3535 312e 63,-791.29 1551.\n-0000b8d0: 3135 2c2d 3835 342e 3535 2031 3533 362e 15,-854.55 1536.\n-0000b8e0: 3933 2c2d 3838 362e 3932 222f 3e0a 3c70 93,-886.92\"/>.<p\n-0000b8f0: 6f6c 7967 6f6e 2066 696c 6c3d 2223 6266 olygon fill=\"#bf\n-0000b900: 6266 6266 2220 7374 726f 6b65 3d22 2362 bfbf\" stroke=\"#b\n-0000b910: 6662 6662 6622 2070 6f69 6e74 733d 2231 fbfbf\" points=\"1\n-0000b920: 3533 332e 3632 2c2d 3838 352e 3734 2031 533.62,-885.74 1\n-0000b930: 3533 322e 3734 2c2d 3839 362e 3320 3135 532.74,-896.3 15\n-0000b940: 3430 2e30 322c 2d38 3838 2e36 2031 3533 40.02,-888.6 153\n-0000b950: 332e 3632 2c2d 3838 352e 3734 222f 3e0a 3.62,-885.74\"/>.\n-0000b960: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n-0000b970: 5f73 7263 5f67 726f 6d61 6373 5f70 756c _src_gromacs_pul\n-0000b980: 6c69 6e67 202d 2d3e 0a3c 6720 6964 3d22 ling -->.<g id=\"\n-0000b990: 6e6f 6465 3138 2220 636c 6173 733d 226e node18\" class=\"n\n-0000b9a0: 6f64 6522 3e0a 3c74 6974 6c65 3e6d 6f64 ode\">.<title>mod\n-0000b9b0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0000b9c0: 7075 6c6c 696e 673c 2f74 6974 6c65 3e0a pulling.\n-0000b9d0: 3c65 6c6c 6970 7365 2066 696c 6c3d 2223 .p\n-0000ba80: 756c 6c69 6e67 3c2f 7465 7874 3e0a 3c2f ulling...\n-0000bf00: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n-0000bf10: 7263 5f67 726f 6d61 6373 5f6d 6f64 756c rc_gromacs_modul\n-0000bf20: 6172 7369 6d75 6c61 746f 7226 2334 353b arsimulator-\n-0000bf30: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0000bf40: 726f 6d61 6373 5f66 696c 6569 6f3c 2f74 romacs_fileio</t\n-0000bf50: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-0000bf60: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-0000bf70: 2362 6662 6662 6622 2064 3d22 4d31 3437 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dularsimulator&#\n-0000c060: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0000c070: 635f 6772 6f6d 6163 735f 6d64 7479 7065 c_gromacs_mdtype\n-0000c080: 7320 2d2d 3e0a 3c67 2069 643d 2265 6467 s -->.<g id=\"edg\n-0000c090: 6535 3922 2063 6c61 7373 3d22 6564 6765 e59\" class=\"edge\n-0000c0a0: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n-0000c0b0: 5f73 7263 5f67 726f 6d61 6373 5f6d 6f64 _src_gromacs_mod\n-0000c0c0: 756c 6172 7369 6d75 6c61 746f 7226 2334 ularsimulator\n-0000c0d0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0000c0e0: 5f67 726f 6d61 6373 5f6d 6474 7970 6573 _gromacs_mdtypes\n-0000c0f0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 .....\n-0000c490: 3c67 2069 643d 2265 6467 6535 3822 2063 .module_src_g\n-0000c4c0: 726f 6d61 6373 5f6d 6f64 756c 6172 7369 romacs_modularsi\n-0000c4d0: 6d75 6c61 746f 7226 2334 353b 2667 743b mulator->\n-0000c4e0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000c4f0: 6373 5f6d 6472 756e 3c2f 7469 746c 653e cs_mdrun\n-0000c500: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......module_\n-0000c650: 7372 635f 6772 6f6d 6163 735f 6e62 6e78 src_gromacs_nbnx\n-0000c660: 6d3c 2f74 6974 6c65 3e0a 3c67 2069 643d m...<\n-0000c720: 7465 7874 2074 6578 742d 616e 6368 6f72 text text-anchor\n-0000c730: 3d22 6d69 6464 6c65 2220 783d 2231 3633 =\"middle\" x=\"163\n-0000c740: 3822 2079 3d22 2d39 3639 2e39 3922 2066 8\" y=\"-969.99\" f\n-0000c750: 6f6e 742d 6661 6d69 6c79 3d22 4672 6565 ont-family=\"Free\n-0000c760: 5361 6e73 2220 666f 6e74 2d73 697a 653d Sans\" font-size=\n-0000c770: 2231 302e 3030 223e 6e62 6e78 6d3c 2f74 \"10.00\">nbnxm...<\n-0000c790: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>..\n-0000ccb0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n-0000ccc0: 7263 5f67 726f 6d61 6373 5f6d 6f64 756c rc_gromacs_modul\n-0000ccd0: 6172 7369 6d75 6c61 746f 7226 2334 353b arsimulator-\n-0000cce0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0000ccf0: 726f 6d61 6373 5f6c 6973 7465 645f 666f romacs_listed_fo\n-0000cd00: 7263 6573 3c2f 7469 746c 653e 0a3c 7061 rces......modu\n-0000ced0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-0000cee0: 6f64 756c 6172 7369 6d75 6c61 746f 7226 odularsimulator&\n-0000cef0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0000cf00: 7263 5f67 726f 6d61 6373 5f72 616e 646f rc_gromacs_rando\n-0000cf10: 6d3c 2f74 6974 6c65 3e0a 3c70 6174 6820 m......m\n-0000d0f0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0000d100: 735f 6d6f 6475 6c61 7273 696d 756c 6174 s_modularsimulat\n-0000d110: 6f72 2623 3435 3b26 6774 3b6d 6f64 756c or->modul\n-0000d120: 655f 7372 635f 6772 6f6d 6163 735f 636f e_src_gromacs_co\n-0000d130: 6d70 6174 3c2f 7469 746c 653e 0a3c 7061 mpat...\n-0000d2b0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_\n-0000d330: 7372 635f 6772 6f6d 6163 735f 6d6f 6475 src_gromacs_modu\n-0000d340: 6c61 7273 696d 756c 6174 6f72 2623 3435 larsimulator-\n-0000d350: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0000d360: 6772 6f6d 6163 735f 636f 6d6d 616e 646c gromacs_commandl\n-0000d370: 696e 653c 2f74 6974 6c65 3e0a 3c70 6174 ine......module_src_grom\n-0000d520: 6163 735f 6d6f 6475 6c61 7273 696d 756c acs_modularsimul\n-0000d530: 6174 6f72 2623 3435 3b26 6774 3b6d 6f64 ator->mod\n-0000d540: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0000d550: 6770 755f 7574 696c 733c 2f74 6974 6c65 gpu_utils..\n-0000d760: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ..\n-0000d790: 0a3c 6720 6964 3d22 6e6f 6465 3436 2220 ..module_src_\n-0000d7c0: 6772 6f6d 6163 735f 7461 736b 6173 7369 gromacs_taskassi\n-0000d7d0: 676e 6d65 6e74 3c2f 7469 746c 653e 0a3c gnment.<\n-0000d7e0: 6720 6964 3d22 615f 6e6f 6465 3436 223e g id=\"a_node46\">\n-0000d7f0: 3c61 2078 6c69 6e6b 3a68 7265 663d 2267 .\n-0000d850: 3c65 6c6c 6970 7365 2066 696c 6c3d 2223 .t\n-0000d900: 6173 6b61 7373 6967 6e6d 656e 743c 2f74 askassignment...<\n-0000d920: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...m\n-0000d9a0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0000d9b0: 735f 6d6f 6475 6c61 7273 696d 756c 6174 s_modularsimulat\n-0000d9c0: 6f72 2623 3435 3b26 6774 3b6d 6f64 756c or->modul\n-0000d9d0: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n-0000d9e0: 736b 6173 7369 676e 6d65 6e74 3c2f 7469 skassignment</ti\n-0000d9f0: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n-0000da00: 226e 6f6e 6522 2073 7472 6f6b 653d 2272 \"none\" stroke=\"r\n-0000da10: 6564 2220 643d 224d 3135 3533 2e37 2c2d ed\" d=\"M1553.7,-\n-0000da20: 3435 372e 3543 3135 3830 2e34 392c 2d34 457.5C1580.49,-4\n-0000da30: 3437 2e35 3620 3136 3230 2e30 352c 2d34 47.56 1620.05,-4\n-0000da40: 3332 2e38 3820 3136 3439 2e33 312c 2d34 32.88 1649.31,-4\n-0000da50: 3232 2e30 3222 2f3e 0a3c 706f 6c79 676f 22.02\"/>.<polygo\n-0000da60: 6e20 6669 6c6c 3d22 7265 6422 2073 7472 n fill=\"red\" str\n-0000da70: 6f6b 653d 2272 6564 2220 706f 696e 7473 oke=\"red\" points\n-0000da80: 3d22 3136 3530 2e36 342c 2d34 3235 2e32 =\"1650.64,-425.2\n-0000da90: 3620 3136 3538 2e38 2c2d 3431 382e 3439 6 1658.8,-418.49\n-0000daa0: 2031 3634 382e 322c 2d34 3138 2e36 3920 1648.2,-418.69 \n-0000dab0: 3136 3530 2e36 342c 2d34 3235 2e32 3622 1650.64,-425.26\"\n-0000dac0: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />.</g>.<!-- mod\n-0000dad0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0000dae0: 6d6f 6475 6c61 7273 696d 756c 6174 6f72 modularsimulator\n-0000daf0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-0000db00: 7372 635f 6772 6f6d 6163 735f 6d64 7275 src_gromacs_mdru\n-0000db10: 6e75 7469 6c69 7479 202d 2d3e 0a3c 6720 nutility -->.<g \n-0000db20: 6964 3d22 6564 6765 3638 2220 636c 6173 id=\"edge68\" clas\n-0000db30: 733d 2265 6467 6522 3e0a 3c74 6974 6c65 s=\"edge\">.<title\n-0000db40: 3e6d 6f64 756c 655f 7372 635f 6772 6f6d >module_src_grom\n-0000db50: 6163 735f 6d6f 6475 6c61 7273 696d 756c acs_modularsimul\n-0000db60: 6174 6f72 2623 3435 3b26 6774 3b6d 6f64 ator->mod\n-0000db70: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0000db80: 6d64 7275 6e75 7469 6c69 7479 3c2f 7469 mdrunutility</ti\n-0000db90: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n-0000dba0: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n-0000dbb0: 3238 3266 6363 2220 7374 726f 6b65 2d64 282fcc\" stroke-d\n-0000dbc0: 6173 6861 7272 6179 3d22 352c 3222 2064 asharray=\"5,2\" d\n-0000dbd0: 3d22 4d31 3533 362e 3636 2c2d 3438 3343 =\"M1536.66,-483C\n-0000dbe0: 3135 3535 2e34 2c2d 3530 312e 3420 3135 1555.4,-501.4 15\n-0000dbf0: 3839 2e37 332c 2d35 3334 2e38 3220 3136 89.73,-534.82 16\n-0000dc00: 3033 2c2d 3534 352e 3833 2031 3632 342e 03,-545.83 1624.\n-0000dc10: 3037 2c2d 3536 332e 3332 2031 3633 362e 07,-563.32 1636.\n-0000dc20: 3237 2c2d 3536 302e 3135 2031 3635 332c 27,-560.15 1653,\n-0000dc30: 2d35 3831 2e38 3320 3136 3635 2e30 332c -581.83 1665.03,\n-0000dc40: 2d35 3937 2e34 3220 3136 3732 2e35 392c -597.42 1672.59,\n-0000dc50: 2d36 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2265 edge77\" class=\"e\n-0000dd40: 6467 6522 3e0a 3c74 6974 6c65 3e6d 6f64 dge\">.<title>mod\n-0000dd50: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0000dd60: 7075 6c6c 696e 6726 2334 353b 2667 743b pulling->\n-0000dd70: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000dd80: 6373 5f67 6d78 6c69 623c 2f74 6974 6c65 cs_gmxlib</title\n-0000dd90: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n-0000dda0: 6e65 2220 7374 726f 6b65 3d22 2362 6662 ne\" stroke=\"#bfb\n-0000ddb0: 6662 6622 2064 3d22 4d31 3139 372e 3738 fbf\" d=\"M1197.78\n-0000ddc0: 2c2d 3136 352e 3032 4331 3039 362e 3334 ,-165.02C1096.34\n-0000ddd0: 2c2d 3230 372e 3738 2036 3632 2e39 322c ,-207.78 662.92,\n-0000dde0: 2d33 3935 2e39 3920 3539 322c 2d35 3138 -395.99 592,-518\n-0000ddf0: 2e39 3620 3537 312e 3937 2c2d 3535 332e .96 571.97,-553.\n-0000de00: 3638 2035 3833 2e32 372c 2d35 3732 2e37 68 583.27,-572.7\n-0000de10: 3520 3630 312c 2d36 3038 2e37 2036 3535 5 601,-608.7 655\n-0000de20: 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3637 2c2d 3735 332e 3920 1182.67,-753.9 \n-0000e0e0: 3133 3036 2e31 322c 2d37 3730 2e35 3220 1306.12,-770.52 \n-0000e0f0: 3133 3636 2e37 312c 2d37 3738 2e32 3522 1366.71,-778.25\"\n-0000e100: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n-0000e110: 3d22 2362 6662 6662 6622 2073 7472 6f6b =\"#bfbfbf\" strok\n-0000e120: 653d 2223 6266 6266 6266 2220 706f 696e e=\"#bfbfbf\" poin\n-0000e130: 7473 3d22 3133 3636 2e35 362c 2d37 3831 ts=\"1366.56,-781\n-0000e140: 2e37 3620 3133 3736 2e39 322c 2d37 3739 .76 1376.92,-779\n-0000e150: 2e35 3420 3133 3637 2e34 342c 2d37 3734 .54 1367.44,-774\n-0000e160: 2e38 3120 3133 3636 2e35 362c 2d37 3831 .81 1366.56,-781\n-0000e170: 2e37 3622 2f3e 0a3c 2f67 3e0a 3c21 2d2d .76\"/>.</g>.<!--\n-0000e180: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n-0000e190: 6163 735f 7075 6c6c 696e 6726 2334 353b acs_pulling-\n-0000e1a0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0000e1b0: 726f 6d61 6373 5f66 696c 6569 6f20 2d2d romacs_fileio --\n-0000e1c0: 3e0a 3c67 2069 643d 2265 6467 6537 3322 >.<g id=\"edge73\"\n-0000e1d0: 2063 6c61 7373 3d22 6564 6765 223e 0a3c class=\"edge\">.<\n-0000e1e0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-0000e1f0: 5f67 726f 6d61 6373 5f70 756c 6c69 6e67 _gromacs_pulling\n-0000e200: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-0000e210: 7372 635f 6772 6f6d 6163 735f 6669 6c65 src_gromacs_file\n-0000e220: 696f 3c2f 7469 746c 653e 0a3c 7061 7468 io.\n-0000e2c0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ..\n-0000e330: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...\n-0000e3a0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000e3b0: 6373 5f70 756c 6c69 6e67 2623 3435 3b26 cs_pulling-&\n-0000e3c0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-0000e3d0: 6f6d 6163 735f 6d64 7479 7065 733c 2f74 omacs_mdtypes</t\n-0000e3e0: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-0000e3f0: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" 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2d38 3034 2e30 3520 3935 332e .65,-804.05 953.\n-0000e4f0: 3232 2c2d 3735 362e 3235 2031 3239 342c 22,-756.25 1294,\n-0000e500: 2d37 3937 2e33 3120 3134 3332 2e31 322c -797.31 1432.12,\n-0000e510: 2d38 3133 2e39 3520 3135 3935 2e36 392c -813.95 1595.69,\n-0000e520: 2d38 3332 2e31 3820 3136 3733 2e34 392c -832.18 1673.49,\n-0000e530: 2d38 3430 2e37 3522 2f3e 0a3c 706f 6c79 -840.75\"/>.<poly\n-0000e540: 676f 6e20 6669 6c6c 3d22 2362 6662 6662 gon fill=\"#bfbfb\n-0000e550: 6622 2073 7472 6f6b 653d 2223 6266 6266 f\" stroke=\"#bfbf\n-0000e560: 6266 2220 706f 696e 7473 3d22 3136 3733 bf\" points=\"1673\n-0000e570: 2e31 322c 2d38 3434 2e32 3320 3136 3833 .12,-844.23 1683\n-0000e580: 2e34 342c 2d38 3431 2e38 3520 3136 3733 .44,-841.85 1673\n-0000e590: 2e38 382c 2d38 3337 2e32 3820 3136 3733 .88,-837.28 1673\n-0000e5a0: 2e31 322c 2d38 3434 2e32 3322 2f3e 0a3c .12,-844.23\"/>.<\n-0000e5b0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.<!-- module_\n-0000e5c0: 7372 635f 6772 6f6d 6163 735f 7075 6c6c src_gromacs_pull\n-0000e5d0: 696e 6726 2334 353b 2667 743b 6d6f 6475 ing->modu\n-0000e5e0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f64 le_src_gromacs_d\n-0000e5f0: 6f6d 6465 6320 2d2d 3e0a 3c67 2069 643d omdec -->.<g id=\n-0000e600: 2265 6467 6537 3622 2063 6c61 7373 3d22 \"edge76\" class=\"\n-0000e610: 6564 6765 223e 0a3c 7469 746c 653e 6d6f edge\">.<title>mo\n-0000e620: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0000e630: 5f70 756c 6c69 6e67 2623 3435 3b26 6774 _pulling->\n-0000e640: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-0000e650: 6163 735f 646f 6d64 6563 3c2f 7469 746c acs_domdec</titl\n-0000e660: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n-0000e670: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n-0000e680: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n-0000e690: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n-0000e6a0: 4d31 3234 322e 3638 2c2d 3136 342e 3037 M1242.68,-164.07\n-0000e6b0: 4331 3234 382e 3331 2c2d 3136 352e 3735 C1248.31,-165.75\n-0000e6c0: 2031 3235 342e 3333 2c2d 3136 372e 3338 1254.33,-167.38\n-0000e6d0: 2031 3236 302c 2d31 3638 2e36 3120 3133 1260,-168.61 13\n-0000e6e0: 3738 2e33 312c 2d31 3934 2e32 3620 3134 78.31,-194.26 14\n-0000e6f0: 3130 2e32 362c 2d31 3836 2e37 3920 3135 10.26,-186.79 15\n-0000e700: 3330 2c2d 3230 342e 3631 2031 3638 332e 30,-204.61 1683.\n-0000e710: 372c 2d32 3237 2e34 3920 3138 3635 2e37 7,-227.49 1865.7\n-0000e720: 332c 2d32 3538 2e36 3320 3139 3436 2e31 3,-258.63 1946.1\n-0000e730: 392c 2d32 3732 2e36 222f 3e0a 3c70 6f6c 9,-272.6\"/>.<pol\n-0000e740: 7967 6f6e 2066 696c 6c3d 2223 3238 3266 ygon fill=\"#282f\n-0000e750: 6363 2220 7374 726f 6b65 3d22 2332 3832 cc\" stroke=\"#282\n-0000e760: 6663 6322 2070 6f69 6e74 733d 2231 3934 fcc\" points=\"194\n-0000e770: 352e 3935 2c2d 3237 362e 3131 2031 3935 5.95,-276.11 195\n-0000e780: 362e 342c 2d32 3734 2e33 3820 3139 3437 6.4,-274.38 1947\n-0000e790: 2e31 352c 2d32 3639 2e32 3220 3139 3435 .15,-269.22 1945\n-0000e7a0: 2e39 352c 2d32 3736 2e31 3122 2f3e 0a3c .95,-276.11\"/>.<\n-0000e7b0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.<!-- module_\n-0000e7c0: 7372 635f 6772 6f6d 6163 735f 7075 6c6c src_gromacs_pull\n-0000e7d0: 696e 6726 2334 353b 2667 743b 6d6f 6475 ing->modu\n-0000e7e0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f63 le_src_gromacs_c\n-0000e7f0: 6f6d 6d61 6e64 6c69 6e65 202d 2d3e 0a3c ommandline -->.<\n-0000e800: 6720 6964 3d22 6564 6765 3732 2220 636c g id=\"edge72\" cl\n-0000e810: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.<tit\n-0000e820: 6c65 3e6d 6f64 756c 655f 7372 635f 6772 le>module_src_gr\n-0000e830: 6f6d 6163 735f 7075 6c6c 696e 6726 2334 omacs_pulling\n-0000e840: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0000e850: 5f67 726f 6d61 6373 5f63 6f6d 6d61 6e64 _gromacs_command\n-0000e860: 6c69 6e65 3c2f 7469 746c 653e 0a3c 7061 line......modul\n-0000ea00: 655f 7372 635f 6772 6f6d 6163 735f 7075 e_src_gromacs_pu\n-0000ea10: 6c6c 696e 6726 2334 353b 2667 743b 6d6f lling->mo\n-0000ea20: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0000ea30: 5f6d 6472 756e 7574 696c 6974 793c 2f74 _mdrunutility</t\n-0000ea40: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-0000ea50: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-0000ea60: 2332 3832 6663 6322 2073 7472 6f6b 652d #282fcc\" stroke-\n-0000ea70: 6461 7368 6172 7261 793d 2235 2c32 2220 dasharray=\"5,2\" \n-0000ea80: 643d 224d 3132 3234 2e35 2c2d 3136 382e d=\"M1224.5,-168.\n-0000ea90: 3743 3132 3435 2e32 312c 2d32 3134 2e38 7C1245.21,-214.8\n-0000eaa0: 3320 3133 3232 2e35 312c 2d33 3738 2e30 3 1322.51,-378.0\n-0000eab0: 3120 3134 3234 2c2d 3438 322e 3936 2031 1 1424,-482.96 1\n-0000eac0: 3439 342e 3033 2c2d 3535 352e 3338 2031 494.03,-555.38 1\n-0000ead0: 3539 382e 3836 2c2d 3631 342e 3638 2031 598.86,-614.68 1\n-0000eae0: 3635 302e 3639 2c2d 3634 312e 3537 222f 650.69,-641.57\"/\n-0000eaf0: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n-0000eb00: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n-0000eb10: 3d22 2332 3832 6663 6322 2070 6f69 6e74 =\"#282fcc\" point\n-0000eb20: 733d 2231 3634 392e 3233 2c2d 3634 342e s=\"1649.23,-644.\n-0000eb30: 3736 2031 3635 392e 3733 2c2d 3634 362e 76 1659.73,-646.\n-0000eb40: 3231 2031 3635 322e 3433 2c2d 3633 382e 21 1652.43,-638.\n-0000eb50: 3533 2031 3634 392e 3233 2c2d 3634 342e 53 1649.23,-644.\n-0000eb60: 3736 222f 3e0a 3c2f 673e 0a3c 212d 2d20 76\"/>.</g>.<!-- \n-0000eb70: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000eb80: 6373 5f74 696d 696e 6720 2d2d 3e0a 3c67 cs_timing -->.<g\n-0000eb90: 2069 643d 226e 6f64 6532 3022 2063 6c61 id=\"node20\" cla\n-0000eba0: 7373 3d22 6e6f 6465 223e 0a3c 7469 746c ss=\"node\">.<titl\n-0000ebb0: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n-0000ebc0: 6d61 6373 5f74 696d 696e 673c 2f74 6974 macs_timing</tit\n-0000ebd0: 6c65 3e0a 3c65 6c6c 6970 7365 2066 696c le>.<ellipse 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655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0000ecd0: 6d64 7479 7065 7320 2d2d 3e0a 3c67 2069 mdtypes -->.<g i\n-0000ece0: 643d 2265 6467 6537 3922 2063 6c61 7373 d=\"edge79\" class\n-0000ecf0: 3d22 6564 6765 223e 0a3c 7469 746c 653e =\"edge\">.<title>\n-0000ed00: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000ed10: 6373 5f74 696d 696e 6726 2334 353b 2667 cs_timing-&g\n-0000ed20: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-0000ed30: 6d61 6373 5f6d 6474 7970 6573 3c2f 7469 macs_mdtypes</ti\n-0000ed40: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n-0000ed50: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n-0000ed60: 6266 6266 6266 2220 643d 224d 3136 3933 bfbfbf\" d=\"M1693\n-0000ed70: 2e34 382c 2d38 3936 2e33 4331 3639 372e .48,-896.3C1697.\n-0000ed80: 362c 2d38 3838 2e34 3620 3137 3033 2e30 6,-888.46 1703.0\n-0000ed90: 342c 2d38 3738 2e31 2031 3730 372e 3834 4,-878.1 1707.84\n-0000eda0: 2c2d 3836 382e 3937 222f 3e0a 3c70 6f6c ,-868.97\"/>.<pol\n-0000edb0: 7967 6f6e 2066 696c 6c3d 2223 6266 6266 ygon fill=\"#bfbf\n-0000edc0: 6266 2220 7374 726f 6b65 3d22 2362 6662 bf\" stroke=\"#bfb\n-0000edd0: 6662 6622 2070 6f69 6e74 733d 2231 3731 fbf\" points=\"171\n-0000ede0: 302e 3938 2c2d 3837 302e 3533 2031 3731 0.98,-870.53 171\n-0000edf0: 322e 3533 2c2d 3836 302e 3035 2031 3730 2.53,-860.05 170\n-0000ee00: 342e 3738 2c2d 3836 372e 3237 2031 3731 4.78,-867.27 171\n-0000ee10: 302e 3938 2c2d 3837 302e 3533 222f 3e0a 0.98,-870.53\"/>.\n-0000ee20: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n-0000ee30: 5f73 7263 5f67 726f 6d61 6373 5f6d 646c _src_gromacs_mdl\n-0000ee40: 6962 2623 3435 3b26 6774 3b6d 6f64 756c ib->modul\n-0000ee50: 655f 7372 635f 6772 6f6d 6163 735f 696d e_src_gromacs_im\n-0000ee60: 6420 2d2d 3e0a 3c67 2069 643d 2265 6467 d -->.<g id=\"edg\n-0000ee70: 6538 3822 2063 6c61 7373 3d22 6564 6765 e88\" class=\"edge\n-0000ee80: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n-0000ee90: 5f73 7263 5f67 726f 6d61 6373 5f6d 646c _src_gromacs_mdl\n-0000eea0: 6962 2623 3435 3b26 6774 3b6d 6f64 756c ib->modul\n-0000eeb0: 655f 7372 635f 6772 6f6d 6163 735f 696d e_src_gromacs_im\n-0000eec0: 643c 2f74 6974 6c65 3e0a 3c70 6174 6820 d...\n-0000efc0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ..\n-0000f010: 3c67 2069 643d 2265 6467 6538 3622 2063 .module_src_g\n-0000f040: 726f 6d61 6373 5f6d 646c 6962 2623 3435 romacs_mdlib-\n-0000f050: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0000f060: 6772 6f6d 6163 735f 6573 7365 6e74 6961 gromacs_essentia\n-0000f070: 6c64 796e 616d 6963 733c 2f74 6974 6c65 ldynamics....\n-0000f200: 3c21 2d2d 206d 6f64 756c 655f 7372 635f .\n-0000f260: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n-0000f270: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n-0000f280: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-0000f290: 7372 635f 6772 6f6d 6163 735f 676d 786c src_gromacs_gmxl\n-0000f2a0: 6962 3c2f 7469 746c 653e 0a3c 7061 7468 ib......m\n-0000f3f0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0000f400: 735f 6d64 6c69 6226 2334 353b 2667 743b s_mdlib->\n-0000f410: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000f420: 6373 5f74 6162 6c65 733c 2f74 6974 6c65 cs_tables</title\n-0000f430: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n-0000f440: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n-0000f450: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n-0000f460: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n-0000f470: 3133 3736 2e31 332c 2d37 3831 2e34 3343 1376.13,-781.43C\n-0000f480: 3132 3731 2e36 342c 2d37 3735 2e38 3720 1271.64,-775.87 \n-0000f490: 3930 362e 3731 2c2d 3735 352e 3135 2038 906.71,-755.15 8\n-0000f4a0: 3539 2c2d 3733 342e 3434 2038 3432 2e35 59,-734.44 842.5\n-0000f4b0: 382c 2d37 3237 2e33 3120 3834 352e 3139 8,-727.31 845.19\n-0000f4c0: 2c2d 3731 352e 3220 3832 392c 2d37 3037 ,-715.2 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src_gromacs_traj\n-0000f6a0: 6563 746f 7279 202d 2d3e 0a3c 6720 6964 ectory -->.<g id\n-0000f6b0: 3d22 6564 6765 3938 2220 636c 6173 733d =\"edge98\" class=\n-0000f6c0: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n-0000f6d0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0000f6e0: 735f 6d64 6c69 6226 2334 353b 2667 743b s_mdlib->\n-0000f6f0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0000f700: 6373 5f74 7261 6a65 6374 6f72 793c 2f74 cs_trajectory</t\n-0000f710: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-0000f720: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-0000f730: 2362 6662 6662 6622 2064 3d22 4d31 3337 #bfbfbf\" d=\"M137\n-0000f740: 352e 3934 2c2d 3738 322e 3039 4331 3239 5.94,-782.09C129\n-0000f750: 302e 342c 2d37 3739 2e33 3620 3130 3235 0.4,-779.36 1025\n-0000f760: 2e35 332c 2d37 3638 2e35 3520 3830 392c .53,-768.55 809,\n-0000f770: 2d37 3334 2e34 3420 3737 382e 3839 2c2d -734.44 778.89,-\n-0000f780: 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3935 302e 3932 2031 513.04,-950.92 1\n-000101f0: 3536 312e 3336 2c2d 3936 322e 3737 2031 561.36,-962.77 1\n-00010200: 3539 352e 3936 2c2d 3936 372e 3822 2f3e 595.96,-967.8\"/>\n-00010210: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....module\n-000102f0: 5f73 7263 5f67 726f 6d61 6373 5f6d 646c _src_gromacs_mdl\n-00010300: 6962 2623 3435 3b26 6774 3b6d 6f64 756c ib->modul\n-00010310: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-00010320: 7370 616e 3c2f 7469 746c 653e 0a3c 7061 span......module\n-000105a0: 5f73 7263 5f67 726f 6d61 6373 5f6d 646c _src_gromacs_mdl\n-000105b0: 6962 2623 3435 3b26 6774 3b6d 6f64 756c ib->modul\n-000105c0: 655f 7372 635f 6772 6f6d 6163 735f 6577 e_src_gromacs_ew\n-000105d0: 616c 643c 2f74 6974 6c65 3e0a 3c70 6174 ald....\n-00010760: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..m\n-000107d0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-000107e0: 735f 6d64 6c69 6226 2334 353b 2667 743b s_mdlib->\n-000107f0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00010800: 6373 5f6c 6973 7465 645f 666f 7263 6573 cs_listed_forces\n-00010810: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 .....<\n-00010a90: 6720 6964 3d22 6564 6765 3936 2220 636c g id=\"edge96\" cl\n-00010aa0: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.module_src_gr\n-00010ac0: 6f6d 6163 735f 6d64 6c69 6226 2334 353b omacs_mdlib-\n-00010ad0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00010ae0: 726f 6d61 6373 5f72 616e 646f 6d3c 2f74 romacs_random....\n-00010c70: 3c21 2d2d 206d 6f64 756c 655f 7372 635f .\n-00010cd0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n-00010ce0: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n-00010cf0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-00010d00: 7372 635f 6772 6f6d 6163 735f 636f 6d70 src_gromacs_comp\n-00010d10: 6174 3c2f 7469 746c 653e 0a3c 7061 7468 at.....\n-00010f40: 3c67 2069 643d 2265 6467 6539 3422 2063 .module_src_g\n-00010f70: 726f 6d61 6373 5f6d 646c 6962 2623 3435 romacs_mdlib-\n-00010f80: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00010f90: 6772 6f6d 6163 735f 636f 6d6d 616e 646c gromacs_commandl\n-00010fa0: 696e 653c 2f74 6974 6c65 3e0a 3c70 6174 ine.....<\n-000112d0: 6720 6964 3d22 6564 6765 3930 2220 636c g id=\"edge90\" cl\n-000112e0: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.module_src_gr\n-00011300: 6f6d 6163 735f 6d64 6c69 6226 2334 353b omacs_mdlib-\n-00011310: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00011320: 726f 6d61 6373 5f6d 6472 756e 7574 696c romacs_mdrunutil\n-00011330: 6974 793c 2f74 6974 6c65 3e0a 3c70 6174 ity....\n-00011490: 0a3c 6720 6964 3d22 6e6f 6465 3439 2220 ..module_src_\n-000114c0: 6772 6f6d 6163 735f 6170 706c 6965 645f gromacs_applied_\n-000114d0: 666f 7263 6573 5f61 7768 3c2f 7469 746c forces_awh...awh.\n-000115f0: 3c2f 613e 0a3c 2f67 3e0a 3c2f 673e 0a3c ...<\n-00011600: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-00011610: 726f 6d61 6373 5f6d 646c 6962 2623 3435 romacs_mdlib-\n-00011620: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00011630: 6772 6f6d 6163 735f 6170 706c 6965 645f gromacs_applied_\n-00011640: 666f 7263 6573 5f61 7768 202d 2d3e 0a3c forces_awh -->.<\n-00011650: 6720 6964 3d22 6564 6765 3834 2220 636c g id=\"edge84\" cl\n-00011660: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.module_src_gr\n-00011680: 6f6d 6163 735f 6d64 6c69 6226 2334 353b omacs_mdlib-\n-00011690: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-000116a0: 726f 6d61 6373 5f61 7070 6c69 6564 5f66 romacs_applied_f\n-000116b0: 6f72 6365 735f 6177 683c 2f74 6974 6c65 orces_awh......modu\n-00011930: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-00011940: 646c 6962 2623 3435 3b26 6774 3b6d 6f64 dlib->mod\n-00011950: 756c 655f 7372 635f 7465 7374 7574 696c ule_src_testutil\n-00011960: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s.\n-00011a20: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .\n-00011a90: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....\n-00011b00: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00011b10: 6373 5f66 696c 6569 6f26 2334 353b 2667 cs_fileio-&g\n-00011b20: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-00011b30: 6d61 6373 5f67 6d78 6c69 623c 2f74 6974 macs_gmxlib</tit\n-00011b40: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n-00011b50: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n-00011b60: 6662 6662 6622 2064 3d22 4d31 3035 382e fbfbf\" d=\"M1058.\n-00011b70: 3237 2c2d 3533 342e 3336 4339 3638 2e31 27,-534.36C968.1\n-00011b80: 2c2d 3533 372e 3837 2036 3739 2e32 2c2d ,-537.87 679.2,-\n-00011b90: 3535 312e 3432 2036 3532 2c2d 3538 312e 551.42 652,-581.\n-00011ba0: 3833 2036 3434 2e30 342c 2d35 3930 2e37 83 644.04,-590.7\n-00011bb0: 3320 3634 382e 3636 2c2d 3539 372e 3233 3 648.66,-597.23\n-00011bc0: 2036 3532 2c2d 3630 382e 3720 3636 312e 652,-608.7 661.\n-00011bd0: 3236 2c2d 3634 302e 3520 3637 302e 3034 26,-640.5 670.04\n-00011be0: 2c2d 3634 362e 3738 2036 3932 2c2d 3637 ,-646.78 692,-67\n-00011bf0: 312e 3537 2037 3637 2e31 322c 2d37 3536 1.57 767.12,-756\n-00011c00: 2e33 3620 3830 332e 3031 2c2d 3735 392e .36 803.01,-759.\n-00011c10: 3536 2038 3839 2c2d 3833 332e 3331 2039 56 889,-833.31 9\n-00011c20: 3032 2e35 392c 2d38 3434 2e39 3620 3930 02.59,-844.96 90\n-00011c30: 322e 3535 2c2d 3835 332e 3133 2039 3139 2.55,-853.13 919\n-00011c40: 2c2d 3836 302e 3138 2031 3032 312e 3135 ,-860.18 1021.15\n-00011c50: 2c2d 3930 332e 3937 2031 3336 342e 3538 ,-903.97 1364.58\n-00011c60: 2c2d 3930 382e 3531 2031 3438 342e 3931 ,-908.51 1484.91\n-00011c70: 2c2d 3930 382e 3733 222f 3e0a 3c70 6f6c ,-908.73\"/>.<pol\n-00011c80: 7967 6f6e 2066 696c 6c3d 2223 6266 6266 ygon fill=\"#bfbf\n-00011c90: 6266 2220 7374 726f 6b65 3d22 2362 6662 bf\" stroke=\"#bfb\n-00011ca0: 6662 6622 2070 6f69 6e74 733d 2231 3438 fbf\" points=\"148\n-00011cb0: 352e 3138 2c2d 3931 322e 3233 2031 3439 5.18,-912.23 149\n-00011cc0: 352e 3139 2c2d 3930 382e 3734 2031 3438 5.19,-908.74 148\n-00011cd0: 352e 3139 2c2d 3930 352e 3233 2031 3438 5.19,-905.23 148\n-00011ce0: 352e 3138 2c2d 3931 322e 3233 222f 3e0a 5.18,-912.23\"/>.\n-00011cf0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n-00011d00: 5f73 7263 5f67 726f 6d61 6373 5f66 696c _src_gromacs_fil\n-00011d10: 6569 6f26 2334 353b 2667 743b 6d6f 6475 eio->modu\n-00011d20: 6c65 5f73 7263 5f67 726f 6d61 6373 5f74 le_src_gromacs_t\n-00011d30: 7261 6a65 6374 6f72 7920 2d2d 3e0a 3c67 rajectory -->.<g\n-00011d40: 2069 643d 2265 6467 6531 3033 2220 636c id=\"edge103\" cl\n-00011d50: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.<tit\n-00011d60: 6c65 3e6d 6f64 756c 655f 7372 635f 6772 le>module_src_gr\n-00011d70: 6f6d 6163 735f 6669 6c65 696f 2623 3435 omacs_fileio-\n-00011d80: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00011d90: 6772 6f6d 6163 735f 7472 616a 6563 746f gromacs_trajecto\n-00011da0: 7279 3c2f 7469 746c 653e 0a3c 7061 7468 ry....<\n-00011f20: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-00011f30: 726f 6d61 6373 5f66 696c 6569 6f26 2334 romacs_fileio\n-00011f40: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-00011f50: 5f67 726f 6d61 6373 5f6d 6f64 756c 6172 _gromacs_modular\n-00011f60: 7369 6d75 6c61 746f 7220 2d2d 3e0a 3c67 simulator -->..module_src_gr\n-00011fa0: 6f6d 6163 735f 6669 6c65 696f 2623 3435 omacs_fileio-\n-00011fb0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00011fc0: 6772 6f6d 6163 735f 6d6f 6475 6c61 7273 gromacs_modulars\n-00011fd0: 696d 756c 6174 6f72 3c2f 7469 746c 653e imulator\n-00011fe0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......module_src_gro\n-00012130: 6d61 6373 5f66 696c 6569 6f26 2334 353b macs_fileio-\n-00012140: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00012150: 726f 6d61 6373 5f6d 6474 7970 6573 3c2f romacs_mdtypes...\n-000122c0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...m\n-00012330: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00012340: 735f 6669 6c65 696f 2623 3435 3b26 6774 s_fileio->\n-00012350: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-00012360: 6163 735f 6d64 7370 616e 3c2f 7469 746c acs_mdspan</titl\n-00012370: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n-00012380: 6f6e 6522 2073 7472 6f6b 653d 2272 6564 one\" stroke=\"red\n-00012390: 2220 643d 224d 3130 3539 2e34 312c 2d35 \" d=\"M1059.41,-5\n-000123a0: 3237 2e39 3643 3937 392e 3034 2c2d 3531 27.96C979.04,-51\n-000123b0: 362e 3435 2037 3337 2c2d 3437 362e 3131 6.45 737,-476.11\n-000123c0: 2037 3337 2c2d 3430 372e 3636 2037 3337 737,-407.66 737\n-000123d0: 2c2d 3430 372e 3636 2037 3337 2c2d 3430 ,-407.66 737,-40\n-000123e0: 372e 3636 2037 3337 2c2d 3237 392e 3932 7.66 737,-279.92\n-000123f0: 2037 3337 2c2d 3231 352e 3733 2037 3236 737,-215.73 726\n-00012400: 2e38 312c 2d31 3937 2e34 3920 3639 352c .81,-197.49 695,\n-00012410: 2d31 3431 2e37 3420 3637 332e 3632 2c2d -141.74 673.62,-\n-00012420: 3130 342e 3237 2036 3337 2e35 372c 2d36 104.27 637.57,-6\n-00012430: 382e 3937 2036 3134 2e35 352c 2d34 382e 8.97 614.55,-48.\n-00012440: 3534 222f 3e0a 3c70 6f6c 7967 6f6e 2066 54\"/>.<polygon f\n-00012450: 696c 6c3d 2272 6564 2220 7374 726f 6b65 ill=\"red\" stroke\n-00012460: 3d22 7265 6422 2070 6f69 6e74 733d 2236 =\"red\" points=\"6\n-00012470: 3136 2e38 332c 2d34 352e 3839 2036 3037 16.83,-45.89 607\n-00012480: 2c2d 3431 2e39 3620 3631 322e 3233 2c2d ,-41.96 612.23,-\n-00012490: 3531 2e31 3620 3631 362e 3833 2c2d 3435 51.16 616.83,-45\n-000124a0: 2e38 3922 2f3e 0a3c 2f67 3e0a 3c21 2d2d .89\"/>.</g>.<!--\n-000124b0: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n-000124c0: 6163 735f 6669 6c65 696f 2623 3435 3b26 acs_fileio-&\n-000124d0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-000124e0: 6f6d 6163 735f 636f 6d70 6174 202d 2d3e omacs_compat -->\n-000124f0: 0a3c 6720 6964 3d22 6564 6765 3130 3722 .<g id=\"edge107\"\n-00012500: 2063 6c61 7373 3d22 6564 6765 223e 0a3c class=\"edge\">.<\n-00012510: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-00012520: 5f67 726f 6d61 6373 5f66 696c 6569 6f26 _gromacs_fileio&\n-00012530: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-00012540: 7263 5f67 726f 6d61 6373 5f63 6f6d 7061 rc_gromacs_compa\n-00012550: 743c 2f74 6974 6c65 3e0a 3c70 6174 6820 t...\n-000126a0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_grom\n-00012720: 6163 735f 6669 6c65 696f 2623 3435 3b26 acs_fileio-&\n-00012730: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-00012740: 6f6d 6163 735f 6d64 7275 6e75 7469 6c69 omacs_mdrunutili\n-00012750: 7479 3c2f 7469 746c 653e 0a3c 7061 7468 ty......module_src_gr\n-00012930: 6f6d 6163 735f 6669 6c65 696f 2623 3435 omacs_fileio-\n-00012940: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00012950: 6772 6f6d 6163 735f 6170 706c 6965 645f gromacs_applied_\n-00012960: 666f 7263 6573 5f61 7768 3c2f 7469 746c forces_awh.\n-00012a60: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .\n-00012ad0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....modul\n-00012b40: 655f 7372 635f 6772 6f6d 6163 735f 6669 e_src_gromacs_fi\n-00012b50: 6c65 696f 2623 3435 3b26 6774 3b6d 6f64 leio->mod\n-00012b60: 756c 655f 7372 635f 7465 7374 7574 696c ule_src_testutil\n-00012b70: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s...<\n-00012cc0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modu\n-00012d10: 6c65 5f73 7263 5f67 726f 6d61 6373 5f70 le_src_gromacs_p\n-00012d20: 6263 7574 696c 3c2f 7469 746c 653e 0a3c bcutil.<\n-00012d30: 656c 6c69 7073 6520 6669 6c6c 3d22 2362 ellipse fill=\"#b\n-00012d40: 6662 6662 6622 2073 7472 6f6b 653d 2262 fbfbf\" stroke=\"b\n-00012d50: 6c61 636b 2220 6378 3d22 3139 3333 2220 lack\" cx=\"1933\" \n-00012d60: 6379 3d22 2d31 3039 382e 3233 2220 7278 cy=\"-1098.23\" rx\n-00012d70: 3d22 3331 2e36 3422 2072 793d 2231 332e =\"31.64\" ry=\"13.\n-00012d80: 3337 222f 3e0a 3c74 6578 7420 7465 7874 37\"/>.\n-00012de0: 7062 6375 7469 6c3c 2f74 6578 743e 0a3c pbcutil.<\n-00012df0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_gro\n-00012e70: 6d61 6373 5f70 6263 7574 696c 2623 3435 macs_pbcutil-\n-00012e80: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00012e90: 6772 6f6d 6163 735f 6770 755f 7574 696c gromacs_gpu_util\n-00012ea0: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s...\n-00012f90: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...m\n-00013000: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00013010: 735f 6d64 7479 7065 7326 2334 353b 2667 s_mdtypes-&g\n-00013020: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-00013030: 6d61 6373 5f6d 646c 6962 3c2f 7469 746c macs_mdlib</titl\n-00013040: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n-00013050: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n-00013060: 6266 6266 2220 643d 224d 3136 3835 2e35 bfbf\" d=\"M1685.5\n-00013070: 322c 2d38 3430 2e30 3743 3136 3235 2e33 2,-840.07C1625.3\n-00013080: 322c 2d38 3239 2e30 3820 3134 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206d 6f64 756c ...<\n-00013770: 6720 6964 3d22 6564 6765 3131 3022 2063 g id=\"edge110\" c\n-00013780: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-000137a0: 726f 6d61 6373 5f6d 6474 7970 6573 2623 romacs_mdtypes&#\n-000137b0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-000137c0: 635f 6772 6f6d 6163 735f 6770 755f 7574 c_gromacs_gpu_ut\n-000137d0: 696c 733c 2f74 6974 6c65 3e0a 3c70 6174 ils......module\n-00013940: 5f73 7263 5f67 726f 6d61 6373 5f6d 6474 _src_gromacs_mdt\n-00013950: 7970 6573 2623 3435 3b26 6774 3b6d 6f64 ypes->mod\n-00013960: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00013970: 6170 706c 6965 645f 666f 7263 6573 5f61 applied_forces_a\n-00013980: 7768 3c2f 7469 746c 653e 0a3c 7061 7468 wh......module_src_grom\n-00013c00: 6163 735f 646f 6d64 6563 2623 3435 3b26 acs_domdec-&\n-00013c10: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-00013c20: 6f6d 6163 735f 696d 643c 2f74 6974 6c65 omacs_imd......\n-00013e40: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n-00013e50: 635f 6772 6f6d 6163 735f 646f 6d64 6563 c_gromacs_domdec\n-00013e60: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-00013e70: 7372 635f 6772 6f6d 6163 735f 676d 786c src_gromacs_gmxl\n-00013e80: 6962 3c2f 7469 746c 653e 0a3c 7061 7468 ib......mo\n-00014090: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-000140a0: 5f64 6f6d 6465 6326 2334 353b 2667 743b _domdec->\n-000140b0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-000140c0: 6373 5f68 6172 6477 6172 653c 2f74 6974 cs_hardware</tit\n-000140d0: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n-000140e0: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n-000140f0: 6662 6662 6622 2064 3d22 4d32 3031 342e fbfbf\" d=\"M2014.\n-00014100: 3436 2c2d 3239 302e 3038 4332 3033 352e 46,-290.08C2035.\n-00014110: 3937 2c2d 3239 372e 3735 2032 3036 362e 97,-297.75 2066.\n-00014120: 3038 2c2d 3331 302e 3938 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226e 6f6e ......module_src_grom\n-00014500: 6163 735f 646f 6d64 6563 2623 3435 3b26 acs_domdec-&\n-00014510: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-00014520: 6f6d 6163 735f 6669 6c65 696f 3c2f 7469 omacs_fileio....\n-000146e0: 0a3c 6720 6964 3d22 6564 6765 3131 3722 ..<\n-00014700: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-00014710: 5f67 726f 6d61 6373 5f64 6f6d 6465 6326 _gromacs_domdec&\n-00014720: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-00014730: 7263 5f67 726f 6d61 6373 5f6d 6474 7970 rc_gromacs_mdtyp\n-00014740: 6573 3c2f 7469 746c 653e 0a3c 7061 7468 es...<\n-00014880: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...mod\n-000148f0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00014900: 646f 6d64 6563 2623 3435 3b26 6774 3b6d domdec->m\n-00014910: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00014920: 735f 6d64 7275 6e3c 2f74 6974 6c65 3e0a s_mdrun.\n-00014930: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ..\n-00014a50: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...mo\n-00014ac0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00014ad0: 5f64 6f6d 6465 6326 2334 353b 2667 743b _domdec->\n-00014ae0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00014af0: 6373 5f6e 626e 786d 3c2f 7469 746c 653e cs_nbnxm\n-00014b00: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ..\n-00014cb0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....m\n-00014d20: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00014d30: 735f 646f 6d64 6563 2623 3435 3b26 6774 s_domdec->\n-00014d40: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-00014d50: 6163 735f 6577 616c 643c 2f74 6974 6c65 acs_ewald</title\n-00014d60: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n-00014d70: 6e65 2220 7374 726f 6b65 3d22 7265 6422 ne\" stroke=\"red\"\n-00014d80: 2064 3d22 4d32 3032 312e 3239 2c2d 3237 d=\"M2021.29,-27\n-00014d90: 352e 3536 4332 3131 362e 3033 2c2d 3236 5.56C2116.03,-26\n-00014da0: 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726f 6d61 6373 5f67 7075 5f75 7469 _gromacs_gpu_uti\n-00015140: 6c73 3c2f 7469 746c 653e 0a3c 7061 7468 ls.....\n-000154a0: 3c67 2069 643d 2265 6467 6531 3432 2220 .module_src_\n-000154d0: 6772 6f6d 6163 735f 6d64 7275 6e26 2334 gromacs_mdrun\n-000154e0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-000154f0: 5f67 726f 6d61 6373 5f69 6d64 3c2f 7469 _gromacs_imd..\n-00015650: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....module\n-000156d0: 5f73 7263 5f67 726f 6d61 6373 5f6d 6472 _src_gromacs_mdr\n-000156e0: 756e 2623 3435 3b26 6774 3b6d 6f64 756c un->modul\n-000156f0: 655f 7372 635f 6772 6f6d 6163 735f 6573 e_src_gromacs_es\n-00015700: 7365 6e74 6961 6c64 796e 616d 6963 733c sentialdynamics<\n-00015710: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n-00015720: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n-00015730: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n-00015740: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n-00015750: 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7263 5f67 726f 6d61 module_src_groma\n-00015a10: 6373 5f67 6d78 6c69 6220 2d2d 3e0a 3c67 cs_gmxlib -->.<g\n-00015a20: 2069 643d 2265 6467 6531 3331 2220 636c id=\"edge131\" cl\n-00015a30: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.<tit\n-00015a40: 6c65 3e6d 6f64 756c 655f 7372 635f 6772 le>module_src_gr\n-00015a50: 6f6d 6163 735f 6d64 7275 6e26 2334 353b omacs_mdrun-\n-00015a60: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00015a70: 726f 6d61 6373 5f67 6d78 6c69 623c 2f74 romacs_gmxlib</t\n-00015a80: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-00015a90: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-00015aa0: 2362 6662 6662 6622 2064 3d22 4d31 3433 #bfbfbf\" d=\"M143\n-00015ab0: 362e 3738 2c2d 3232 382e 3034 4331 3431 6.78,-228.04C141\n-00015ac0: 382e 3835 2c2d 3233 362e 3338 2031 3339 8.85,-236.38 139\n-00015ad0: 332e 3235 2c2d 3235 302e 3131 2031 3337 3.25,-250.11 137\n-00015ae0: 352c 2d32 3637 2e34 3820 3133 3530 2e38 5,-267.48 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2031 3433 312e 3236 2c2d 826.74 1431.26,-\n-00015be0: 3837 372e 3720 3134 3931 2e38 342c 2d38 877.7 1491.84,-8\n-00015bf0: 3938 2e30 3522 2f3e 0a3c 706f 6c79 676f 98.05\"/>.<polygo\n-00015c00: 6e20 6669 6c6c 3d22 2362 6662 6662 6622 n fill=\"#bfbfbf\"\n-00015c10: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n-00015c20: 2220 706f 696e 7473 3d22 3134 3931 2e31 \" points=\"1491.1\n-00015c30: 322c 2d39 3031 2e34 3920 3135 3031 2e37 2,-901.49 1501.7\n-00015c40: 312c 2d39 3031 2e32 3720 3134 3933 2e33 1,-901.27 1493.3\n-00015c50: 2c2d 3839 342e 3834 2031 3439 312e 3132 ,-894.84 1491.12\n-00015c60: 2c2d 3930 312e 3439 222f 3e0a 3c2f 673e ,-901.49\"/>.</g>\n-00015c70: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 .<!-- module_src\n-00015c80: 5f67 726f 6d61 6373 5f6d 6472 756e 2623 _gromacs_mdrun&#\n-00015c90: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-00015ca0: 635f 6772 6f6d 6163 735f 6d69 6d69 6320 c_gromacs_mimic \n-00015cb0: 2d2d 3e0a 3c67 2069 643d 2265 6467 6531 -->.<g 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6820 6669 /title>.<path fi\n-00016160: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n-00016170: 3d22 7265 6422 2064 3d22 4d31 3436 342e =\"red\" d=\"M1464.\n-00016180: 342c 2d32 3331 2e34 3443 3134 3637 2e33 4,-231.44C1467.3\n-00016190: 2c2d 3234 362e 3438 2031 3436 382e 3435 ,-246.48 1468.45\n-000161a0: 2c2d 3237 322e 3532 2031 3437 332c 2d32 ,-272.52 1473,-2\n-000161b0: 3934 2e33 3520 3134 3834 2e36 382c 2d33 94.35 1484.68,-3\n-000161c0: 3530 2e33 3320 3135 3039 2e33 312c 2d34 50.33 1509.31,-4\n-000161d0: 3133 2e30 3720 3135 3230 2e30 342c 2d34 13.07 1520.04,-4\n-000161e0: 3435 2e38 3322 2f3e 0a3c 706f 6c79 676f 45.83\"/>.<polygo\n-000161f0: 6e20 6669 6c6c 3d22 7265 6422 2073 7472 n fill=\"red\" str\n-00016200: 6f6b 653d 2272 6564 2220 706f 696e 7473 oke=\"red\" points\n-00016210: 3d22 3135 3136 2e38 2c2d 3434 372e 3232 =\"1516.8,-447.22\n-00016220: 2031 3532 332e 3131 2c2d 3435 352e 3733 1523.11,-455.73\n-00016230: 2031 3532 332e 3439 2c2d 3434 352e 3134 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2031 251.82,-169.94 1\n-00016410: 3235 332e 382c 2d31 3633 2e32 3322 2f3e 253.8,-163.23\"/>\n-00016420: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n-00016430: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-00016440: 7275 6e26 2334 353b 2667 743b 6d6f 6475 run->modu\n-00016450: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6f le_src_gromacs_o\n-00016460: 7074 696f 6e73 202d 2d3e 0a3c 6720 6964 ptions -->.<g id\n-00016470: 3d22 6564 6765 3135 3222 2063 6c61 7373 =\"edge152\" class\n-00016480: 3d22 6564 6765 223e 0a3c 7469 746c 653e =\"edge\">.<title>\n-00016490: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-000164a0: 6373 5f6d 6472 756e 2623 3435 3b26 6774 cs_mdrun->\n-000164b0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-000164c0: 6163 735f 6f70 7469 6f6e 733c 2f74 6974 acs_options</tit\n-000164d0: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n-000164e0: 6e6f 6e65 2220 7374 726f 6b65 3d22 2332 none\" stroke=\"#2\n-000164f0: 3832 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6d64 6c69 623c 2f74 6974 6c65 3e0a 3c70 mdlib..\n-00016850: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....m\n-000168c0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-000168d0: 735f 6d64 7275 6e26 2334 353b 2667 743b s_mdrun->\n+00000750: 793d 2235 2c32 2220 643d 224d 3237 3838 y=\"5,2\" d=\"M2788\n+00000760: 2e36 342c 2d31 3034 2e36 4332 3833 332e .64,-104.6C2833.\n+00000770: 3536 2c2d 3132 312e 3333 2032 3930 352c 56,-121.33 2905,\n+00000780: 2d31 3537 2e33 3320 3239 3035 2c2d 3231 -157.33 2905,-21\n+00000790: 372e 3035 2032 3930 352c 2d34 3037 2e36 7.05 2905,-407.6\n+000007a0: 3620 3239 3035 2c2d 3430 372e 3636 2032 6 2905,-407.66 2\n+000007b0: 3930 352c 2d34 3037 2e36 3620 3239 3035 905,-407.66 2905\n+000007c0: 2c2d 3531 382e 3734 2032 3932 302c 2d35 ,-518.74 2920,-5\n+000007d0: 3436 2e30 3620 3239 3230 2c2d 3635 372e 46.06 2920,-657.\n+000007e0: 3134 2032 3932 302c 2d39 3733 2e34 3920 14 2920,-973.49 \n+000007f0: 3239 3230 2c2d 3937 332e 3439 2032 3932 2920,-973.49 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3939 2c2d 3134 3131 2e34 3120 376.99,-1411.41 \n+000008f0: 3133 3837 2e30 312c 2d31 3431 342e 3833 1387.01,-1414.83\n+00000900: 2031 3338 362e 3936 2c2d 3134 3037 2e38 1386.96,-1407.8\n+00000910: 3322 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 3\"/>.</g>.<!-- m\n+00000920: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00000930: 735f 7472 616a 6563 746f 7279 202d 2d3e s_trajectory -->\n+00000940: 0a3c 6720 6964 3d22 6e6f 6465 3133 2220 .<g id=\"node13\" \n+00000950: 636c 6173 733d 226e 6f64 6522 3e0a 3c74 class=\"node\">.<t\n+00000960: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+00000970: 6772 6f6d 6163 735f 7472 616a 6563 746f gromacs_trajecto\n+00000980: 7279 3c2f 7469 746c 653e 0a3c 656c 6c69 ry..\n+000009e0: 3c74 6578 7420 7465 7874 2d61 6e63 686f trajecto\n+00000a40: 7279 3c2f 7465 7874 3e0a 3c2f 673e 0a3c ry..<\n+00000a50: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f70 !-- module_src_p\n+00000a60: 726f 6772 616d 735f 6d64 7275 6e5f 7465 rograms_mdrun_te\n+00000a70: 7374 7326 2334 353b 2667 743b 6d6f 6475 sts->modu\n+00000a80: 6c65 5f73 7263 5f67 726f 6d61 6373 5f74 le_src_gromacs_t\n+00000a90: 7261 6a65 6374 6f72 7920 2d2d 3e0a 3c67 rajectory -->..module_src_pr\n+00000ad0: 6f67 7261 6d73 5f6d 6472 756e 5f74 6573 ograms_mdrun_tes\n+00000ae0: 7473 2623 3435 3b26 6774 3b6d 6f64 756c ts->modul\n+00000af0: 655f 7372 635f 6772 6f6d 6163 735f 7472 e_src_gromacs_tr\n+00000b00: 616a 6563 746f 7279 3c2f 7469 746c 653e ajectory\n+00000b10: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......modu\n+00000c50: 6c65 5f73 7263 5f67 726f 6d61 6373 5f68 le_src_gromacs_h\n+00000c60: 6172 6477 6172 653c 2f74 6974 6c65 3e0a ardware.\n+00000c70: 3c65 6c6c 6970 7365 2066 696c 6c3d 2223 .ha\n+00000d20: 7264 7761 7265 3c2f 7465 7874 3e0a 3c2f rdware...\n+00000d80: 3c67 2069 643d 2265 6467 6532 3738 2220 .module_src_\n+00000db0: 7072 6f67 7261 6d73 5f6d 6472 756e 5f74 programs_mdrun_t\n+00000dc0: 6573 7473 2623 3435 3b26 6774 3b6d 6f64 ests->mod\n+00000dd0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00000de0: 6861 7264 7761 7265 3c2f 7469 746c 653e hardware\n+00000df0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ....\n+00000fe0: 0a3c 6720 6964 3d22 6e6f 6465 3232 2220 ..module_src_\n+00001010: 6772 6f6d 6163 735f 6669 6c65 696f 3c2f gromacs_fileio..fileio.<\n+000010e0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>..<\n+00001130: 6720 6964 3d22 6564 6765 3238 3222 2063 g id=\"edge282\" c\n+00001140: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_p\n+00001160: 726f 6772 616d 735f 6d64 7275 6e5f 7465 rograms_mdrun_te\n+00001170: 7374 7326 2334 353b 2667 743b 6d6f 6475 sts->modu\n+00001180: 6c65 5f73 7263 5f67 726f 6d61 6373 5f66 le_src_gromacs_f\n+00001190: 696c 6569 6f3c 2f74 6974 6c65 3e0a 3c70 ileio......module\n+00001730: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+00001740: 616e 613c 2f74 6974 6c65 3e0a 3c65 6c6c ana..gmx\n+00001800: 616e 613c 2f74 6578 743e 0a3c 2f67 3e0a ana..\n+00001810: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..\n+00001880: 6d6f 6475 6c65 5f73 7263 5f70 726f 6772 module_src_progr\n+00001890: 616d 735f 6d64 7275 6e5f 7465 7374 7326 ams_mdrun_tests&\n+000018a0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+000018b0: 7263 5f67 726f 6d61 6373 5f67 6d78 616e rc_gromacs_gmxan\n+000018c0: 613c 2f74 6974 6c65 3e0a 3c70 6174 6820 a.\n+00001a20: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ....\n+00001ac0: 3c67 2069 643d 226e 6f64 6533 3222 2063 .module_src_g\n+00001af0: 726f 6d61 6373 5f6d 6473 7061 6e3c 2f74 romacs_mdspan..mdspan\n+00001bc0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ..\n+00001c10: 0a3c 6720 6964 3d22 6564 6765 3238 3322 ..<\n+00001c30: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+00001c40: 5f70 726f 6772 616d 735f 6d64 7275 6e5f _programs_mdrun_\n+00001c50: 7465 7374 7326 2334 353b 2667 743b 6d6f tests->mo\n+00001c60: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00001c70: 5f6d 6473 7061 6e3c 2f74 6974 6c65 3e0a _mdspan.\n+00001c80: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .....m\n+00001dc0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00001dd0: 735f 6577 616c 643c 2f74 6974 6c65 3e0a s_ewald.\n+00001de0: 3c67 2069 643d 2261 5f6e 6f64 6533 3322 .<\n+00001e40: 656c 6c69 7073 6520 6669 6c6c 3d22 2365 ellipse fill=\"#e\n+00001e50: 3563 6366 6622 2073 7472 6f6b 653d 2262 5ccff\" stroke=\"b\n+00001e60: 6c61 636b 2220 6378 3d22 3139 3722 2063 lack\" cx=\"197\" c\n+00001e70: 793d 222d 3932 2e33 3122 2072 783d 2232 y=\"-92.31\" rx=\"2\n+00001e80: 382e 3938 2220 7279 3d22 3133 2e33 3722 8.98\" ry=\"13.37\"\n+00001e90: 2f3e 0a3c 7465 7874 2074 6578 742d 616e />.ewald<\n+00001ef0: 2f74 6578 743e 0a3c 2f61 3e0a 3c2f 673e /text>..\n+00001f00: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ...\n+00001f50: 3c67 2069 643d 2265 6467 6532 3834 2220 .module_src_\n+00001f80: 7072 6f67 7261 6d73 5f6d 6472 756e 5f74 programs_mdrun_t\n+00001f90: 6573 7473 2623 3435 3b26 6774 3b6d 6f64 ests->mod\n+00001fa0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00001fb0: 6577 616c 643c 2f74 6974 6c65 3e0a 3c70 ewald...<\n+00002100: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_gro\n+00002160: 6d61 6373 5f67 6d78 7072 6570 726f 6365 macs_gmxpreproce\n+00002170: 7373 3c2f 7469 746c 653e 0a3c 656c 6c69 ss..gmxp\n+00002230: 7265 7072 6f63 6573 733c 2f74 6578 743e reprocess\n+00002240: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....mod\n+000022c0: 756c 655f 7372 635f 7072 6f67 7261 6d73 ule_src_programs\n+000022d0: 5f6d 6472 756e 5f74 6573 7473 2623 3435 _mdrun_tests-\n+000022e0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+000022f0: 6772 6f6d 6163 735f 676d 7870 7265 7072 gromacs_gmxprepr\n+00002300: 6f63 6573 733c 2f74 6974 6c65 3e0a 3c70 ocess...\n+00002510: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...module_src_grom\n+00002570: 6163 735f 636f 6d6d 616e 646c 696e 653c acs_commandline<\n+00002580: 2f74 6974 6c65 3e0a 3c67 2069 643d 2261 /title>...commandline...<\n+000026c0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_\n+00002740: 7372 635f 7072 6f67 7261 6d73 5f6d 6472 src_programs_mdr\n+00002750: 756e 5f74 6573 7473 2623 3435 3b26 6774 un_tests->\n+00002760: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00002770: 6163 735f 636f 6d6d 616e 646c 696e 653c acs_commandline<\n+00002780: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00002790: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+000027a0: 3d22 2332 6363 6332 3822 2073 7472 6f6b =\"#2ccc28\" strok\n+000027b0: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n+000027c0: 2220 643d 224d 3237 3533 2c2d 3130 352e \" d=\"M2753,-105.\n+000027d0: 3935 4332 3735 332c 2d31 3238 2e33 3520 95C2753,-128.35 \n+000027e0: 3237 3533 2c2d 3137 362e 3434 2032 3735 2753,-176.44 275\n+000027f0: 332c 2d32 3137 2e30 3520 3237 3533 2c2d 3,-217.05 2753,-\n+00002800: 3430 372e 3636 2032 3735 332c 2d34 3037 407.66 2753,-407\n+00002810: 2e36 3620 3237 3533 2c2d 3430 372e 3636 .66 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ry=\"13.37\n+00002bb0: 222f 3e0a 3c74 6578 7420 7465 7874 2d61 \"/>.<text text-a\n+00002bc0: 6e63 686f 723d 226d 6964 646c 6522 2078 nchor=\"middle\" x\n+00002bd0: 3d22 3730 3622 2079 3d22 2d31 3135 382e =\"706\" y=\"-1158.\n+00002be0: 3622 2066 6f6e 742d 6661 6d69 6c79 3d22 6\" font-family=\"\n+00002bf0: 4672 6565 5361 6e73 2220 666f 6e74 2d73 FreeSans\" font-s\n+00002c00: 697a 653d 2231 302e 3030 223e 6666 743c ize=\"10.00\">fft<\n+00002c10: 2f74 6578 743e 0a3c 2f67 3e0a 3c21 2d2d /text>.</g>.<!--\n+00002c20: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+00002c30: 6163 735f 636f 7272 656c 6174 696f 6e66 acs_correlationf\n+00002c40: 756e 6374 696f 6e73 2623 3435 3b26 6774 unctions->\n+00002c50: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00002c60: 6163 735f 6666 7420 2d2d 3e0a 3c67 2069 acs_fft -->.<g i\n+00002c70: 643d 2265 6467 6531 2220 636c 6173 733d d=\"edge1\" class=\n+00002c80: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+00002c90: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00002ca0: 735f 636f 7272 656c 6174 696f 6e66 756e s_correlationfun\n+00002cb0: 6374 696f 6e73 2623 3435 3b26 6774 3b6d ctions->m\n+00002cc0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00002cd0: 735f 6666 743c 2f74 6974 6c65 3e0a 3c70 s_fft.....\n+00002e30: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n+00002e40: 7263 5f67 726f 6d61 6373 5f63 6f72 7265 rc_gromacs_corre\n+00002e50: 6c61 7469 6f6e 6675 6e63 7469 6f6e 7326 lationfunctions&\n+00002e60: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00002e70: 7263 5f67 726f 6d61 6373 5f66 696c 6569 rc_gromacs_filei\n+00002e80: 6f3c 2f74 6974 6c65 3e0a 3c70 6174 6820 o.....<\n+00003070: 6720 6964 3d22 6564 6765 3222 2063 6c61 g id=\"edge2\" cla\n+00003080: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.module_src_gro\n+000030a0: 6d61 6373 5f63 6f72 7265 6c61 7469 6f6e macs_correlation\n+000030b0: 6675 6e63 7469 6f6e 7326 2334 353b 2667 functions-&g\n+000030c0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+000030d0: 6d61 6373 5f63 6f6d 6d61 6e64 6c69 6e65 macs_commandline\n+000030e0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ..\n+000031d0: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....modul\n+00003290: 655f 7372 635f 6772 6f6d 6163 735f 696d e_src_gromacs_im\n+000032a0: 643c 2f74 6974 6c65 3e0a 3c67 2069 643d d...\n+000033b0: 696d 643c 2f74 6578 743e 0a3c 2f61 3e0a imd..\n+000033c0: 3c2f 673e 0a3c 2f67 3e0a 3c21 2d2d 206d ....\n+00003410: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00003420: 6373 5f67 6d78 6c69 623c 2f74 6974 6c65 cs_gmxlib</title\n+00003430: 3e0a 3c65 6c6c 6970 7365 2066 696c 6c3d >.<ellipse fill=\n+00003440: 2223 6266 6266 6266 2220 7374 726f 6b65 \"#bfbfbf\" stroke\n+00003450: 3d22 626c 6163 6b22 2063 783d 2237 3936 =\"black\" cx=\"796\n+00003460: 2220 6379 3d22 2d39 3039 2e36 3222 2072 \" cy=\"-909.62\" r\n+00003470: 783d 2233 312e 3634 2220 7279 3d22 3133 x=\"31.64\" ry=\"13\n+00003480: 2e33 3722 2f3e 0a3c 7465 7874 2074 6578 .37\"/>.<text tex\n+00003490: 742d 616e 6368 6f72 3d22 6d69 6464 6c65 t-anchor=\"middle\n+000034a0: 2220 783d 2237 3936 2220 793d 222d 3930 \" x=\"796\" y=\"-90\n+000034b0: 372e 3132 2220 666f 6e74 2d66 616d 696c 7.12\" font-famil\n+000034c0: 793d 2246 7265 6553 616e 7322 2066 6f6e y=\"FreeSans\" fon\n+000034d0: 742d 7369 7a65 3d22 3130 2e30 3022 3e67 t-size=\"10.00\">g\n+000034e0: 6d78 6c69 623c 2f74 6578 743e 0a3c 2f67 mxlib</text>.</g\n+000034f0: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+00003500: 635f 6772 6f6d 6163 735f 696d 6426 2334 c_gromacs_imd\n+00003510: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00003520: 5f67 726f 6d61 6373 5f67 6d78 6c69 6220 _gromacs_gmxlib \n+00003530: 2d2d 3e0a 3c67 2069 643d 2265 6467 6537 -->.<g id=\"edge7\n+00003540: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n+00003550: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n+00003560: 635f 6772 6f6d 6163 735f 696d 6426 2334 c_gromacs_imd\n+00003570: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00003580: 5f67 726f 6d61 6373 5f67 6d78 6c69 623c _gromacs_gmxlib<\n+00003590: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+000035a0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+000035b0: 3d22 2362 6662 6662 6622 2064 3d22 4d31 =\"#bfbfbf\" d=\"M1\n+000035c0: 3037 372e 3835 2c2d 3733 332e 3543 3130 077.85,-733.5C10\n+000035d0: 3532 2e33 352c 2d37 3539 2e32 3320 3938 52.35,-759.23 98\n+000035e0: 362e 3937 2c2d 3832 322e 3139 2039 3232 6.97,-822.19 922\n+000035f0: 2c2d 3836 302e 3138 2038 3933 2e32 352c ,-860.18 893.25,\n+00003600: 2d38 3736 2e39 3920 3835 372e 3538 2c2d -876.99 857.58,-\n+00003610: 3839 302e 3037 2038 3331 2e35 342c 2d38 890.07 831.54,-8\n+00003620: 3938 2e33 3722 2f3e 0a3c 706f 6c79 676f 98.37\"/>.<polygo\n+00003630: 6e20 6669 6c6c 3d22 2362 6662 6662 6622 n fill=\"#bfbfbf\"\n+00003640: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+00003650: 2220 706f 696e 7473 3d22 3833 302e 3233 \" points=\"830.23\n+00003660: 2c2d 3839 352e 3131 2038 3231 2e37 322c ,-895.11 821.72,\n+00003670: 2d39 3031 2e34 3220 3833 322e 3331 2c2d -901.42 832.31,-\n+00003680: 3930 312e 3820 3833 302e 3233 2c2d 3839 901.8 830.23,-89\n+00003690: 352e 3131 222f 3e0a 3c2f 673e 0a3c 212d 5.11\"/>.</g>.<!-\n+000036a0: 2d20 6d6f 6475 6c65 5f73 7263 5f67 726f - module_src_gro\n+000036b0: 6d61 6373 5f6d 646c 6962 202d 2d3e 0a3c macs_mdlib -->.<\n+000036c0: 6720 6964 3d22 6e6f 6465 3231 2220 636c g id=\"node21\" cl\n+000036d0: 6173 733d 226e 6f64 6522 3e0a 3c74 6974 ass=\"node\">.<tit\n+000036e0: 6c65 3e6d 6f64 756c 655f 7372 635f 6772 le>module_src_gr\n+000036f0: 6f6d 6163 735f 6d64 6c69 623c 2f74 6974 omacs_mdlib</tit\n+00003700: 6c65 3e0a 3c65 6c6c 6970 7365 2066 696c le>.<ellipse fil\n+00003710: 6c3d 2223 6266 6266 6266 2220 7374 726f l=\"#bfbfbf\" stro\n+00003720: 6b65 3d22 626c 6163 6b22 2063 783d 2231 ke=\"black\" cx=\"1\n+00003730: 3233 3822 2063 793d 222d 3738 332e 3838 238\" cy=\"-783.88\n+00003740: 2220 7278 3d22 3238 2e30 3722 2072 793d \" rx=\"28.07\" ry=\n+00003750: 2231 332e 3337 222f 3e0a 3c74 6578 7420 \"13.37\"/>.<text \n+00003760: 7465 7874 2d61 6e63 686f 723d 226d 6964 text-anchor=\"mid\n+00003770: 646c 6522 2078 3d22 3132 3338 2220 793d dle\" x=\"1238\" y=\n+00003780: 222d 3738 312e 3338 2220 666f 6e74 2d66 \"-781.38\" font-f\n+00003790: 616d 696c 793d 2246 7265 6553 616e 7322 amily=\"FreeSans\"\n+000037a0: 2066 6f6e 742d 7369 7a65 3d22 3130 2e30 font-size=\"10.0\n+000037b0: 3022 3e6d 646c 6962 3c2f 7465 7874 3e0a 0\">mdlib</text>.\n+000037c0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+000037d0: 5f73 7263 5f67 726f 6d61 6373 5f69 6d64 _src_gromacs_imd\n+000037e0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+000037f0: 7372 635f 6772 6f6d 6163 735f 6d64 6c69 src_gromacs_mdli\n+00003800: 6220 2d2d 3e0a 3c67 2069 643d 2265 6467 b -->.<g id=\"edg\n+00003810: 6538 2220 636c 6173 733d 2265 6467 6522 e8\" class=\"edge\"\n+00003820: 3e0a 3c74 6974 6c65 3e6d 6f64 756c 655f >.<title>module_\n+00003830: 7372 635f 6772 6f6d 6163 735f 696d 6426 src_gromacs_imd&\n+00003840: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00003850: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+00003860: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......module_src_grom\n+000039c0: 6163 735f 696d 6426 2334 353b 2667 743b acs_imd->\n+000039d0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000039e0: 6373 5f66 696c 6569 6f3c 2f74 6974 6c65 cs_fileio....<\n+00003b00: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00003b10: 726f 6d61 6373 5f6d 6474 7970 6573 202d romacs_mdtypes -\n+00003b20: 2d3e 0a3c 6720 6964 3d22 6e6f 6465 3234 ->..\n+00003b40: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+00003b50: 635f 6772 6f6d 6163 735f 6d64 7479 7065 c_gromacs_mdtype\n+00003b60: 733c 2f74 6974 6c65 3e0a 3c65 6c6c 6970 s..\n+00003bc0: 3c74 6578 7420 7465 7874 2d61 6e63 686f mdtypes\n+00003c20: 3c2f 7465 7874 3e0a 3c2f 673e 0a3c 212d ...\n+00003c70: 3c67 2069 643d 2265 6467 6531 3022 2063 .module_src_g\n+00003ca0: 726f 6d61 6373 5f69 6d64 2623 3435 3b26 romacs_imd-&\n+00003cb0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00003cc0: 6f6d 6163 735f 6d64 7479 7065 733c 2f74 omacs_mdtypes..\n+00003d40: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....\n+00003e00: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00003e10: 6373 5f64 6f6d 6465 633c 2f74 6974 6c65 cs_domdec</title\n+00003e20: 3e0a 3c67 2069 643d 2261 5f6e 6f64 6532 >.<g id=\"a_node2\n+00003e30: 3622 3e3c 6120 786c 696e 6b3a 6872 6566 6\"><a xlink:href\n+00003e40: 3d22 6772 6f75 705f 5f6d 6f64 756c 655f =\"group__module_\n+00003e50: 5f64 6f6d 6465 632e 7868 746d 6c22 2074 _domdec.xhtml\" t\n+00003e60: 6172 6765 743d 225f 746f 7022 2078 6c69 arget=\"_top\" xli\n+00003e70: 6e6b 3a74 6974 6c65 3d22 646f 6d64 6563 nk:title=\"domdec\n+00003e80: 223e 0a3c 656c 6c69 7073 6520 6669 6c6c \">.<ellipse fill\n+00003e90: 3d22 2365 3563 6366 6622 2073 7472 6f6b =\"#e5ccff\" strok\n+00003ea0: 653d 2262 6c61 636b 2220 6378 3d22 3536 e=\"black\" cx=\"56\n+00003eb0: 3222 2063 793d 222d 3238 302e 3932 2220 2\" cy=\"-280.92\" \n+00003ec0: 7278 3d22 3336 2e31 3222 2072 793d 2231 rx=\"36.12\" ry=\"1\n+00003ed0: 332e 3337 222f 3e0a 3c74 6578 7420 7465 3.37\"/>.<text te\n+00003ee0: 7874 2d61 6e63 686f 723d 226d 6964 646c xt-anchor=\"middl\n+00003ef0: 6522 2078 3d22 3536 3222 2079 3d22 2d32 e\" x=\"562\" y=\"-2\n+00003f00: 3738 2e34 3222 2066 6f6e 742d 6661 6d69 78.42\" font-fami\n+00003f10: 6c79 3d22 4672 6565 5361 6e73 2220 666f ly=\"FreeSans\" fo\n+00003f20: 6e74 2d73 697a 653d 2231 302e 3030 223e nt-size=\"10.00\">\n+00003f30: 646f 6d64 6563 3c2f 7465 7874 3e0a 3c2f domdec</text>.</\n+00003f40: 613e 0a3c 2f67 3e0a 3c2f 673e 0a3c 212d a>.</g>.</g>.<!-\n+00003f50: 2d20 6d6f 6475 6c65 5f73 7263 5f67 726f - module_src_gro\n+00003f60: 6d61 6373 5f69 6d64 2623 3435 3b26 6774 macs_imd->\n+00003f70: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00003f80: 6163 735f 646f 6d64 6563 202d 2d3e 0a3c acs_domdec -->.<\n+00003f90: 6720 6964 3d22 6564 6765 3522 2063 6c61 g id=\"edge5\" cla\n+00003fa0: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.<titl\n+00003fb0: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n+00003fc0: 6d61 6373 5f69 6d64 2623 3435 3b26 6774 macs_imd->\n+00003fd0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00003fe0: 6163 735f 646f 6d64 6563 3c2f 7469 746c acs_domdec</titl\n+00003ff0: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00004000: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n+00004010: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n+00004020: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+00004030: 4d31 3036 332e 3032 2c2d 3731 372e 3131 M1063.02,-717.11\n+00004040: 4331 3033 312e 3037 2c2d 3731 322e 3120 C1031.07,-712.1 \n+00004050: 3937 372e 3335 2c2d 3639 392e 3534 2039 977.35,-699.54 9\n+00004060: 3431 2c2d 3637 312e 3537 2038 3837 2e35 41,-671.57 887.5\n+00004070: 342c 2d36 3330 2e34 3420 3838 342e 3034 4,-630.44 884.04\n+00004080: 2c2d 3630 372e 3138 2038 3536 2c2d 3534 ,-607.18 856,-54\n+00004090: 352e 3833 2038 3435 2e36 392c 2d35 3233 5.83 845.69,-523\n+000040a0: 2e32 3820 3831 362e 3132 2c2d 3334 372e .28 816.12,-347.\n+000040b0: 3238 2037 3938 2c2d 3333 302e 3335 2037 28 798,-330.35 7\n+000040c0: 3730 2e34 352c 2d33 3034 2e36 3120 3636 70.45,-304.61 66\n+000040d0: 372e 3233 2c2d 3239 312e 3439 2036 3036 7.23,-291.49 606\n+000040e0: 2e37 322c 2d32 3835 2e37 3222 2f3e 0a3c .72,-285.72\"/>.<\n+000040f0: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n+00004100: 3832 6663 6322 2073 7472 6f6b 653d 2223 82fcc\" stroke=\"#\n+00004110: 3238 3266 6363 2220 706f 696e 7473 3d22 282fcc\" points=\"\n+00004120: 3630 362e 3934 2c2d 3238 322e 3233 2035 606.94,-282.23 5\n+00004130: 3936 2e36 362c 2d32 3834 2e37 3920 3630 96.66,-284.79 60\n+00004140: 362e 332c 2d32 3839 2e32 2036 3036 2e39 6.3,-289.2 606.9\n+00004150: 342c 2d32 3832 2e32 3322 2f3e 0a3c 2f67 4,-282.23\"/>.</g\n+00004160: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+00004170: 635f 6772 6f6d 6163 735f 696d 6426 2334 c_gromacs_imd\n+00004180: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00004190: 5f67 726f 6d61 6373 5f63 6f6d 6d61 6e64 _gromacs_command\n+000041a0: 6c69 6e65 202d 2d3e 0a3c 6720 6964 3d22 line -->.<g id=\"\n+000041b0: 6564 6765 3422 2063 6c61 7373 3d22 6564 edge4\" class=\"ed\n+000041c0: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n+000041d0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f69 le_src_gromacs_i\n+000041e0: 6d64 2623 3435 3b26 6774 3b6d 6f64 756c md->modul\n+000041f0: 655f 7372 635f 6772 6f6d 6163 735f 636f e_src_gromacs_co\n+00004200: 6d6d 616e 646c 696e 653c 2f74 6974 6c65 mmandline</title\n+00004210: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+00004220: 6e65 2220 7374 726f 6b65 3d22 626c 6163 ne\" stroke=\"blac\n+00004230: 6b22 2073 7472 6f6b 652d 6461 7368 6172 k\" stroke-dashar\n+00004240: 7261 793d 2235 2c32 2220 643d 224d 3131 ray=\"5,2\" d=\"M11\n+00004250: 3133 2e38 332c 2d37 3135 2e33 3943 3131 13.83,-715.39C11\n+00004260: 3434 2e38 372c 2d37 3038 2e38 3920 3131 44.87,-708.89 11\n+00004270: 3938 2e39 322c 2d36 3935 2e31 3220 3132 98.92,-695.12 12\n+00004280: 3430 2c2d 3637 312e 3537 2031 3235 352e 40,-671.57 1255.\n+00004290: 3533 2c2d 3636 322e 3637 2031 3235 352e 53,-662.67 1255.\n+000042a0: 3734 2c2d 3635 352e 3532 2031 3237 302c 74,-655.52 1270,\n+000042b0: 2d36 3434 2e37 2031 3238 352e 3037 2c2d -644.7 1285.07,-\n+000042c0: 3633 332e 3237 2031 3330 322e 3836 2c2d 633.27 1302.86,-\n+000042d0: 3632 312e 3833 2031 3331 372e 3434 2c2d 621.83 1317.44,-\n+000042e0: 3631 322e 3934 222f 3e0a 3c70 6f6c 7967 612.94\"/>.<polyg\n+000042f0: 6f6e 2066 696c 6c3d 2262 6c61 636b 2220 on fill=\"black\" \n+00004300: 7374 726f 6b65 3d22 626c 6163 6b22 2070 stroke=\"black\" p\n+00004310: 6f69 6e74 733d 2231 3331 392e 3238 2c2d oints=\"1319.28,-\n+00004320: 3631 352e 3932 2031 3332 362e 3034 2c2d 615.92 1326.04,-\n+00004330: 3630 372e 3736 2031 3331 352e 3637 2c2d 607.76 1315.67,-\n+00004340: 3630 392e 3932 2031 3331 392e 3238 2c2d 609.92 1319.28,-\n+00004350: 3631 352e 3932 222f 3e0a 3c2f 673e 0a3c 615.92\"/>.</g>.<\n+00004360: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00004370: 726f 6d61 6373 5f6d 6472 756e 7574 696c romacs_mdrunutil\n+00004380: 6974 7920 2d2d 3e0a 3c67 2069 643d 226e ity -->.<g id=\"n\n+00004390: 6f64 6534 3822 2063 6c61 7373 3d22 6e6f ode48\" class=\"no\n+000043a0: 6465 223e 0a3c 7469 746c 653e 6d6f 6475 de\">.<title>modu\n+000043b0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+000043c0: 6472 756e 7574 696c 6974 793c 2f74 6974 drunutility</tit\n+000043d0: 6c65 3e0a 3c67 2069 643d 2261 5f6e 6f64 le>.<g id=\"a_nod\n+000043e0: 6534 3822 3e3c 6120 786c 696e 6b3a 6872 e48\"><a xlink:hr\n+000043f0: 6566 3d22 6772 6f75 705f 5f6d 6f64 756c ef=\"group__modul\n+00004400: 655f 5f6d 6472 756e 7574 696c 6974 792e e__mdrunutility.\n+00004410: 7868 746d 6c22 2074 6172 6765 743d 225f xhtml\" target=\"_\n+00004420: 746f 7022 2078 6c69 6e6b 3a74 6974 6c65 top\" xlink:title\n+00004430: 3d22 6d64 7275 6e75 7469 6c69 7479 223e =\"mdrunutility\">\n+00004440: 0a3c 656c 6c69 7073 6520 6669 6c6c 3d22 .<ellipse fill=\"\n+00004450: 2365 3563 6366 6622 2073 7472 6f6b 653d #e5ccff\" stroke=\n+00004460: 2262 6c61 636b 2220 6378 3d22 3130 3233 \"black\" cx=\"1023\n+00004470: 2220 6379 3d22 2d36 3538 2e31 3422 2072 \" cy=\"-658.14\" r\n+00004480: 783d 2234 372e 3235 2220 7279 3d22 3133 x=\"47.25\" ry=\"13\n+00004490: 2e33 3722 2f3e 0a3c 7465 7874 2074 6578 .37\"/>.<text tex\n+000044a0: 742d 616e 6368 6f72 3d22 6d69 6464 6c65 t-anchor=\"middle\n+000044b0: 2220 783d 2231 3032 3322 2079 3d22 2d36 \" x=\"1023\" y=\"-6\n+000044c0: 3535 2e36 3422 2066 6f6e 742d 6661 6d69 55.64\" font-fami\n+000044d0: 6c79 3d22 4672 6565 5361 6e73 2220 666f ly=\"FreeSans\" fo\n+000044e0: 6e74 2d73 697a 653d 2231 302e 3030 223e nt-size=\"10.00\">\n+000044f0: 6d64 7275 6e75 7469 6c69 7479 3c2f 7465 mdrunutility</te\n+00004500: 7874 3e0a 3c2f 613e 0a3c 2f67 3e0a 3c2f xt>.</a>.</g>.</\n+00004510: 673e 0a3c 212d 2d20 6d6f 6475 6c65 5f73 g>.<!-- module_s\n+00004520: 7263 5f67 726f 6d61 6373 5f69 6d64 2623 rc_gromacs_imd&#\n+00004530: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00004540: 635f 6772 6f6d 6163 735f 6d64 7275 6e75 c_gromacs_mdrunu\n+00004550: 7469 6c69 7479 202d 2d3e 0a3c 6720 6964 tility -->.<g id\n+00004560: 3d22 6564 6765 3922 2063 6c61 7373 3d22 =\"edge9\" class=\"\n+00004570: 6564 6765 223e 0a3c 7469 746c 653e 6d6f edge\">.<title>mo\n+00004580: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00004590: 5f69 6d64 2623 3435 3b26 6774 3b6d 6f64 _imd->mod\n+000045a0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+000045b0: 6d64 7275 6e75 7469 6c69 7479 3c2f 7469 mdrunutility</ti\n+000045c0: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+000045d0: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+000045e0: 3238 3266 6363 2220 7374 726f 6b65 2d64 282fcc\" stroke-d\n+000045f0: 6173 6861 7272 6179 3d22 352c 3222 2064 asharray=\"5,2\" d\n+00004600: 3d22 4d31 3037 362e 3839 2c2d 3730 382e =\"M1076.89,-708.\n+00004610: 3834 4331 3036 372e 3535 2c2d 3730 302e 84C1067.55,-700.\n+00004620: 3232 2031 3035 342e 3431 2c2d 3638 382e 22 1054.41,-688.\n+00004630: 3131 2031 3034 332e 3435 2c2d 3637 372e 11 1043.45,-677.\n+00004640: 3939 222f 3e0a 3c70 6f6c 7967 6f6e 2066 99\"/>.<polygon f\n+00004650: 696c 6c3d 2223 3238 3266 6363 2220 7374 ill=\"#282fcc\" st\n+00004660: 726f 6b65 3d22 2332 3832 6663 6322 2070 roke=\"#282fcc\" p\n+00004670: 6f69 6e74 733d 2231 3034 352e 3636 2c2d oints=\"1045.66,-\n+00004680: 3637 352e 3237 2031 3033 352e 3933 2c2d 675.27 1035.93,-\n+00004690: 3637 312e 3036 2031 3034 302e 3931 2c2d 671.06 1040.91,-\n+000046a0: 3638 302e 3431 2031 3034 352e 3636 2c2d 680.41 1045.66,-\n+000046b0: 3637 352e 3237 222f 3e0a 3c2f 673e 0a3c 675.27\"/>.</g>.<\n+000046c0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+000046d0: 726f 6d61 6373 5f65 7373 656e 7469 616c romacs_essential\n+000046e0: 6479 6e61 6d69 6373 202d 2d3e 0a3c 6720 dynamics -->.<g \n+000046f0: 6964 3d22 6e6f 6465 3422 2063 6c61 7373 id=\"node4\" class\n+00004700: 3d22 6e6f 6465 223e 0a3c 7469 746c 653e =\"node\">.<title>\n+00004710: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00004720: 6373 5f65 7373 656e 7469 616c 6479 6e61 cs_essentialdyna\n+00004730: 6d69 6373 3c2f 7469 746c 653e 0a3c 656c mics..essent\n+000047f0: 6961 6c64 796e 616d 6963 733c 2f74 6578 ialdynamics....modu\n+00004880: 6c65 5f73 7263 5f67 726f 6d61 6373 5f65 le_src_gromacs_e\n+00004890: 7373 656e 7469 616c 6479 6e61 6d69 6373 ssentialdynamics\n+000048a0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+000048b0: 7372 635f 6772 6f6d 6163 735f 676d 786c src_gromacs_gmxl\n+000048c0: 6962 3c2f 7469 746c 653e 0a3c 7061 7468 ib......module\n+00004a70: 5f73 7263 5f67 726f 6d61 6373 5f65 7373 _src_gromacs_ess\n+00004a80: 656e 7469 616c 6479 6e61 6d69 6373 2623 entialdynamics&#\n+00004a90: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00004aa0: 635f 6772 6f6d 6163 735f 6d64 6c69 623c c_gromacs_mdlib<\n+00004ab0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00004ac0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00004ad0: 3d22 2362 6662 6662 6622 2064 3d22 4d37 =\"#bfbfbf\" d=\"M7\n+00004ae0: 3437 2e31 352c 2d33 3537 2e30 3443 3735 47.15,-357.04C75\n+00004af0: 362e 3137 2c2d 3336 362e 3333 2037 3635 6.17,-366.33 765\n+00004b00: 2e37 352c 2d33 3739 2e37 3620 3737 312c .75,-379.76 771,\n+00004b10: 2d33 3933 2e32 3220 3738 342e 3932 2c2d -393.22 784.92,-\n+00004b20: 3432 382e 3932 2037 3933 2e34 372c 2d37 428.92 793.47,-7\n+00004b30: 3037 2e37 3920 3832 312c 2d37 3334 2e34 07.79 821,-734.4\n+00004b40: 3420 3834 382e 3235 2c2d 3736 302e 3832 4 848.25,-760.82\n+00004b50: 2031 3130 322e 3135 2c2d 3737 352e 3920 1102.15,-775.9 \n+00004b60: 3131 3939 2e39 382c 2d37 3830 2e39 3522 1199.98,-780.95\"\n+00004b70: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n+00004b80: 3d22 2362 6662 6662 6622 2073 7472 6f6b =\"#bfbfbf\" strok\n+00004b90: 653d 2223 6266 6266 6266 2220 706f 696e e=\"#bfbfbf\" poin\n+00004ba0: 7473 3d22 3131 3939 2e38 372c 2d37 3834 ts=\"1199.87,-784\n+00004bb0: 2e34 3520 3132 3130 2e30 332c 2d37 3831 .45 1210.03,-781\n+00004bc0: 2e34 3620 3132 3030 2e32 322c 2d37 3737 .46 1200.22,-777\n+00004bd0: 2e34 3620 3131 3939 2e38 372c 2d37 3834 .46 1199.87,-784\n+00004be0: 2e34 3522 2f3e 0a3c 2f67 3e0a 3c21 2d2d .45\"/>.</g>.<!--\n+00004bf0: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+00004c00: 6163 735f 6573 7365 6e74 6961 6c64 796e acs_essentialdyn\n+00004c10: 616d 6963 7326 2334 353b 2667 743b 6d6f amics->mo\n+00004c20: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00004c30: 5f66 696c 6569 6f20 2d2d 3e0a 3c67 2069 _fileio -->.<g i\n+00004c40: 643d 2265 6467 6531 3322 2063 6c61 7373 d=\"edge13\" class\n+00004c50: 3d22 6564 6765 223e 0a3c 7469 746c 653e =\"edge\">.<title>\n+00004c60: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00004c70: 6373 5f65 7373 656e 7469 616c 6479 6e61 cs_essentialdyna\n+00004c80: 6d69 6373 2623 3435 3b26 6774 3b6d 6f64 mics->mod\n+00004c90: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00004ca0: 6669 6c65 696f 3c2f 7469 746c 653e 0a3c fileio.<\n+00004cb0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+00004cc0: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+00004cd0: 2220 643d 224d 3736 332e 3035 2c2d 3335 \" d=\"M763.05,-35\n+00004ce0: 352e 3543 3836 302e 3832 2c2d 3338 362e 5.5C860.82,-386.\n+00004cf0: 3232 2031 3133 382e 3131 2c2d 3437 332e 22 1138.11,-473.\n+00004d00: 3035 2031 3138 302c 2d34 3832 2e39 3620 05 1180,-482.96 \n+00004d10: 3132 3639 2e32 312c 2d35 3034 2e30 3620 1269.21,-504.06 \n+00004d20: 3133 3736 2e31 2c2d 3531 392e 3538 2031 1376.1,-519.58 1\n+00004d30: 3433 302e 3832 2c2d 3532 362e 3833 222f 430.82,-526.83\"/\n+00004d40: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.....m\n+00004e30: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00004e40: 735f 6573 7365 6e74 6961 6c64 796e 616d s_essentialdynam\n+00004e50: 6963 7326 2334 353b 2667 743b 6d6f 6475 ics->modu\n+00004e60: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+00004e70: 6474 7970 6573 3c2f 7469 746c 653e 0a3c dtypes.<\n+00004e80: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+00004e90: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+00004ea0: 2220 643d 224d 3733 342e 3439 2c2d 3335 \" d=\"M734.49,-35\n+00004eb0: 372e 3343 3733 382e 3532 2c2d 3336 362e 7.3C738.52,-366.\n+00004ec0: 3934 2037 3433 2e38 312c 2d33 3830 2e37 94 743.81,-380.7\n+00004ed0: 2037 3437 2c2d 3339 332e 3232 2037 3834 747,-393.22 784\n+00004ee0: 2e38 332c 2d35 3431 2e38 3220 3730 352c .83,-541.82 705,\n+00004ef0: 2d36 3132 2e35 3220 3739 382c 2d37 3334 -612.52 798,-734\n+00004f00: 2e34 3420 3832 332e 3738 2c2d 3736 382e .44 823.78,-768.\n+00004f10: 3233 2039 3338 2e35 362c 2d38 3132 2e32 23 938.56,-812.2\n+00004f20: 3920 3939 382e 3032 2c2d 3833 332e 3422 9 998.02,-833.4\"\n+00004f30: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.....mod\n+00005020: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00005030: 6573 7365 6e74 6961 6c64 796e 616d 6963 essentialdynamic\n+00005040: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+00005050: 5f73 7263 5f67 726f 6d61 6373 5f64 6f6d _src_gromacs_dom\n+00005060: 6465 633c 2f74 6974 6c65 3e0a 3c70 6174 dec......<\n+000051d0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+000051e0: 5f67 726f 6d61 6373 5f65 7373 656e 7469 _gromacs_essenti\n+000051f0: 616c 6479 6e61 6d69 6373 2623 3435 3b26 aldynamics-&\n+00005200: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00005210: 6f6d 6163 735f 636f 6d6d 616e 646c 696e omacs_commandlin\n+00005220: 653c 2f74 6974 6c65 3e0a 3c70 6174 6820 e......\n+000053e0: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+000053f0: 635f 6772 6f6d 6163 735f 6573 7365 6e74 c_gromacs_essent\n+00005400: 6961 6c64 796e 616d 6963 7326 2334 353b ialdynamics-\n+00005410: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00005420: 726f 6d61 6373 5f6d 6472 756e 7574 696c romacs_mdrunutil\n+00005430: 6974 793c 2f74 6974 6c65 3e0a 3c70 6174 ity......<\n+000055f0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+00005600: 5f67 726f 6d61 6373 5f74 6f70 6f6c 6f67 _gromacs_topolog\n+00005610: 793c 2f74 6974 6c65 3e0a 3c65 6c6c 6970 y..\n+00005670: 3c74 6578 7420 7465 7874 2d61 6e63 686f topolog\n+000056d0: 793c 2f74 6578 743e 0a3c 2f67 3e0a 3c21 y....module\n+00005750: 5f73 7263 5f67 726f 6d61 6373 5f74 6f70 _src_gromacs_top\n+00005760: 6f6c 6f67 7926 2334 353b 2667 743b 6d6f ology->mo\n+00005770: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00005780: 5f6d 6474 7970 6573 3c2f 7469 746c 653e _mdtypes\n+00005790: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e .\n+00005810: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....modu\n+000058d0: 6c65 5f73 7263 5f74 6573 7475 7469 6c73 le_src_testutils\n+000058e0: 3c2f 7469 746c 653e 0a3c 6720 6964 3d22 ..\n+00005950: 3c65 6c6c 6970 7365 2066 696c 6c3d 2223 .testutils...\n+00005a20: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_\n+00005c40: 7372 635f 6772 6f6d 6163 735f 6666 7426 src_gromacs_fft&\n+00005c50: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00005c60: 7263 5f67 726f 6d61 6373 5f68 6172 6477 rc_gromacs_hardw\n+00005c70: 6172 653c 2f74 6974 6c65 3e0a 3c70 6174 are......mod\n+00005da0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00005db0: 6770 755f 7574 696c 733c 2f74 6974 6c65 gpu_utils</title\n+00005dc0: 3e0a 3c65 6c6c 6970 7365 2066 696c 6c3d >.<ellipse fill=\n+00005dd0: 2223 6266 6266 6266 2220 7374 726f 6b65 \"#bfbfbf\" stroke\n+00005de0: 3d22 626c 6163 6b22 2063 783d 2236 3837 =\"black\" cx=\"687\n+00005df0: 2220 6379 3d22 2d31 3033 352e 3336 2220 \" cy=\"-1035.36\" \n+00005e00: 7278 3d22 3339 2e37 2220 7279 3d22 3133 rx=\"39.7\" ry=\"13\n+00005e10: 2e33 3722 2f3e 0a3c 7465 7874 2074 6578 .37\"/>.<text tex\n+00005e20: 742d 616e 6368 6f72 3d22 6d69 6464 6c65 t-anchor=\"middle\n+00005e30: 2220 783d 2236 3837 2220 793d 222d 3130 \" x=\"687\" y=\"-10\n+00005e40: 3332 2e38 3622 2066 6f6e 742d 6661 6d69 32.86\" font-fami\n+00005e50: 6c79 3d22 4672 6565 5361 6e73 2220 666f ly=\"FreeSans\" fo\n+00005e60: 6e74 2d73 697a 653d 2231 302e 3030 223e nt-size=\"10.00\">\n+00005e70: 6770 755f 7574 696c 733c 2f74 6578 743e gpu_utils</text>\n+00005e80: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n+00005e90: 655f 7372 635f 6772 6f6d 6163 735f 6666 e_src_gromacs_ff\n+00005ea0: 7426 2334 353b 2667 743b 6d6f 6475 6c65 t->module\n+00005eb0: 5f73 7263 5f67 726f 6d61 6373 5f67 7075 _src_gromacs_gpu\n+00005ec0: 5f75 7469 6c73 202d 2d3e 0a3c 6720 6964 _utils -->.<g id\n+00005ed0: 3d22 6564 6765 3230 2220 636c 6173 733d =\"edge20\" class=\n+00005ee0: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+00005ef0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00005f00: 735f 6666 7426 2334 353b 2667 743b 6d6f s_fft->mo\n+00005f10: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00005f20: 5f67 7075 5f75 7469 6c73 3c2f 7469 746c _gpu_utils</titl\n+00005f30: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00005f40: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n+00005f50: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n+00005f60: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+00005f70: 4d36 3739 2e34 312c 2d31 3135 382e 3633 M679.41,-1158.63\n+00005f80: 4336 3438 2e38 372c 2d31 3135 352e 3336 C648.87,-1155.36\n+00005f90: 2036 3030 2e30 322c 2d31 3134 342e 3920 600.02,-1144.9 \n+00005fa0: 3537 372c 2d31 3131 312e 3636 2035 3535 577,-1111.66 555\n+00005fb0: 2e34 342c 2d31 3038 302e 3533 2036 3036 .44,-1080.53 606\n+00005fc0: 2e33 382c 2d31 3035 382e 3433 2036 3435 .38,-1058.43 645\n+00005fd0: 2e39 352c 2d31 3034 362e 3533 222f 3e0a .95,-1046.53\"/>.\n+00005fe0: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 <polygon fill=\"#\n+00005ff0: 3238 3266 6363 2220 7374 726f 6b65 3d22 282fcc\" stroke=\"\n+00006000: 2332 3832 6663 6322 2070 6f69 6e74 733d #282fcc\" points=\n+00006010: 2236 3437 2e30 372c 2d31 3034 392e 3835 \"647.07,-1049.85\n+00006020: 2036 3535 2e37 322c 2d31 3034 332e 3733 655.72,-1043.73\n+00006030: 2036 3435 2e31 342c 2d31 3034 332e 3133 645.14,-1043.13\n+00006040: 2036 3437 2e30 372c 2d31 3034 392e 3835 647.07,-1049.85\n+00006050: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n+00006060: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00006070: 5f73 7761 7020 2d2d 3e0a 3c67 2069 643d _swap -->.<g id=\n+00006080: 226e 6f64 6537 2220 636c 6173 733d 226e \"node7\" class=\"n\n+00006090: 6f64 6522 3e0a 3c74 6974 6c65 3e6d 6f64 ode\">.<title>mod\n+000060a0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+000060b0: 7377 6170 3c2f 7469 746c 653e 0a3c 6720 swap...swap...\n+000061e0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ..\n+00006240: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n+00006250: 7263 5f67 726f 6d61 6373 5f73 7761 7026 rc_gromacs_swap&\n+00006260: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00006270: 7263 5f67 726f 6d61 6373 5f67 6d78 6c69 rc_gromacs_gmxli\n+00006280: 623c 2f74 6974 6c65 3e0a 3c70 6174 6820 b......module_src_gro\n+00006470: 6d61 6373 5f73 7761 7026 2334 353b 2667 macs_swap-&g\n+00006480: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00006490: 6d61 6373 5f6d 646c 6962 3c2f 7469 746c macs_mdlib......mo\n+000066d0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+000066e0: 5f73 7761 7026 2334 353b 2667 743b 6d6f _swap->mo\n+000066f0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00006700: 5f66 696c 6569 6f3c 2f74 6974 6c65 3e0a _fileio.\n+00006710: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .\n+00006840: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....mo\n+000068b0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+000068c0: 5f73 7761 7026 2334 353b 2667 743b 6d6f _swap->mo\n+000068d0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+000068e0: 5f6d 6474 7970 6573 3c2f 7469 746c 653e _mdtypes\n+000068f0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......module_src_grom\n+00006ac0: 6163 735f 7377 6170 2623 3435 3b26 6774 acs_swap->\n+00006ad0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00006ae0: 6163 735f 646f 6d64 6563 3c2f 7469 746c acs_domdec..\n+00006b70: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 .<\n+00006be0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_grom\n+00006c60: 6163 735f 7377 6170 2623 3435 3b26 6774 acs_swap->\n+00006c70: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00006c80: 6163 735f 6d64 7275 6e75 7469 6c69 7479 acs_mdrunutility\n+00006c90: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ..\n+00006d40: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....m\n+00006e00: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00006e10: 735f 7461 626c 6573 3c2f 7469 746c 653e s_tables\n+00006e20: 0a3c 6720 6964 3d22 615f 6e6f 6465 3130 ...t\n+00006f30: 6162 6c65 733c 2f74 6578 743e 0a3c 2f61 ables....\n+00006f90: 0a3c 6720 6964 3d22 6564 6765 3332 2220 ..module_src_\n+00006fc0: 6772 6f6d 6163 735f 676d 786c 6962 2623 gromacs_gmxlib&#\n+00006fd0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00006fe0: 635f 6772 6f6d 6163 735f 7461 626c 6573 c_gromacs_tables\n+00006ff0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 .\n+00007150: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....\n+00007230: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00007240: 6373 5f67 6d78 6c69 6226 2334 353b 2667 cs_gmxlib-&g\n+00007250: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00007260: 6d61 6373 5f6d 646c 6962 3c2f 7469 746c macs_mdlib</titl\n+00007270: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00007280: 6f6e 6522 2073 7472 6f6b 653d 2223 3263 one\" stroke=\"#2c\n+00007290: 6363 3238 2220 7374 726f 6b65 2d64 6173 cc28\" stroke-das\n+000072a0: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+000072b0: 4d38 3237 2e32 392c 2d39 3036 2e36 3743 M827.29,-906.67C\n+000072c0: 3837 392e 3539 2c2d 3930 322e 3831 2039 879.59,-902.81 9\n+000072d0: 3836 2e37 372c 2d38 3931 2e36 3120 3130 86.77,-891.61 10\n+000072e0: 3732 2c2d 3836 302e 3138 2031 3039 332e 72,-860.18 1093.\n+000072f0: 3836 2c2d 3835 322e 3132 2031 3039 362e 86,-852.12 1096.\n+00007300: 3237 2c2d 3834 332e 3933 2031 3131 372c 27,-843.93 1117,\n+00007310: 2d38 3333 2e33 3120 3131 3435 2e36 372c -833.31 1145.67,\n+00007320: 2d38 3138 2e36 3320 3131 3739 2e38 2c2d -818.63 1179.8,-\n+00007330: 3830 342e 3320 3132 3034 2e36 372c 2d37 804.3 1204.67,-7\n+00007340: 3935 2e30 3922 2f3e 0a3c 706f 6c79 676f 95.09\"/>.<polygo\n+00007350: 6e20 6669 6c6c 3d22 2332 6363 6332 3822 n fill=\"#2ccc28\"\n+00007360: 2073 7472 6f6b 653d 2223 3263 6363 3238 stroke=\"#2ccc28\n+00007370: 2220 706f 696e 7473 3d22 3132 3036 2e31 \" points=\"1206.1\n+00007380: 362c 2d37 3938 2e32 3720 3132 3134 2e33 6,-798.27 1214.3\n+00007390: 382c 2d37 3931 2e35 3820 3132 3033 2e37 8,-791.58 1203.7\n+000073a0: 392c 2d37 3931 2e36 3820 3132 3036 2e31 9,-791.68 1206.1\n+000073b0: 362c 2d37 3938 2e32 3722 2f3e 0a3c 2f67 6,-798.27\"/>.</g\n+000073c0: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+000073d0: 635f 6772 6f6d 6163 735f 676d 786c 6962 c_gromacs_gmxlib\n+000073e0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+000073f0: 7372 635f 6772 6f6d 6163 735f 6d64 7479 src_gromacs_mdty\n+00007400: 7065 7320 2d2d 3e0a 3c67 2069 643d 2265 pes -->.<g id=\"e\n+00007410: 6467 6532 3922 2063 6c61 7373 3d22 6564 dge29\" class=\"ed\n+00007420: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n+00007430: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n+00007440: 6d78 6c69 6226 2334 353b 2667 743b 6d6f mxlib->mo\n+00007450: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00007460: 5f6d 6474 7970 6573 3c2f 7469 746c 653e _mdtypes\n+00007470: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ....\n+00007590: 0a3c 6720 6964 3d22 6564 6765 3330 2220 ..module_src_\n+000075c0: 6772 6f6d 6163 735f 676d 786c 6962 2623 gromacs_gmxlib&#\n+000075d0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+000075e0: 635f 6772 6f6d 6163 735f 6577 616c 643c c_gromacs_ewald<\n+000075f0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>......\n+000077c0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000077d0: 6373 5f67 6d78 6c69 6226 2334 353b 2667 cs_gmxlib-&g\n+000077e0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+000077f0: 6d61 6373 5f63 6f6d 6d61 6e64 6c69 6e65 macs_commandline\n+00007800: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......module_src_grom\n+000079f0: 6163 735f 746f 6f6c 7326 2334 353b 2667 acs_tools-&g\n+00007a00: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00007a10: 6d61 6373 5f66 6674 3c2f 7469 746c 653e macs_fft\n+00007a20: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ....\n+00007b60: 3c21 2d2d 206d 6f64 756c 655f 7372 635f .\n+00007bc0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n+00007bd0: 7263 5f67 726f 6d61 6373 5f74 6f6f 6c73 rc_gromacs_tools\n+00007be0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+00007bf0: 7372 635f 6772 6f6d 6163 735f 676d 786c src_gromacs_gmxl\n+00007c00: 6962 3c2f 7469 746c 653e 0a3c 7061 7468 ib......module\n+00007de0: 5f73 7263 5f67 726f 6d61 6373 5f74 6f6f _src_gromacs_too\n+00007df0: 6c73 2623 3435 3b26 6774 3b6d 6f64 756c ls->modul\n+00007e00: 655f 7372 635f 6772 6f6d 6163 735f 7472 e_src_gromacs_tr\n+00007e10: 616a 6563 746f 7279 3c2f 7469 746c 653e ajectory\n+00007e20: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ....<\n+00008000: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00008010: 726f 6d61 6373 5f74 6f6f 6c73 2623 3435 romacs_tools-\n+00008020: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00008030: 6772 6f6d 6163 735f 6d64 6c69 6220 2d2d gromacs_mdlib --\n+00008040: 3e0a 3c67 2069 643d 2265 6467 6533 3922 >..<\n+00008060: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+00008070: 5f67 726f 6d61 6373 5f74 6f6f 6c73 2623 _gromacs_tools&#\n+00008080: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00008090: 635f 6772 6f6d 6163 735f 6d64 6c69 623c c_gromacs_mdlib<\n+000080a0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>....\n+00008220: 0a3c 6720 6964 3d22 6564 6765 3334 2220 ..module_src_\n+00008250: 6772 6f6d 6163 735f 746f 6f6c 7326 2334 gromacs_tools\n+00008260: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00008270: 5f67 726f 6d61 6373 5f66 696c 6569 6f3c _gromacs_fileio<\n+00008280: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>......<\n+000084d0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+000084e0: 5f67 726f 6d61 6373 5f74 6f6f 6c73 2623 _gromacs_tools&#\n+000084f0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00008500: 635f 6772 6f6d 6163 735f 6d64 7479 7065 c_gromacs_mdtype\n+00008510: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s.....\n+000086f0: 3c67 2069 643d 2265 6467 6533 3722 2063 .module_src_g\n+00008720: 726f 6d61 6373 5f74 6f6f 6c73 2623 3435 romacs_tools-\n+00008730: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00008740: 6772 6f6d 6163 735f 6577 616c 643c 2f74 gromacs_ewald......modul\n+00008930: 655f 7372 635f 6772 6f6d 6163 735f 6c69 e_src_gromacs_li\n+00008940: 7374 6564 5f66 6f72 6365 733c 2f74 6974 sted_forces</tit\n+00008950: 6c65 3e0a 3c67 2069 643d 2261 5f6e 6f64 le>.<g id=\"a_nod\n+00008960: 6533 3522 3e3c 6120 786c 696e 6b3a 6872 e35\"><a xlink:hr\n+00008970: 6566 3d22 6772 6f75 705f 5f6d 6f64 756c ef=\"group__modul\n+00008980: 655f 5f6c 6973 7465 645f 5f66 6f72 6365 e__listed__force\n+00008990: 732e 7868 746d 6c22 2074 6172 6765 743d s.xhtml\" target=\n+000089a0: 225f 746f 7022 2078 6c69 6e6b 3a74 6974 \"_top\" xlink:tit\n+000089b0: 6c65 3d22 6c69 7374 6564 5f66 6f72 6365 le=\"listed_force\n+000089c0: 7322 3e0a 3c65 6c6c 6970 7365 2066 696c s\">.<ellipse fil\n+000089d0: 6c3d 2223 6535 6363 6666 2220 7374 726f l=\"#e5ccff\" stro\n+000089e0: 6b65 3d22 626c 6163 6b22 2063 783d 2232 ke=\"black\" cx=\"2\n+000089f0: 3032 3822 2063 793d 222d 3135 352e 3138 028\" cy=\"-155.18\n+00008a00: 2220 7278 3d22 3530 2e38 3222 2072 793d \" rx=\"50.82\" ry=\n+00008a10: 2231 332e 3337 222f 3e0a 3c74 6578 7420 \"13.37\"/>.<text \n+00008a20: 7465 7874 2d61 6e63 686f 723d 226d 6964 text-anchor=\"mid\n+00008a30: 646c 6522 2078 3d22 3230 3238 2220 793d dle\" x=\"2028\" y=\n+00008a40: 222d 3135 322e 3638 2220 666f 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45;>module_sr\n+00008b30: 635f 6772 6f6d 6163 735f 6c69 7374 6564 c_gromacs_listed\n+00008b40: 5f66 6f72 6365 733c 2f74 6974 6c65 3e0a _forces.\n+00008b50: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ..\n+00008d40: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...modul\n+00008d90: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n+00008da0: 7275 6e3c 2f74 6974 6c65 3e0a 3c67 2069 run...\n+00008e60: 3c74 6578 7420 7465 7874 2d61 6e63 686f mdrun...<\n+00008ed0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modul\n+00008f40: 655f 7372 635f 6772 6f6d 6163 735f 746f e_src_gromacs_to\n+00008f50: 6f6c 7326 2334 353b 2667 743b 6d6f 6475 ols->modu\n+00008f60: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+00008f70: 6472 756e 3c2f 7469 746c 653e 0a3c 7061 drun......m\n+000091c0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+000091d0: 735f 7261 6e64 6f6d 3c2f 7469 746c 653e s_random\n+000091e0: 0a3c 6720 6964 3d22 615f 6e6f 6465 3338 ...ra\n+000092f0: 6e64 6f6d 3c2f 7465 7874 3e0a 3c2f 613e ndom.\n+00009300: 0a3c 2f67 3e0a 3c2f 673e 0a3c 212d 2d20 ....<\n+00009350: 6720 6964 3d22 6564 6765 3432 2220 636c g id=\"edge42\" cl\n+00009360: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.module_src_gr\n+00009380: 6f6d 6163 735f 746f 6f6c 7326 2334 353b omacs_tools-\n+00009390: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+000093a0: 726f 6d61 6373 5f72 616e 646f 6d3c 2f74 romacs_random......mo\n+00009ba0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00009bb0: 5f74 6162 6c65 7326 2334 353b 2667 743b _tables->\n+00009bc0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00009bd0: 6373 5f6d 6474 7970 6573 3c2f 7469 746c cs_mdtypes</titl\n+00009be0: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00009bf0: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+00009c00: 6266 6266 2220 643d 224d 3231 3337 2e35 bfbf\" d=\"M2137.5\n+00009c10: 392c 2d39 342e 3139 4332 3039 352e 3936 9,-94.19C2095.96\n+00009c20: 2c2d 3936 2e37 3620 3230 3230 2e34 322c ,-96.76 2020.42,\n+00009c30: 2d31 3036 2e33 3720 3139 3638 2c2d 3134 -106.37 1968,-14\n+00009c40: 312e 3734 2031 3933 392e 3532 2c2d 3136 1.74 1939.52,-16\n+00009c50: 302e 3936 2031 3933 332e 352c 2d31 3731 0.96 1933.5,-171\n+00009c60: 2e38 3920 3139 3233 2c2d 3230 342e 3631 .89 1923,-204.61\n+00009c70: 2031 3839 392e 3439 2c2d 3237 372e 3834 1899.49,-277.84\n+00009c80: 2031 3935 352c 2d34 3733 2e34 3420 3139 1955,-473.44 19\n+00009c90: 3831 2c2d 3534 352e 3833 2031 3938 372e 81,-545.83 1987.\n+00009ca0: 3139 2c2d 3536 332e 3036 2031 3939 362e 19,-563.06 1996.\n+00009cb0: 3431 2c2d 3536 342e 3131 2032 3030 312c 41,-564.11 2001,\n+00009cc0: 2d35 3831 2e38 3320 3230 3131 2e39 352c -581.83 2011.95,\n+00009cd0: 2d36 3234 2e31 2031 3939 332e 3939 2c2d -624.1 1993.99,-\n+00009ce0: 3634 322e 3936 2031 3936 312c 2d36 3731 642.96 1961,-671\n+00009cf0: 2e35 3720 3139 3039 2e37 382c 2d37 3136 .57 1909.78,-716\n+00009d00: 2031 3838 352e 392c 2d37 3131 2e37 3720 1885.9,-711.77 \n+00009d10: 3138 3232 2c2d 3733 342e 3434 2031 3731 1822,-734.44 171\n+00009d20: 382e 3439 2c2d 3737 312e 3137 2031 3639 8.49,-771.17 169\n+00009d30: 312e 322c 2d37 3738 2e34 3520 3135 3833 1.2,-778.45 1583\n+00009d40: 2c2d 3739 372e 3331 2031 3339 392e 372c ,-797.31 1399.7,\n+00009d50: 2d38 3239 2e32 3720 3131 3738 2e31 2c2d -829.27 1178.1,-\n+00009d60: 3834 302e 3632 2031 3038 322e 3135 2c2d 840.62 1082.15,-\n+00009d70: 3834 342e 3233 222f 3e0a 3c70 6f6c 7967 844.23\"/>.<polyg\n+00009d80: 6f6e 2066 696c 6c3d 2223 6266 6266 6266 on fill=\"#bfbfbf\n+00009d90: 2220 7374 726f 6b65 3d22 2362 6662 6662 \" stroke=\"#bfbfb\n+00009da0: 6622 2070 6f69 6e74 733d 2231 3038 312e f\" points=\"1081.\n+00009db0: 3736 2c2d 3834 302e 3735 2031 3037 312e 76,-840.75 1071.\n+00009dc0: 3839 2c2d 3834 342e 3631 2031 3038 322e 89,-844.61 1082.\n+00009dd0: 3031 2c2d 3834 372e 3734 2031 3038 312e 01,-847.74 1081.\n+00009de0: 3736 2c2d 3834 302e 3735 222f 3e0a 3c2f 76,-840.75\"/>.</\n+00009df0: 673e 0a3c 212d 2d20 6d6f 6475 6c65 5f73 g>.<!-- module_s\n+00009e00: 7263 5f67 726f 6d61 6373 5f74 6162 6c65 rc_gromacs_table\n+00009e10: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+00009e20: 5f73 7263 5f67 726f 6d61 6373 5f6d 6473 _src_gromacs_mds\n+00009e30: 7061 6e20 2d2d 3e0a 3c67 2069 643d 2265 pan -->.<g id=\"e\n+00009e40: 6467 6534 3622 2063 6c61 7373 3d22 6564 dge46\" class=\"ed\n+00009e50: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n+00009e60: 6c65 5f73 7263 5f67 726f 6d61 6373 5f74 le_src_gromacs_t\n+00009e70: 6162 6c65 7326 2334 353b 2667 743b 6d6f ables->mo\n+00009e80: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00009e90: 5f6d 6473 7061 6e3c 2f74 6974 6c65 3e0a _mdspan.\n+00009ea0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ..\n+00009f90: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...modul\n+00009fe0: 655f 7372 635f 6772 6f6d 6163 735f 7365 e_src_gromacs_se\n+00009ff0: 6c65 6374 696f 6e3c 2f74 6974 6c65 3e0a lection.\n+0000a000: 3c67 2069 643d 2261 5f6e 6f64 6531 3122 ..selection...\n+0000a130: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...mod\n+0000a180: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0000a190: 6f70 7469 6f6e 733c 2f74 6974 6c65 3e0a options.\n+0000a1a0: 3c67 2069 643d 2261 5f6e 6f64 6531 3922 ..\n+0000a2b0: 6f70 7469 6f6e 733c 2f74 6578 743e 0a3c options.<\n+0000a2c0: 2f61 3e0a 3c2f 673e 0a3c 2f67 3e0a 3c21 /a>.....modul\n+0000a340: 655f 7372 635f 6772 6f6d 6163 735f 7365 e_src_gromacs_se\n+0000a350: 6c65 6374 696f 6e26 2334 353b 2667 743b lection->\n+0000a360: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000a370: 6373 5f6f 7074 696f 6e73 3c2f 7469 746c cs_options</titl\n+0000a380: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0000a390: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n+0000a3a0: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n+0000a3b0: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+0000a3c0: 4d31 3039 392e 3337 2c2d 3538 312e 3838 M1099.37,-581.88\n+0000a3d0: 4331 3131 302e 3434 2c2d 3534 302e 3033 C1110.44,-540.03\n+0000a3e0: 2031 3134 352c 2d33 3939 2e39 3320 3131 1145,-399.93 11\n+0000a3f0: 3435 2c2d 3238 312e 3932 2031 3134 352c 45,-281.92 1145,\n+0000a400: 2d32 3831 2e39 3220 3131 3435 2c2d 3238 -281.92 1145,-28\n+0000a410: 312e 3932 2031 3134 352c 2d32 3137 2e30 1.92 1145,-217.0\n+0000a420: 3520 3131 3435 2c2d 3138 312e 3834 2031 5 1145,-181.84 1\n+0000a430: 3134 352c 2d31 3430 2e39 3920 3131 3435 145,-140.99 1145\n+0000a440: 2c2d 3131 362e 3136 222f 3e0a 3c70 6f6c ,-116.16\"/>.<pol\n+0000a450: 7967 6f6e 2066 696c 6c3d 2223 3238 3266 ygon fill=\"#282f\n+0000a460: 6363 2220 7374 726f 6b65 3d22 2332 3832 cc\" stroke=\"#282\n+0000a470: 6663 6322 2070 6f69 6e74 733d 2231 3134 fcc\" points=\"114\n+0000a480: 382e 352c 2d31 3135 2e39 3520 3131 3435 8.5,-115.95 1145\n+0000a490: 2c2d 3130 352e 3935 2031 3134 312e 352c ,-105.95 1141.5,\n+0000a4a0: 2d31 3135 2e39 3520 3131 3438 2e35 2c2d -115.95 1148.5,-\n+0000a4b0: 3131 352e 3935 222f 3e0a 3c2f 673e 0a3c 115.95\"/>.</g>.<\n+0000a4c0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+0000a4d0: 726f 6d61 6373 5f73 656c 6563 7469 6f6e romacs_selection\n+0000a4e0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0000a4f0: 7372 635f 6772 6f6d 6163 735f 6f6e 6c69 src_gromacs_onli\n+0000a500: 6e65 6865 6c70 202d 2d3e 0a3c 6720 6964 nehelp -->.<g id\n+0000a510: 3d22 6564 6765 3438 2220 636c 6173 733d =\"edge48\" class=\n+0000a520: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+0000a530: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000a540: 735f 7365 6c65 6374 696f 6e26 2334 353b s_selection-\n+0000a550: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+0000a560: 726f 6d61 6373 5f6f 6e6c 696e 6568 656c romacs_onlinehel\n+0000a570: 703c 2f74 6974 6c65 3e0a 3c70 6174 6820 p...\n+0000a6b0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...module_src_grom\n+0000a730: 6163 735f 7365 6c65 6374 696f 6e26 2334 acs_selection\n+0000a740: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+0000a750: 5f67 726f 6d61 6373 5f72 616e 646f 6d3c _gromacs_random<\n+0000a760: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>..<\n+0000a870: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n+0000a880: 6363 6332 3822 2073 7472 6f6b 653d 2223 ccc28\" stroke=\"#\n+0000a890: 3263 6363 3238 2220 706f 696e 7473 3d22 2ccc28\" points=\"\n+0000a8a0: 3234 3035 2e33 2c2d 3130 312e 3238 2032 2405.3,-101.28 2\n+0000a8b0: 3431 342e 3732 2c2d 3936 2e34 3320 3234 414.72,-96.43 24\n+0000a8c0: 3034 2e33 332c 2d39 342e 3335 2032 3430 04.33,-94.35 240\n+0000a8d0: 352e 332c 2d31 3031 2e32 3822 2f3e 0a3c 5.3,-101.28\"/>.<\n+0000a8e0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modu\n+0000a930: 6c65 5f73 7263 5f67 726f 6d61 6373 5f75 le_src_gromacs_u\n+0000a940: 7469 6c69 7479 3c2f 7469 746c 653e 0a3c tility.<\n+0000a950: 6720 6964 3d22 615f 6e6f 6465 3132 223e g id=\"a_node12\">\n+0000a960: 3c61 2078 6c69 6e6b 3a68 7265 663d 2267 ..utility.\n+0000aa70: 3c2f 613e 0a3c 2f67 3e0a 3c2f 673e 0a3c ...<\n+0000aa80: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+0000aa90: 726f 6d61 6373 5f63 6f6d 7061 7420 2d2d romacs_compat --\n+0000aaa0: 3e0a 3c67 2069 643d 226e 6f64 6534 3222 >..<\n+0000aac0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+0000aad0: 5f67 726f 6d61 6373 5f63 6f6d 7061 743c _gromacs_compat<\n+0000aae0: 2f74 6974 6c65 3e0a 3c65 6c6c 6970 7365 /title>..compat....module_src_grom\n+0000ac20: 6163 735f 7574 696c 6974 7926 2334 353b acs_utility-\n+0000ac30: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+0000ac40: 726f 6d61 6373 5f63 6f6d 7061 743c 2f74 romacs_compat......modul\n+0000ae60: 655f 7372 635f 6772 6f6d 6163 735f 7574 e_src_gromacs_ut\n+0000ae70: 696c 6974 7926 2334 353b 2667 743b 6d6f ility->mo\n+0000ae80: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000ae90: 5f67 7075 5f75 7469 6c73 3c2f 7469 746c _gpu_utils</titl\n+0000aea0: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0000aeb0: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+0000aec0: 6266 6266 2220 643d 224d 3930 372e 3539 bfbf\" d=\"M907.59\n+0000aed0: 2c2d 3130 3931 2e39 3343 3836 342e 3331 ,-1091.93C864.31\n+0000aee0: 2c2d 3130 3832 2037 3736 2e35 362c 2d31 ,-1082 776.56,-1\n+0000aef0: 3036 302e 3420 3732 352e 3637 2c2d 3130 060.4 725.67,-10\n+0000af00: 3437 2e32 3422 2f3e 0a3c 706f 6c79 676f 47.24\"/>.<polygo\n+0000af10: 6e20 6669 6c6c 3d22 2362 6662 6662 6622 n fill=\"#bfbfbf\"\n+0000af20: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+0000af30: 2220 706f 696e 7473 3d22 3732 362e 3237 \" points=\"726.27\n+0000af40: 2c2d 3130 3433 2e37 3820 3731 352e 3731 ,-1043.78 715.71\n+0000af50: 2c2d 3130 3434 2e36 3520 3732 342e 3531 ,-1044.65 724.51\n+0000af60: 2c2d 3130 3530 2e35 3520 3732 362e 3237 ,-1050.55 726.27\n+0000af70: 2c2d 3130 3433 2e37 3822 2f3e 0a3c 2f67 ,-1043.78\"/>.</g\n+0000af80: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+0000af90: 635f 6772 6f6d 6163 735f 6d69 6d69 6320 c_gromacs_mimic \n+0000afa0: 2d2d 3e0a 3c67 2069 643d 226e 6f64 6531 -->.<g id=\"node1\n+0000afb0: 3422 2063 6c61 7373 3d22 6e6f 6465 223e 4\" class=\"node\">\n+0000afc0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+0000afd0: 7263 5f67 726f 6d61 6373 5f6d 696d 6963 rc_gromacs_mimic\n+0000afe0: 3c2f 7469 746c 653e 0a3c 656c 6c69 7073 ..<\n+0000b040: 7465 7874 2074 6578 742d 616e 6368 6f72 text text-anchor\n+0000b050: 3d22 6d69 6464 6c65 2220 783d 2231 3035 =\"middle\" x=\"105\n+0000b060: 3122 2079 3d22 2d31 3532 2e36 3822 2066 1\" y=\"-152.68\" f\n+0000b070: 6f6e 742d 6661 6d69 6c79 3d22 4672 6565 ont-family=\"Free\n+0000b080: 5361 6e73 2220 666f 6e74 2d73 697a 653d Sans\" font-size=\n+0000b090: 2231 302e 3030 223e 6d69 6d69 633c 2f74 \"10.00\">mimic....module_src_grom\n+0000b120: 6163 735f 6d69 6d69 6326 2334 353b 2667 acs_mimic-&g\n+0000b130: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0000b140: 6d61 6373 5f6d 646c 6962 3c2f 7469 746c macs_mdlib......m\n+0000b2e0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000b2f0: 735f 6d61 7468 3c2f 7469 746c 653e 0a3c s_math.<\n+0000b300: 656c 6c69 7073 6520 6669 6c6c 3d22 2362 ellipse fill=\"#b\n+0000b310: 6662 6662 6622 2073 7472 6f6b 653d 2262 fbfbf\" stroke=\"b\n+0000b320: 6c61 636b 2220 6378 3d22 3233 3134 2220 lack\" cx=\"2314\" \n+0000b330: 6379 3d22 2d39 322e 3331 2220 7278 3d22 cy=\"-92.31\" rx=\"\n+0000b340: 3237 2220 7279 3d22 3133 2e33 3722 2f3e 27\" ry=\"13.37\"/>\n+0000b350: 0a3c 7465 7874 2074 6578 742d 616e 6368 .math....module_src_grom\n+0000b430: 6163 735f 6d61 7468 2623 3435 3b26 6774 acs_math->\n+0000b440: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+0000b450: 6163 735f 6d64 7370 616e 3c2f 7469 746c acs_mdspan......\n+0000b5a0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000b5b0: 6373 5f68 6172 6477 6172 6526 2334 353b cs_hardware-\n+0000b5c0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+0000b5d0: 726f 6d61 6373 5f67 7075 5f75 7469 6c73 romacs_gpu_utils\n+0000b5e0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 .\n+0000b650: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....modul\n+0000b720: 655f 7372 635f 6772 6f6d 6163 735f 6d6f e_src_gromacs_mo\n+0000b730: 6475 6c61 7273 696d 756c 6174 6f72 3c2f dularsimulator</\n+0000b740: 7469 746c 653e 0a3c 6720 6964 3d22 615f title>.<g id=\"a_\n+0000b750: 6e6f 6465 3137 223e 3c61 2078 6c69 6e6b node17\"><a xlink\n+0000b760: 3a68 7265 663d 2267 726f 7570 5f5f 6d6f :href=\"group__mo\n+0000b770: 6475 6c65 5f5f 6d6f 6475 6c61 7273 696d dule__modularsim\n+0000b780: 756c 6174 6f72 2e78 6874 6d6c 2220 7461 ulator.xhtml\" ta\n+0000b790: 7267 6574 3d22 5f74 6f70 2220 786c 696e rget=\"_top\" xlin\n+0000b7a0: 6b3a 7469 746c 653d 226d 6f64 756c 6172 k:title=\"modular\n+0000b7b0: 7369 6d75 6c61 746f 7222 3e0a 3c65 6c6c simulator\">.<ell\n+0000b7c0: 6970 7365 2066 696c 6c3d 2223 6535 6363 ipse fill=\"#e5cc\n+0000b7d0: 6666 2220 7374 726f 6b65 3d22 626c 6163 ff\" stroke=\"blac\n+0000b7e0: 6b22 2063 783d 2231 3030 3122 2063 793d k\" cx=\"1001\" cy=\n+0000b7f0: 222d 3436 392e 3533 2220 7278 3d22 3635 \"-469.53\" rx=\"65\n+0000b800: 2e31 3122 2072 793d 2231 332e 3337 222f .11\" ry=\"13.37\"/\n+0000b810: 3e0a 3c74 6578 7420 7465 7874 2d61 6e63 >.<text text-anc\n+0000b820: 686f 723d 226d 6964 646c 6522 2078 3d22 hor=\"middle\" x=\"\n+0000b830: 3130 3031 2220 793d 222d 3436 372e 3033 1001\" y=\"-467.03\n+0000b840: 2220 666f 6e74 2d66 616d 696c 793d 2246 \" font-family=\"F\n+0000b850: 7265 6553 616e 7322 2066 6f6e 742d 7369 reeSans\" font-si\n+0000b860: 7a65 3d22 3130 2e30 3022 3e6d 6f64 756c ze=\"10.00\">modul\n+0000b870: 6172 7369 6d75 6c61 746f 723c 2f74 6578 arsimulator</tex\n+0000b880: 743e 0a3c 2f61 3e0a 3c2f 673e 0a3c 2f67 t>.</a>.</g>.</g\n+0000b890: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+0000b8a0: 635f 6772 6f6d 6163 735f 6d6f 6475 6c61 c_gromacs_modula\n+0000b8b0: 7273 696d 756c 6174 6f72 2623 3435 3b26 rsimulator-&\n+0000b8c0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+0000b8d0: 6f6d 6163 735f 676d 786c 6962 202d 2d3e omacs_gmxlib -->\n+0000b8e0: 0a3c 6720 6964 3d22 6564 6765 3636 2220 .<g id=\"edge66\" \n+0000b8f0: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n+0000b900: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+0000b910: 6772 6f6d 6163 735f 6d6f 6475 6c61 7273 gromacs_modulars\n+0000b920: 696d 756c 6174 6f72 2623 3435 3b26 6774 imulator->\n+0000b930: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+0000b940: 6163 735f 676d 786c 6962 3c2f 7469 746c acs_gmxlib</titl\n+0000b950: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0000b960: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+0000b970: 6266 6266 2220 643d 224d 3938 312e 3731 bfbf\" d=\"M981.71\n+0000b980: 2c2d 3438 322e 3432 4339 3334 2e35 352c ,-482.42C934.55,\n+0000b990: 2d35 3132 2e38 3320 3831 342e 3138 2c2d -512.83 814.18,-\n+0000b9a0: 3539 382e 3733 2037 3732 2c2d 3730 372e 598.73 772,-707.\n+0000b9b0: 3537 2037 3438 2e30 382c 2d37 3639 2e32 57 748.08,-769.2\n+0000b9c0: 3920 3737 322e 3333 2c2d 3834 382e 3938 9 772.33,-848.98\n+0000b9d0: 2037 3836 2e38 332c 2d38 3836 2e38 3222 786.83,-886.82\"\n+0000b9e0: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n+0000b9f0: 3d22 2362 6662 6662 6622 2073 7472 6f6b =\"#bfbfbf\" strok\n+0000ba00: 653d 2223 6266 6266 6266 2220 706f 696e e=\"#bfbfbf\" poin\n+0000ba10: 7473 3d22 3738 332e 3637 2c2d 3838 382e ts=\"783.67,-888.\n+0000ba20: 3333 2037 3930 2e36 322c 2d38 3936 2e33 33 790.62,-896.3\n+0000ba30: 3320 3739 302e 3137 2c2d 3838 352e 3735 3 790.17,-885.75\n+0000ba40: 2037 3833 2e36 372c 2d38 3838 2e33 3322 783.67,-888.33\"\n+0000ba50: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />.</g>.<!-- mod\n+0000ba60: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0000ba70: 7075 6c6c 696e 6720 2d2d 3e0a 3c67 2069 pulling -->.<g i\n+0000ba80: 643d 226e 6f64 6531 3822 2063 6c61 7373 d=\"node18\" class\n+0000ba90: 3d22 6e6f 6465 223e 0a3c 7469 746c 653e =\"node\">.<title>\n+0000baa0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000bab0: 6373 5f70 756c 6c69 6e67 3c2f 7469 746c cs_pulling</titl\n+0000bac0: 653e 0a3c 656c 6c69 7073 6520 6669 6c6c e>.<ellipse fill\n+0000bad0: 3d22 2362 6662 6662 6622 2073 7472 6f6b =\"#bfbfbf\" strok\n+0000bae0: 653d 2262 6c61 636b 2220 6378 3d22 3132 e=\"black\" cx=\"12\n+0000baf0: 3335 2220 6379 3d22 2d31 3535 2e31 3822 35\" cy=\"-155.18\"\n+0000bb00: 2072 783d 2233 312e 3233 2220 7279 3d22 rx=\"31.23\" ry=\"\n+0000bb10: 3133 2e33 3722 2f3e 0a3c 7465 7874 2074 13.37\"/>.<text t\n+0000bb20: 6578 742d 616e 6368 6f72 3d22 6d69 6464 ext-anchor=\"midd\n+0000bb30: 6c65 2220 783d 2231 3233 3522 2079 3d22 le\" x=\"1235\" y=\"\n+0000bb40: 2d31 3532 2e36 3822 2066 6f6e 742d 6661 -152.68\" font-fa\n+0000bb50: 6d69 6c79 3d22 4672 6565 5361 6e73 2220 mily=\"FreeSans\" \n+0000bb60: 666f 6e74 2d73 697a 653d 2231 302e 3030 font-size=\"10.00\n+0000bb70: 223e 7075 6c6c 696e 673c 2f74 6578 743e \">pulling</text>\n+0000bb80: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n+0000bb90: 655f 7372 635f 6772 6f6d 6163 735f 6d6f e_src_gromacs_mo\n+0000bba0: 6475 6c61 7273 696d 756c 6174 6f72 2623 dularsimulator&#\n+0000bbb0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+0000bbc0: 635f 6772 6f6d 6163 735f 7075 6c6c 696e c_gromacs_pullin\n+0000bbd0: 6720 2d2d 3e0a 3c67 2069 643d 2265 6467 g -->.<g id=\"edg\n+0000bbe0: 6537 3022 2063 6c61 7373 3d22 6564 6765 e70\" class=\"edge\n+0000bbf0: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n+0000bc00: 5f73 7263 5f67 726f 6d61 6373 5f6d 6f64 _src_gromacs_mod\n+0000bc10: 756c 6172 7369 6d75 6c61 746f 7226 2334 ularsimulator\n+0000bc20: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+0000bc30: 5f67 726f 6d61 6373 5f70 756c 6c69 6e67 _gromacs_pulling\n+0000bc40: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......m\n+0000bde0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000bdf0: 735f 6d6f 6475 6c61 7273 696d 756c 6174 s_modularsimulat\n+0000be00: 6f72 2623 3435 3b26 6774 3b6d 6f64 756c or->modul\n+0000be10: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n+0000be20: 6c69 623c 2f74 6974 6c65 3e0a 3c70 6174 lib...\n+0000bf80: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ..\n+0000bff0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n+0000c000: 7263 5f67 726f 6d61 6373 5f6d 6f64 756c rc_gromacs_modul\n+0000c010: 6172 7369 6d75 6c61 746f 7226 2334 353b arsimulator-\n+0000c020: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+0000c030: 726f 6d61 6373 5f66 696c 6569 6f3c 2f74 romacs_fileio</t\n+0000c040: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+0000c050: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n+0000c060: 2362 6662 6662 6622 2064 3d22 4d31 3035 #bfbfbf\" d=\"M105\n+0000c070: 352e 322c 2d34 3737 2e30 3343 3131 3531 5.2,-477.03C1151\n+0000c080: 2e36 382c 2d34 3839 2e32 3120 3133 3530 .68,-489.21 1350\n+0000c090: 2e33 382c 2d35 3135 2e31 3820 3134 3331 .38,-515.18 1431\n+0000c0a0: 2e34 382c 2d35 3236 2e32 3422 2f3e 0a3c .48,-526.24\"/>.<\n+0000c0b0: 706f 6c79 676f 6e20 6669 6c6c 3d22 2362 polygon fill=\"#b\n+0000c0c0: 6662 6662 6622 2073 7472 6f6b 653d 2223 fbfbf\" stroke=\"#\n+0000c0d0: 6266 6266 6266 2220 706f 696e 7473 3d22 bfbfbf\" points=\"\n+0000c0e0: 3134 3331 2e32 392c 2d35 3239 2e37 3420 1431.29,-529.74 \n+0000c0f0: 3134 3431 2e36 372c 2d35 3237 2e36 3320 1441.67,-527.63 \n+0000c100: 3134 3332 2e32 342c 2d35 3232 2e38 3120 1432.24,-522.81 \n+0000c110: 3134 3331 2e32 392c 2d35 3239 2e37 3422 1431.29,-529.74\"\n+0000c120: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />.</g>.<!-- mod\n+0000c130: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0000c140: 6d6f 6475 6c61 7273 696d 756c 6174 6f72 modularsimulator\n+0000c150: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0000c160: 7372 635f 6772 6f6d 6163 735f 6d64 7479 src_gromacs_mdty\n+0000c170: 7065 7320 2d2d 3e0a 3c67 2069 643d 2265 pes -->.<g id=\"e\n+0000c180: 6467 6535 3922 2063 6c61 7373 3d22 6564 dge59\" class=\"ed\n+0000c190: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n+0000c1a0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+0000c1b0: 6f64 756c 6172 7369 6d75 6c61 746f 7226 odularsimulator&\n+0000c1c0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+0000c1d0: 7263 5f67 726f 6d61 6373 5f6d 6474 7970 rc_gromacs_mdtyp\n+0000c1e0: 6573 3c2f 7469 746c 653e 0a3c 7061 7468 es...<\n+0000c310: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>..<\n+0000c4f0: 6720 6964 3d22 6e6f 6465 3239 2220 636c g id=\"node29\" cl\n+0000c500: 6173 733d 226e 6f64 6522 3e0a 3c74 6974 ass=\"node\">.module_src_gr\n+0000c520: 6f6d 6163 735f 6e62 6e78 6d3c 2f74 6974 omacs_nbnxm...\n+0000c640: 6e62 6e78 6d3c 2f74 6578 743e 0a3c 2f61 nbnxm......mo\n+0000c6d0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000c6e0: 5f6d 6f64 756c 6172 7369 6d75 6c61 746f _modularsimulato\n+0000c6f0: 7226 2334 353b 2667 743b 6d6f 6475 6c65 r->module\n+0000c700: 5f73 7263 5f67 726f 6d61 6373 5f6e 626e _src_gromacs_nbn\n+0000c710: 786d 3c2f 7469 746c 653e 0a3c 7061 7468 xm....<\n+0000c880: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+0000c890: 726f 6d61 6373 5f6d 6f64 756c 6172 7369 romacs_modularsi\n+0000c8a0: 6d75 6c61 746f 7226 2334 353b 2667 743b mulator->\n+0000c8b0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000c8c0: 6373 5f65 7761 6c64 202d 2d3e 0a3c 6720 cs_ewald -->..module_src_grom\n+0000c900: 6163 735f 6d6f 6475 6c61 7273 696d 756c acs_modularsimul\n+0000c910: 6174 6f72 2623 3435 3b26 6774 3b6d 6f64 ator->mod\n+0000c920: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0000c930: 6577 616c 643c 2f74 6974 6c65 3e0a 3c70 ewald.....\n+0000cad0: 3c67 2069 643d 2265 6467 6536 3722 2063 .module_src_g\n+0000cb00: 726f 6d61 6373 5f6d 6f64 756c 6172 7369 romacs_modularsi\n+0000cb10: 6d75 6c61 746f 7226 2334 353b 2667 743b mulator->\n+0000cb20: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000cb30: 6373 5f6c 6973 7465 645f 666f 7263 6573 cs_listed_forces\n+0000cb40: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ..\n+0000cc20: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....module\n+0000cd10: 5f73 7263 5f67 726f 6d61 6373 5f6d 6f64 _src_gromacs_mod\n+0000cd20: 756c 6172 7369 6d75 6c61 746f 7226 2334 ularsimulator\n+0000cd30: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+0000cd40: 5f67 726f 6d61 6373 5f6d 6472 756e 3c2f _gromacs_mdrun</\n+0000cd50: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+0000cd60: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+0000cd70: 2272 6564 2220 643d 224d 3939 352e 3938 \"red\" d=\"M995.98\n+0000cd80: 2c2d 3435 352e 3831 4339 3835 2e38 2c2d ,-455.81C985.8,-\n+0000cd90: 3431 352e 3934 2039 3637 2e37 352c 2d32 415.94 967.75,-2\n+0000cda0: 3932 2e39 3820 3936 342e 3139 2c2d 3234 92.98 964.19,-24\n+0000cdb0: 312e 3738 222f 3e0a 3c70 6f6c 7967 6f6e 1.78\"/>.<polygon\n+0000cdc0: 2066 696c 6c3d 2272 6564 2220 7374 726f fill=\"red\" stro\n+0000cdd0: 6b65 3d22 7265 6422 2070 6f69 6e74 733d ke=\"red\" points=\n+0000cde0: 2239 3637 2e36 382c 2d32 3431 2e35 3320 \"967.68,-241.53 \n+0000cdf0: 3936 332e 3635 2c2d 3233 312e 3733 2039 963.65,-231.73 9\n+0000ce00: 3630 2e36 392c 2d32 3431 2e39 3120 3936 60.69,-241.91 96\n+0000ce10: 372e 3638 2c2d 3234 312e 3533 222f 3e0a 7.68,-241.53\"/>.\n+0000ce20: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+0000ce30: 5f73 7263 5f67 726f 6d61 6373 5f6d 6f64 _src_gromacs_mod\n+0000ce40: 756c 6172 7369 6d75 6c61 746f 7226 2334 ularsimulator\n+0000ce50: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+0000ce60: 5f67 726f 6d61 6373 5f72 616e 646f 6d20 _gromacs_random \n+0000ce70: 2d2d 3e0a 3c67 2069 643d 2265 6467 6536 -->.<g id=\"edge6\n+0000ce80: 3122 2063 6c61 7373 3d22 6564 6765 223e 1\" class=\"edge\">\n+0000ce90: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+0000cea0: 7263 5f67 726f 6d61 6373 5f6d 6f64 756c rc_gromacs_modul\n+0000ceb0: 6172 7369 6d75 6c61 746f 7226 2334 353b arsimulator-\n+0000cec0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+0000ced0: 726f 6d61 6373 5f72 616e 646f 6d3c 2f74 romacs_random</t\n+0000cee0: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+0000cef0: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n+0000cf00: 626c 6163 6b22 2073 7472 6f6b 652d 6461 black\" stroke-da\n+0000cf10: 7368 6172 7261 793d 2235 2c32 2220 643d sharray=\"5,2\" d=\n+0000cf20: 224d 3130 3634 2e38 332c 2d34 3636 2e38 \"M1064.83,-466.8\n+0000cf30: 3543 3132 3238 2e35 372c 2d34 3632 2e31 5C1228.57,-462.1\n+0000cf40: 3820 3136 3630 2e34 332c 2d34 3437 2e35 8 1660.43,-447.5\n+0000cf50: 3920 3138 3031 2c2d 3432 302e 3039 2031 9 1801,-420.09 1\n+0000cf60: 3937 322e 3238 2c2d 3338 362e 3538 2032 972.28,-386.58 2\n+0000cf70: 3031 392e 3531 2c2d 3337 372e 3431 2032 019.51,-377.41 2\n+0000cf80: 3137 332c 2d32 3934 2e33 3520 3232 3132 173,-294.35 2212\n+0000cf90: 2e37 372c 2d32 3732 2e38 3320 3232 3234 .77,-272.83 2224\n+0000cfa0: 2e34 2c2d 3236 362e 3531 2032 3235 332c .4,-266.51 2253,\n+0000cfb0: 2d32 3331 2e34 3820 3232 3831 2e32 322c -231.48 2281.22,\n+0000cfc0: 2d31 3936 2e39 3220 3232 3634 2e31 342c -196.92 2264.14,\n+0000cfd0: 2d31 3730 2e38 2032 3239 382c 2d31 3431 -170.8 2298,-141\n+0000cfe0: 2e37 3420 3233 3238 2e30 382c 2d31 3135 .74 2328.08,-115\n+0000cff0: 2e39 3320 3233 3732 2e31 332c 2d31 3033 .93 2372.13,-103\n+0000d000: 2e38 3220 3234 3034 2e37 322c 2d39 382e .82 2404.72,-98.\n+0000d010: 3137 222f 3e0a 3c70 6f6c 7967 6f6e 2066 17\"/>.<polygon f\n+0000d020: 696c 6c3d 2262 6c61 636b 2220 7374 726f ill=\"black\" stro\n+0000d030: 6b65 3d22 626c 6163 6b22 2070 6f69 6e74 ke=\"black\" point\n+0000d040: 733d 2232 3430 352e 3534 2c2d 3130 312e s=\"2405.54,-101.\n+0000d050: 3539 2032 3431 342e 3837 2c2d 3936 2e35 59 2414.87,-96.5\n+0000d060: 3620 3234 3034 2e34 342c 2d39 342e 3637 6 2404.44,-94.67\n+0000d070: 2032 3430 352e 3534 2c2d 3130 312e 3539 2405.54,-101.59\n+0000d080: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n+0000d090: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000d0a0: 5f6d 6f64 756c 6172 7369 6d75 6c61 746f _modularsimulato\n+0000d0b0: 7226 2334 353b 2667 743b 6d6f 6475 6c65 r->module\n+0000d0c0: 5f73 7263 5f67 726f 6d61 6373 5f63 6f6d _src_gromacs_com\n+0000d0d0: 7061 7420 2d2d 3e0a 3c67 2069 643d 2265 pat -->.<g id=\"e\n+0000d0e0: 6467 6536 3022 2063 6c61 7373 3d22 6564 dge60\" class=\"ed\n+0000d0f0: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n+0000d100: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+0000d110: 6f64 756c 6172 7369 6d75 6c61 746f 7226 odularsimulator&\n+0000d120: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+0000d130: 7263 5f67 726f 6d61 6373 5f63 6f6d 7061 rc_gromacs_compa\n+0000d140: 743c 2f74 6974 6c65 3e0a 3c70 6174 6820 t......<\n+0000d300: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+0000d310: 5f67 726f 6d61 6373 5f6d 6f64 756c 6172 _gromacs_modular\n+0000d320: 7369 6d75 6c61 746f 7226 2334 353b 2667 simulator-&g\n+0000d330: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0000d340: 6d61 6373 5f63 6f6d 6d61 6e64 6c69 6e65 macs_commandline\n+0000d350: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......m\n+0000d4f0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000d500: 735f 6d6f 6475 6c61 7273 696d 756c 6174 s_modularsimulat\n+0000d510: 6f72 2623 3435 3b26 6774 3b6d 6f64 756c or->modul\n+0000d520: 655f 7372 635f 6772 6f6d 6163 735f 6770 e_src_gromacs_gp\n+0000d530: 755f 7574 696c 733c 2f74 6974 6c65 3e0a u_utils.\n+0000d540: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .....m\n+0000d910: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000d920: 735f 6d6f 6475 6c61 7273 696d 756c 6174 s_modularsimulat\n+0000d930: 6f72 2623 3435 3b26 6774 3b6d 6f64 756c or->modul\n+0000d940: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n+0000d950: 736b 6173 7369 676e 6d65 6e74 3c2f 7469 skassignment</ti\n+0000d960: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+0000d970: 226e 6f6e 6522 2073 7472 6f6b 653d 2272 \"none\" stroke=\"r\n+0000d980: 6564 2220 643d 224d 3935 352e 3237 2c2d ed\" d=\"M955.27,-\n+0000d990: 3435 392e 3933 4338 3936 2e33 362c 2d34 459.93C896.36,-4\n+0000d9a0: 3438 2e38 3720 3739 342e 312c 2d34 3239 48.87 794.1,-429\n+0000d9b0: 2e36 3620 3733 312e 3331 2c2d 3431 372e .66 731.31,-417.\n+0000d9c0: 3836 222f 3e0a 3c70 6f6c 7967 6f6e 2066 86\"/>.<polygon f\n+0000d9d0: 696c 6c3d 2272 6564 2220 7374 726f 6b65 ill=\"red\" stroke\n+0000d9e0: 3d22 7265 6422 2070 6f69 6e74 733d 2237 =\"red\" points=\"7\n+0000d9f0: 3331 2e36 382c 2d34 3134 2e33 3720 3732 31.68,-414.37 72\n+0000da00: 312e 322c 2d34 3135 2e39 3620 3733 302e 1.2,-415.96 730.\n+0000da10: 3338 2c2d 3432 312e 3235 2037 3331 2e36 38,-421.25 731.6\n+0000da20: 382c 2d34 3134 2e33 3722 2f3e 0a3c 2f67 8,-414.37\"/>.</g\n+0000da30: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+0000da40: 635f 6772 6f6d 6163 735f 6d6f 6475 6c61 c_gromacs_modula\n+0000da50: 7273 696d 756c 6174 6f72 2623 3435 3b26 rsimulator-&\n+0000da60: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+0000da70: 6f6d 6163 735f 6d64 7275 6e75 7469 6c69 omacs_mdrunutili\n+0000da80: 7479 202d 2d3e 0a3c 6720 6964 3d22 6564 ty -->.<g id=\"ed\n+0000da90: 6765 3638 2220 636c 6173 733d 2265 6467 ge68\" class=\"edg\n+0000daa0: 6522 3e0a 3c74 6974 6c65 3e6d 6f64 756c e\">.<title>modul\n+0000dab0: 655f 7372 635f 6772 6f6d 6163 735f 6d6f e_src_gromacs_mo\n+0000dac0: 6475 6c61 7273 696d 756c 6174 6f72 2623 dularsimulator&#\n+0000dad0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+0000dae0: 635f 6772 6f6d 6163 735f 6d64 7275 6e75 c_gromacs_mdrunu\n+0000daf0: 7469 6c69 7479 3c2f 7469 746c 653e 0a3c tility.<\n+0000db00: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+0000db10: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n+0000db20: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n+0000db30: 6179 3d22 352c 3222 2064 3d22 4d31 3030 ay=\"5,2\" d=\"M100\n+0000db40: 312e 342c 2d34 3833 2e31 3743 3130 3032 1.4,-483.17C1002\n+0000db50: 2e33 2c2d 3530 372e 3537 2031 3030 352c .3,-507.57 1005,\n+0000db60: 2d35 3632 2e37 3920 3130 3132 2c2d 3630 -562.79 1012,-60\n+0000db70: 382e 3720 3130 3133 2e33 2c2d 3631 372e 8.7 1013.3,-617.\n+0000db80: 3234 2031 3031 352e 3237 2c2d 3632 362e 24 1015.27,-626.\n+0000db90: 3520 3130 3137 2e31 382c 2d36 3334 2e36 5 1017.18,-634.6\n+0000dba0: 3322 2f3e 0a3c 706f 6c79 676f 6e20 6669 3\"/>.....\n+0000dc80: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+0000dc90: 635f 6772 6f6d 6163 735f 7075 6c6c 696e c_gromacs_pullin\n+0000dca0: 6726 2334 353b 2667 743b 6d6f 6475 6c65 g->module\n+0000dcb0: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+0000dcc0: 6c69 623c 2f74 6974 6c65 3e0a 3c70 6174 lib...\n+0000de70: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...mo\n+0000dee0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000def0: 5f70 756c 6c69 6e67 2623 3435 3b26 6774 _pulling->\n+0000df00: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+0000df10: 6163 735f 6d64 6c69 623c 2f74 6974 6c65 acs_mdlib</title\n+0000df20: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+0000df30: 6e65 2220 7374 726f 6b65 3d22 2362 6662 ne\" stroke=\"#bfb\n+0000df40: 6662 6622 2064 3d22 4d31 3235 392e 3433 fbf\" d=\"M1259.43\n+0000df50: 2c2d 3136 332e 3743 3133 3031 2e39 342c ,-163.7C1301.94,\n+0000df60: 2d31 3738 2e34 3920 3133 3835 2c2d 3231 -178.49 1385,-21\n+0000df70: 352e 3620 3133 3835 2c2d 3237 392e 3932 5.6 1385,-279.92\n+0000df80: 2031 3338 352c 2d34 3037 2e36 3620 3133 1385,-407.66 13\n+0000df90: 3835 2c2d 3430 372e 3636 2031 3338 352c 85,-407.66 1385,\n+0000dfa0: 2d34 3037 2e36 3620 3133 3835 2c2d 3439 -407.66 1385,-49\n+0000dfb0: 362e 3932 2031 3331 372e 3733 2c2d 3439 6.92 1317.73,-49\n+0000dfc0: 382e 3738 2031 3238 352c 2d35 3831 2e38 8.78 1285,-581.8\n+0000dfd0: 3320 3132 3630 2e34 382c 2d36 3434 2e30 3 1260.48,-644.0\n+0000dfe0: 3520 3132 3436 2e37 332c 2d37 3232 2e33 5 1246.73,-722.3\n+0000dff0: 3720 3132 3431 2e30 382c 2d37 3630 2e32 7 1241.08,-760.2\n+0000e000: 3722 2f3e 0a3c 706f 6c79 676f 6e20 6669 7\"/>.<polygon fi\n+0000e010: 6c6c 3d22 2362 6662 6662 6622 2073 7472 ll=\"#bfbfbf\" str\n+0000e020: 6f6b 653d 2223 6266 6266 6266 2220 706f oke=\"#bfbfbf\" po\n+0000e030: 696e 7473 3d22 3132 3337 2e36 312c 2d37 ints=\"1237.61,-7\n+0000e040: 3539 2e38 3620 3132 3339 2e36 342c 2d37 59.86 1239.64,-7\n+0000e050: 3730 2e32 3620 3132 3434 2e35 342c 2d37 70.26 1244.54,-7\n+0000e060: 3630 2e38 3620 3132 3337 2e36 312c 2d37 60.86 1237.61,-7\n+0000e070: 3539 2e38 3622 2f3e 0a3c 2f67 3e0a 3c21 59.86\"/>.</g>.<!\n+0000e080: 2d2d 206d 6f64 756c 655f 7372 635f 6772 -- module_src_gr\n+0000e090: 6f6d 6163 735f 7075 6c6c 696e 6726 2334 omacs_pulling\n+0000e0a0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+0000e0b0: 5f67 726f 6d61 6373 5f66 696c 6569 6f20 _gromacs_fileio \n+0000e0c0: 2d2d 3e0a 3c67 2069 643d 2265 6467 6537 -->.<g id=\"edge7\n+0000e0d0: 3322 2063 6c61 7373 3d22 6564 6765 223e 3\" class=\"edge\">\n+0000e0e0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+0000e0f0: 7263 5f67 726f 6d61 6373 5f70 756c 6c69 rc_gromacs_pulli\n+0000e100: 6e67 2623 3435 3b26 6774 3b6d 6f64 756c ng->modul\n+0000e110: 655f 7372 635f 6772 6f6d 6163 735f 6669 e_src_gromacs_fi\n+0000e120: 6c65 696f 3c2f 7469 746c 653e 0a3c 7061 leio......module_src_grom\n+0000e4e0: 6163 735f 7075 6c6c 696e 6726 2334 353b acs_pulling-\n+0000e4f0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+0000e500: 726f 6d61 6373 5f64 6f6d 6465 633c 2f74 romacs_domdec..<\n+0000e5c0: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n+0000e5d0: 3832 6663 6322 2073 7472 6f6b 653d 2223 82fcc\" stroke=\"#\n+0000e5e0: 3238 3266 6363 2220 706f 696e 7473 3d22 282fcc\" points=\"\n+0000e5f0: 3630 312e 3032 2c2d 3236 372e 3537 2035 601.02,-267.57 5\n+0000e600: 3932 2e30 322c 2d32 3733 2e31 3620 3630 92.02,-273.16 60\n+0000e610: 322e 3534 2c2d 3237 342e 3431 2036 3031 2.54,-274.41 601\n+0000e620: 2e30 322c 2d32 3637 2e35 3722 2f3e 0a3c .02,-267.57\"/>.<\n+0000e630: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>..<\n+0000e680: 6720 6964 3d22 6564 6765 3732 2220 636c g id=\"edge72\" cl\n+0000e690: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.module_src_gr\n+0000e6b0: 6f6d 6163 735f 7075 6c6c 696e 6726 2334 omacs_pulling\n+0000e6c0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+0000e6d0: 5f67 726f 6d61 6373 5f63 6f6d 6d61 6e64 _gromacs_command\n+0000e6e0: 6c69 6e65 3c2f 7469 746c 653e 0a3c 7061 line......modu\n+0000e8d0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f70 le_src_gromacs_p\n+0000e8e0: 756c 6c69 6e67 2623 3435 3b26 6774 3b6d ulling->m\n+0000e8f0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000e900: 735f 6d64 7275 6e75 7469 6c69 7479 3c2f s_mdrunutility</\n+0000e910: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+0000e920: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+0000e930: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n+0000e940: 2d64 6173 6861 7272 6179 3d22 352c 3222 -dasharray=\"5,2\"\n+0000e950: 2064 3d22 4d31 3233 332e 332c 2d31 3638 d=\"M1233.3,-168\n+0000e960: 2e38 4331 3233 302e 3435 2c2d 3139 312e .8C1230.45,-191.\n+0000e970: 3135 2031 3232 352c 2d32 3339 2e31 3820 15 1225,-239.18 \n+0000e980: 3132 3235 2c2d 3237 392e 3932 2031 3232 1225,-279.92 122\n+0000e990: 352c 2d33 3434 2e37 3920 3132 3235 2c2d 5,-344.79 1225,-\n+0000e9a0: 3334 342e 3739 2031 3232 352c 2d33 3434 344.79 1225,-344\n+0000e9b0: 2e37 3920 3132 3235 2c2d 3436 372e 3335 .79 1225,-467.35\n+0000e9c0: 2031 3232 372e 3937 2c2d 3531 382e 3439 1227.97,-518.49\n+0000e9d0: 2031 3134 352c 2d36 3038 2e37 2031 3132 1145,-608.7 112\n+0000e9e0: 362e 3135 2c2d 3632 392e 3139 2031 3039 6.15,-629.19 109\n+0000e9f0: 372e 3531 2c2d 3634 312e 3136 2031 3037 7.51,-641.16 107\n+0000ea00: 322e 3731 2c2d 3634 382e 3037 222f 3e0a 2.71,-648.07\"/>.\n+0000ea10: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 <polygon fill=\"#\n+0000ea20: 3238 3266 6363 2220 7374 726f 6b65 3d22 282fcc\" stroke=\"\n+0000ea30: 2332 3832 6663 6322 2070 6f69 6e74 733d #282fcc\" points=\n+0000ea40: 2231 3037 312e 3533 2c2d 3634 342e 3736 \"1071.53,-644.76\n+0000ea50: 2031 3036 322e 3732 2c2d 3635 302e 3634 1062.72,-650.64\n+0000ea60: 2031 3037 332e 3238 2c2d 3635 312e 3533 1073.28,-651.53\n+0000ea70: 2031 3037 312e 3533 2c2d 3634 342e 3736 1071.53,-644.76\n+0000ea80: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n+0000ea90: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000eaa0: 5f74 696d 696e 6720 2d2d 3e0a 3c67 2069 _timing -->.<g i\n+0000eab0: 643d 226e 6f64 6532 3022 2063 6c61 7373 d=\"node20\" class\n+0000eac0: 3d22 6e6f 6465 223e 0a3c 7469 746c 653e =\"node\">.<title>\n+0000ead0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000eae0: 6373 5f74 696d 696e 673c 2f74 6974 6c65 cs_timing</title\n+0000eaf0: 3e0a 3c65 6c6c 6970 7365 2066 696c 6c3d >.<ellipse fill=\n+0000eb00: 2223 6266 6266 6266 2220 7374 726f 6b65 \"#bfbfbf\" stroke\n+0000eb10: 3d22 626c 6163 6b22 2063 783d 2231 3032 =\"black\" cx=\"102\n+0000eb20: 3222 2063 793d 222d 3930 392e 3632 2220 2\" cy=\"-909.62\" \n+0000eb30: 7278 3d22 3330 2e33 3122 2072 793d 2231 rx=\"30.31\" ry=\"1\n+0000eb40: 332e 3337 222f 3e0a 3c74 6578 7420 7465 3.37\"/>.<text te\n+0000eb50: 7874 2d61 6e63 686f 723d 226d 6964 646c xt-anchor=\"middl\n+0000eb60: 6522 2078 3d22 3130 3232 2220 793d 222d e\" x=\"1022\" y=\"-\n+0000eb70: 3930 372e 3132 2220 666f 6e74 2d66 616d 907.12\" font-fam\n+0000eb80: 696c 793d 2246 7265 6553 616e 7322 2066 ily=\"FreeSans\" f\n+0000eb90: 6f6e 742d 7369 7a65 3d22 3130 2e30 3022 ont-size=\"10.00\"\n+0000eba0: 3e74 696d 696e 673c 2f74 6578 743e 0a3c >timing</text>.<\n+0000ebb0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.<!-- module_\n+0000ebc0: 7372 635f 6772 6f6d 6163 735f 7469 6d69 src_gromacs_timi\n+0000ebd0: 6e67 2623 3435 3b26 6774 3b6d 6f64 756c ng->modul\n+0000ebe0: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n+0000ebf0: 7479 7065 7320 2d2d 3e0a 3c67 2069 643d types -->.<g id=\n+0000ec00: 2265 6467 6537 3922 2063 6c61 7373 3d22 \"edge79\" class=\"\n+0000ec10: 6564 6765 223e 0a3c 7469 746c 653e 6d6f edge\">.<title>mo\n+0000ec20: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000ec30: 5f74 696d 696e 6726 2334 353b 2667 743b _timing->\n+0000ec40: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000ec50: 6373 5f6d 6474 7970 6573 3c2f 7469 746c cs_mdtypes</titl\n+0000ec60: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0000ec70: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+0000ec80: 6266 6266 2220 643d 224d 3130 3234 2e34 bfbf\" d=\"M1024.4\n+0000ec90: 392c 2d38 3936 4331 3032 352e 3935 2c2d 9,-896C1025.95,-\n+0000eca0: 3838 382e 3538 2031 3032 372e 3835 2c2d 888.58 1027.85,-\n+0000ecb0: 3837 382e 3936 2031 3032 392e 3536 2c2d 878.96 1029.56,-\n+0000ecc0: 3837 302e 3237 222f 3e0a 3c70 6f6c 7967 870.27\"/>.<polyg\n+0000ecd0: 6f6e 2066 696c 6c3d 2223 6266 6266 6266 on fill=\"#bfbfbf\n+0000ece0: 2220 7374 726f 6b65 3d22 2362 6662 6662 \" stroke=\"#bfbfb\n+0000ecf0: 6622 2070 6f69 6e74 733d 2231 3033 332e f\" points=\"1033.\n+0000ed00: 3032 2c2d 3837 302e 3833 2031 3033 312e 02,-870.83 1031.\n+0000ed10: 3532 2c2d 3836 302e 3334 2031 3032 362e 52,-860.34 1026.\n+0000ed20: 3135 2c2d 3836 392e 3438 2031 3033 332e 15,-869.48 1033.\n+0000ed30: 3032 2c2d 3837 302e 3833 222f 3e0a 3c2f 02,-870.83\"/>.</\n+0000ed40: 673e 0a3c 212d 2d20 6d6f 6475 6c65 5f73 g>.<!-- module_s\n+0000ed50: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+0000ed60: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0000ed70: 7372 635f 6772 6f6d 6163 735f 696d 6420 src_gromacs_imd \n+0000ed80: 2d2d 3e0a 3c67 2069 643d 2265 6467 6538 -->.<g id=\"edge8\n+0000ed90: 3822 2063 6c61 7373 3d22 6564 6765 223e 8\" class=\"edge\">\n+0000eda0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+0000edb0: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+0000edc0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0000edd0: 7372 635f 6772 6f6d 6163 735f 696d 643c src_gromacs_imd<\n+0000ede0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+0000edf0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+0000ee00: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n+0000ee10: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n+0000ee20: 2220 643d 224d 3132 3135 2e34 342c 2d37 \" d=\"M1215.44,-7\n+0000ee30: 3735 2e35 3343 3131 3838 2e37 372c 2d37 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6961 6c64 796e 616d 6963 7320 2d2d 3e0a ialdynamics -->.\n+0000ef30: 3c67 2069 643d 2265 6467 6538 3622 2063 <g id=\"edge86\" c\n+0000ef40: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.<ti\n+0000ef50: 746c 653e 6d6f 6475 6c65 5f73 7263 5f67 tle>module_src_g\n+0000ef60: 726f 6d61 6373 5f6d 646c 6962 2623 3435 romacs_mdlib-\n+0000ef70: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+0000ef80: 6772 6f6d 6163 735f 6573 7365 6e74 6961 gromacs_essentia\n+0000ef90: 6c64 796e 616d 6963 733c 2f74 6974 6c65 ldynamics</title\n+0000efa0: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+0000efb0: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n+0000efc0: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n+0000efd0: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n+0000efe0: 3132 3039 2e38 352c 2d37 3831 2e38 4331 1209.85,-781.8C1\n+0000eff0: 3131 372e 3933 2c2d 3737 372e 3820 3833 117.93,-777.8 83\n+0000f000: 322e 3031 2c2d 3736 322e 3533 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mod\n+0000f0f0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0000f100: 6d64 6c69 6226 2334 353b 2667 743b 6d6f mdlib->mo\n+0000f110: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000f120: 5f67 6d78 6c69 6220 2d2d 3e0a 3c67 2069 _gmxlib -->.<g i\n+0000f130: 643d 2265 6467 6538 3022 2063 6c61 7373 d=\"edge80\" class\n+0000f140: 3d22 6564 6765 223e 0a3c 7469 746c 653e =\"edge\">.<title>\n+0000f150: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000f160: 6373 5f6d 646c 6962 2623 3435 3b26 6774 cs_mdlib->\n+0000f170: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+0000f180: 6163 735f 676d 786c 6962 3c2f 7469 746c acs_gmxlib</titl\n+0000f190: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0000f1a0: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+0000f1b0: 6266 6266 2220 643d 224d 3132 3230 2e31 bfbf\" d=\"M1220.1\n+0000f1c0: 312c 2d37 3934 2e35 3643 3131 3939 2e31 1,-794.56C1199.1\n+0000f1d0: 322c 2d38 3033 2e37 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837.26,-903.27\n+0000f2c0: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n+0000f2d0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000f2e0: 5f6d 646c 6962 2623 3435 3b26 6774 3b6d _mdlib->m\n+0000f2f0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000f300: 735f 7461 626c 6573 202d 2d3e 0a3c 6720 s_tables -->.<g \n+0000f310: 6964 3d22 6564 6765 3833 2220 636c 6173 id=\"edge83\" clas\n+0000f320: 733d 2265 6467 6522 3e0a 3c74 6974 6c65 s=\"edge\">.<title\n+0000f330: 3e6d 6f64 756c 655f 7372 635f 6772 6f6d >module_src_grom\n+0000f340: 6163 735f 6d64 6c69 6226 2334 353b 2667 acs_mdlib-&g\n+0000f350: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0000f360: 6d61 6373 5f74 6162 6c65 733c 2f74 6974 macs_tables</tit\n+0000f370: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+0000f380: 6e6f 6e65 2220 7374 726f 6b65 3d22 2332 none\" stroke=\"#2\n+0000f390: 3832 6663 6322 2073 7472 6f6b 652d 6461 82fcc\" stroke-da\n+0000f3a0: 7368 6172 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3732 9.6,-114.15 2172\n+0000f490: 2e38 382c 2d31 3035 2e39 3620 3231 3733 .88,-105.96 2173\n+0000f4a0: 2e30 332c 2d31 3136 2e35 3520 3231 3739 .03,-116.55 2179\n+0000f4b0: 2e36 2c2d 3131 342e 3135 222f 3e0a 3c2f .6,-114.15\"/>.</\n+0000f4c0: 673e 0a3c 212d 2d20 6d6f 6475 6c65 5f73 g>.<!-- module_s\n+0000f4d0: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+0000f4e0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0000f4f0: 7372 635f 6772 6f6d 6163 735f 7472 616a src_gromacs_traj\n+0000f500: 6563 746f 7279 202d 2d3e 0a3c 6720 6964 ectory -->.<g id\n+0000f510: 3d22 6564 6765 3938 2220 636c 6173 733d =\"edge98\" class=\n+0000f520: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+0000f530: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000f540: 735f 6d64 6c69 6226 2334 353b 2667 743b s_mdlib->\n+0000f550: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000f560: 6373 5f74 7261 6a65 6374 6f72 793c 2f74 cs_trajectory</t\n+0000f570: 6974 6c65 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6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000f750: 5f6d 646c 6962 2623 3435 3b26 6774 3b6d _mdlib->m\n+0000f760: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000f770: 735f 6861 7264 7761 7265 3c2f 7469 746c s_hardware</titl\n+0000f780: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0000f790: 6f6e 6522 2073 7472 6f6b 653d 2272 6564 one\" stroke=\"red\n+0000f7a0: 2220 643d 224d 3132 3338 2e34 382c 2d37 \" d=\"M1238.48,-7\n+0000f7b0: 3937 2e33 3743 3132 3339 2e33 392c 2d38 97.37C1239.39,-8\n+0000f7c0: 3430 2e33 3320 3132 3336 2e30 332c 2d39 40.33 1236.03,-9\n+0000f7d0: 3832 2e39 3420 3131 3536 2c2d 3130 3438 82.94 1156,-1048\n+0000f7e0: 2e37 3920 3131 3430 2e36 342c 2d31 3036 .79 1140.64,-106\n+0000f7f0: 312e 3433 2038 3637 2e35 342c 2d31 3038 1.43 867.54,-108\n+0000f800: 342e 3436 2037 3534 2e39 332c 2d31 3039 4.46 754.93,-109\n+0000f810: 332e 3437 222f 3e0a 3c70 6f6c 7967 6f6e 3.47\"/>.<polygon\n+0000f820: 2066 696c 6c3d 2272 6564 2220 7374 726f fill=\"red\" stro\n+0000f830: 6b65 3d22 7265 6422 2070 6f69 6e74 733d ke=\"red\" points=\n+0000f840: 2237 3534 2e35 362c 2d31 3038 392e 3939 \"754.56,-1089.99\n+0000f850: 2037 3434 2e38 372c 2d31 3039 342e 3237 744.87,-1094.27\n+0000f860: 2037 3535 2e31 312c 2d31 3039 362e 3937 755.11,-1096.97\n+0000f870: 2037 3534 2e35 362c 2d31 3038 392e 3939 754.56,-1089.99\n+0000f880: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n+0000f890: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0000f8a0: 5f6d 646c 6962 2623 3435 3b26 6774 3b6d _mdlib->m\n+0000f8b0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000f8c0: 735f 6669 6c65 696f 202d 2d3e 0a3c 6720 s_fileio -->.<g \n+0000f8d0: 6964 3d22 6564 6765 3932 2220 636c 6173 id=\"edge92\" clas\n+0000f8e0: 733d 2265 6467 6522 3e0a 3c74 6974 6c65 s=\"edge\">.<title\n+0000f8f0: 3e6d 6f64 756c 655f 7372 635f 6772 6f6d >module_src_grom\n+0000f900: 6163 735f 6d64 6c69 6226 2334 353b 2667 acs_mdlib-&g\n+0000f910: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0000f920: 6d61 6373 5f66 696c 6569 6f3c 2f74 6974 macs_fileio</tit\n+0000f930: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+0000f940: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n+0000f950: 6662 6662 6622 2064 3d22 4d31 3236 342e fbfbf\" d=\"M1264.\n+0000f960: 3937 2c2d 3737 392e 3339 4331 3334 352e 97,-779.39C1345.\n+0000f970: 3932 2c2d 3736 382e 3334 2031 3538 332e 92,-768.34 1583.\n+0000f980: 3937 2c2d 3733 312e 3231 2031 3632 392c 97,-731.21 1629,\n+0000f990: 2d36 3731 2e35 3720 3136 3336 2e32 2c2d -671.57 1636.2,-\n+0000f9a0: 3636 322e 3034 2031 3633 362e 3239 2c2d 662.04 1636.29,-\n+0000f9b0: 3635 342e 3136 2031 3632 392c 2d36 3434 654.16 1629,-644\n+0000f9c0: 2e37 2031 3539 302e 3535 2c2d 3539 342e .7 1590.55,-594.\n+0000f9d0: 3835 2031 3533 372e 3931 2c2d 3635 312e 85 1537.91,-651.\n+0000f9e0: 3738 2031 3439 322c 2d36 3038 2e37 2031 78 1492,-608.7 1\n+0000f9f0: 3437 372e 352c 2d35 3935 2e30 3920 3134 477.5,-595.09 14\n+0000fa00: 3731 2e34 2c2d 3537 322e 3838 2031 3436 71.4,-572.88 146\n+0000fa10: 382e 3834 2c2d 3535 362e 3122 2f3e 0a3c 8.84,-556.1\"/>.<\n+0000fa20: 706f 6c79 676f 6e20 6669 6c6c 3d22 2362 polygon fill=\"#b\n+0000fa30: 6662 6662 6622 2073 7472 6f6b 653d 2223 fbfbf\" stroke=\"#\n+0000fa40: 6266 6266 6266 2220 706f 696e 7473 3d22 bfbfbf\" points=\"\n+0000fa50: 3134 3732 2e33 2c2d 3535 352e 3531 2031 1472.3,-555.51 1\n+0000fa60: 3436 372e 3632 2c2d 3534 3620 3134 3635 467.62,-546 1465\n+0000fa70: 2e33 352c 2d35 3536 2e33 3520 3134 3732 .35,-556.35 1472\n+0000fa80: 2e33 2c2d 3535 352e 3531 222f 3e0a 3c2f .3,-555.51\"/>.</\n+0000fa90: 673e 0a3c 212d 2d20 6d6f 6475 6c65 5f73 g>.<!-- module_s\n+0000faa0: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+0000fab0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0000fac0: 7372 635f 6772 6f6d 6163 735f 6d64 7479 src_gromacs_mdty\n+0000fad0: 7065 7320 2d2d 3e0a 3c67 2069 643d 2265 pes -->.<g id=\"e\n+0000fae0: 6467 6538 3222 2063 6c61 7373 3d22 6564 dge82\" class=\"ed\n+0000faf0: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n+0000fb00: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+0000fb10: 646c 6962 2623 3435 3b26 6774 3b6d 6f64 dlib->mod\n+0000fb20: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0000fb30: 6d64 7479 7065 733c 2f74 6974 6c65 3e0a mdtypes.\n+0000fb40: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .....m\n+0000fc80: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0000fc90: 735f 6d64 6c69 6226 2334 353b 2667 743b s_mdlib->\n+0000fca0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0000fcb0: 6373 5f64 6f6d 6465 633c 2f74 6974 6c65 cs_domdec</title\n+0000fcc0: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+0000fcd0: 6e65 2220 7374 726f 6b65 3d22 7265 6422 ne\" stroke=\"red\"\n+0000fce0: 2064 3d22 4d31 3230 392e 3437 2c2d 3738 d=\"M1209.47,-78\n+0000fcf0: 322e 3939 4331 3131 352e 3736 2c2d 3738 2.99C1115.76,-78\n+0000fd00: 3320 3832 302e 3031 2c2d 3737 392e 3631 3 820.01,-779.61\n+0000fd10: 2037 3339 2c2d 3733 342e 3434 2035 3939 739,-734.44 599\n+0000fd20: 2e31 352c 2d36 3536 2e34 3720 3539 332e .15,-656.47 593.\n+0000fd30: 3236 2c2d 3537 372e 3332 2035 3633 2c2d 26,-577.32 563,-\n+0000fd40: 3432 302e 3039 2035 3535 2e32 352c 2d33 420.09 555.25,-3\n+0000fd50: 3739 2e38 3220 3535 332e 3339 2c2d 3333 79.82 553.39,-33\n+0000fd60: 312e 3920 3535 352e 3637 2c2d 3330 342e 1.9 555.67,-304.\n+0000fd70: 3338 222f 3e0a 3c70 6f6c 7967 6f6e 2066 38\"/>.<polygon f\n+0000fd80: 696c 6c3d 2272 6564 2220 7374 726f 6b65 ill=\"red\" stroke\n+0000fd90: 3d22 7265 6422 2070 6f69 6e74 733d 2235 =\"red\" points=\"5\n+0000fda0: 3539 2e31 372c 2d33 3034 2e35 3820 3535 59.17,-304.58 55\n+0000fdb0: 362e 3834 2c2d 3239 342e 3234 2035 3532 6.84,-294.24 552\n+0000fdc0: 2e32 312c 2d33 3033 2e37 3720 3535 392e .21,-303.77 559.\n+0000fdd0: 3137 2c2d 3330 342e 3538 222f 3e0a 3c2f 17,-304.58\"/>.</\n+0000fde0: 673e 0a3c 212d 2d20 6d6f 6475 6c65 5f73 g>.<!-- module_s\n+0000fdf0: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+0000fe00: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0000fe10: 7372 635f 6772 6f6d 6163 735f 6e62 6e78 src_gromacs_nbnx\n+0000fe20: 6d20 2d2d 3e0a 3c67 2069 643d 2265 6467 m -->.<g id=\"edg\n+0000fe30: 6539 3122 2063 6c61 7373 3d22 6564 6765 e91\" class=\"edge\n+0000fe40: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n+0000fe50: 5f73 7263 5f67 726f 6d61 6373 5f6d 646c _src_gromacs_mdl\n+0000fe60: 6962 2623 3435 3b26 6774 3b6d 6f64 756c ib->modul\n+0000fe70: 655f 7372 635f 6772 6f6d 6163 735f 6e62 e_src_gromacs_nb\n+0000fe80: 6e78 6d3c 2f74 6974 6c65 3e0a 3c70 6174 nxm......\n+0000fff0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00010000: 6373 5f6d 646c 6962 2623 3435 3b26 6774 cs_mdlib->\n+00010010: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00010020: 6163 735f 6d64 7370 616e 3c2f 7469 746c acs_mdspan</titl\n+00010030: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00010040: 6f6e 6522 2073 7472 6f6b 653d 2272 6564 one\" stroke=\"red\n+00010050: 2220 643d 224d 3132 3636 2e33 372c 2d37 \" d=\"M1266.37,-7\n+00010060: 3832 2e36 3243 3133 3435 2e34 352c 2d37 82.62C1345.45,-7\n+00010070: 3831 2e34 3120 3135 3734 2e37 332c 2d37 81.41 1574.73,-7\n+00010080: 3734 2e34 3320 3137 3630 2c2d 3733 342e 74.43 1760,-734.\n+00010090: 3434 2031 3834 332e 3635 2c2d 3731 362e 44 1843.65,-716.\n+000100a0: 3339 2031 3837 312e 392c 2d37 3230 2e36 39 1871.9,-720.6\n+000100b0: 3620 3139 3432 2c2d 3637 312e 3537 2031 6 1942,-671.57 1\n+000100c0: 3937 392e 3538 2c2d 3634 352e 3235 2032 979.58,-645.25 2\n+000100d0: 3031 372e 3132 2c2d 3632 302e 3835 2031 017.12,-620.85 1\n+000100e0: 3939 332c 2d35 3831 2e38 3320 3139 3734 993,-581.83 1974\n+000100f0: 2e31 392c 2d35 3531 2e34 2031 3934 302e .19,-551.4 1940.\n+00010100: 3637 2c2d 3537 352e 3731 2031 3932 312c 67,-575.71 1921,\n+00010110: 2d35 3435 2e38 3320 3138 3731 2e35 382c -545.83 1871.58,\n+00010120: 2d34 3730 2e37 3520 3138 3439 2e37 392c -470.75 1849.79,\n+00010130: 2d32 3134 2e31 3920 3139 3033 2c2d 3134 -214.19 1903,-14\n+00010140: 312e 3734 2031 3934 302e 3631 2c2d 3930 1.74 1940.61,-90\n+00010150: 2e35 3320 3231 3330 2e31 2c2d 3532 2e32 .53 2130.1,-52.2\n+00010160: 3920 3232 3135 2e38 2c2d 3337 2e33 3322 9 2215.8,-37.33\"\n+00010170: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n+00010180: 3d22 7265 6422 2073 7472 6f6b 653d 2272 =\"red\" stroke=\"r\n+00010190: 6564 2220 706f 696e 7473 3d22 3232 3136 ed\" points=\"2216\n+000101a0: 2e34 362c 2d34 302e 3737 2032 3232 352e .46,-40.77 2225.\n+000101b0: 3732 2c2d 3335 2e36 3220 3232 3135 2e32 72,-35.62 2215.2\n+000101c0: 372c 2d33 332e 3837 2032 3231 362e 3436 7,-33.87 2216.46\n+000101d0: 2c2d 3430 2e37 3722 2f3e 0a3c 2f67 3e0a ,-40.77\"/>.</g>.\n+000101e0: 3c21 2d2d 206d 6f64 756c 655f 7372 635f <!-- module_src_\n+000101f0: 6772 6f6d 6163 735f 6d64 6c69 6226 2334 gromacs_mdlib\n+00010200: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00010210: 5f67 726f 6d61 6373 5f65 7761 6c64 202d _gromacs_ewald -\n+00010220: 2d3e 0a3c 6720 6964 3d22 6564 6765 3837 ->.<g id=\"edge87\n+00010230: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n+00010240: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n+00010250: 635f 6772 6f6d 6163 735f 6d64 6c69 6226 c_gromacs_mdlib&\n+00010260: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00010270: 7263 5f67 726f 6d61 6373 5f65 7761 6c64 rc_gromacs_ewald\n+00010280: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ....<\n+000103f0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00010400: 726f 6d61 6373 5f6d 646c 6962 2623 3435 romacs_mdlib-\n+00010410: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00010420: 6772 6f6d 6163 735f 6c69 7374 6564 5f66 gromacs_listed_f\n+00010430: 6f72 6365 7320 2d2d 3e0a 3c67 2069 643d orces -->..mo\n+00010460: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00010470: 5f6d 646c 6962 2623 3435 3b26 6774 3b6d _mdlib->m\n+00010480: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00010490: 735f 6c69 7374 6564 5f66 6f72 6365 733c s_listed_forces<\n+000104a0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+000104b0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+000104c0: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n+000104d0: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n+000104e0: 2220 643d 224d 3132 3636 2e33 392c 2d37 \" d=\"M1266.39,-7\n+000104f0: 3832 2e33 3943 3133 3739 2e35 2c2d 3738 82.39C1379.5,-78\n+00010500: 302e 3320 3137 3936 2e37 322c 2d37 3730 0.3 1796.72,-770\n+00010510: 2e35 2031 3932 342c 2d37 3334 2e34 3420 .5 1924,-734.44 \n+00010520: 3230 3339 2e38 362c 2d37 3031 2e36 3220 2039.86,-701.62 \n+00010530: 3231 3031 2e36 372c 2d37 3131 2e37 3320 2101.67,-711.73 \n+00010540: 3231 3634 2c2d 3630 382e 3720 3231 3834 2164,-608.7 2184\n+00010550: 2e36 352c 2d35 3734 2e35 3820 3231 3736 .65,-574.58 2176\n+00010560: 2e30 392c 2d35 3536 2e39 3720 3231 3634 .09,-556.97 2164\n+00010570: 2c2d 3531 382e 3936 2032 3134 372e 3638 ,-518.96 2147.68\n+00010580: 2c2d 3436 372e 3635 2032 3131 362e 3035 ,-467.65 2116.05\n+00010590: 2c2d 3436 392e 3231 2032 3039 342c 2d34 ,-469.21 2094,-4\n+000105a0: 3230 2e30 3920 3230 3533 2e37 332c 2d33 20.09 2053.73,-3\n+000105b0: 3330 2e34 2032 3037 372e 3932 2c2d 3239 30.4 2077.92,-29\n+000105c0: 362e 3839 2032 3034 342c 2d32 3034 2e36 6.89 2044,-204.6\n+000105d0: 3120 3230 3430 2e37 2c2d 3139 352e 3634 1 2040.7,-195.64\n+000105e0: 2032 3033 362e 3132 2c2d 3138 362e 3232 2036.12,-186.22\n+000105f0: 2032 3033 322e 3333 2c2d 3137 382e 3039 2032.33,-178.09\n+00010600: 222f 3e0a 3c70 6f6c 7967 6f6e 2066 696c \"/>.<polygon fil\n+00010610: 6c3d 2223 3238 3266 6363 2220 7374 726f l=\"#282fcc\" stro\n+00010620: 6b65 3d22 2332 3832 6663 6322 2070 6f69 ke=\"#282fcc\" poi\n+00010630: 6e74 733d 2232 3033 352e 3531 2c2d 3137 nts=\"2035.51,-17\n+00010640: 362e 3633 2032 3032 382e 3234 2c2d 3136 6.63 2028.24,-16\n+00010650: 382e 3933 2032 3032 392e 3132 2c2d 3137 8.93 2029.12,-17\n+00010660: 392e 3439 2032 3033 352e 3531 2c2d 3137 9.49 2035.51,-17\n+00010670: 362e 3633 222f 3e0a 3c2f 673e 0a3c 212d 6.63\"/>.</g>.<!-\n+00010680: 2d20 6d6f 6475 6c65 5f73 7263 5f67 726f - module_src_gro\n+00010690: 6d61 6373 5f6d 646c 6962 2623 3435 3b26 macs_mdlib-&\n+000106a0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+000106b0: 6f6d 6163 735f 7261 6e64 6f6d 202d 2d3e omacs_random -->\n+000106c0: 0a3c 6720 6964 3d22 6564 6765 3936 2220 .<g id=\"edge96\" \n+000106d0: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n+000106e0: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+000106f0: 6772 6f6d 6163 735f 6d64 6c69 6226 2334 gromacs_mdlib\n+00010700: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00010710: 5f67 726f 6d61 6373 5f72 616e 646f 6d3c _gromacs_random<\n+00010720: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00010730: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00010740: 3d22 626c 6163 6b22 2073 7472 6f6b 652d =\"black\" stroke-\n+00010750: 6461 7368 6172 7261 793d 2235 2c32 2220 dasharray=\"5,2\" \n+00010760: 643d 224d 3132 3636 2e33 312c 2d37 3833 d=\"M1266.31,-783\n+00010770: 2e31 3843 3134 3533 2e36 392c 2d37 3834 .18C1453.69,-784\n+00010780: 2e38 3220 3235 3038 2c2d 3738 382e 3332 .82 2508,-788.32\n+00010790: 2032 3530 382c 2d36 3539 2e31 3420 3235 2508,-659.14 25\n+000107a0: 3038 2c2d 3635 392e 3134 2032 3530 382c 08,-659.14 2508,\n+000107b0: 2d36 3539 2e31 3420 3235 3038 2c2d 3334 -659.14 2508,-34\n+000107c0: 322e 3739 2032 3530 382c 2d32 3536 2e35 2.79 2508,-256.5\n+000107d0: 3720 3234 3733 2e37 312c 2d31 3538 2e31 7 2473.71,-158.1\n+000107e0: 3220 3234 3536 2e39 372c 2d31 3135 2e32 2 2456.97,-115.2\n+000107f0: 3122 2f3e 0a3c 706f 6c79 676f 6e20 6669 1\"/>.<polygon fi\n+00010800: 6c6c 3d22 626c 6163 6b22 2073 7472 6f6b ll=\"black\" strok\n+00010810: 653d 2262 6c61 636b 2220 706f 696e 7473 e=\"black\" points\n+00010820: 3d22 3234 3630 2e31 372c 2d31 3133 2e37 =\"2460.17,-113.7\n+00010830: 3720 3234 3533 2e32 322c 2d31 3035 2e37 7 2453.22,-105.7\n+00010840: 3720 3234 3533 2e36 362c 2d31 3136 2e33 7 2453.66,-116.3\n+00010850: 3620 3234 3630 2e31 372c 2d31 3133 2e37 6 2460.17,-113.7\n+00010860: 3722 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 7\"/>.</g>.<!-- m\n+00010870: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00010880: 735f 6d64 6c69 6226 2334 353b 2667 743b s_mdlib->\n+00010890: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000108a0: 6373 5f63 6f6d 7061 7420 2d2d 3e0a 3c67 cs_compat -->.<g\n+000108b0: 2069 643d 2265 6467 6539 3322 2063 6c61 id=\"edge93\" cla\n+000108c0: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.<titl\n+000108d0: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n+000108e0: 6d61 6373 5f6d 646c 6962 2623 3435 3b26 macs_mdlib-&\n+000108f0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00010900: 6f6d 6163 735f 636f 6d70 6174 3c2f 7469 omacs_compat</ti\n+00010910: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+00010920: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+00010930: 3238 3266 6363 2220 643d 224d 3132 3635 282fcc\" d=\"M1265\n+00010940: 2e38 382c 2d37 3831 2e33 4331 3333 352e .88,-781.3C1335.\n+00010950: 3938 2c2d 3737 372e 3032 2031 3532 352e 98,-777.02 1525.\n+00010960: 3033 2c2d 3736 332e 3439 2031 3638 302c 03,-763.49 1680,\n+00010970: 2d37 3334 2e34 3420 3137 3836 2e32 372c -734.44 1786.27,\n+00010980: 2d37 3134 2e35 3220 3138 3139 2e37 362c -714.52 1819.76,\n+00010990: 2d37 3232 2e37 3520 3139 3135 2c2d 3637 -722.75 1915,-67\n+000109a0: 312e 3537 2031 3935 322e 3133 2c2d 3635 1.57 1952.13,-65\n+000109b0: 312e 3632 2031 3936 382e 372c 2d36 3437 1.62 1968.7,-647\n+000109c0: 2e31 3320 3139 3836 2c2d 3630 382e 3720 .13 1986,-608.7 \n+000109d0: 3139 3930 2e39 2c2d 3539 372e 3831 2031 1990.9,-597.81 1\n+000109e0: 3939 322e 3934 2c2d 3539 312e 3535 2031 992.94,-591.55 1\n+000109f0: 3938 362c 2d35 3831 2e38 3320 3139 3537 986,-581.83 1957\n+00010a00: 2e33 332c 2d35 3431 2e36 3920 3139 3134 .33,-541.69 1914\n+00010a10: 2e31 372c 2d35 3832 2e33 3520 3138 3831 .17,-582.35 1881\n+00010a20: 2c2d 3534 352e 3833 2031 3833 382e 3534 ,-545.83 1838.54\n+00010a30: 2c2d 3439 392e 3120 3138 3438 2c2d 3437 ,-499.1 1848,-47\n+00010a40: 302e 3739 2031 3834 382c 2d34 3037 2e36 0.79 1848,-407.6\n+00010a50: 3620 3138 3438 2c2d 3430 372e 3636 2031 6 1848,-407.66 1\n+00010a60: 3834 382c 2d34 3037 2e36 3620 3138 3438 848,-407.66 1848\n+00010a70: 2c2d 3334 322e 3739 2031 3834 382c 2d32 ,-342.79 1848,-2\n+00010a80: 3535 2e35 3420 3138 3037 2e38 322c 2d31 55.54 1807.82,-1\n+00010a90: 3537 2e32 3920 3137 3838 2e33 342c 2d31 57.29 1788.34,-1\n+00010aa0: 3134 2e37 3922 2f3e 0a3c 706f 6c79 676f 14.79\"/>.<polygo\n+00010ab0: 6e20 6669 6c6c 3d22 2332 3832 6663 6322 n fill=\"#282fcc\"\n+00010ac0: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n+00010ad0: 2220 706f 696e 7473 3d22 3137 3931 2e34 \" points=\"1791.4\n+00010ae0: 392c 2d31 3133 2e32 3620 3137 3834 2e30 9,-113.26 1784.0\n+00010af0: 392c 2d31 3035 2e36 3820 3137 3835 2e31 9,-105.68 1785.1\n+00010b00: 352c 2d31 3136 2e32 3220 3137 3931 2e34 5,-116.22 1791.4\n+00010b10: 392c 2d31 3133 2e32 3622 2f3e 0a3c 2f67 9,-113.26\"/>.</g\n+00010b20: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+00010b30: 635f 6772 6f6d 6163 735f 6d64 6c69 6226 c_gromacs_mdlib&\n+00010b40: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00010b50: 7263 5f67 726f 6d61 6373 5f63 6f6d 6d61 rc_gromacs_comma\n+00010b60: 6e64 6c69 6e65 202d 2d3e 0a3c 6720 6964 ndline -->.<g id\n+00010b70: 3d22 6564 6765 3934 2220 636c 6173 733d =\"edge94\" class=\n+00010b80: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+00010b90: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00010ba0: 735f 6d64 6c69 6226 2334 353b 2667 743b s_mdlib->\n+00010bb0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00010bc0: 6373 5f63 6f6d 6d61 6e64 6c69 6e65 3c2f cs_commandline</\n+00010bd0: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+00010be0: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+00010bf0: 2262 6c61 636b 2220 7374 726f 6b65 2d64 \"black\" stroke-d\n+00010c00: 6173 6861 7272 6179 3d22 352c 3222 2064 asharray=\"5,2\" d\n+00010c10: 3d22 4d31 3235 352e 3537 2c2d 3737 332e =\"M1255.57,-773.\n+00010c20: 3131 4331 3236 392e 3434 2c2d 3736 342e 11C1269.44,-764.\n+00010c30: 3537 2031 3238 382e 3334 2c2d 3735 302e 57 1288.34,-750.\n+00010c40: 3936 2031 3330 302c 2d37 3334 2e34 3420 96 1300,-734.44 \n+00010c50: 3133 3235 2e33 332c 2d36 3938 2e35 3420 1325.33,-698.54 \n+00010c60: 3133 3337 2e34 372c 2d36 3437 2e37 2031 1337.47,-647.7 1\n+00010c70: 3334 322e 3635 2c2d 3631 382e 3735 222f 342.65,-618.75\"/\n+00010c80: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n+00010c90: 2262 6c61 636b 2220 7374 726f 6b65 3d22 \"black\" stroke=\"\n+00010ca0: 626c 6163 6b22 2070 6f69 6e74 733d 2231 black\" points=\"1\n+00010cb0: 3334 362e 3132 2c2d 3631 392e 3235 2031 346.12,-619.25 1\n+00010cc0: 3334 342e 3331 2c2d 3630 382e 3831 2031 344.31,-608.81 1\n+00010cd0: 3333 392e 3231 2c2d 3631 382e 3039 2031 339.21,-618.09 1\n+00010ce0: 3334 362e 3132 2c2d 3631 392e 3235 222f 346.12,-619.25\"/\n+00010cf0: 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f 6475 >.</g>.<!-- modu\n+00010d00: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+00010d10: 646c 6962 2623 3435 3b26 6774 3b6d 6f64 dlib->mod\n+00010d20: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00010d30: 6770 755f 7574 696c 7320 2d2d 3e0a 3c67 gpu_utils -->.<g\n+00010d40: 2069 643d 2265 6467 6538 3122 2063 6c61 id=\"edge81\" cla\n+00010d50: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.<titl\n+00010d60: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n+00010d70: 6d61 6373 5f6d 646c 6962 2623 3435 3b26 macs_mdlib-&\n+00010d80: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00010d90: 6f6d 6163 735f 6770 755f 7574 696c 733c omacs_gpu_utils<\n+00010da0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00010db0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00010dc0: 3d22 7265 6422 2064 3d22 4d31 3232 382e =\"red\" d=\"M1228.\n+00010dd0: 3836 2c2d 3739 362e 3738 4331 3231 362e 86,-796.78C1216.\n+00010de0: 3731 2c2d 3831 322e 3233 2031 3139 342e 71,-812.23 1194.\n+00010df0: 322c 2d38 3339 2e36 3320 3131 3732 2c2d 2,-839.63 1172,-\n+00010e00: 3836 302e 3138 2031 3133 372e 3738 2c2d 860.18 1137.78,-\n+00010e10: 3839 312e 3836 2031 3132 372e 3133 2c2d 891.86 1127.13,-\n+00010e20: 3839 372e 3639 2031 3038 382c 2d39 3233 897.69 1088,-923\n+00010e30: 2e30 3520 3130 3339 2e37 372c 2d39 3534 .05 1039.77,-954\n+00010e40: 2e33 3120 3130 3239 2e32 342c 2d39 3636 .31 1029.24,-966\n+00010e50: 2e39 3120 3937 352c 2d39 3835 2e39 3220 .91 975,-985.92 \n+00010e60: 3839 332e 3938 2c2d 3130 3134 2e33 3220 893.98,-1014.32 \n+00010e70: 3739 342e 3133 2c2d 3130 3236 2e33 3420 794.13,-1026.34 \n+00010e80: 3733 352e 3832 2c2d 3130 3331 2e32 3322 735.82,-1031.23\"\n+00010e90: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n+00010ea0: 3d22 7265 6422 2073 7472 6f6b 653d 2272 =\"red\" stroke=\"r\n+00010eb0: 6564 2220 706f 696e 7473 3d22 3733 352e ed\" points=\"735.\n+00010ec0: 3436 2c2d 3130 3237 2e37 3420 3732 352e 46,-1027.74 725.\n+00010ed0: 3737 2c2d 3130 3332 2e30 3320 3733 362e 77,-1032.03 736.\n+00010ee0: 3032 2c2d 3130 3334 2e37 3220 3733 352e 02,-1034.72 735.\n+00010ef0: 3436 2c2d 3130 3237 2e37 3422 2f3e 0a3c 46,-1027.74\"/>.<\n+00010f00: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.<!-- module_\n+00010f10: 7372 635f 6772 6f6d 6163 735f 6d64 6c69 src_gromacs_mdli\n+00010f20: 6226 2334 353b 2667 743b 6d6f 6475 6c65 b->module\n+00010f30: 5f73 7263 5f67 726f 6d61 6373 5f6d 6472 _src_gromacs_mdr\n+00010f40: 756e 7574 696c 6974 7920 2d2d 3e0a 3c67 unutility -->.<g\n+00010f50: 2069 643d 2265 6467 6539 3022 2063 6c61 id=\"edge90\" cla\n+00010f60: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.<titl\n+00010f70: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n+00010f80: 6d61 6373 5f6d 646c 6962 2623 3435 3b26 macs_mdlib-&\n+00010f90: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00010fa0: 6f6d 6163 735f 6d64 7275 6e75 7469 6c69 omacs_mdrunutili\n+00010fb0: 7479 3c2f 7469 746c 653e 0a3c 7061 7468 ty...\n+000110e0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ..\n+00011110: 3c67 2069 643d 226e 6f64 6534 3922 2063 .module_src_g\n+00011140: 726f 6d61 6373 5f61 7070 6c69 6564 5f66 romacs_applied_f\n+00011150: 6f72 6365 735f 6177 683c 2f74 6974 6c65 orces_awh...awh\n+00011270: 0a3c 2f61 3e0a 3c2f 673e 0a3c 2f67 3e0a ....\n+00011280: 3c21 2d2d 206d 6f64 756c 655f 7372 635f .\n+000112d0: 3c67 2069 643d 2265 6467 6538 3422 2063 .module_src_g\n+00011300: 726f 6d61 6373 5f6d 646c 6962 2623 3435 romacs_mdlib-\n+00011310: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00011320: 6772 6f6d 6163 735f 6170 706c 6965 645f gromacs_applied_\n+00011330: 666f 7263 6573 5f61 7768 3c2f 7469 746c forces_awh...\n+00011490: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ..\n+000114f0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n+00011500: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+00011510: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+00011520: 7372 635f 7465 7374 7574 696c 733c 2f74 src_testutils</t\n+00011530: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+00011540: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n+00011550: 7265 6422 2064 3d22 4d31 3236 362e 3139 red\" d=\"M1266.19\n+00011560: 2c2d 3738 352e 3633 4331 3437 342e 362c ,-785.63C1474.6,\n+00011570: 2d37 3931 2e33 3820 3237 3638 2c2d 3833 -791.38 2768,-83\n+00011580: 302e 3231 2032 3736 382c 2d39 3038 2e36 0.21 2768,-908.6\n+00011590: 3220 3237 3638 2c2d 3937 332e 3439 2032 2 2768,-973.49 2\n+000115a0: 3736 382c 2d39 3733 2e34 3920 3237 3638 768,-973.49 2768\n+000115b0: 2c2d 3937 332e 3439 2032 3736 382c 2d31 ,-973.49 2768,-1\n+000115c0: 3031 302e 3635 2032 3735 322e 3134 2c2d 010.65 2752.14,-\n+000115d0: 3130 3531 2e34 3420 3237 3430 2e39 312c 1051.44 2740.91,\n+000115e0: 2d31 3037 352e 3636 222f 3e0a 3c70 6f6c -1075.66\"/>.<pol\n+000115f0: 7967 6f6e 2066 696c 6c3d 2272 6564 2220 ygon fill=\"red\" \n+00011600: 7374 726f 6b65 3d22 7265 6422 2070 6f69 stroke=\"red\" poi\n+00011610: 6e74 733d 2232 3733 372e 3632 2c2d 3130 nts=\"2737.62,-10\n+00011620: 3734 2e34 3320 3237 3336 2e34 352c 2d31 74.43 2736.45,-1\n+00011630: 3038 342e 3936 2032 3734 332e 3933 2c2d 084.96 2743.93,-\n+00011640: 3130 3737 2e34 3620 3237 3337 2e36 322c 1077.46 2737.62,\n+00011650: 2d31 3037 342e 3433 222f 3e0a 3c2f 673e -1074.43\"/>.</g>\n+00011660: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 .<!-- module_src\n+00011670: 5f67 726f 6d61 6373 5f66 696c 6569 6f26 _gromacs_fileio&\n+00011680: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00011690: 7263 5f67 726f 6d61 6373 5f67 6d78 6c69 rc_gromacs_gmxli\n+000116a0: 6220 2d2d 3e0a 3c67 2069 643d 2265 6467 b -->.<g id=\"edg\n+000116b0: 6531 3034 2220 636c 6173 733d 2265 6467 e104\" class=\"edg\n+000116c0: 6522 3e0a 3c74 6974 6c65 3e6d 6f64 756c e\">.<title>modul\n+000116d0: 655f 7372 635f 6772 6f6d 6163 735f 6669 e_src_gromacs_fi\n+000116e0: 6c65 696f 2623 3435 3b26 6774 3b6d 6f64 leio->mod\n+000116f0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00011700: 676d 786c 6962 3c2f 7469 746c 653e 0a3c gmxlib.<\n+00011710: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+00011720: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+00011730: 2220 643d 224d 3134 3634 2e39 372c 2d35 \" d=\"M1464.97,-5\n+00011740: 3436 2e31 3243 3134 3633 2e34 362c 2d35 46.12C1463.46,-5\n+00011750: 3535 2e38 3720 3134 3631 2e34 322c 2d35 55.87 1461.42,-5\n+00011760: 3639 2e36 3820 3134 3630 2c2d 3538 312e 69.68 1460,-581.\n+00011770: 3833 2031 3435 352e 3336 2c2d 3632 312e 83 1455.36,-621.\n+00011780: 3620 3134 3731 2e39 332c 2d36 3336 2e38 6 1471.93,-636.8\n+00011790: 3420 3134 3532 2c2d 3637 312e 3537 2031 4 1452,-671.57 1\n+000117a0: 3430 332e 3937 2c2d 3735 352e 3236 2031 403.97,-755.26 1\n+000117b0: 3336 302e 3135 2c2d 3735 312e 3931 2031 360.15,-751.91 1\n+000117c0: 3237 352c 2d37 3937 2e33 3120 3131 3236 275,-797.31 1126\n+000117d0: 2e39 332c 2d38 3736 2e32 3620 3932 332e .93,-876.26 923.\n+000117e0: 3836 2c2d 3839 392e 3539 2038 3337 2e35 86,-899.59 837.5\n+000117f0: 342c 2d39 3036 2e31 3722 2f3e 0a3c 706f 4,-906.17\"/>.....\n+000118e0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000118f0: 6373 5f66 696c 6569 6f26 2334 353b 2667 cs_fileio-&g\n+00011900: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00011910: 6d61 6373 5f74 7261 6a65 6374 6f72 793c macs_trajectory<\n+00011920: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00011930: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00011940: 3d22 2362 6662 6662 6622 2064 3d22 4d31 =\"#bfbfbf\" d=\"M1\n+00011950: 3439 342e 3038 2c2d 3533 312e 3131 4331 494.08,-531.11C1\n+00011960: 3630 382e 3039 2c2d 3532 392e 3635 2032 608.09,-529.65 2\n+00011970: 3034 392e 3234 2c2d 3532 312e 3538 2032 049.24,-521.58 2\n+00011980: 3138 322c 2d34 3832 2e39 3620 3232 3934 182,-482.96 2294\n+00011990: 2e32 342c 2d34 3530 2e33 3120 3233 3236 .24,-450.31 2326\n+000119a0: 2e38 332c 2d34 3336 2e32 2032 3431 332c .83,-436.2 2413,\n+000119b0: 2d33 3537 2e32 3220 3234 3933 2e39 372c -357.22 2493.97,\n+000119c0: 2d32 3833 2e30 3120 3235 3535 2e31 352c -283.01 2555.15,\n+000119d0: 2d31 3633 2e38 3920 3235 3738 2e31 312c -163.89 2578.11,\n+000119e0: 2d31 3135 2e31 3622 2f3e 0a3c 706f 6c79 -115.16\"/>.<poly\n+000119f0: 676f 6e20 6669 6c6c 3d22 2362 6662 6662 gon fill=\"#bfbfb\n+00011a00: 6622 2073 7472 6f6b 653d 2223 6266 6266 f\" stroke=\"#bfbf\n+00011a10: 6266 2220 706f 696e 7473 3d22 3235 3831 bf\" points=\"2581\n+00011a20: 2e33 382c 2d31 3136 2e34 3120 3235 3832 .38,-116.41 2582\n+00011a30: 2e34 322c 2d31 3035 2e38 3720 3235 3735 .42,-105.87 2575\n+00011a40: 2e30 332c 2d31 3133 2e34 3620 3235 3831 .03,-113.46 2581\n+00011a50: 2e33 382c 2d31 3136 2e34 3122 2f3e 0a3c .38,-116.41\"/>.<\n+00011a60: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.<!-- module_\n+00011a70: 7372 635f 6772 6f6d 6163 735f 6669 6c65 src_gromacs_file\n+00011a80: 696f 2623 3435 3b26 6774 3b6d 6f64 756c io->modul\n+00011a90: 655f 7372 635f 6772 6f6d 6163 735f 6d6f e_src_gromacs_mo\n+00011aa0: 6475 6c61 7273 696d 756c 6174 6f72 202d dularsimulator -\n+00011ab0: 2d3e 0a3c 6720 6964 3d22 6564 6765 3130 ->.<g id=\"edge10\n+00011ac0: 3622 2063 6c61 7373 3d22 6564 6765 223e 6\" class=\"edge\">\n+00011ad0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+00011ae0: 7263 5f67 726f 6d61 6373 5f66 696c 6569 rc_gromacs_filei\n+00011af0: 6f26 2334 353b 2667 743b 6d6f 6475 6c65 o->module\n+00011b00: 5f73 7263 5f67 726f 6d61 6373 5f6d 6f64 _src_gromacs_mod\n+00011b10: 756c 6172 7369 6d75 6c61 746f 723c 2f74 ularsimulator</t\n+00011b20: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+00011b30: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n+00011b40: 7265 6422 2064 3d22 4d31 3434 312e 3038 red\" d=\"M1441.08\n+00011b50: 2c2d 3532 382e 3432 4331 3336 392e 3033 ,-528.42C1369.03\n+00011b60: 2c2d 3531 392e 3535 2031 3136 352e 3632 ,-519.55 1165.62\n+00011b70: 2c2d 3439 332e 3035 2031 3036 322e 3438 ,-493.05 1062.48\n+00011b80: 2c2d 3437 392e 3139 222f 3e0a 3c70 6f6c ,-479.19\"/>.<pol\n+00011b90: 7967 6f6e 2066 696c 6c3d 2272 6564 2220 ygon fill=\"red\" \n+00011ba0: 7374 726f 6b65 3d22 7265 6422 2070 6f69 stroke=\"red\" poi\n+00011bb0: 6e74 733d 2231 3036 322e 3839 2c2d 3437 nts=\"1062.89,-47\n+00011bc0: 352e 3732 2031 3035 322e 3531 2c2d 3437 5.72 1052.51,-47\n+00011bd0: 372e 3835 2031 3036 312e 3936 2c2d 3438 7.85 1061.96,-48\n+00011be0: 322e 3636 2031 3036 322e 3839 2c2d 3437 2.66 1062.89,-47\n+00011bf0: 352e 3732 222f 3e0a 3c2f 673e 0a3c 212d 5.72\"/>.</g>.<!-\n+00011c00: 2d20 6d6f 6475 6c65 5f73 7263 5f67 726f - module_src_gro\n+00011c10: 6d61 6373 5f66 696c 6569 6f26 2334 353b macs_fileio-\n+00011c20: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00011c30: 726f 6d61 6373 5f6d 6474 7970 6573 202d romacs_mdtypes -\n+00011c40: 2d3e 0a3c 6720 6964 3d22 6564 6765 3130 ->.<g id=\"edge10\n+00011c50: 3122 2063 6c61 7373 3d22 6564 6765 223e 1\" class=\"edge\">\n+00011c60: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+00011c70: 7263 5f67 726f 6d61 6373 5f66 696c 6569 rc_gromacs_filei\n+00011c80: 6f26 2334 353b 2667 743b 6d6f 6475 6c65 o->module\n+00011c90: 5f73 7263 5f67 726f 6d61 6373 5f6d 6474 _src_gromacs_mdt\n+00011ca0: 7970 6573 3c2f 7469 746c 653e 0a3c 7061 ypes......module_src_grom\n+00011e80: 6163 735f 6669 6c65 696f 2623 3435 3b26 acs_fileio-&\n+00011e90: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00011ea0: 6f6d 6163 735f 6d64 7370 616e 3c2f 7469 omacs_mdspan.....\n+00012010: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .module_s\n+00012020: 7263 5f67 726f 6d61 6373 5f66 696c 6569 rc_gromacs_filei\n+00012030: 6f26 2334 353b 2667 743b 6d6f 6475 6c65 o->module\n+00012040: 5f73 7263 5f67 726f 6d61 6373 5f63 6f6d _src_gromacs_com\n+00012050: 7061 743c 2f74 6974 6c65 3e0a 3c70 6174 pat......module_src_gro\n+00012220: 6d61 6373 5f66 696c 6569 6f26 2334 353b macs_fileio-\n+00012230: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00012240: 726f 6d61 6373 5f6d 6472 756e 7574 696c romacs_mdrunutil\n+00012250: 6974 793c 2f74 6974 6c65 3e0a 3c70 6174 ity......module\n+00012630: 5f73 7263 5f67 726f 6d61 6373 5f66 696c _src_gromacs_fil\n+00012640: 6569 6f26 2334 353b 2667 743b 6d6f 6475 eio->modu\n+00012650: 6c65 5f73 7263 5f74 6573 7475 7469 6c73 le_src_testutils\n+00012660: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......module_src_grom\n+00012830: 6163 735f 7062 6375 7469 6c3c 2f74 6974 acs_pbcutil..pbcutil...\n+00012950: 3c67 2069 643d 2265 6467 6531 3039 2220 .module_src_\n+00012980: 6772 6f6d 6163 735f 7062 6375 7469 6c26 gromacs_pbcutil&\n+00012990: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+000129a0: 7263 5f67 726f 6d61 6373 5f67 7075 5f75 rc_gromacs_gpu_u\n+000129b0: 7469 6c73 3c2f 7469 746c 653e 0a3c 7061 tils....\n+00012aa0: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..module\n+00012b10: 5f73 7263 5f67 726f 6d61 6373 5f6d 6474 _src_gromacs_mdt\n+00012b20: 7970 6573 2623 3435 3b26 6774 3b6d 6f64 ypes->mod\n+00012b30: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00012b40: 6d64 6c69 623c 2f74 6974 6c65 3e0a 3c70 mdlib......module_\n+00012ca0: 7372 635f 6772 6f6d 6163 735f 6d64 7479 src_gromacs_mdty\n+00012cb0: 7065 7326 2334 353b 2667 743b 6d6f 6475 pes->modu\n+00012cc0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f66 le_src_gromacs_f\n+00012cd0: 696c 6569 6f3c 2f74 6974 6c65 3e0a 3c70 ileio.....<\n+00012ea0: 6720 6964 3d22 6564 6765 3131 3422 2063 g id=\"edge114\" c\n+00012eb0: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n+00012ed0: 726f 6d61 6373 5f6d 6474 7970 6573 2623 romacs_mdtypes&#\n+00012ee0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00012ef0: 635f 6772 6f6d 6163 735f 646f 6d64 6563 c_gromacs_domdec\n+00012f00: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......\n+00013060: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+00013070: 635f 6772 6f6d 6163 735f 6d64 7479 7065 c_gromacs_mdtype\n+00013080: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+00013090: 5f73 7263 5f67 726f 6d61 6373 5f65 7761 _src_gromacs_ewa\n+000130a0: 6c64 3c2f 7469 746c 653e 0a3c 7061 7468 ld.\n+00013150: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ..\n+000131c0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...module_src_gr\n+00013240: 6f6d 6163 735f 6d64 7479 7065 7326 2334 omacs_mdtypes\n+00013250: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00013260: 5f67 726f 6d61 6373 5f67 7075 5f75 7469 _gromacs_gpu_uti\n+00013270: 6c73 3c2f 7469 746c 653e 0a3c 7061 7468 ls..<\n+00013310: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n+00013320: 3832 6663 6322 2073 7472 6f6b 653d 2223 82fcc\" stroke=\"#\n+00013330: 3238 3266 6363 2220 706f 696e 7473 3d22 282fcc\" points=\"\n+00013340: 3733 322e 3531 2c2d 3130 3234 2e38 3520 732.51,-1024.85 \n+00013350: 3732 332e 3133 2c2d 3130 3239 2e37 3720 723.13,-1029.77 \n+00013360: 3733 332e 3533 2c2d 3130 3331 2e37 3820 733.53,-1031.78 \n+00013370: 3733 322e 3531 2c2d 3130 3234 2e38 3522 732.51,-1024.85\"\n+00013380: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />....m\n+00013400: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00013410: 735f 6d64 7479 7065 7326 2334 353b 2667 s_mdtypes-&g\n+00013420: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00013430: 6d61 6373 5f61 7070 6c69 6564 5f66 6f72 macs_applied_for\n+00013440: 6365 735f 6177 683c 2f74 6974 6c65 3e0a ces_awh.\n+00013450: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ...<\n+000135f0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00013600: 726f 6d61 6373 5f64 6f6d 6465 6326 2334 romacs_domdec\n+00013610: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00013620: 5f67 726f 6d61 6373 5f69 6d64 202d 2d3e _gromacs_imd -->\n+00013630: 0a3c 6720 6964 3d22 6564 6765 3132 3622 ..<\n+00013650: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+00013660: 5f67 726f 6d61 6373 5f64 6f6d 6465 6326 _gromacs_domdec&\n+00013670: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00013680: 7263 5f67 726f 6d61 6373 5f69 6d64 3c2f rc_gromacs_imd....\n+00013850: 0a3c 6720 6964 3d22 6564 6765 3131 3622 ..<\n+00013870: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+00013880: 5f67 726f 6d61 6373 5f64 6f6d 6465 6326 _gromacs_domdec&\n+00013890: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+000138a0: 7263 5f67 726f 6d61 6373 5f67 6d78 6c69 rc_gromacs_gmxli\n+000138b0: 623c 2f74 6974 6c65 3e0a 3c70 6174 6820 b..\n+00013990: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....m\n+00013a70: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00013a80: 735f 646f 6d64 6563 2623 3435 3b26 6774 s_domdec->\n+00013a90: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00013aa0: 6163 735f 6861 7264 7761 7265 3c2f 7469 acs_hardware</ti\n+00013ab0: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+00013ac0: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+00013ad0: 6266 6266 6266 2220 643d 224d 3533 352e bfbfbf\" d=\"M535.\n+00013ae0: 3739 2c2d 3239 302e 3334 4335 3136 2e36 79,-290.34C516.6\n+00013af0: 342c 2d32 3937 2e38 3420 3439 312e 3537 4,-297.84 491.57\n+00013b00: 2c2d 3331 302e 3731 2034 3737 2c2d 3333 ,-310.71 477,-33\n+00013b10: 302e 3335 2034 3035 2e33 342c 2d34 3236 0.35 405.34,-426\n+00013b20: 2e39 3620 3431 372c 2d34 3733 2e39 3820 .96 417,-473.98 \n+00013b30: 3431 372c 2d35 3934 2e32 3720 3431 372c 417,-594.27 417,\n+00013b40: 2d37 3232 2e30 3120 3431 372c 2d37 3232 -722.01 417,-722\n+00013b50: 2e30 3120 3431 372c 2d37 3232 2e30 3120 .01 417,-722.01 \n+00013b60: 3431 372c 2d38 3038 2e32 3220 3336 342c 417,-808.22 364,\n+00013b70: 2d38 3232 2e34 2033 3634 2c2d 3930 382e -822.4 364,-908.\n+00013b80: 3632 2033 3634 2c2d 3937 332e 3439 2033 62 364,-973.49 3\n+00013b90: 3634 2c2d 3937 332e 3439 2033 3634 2c2d 64,-973.49 364,-\n+00013ba0: 3937 332e 3439 2033 3634 2c2d 3130 3633 973.49 364,-1063\n+00013bb0: 2e30 3820 3436 362e 3539 2c2d 3130 3138 .08 466.59,-1018\n+00013bc0: 2e37 3520 3535 312c 2d31 3034 382e 3739 .75 551,-1048.79\n+00013bd0: 2035 3930 2e35 342c 2d31 3036 322e 3836 590.54,-1062.86\n+00013be0: 2036 3336 2e34 392c 2d31 3037 362e 3835 636.49,-1076.85\n+00013bf0: 2036 3638 2e32 332c 2d31 3038 362e 3135 668.23,-1086.15\n+00013c00: 222f 3e0a 3c70 6f6c 7967 6f6e 2066 696c \"/>.<polygon fil\n+00013c10: 6c3d 2223 6266 6266 6266 2220 7374 726f l=\"#bfbfbf\" stro\n+00013c20: 6b65 3d22 2362 6662 6662 6622 2070 6f69 ke=\"#bfbfbf\" poi\n+00013c30: 6e74 733d 2236 3637 2e34 342c 2d31 3038 nts=\"667.44,-108\n+00013c40: 392e 3536 2036 3738 2e30 322c 2d31 3038 9.56 678.02,-108\n+00013c50: 3920 3636 392e 3339 2c2d 3130 3832 2e38 9 669.39,-1082.8\n+00013c60: 3420 3636 372e 3434 2c2d 3130 3839 2e35 4 667.44,-1089.5\n+00013c70: 3622 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6\"/>.</g>.<!-- m\n+00013c80: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00013c90: 735f 646f 6d64 6563 2623 3435 3b26 6774 s_domdec->\n+00013ca0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00013cb0: 6163 735f 6d64 6c69 6220 2d2d 3e0a 3c67 acs_mdlib -->.<g\n+00013cc0: 2069 643d 2265 6467 6531 3230 2220 636c id=\"edge120\" cl\n+00013cd0: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.<tit\n+00013ce0: 6c65 3e6d 6f64 756c 655f 7372 635f 6772 le>module_src_gr\n+00013cf0: 6f6d 6163 735f 646f 6d64 6563 2623 3435 omacs_domdec-\n+00013d00: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00013d10: 6772 6f6d 6163 735f 6d64 6c69 623c 2f74 gromacs_mdlib</t\n+00013d20: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+00013d30: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n+00013d40: 2362 6662 6662 6622 2064 3d22 4d35 3637 #bfbfbf\" d=\"M567\n+00013d50: 2e30 312c 2d32 3934 2e32 3443 3537 302e .01,-294.24C570.\n+00013d60: 3939 2c2d 3331 382e 3535 2035 3732 2e31 99,-318.55 572.1\n+00013d70: 382c 2d33 3734 2e32 3720 3538 312c 2d34 8,-374.27 581,-4\n+00013d80: 3230 2e30 3920 3631 312e 3236 2c2d 3537 20.09 611.26,-57\n+00013d90: 372e 3332 2036 3137 2e31 352c 2d36 3536 7.32 617.15,-656\n+00013da0: 2e34 3720 3735 372c 2d37 3334 2e34 3420 .47 757,-734.44 \n+00013db0: 3833 332e 3137 2c2d 3737 362e 3931 2031 833.17,-776.91 1\n+00013dc0: 3039 392e 3137 2c2d 3738 322e 3435 2031 099.17,-782.45 1\n+00013dd0: 3139 392e 3438 2c2d 3738 322e 3935 222f 199.48,-782.95\"/\n+00013de0: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n+00013df0: 2223 6266 6266 6266 2220 7374 726f 6b65 \"#bfbfbf\" stroke\n+00013e00: 3d22 2362 6662 6662 6622 2070 6f69 6e74 =\"#bfbfbf\" point\n+00013e10: 733d 2231 3139 392e 3438 2c2d 3738 362e s=\"1199.48,-786.\n+00013e20: 3435 2031 3230 392e 3439 2c2d 3738 322e 45 1209.49,-782.\n+00013e30: 3938 2031 3139 392e 352c 2d37 3739 2e34 98 1199.5,-779.4\n+00013e40: 3520 3131 3939 2e34 382c 2d37 3836 2e34 5 1199.48,-786.4\n+00013e50: 3522 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 5\"/>.</g>.<!-- m\n+00013e60: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00013e70: 735f 646f 6d64 6563 2623 3435 3b26 6774 s_domdec->\n+00013e80: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00013e90: 6163 735f 6669 6c65 696f 202d 2d3e 0a3c acs_fileio -->.<\n+00013ea0: 6720 6964 3d22 6564 6765 3132 3722 2063 g id=\"edge127\" c\n+00013eb0: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.<ti\n+00013ec0: 746c 653e 6d6f 6475 6c65 5f73 7263 5f67 tle>module_src_g\n+00013ed0: 726f 6d61 6373 5f64 6f6d 6465 6326 2334 romacs_domdec\n+00013ee0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00013ef0: 5f67 726f 6d61 6373 5f66 696c 6569 6f3c _gromacs_fileio<\n+00013f00: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00013f10: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00013f20: 3d22 2362 6662 6662 6622 2064 3d22 4d35 =\"#bfbfbf\" d=\"M5\n+00013f30: 3936 2e39 332c 2d32 3834 2e36 3243 3635 96.93,-284.62C65\n+00013f40: 362e 3733 2c2d 3238 392e 3831 2037 3832 6.73,-289.81 782\n+00013f50: 2e32 322c 2d33 3033 2e31 3420 3838 352c .22,-303.14 885,\n+00013f60: 2d33 3330 2e33 3520 3130 3636 2e39 342c -330.35 1066.94,\n+00013f70: 2d33 3738 2e35 3120 3131 3030 2e38 332c -378.51 1100.83,\n+00013f80: 2d34 3235 2e33 3620 3132 3830 2c2d 3438 -425.36 1280,-48\n+00013f90: 322e 3936 2031 3333 322e 3638 2c2d 3439 2.96 1332.68,-49\n+00013fa0: 392e 3920 3133 3935 2e31 332c 2d35 3135 9.9 1395.13,-515\n+00013fb0: 2e31 3220 3134 3332 2e38 372c 2d35 3233 .12 1432.87,-523\n+00013fc0: 2e38 222f 3e0a 3c70 6f6c 7967 6f6e 2066 .8\"/>.<polygon f\n+00013fd0: 696c 6c3d 2223 6266 6266 6266 2220 7374 ill=\"#bfbfbf\" st\n+00013fe0: 726f 6b65 3d22 2362 6662 6662 6622 2070 roke=\"#bfbfbf\" p\n+00013ff0: 6f69 6e74 733d 2231 3433 322e 3331 2c2d oints=\"1432.31,-\n+00014000: 3532 372e 3237 2031 3434 322e 3834 2c2d 527.27 1442.84,-\n+00014010: 3532 362e 3038 2031 3433 332e 3836 2c2d 526.08 1433.86,-\n+00014020: 3532 302e 3434 2031 3433 322e 3331 2c2d 520.44 1432.31,-\n+00014030: 3532 372e 3237 222f 3e0a 3c2f 673e 0a3c 527.27\"/>.</g>.<\n+00014040: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00014050: 726f 6d61 6373 5f64 6f6d 6465 6326 2334 romacs_domdec\n+00014060: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00014070: 5f67 726f 6d61 6373 5f6d 6474 7970 6573 _gromacs_mdtypes\n+00014080: 202d 2d3e 0a3c 6720 6964 3d22 6564 6765 -->.<g id=\"edge\n+00014090: 3131 3722 2063 6c61 7373 3d22 6564 6765 117\" class=\"edge\n+000140a0: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n+000140b0: 5f73 7263 5f67 726f 6d61 6373 5f64 6f6d _src_gromacs_dom\n+000140c0: 6465 6326 2334 353b 2667 743b 6d6f 6475 dec->modu\n+000140d0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+000140e0: 6474 7970 6573 3c2f 7469 746c 653e 0a3c dtypes.<\n+000140f0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+00014100: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+00014110: 2220 643d 224d 3536 312e 3432 2c2d 3239 \" d=\"M561.42,-29\n+00014120: 342e 3634 4335 3532 2e31 352c 2d33 3534 4.64C552.15,-354\n+00014130: 2e32 2034 3936 2e31 382c 2d36 3037 2e37 .2 496.18,-607.7\n+00014140: 3620 3632 312c 2d37 3334 2e34 3420 3637 6 621,-734.44 67\n+00014150: 332e 3237 2c2d 3738 372e 3439 2038 3934 3.27,-787.49 894\n+00014160: 2e31 322c 2d38 3234 2e37 2039 3839 2e37 .12,-824.7 989.7\n+00014170: 332c 2d38 3339 2e31 3222 2f3e 0a3c 706f 3,-839.12\"/>...\n+000141f0: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..module_\n+00014260: 7372 635f 6772 6f6d 6163 735f 646f 6d64 src_gromacs_domd\n+00014270: 6563 2623 3435 3b26 6774 3b6d 6f64 756c ec->modul\n+00014280: 655f 7372 635f 6772 6f6d 6163 735f 6e62 e_src_gromacs_nb\n+00014290: 6e78 6d3c 2f74 6974 6c65 3e0a 3c70 6174 nxm..<\n+00014370: 706f 6c79 676f 6e20 6669 6c6c 3d22 7265 polygon fill=\"re\n+00014380: 6422 2073 7472 6f6b 653d 2272 6564 2220 d\" stroke=\"red\" \n+00014390: 706f 696e 7473 3d22 3639 332e 3333 2c2d points=\"693.33,-\n+000143a0: 3935 352e 3235 2037 3033 2e30 312c 2d39 955.25 703.01,-9\n+000143b0: 3539 2e35 3720 3639 382e 3133 2c2d 3935 59.57 698.13,-95\n+000143c0: 302e 3136 2036 3933 2e33 332c 2d39 3535 0.16 693.33,-955\n+000143d0: 2e32 3522 2f3e 0a3c 2f67 3e0a 3c21 2d2d .25\"/>...\n+00014420: 3c67 2069 643d 2265 6467 6531 3138 2220 .module_src_\n+00014450: 6772 6f6d 6163 735f 646f 6d64 6563 2623 gromacs_domdec&#\n+00014460: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00014470: 635f 6772 6f6d 6163 735f 6577 616c 643c c_gromacs_ewald<\n+00014480: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.\n+00014510: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....m\n+000145f0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00014600: 735f 646f 6d64 6563 2623 3435 3b26 6774 s_domdec->\n+00014610: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00014620: 6163 735f 6c69 7374 6564 5f66 6f72 6365 acs_listed_force\n+00014630: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s......\n+00014790: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+000147a0: 635f 6772 6f6d 6163 735f 646f 6d64 6563 c_gromacs_domdec\n+000147b0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+000147c0: 7372 635f 6772 6f6d 6163 735f 6d64 7275 src_gromacs_mdru\n+000147d0: 6e3c 2f74 6974 6c65 3e0a 3c70 6174 6820 n......mod\n+00014b40: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00014b50: 646f 6d64 6563 2623 3435 3b26 6774 3b6d domdec->m\n+00014b60: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00014b70: 735f 6d64 7275 6e75 7469 6c69 7479 3c2f s_mdrunutility</\n+00014b80: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+00014b90: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+00014ba0: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n+00014bb0: 2d64 6173 6861 7272 6179 3d22 352c 3222 -dasharray=\"5,2\"\n+00014bc0: 2064 3d22 4d35 3937 2e30 372c 2d32 3834 d=\"M597.07,-284\n+00014bd0: 2e35 4336 3539 2e36 382c 2d32 3839 2e37 .5C659.68,-289.7\n+00014be0: 3420 3738 372e 3336 2c2d 3330 332e 3437 4 787.36,-303.47\n+00014bf0: 2038 3232 2c2d 3333 302e 3335 2038 3531 822,-330.35 851\n+00014c00: 2e31 362c 2d33 3532 2e39 3820 3835 372c .16,-352.98 857,\n+00014c10: 2d33 3638 2e37 3520 3835 372c 2d34 3035 -368.75 857,-405\n+00014c20: 2e36 3620 3835 372c 2d34 3730 2e35 3320 .66 857,-470.53 \n+00014c30: 3835 372c 2d34 3730 2e35 3320 3835 372c 857,-470.53 857,\n+00014c40: 2d34 3730 2e35 3320 3835 372c 2d35 3531 -470.53 857,-551\n+00014c50: 2e31 3820 3934 342e 3634 2c2d 3631 332e .18 944.64,-613.\n+00014c60: 3135 2039 3932 2e35 362c 2d36 3431 222f 15 992.56,-641\"/\n+00014c70: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n+00014c80: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n+00014c90: 3d22 2332 3832 6663 6322 2070 6f69 6e74 =\"#282fcc\" point\n+00014ca0: 733d 2239 3930 2e38 372c 2d36 3434 2e30 s=\"990.87,-644.0\n+00014cb0: 3720 3130 3031 2e33 2c2d 3634 352e 3936 7 1001.3,-645.96\n+00014cc0: 2039 3934 2e33 332c 2d36 3337 2e39 3820 994.33,-637.98 \n+00014cd0: 3939 302e 3837 2c2d 3634 342e 3037 222f 990.87,-644.07\"/\n+00014ce0: 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f 6475 >.</g>.<!-- modu\n+00014cf0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n+00014d00: 6d78 616e 6126 2334 353b 2667 743b 6d6f mxana->mo\n+00014d10: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00014d20: 5f63 6f72 7265 6c61 7469 6f6e 6675 6e63 _correlationfunc\n+00014d30: 7469 6f6e 7320 2d2d 3e0a 3c67 2069 643d tions -->.<g id=\n+00014d40: 2265 6467 6531 3335 2220 636c 6173 733d \"edge135\" class=\n+00014d50: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+00014d60: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00014d70: 735f 676d 7861 6e61 2623 3435 3b26 6774 s_gmxana->\n+00014d80: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00014d90: 6163 735f 636f 7272 656c 6174 696f 6e66 acs_correlationf\n+00014da0: 756e 6374 696f 6e73 3c2f 7469 746c 653e unctions\n+00014db0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......module_\n+00014f20: 7372 635f 6772 6f6d 6163 735f 676d 7861 src_gromacs_gmxa\n+00014f30: 6e61 2623 3435 3b26 6774 3b6d 6f64 756c na->modul\n+00014f40: 655f 7372 635f 6772 6f6d 6163 735f 6666 e_src_gromacs_ff\n+00014f50: 743c 2f74 6974 6c65 3e0a 3c70 6174 6820 t.....\n+000150c0: 3c67 2069 643d 2265 6467 6531 3430 2220 .module_src_\n+000150f0: 6772 6f6d 6163 735f 676d 7861 6e61 2623 gromacs_gmxana&#\n+00015100: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00015110: 635f 6772 6f6d 6163 735f 676d 786c 6962 c_gromacs_gmxlib\n+00015120: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ..<\n+000151e0: 706f 6c79 676f 6e20 6669 6c6c 3d22 2362 polygon fill=\"#b\n+000151f0: 6662 6662 6622 2073 7472 6f6b 653d 2223 fbfbf\" stroke=\"#\n+00015200: 6266 6266 6266 2220 706f 696e 7473 3d22 bfbfbf\" points=\"\n+00015210: 3830 372e 3838 2c2d 3933 312e 3135 2038 807.88,-931.15 8\n+00015220: 3031 2e30 392c 2d39 3233 2e30 3220 3830 01.09,-923.02 80\n+00015230: 312e 3333 2c2d 3933 332e 3631 2038 3037 1.33,-933.61 807\n+00015240: 2e38 382c 2d39 3331 2e31 3522 2f3e 0a3c .88,-931.15\"/>.<\n+00015250: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_gro\n+000152d0: 6d61 6373 5f67 6d78 616e 6126 2334 353b macs_gmxana-\n+000152e0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+000152f0: 726f 6d61 6373 5f74 7261 6a65 6374 6f72 romacs_trajector\n+00015300: 793c 2f74 6974 6c65 3e0a 3c70 6174 6820 y...<\n+00015530: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...mod\n+000155a0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+000155b0: 676d 7861 6e61 2623 3435 3b26 6774 3b6d gmxana->m\n+000155c0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+000155d0: 735f 6d64 6c69 623c 2f74 6974 6c65 3e0a s_mdlib.\n+000155e0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ...\n+00015770: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..module\n+000157e0: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+000157f0: 616e 6126 2334 353b 2667 743b 6d6f 6475 ana->modu\n+00015800: 6c65 5f73 7263 5f67 726f 6d61 6373 5f66 le_src_gromacs_f\n+00015810: 696c 6569 6f3c 2f74 6974 6c65 3e0a 3c70 ileio...\n+000159a0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...\n+00015a10: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00015a20: 6373 5f67 6d78 616e 6126 2334 353b 2667 cs_gmxana-&g\n+00015a30: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00015a40: 6d61 6373 5f6d 6474 7970 6573 3c2f 7469 macs_mdtypes</ti\n+00015a50: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+00015a60: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+00015a70: 6266 6266 6266 2220 643d 224d 3136 3939 bfbfbf\" d=\"M1699\n+00015a80: 2e32 2c2d 3132 3836 2e34 3843 3136 3431 .2,-1286.48C1641\n+00015a90: 2e33 322c 2d31 3238 362e 3133 2031 3532 .32,-1286.13 152\n+00015aa0: 342e 3932 2c2d 3132 3739 2e36 3620 3134 4.92,-1279.66 14\n+00015ab0: 3338 2c2d 3132 3337 2e34 2031 3235 322e 38,-1237.4 1252.\n+00015ac0: 3332 2c2d 3131 3437 2e31 3420 3132 3337 32,-1147.14 1237\n+00015ad0: 2e39 352c 2d31 3037 322e 3936 2031 3039 .95,-1072.96 109\n+00015ae0: 362c 2d39 3233 2e30 3520 3130 3739 2e31 6,-923.05 1079.1\n+00015af0: 2c2d 3930 352e 3231 2031 3036 312e 3434 ,-905.21 1061.44\n+00015b00: 2c2d 3838 332e 3339 2031 3034 392e 3331 ,-883.39 1049.31\n+00015b10: 2c2d 3836 372e 3834 222f 3e0a 3c70 6f6c ,-867.84\"/>.<pol\n+00015b20: 7967 6f6e 2066 696c 6c3d 2223 6266 6266 ygon fill=\"#bfbf\n+00015b30: 6266 2220 7374 726f 6b65 3d22 2362 6662 bf\" stroke=\"#bfb\n+00015b40: 6662 6622 2070 6f69 6e74 733d 2231 3035 fbf\" points=\"105\n+00015b50: 322e 3036 2c2d 3836 352e 3639 2031 3034 2.06,-865.69 104\n+00015b60: 332e 3138 2c2d 3835 392e 3932 2031 3034 3.18,-859.92 104\n+00015b70: 362e 3532 2c2d 3836 392e 3937 2031 3035 6.52,-869.97 105\n+00015b80: 322e 3036 2c2d 3836 352e 3639 222f 3e0a 2.06,-865.69\"/>.\n+00015b90: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+00015ba0: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+00015bb0: 616e 6126 2334 353b 2667 743b 6d6f 6475 ana->modu\n+00015bc0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+00015bd0: 6473 7061 6e20 2d2d 3e0a 3c67 2069 643d dspan -->.<g id=\n+00015be0: 2265 6467 6531 3338 2220 636c 6173 733d \"edge138\" class=\n+00015bf0: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+00015c00: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00015c10: 735f 676d 7861 6e61 2623 3435 3b26 6774 s_gmxana->\n+00015c20: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00015c30: 6163 735f 6d64 7370 616e 3c2f 7469 746c acs_mdspan</titl\n+00015c40: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00015c50: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n+00015c60: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n+00015c70: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+00015c80: 4d31 3736 372e 3439 2c2d 3132 3831 2e32 M1767.49,-1281.2\n+00015c90: 3443 3137 3836 2e37 392c 2d31 3237 382e 4C1786.79,-1278.\n+00015ca0: 3634 2031 3831 312e 3735 2c2d 3132 3735 64 1811.75,-1275\n+00015cb0: 2e35 2031 3833 342c 2d31 3237 332e 3420 .5 1834,-1273.4 \n+00015cc0: 3139 3830 2e35 352c 2d31 3235 392e 3537 1980.55,-1259.57\n+00015cd0: 2032 3438 372c 2d31 3330 392e 3320 3234 2487,-1309.3 24\n+00015ce0: 3837 2c2d 3131 3632 2e31 2032 3438 372c 87,-1162.1 2487,\n+00015cf0: 2d31 3136 322e 3120 3234 3837 2c2d 3131 -1162.1 2487,-11\n+00015d00: 3632 2e31 2032 3438 372c 2d31 3039 372e 62.1 2487,-1097.\n+00015d10: 3233 2032 3438 372c 2d38 3932 2e36 3820 23 2487,-892.68 \n+00015d20: 3236 3238 2c2d 3836 332e 3638 2032 3632 2628,-863.68 262\n+00015d30: 382c 2d36 3539 2e31 3420 3236 3238 2c2d 8,-659.14 2628,-\n+00015d40: 3635 392e 3134 2032 3632 382c 2d36 3539 659.14 2628,-659\n+00015d50: 2e31 3420 3236 3238 2c2d 3430 352e 3636 .14 2628,-405.66\n+00015d60: 2032 3632 382c 2d33 3232 2e32 3420 3236 2628,-322.24 26\n+00015d70: 3438 2c2d 3330 322e 3436 2032 3634 382c 48,-302.46 2648,\n+00015d80: 2d32 3139 2e30 3520 3236 3438 2c2d 3231 -219.05 2648,-21\n+00015d90: 392e 3035 2032 3634 382c 2d32 3139 2e30 9.05 2648,-219.0\n+00015da0: 3520 3236 3438 2c2d 3135 342e 3138 2032 5 2648,-154.18 2\n+00015db0: 3634 382c 2d31 3230 2e34 3120 3236 3631 648,-120.41 2661\n+00015dc0: 2e39 342c 2d31 3032 2e36 3820 3236 3338 .94,-102.68 2638\n+00015dd0: 2c2d 3738 2e38 3720 3235 3931 2e39 382c ,-78.87 2591.98,\n+00015de0: 2d33 332e 3039 2032 3339 352e 3135 2c2d -33.09 2395.15,-\n+00015df0: 3238 2e39 3620 3233 3034 2e33 2c2d 3239 28.96 2304.3,-29\n+00015e00: 2e35 3922 2f3e 0a3c 706f 6c79 676f 6e20 .59\"/>.<polygon \n+00015e10: 6669 6c6c 3d22 2332 3832 6663 6322 2073 fill=\"#282fcc\" s\n+00015e20: 7472 6f6b 653d 2223 3238 3266 6363 2220 troke=\"#282fcc\" \n+00015e30: 706f 696e 7473 3d22 3233 3034 2e32 352c points=\"2304.25,\n+00015e40: 2d32 362e 3039 2032 3239 342e 3238 2c2d -26.09 2294.28,-\n+00015e50: 3239 2e36 3820 3233 3034 2e33 312c 2d33 29.68 2304.31,-3\n+00015e60: 332e 3039 2032 3330 342e 3235 2c2d 3236 3.09 2304.25,-26\n+00015e70: 2e30 3922 2f3e 0a3c 2f67 3e0a 3c21 2d2d .09\"/>.</g>.<!--\n+00015e80: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+00015e90: 6163 735f 676d 7861 6e61 2623 3435 3b26 acs_gmxana-&\n+00015ea0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00015eb0: 6f6d 6163 735f 6c69 7374 6564 5f66 6f72 omacs_listed_for\n+00015ec0: 6365 7320 2d2d 3e0a 3c67 2069 643d 2265 ces -->.<g id=\"e\n+00015ed0: 6467 6531 3331 2220 636c 6173 733d 2265 dge131\" class=\"e\n+00015ee0: 6467 6522 3e0a 3c74 6974 6c65 3e6d 6f64 dge\">.<title>mod\n+00015ef0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00015f00: 676d 7861 6e61 2623 3435 3b26 6774 3b6d gmxana->m\n+00015f10: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00015f20: 735f 6c69 7374 6564 5f66 6f72 6365 733c s_listed_forces<\n+00015f30: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00015f40: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00015f50: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n+00015f60: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n+00015f70: 2220 643d 224d 3137 3631 2e35 2c2d 3132 \" d=\"M1761.5,-12\n+00015f80: 3737 2e36 3543 3137 3833 2e35 2c2d 3132 77.65C1783.5,-12\n+00015f90: 3639 2e38 3920 3138 3134 2e36 382c 2d31 69.89 1814.68,-1\n+00015fa0: 3235 362e 3535 2031 3833 372c 2d31 3233 256.55 1837,-123\n+00015fb0: 372e 3420 3230 3633 2e33 382c 2d31 3034 7.4 2063.38,-104\n+00015fc0: 332e 3135 2032 3134 372e 3536 2c2d 3936 3.15 2147.56,-96\n+00015fd0: 352e 3538 2032 3139 382c 2d36 3731 2e35 5.58 2198,-671.5\n+00015fe0: 3720 3232 3239 2e32 332c 2d34 3839 2e35 7 2229.23,-489.5\n+00015ff0: 3320 3231 3639 2e39 342c 2d34 3338 2e38 3 2169.94,-438.8\n+00016000: 3320 3231 3031 2c2d 3236 372e 3438 2032 3 2101,-267.48 2\n+00016010: 3038 392e 3538 2c2d 3233 392e 3120 3230 089.58,-239.1 20\n+00016020: 3839 2e38 362c 2d32 3330 2e31 3320 3230 89.86,-230.13 20\n+00016030: 3733 2c2d 3230 342e 3631 2032 3036 362e 73,-204.61 2066.\n+00016040: 3132 2c2d 3139 342e 3220 3230 3536 2e39 12,-194.2 2056.9\n+00016050: 372c 2d31 3833 2e38 3920 3230 3438 2e37 7,-183.89 2048.7\n+00016060: 322c 2d31 3735 2e34 3822 2f3e 0a3c 706f 2,-175.48\"/>.<po\n+00016070: 6c79 676f 6e20 6669 6c6c 3d22 2332 3832 lygon fill=\"#282\n+00016080: 6663 6322 2073 7472 6f6b 653d 2223 3238 fcc\" stroke=\"#28\n+00016090: 3266 6363 2220 706f 696e 7473 3d22 3230 2fcc\" points=\"20\n+000160a0: 3531 2e30 362c 2d31 3732 2e38 3820 3230 51.06,-172.88 20\n+000160b0: 3431 2e34 382c 2d31 3638 2e33 3520 3230 41.48,-168.35 20\n+000160c0: 3436 2e31 342c 2d31 3737 2e38 3620 3230 46.14,-177.86 20\n+000160d0: 3531 2e30 362c 2d31 3732 2e38 3822 2f3e 51.06,-172.88\"/>\n+000160e0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n+000160f0: 655f 7372 635f 6772 6f6d 6163 735f 676d e_src_gromacs_gm\n+00016100: 7861 6e61 2623 3435 3b26 6774 3b6d 6f64 xana->mod\n+00016110: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00016120: 7261 6e64 6f6d 202d 2d3e 0a3c 6720 6964 random -->.<g id\n+00016130: 3d22 6564 6765 3133 3422 2063 6c61 7373 =\"edge134\" class\n+00016140: 3d22 6564 6765 223e 0a3c 7469 746c 653e =\"edge\">.<title>\n+00016150: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00016160: 6373 5f67 6d78 616e 6126 2334 353b 2667 cs_gmxana-&g\n+00016170: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00016180: 6d61 6373 5f72 616e 646f 6d3c 2f74 6974 macs_random</tit\n+00016190: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+000161a0: 6e6f 6e65 2220 7374 726f 6b65 3d22 626c none\" stroke=\"bl\n+000161b0: 6163 6b22 2073 7472 6f6b 652d 6461 7368 ack\" stroke-dash\n+000161c0: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n+000161d0: 3137 3639 2e34 392c 2d31 3238 332e 3238 1769.49,-1283.28\n+000161e0: 4331 3837 392e 3934 2c2d 3132 3734 2e39 C1879.94,-1274.9\n+000161f0: 3920 3232 3230 2e35 322c 2d31 3234 382e 9 2220.52,-1248.\n+00016200: 3832 2032 3236 392c 2d31 3233 372e 3420 82 2269,-1237.4 \n+00016210: 3233 3532 2e36 312c 2d31 3231 372e 3720 2352.61,-1217.7 \n+00016220: 3234 3437 2c2d 3132 3438 2032 3434 372c 2447,-1248 2447,\n+00016230: 2d31 3136 322e 3120 3234 3437 2c2d 3131 -1162.1 2447,-11\n+00016240: 3632 2e31 2032 3434 372c 2d31 3136 322e 62.1 2447,-1162.\n+00016250: 3120 3234 3437 2c2d 3130 3937 2e32 3320 1 2447,-1097.23 \n+00016260: 3234 3437 2c2d 3839 392e 3232 2032 3532 2447,-899.22 252\n+00016270: 382c 2d38 3537 2e31 3420 3235 3238 2c2d 8,-857.14 2528,-\n+00016280: 3635 392e 3134 2032 3532 382c 2d36 3539 659.14 2528,-659\n+00016290: 2e31 3420 3235 3238 2c2d 3635 392e 3134 .14 2528,-659.14\n+000162a0: 2032 3532 382c 2d33 3432 2e37 3920 3235 2528,-342.79 25\n+000162b0: 3238 2c2d 3235 302e 3439 2032 3531 322e 28,-250.49 2512.\n+000162c0: 3639 2c2d 3232 362e 3433 2032 3437 362c 69,-226.43 2476,\n+000162d0: 2d31 3431 2e37 3420 3234 3731 2e39 362c -141.74 2471.96,\n+000162e0: 2d31 3332 2e34 3220 3234 3636 2e35 352c -132.42 2466.55,\n+000162f0: 2d31 3232 2e36 3220 3234 3631 2e35 352c -122.62 2461.55,\n+00016300: 2d31 3134 2e33 222f 3e0a 3c70 6f6c 7967 -114.3\"/>.<polyg\n+00016310: 6f6e 2066 696c 6c3d 2262 6c61 636b 2220 on fill=\"black\" \n+00016320: 7374 726f 6b65 3d22 626c 6163 6b22 2070 stroke=\"black\" p\n+00016330: 6f69 6e74 733d 2232 3436 342e 3433 2c2d oints=\"2464.43,-\n+00016340: 3131 322e 3320 3234 3536 2e32 2c2d 3130 112.3 2456.2,-10\n+00016350: 352e 3634 2032 3435 382e 3438 2c2d 3131 5.64 2458.48,-11\n+00016360: 352e 3938 2032 3436 342e 3433 2c2d 3131 5.98 2464.43,-11\n+00016370: 322e 3322 2f3e 0a3c 2f67 3e0a 3c21 2d2d 2.3\"/>.</g>.<!--\n+00016380: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+00016390: 6163 735f 7374 6174 6973 7469 6373 202d acs_statistics -\n+000163a0: 2d3e 0a3c 6720 6964 3d22 6e6f 6465 3433 ->.<g id=\"node43\n+000163b0: 2220 636c 6173 733d 226e 6f64 6522 3e0a \" class=\"node\">.\n+000163c0: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n+000163d0: 635f 6772 6f6d 6163 735f 7374 6174 6973 c_gromacs_statis\n+000163e0: 7469 6373 3c2f 7469 746c 653e 0a3c 656c tics..stati\n+000164a0: 7374 6963 733c 2f74 6578 743e 0a3c 2f67 stics....\n+00016520: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00016530: 6373 5f67 6d78 616e 6126 2334 353b 2667 cs_gmxana-&g\n+00016540: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00016550: 6d61 6373 5f73 7461 7469 7374 6963 733c macs_statistics<\n+00016560: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00016570: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00016580: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n+00016590: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n+000165a0: 2220 643d 224d 3137 3632 2e37 392c 2d31 \" d=\"M1762.79,-1\n+000165b0: 3237 382e 3531 4331 3738 332e 3737 2c2d 278.51C1783.77,-\n+000165c0: 3132 3731 2e34 3820 3138 3131 2e35 322c 1271.48 1811.52,\n+000165d0: 2d31 3235 382e 3733 2031 3832 372c 2d31 -1258.73 1827,-1\n+000165e0: 3233 372e 3420 3138 3634 2e33 362c 2d31 237.4 1864.36,-1\n+000165f0: 3138 352e 3932 2031 3931 352e 3135 2c2d 185.92 1915.15,-\n+00016600: 3732 362e 3632 2031 3932 362e 3633 2c2d 726.62 1926.63,-\n+00016610: 3631 382e 3833 222f 3e0a 3c70 6f6c 7967 618.83\"/>.<polyg\n+00016620: 6f6e 2066 696c 6c3d 2223 3238 3266 6363 on fill=\"#282fcc\n+00016630: 2220 7374 726f 6b65 3d22 2332 3832 6663 \" stroke=\"#282fc\n+00016640: 6322 2070 6f69 6e74 733d 2231 3933 302e c\" points=\"1930.\n+00016650: 3133 2c2d 3631 392e 3036 2031 3932 372e 13,-619.06 1927.\n+00016660: 372c 2d36 3038 2e37 3520 3139 3233 2e31 7,-608.75 1923.1\n+00016670: 372c 2d36 3138 2e33 3220 3139 3330 2e31 7,-618.32 1930.1\n+00016680: 332c 2d36 3139 2e30 3622 2f3e 0a3c 2f67 3,-619.06\"/>.</g\n+00016690: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+000166a0: 635f 6772 6f6d 6163 735f 676d 7861 6e61 c_gromacs_gmxana\n+000166b0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+000166c0: 7372 635f 6772 6f6d 6163 735f 636f 6d6d src_gromacs_comm\n+000166d0: 616e 646c 696e 6520 2d2d 3e0a 3c67 2069 andline -->.<g i\n+000166e0: 643d 2265 6467 6531 3330 2220 636c 6173 d=\"edge130\" clas\n+000166f0: 733d 2265 6467 6522 3e0a 3c74 6974 6c65 s=\"edge\">.<title\n+00016700: 3e6d 6f64 756c 655f 7372 635f 6772 6f6d >module_src_grom\n+00016710: 6163 735f 676d 7861 6e61 2623 3435 3b26 acs_gmxana-&\n+00016720: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00016730: 6f6d 6163 735f 636f 6d6d 616e 646c 696e omacs_commandlin\n+00016740: 653c 2f74 6974 6c65 3e0a 3c70 6174 6820 e......module_src_gro\n-00016ae0: 6d61 6373 5f6d 6472 756e 2623 3435 3b26 macs_mdrun-&\n-00016af0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-00016b00: 6f6d 6163 735f 6d64 7479 7065 733c 2f74 omacs_mdtypes...\n-00016c40: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...mo\n-00016cb0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00016cc0: 5f6d 6472 756e 2623 3435 3b26 6774 3b6d _mdrun->m\n-00016cd0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00016ce0: 735f 646f 6d64 6563 3c2f 7469 746c 653e s_domdec\n-00016cf0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ....\n-00016e00: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..m\n-00016e50: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00016e60: 735f 6170 706c 6965 645f 666f 7263 6573 s_applied_forces\n-00016e70: 3c2f 7469 746c 653e 0a3c 656c 6c69 7073 ..<\n-00016ed0: 7465 7874 2074 6578 742d 616e 6368 6f72 text text-anchor\n-00016ee0: 3d22 6d69 6464 6c65 2220 783d 2232 3138 =\"middle\" x=\"218\n-00016ef0: 3022 2079 3d22 2d31 3532 2e36 3822 2066 0\" y=\"-152.68\" f\n-00016f00: 6f6e 742d 6661 6d69 6c79 3d22 4672 6565 ont-family=\"Free\n-00016f10: 5361 6e73 2220 666f 6e74 2d73 697a 653d Sans\" font-size=\n-00016f20: 2231 302e 3030 223e 6170 706c 6965 645f \"10.00\">applied_\n-00016f30: 666f 7263 6573 3c2f 7465 7874 3e0a 3c2f forces...<\n-00016f90: 6720 6964 3d22 6564 6765 3135 3122 2063 g id=\"edge151\" c\n-00016fa0: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00016fc0: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n-00016fd0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00016fe0: 6772 6f6d 6163 735f 6170 706c 6965 645f gromacs_applied_\n-00016ff0: 666f 7263 6573 3c2f 7469 746c 653e 0a3c forces.<\n-00017000: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-00017010: 2073 7472 6f6b 653d 2272 6564 2220 643d stroke=\"red\" d=\n-00017020: 224d 3134 3838 2e31 2c2d 3231 342e 3531 \"M1488.1,-214.51\n-00017030: 4331 3539 362e 3539 2c2d 3230 352e 3336 C1596.59,-205.36\n-00017040: 2031 3936 382e 3934 2c2d 3137 332e 3937 1968.94,-173.97\n-00017050: 2032 3131 372e 3739 2c2d 3136 312e 3432 2117.79,-161.42\n-00017060: 222f 3e0a 3c70 6f6c 7967 6f6e 2066 696c \"/>..<\n-000170d0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modu\n-00017140: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-00017150: 6472 756e 2623 3435 3b26 6774 3b6d 6f64 drun->mod\n-00017160: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00017170: 6e62 6e78 6d3c 2f74 6974 6c65 3e0a 3c70 nbnxm......m\n+00016930: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00016940: 735f 676d 7861 6e61 2623 3435 3b26 6774 s_gmxana->\n+00016950: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00016960: 6163 735f 6170 706c 6965 645f 666f 7263 acs_applied_forc\n+00016970: 6573 5f61 7768 3c2f 7469 746c 653e 0a3c es_awh.<\n+00016980: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+00016990: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n+000169a0: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n+000169b0: 6179 3d22 352c 3222 2064 3d22 4d31 3736 ay=\"5,2\" d=\"M176\n+000169c0: 392e 3332 2c2d 3132 3833 2e33 3843 3139 9.32,-1283.38C19\n+000169d0: 3038 2e39 352c 2d31 3237 322e 3935 2032 08.95,-1272.95 2\n+000169e0: 3432 372c 2d31 3232 392e 3638 2032 3432 427,-1229.68 242\n+000169f0: 372c 2d31 3136 322e 3120 3234 3237 2c2d 7,-1162.1 2427,-\n+00016a00: 3131 3632 2e31 2032 3432 372c 2d31 3136 1162.1 2427,-116\n+00016a10: 322e 3120 3234 3237 2c2d 3130 3937 2e32 2.1 2427,-1097.2\n+00016a20: 3320 3234 3237 2c2d 3130 3134 2e32 3920 3 2427,-1014.29 \n+00016a30: 3234 3238 2c2d 3939 332e 3535 2032 3432 2428,-993.55 242\n+00016a40: 382c 2d39 3130 2e36 3220 3234 3238 2c2d 8,-910.62 2428,-\n+00016a50: 3931 302e 3632 2032 3432 382c 2d39 3130 910.62 2428,-910\n+00016a60: 2e36 3220 3234 3238 2c2d 3738 322e 3838 .62 2428,-782.88\n+00016a70: 2032 3432 382c 2d35 3532 2e36 3520 3234 2428,-552.65 24\n+00016a80: 3236 2c2d 3439 322e 3231 2032 3337 362c 26,-492.21 2376,\n+00016a90: 2d32 3637 2e34 3820 3233 3639 2e37 342c -267.48 2369.74,\n+00016aa0: 2d32 3339 2e33 3420 3233 3730 2e34 352c -239.34 2370.45,\n+00016ab0: 2d32 3331 2e34 3820 3233 3630 2c2d 3230 -231.48 2360,-20\n+00016ac0: 342e 3631 2032 3335 362e 3333 2c2d 3139 4.61 2356.33,-19\n+00016ad0: 352e 3137 2032 3335 312e 3234 2c2d 3138 5.17 2351.24,-18\n+00016ae0: 352e 3234 2032 3334 362e 3533 2c2d 3137 5.24 2346.53,-17\n+00016af0: 362e 3835 222f 3e0a 3c70 6f6c 7967 6f6e 6.85\"/>..\n+00016b70: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...\n+00016bc0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00016bd0: 6373 5f61 7070 6c69 6564 5f66 6f72 6365 cs_applied_force\n+00016be0: 733c 2f74 6974 6c65 3e0a 3c65 6c6c 6970 s..\n+00016c40: 3c74 6578 7420 7465 7874 2d61 6e63 686f applied\n+00016ca0: 5f66 6f72 6365 733c 2f74 6578 743e 0a3c _forces.<\n+00016cb0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modu\n+00016d30: 6c65 5f73 7263 5f67 726f 6d61 6373 5f61 le_src_gromacs_a\n+00016d40: 7070 6c69 6564 5f66 6f72 6365 7326 2334 pplied_forces\n+00016d50: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00016d60: 5f70 726f 6772 616d 735f 6d64 7275 6e5f _programs_mdrun_\n+00016d70: 7465 7374 733c 2f74 6974 6c65 3e0a 3c70 tests.\n+00016e10: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....\n+00016ef0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00016f00: 6373 5f61 7070 6c69 6564 5f66 6f72 6365 cs_applied_force\n+00016f10: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+00016f20: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+00016f30: 6c69 623c 2f74 6974 6c65 3e0a 3c70 6174 lib......module_src_grom\n+00017150: 6163 735f 6170 706c 6965 645f 666f 7263 acs_applied_forc\n+00017160: 6573 2623 3435 3b26 6774 3b6d 6f64 756c es->modul\n+00017170: 655f 7372 635f 6772 6f6d 6163 735f 6861 e_src_gromacs_ha\n+00017180: 7264 7761 7265 3c2f 7469 746c 653e 0a3c rdware.<\n+00017190: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+000171a0: 2073 7472 6f6b 653d 2272 6564 2220 643d stroke=\"red\" d=\n+000171b0: 224d 3136 3937 2e38 382c 2d31 3638 2e36 \"M1697.88,-168.6\n+000171c0: 3443 3137 3035 2e33 362c 2d31 3738 2e32 4C1705.36,-178.2\n+000171d0: 3520 3137 3135 2e37 312c 2d31 3932 2031 5 1715.71,-192 1\n+000171e0: 3732 342c 2d32 3034 2e36 3120 3138 3230 724,-204.61 1820\n+000171f0: 2e31 372c 2d33 3530 2e39 3520 3137 3933 .17,-350.95 1793\n+00017200: 2e35 322c 2d34 3235 2e37 3720 3139 3231 .52,-425.77 1921\n+00017210: 2c2d 3534 352e 3833 2031 3934 372e 3034 ,-545.83 1947.04\n+00017220: 2c2d 3537 302e 3336 2031 3937 342e 3139 ,-570.36 1974.19\n+00017230: 2c2d 3535 312e 3420 3139 3933 2c2d 3538 ,-551.4 1993,-58\n+00017240: 312e 3833 2032 3031 352e 3236 2c2d 3631 1.83 2015.26,-61\n+00017250: 372e 3835 2031 3938 392e 3439 2c2d 3634 7.85 1989.49,-64\n+00017260: 302e 3234 2031 3936 312c 2d36 3731 2e35 0.24 1961,-671.5\n+00017270: 3720 3137 3030 2e30 362c 2d39 3538 2e35 7 1700.06,-958.5\n+00017280: 3620 3135 3439 2e35 322c 2d39 3531 2e36 6 1549.52,-951.6\n+00017290: 3520 3131 3734 2c2d 3130 3438 2e37 3920 5 1174,-1048.79 \n+000172a0: 3130 3935 2e38 2c2d 3130 3639 2e30 3220 1095.8,-1069.02 \n+000172b0: 3835 382e 3738 2c2d 3130 3836 2e39 3620 858.78,-1086.96 \n+000172c0: 3735 352e 3732 2c2d 3130 3934 2e30 3322 755.72,-1094.03\"\n+000172d0: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />....<\n-00017390: 6720 6964 3d22 6564 6765 3133 3422 2063 g id=\"edge134\" c\n-000173a0: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-000173c0: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n-000173d0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-000173e0: 6772 6f6d 6163 735f 6577 616c 643c 2f74 gromacs_ewald...\n-000174f0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ..\n-00017540: 3c67 2069 643d 2265 6467 6531 3336 2220 .module_src_\n-00017570: 6772 6f6d 6163 735f 6d64 7275 6e26 2334 gromacs_mdrun\n-00017580: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-00017590: 5f67 726f 6d61 6373 5f6c 6973 7465 645f _gromacs_listed_\n-000175a0: 666f 7263 6573 3c2f 7469 746c 653e 0a3c forces.<\n-000175b0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-000175c0: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n-000175d0: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n-000175e0: 6179 3d22 352c 3222 2064 3d22 4d31 3432 ay=\"5,2\" d=\"M142\n-000175f0: 372e 3537 2c2d 3231 342e 3833 4331 3339 7.57,-214.83C139\n-00017600: 302e 3931 2c2d 3231 322e 3220 3133 3237 0.91,-212.2 1327\n-00017610: 2e34 372c 2d32 3037 2e37 3820 3132 3733 .47,-207.78 1273\n-00017620: 2c2d 3230 342e 3631 2039 3437 2e38 322c ,-204.61 947.82,\n-00017630: 2d31 3835 2e36 3920 3836 352e 3835 2c2d -185.69 865.85,-\n-00017640: 3139 322e 3439 2035 3431 2c2d 3136 382e 192.49 541,-168.\n-00017650: 3631 2035 3137 2e37 332c 2d31 3636 2e39 61 517.73,-166.9\n-00017660: 2034 3932 2e31 312c 2d31 3634 2e34 3920 492.11,-164.49 \n-00017670: 3437 302e 3032 2c2d 3136 322e 3235 222f 470.02,-162.25\"/\n-00017680: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >..<\n-000176f0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...mod\n-00017760: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00017770: 6d64 7275 6e26 2334 353b 2667 743b 6d6f mdrun->mo\n-00017780: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00017790: 5f72 616e 646f 6d3c 2f74 6974 6c65 3e0a _random.\n-000177a0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ....<\n-00017900: 6720 6964 3d22 6564 6765 3134 3822 2063 g id=\"edge148\" c\n-00017910: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00017930: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n-00017940: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00017950: 6772 6f6d 6163 735f 636f 6d70 6174 3c2f gromacs_compat..\n-00017ab0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ...<\n-00017b00: 6720 6964 3d22 6564 6765 3132 3922 2063 g id=\"edge129\" c\n-00017b10: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00017b30: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n-00017b40: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00017b50: 6772 6f6d 6163 735f 636f 6d6d 616e 646c gromacs_commandl\n-00017b60: 696e 653c 2f74 6974 6c65 3e0a 3c70 6174 ine......module\n-00018020: 5f73 7263 5f67 726f 6d61 6373 5f6d 6472 _src_gromacs_mdr\n-00018030: 756e 2623 3435 3b26 6774 3b6d 6f64 756c un->modul\n-00018040: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n-00018050: 736b 6173 7369 676e 6d65 6e74 3c2f 7469 skassignment</ti\n-00018060: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n-00018070: 226e 6f6e 6522 2073 7472 6f6b 653d 2272 \"none\" stroke=\"r\n-00018080: 6564 2220 643d 224d 3134 3739 2e39 372c ed\" d=\"M1479.97,\n-00018090: 2d32 3237 2e38 3843 3135 3335 2e39 382c -227.88C1535.98,\n-000180a0: 2d32 3530 2e36 2031 3638 302e 3537 2c2d -250.6 1680.57,-\n-000180b0: 3331 302e 3720 3136 3933 2c2d 3333 302e 310.7 1693,-330.\n-000180c0: 3335 2031 3730 322e 3934 2c2d 3334 362e 35 1702.94,-346.\n-000180d0: 3036 2031 3730 302e 3333 2c2d 3336 372e 06 1700.33,-367.\n-000180e0: 3520 3136 3936 2e30 322c 2d33 3833 2e34 5 1696.02,-383.4\n-000180f0: 3822 2f3e 0a3c 706f 6c79 676f 6e20 6669 8\"/>.<polygon fi\n-00018100: 6c6c 3d22 7265 6422 2073 7472 6f6b 653d ll=\"red\" stroke=\n-00018110: 2272 6564 2220 706f 696e 7473 3d22 3136 \"red\" points=\"16\n-00018120: 3932 2e36 362c 2d33 3832 2e34 3920 3136 92.66,-382.49 16\n-00018130: 3933 2e30 362c 2d33 3933 2e30 3820 3136 93.06,-393.08 16\n-00018140: 3939 2e33 352c 2d33 3834 2e35 3620 3136 99.35,-384.56 16\n-00018150: 3932 2e36 362c 2d33 3832 2e34 3922 2f3e 92.66,-382.49\"/>\n-00018160: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n-00018170: 655f 7372 635f 6772 6f6d 6163 735f 7265 e_src_gromacs_re\n-00018180: 7374 7261 696e 7420 2d2d 3e0a 3c67 2069 straint -->.<g i\n-00018190: 643d 226e 6f64 6534 3722 2063 6c61 7373 d=\"node47\" class\n-000181a0: 3d22 6e6f 6465 223e 0a3c 7469 746c 653e =\"node\">.<title>\n-000181b0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-000181c0: 6373 5f72 6573 7472 6169 6e74 3c2f 7469 cs_restraint</ti\n-000181d0: 746c 653e 0a3c 6720 6964 3d22 615f 6e6f tle>.<g id=\"a_no\n-000181e0: 6465 3437 223e 3c61 2078 6c69 6e6b 3a68 de47\"><a xlink:h\n-000181f0: 7265 663d 2267 726f 7570 5f5f 6d6f 6475 ref=\"group__modu\n-00018200: 6c65 5f5f 7265 7374 7261 696e 742e 7868 le__restraint.xh\n-00018210: 746d 6c22 2074 6172 6765 743d 225f 746f tml\" target=\"_to\n-00018220: 7022 2078 6c69 6e6b 3a74 6974 6c65 3d22 p\" xlink:title=\"\n-00018230: 7265 7374 7261 696e 7422 3e0a 3c65 6c6c restraint\">.<ell\n-00018240: 6970 7365 2066 696c 6c3d 226e 6f6e 6522 ipse fill=\"none\"\n-00018250: 2073 7472 6f6b 653d 2262 6c61 636b 2220 stroke=\"black\" \n-00018260: 6378 3d22 3234 3132 2220 6379 3d22 2d31 cx=\"2412\" cy=\"-1\n-00018270: 3535 2e31 3822 2072 783d 2233 362e 3534 55.18\" rx=\"36.54\n-00018280: 2220 7279 3d22 3133 2e33 3722 2f3e 0a3c \" ry=\"13.37\"/>.<\n-00018290: 7465 7874 2074 6578 742d 616e 6368 6f72 text text-anchor\n-000182a0: 3d22 6d69 6464 6c65 2220 783d 2232 3431 =\"middle\" x=\"241\n-000182b0: 3222 2079 3d22 2d31 3532 2e36 3822 2066 2\" y=\"-152.68\" f\n-000182c0: 6f6e 742d 6661 6d69 6c79 3d22 4672 6565 ont-family=\"Free\n-000182d0: 5361 6e73 2220 666f 6e74 2d73 697a 653d Sans\" font-size=\n-000182e0: 2231 302e 3030 223e 7265 7374 7261 696e \"10.00\">restrain\n-000182f0: 743c 2f74 6578 743e 0a3c 2f61 3e0a 3c2f t</text>.</a>.</\n-00018300: 673e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 g>.</g>.<!-- mod\n-00018310: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00018320: 6d64 7275 6e26 2334 353b 2667 743b 6d6f mdrun->mo\n-00018330: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00018340: 5f72 6573 7472 6169 6e74 202d 2d3e 0a3c _restraint -->.<\n-00018350: 6720 6964 3d22 6564 6765 3134 3522 2063 g id=\"edge145\" c\n-00018360: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.<ti\n-00018370: 746c 653e 6d6f 6475 6c65 5f73 7263 5f67 tle>module_src_g\n-00018380: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n-00018390: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-000183a0: 6772 6f6d 6163 735f 7265 7374 7261 696e gromacs_restrain\n-000183b0: 743c 2f74 6974 6c65 3e0a 3c70 6174 6820 t......modul\n-00018550: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-00018560: 7275 6e26 2334 353b 2667 743b 6d6f 6475 run->modu\n-00018570: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-00018580: 6472 756e 7574 696c 6974 793c 2f74 6974 drunutility</tit\n-00018590: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n-000185a0: 6e6f 6e65 2220 7374 726f 6b65 3d22 2332 none\" stroke=\"#2\n-000185b0: 3832 6663 6322 2064 3d22 4d31 3438 342e 82fcc\" d=\"M1484.\n-000185c0: 3239 2c2d 3232 352e 3435 4331 3530 342e 29,-225.45C1504.\n-000185d0: 3436 2c2d 3233 322e 3536 2031 3533 302e 46,-232.56 1530.\n-000185e0: 3239 2c2d 3234 352e 3937 2031 3534 322c 29,-245.97 1542,\n-000185f0: 2d32 3637 2e34 3820 3135 3535 2e35 372c -267.48 1555.57,\n-00018600: 2d32 3932 2e33 3920 3135 3335 2e31 392c -292.39 1535.19,\n-00018610: 2d33 3032 2e32 3920 3135 3331 2c2d 3333 -302.29 1531,-33\n-00018620: 302e 3335 2031 3532 342e 3935 2c2d 3337 0.35 1524.95,-37\n-00018630: 302e 3836 2031 3532 362e 3939 2c2d 3338 0.86 1526.99,-38\n-00018640: 372e 3635 2031 3535 322c 2d34 3230 2e30 7.65 1552,-420.0\n-00018650: 3920 3135 3639 2e38 342c 2d34 3433 2e32 9 1569.84,-443.2\n-00018660: 3320 3135 3837 2e32 332c 2d34 3334 2e35 3 1587.23,-434.5\n-00018670: 3820 3136 3037 2c2d 3435 362e 3039 2031 8 1607,-456.09 1\n-00018680: 3635 302c 2d35 3032 2e38 3620 3136 3533 650,-502.86 1653\n-00018690: 2e30 362c 2d35 3232 2e32 3120 3136 3735 .06,-522.21 1675\n-000186a0: 2c2d 3538 312e 3833 2031 3638 312e 3331 ,-581.83 1681.31\n-000186b0: 2c2d 3539 382e 3939 2031 3638 352e 3435 ,-598.99 1685.45\n-000186c0: 2c2d 3631 392e 3331 2031 3638 362e 3536 ,-619.31 1686.56\n-000186d0: 2c2d 3633 342e 3532 222f 3e0a 3c70 6f6c ,-634.52\"/>.<pol\n-000186e0: 7967 6f6e 2066 696c 6c3d 2223 3238 3266 ygon fill=\"#282f\n-000186f0: 6363 2220 7374 726f 6b65 3d22 2332 3832 cc\" stroke=\"#282\n-00018700: 6663 6322 2070 6f69 6e74 733d 2231 3638 fcc\" points=\"168\n-00018710: 332e 3036 2c2d 3633 342e 3636 2031 3638 3.06,-634.66 168\n-00018720: 362e 3832 2c2d 3634 342e 3537 2031 3639 6.82,-644.57 169\n-00018730: 302e 3036 2c2d 3633 342e 3438 2031 3638 0.06,-634.48 168\n-00018740: 332e 3036 2c2d 3633 342e 3636 222f 3e0a 3.06,-634.66\"/>.\n-00018750: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n-00018760: 5f73 7263 5f67 726f 6d61 6373 5f6d 6472 _src_gromacs_mdr\n-00018770: 756e 2623 3435 3b26 6774 3b6d 6f64 756c un->modul\n-00018780: 655f 7372 635f 6772 6f6d 6163 735f 6170 e_src_gromacs_ap\n-00018790: 706c 6965 645f 666f 7263 6573 5f61 7768 plied_forces_awh\n-000187a0: 202d 2d3e 0a3c 6720 6964 3d22 6564 6765 -->.<g id=\"edge\n-000187b0: 3134 3722 2063 6c61 7373 3d22 6564 6765 147\" class=\"edge\n-000187c0: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n-000187d0: 5f73 7263 5f67 726f 6d61 6373 5f6d 6472 _src_gromacs_mdr\n-000187e0: 756e 2623 3435 3b26 6774 3b6d 6f64 756c un->modul\n-000187f0: 655f 7372 635f 6772 6f6d 6163 735f 6170 e_src_gromacs_ap\n-00018800: 706c 6965 645f 666f 7263 6573 5f61 7768 plied_forces_awh\n-00018810: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 .....<\n-00018960: 6720 6964 3d22 6564 6765 3136 3022 2063 g id=\"edge160\" c\n-00018970: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00018990: 726f 6d61 6373 5f67 6d78 616e 6126 2334 romacs_gmxana\n-000189a0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-000189b0: 5f67 726f 6d61 6373 5f63 6f72 7265 6c61 _gromacs_correla\n-000189c0: 7469 6f6e 6675 6e63 7469 6f6e 733c 2f74 tionfunctions.....<\n-00018b10: 6720 6964 3d22 6564 6765 3135 3322 2063 g id=\"edge153\" c\n-00018b20: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00018b40: 726f 6d61 6373 5f67 6d78 616e 6126 2334 romacs_gmxana\n-00018b50: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-00018b60: 5f67 726f 6d61 6373 5f66 6674 3c2f 7469 _gromacs_fft......module_src_gr\n-00018d10: 6f6d 6163 735f 676d 7861 6e61 2623 3435 omacs_gmxana-\n-00018d20: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00018d30: 6772 6f6d 6163 735f 676d 786c 6962 3c2f gromacs_gmxlib...<\n-00018ee0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_gro\n-00018f60: 6d61 6373 5f67 6d78 616e 6126 2334 353b macs_gmxana-\n-00018f70: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00018f80: 726f 6d61 6373 5f74 7261 6a65 6374 6f72 romacs_trajector\n-00018f90: 793c 2f74 6974 6c65 3e0a 3c70 6174 6820 y...\n-00019160: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module\n-000191d0: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n-000191e0: 616e 6126 2334 353b 2667 743b 6d6f 6475 ana->modu\n-000191f0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-00019200: 646c 6962 3c2f 7469 746c 653e 0a3c 7061 dlib....\n-00019360: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..module\n-000193d0: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n-000193e0: 616e 6126 2334 353b 2667 743b 6d6f 6475 ana->modu\n-000193f0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f66 le_src_gromacs_f\n-00019400: 696c 6569 6f3c 2f74 6974 6c65 3e0a 3c70 ileio......module_src_gr\n-00019800: 6f6d 6163 735f 676d 7861 6e61 2623 3435 omacs_gmxana-\n-00019810: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00019820: 6772 6f6d 6163 735f 6d64 7370 616e 3c2f gromacs_mdspan..\n-000199b0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ...<\n-00019ca0: 6720 6964 3d22 6564 6765 3135 3922 2063 g id=\"edge159\" c\n-00019cb0: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00019cd0: 726f 6d61 6373 5f67 6d78 616e 6126 2334 romacs_gmxana\n-00019ce0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-00019cf0: 5f67 726f 6d61 6373 5f72 616e 646f 6d3c _gromacs_random<\n-00019d00: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>..<\n-00019ec0: 706f 6c79 676f 6e20 6669 6c6c 3d22 626c polygon fill=\"bl\n-00019ed0: 6163 6b22 2073 7472 6f6b 653d 2262 6c61 ack\" stroke=\"bla\n-00019ee0: 636b 2220 706f 696e 7473 3d22 3131 3438 ck\" points=\"1148\n-00019ef0: 2e39 332c 2d31 3037 2e35 3320 3131 3537 .93,-107.53 1157\n-00019f00: 2e37 362c 2d31 3031 2e36 3820 3131 3437 .76,-101.68 1147\n-00019f10: 2e32 312c 2d31 3030 2e37 3520 3131 3438 .21,-100.75 1148\n-00019f20: 2e39 332c 2d31 3037 2e35 3322 2f3e 0a3c .93,-107.53\"/>.<\n-00019f30: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...m\n-00019f80: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00019f90: 735f 7374 6174 6973 7469 6373 3c2f 7469 s_statistics</ti\n-00019fa0: 746c 653e 0a3c 656c 6c69 7073 6520 6669 tle>.<ellipse fi\n-00019fb0: 6c6c 3d22 2362 6662 6662 6622 2073 7472 ll=\"#bfbfbf\" str\n-00019fc0: 6f6b 653d 2262 6c61 636b 2220 6378 3d22 oke=\"black\" cx=\"\n-00019fd0: 3837 3322 2063 793d 222d 3539 352e 3237 873\" cy=\"-595.27\n-00019fe0: 2220 7278 3d22 3339 2e37 2220 7279 3d22 \" rx=\"39.7\" ry=\"\n-00019ff0: 3133 2e33 3722 2f3e 0a3c 7465 7874 2074 13.37\"/>.<text t\n-0001a000: 6578 742d 616e 6368 6f72 3d22 6d69 6464 ext-anchor=\"midd\n-0001a010: 6c65 2220 783d 2238 3733 2220 793d 222d le\" x=\"873\" y=\"-\n-0001a020: 3539 322e 3737 2220 666f 6e74 2d66 616d 592.77\" font-fam\n-0001a030: 696c 793d 2246 7265 6553 616e 7322 2066 ily=\"FreeSans\" f\n-0001a040: 6f6e 742d 7369 7a65 3d22 3130 2e30 3022 ont-size=\"10.00\"\n-0001a050: 3e73 7461 7469 7374 6963 733c 2f74 6578 >statistics</tex\n-0001a060: 743e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 t>.</g>.<!-- mod\n-0001a070: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0001a080: 676d 7861 6e61 2623 3435 3b26 6774 3b6d gmxana->m\n-0001a090: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0001a0a0: 735f 7374 6174 6973 7469 6373 202d 2d3e s_statistics -->\n-0001a0b0: 0a3c 6720 6964 3d22 6564 6765 3136 3422 .<g id=\"edge164\"\n-0001a0c0: 2063 6c61 7373 3d22 6564 6765 223e 0a3c class=\"edge\">.<\n-0001a0d0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-0001a0e0: 5f67 726f 6d61 6373 5f67 6d78 616e 6126 _gromacs_gmxana&\n-0001a0f0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0001a100: 7263 5f67 726f 6d61 6373 5f73 7461 7469 rc_gromacs_stati\n-0001a110: 7374 6963 733c 2f74 6974 6c65 3e0a 3c70 stics.\n-0001a1e0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ..<\n-0001a250: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_gr\n-0001a2d0: 6f6d 6163 735f 676d 7861 6e61 2623 3435 omacs_gmxana-\n-0001a2e0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0001a2f0: 6772 6f6d 6163 735f 636f 6d6d 616e 646c gromacs_commandl\n-0001a300: 696e 653c 2f74 6974 6c65 3e0a 3c70 6174 ine......m\n-0001a4d0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0001a4e0: 735f 676d 7861 6e61 2623 3435 3b26 6774 s_gmxana->\n-0001a4f0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-0001a500: 6163 735f 6170 706c 6965 645f 666f 7263 acs_applied_forc\n-0001a510: 6573 5f61 7768 3c2f 7469 746c 653e 0a3c es_awh.<\n-0001a520: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-0001a530: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n-0001a540: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n-0001a550: 6179 3d22 352c 3222 2064 3d22 4d37 3039 ay=\"5,2\" d=\"M709\n-0001a560: 2e30 332c 2d31 3238 342e 3136 4336 3131 .03,-1284.16C611\n-0001a570: 2e35 352c 2d31 3237 392e 3138 2033 3431 .55,-1279.18 341\n-0001a580: 2e39 2c2d 3132 3633 2e31 3920 3331 322c .9,-1263.19 312,\n-0001a590: 2d31 3233 372e 3420 3237 322e 3731 2c2d -1237.4 272.71,-\n-0001a5a0: 3132 3033 2e35 3220 3139 372c 2d38 3336 1203.52 197,-836\n-0001a5b0: 2e37 3520 3139 372c 2d37 3834 2e38 3820 .75 197,-784.88 \n-0001a5c0: 3139 372c 2d37 3834 2e38 3820 3139 372c 197,-784.88 197,\n-0001a5d0: 2d37 3834 2e38 3820 3139 372c 2d34 3638 -784.88 197,-468\n-0001a5e0: 2e35 3320 3139 372c 2d33 3833 2e36 3620 .53 197,-383.66 \n-0001a5f0: 3430 322e 3933 2c2d 3235 322e 3439 2034 402.93,-252.49 4\n-0001a600: 3733 2c2d 3230 342e 3631 2034 3935 2e38 73,-204.61 495.8\n-0001a610: 362c 2d31 3838 2e39 3920 3532 342e 3535 6,-188.99 524.55\n-0001a620: 2c2d 3137 362e 3036 2035 3436 2e30 312c ,-176.06 546.01,\n-0001a630: 2d31 3637 2e34 3922 2f3e 0a3c 706f 6c79 -167.49\"/>...<\n-0001a6b0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0001a6c0: 726f 6d61 6373 5f61 7070 6c69 6564 5f66 romacs_applied_f\n-0001a6d0: 6f72 6365 7326 2334 353b 2667 743b 6d6f orces->mo\n-0001a6e0: 6475 6c65 5f73 7263 5f70 726f 6772 616d dule_src_program\n-0001a6f0: 735f 6d64 7275 6e5f 7465 7374 7320 2d2d s_mdrun_tests --\n-0001a700: 3e0a 3c67 2069 643d 2265 6467 6531 3733 >..\n-0001a720: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n-0001a730: 635f 6772 6f6d 6163 735f 6170 706c 6965 c_gromacs_applie\n-0001a740: 645f 666f 7263 6573 2623 3435 3b26 6774 d_forces->\n-0001a750: 3b6d 6f64 756c 655f 7372 635f 7072 6f67 ;module_src_prog\n-0001a760: 7261 6d73 5f6d 6472 756e 5f74 6573 7473 rams_mdrun_tests\n-0001a770: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......mod\n-0001a8f0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0001a900: 6170 706c 6965 645f 666f 7263 6573 2623 applied_forces&#\n-0001a910: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001a920: 635f 6772 6f6d 6163 735f 676d 786c 6962 c_gromacs_gmxlib\n-0001a930: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ....\n+00017390: 0a3c 6720 6964 3d22 6564 6765 3134 3422 ..<\n+000173b0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+000173c0: 5f67 726f 6d61 6373 5f61 7070 6c69 6564 _gromacs_applied\n+000173d0: 5f66 6f72 6365 7326 2334 353b 2667 743b _forces->\n+000173e0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000173f0: 6373 5f6f 7074 696f 6e73 3c2f 7469 746c cs_options.\n+00017480: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....module_src_gr\n+00017570: 6f6d 6163 735f 6170 706c 6965 645f 666f omacs_applied_fo\n+00017580: 7263 6573 2623 3435 3b26 6774 3b6d 6f64 rces->mod\n+00017590: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+000175a0: 6d64 6c69 623c 2f74 6974 6c65 3e0a 3c70 mdlib......mod\n+00017820: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00017830: 6170 706c 6965 645f 666f 7263 6573 2623 applied_forces&#\n+00017840: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00017850: 635f 6772 6f6d 6163 735f 6669 6c65 696f c_gromacs_fileio\n+00017860: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ...<\n+00017990: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modu\n+00017c60: 6c65 5f73 7263 5f67 726f 6d61 6373 5f61 le_src_gromacs_a\n+00017c70: 7070 6c69 6564 5f66 6f72 6365 7326 2334 pplied_forces\n+00017c80: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00017c90: 5f67 726f 6d61 6373 5f64 6f6d 6465 633c _gromacs_domdec<\n+00017ca0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00017cb0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00017cc0: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n+00017cd0: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n+00017ce0: 2220 643d 224d 3136 3338 2e33 2c2d 3136 \" d=\"M1638.3,-16\n+00017cf0: 312e 3637 4331 3532 352e 3633 2c2d 3137 1.67C1525.63,-17\n+00017d00: 342e 3133 2031 3234 322e 3136 2c2d 3230 4.13 1242.16,-20\n+00017d10: 352e 3434 2031 3030 352c 2d32 3331 2e34 5.44 1005,-231.4\n+00017d20: 3820 3835 382e 392c 2d32 3437 2e35 3220 8 858.9,-247.52 \n+00017d30: 3638 352e 3639 2c2d 3236 362e 3433 2036 685.69,-266.43 6\n+00017d40: 3036 2e30 352c 2d32 3735 2e31 3122 2f3e 06.05,-275.11\"/>\n+00017d50: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .<polygon fill=\"\n+00017d60: 2332 3832 6663 6322 2073 7472 6f6b 653d #282fcc\" stroke=\n+00017d70: 2223 3238 3266 6363 2220 706f 696e 7473 \"#282fcc\" points\n+00017d80: 3d22 3630 352e 3436 2c2d 3237 312e 3636 =\"605.46,-271.66\n+00017d90: 2035 3935 2e39 2c2d 3237 362e 3232 2036 595.9,-276.22 6\n+00017da0: 3036 2e32 322c 2d32 3738 2e36 3120 3630 06.22,-278.61 60\n+00017db0: 352e 3436 2c2d 3237 312e 3636 222f 3e0a 5.46,-271.66\"/>.\n+00017dc0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+00017dd0: 5f73 7263 5f67 726f 6d61 6373 5f61 7070 _src_gromacs_app\n+00017de0: 6c69 6564 5f66 6f72 6365 7326 2334 353b lied_forces-\n+00017df0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00017e00: 726f 6d61 6373 5f6d 6473 7061 6e20 2d2d romacs_mdspan --\n+00017e10: 3e0a 3c67 2069 643d 2265 6467 6531 3534 >.<g id=\"edge154\n+00017e20: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n+00017e30: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n+00017e40: 635f 6772 6f6d 6163 735f 6170 706c 6965 c_gromacs_applie\n+00017e50: 645f 666f 7263 6573 2623 3435 3b26 6774 d_forces->\n+00017e60: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00017e70: 6163 735f 6d64 7370 616e 3c2f 7469 746c acs_mdspan</titl\n+00017e80: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00017e90: 6f6e 6522 2073 7472 6f6b 653d 2272 6564 one\" stroke=\"red\n+00017ea0: 2220 643d 224d 3136 3931 2e37 362c 2d31 \" d=\"M1691.76,-1\n+00017eb0: 3431 2e34 3843 3136 3937 2e36 362c 2d31 41.48C1697.66,-1\n+00017ec0: 3234 2e30 3720 3137 3130 2e38 362c 2d39 24.07 1710.86,-9\n+00017ed0: 332e 3239 2031 3733 342c 2d37 382e 3837 3.29 1734,-78.87\n+00017ee0: 2031 3737 342e 3133 2c2d 3533 2e38 3620 1774.13,-53.86 \n+00017ef0: 3230 3931 2e39 372c 2d33 372e 3633 2032 2091.97,-37.63 2\n+00017f00: 3231 322e 3137 2c2d 3332 2e33 3322 2f3e 212.17,-32.33\"/>\n+00017f10: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .<polygon fill=\"\n+00017f20: 7265 6422 2073 7472 6f6b 653d 2272 6564 red\" stroke=\"red\n+00017f30: 2220 706f 696e 7473 3d22 3232 3132 2e36 \" points=\"2212.6\n+00017f40: 362c 2d33 352e 3831 2032 3232 322e 352c 6,-35.81 2222.5,\n+00017f50: 2d33 312e 3838 2032 3231 322e 3336 2c2d -31.88 2212.36,-\n+00017f60: 3238 2e38 3220 3232 3132 2e36 362c 2d33 28.82 2212.66,-3\n+00017f70: 352e 3831 222f 3e0a 3c2f 673e 0a3c 212d 5.81\"/>.</g>.<!-\n+00017f80: 2d20 6d6f 6475 6c65 5f73 7263 5f67 726f - module_src_gro\n+00017f90: 6d61 6373 5f61 7070 6c69 6564 5f66 6f72 macs_applied_for\n+00017fa0: 6365 7326 2334 353b 2667 743b 6d6f 6475 ces->modu\n+00017fb0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f65 le_src_gromacs_e\n+00017fc0: 7761 6c64 202d 2d3e 0a3c 6720 6964 3d22 wald -->.<g id=\"\n+00017fd0: 6564 6765 3135 3522 2063 6c61 7373 3d22 edge155\" class=\"\n+00017fe0: 6564 6765 223e 0a3c 7469 746c 653e 6d6f edge\">.<title>mo\n+00017ff0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00018000: 5f61 7070 6c69 6564 5f66 6f72 6365 7326 _applied_forces&\n+00018010: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00018020: 7263 5f67 726f 6d61 6373 5f65 7761 6c64 rc_gromacs_ewald\n+00018030: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ..\n+00018120: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....module_\n+00018380: 7372 635f 6772 6f6d 6163 735f 6170 706c src_gromacs_appl\n+00018390: 6965 645f 666f 7263 6573 2623 3435 3b26 ied_forces-&\n+000183a0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+000183b0: 6f6d 6163 735f 676d 7870 7265 7072 6f63 omacs_gmxpreproc\n+000183c0: 6573 733c 2f74 6974 6c65 3e0a 3c70 6174 ess...\n+00018620: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_gr\n+000186a0: 6f6d 6163 735f 6170 706c 6965 645f 666f omacs_applied_fo\n+000186b0: 7263 6573 2623 3435 3b26 6774 3b6d 6f64 rces->mod\n+000186c0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+000186d0: 636f 6d70 6174 3c2f 7469 746c 653e 0a3c compat.<\n+000186e0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+000186f0: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n+00018700: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n+00018710: 6179 3d22 352c 3222 2064 3d22 4d31 3730 ay=\"5,2\" d=\"M170\n+00018720: 352e 3738 2c2d 3134 322e 3135 4331 3731 5.78,-142.15C171\n+00018730: 392e 342c 2d31 3332 2e39 3420 3137 3338 9.4,-132.94 1738\n+00018740: 2e33 342c 2d31 3230 2e31 3320 3137 3533 .34,-120.13 1753\n+00018750: 2e34 312c 2d31 3039 2e39 3322 2f3e 0a3c .41,-109.93\"/>.<\n+00018760: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n+00018770: 3832 6663 6322 2073 7472 6f6b 653d 2223 82fcc\" stroke=\"#\n+00018780: 3238 3266 6363 2220 706f 696e 7473 3d22 282fcc\" points=\"\n+00018790: 3137 3535 2e34 352c 2d31 3132 2e37 3820 1755.45,-112.78 \n+000187a0: 3137 3631 2e37 372c 2d31 3034 2e32 3820 1761.77,-104.28 \n+000187b0: 3137 3531 2e35 322c 2d31 3036 2e39 3920 1751.52,-106.99 \n+000187c0: 3137 3535 2e34 352c 2d31 3132 2e37 3822 1755.45,-112.78\"\n+000187d0: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />....m\n+00018850: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00018860: 735f 6170 706c 6965 645f 666f 7263 6573 s_applied_forces\n+00018870: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+00018880: 7372 635f 6772 6f6d 6163 735f 636f 6d6d src_gromacs_comm\n+00018890: 616e 646c 696e 653c 2f74 6974 6c65 3e0a andline.\n+000188a0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .....module\n+00018a60: 5f73 7263 5f67 726f 6d61 6373 5f61 7070 _src_gromacs_app\n+00018a70: 6c69 6564 5f66 6f72 6365 7326 2334 353b lied_forces-\n+00018a80: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00018a90: 726f 6d61 6373 5f6d 6472 756e 7574 696c romacs_mdrunutil\n+00018aa0: 6974 793c 2f74 6974 6c65 3e0a 3c70 6174 ity.....\n+00018c70: 3c67 2069 643d 2265 6467 6531 3536 2220 .module_src_\n+00018ca0: 6772 6f6d 6163 735f 6e62 6e78 6d26 2334 gromacs_nbnxm\n+00018cb0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00018cc0: 5f67 726f 6d61 6373 5f67 6d78 6c69 623c _gromacs_gmxlib<\n+00018cd0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>......mod\n+00018e20: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00018e30: 6e62 6e78 6d26 2334 353b 2667 743b 6d6f nbnxm->mo\n+00018e40: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00018e50: 5f68 6172 6477 6172 653c 2f74 6974 6c65 _hardware</title\n+00018e60: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+00018e70: 6e65 2220 7374 726f 6b65 3d22 7265 6422 ne\" stroke=\"red\"\n+00018e80: 2064 3d22 4d37 3231 2e38 372c 2d39 3835 d=\"M721.87,-985\n+00018e90: 2e37 3243 3733 302e 3434 2c2d 3130 3030 .72C730.44,-1000\n+00018ea0: 2e35 3920 3734 322e 3137 2c2d 3130 3236 .59 742.17,-1026\n+00018eb0: 2e34 3720 3733 362c 2d31 3034 382e 3739 .47 736,-1048.79\n+00018ec0: 2037 3333 2e33 312c 2d31 3035 382e 3534 733.31,-1058.54\n+00018ed0: 2037 3238 2e30 372c 2d31 3036 382e 3239 728.07,-1068.29\n+00018ee0: 2037 3232 2e37 382c 2d31 3037 362e 3437 722.78,-1076.47\n+00018ef0: 222f 3e0a 3c70 6f6c 7967 6f6e 2066 696c \"/>.<polygon fil\n+00018f00: 6c3d 2272 6564 2220 7374 726f 6b65 3d22 l=\"red\" stroke=\"\n+00018f10: 7265 6422 2070 6f69 6e74 733d 2237 3139 red\" points=\"719\n+00018f20: 2e37 332c 2d31 3037 342e 3733 2037 3136 .73,-1074.73 716\n+00018f30: 2e39 322c 2d31 3038 342e 3935 2037 3235 .92,-1084.95 725\n+00018f40: 2e34 392c 2d31 3037 382e 3731 2037 3139 .49,-1078.71 719\n+00018f50: 2e37 332c 2d31 3037 342e 3733 222f 3e0a .73,-1074.73\"/>.\n+00018f60: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+00018f70: 5f73 7263 5f67 726f 6d61 6373 5f6e 626e _src_gromacs_nbn\n+00018f80: 786d 2623 3435 3b26 6774 3b6d 6f64 756c xm->modul\n+00018f90: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n+00018fa0: 6c69 6220 2d2d 3e0a 3c67 2069 643d 2265 lib -->.<g id=\"e\n+00018fb0: 6467 6531 3632 2220 636c 6173 733d 2265 dge162\" class=\"e\n+00018fc0: 6467 6522 3e0a 3c74 6974 6c65 3e6d 6f64 dge\">.<title>mod\n+00018fd0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00018fe0: 6e62 6e78 6d26 2334 353b 2667 743b 6d6f nbnxm->mo\n+00018ff0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00019000: 5f6d 646c 6962 3c2f 7469 746c 653e 0a3c _mdlib.<\n+00019010: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+00019020: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+00019030: 2220 643d 224d 3734 352e 3434 2c2d 3936 \" d=\"M745.44,-96\n+00019040: 382e 3832 4338 3138 2e34 2c2d 3936 322e 8.82C818.4,-962.\n+00019050: 3735 2039 3936 2e34 312c 2d39 3436 2e36 75 996.41,-946.6\n+00019060: 2031 3035 322c 2d39 3233 2e30 3520 3130 1052,-923.05 10\n+00019070: 3837 2e31 382c 2d39 3038 2e31 3520 3131 87.18,-908.15 11\n+00019080: 3732 2e32 342c 2d38 3335 2e30 3720 3132 72.24,-835.07 12\n+00019090: 3134 2e32 322c 2d38 3031 2e36 3322 2f3e 14.22,-801.63\"/>\n+000190a0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ....<\n+00019160: 6720 6964 3d22 6564 6765 3135 3722 2063 g id=\"edge157\" c\n+00019170: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n+00019190: 726f 6d61 6373 5f6e 626e 786d 2623 3435 romacs_nbnxm-\n+000191a0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+000191b0: 6772 6f6d 6163 735f 6d64 7479 7065 733c gromacs_mdtypes<\n+000191c0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>......module_src_grom\n+00019310: 6163 735f 6e62 6e78 6d26 2334 353b 2667 acs_nbnxm-&g\n+00019320: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00019330: 6d61 6373 5f64 6f6d 6465 633c 2f74 6974 macs_domdec.\n+00019430: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ..<\n+000194a0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...modu\n+00019510: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6e le_src_gromacs_n\n+00019520: 626e 786d 2623 3435 3b26 6774 3b6d 6f64 bnxm->mod\n+00019530: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00019540: 6577 616c 643c 2f74 6974 6c65 3e0a 3c70 ewald......mo\n+00019720: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00019730: 5f6e 626e 786d 2623 3435 3b26 6774 3b6d _nbnxm->m\n+00019740: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00019750: 735f 6c69 7374 6564 5f66 6f72 6365 733c s_listed_forces<\n+00019760: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00019770: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00019780: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n+00019790: 652d 6461 7368 6172 7261 793d 2235 2c32 e-dasharray=\"5,2\n+000197a0: 2220 643d 224d 3734 362e 3131 2c2d 3936 \" d=\"M746.11,-96\n+000197b0: 392e 3939 4338 3337 2e31 392c 2d39 3635 9.99C837.19,-965\n+000197c0: 2e37 3820 3131 3033 2e38 362c 2d39 3532 .78 1103.86,-952\n+000197d0: 2e31 3420 3133 3234 2c2d 3932 332e 3035 .14 1324,-923.05\n+000197e0: 2031 3632 352e 3636 2c2d 3838 332e 3138 1625.66,-883.18\n+000197f0: 2031 3731 382e 3535 2c2d 3932 302e 3031 1718.55,-920.01\n+00019800: 2031 3939 372c 2d37 3937 2e33 3120 3230 1997,-797.31 20\n+00019810: 3832 2e30 322c 2d37 3539 2e38 3520 3231 82.02,-759.85 21\n+00019820: 3232 2e35 332c 2d37 3534 2e37 3120 3231 22.53,-754.71 21\n+00019830: 3634 2c2d 3637 312e 3537 2032 3139 342e 64,-671.57 2194.\n+00019840: 3638 2c2d 3631 302e 3037 2032 3138 312e 68,-610.07 2181.\n+00019850: 3339 2c2d 3537 332e 3037 2032 3133 392c 39,-573.07 2139,\n+00019860: 2d35 3138 2e39 3620 3231 3138 2e36 332c -518.96 2118.63,\n+00019870: 2d34 3932 2e39 3620 3230 3938 2e30 352c -492.96 2098.05,\n+00019880: 2d35 3035 2e35 3920 3230 3734 2c2d 3438 -505.59 2074,-48\n+00019890: 322e 3936 2032 3032 352e 3836 2c2d 3433 2.96 2025.86,-43\n+000198a0: 372e 3637 2032 3031 392c 2d34 3130 2e38 7.67 2019,-410.8\n+000198b0: 3820 3230 3139 2c2d 3334 342e 3739 2032 8 2019,-344.79 2\n+000198c0: 3031 392c 2d33 3434 2e37 3920 3230 3139 019,-344.79 2019\n+000198d0: 2c2d 3334 342e 3739 2032 3031 392c 2d32 ,-344.79 2019,-2\n+000198e0: 3739 2e39 3220 3230 3139 2c2d 3234 342e 79.92 2019,-244.\n+000198f0: 3731 2032 3031 392c 2d32 3033 2e38 3620 71 2019,-203.86 \n+00019900: 3230 3231 2e33 362c 2d31 3739 2e30 3322 2021.36,-179.03\"\n+00019910: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n+00019920: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n+00019930: 653d 2223 3238 3266 6363 2220 706f 696e e=\"#282fcc\" poin\n+00019940: 7473 3d22 3230 3234 2e38 372c 2d31 3739 ts=\"2024.87,-179\n+00019950: 2e31 3820 3230 3232 2e36 322c 2d31 3638 .18 2022.62,-168\n+00019960: 2e38 3220 3230 3137 2e39 322c 2d31 3738 .82 2017.92,-178\n+00019970: 2e33 3220 3230 3234 2e38 372c 2d31 3739 .32 2024.87,-179\n+00019980: 2e31 3822 2f3e 0a3c 2f67 3e0a 3c21 2d2d .18\"/>.</g>.<!--\n+00019990: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+000199a0: 6163 735f 6e62 6e78 6d26 2334 353b 2667 acs_nbnxm-&g\n+000199b0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+000199c0: 6d61 6373 5f67 7075 5f75 7469 6c73 202d macs_gpu_utils -\n+000199d0: 2d3e 0a3c 6720 6964 3d22 6564 6765 3135 ->.<g id=\"edge15\n+000199e0: 3822 2063 6c61 7373 3d22 6564 6765 223e 8\" class=\"edge\">\n+000199f0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+00019a00: 7263 5f67 726f 6d61 6373 5f6e 626e 786d rc_gromacs_nbnxm\n+00019a10: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+00019a20: 7372 635f 6772 6f6d 6163 735f 6770 755f src_gromacs_gpu_\n+00019a30: 7574 696c 733c 2f74 6974 6c65 3e0a 3c70 utils.\n+00019aa0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ...\n+00019b40: 0a3c 6720 6964 3d22 6e6f 6465 3330 2220 ..module_src_\n+00019b70: 6772 6f6d 6163 735f 7472 616a 6563 746f gromacs_trajecto\n+00019b80: 7279 616e 616c 7973 6973 3c2f 7469 746c ryanalysis...traje\n+00019cc0: 6374 6f72 7961 6e61 6c79 7369 733c 2f74 ctoryanalysis...<\n+00019ce0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module\n+00019d60: 5f73 7263 5f67 726f 6d61 6373 5f74 7261 _src_gromacs_tra\n+00019d70: 6a65 6374 6f72 7961 6e61 6c79 7369 7326 jectoryanalysis&\n+00019d80: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00019d90: 7263 5f67 726f 6d61 6373 5f66 696c 6569 rc_gromacs_filei\n+00019da0: 6f3c 2f74 6974 6c65 3e0a 3c70 6174 6820 o..\n+00019eb0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....modu\n+00019f30: 6c65 5f73 7263 5f67 726f 6d61 6373 5f74 le_src_gromacs_t\n+00019f40: 7261 6a65 6374 6f72 7961 6e61 6c79 7369 rajectoryanalysi\n+00019f50: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+00019f60: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+00019f70: 616e 613c 2f74 6974 6c65 3e0a 3c70 6174 ana...<\n+0001a100: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_grom\n+0001a160: 6163 735f 616e 616c 7973 6973 6461 7461 acs_analysisdata\n+0001a170: 3c2f 7469 746c 653e 0a3c 6720 6964 3d22 ...analysisdat\n+0001a2a0: 613c 2f74 6578 743e 0a3c 2f61 3e0a 3c2f a.....<\n+0001a310: 6720 6964 3d22 6564 6765 3136 3522 2063 g id=\"edge165\" c\n+0001a320: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n+0001a340: 726f 6d61 6373 5f74 7261 6a65 6374 6f72 romacs_trajector\n+0001a350: 7961 6e61 6c79 7369 7326 2334 353b 2667 yanalysis-&g\n+0001a360: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001a370: 6d61 6373 5f61 6e61 6c79 7369 7364 6174 macs_analysisdat\n+0001a380: 613c 2f74 6974 6c65 3e0a 3c70 6174 6820 a...\n+0001a480: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_gro\n+0001a710: 6d61 6373 5f63 6f6f 7264 696e 6174 6569 macs_coordinatei\n+0001a720: 6f3c 2f74 6974 6c65 3e0a 3c67 2069 643d o...coordinate\n+0001a850: 696f 3c2f 7465 7874 3e0a 3c2f 613e 0a3c io..<\n+0001a860: 2f67 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f /g>...\n+0001a8c0: 3c67 2069 643d 2265 6467 6531 3637 2220 .module_src_\n+0001a8f0: 6772 6f6d 6163 735f 7472 616a 6563 746f gromacs_trajecto\n+0001a900: 7279 616e 616c 7973 6973 2623 3435 3b26 ryanalysis-&\n+0001a910: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+0001a920: 6f6d 6163 735f 636f 6f72 6469 6e61 7465 omacs_coordinate\n+0001a930: 696f 3c2f 7469 746c 653e 0a3c 7061 7468 io..\n+0001a9b0: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....\n+0001aaa0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001aab0: 6373 5f74 7261 6a65 6374 6f72 7961 6e61 cs_trajectoryana\n+0001aac0: 6c79 7369 7326 2334 353b 2667 743b 6d6f lysis->mo\n 0001aad0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0001aae0: 5f61 7070 6c69 6564 5f66 6f72 6365 7326 _applied_forces&\n-0001aaf0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0001ab00: 7263 5f67 726f 6d61 6373 5f68 6172 6477 rc_gromacs_hardw\n-0001ab10: 6172 6520 2d2d 3e0a 3c67 2069 643d 2265 are -->.<g id=\"e\n-0001ab20: 6467 6531 3735 2220 636c 6173 733d 2265 dge175\" class=\"e\n-0001ab30: 6467 6522 3e0a 3c74 6974 6c65 3e6d 6f64 dge\">.<title>mod\n-0001ab40: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0001ab50: 6170 706c 6965 645f 666f 7263 6573 2623 applied_forces&#\n-0001ab60: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001ab70: 635f 6772 6f6d 6163 735f 6861 7264 7761 c_gromacs_hardwa\n-0001ab80: 7265 3c2f 7469 746c 653e 0a3c 7061 7468 re......module_src_grom\n-0001ad90: 6163 735f 6170 706c 6965 645f 666f 7263 acs_applied_forc\n-0001ada0: 6573 2623 3435 3b26 6774 3b6d 6f64 756c es->modul\n-0001adb0: 655f 7372 635f 6772 6f6d 6163 735f 6f70 e_src_gromacs_op\n-0001adc0: 7469 6f6e 733c 2f74 6974 6c65 3e0a 3c70 tions......modul\n-0001af90: 655f 7372 635f 6772 6f6d 6163 735f 6170 e_src_gromacs_ap\n-0001afa0: 706c 6965 645f 666f 7263 6573 2623 3435 plied_forces-\n-0001afb0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0001afc0: 6772 6f6d 6163 735f 6d64 6c69 623c 2f74 gromacs_mdlib</t\n-0001afd0: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-0001afe0: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-0001aff0: 2332 3832 6663 6322 2073 7472 6f6b 652d #282fcc\" stroke-\n-0001b000: 6461 7368 6172 7261 793d 2235 2c32 2220 dasharray=\"5,2\" \n-0001b010: 643d 224d 3231 3930 2e30 322c 2d31 3638 d=\"M2190.02,-168\n-0001b020: 2e35 3643 3232 3236 2e32 322c 2d32 3134 .56C2226.22,-214\n-0001b030: 2e38 3720 3233 3434 2e31 332c 2d33 3830 .87 2344.13,-380\n-0001b040: 2e34 3620 3232 3637 2c2d 3438 322e 3936 .46 2267,-482.96\n-0001b050: 2032 3135 322e 3639 2c2d 3633 342e 3836 2152.69,-634.86\n-0001b060: 2032 3039 382e 3839 2c2d 3636 372e 3338 2098.89,-667.38\n-0001b070: 2031 3932 312c 2d37 3334 2e34 3420 3138 1921,-734.44 18\n-0001b080: 3333 2e32 332c 2d37 3637 2e35 3320 3135 33.23,-767.53 15\n-0001b090: 3436 2e35 322c 2d37 3738 2e38 3320 3134 46.52,-778.83 14\n-0001b0a0: 3432 2e33 2c2d 3738 312e 3922 2f3e 0a3c 42.3,-781.9\"/>.<\n-0001b0b0: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n-0001b0c0: 3832 6663 6322 2073 7472 6f6b 653d 2223 82fcc\" stroke=\"#\n-0001b0d0: 3238 3266 6363 2220 706f 696e 7473 3d22 282fcc\" points=\"\n-0001b0e0: 3134 3432 2e31 322c 2d37 3738 2e34 2031 1442.12,-778.4 1\n-0001b0f0: 3433 322e 3233 2c2d 3738 322e 3139 2031 432.23,-782.19 1\n-0001b100: 3434 322e 3332 2c2d 3738 352e 3420 3134 442.32,-785.4 14\n-0001b110: 3432 2e31 322c 2d37 3738 2e34 222f 3e0a 42.12,-778.4\"/>.\n-0001b120: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n-0001b130: 5f73 7263 5f67 726f 6d61 6373 5f61 7070 _src_gromacs_app\n-0001b140: 6c69 6564 5f66 6f72 6365 7326 2334 353b lied_forces-\n-0001b150: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0001b160: 726f 6d61 6373 5f66 696c 6569 6f20 2d2d romacs_fileio --\n-0001b170: 3e0a 3c67 2069 643d 2265 6467 6531 3637 >.<g id=\"edge167\n-0001b180: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n-0001b190: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n-0001b1a0: 635f 6772 6f6d 6163 735f 6170 706c 6965 c_gromacs_applie\n-0001b1b0: 645f 666f 7263 6573 2623 3435 3b26 6774 d_forces->\n-0001b1c0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-0001b1d0: 6163 735f 6669 6c65 696f 3c2f 7469 746c acs_fileio</titl\n-0001b1e0: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n-0001b1f0: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n-0001b200: 6266 6266 2220 643d 224d 3231 3639 2e38 bfbf\" d=\"M2169.8\n-0001b210: 342c 2d31 3638 2e36 3243 3231 3632 2e31 4,-168.62C2162.1\n-0001b220: 352c 2d31 3738 2e32 3320 3231 3531 2e35 5,-178.23 2151.5\n-0001b230: 312c 2d31 3931 2e39 3720 3231 3433 2c2d 1,-191.97 2143,-\n-0001b240: 3230 342e 3631 2032 3039 392e 3032 2c2d 204.61 2099.02,-\n-0001b250: 3236 392e 3933 2032 3131 302e 3338 2c2d 269.93 2110.38,-\n-0001b260: 3330 332e 3239 2032 3035 332c 2d33 3537 303.29 2053,-357\n-0001b270: 2e32 3220 3139 3633 2e32 342c 2d34 3431 .22 1963.24,-441\n-0001b280: 2e35 3820 3139 3234 2e37 352c 2d34 3530 .58 1924.75,-450\n-0001b290: 2e32 3220 3138 3036 2c2d 3438 322e 3936 .22 1806,-482.96\n-0001b2a0: 2031 3737 322e 3734 2c2d 3439 322e 3133 1772.74,-492.13\n-0001b2b0: 2031 3236 342e 3139 2c2d 3532 312e 3331 1264.19,-521.31\n-0001b2c0: 2031 3132 312e 382c 2d35 3239 2e33 3322 1121.8,-529.33\"\n-0001b2d0: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n-0001b2e0: 3d22 2362 6662 6662 6622 2073 7472 6f6b =\"#bfbfbf\" strok\n-0001b2f0: 653d 2223 6266 6266 6266 2220 706f 696e e=\"#bfbfbf\" poin\n-0001b300: 7473 3d22 3131 3231 2e36 2c2d 3532 352e ts=\"1121.6,-525.\n-0001b310: 3834 2031 3131 312e 3831 2c2d 3532 392e 84 1111.81,-529.\n-0001b320: 3920 3131 3231 2e39 392c 2d35 3332 2e38 9 1121.99,-532.8\n-0001b330: 3320 3131 3231 2e36 2c2d 3532 352e 3834 3 1121.6,-525.84\n-0001b340: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n-0001b350: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0001b360: 5f61 7070 6c69 6564 5f66 6f72 6365 7326 _applied_forces&\n-0001b370: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0001b380: 7263 5f67 726f 6d61 6373 5f6d 6474 7970 rc_gromacs_mdtyp\n-0001b390: 6573 202d 2d3e 0a3c 6720 6964 3d22 6564 es -->.<g id=\"ed\n-0001b3a0: 6765 3136 3822 2063 6c61 7373 3d22 6564 ge168\" class=\"ed\n-0001b3b0: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n-0001b3c0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f61 le_src_gromacs_a\n-0001b3d0: 7070 6c69 6564 5f66 6f72 6365 7326 2334 pplied_forces\n-0001b3e0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0001b3f0: 5f67 726f 6d61 6373 5f6d 6474 7970 6573 _gromacs_mdtypes\n-0001b400: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......mod\n-0001b610: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0001b620: 6170 706c 6965 645f 666f 7263 6573 2623 applied_forces&#\n-0001b630: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001b640: 635f 6772 6f6d 6163 735f 646f 6d64 6563 c_gromacs_domdec\n-0001b650: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ...\n-0001b750: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_gr\n-0001b7d0: 6f6d 6163 735f 6170 706c 6965 645f 666f omacs_applied_fo\n-0001b7e0: 7263 6573 2623 3435 3b26 6774 3b6d 6f64 rces->mod\n-0001b7f0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0001b800: 6d64 7370 616e 3c2f 7469 746c 653e 0a3c mdspan.<\n-0001b810: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-0001b820: 2073 7472 6f6b 653d 2272 6564 2220 643d stroke=\"red\" d=\n-0001b830: 224d 3231 3338 2e30 362c 2d31 3436 2e31 \"M2138.06,-146.1\n-0001b840: 3143 3231 3238 2e35 332c 2d31 3434 2e34 1C2128.53,-144.4\n-0001b850: 3820 3231 3138 2e34 342c 2d31 3432 2e39 8 2118.44,-142.9\n-0001b860: 3120 3231 3039 2c2d 3134 312e 3734 2031 1 2109,-141.74 1\n-0001b870: 3533 312e 3237 2c2d 3730 2e31 3220 3832 531.27,-70.12 82\n-0001b880: 332e 3534 2c2d 3339 2e32 3820 3633 382e 3.54,-39.28 638.\n-0001b890: 3832 2c2d 3332 2e31 3222 2f3e 0a3c 706f 82,-32.12\"/>.\n-0001b900: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....modu\n-0001bb30: 6c65 5f73 7263 5f67 726f 6d61 6373 5f61 le_src_gromacs_a\n-0001bb40: 7070 6c69 6564 5f66 6f72 6365 7326 2334 pplied_forces\n-0001bb50: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0001bb60: 5f67 726f 6d61 6373 5f72 616e 646f 6d3c _gromacs_random<\n-0001bb70: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n-0001bb80: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n-0001bb90: 3d22 626c 6163 6b22 2073 7472 6f6b 652d =\"black\" stroke-\n-0001bba0: 6461 7368 6172 7261 793d 2235 2c32 2220 dasharray=\"5,2\" \n-0001bbb0: 643d 224d 3231 3338 2e34 352c 2d31 3436 d=\"M2138.45,-146\n-0001bbc0: 2e30 3343 3231 3238 2e38 312c 2d31 3434 .03C2128.81,-144\n-0001bbd0: 2e33 3820 3231 3138 2e35 372c 2d31 3432 .38 2118.57,-142\n-0001bbe0: 2e38 3220 3231 3039 2c2d 3134 312e 3734 .82 2109,-141.74\n-0001bbf0: 2031 3737 312e 3832 2c2d 3130 332e 3534 1771.82,-103.54\n-0001bc00: 2031 3336 322e 3039 2c2d 3935 2e34 3120 1362.09,-95.41 \n-0001bc10: 3132 3237 2e38 392c 2d39 332e 3733 222f 1227.89,-93.73\"/\n-0001bc20: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n-0001bc30: 2262 6c61 636b 2220 7374 726f 6b65 3d22 \"black\" stroke=\"\n-0001bc40: 626c 6163 6b22 2070 6f69 6e74 733d 2231 black\" points=\"1\n-0001bc50: 3232 372e 3634 2c2d 3930 2e32 3320 3132 227.64,-90.23 12\n-0001bc60: 3137 2e36 2c2d 3933 2e36 3120 3132 3237 17.6,-93.61 1227\n-0001bc70: 2e35 362c 2d39 372e 3233 2031 3232 372e .56,-97.23 1227.\n-0001bc80: 3634 2c2d 3930 2e32 3322 2f3e 0a3c 2f67 64,-90.23\"/>.</g\n-0001bc90: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n-0001bca0: 635f 6772 6f6d 6163 735f 6170 706c 6965 c_gromacs_applie\n-0001bcb0: 645f 666f 7263 6573 2623 3435 3b26 6774 d_forces->\n-0001bcc0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-0001bcd0: 6163 735f 676d 7870 7265 7072 6f63 6573 acs_gmxpreproces\n-0001bce0: 7320 2d2d 3e0a 3c67 2069 643d 2265 6467 s -->.<g id=\"edg\n-0001bcf0: 6531 3732 2220 636c 6173 733d 2265 6467 e172\" class=\"edg\n-0001bd00: 6522 3e0a 3c74 6974 6c65 3e6d 6f64 756c e\">.<title>modul\n-0001bd10: 655f 7372 635f 6772 6f6d 6163 735f 6170 e_src_gromacs_ap\n-0001bd20: 706c 6965 645f 666f 7263 6573 2623 3435 plied_forces-\n-0001bd30: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0001bd40: 6772 6f6d 6163 735f 676d 7870 7265 7072 gromacs_gmxprepr\n-0001bd50: 6f63 6573 733c 2f74 6974 6c65 3e0a 3c70 ocess..\n-0001bfc0: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....m\n-0001c0b0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0001c0c0: 735f 6170 706c 6965 645f 666f 7263 6573 s_applied_forces\n-0001c0d0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-0001c0e0: 7372 635f 6772 6f6d 6163 735f 636f 6d70 src_gromacs_comp\n-0001c0f0: 6174 3c2f 7469 746c 653e 0a3c 7061 7468 at....<\n-0001c250: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0001c260: 726f 6d61 6373 5f61 7070 6c69 6564 5f66 romacs_applied_f\n-0001c270: 6f72 6365 7326 2334 353b 2667 743b 6d6f orces->mo\n-0001c280: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0001c290: 5f63 6f6d 6d61 6e64 6c69 6e65 202d 2d3e _commandline -->\n-0001c2a0: 0a3c 6720 6964 3d22 6564 6765 3136 3622 ..<\n-0001c2c0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-0001c2d0: 5f67 726f 6d61 6373 5f61 7070 6c69 6564 _gromacs_applied\n-0001c2e0: 5f66 6f72 6365 7326 2334 353b 2667 743b _forces->\n-0001c2f0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0001c300: 6373 5f63 6f6d 6d61 6e64 6c69 6e65 3c2f cs_commandline.\n-0001c3c0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .........\n+0001ad00: 3c67 2069 643d 2265 6467 6531 3639 2220 .module_src_\n+0001ad30: 6772 6f6d 6163 735f 7472 616a 6563 746f gromacs_trajecto\n+0001ad40: 7279 616e 616c 7973 6973 2623 3435 3b26 ryanalysis-&\n+0001ad50: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+0001ad60: 6f6d 6163 735f 7374 6174 6973 7469 6373 omacs_statistics\n+0001ad70: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......mod\n+0001aef0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001af00: 7472 616a 6563 746f 7279 616e 616c 7973 trajectoryanalys\n+0001af10: 6973 2623 3435 3b26 6774 3b6d 6f64 756c is->modul\n+0001af20: 655f 7372 635f 6772 6f6d 6163 735f 636f e_src_gromacs_co\n+0001af30: 6d6d 616e 646c 696e 653c 2f74 6974 6c65 mmandline</title\n+0001af40: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+0001af50: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n+0001af60: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n+0001af70: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n+0001af80: 3137 3639 2e36 372c 2d36 3530 2e33 3343 1769.67,-650.33C\n+0001af90: 3136 3738 2e35 322c 2d36 3338 2e37 2031 1678.52,-638.7 1\n+0001afa0: 3439 332e 3636 2c2d 3631 352e 3131 2031 493.66,-615.11 1\n+0001afb0: 3430 312e 3233 2c2d 3630 332e 3331 222f 401.23,-603.31\"/\n+0001afc0: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n+0001afd0: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n+0001afe0: 3d22 2332 3832 6663 6322 2070 6f69 6e74 =\"#282fcc\" point\n+0001aff0: 733d 2231 3430 312e 3539 2c2d 3539 392e s=\"1401.59,-599.\n+0001b000: 3833 2031 3339 312e 3233 2c2d 3630 322e 83 1391.23,-602.\n+0001b010: 3034 2031 3430 302e 3731 2c2d 3630 362e 04 1400.71,-606.\n+0001b020: 3738 2031 3430 312e 3539 2c2d 3539 392e 78 1401.59,-599.\n+0001b030: 3833 222f 3e0a 3c2f 673e 0a3c 212d 2d20 83\"/>.</g>.<!-- \n+0001b040: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001b050: 6373 5f65 6e65 7267 7961 6e61 6c79 7369 cs_energyanalysi\n+0001b060: 7320 2d2d 3e0a 3c67 2069 643d 226e 6f64 s -->.<g id=\"nod\n+0001b070: 6533 3122 2063 6c61 7373 3d22 6e6f 6465 e31\" class=\"node\n+0001b080: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n+0001b090: 5f73 7263 5f67 726f 6d61 6373 5f65 6e65 _src_gromacs_ene\n+0001b0a0: 7267 7961 6e61 6c79 7369 733c 2f74 6974 rgyanalysis</tit\n+0001b0b0: 6c65 3e0a 3c67 2069 643d 2261 5f6e 6f64 le>.<g id=\"a_nod\n+0001b0c0: 6533 3122 3e3c 6120 786c 696e 6b3a 6872 e31\"><a xlink:hr\n+0001b0d0: 6566 3d22 6772 6f75 705f 5f6d 6f64 756c ef=\"group__modul\n+0001b0e0: 655f 5f65 6e65 7267 7961 6e61 6c79 7369 e__energyanalysi\n+0001b0f0: 732e 7868 746d 6c22 2074 6172 6765 743d s.xhtml\" target=\n+0001b100: 225f 746f 7022 2078 6c69 6e6b 3a74 6974 \"_top\" xlink:tit\n+0001b110: 6c65 3d22 656e 6572 6779 616e 616c 7973 le=\"energyanalys\n+0001b120: 6973 223e 0a3c 656c 6c69 7073 6520 6669 is\">.<ellipse fi\n+0001b130: 6c6c 3d22 2366 6663 6363 6322 2073 7472 ll=\"#ffcccc\" str\n+0001b140: 6f6b 653d 2262 6c61 636b 2220 6378 3d22 oke=\"black\" cx=\"\n+0001b150: 3135 3633 2220 6379 3d22 2d36 3538 2e31 1563\" cy=\"-658.1\n+0001b160: 3422 2072 783d 2235 362e 3634 2220 7279 4\" rx=\"56.64\" ry\n+0001b170: 3d22 3133 2e33 3722 2f3e 0a3c 7465 7874 =\"13.37\"/>.<text\n+0001b180: 2074 6578 742d 616e 6368 6f72 3d22 6d69 text-anchor=\"mi\n+0001b190: 6464 6c65 2220 783d 2231 3536 3322 2079 ddle\" x=\"1563\" y\n+0001b1a0: 3d22 2d36 3535 2e36 3422 2066 6f6e 742d =\"-655.64\" font-\n+0001b1b0: 6661 6d69 6c79 3d22 4672 6565 5361 6e73 family=\"FreeSans\n+0001b1c0: 2220 666f 6e74 2d73 697a 653d 2231 302e \" font-size=\"10.\n+0001b1d0: 3030 223e 656e 6572 6779 616e 616c 7973 00\">energyanalys\n+0001b1e0: 6973 3c2f 7465 7874 3e0a 3c2f 613e 0a3c is</text>.</a>.<\n+0001b1f0: 2f67 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f /g>.</g>.<!-- mo\n+0001b200: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0001b210: 5f65 6e65 7267 7961 6e61 6c79 7369 7326 _energyanalysis&\n+0001b220: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+0001b230: 7263 5f67 726f 6d61 6373 5f66 696c 6569 rc_gromacs_filei\n+0001b240: 6f20 2d2d 3e0a 3c67 2069 643d 2265 6467 o -->.<g id=\"edg\n+0001b250: 6531 3733 2220 636c 6173 733d 2265 6467 e173\" class=\"edg\n+0001b260: 6522 3e0a 3c74 6974 6c65 3e6d 6f64 756c e\">.<title>modul\n+0001b270: 655f 7372 635f 6772 6f6d 6163 735f 656e e_src_gromacs_en\n+0001b280: 6572 6779 616e 616c 7973 6973 2623 3435 ergyanalysis-\n+0001b290: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+0001b2a0: 6772 6f6d 6163 735f 6669 6c65 696f 3c2f gromacs_fileio</\n+0001b2b0: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+0001b2c0: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+0001b2d0: 2223 6266 6266 6266 2220 643d 224d 3135 \"#bfbfbf\" d=\"M15\n+0001b2e0: 3237 2e32 392c 2d36 3437 2e35 3243 3135 27.29,-647.52C15\n+0001b2f0: 3037 2e35 342c 2d36 3430 2e32 3420 3134 07.54,-640.24 14\n+0001b300: 3834 2e35 342c 2d36 3238 2e30 3920 3134 84.54,-628.09 14\n+0001b310: 3732 2c2d 3630 382e 3720 3134 3632 2c2d 72,-608.7 1462,-\n+0001b320: 3539 332e 3233 2031 3436 312e 3437 2c2d 593.23 1461.47,-\n+0001b330: 3537 322e 3035 2031 3436 332e 3033 2c2d 572.05 1463.03,-\n+0001b340: 3535 362e 3039 222f 3e0a 3c70 6f6c 7967 556.09\"/>.<polyg\n+0001b350: 6f6e 2066 696c 6c3d 2223 6266 6266 6266 on fill=\"#bfbfbf\n+0001b360: 2220 7374 726f 6b65 3d22 2362 6662 6662 \" stroke=\"#bfbfb\n+0001b370: 6622 2070 6f69 6e74 733d 2231 3436 362e f\" points=\"1466.\n+0001b380: 3532 2c2d 3535 362e 3338 2031 3436 342e 52,-556.38 1464.\n+0001b390: 3335 2c2d 3534 362e 3031 2031 3435 392e 35,-546.01 1459.\n+0001b3a0: 3538 2c2d 3535 352e 3437 2031 3436 362e 58,-555.47 1466.\n+0001b3b0: 3532 2c2d 3535 362e 3338 222f 3e0a 3c2f 52,-556.38\"/>.</\n+0001b3c0: 673e 0a3c 212d 2d20 6d6f 6475 6c65 5f73 g>.<!-- module_s\n+0001b3d0: 7263 5f67 726f 6d61 6373 5f65 6e65 7267 rc_gromacs_energ\n+0001b3e0: 7961 6e61 6c79 7369 7326 2334 353b 2667 yanalysis-&g\n+0001b3f0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001b400: 6d61 6373 5f67 6d78 616e 6120 2d2d 3e0a macs_gmxana -->.\n+0001b410: 3c67 2069 643d 2265 6467 6531 3735 2220 <g id=\"edge175\" \n+0001b420: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n+0001b430: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+0001b440: 6772 6f6d 6163 735f 656e 6572 6779 616e gromacs_energyan\n+0001b450: 616c 7973 6973 2623 3435 3b26 6774 3b6d alysis->m\n+0001b460: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001b470: 735f 676d 7861 6e61 3c2f 7469 746c 653e s_gmxana\n+0001b480: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ..\n+0001b560: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....module_src_gr\n+0001b660: 6f6d 6163 735f 656e 6572 6779 616e 616c omacs_energyanal\n+0001b670: 7973 6973 2623 3435 3b26 6774 3b6d 6f64 ysis->mod\n+0001b680: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001b690: 7374 6174 6973 7469 6373 3c2f 7469 746c statistics..\n+0001b750: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....\n+0001b840: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001b850: 6373 5f65 6e65 7267 7961 6e61 6c79 7369 cs_energyanalysi\n+0001b860: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+0001b870: 5f73 7263 5f67 726f 6d61 6373 5f63 6f6d _src_gromacs_com\n+0001b880: 6d61 6e64 6c69 6e65 3c2f 7469 746c 653e mandline\n+0001b890: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ..\n+0001b910: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2262 .\n+0001b980: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...modul\n+0001b9f0: 655f 7372 635f 6772 6f6d 6163 735f 6577 e_src_gromacs_ew\n+0001ba00: 616c 6426 2334 353b 2667 743b 6d6f 6475 ald->modu\n+0001ba10: 6c65 5f73 7263 5f67 726f 6d61 6373 5f66 le_src_gromacs_f\n+0001ba20: 6674 3c2f 7469 746c 653e 0a3c 7061 7468 ft..\n+0001bb90: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....m\n+0001bc00: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001bc10: 735f 6577 616c 6426 2334 353b 2667 743b s_ewald->\n+0001bc20: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001bc30: 6373 5f67 6d78 6c69 623c 2f74 6974 6c65 cs_gmxlib</title\n+0001bc40: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+0001bc50: 6e65 2220 7374 726f 6b65 3d22 2362 6662 ne\" stroke=\"#bfb\n+0001bc60: 6662 6622 2064 3d22 4d31 3936 2e39 392c fbf\" d=\"M196.99,\n+0001bc70: 2d31 3035 2e37 3843 3139 302e 392c 2d31 -105.78C190.9,-1\n+0001bc80: 3335 2e34 3920 3136 362c 2d32 3132 2e39 35.49 166,-212.9\n+0001bc90: 3920 3136 362c 2d32 3739 2e39 3220 3136 9 166,-279.92 16\n+0001bca0: 362c 2d37 3834 2e38 3820 3136 362c 2d37 6,-784.88 166,-7\n+0001bcb0: 3834 2e38 3820 3136 362c 2d37 3834 2e38 84.88 166,-784.8\n+0001bcc0: 3820 3136 362c 2d38 3139 2031 3535 2e34 8 166,-819 155.4\n+0001bcd0: 382c 2d38 3337 2e35 3320 3138 312c 2d38 8,-837.53 181,-8\n+0001bce0: 3630 2e31 3820 3232 332e 3938 2c2d 3839 60.18 223.98,-89\n+0001bcf0: 382e 3332 2036 3231 2e39 342c 2d39 3036 8.32 621.94,-906\n+0001bd00: 2e35 2037 3533 2e38 352c 2d39 3038 2e31 .5 753.85,-908.1\n+0001bd10: 3922 2f3e 0a3c 706f 6c79 676f 6e20 6669 9\"/>.<polygon fi\n+0001bd20: 6c6c 3d22 2362 6662 6662 6622 2073 7472 ll=\"#bfbfbf\" str\n+0001bd30: 6f6b 653d 2223 6266 6266 6266 2220 706f oke=\"#bfbfbf\" po\n+0001bd40: 696e 7473 3d22 3735 332e 3933 2c2d 3931 ints=\"753.93,-91\n+0001bd50: 312e 3639 2037 3633 2e39 372c 2d39 3038 1.69 763.97,-908\n+0001bd60: 2e33 3220 3735 342e 3031 2c2d 3930 342e .32 754.01,-904.\n+0001bd70: 3639 2037 3533 2e39 332c 2d39 3131 2e36 69 753.93,-911.6\n+0001bd80: 3922 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 9\"/>.</g>.<!-- m\n+0001bd90: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001bda0: 735f 6577 616c 6426 2334 353b 2667 743b s_ewald->\n+0001bdb0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001bdc0: 6373 5f68 6172 6477 6172 6520 2d2d 3e0a cs_hardware -->.\n+0001bdd0: 3c67 2069 643d 2265 6467 6531 3738 2220 <g id=\"edge178\" \n+0001bde0: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n+0001bdf0: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+0001be00: 6772 6f6d 6163 735f 6577 616c 6426 2334 gromacs_ewald\n+0001be10: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+0001be20: 5f67 726f 6d61 6373 5f68 6172 6477 6172 _gromacs_hardwar\n+0001be30: 653c 2f74 6974 6c65 3e0a 3c70 6174 6820 e......module_src_grom\n+0001c0f0: 6163 735f 6577 616c 6426 2334 353b 2667 acs_ewald-&g\n+0001c100: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001c110: 6d61 6373 5f6d 646c 6962 3c2f 7469 746c macs_mdlib....\n+0001c2e0: 0a3c 6720 6964 3d22 6564 6765 3138 3222 ..<\n+0001c300: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+0001c310: 5f67 726f 6d61 6373 5f65 7761 6c64 2623 _gromacs_ewald&#\n+0001c320: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+0001c330: 635f 6772 6f6d 6163 735f 6d64 7479 7065 c_gromacs_mdtype\n+0001c340: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s......modul\n-0001c4b0: 655f 7372 635f 6772 6f6d 6163 735f 6170 e_src_gromacs_ap\n-0001c4c0: 706c 6965 645f 666f 7263 6573 2623 3435 plied_forces-\n-0001c4d0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0001c4e0: 6772 6f6d 6163 735f 6d64 7275 6e75 7469 gromacs_mdrunuti\n-0001c4f0: 6c69 7479 3c2f 7469 746c 653e 0a3c 7061 lity......\n-0001c710: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0001c720: 6373 5f6e 626e 786d 2623 3435 3b26 6774 cs_nbnxm->\n-0001c730: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-0001c740: 6163 735f 676d 786c 6962 3c2f 7469 746c acs_gmxlib</titl\n-0001c750: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n-0001c760: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n-0001c770: 6266 6266 2220 643d 224d 3136 3139 2e34 bfbf\" d=\"M1619.4\n-0001c780: 322c 2d39 3631 2e33 4331 3630 312e 3535 2,-961.3C1601.55\n-0001c790: 2c2d 3935 312e 3439 2031 3537 342e 3332 ,-951.49 1574.32\n-0001c7a0: 2c2d 3933 362e 3536 2031 3535 342e 3034 ,-936.56 1554.04\n-0001c7b0: 2c2d 3932 352e 3434 222f 3e0a 3c70 6f6c ,-925.44\"/>.<pol\n-0001c7c0: 7967 6f6e 2066 696c 6c3d 2223 6266 6266 ygon fill=\"#bfbf\n-0001c7d0: 6266 2220 7374 726f 6b65 3d22 2362 6662 bf\" stroke=\"#bfb\n-0001c7e0: 6662 6622 2070 6f69 6e74 733d 2231 3535 fbf\" points=\"155\n-0001c7f0: 352e 3732 2c2d 3932 322e 3337 2031 3534 5.72,-922.37 154\n-0001c800: 352e 3237 2c2d 3932 302e 3633 2031 3535 5.27,-920.63 155\n-0001c810: 322e 3336 2c2d 3932 382e 3531 2031 3535 2.36,-928.51 155\n-0001c820: 352e 3732 2c2d 3932 322e 3337 222f 3e0a 5.72,-922.37\"/>.\n-0001c830: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n-0001c840: 5f73 7263 5f67 726f 6d61 6373 5f6e 626e _src_gromacs_nbn\n-0001c850: 786d 2623 3435 3b26 6774 3b6d 6f64 756c xm->modul\n-0001c860: 655f 7372 635f 6772 6f6d 6163 735f 6861 e_src_gromacs_ha\n-0001c870: 7264 7761 7265 202d 2d3e 0a3c 6720 6964 rdware -->.<g id\n-0001c880: 3d22 6564 6765 3138 3622 2063 6c61 7373 =\"edge186\" class\n-0001c890: 3d22 6564 6765 223e 0a3c 7469 746c 653e =\"edge\">.<title>\n-0001c8a0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0001c8b0: 6373 5f6e 626e 786d 2623 3435 3b26 6774 cs_nbnxm->\n-0001c8c0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-0001c8d0: 6163 735f 6861 7264 7761 7265 3c2f 7469 acs_hardware</ti\n-0001c8e0: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n-0001c8f0: 226e 6f6e 6522 2073 7472 6f6b 653d 2272 \"none\" stroke=\"r\n-0001c900: 6564 2220 643d 224d 3136 3632 2e38 352c ed\" d=\"M1662.85,\n-0001c910: 2d39 3831 2e33 3743 3137 3239 2e33 322c -981.37C1729.32,\n-0001c920: 2d31 3030 322e 3436 2031 3931 312e 3531 -1002.46 1911.51\n-0001c930: 2c2d 3130 3630 2e32 3720 3139 3930 2e35 ,-1060.27 1990.5\n-0001c940: 372c 2d31 3038 352e 3335 222f 3e0a 3c70 7,-1085.35\"/>.<p\n-0001c950: 6f6c 7967 6f6e 2066 696c 6c3d 2272 6564 olygon fill=\"red\n-0001c960: 2220 7374 726f 6b65 3d22 7265 6422 2070 \" stroke=\"red\" p\n-0001c970: 6f69 6e74 733d 2231 3938 392e 3939 2c2d oints=\"1989.99,-\n-0001c980: 3130 3838 2e38 3420 3230 3030 2e35 382c 1088.84 2000.58,\n-0001c990: 2d31 3038 382e 3532 2031 3939 322e 312c -1088.52 1992.1,\n-0001c9a0: 2d31 3038 322e 3136 2031 3938 392e 3939 -1082.16 1989.99\n-0001c9b0: 2c2d 3130 3838 2e38 3422 2f3e 0a3c 2f67 ,-1088.84\"/>.</g\n-0001c9c0: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n-0001c9d0: 635f 6772 6f6d 6163 735f 6e62 6e78 6d26 c_gromacs_nbnxm&\n-0001c9e0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0001c9f0: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n-0001ca00: 202d 2d3e 0a3c 6720 6964 3d22 6564 6765 -->.<g id=\"edge\n-0001ca10: 3138 3722 2063 6c61 7373 3d22 6564 6765 187\" class=\"edge\n-0001ca20: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n-0001ca30: 5f73 7263 5f67 726f 6d61 6373 5f6e 626e _src_gromacs_nbn\n-0001ca40: 786d 2623 3435 3b26 6774 3b6d 6f64 756c xm->modul\n-0001ca50: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-0001ca60: 6c69 623c 2f74 6974 6c65 3e0a 3c70 6174 lib....\n-0001cbc0: 0a3c 6720 6964 3d22 6564 6765 3138 3222 ..<\n-0001cbe0: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-0001cbf0: 5f67 726f 6d61 6373 5f6e 626e 786d 2623 _gromacs_nbnxm&#\n-0001cc00: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001cc10: 635f 6772 6f6d 6163 735f 6d64 7479 7065 c_gromacs_mdtype\n-0001cc20: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s......module_src_gr\n-0001cda0: 6f6d 6163 735f 6e62 6e78 6d26 2334 353b omacs_nbnxm-\n-0001cdb0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0001cdc0: 726f 6d61 6373 5f64 6f6d 6465 633c 2f74 romacs_domdec....\n-0001cff0: 0a3c 6720 6964 3d22 6564 6765 3138 3822 ..<\n-0001d010: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-0001d020: 5f67 726f 6d61 6373 5f6e 626e 786d 2623 _gromacs_nbnxm&#\n-0001d030: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001d040: 635f 6772 6f6d 6163 735f 6577 616c 643c c_gromacs_ewald<\n-0001d050: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>....<\n-0001d1a0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0001d1b0: 726f 6d61 6373 5f6e 626e 786d 2623 3435 romacs_nbnxm-\n-0001d1c0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0001d1d0: 6772 6f6d 6163 735f 6c69 7374 6564 5f66 gromacs_listed_f\n-0001d1e0: 6f72 6365 7320 2d2d 3e0a 3c67 2069 643d orces -->..m\n-0001d210: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0001d220: 735f 6e62 6e78 6d26 2334 353b 2667 743b s_nbnxm->\n-0001d230: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0001d240: 6373 5f6c 6973 7465 645f 666f 7263 6573 cs_listed_forces\n-0001d250: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ....\n-0001d400: 0a3c 6720 6964 3d22 6564 6765 3138 3322 ..<\n-0001d420: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-0001d430: 5f67 726f 6d61 6373 5f6e 626e 786d 2623 _gromacs_nbnxm&#\n-0001d440: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001d450: 635f 6772 6f6d 6163 735f 6770 755f 7574 c_gromacs_gpu_ut\n-0001d460: 696c 733c 2f74 6974 6c65 3e0a 3c70 6174 ils......modul\n-0001d5a0: 655f 7372 635f 6772 6f6d 6163 735f 7472 e_src_gromacs_tr\n-0001d5b0: 616a 6563 746f 7279 616e 616c 7973 6973 ajectoryanalysis\n-0001d5c0: 3c2f 7469 746c 653e 0a3c 6720 6964 3d22 ...trajectoryanaly\n-0001d700: 7369 733c 2f74 6578 743e 0a3c 2f61 3e0a sis..\n-0001d710: 3c2f 673e 0a3c 2f67 3e0a 3c21 2d2d 206d ....\n-0001d790: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0001d7a0: 6373 5f74 7261 6a65 6374 6f72 7961 6e61 cs_trajectoryana\n-0001d7b0: 6c79 7369 7326 2334 353b 2667 743b 6d6f lysis->mo\n-0001d7c0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0001d7d0: 5f66 696c 6569 6f3c 2f74 6974 6c65 3e0a _fileio.\n-0001d7e0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ...<\n-0001d8f0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0001d900: 726f 6d61 6373 5f74 7261 6a65 6374 6f72 romacs_trajector\n-0001d910: 7961 6e61 6c79 7369 7326 2334 353b 2667 yanalysis-&g\n-0001d920: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-0001d930: 6d61 6373 5f67 6d78 616e 6120 2d2d 3e0a macs_gmxana -->.\n-0001d940: 3c67 2069 643d 2265 6467 6531 3935 2220 .module_src_\n-0001d970: 6772 6f6d 6163 735f 7472 616a 6563 746f gromacs_trajecto\n-0001d980: 7279 616e 616c 7973 6973 2623 3435 3b26 ryanalysis-&\n-0001d990: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-0001d9a0: 6f6d 6163 735f 676d 7861 6e61 3c2f 7469 omacs_gmxana..\n-0001db60: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ...<\n-0001db90: 6720 6964 3d22 6e6f 6465 3335 2220 636c g id=\"node35\" cl\n-0001dba0: 6173 733d 226e 6f64 6522 3e0a 3c74 6974 ass=\"node\">.module_src_gr\n-0001dbc0: 6f6d 6163 735f 616e 616c 7973 6973 6461 omacs_analysisda\n-0001dbd0: 7461 3c2f 7469 746c 653e 0a3c 6720 6964 ta...analysisd\n-0001dd00: 6174 613c 2f74 6578 743e 0a3c 2f61 3e0a ata..\n-0001dd10: 3c2f 673e 0a3c 2f67 3e0a 3c21 2d2d 206d ..\n-0001dd70: 0a3c 6720 6964 3d22 6564 6765 3139 3022 ..<\n-0001dd90: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-0001dda0: 5f67 726f 6d61 6373 5f74 7261 6a65 6374 _gromacs_traject\n-0001ddb0: 6f72 7961 6e61 6c79 7369 7326 2334 353b oryanalysis-\n-0001ddc0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0001ddd0: 726f 6d61 6373 5f61 6e61 6c79 7369 7364 romacs_analysisd\n-0001dde0: 6174 613c 2f74 6974 6c65 3e0a 3c70 6174 ata...<\n-0001dee0: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module\n-0001df60: 5f73 7263 5f67 726f 6d61 6373 5f74 7261 _src_gromacs_tra\n-0001df70: 6a65 6374 6f72 7961 6e61 6c79 7369 7326 jectoryanalysis&\n-0001df80: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0001df90: 7263 5f67 726f 6d61 6373 5f72 616e 646f rc_gromacs_rando\n-0001dfa0: 6d3c 2f74 6974 6c65 3e0a 3c70 6174 6820 m......module_\n-0001e1d0: 7372 635f 6772 6f6d 6163 735f 636f 6f72 src_gromacs_coor\n-0001e1e0: 6469 6e61 7465 696f 3c2f 7469 746c 653e dinateio\n-0001e1f0: 0a3c 6720 6964 3d22 615f 6e6f 6465 3430 ...coo\n-0001e310: 7264 696e 6174 6569 6f3c 2f74 6578 743e rdinateio\n-0001e320: 0a3c 2f61 3e0a 3c2f 673e 0a3c 2f67 3e0a ....\n-0001e330: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..modu\n-0001e3b0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f74 le_src_gromacs_t\n-0001e3c0: 7261 6a65 6374 6f72 7961 6e61 6c79 7369 rajectoryanalysi\n-0001e3d0: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n-0001e3e0: 5f73 7263 5f67 726f 6d61 6373 5f63 6f6f _src_gromacs_coo\n-0001e3f0: 7264 696e 6174 6569 6f3c 2f74 6974 6c65 rdinateio</title\n-0001e400: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n-0001e410: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n-0001e420: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n-0001e430: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n-0001e440: 3130 3930 2e31 342c 2d36 3434 2e38 3243 1090.14,-644.82C\n-0001e450: 3130 3938 2e33 362c 2d36 3336 2e34 3820 1098.36,-636.48 \n-0001e460: 3131 3039 2e33 382c 2d36 3235 2e33 2031 1109.38,-625.3 1\n-0001e470: 3131 382e 3737 2c2d 3631 352e 3737 222f 118.77,-615.77\"/\n-0001e480: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n-0001e490: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n-0001e4a0: 3d22 2332 3832 6663 6322 2070 6f69 6e74 =\"#282fcc\" point\n-0001e4b0: 733d 2231 3132 312e 3335 2c2d 3631 382e s=\"1121.35,-618.\n-0001e4c0: 3134 2031 3132 352e 3838 2c2d 3630 382e 14 1125.88,-608.\n-0001e4d0: 3537 2031 3131 362e 3336 2c2d 3631 332e 57 1116.36,-613.\n-0001e4e0: 3233 2031 3132 312e 3335 2c2d 3631 382e 23 1121.35,-618.\n-0001e4f0: 3134 222f 3e0a 3c2f 673e 0a3c 212d 2d20 14\"/>.</g>.<!-- \n-0001e500: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-0001e510: 6373 5f74 7261 6a65 6374 6f72 7961 6e61 cs_trajectoryana\n-0001e520: 6c79 7369 7326 2334 353b 2667 743b 6d6f lysis->mo\n-0001e530: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0001e540: 5f67 6d78 7072 6570 726f 6365 7373 202d _gmxpreprocess -\n-0001e550: 2d3e 0a3c 6720 6964 3d22 6564 6765 3139 ->.<g id=\"edge19\n-0001e560: 3622 2063 6c61 7373 3d22 6564 6765 223e 6\" class=\"edge\">\n-0001e570: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n-0001e580: 7263 5f67 726f 6d61 6373 5f74 7261 6a65 rc_gromacs_traje\n-0001e590: 6374 6f72 7961 6e61 6c79 7369 7326 2334 ctoryanalysis\n-0001e5a0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0001e5b0: 5f67 726f 6d61 6373 5f67 6d78 7072 6570 _gromacs_gmxprep\n-0001e5c0: 726f 6365 7373 3c2f 7469 746c 653e 0a3c rocess.<\n-0001e5d0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-0001e5e0: 2073 7472 6f6b 653d 2223 3263 6363 3238 stroke=\"#2ccc28\n-0001e5f0: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n-0001e600: 6179 3d22 352c 3222 2064 3d22 4d31 3134 ay=\"5,2\" d=\"M114\n-0001e610: 332e 332c 2d36 3538 2e37 3743 3132 3431 3.3,-658.77C1241\n-0001e620: 2e31 332c 2d36 3539 2e36 3920 3134 3330 .13,-659.69 1430\n-0001e630: 2e38 312c 2d36 3637 2e31 3820 3135 3836 .81,-667.18 1586\n-0001e640: 2c2d 3730 372e 3537 2031 3732 302e 3338 ,-707.57 1720.38\n-0001e650: 2c2d 3734 322e 3535 2031 3739 362e 312c ,-742.55 1796.1,\n-0001e660: 2d37 3137 2e30 3420 3138 3732 2c2d 3833 -717.04 1872,-83\n-0001e670: 332e 3331 2031 3932 382e 3532 2c2d 3931 3.31 1928.52,-91\n-0001e680: 392e 3920 3137 3435 2e31 382c 2d38 3630 9.9 1745.18,-860\n-0001e690: 2e38 3420 3136 3438 2c2d 3839 362e 3138 .84 1648,-896.18\n-0001e6a0: 2031 3632 362e 3131 2c2d 3930 342e 3134 1626.11,-904.14\n-0001e6b0: 2031 3632 342e 3035 2c2d 3931 332e 3037 1624.05,-913.07\n-0001e6c0: 2031 3630 332c 2d39 3233 2e30 3520 3133 1603,-923.05 13\n-0001e6d0: 3338 2e32 2c2d 3130 3438 2e36 3620 3132 38.2,-1048.66 12\n-0001e6e0: 3438 2e32 342c 2d31 3032 322e 3939 2039 48.24,-1022.99 9\n-0001e6f0: 3833 2c2d 3131 3437 2e36 3620 3933 332e 83,-1147.66 933.\n-0001e700: 3038 2c2d 3131 3731 2e31 3220 3930 332e 08,-1171.12 903.\n-0001e710: 342c 2d31 3136 322e 3636 2038 3736 2c2d 4,-1162.66 876,-\n-0001e720: 3132 3130 2e35 3320 3837 302e 3037 2c2d 1210.53 870.07,-\n-0001e730: 3132 3230 2e39 2038 3637 2e39 382c 2d31 1220.9 867.98,-1\n-0001e740: 3232 382e 3535 2038 3736 2c2d 3132 3337 228.55 876,-1237\n-0001e750: 2e34 2039 3330 2e37 332c 2d31 3239 372e .4 930.73,-1297.\n-0001e760: 3820 3131 3630 2e39 352c 2d31 3235 382e 8 1160.95,-1258.\n-0001e770: 3038 2031 3234 312c 2d31 3237 332e 3420 08 1241,-1273.4 \n-0001e780: 3132 3531 2e39 2c2d 3132 3735 2e34 3920 1251.9,-1275.49 \n-0001e790: 3133 3837 2e36 332c 2d31 3331 342e 3939 1387.63,-1314.99\n-0001e7a0: 2031 3435 392e 332c 2d31 3333 352e 3932 1459.3,-1335.92\n-0001e7b0: 222f 3e0a 3c70 6f6c 7967 6f6e 2066 696c \"/>...<\n-0001e830: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0001e840: 726f 6d61 6373 5f74 7261 6a65 6374 6f72 romacs_trajector\n-0001e850: 7961 6e61 6c79 7369 7326 2334 353b 2667 yanalysis-&g\n-0001e860: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-0001e870: 6d61 6373 5f73 7461 7469 7374 6963 7320 macs_statistics \n-0001e880: 2d2d 3e0a 3c67 2069 643d 2265 6467 6531 -->..module_\n-0001e8b0: 7372 635f 6772 6f6d 6163 735f 7472 616a src_gromacs_traj\n-0001e8c0: 6563 746f 7279 616e 616c 7973 6973 2623 ectoryanalysis&#\n-0001e8d0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001e8e0: 635f 6772 6f6d 6163 735f 7374 6174 6973 c_gromacs_statis\n-0001e8f0: 7469 6373 3c2f 7469 746c 653e 0a3c 7061 tics......module_\n-0001ea70: 7372 635f 6772 6f6d 6163 735f 7472 616a src_gromacs_traj\n-0001ea80: 6563 746f 7279 616e 616c 7973 6973 2623 ectoryanalysis&#\n-0001ea90: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001eaa0: 635f 6772 6f6d 6163 735f 636f 6d6d 616e c_gromacs_comman\n-0001eab0: 646c 696e 653c 2f74 6974 6c65 3e0a 3c70 dline..<\n-0001eb40: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n-0001eb50: 3832 6663 6322 2073 7472 6f6b 653d 2223 82fcc\" stroke=\"#\n-0001eb60: 3238 3266 6363 2220 706f 696e 7473 3d22 282fcc\" points=\"\n-0001eb70: 3133 3835 2e38 322c 2d36 3038 2e34 3920 1385.82,-608.49 \n-0001eb80: 3133 3935 2e31 2c2d 3630 332e 3337 2031 1395.1,-603.37 1\n-0001eb90: 3338 342e 3635 2c2d 3630 312e 3539 2031 384.65,-601.59 1\n-0001eba0: 3338 352e 3832 2c2d 3630 382e 3439 222f 385.82,-608.49\"/\n-0001ebb0: 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f 6475 >...\n-0001edc0: 3c67 2069 643d 2265 6467 6531 3938 2220 .module_src_\n-0001edf0: 6772 6f6d 6163 735f 656e 6572 6779 616e gromacs_energyan\n-0001ee00: 616c 7973 6973 2623 3435 3b26 6774 3b6d alysis->m\n-0001ee10: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0001ee20: 735f 6669 6c65 696f 3c2f 7469 746c 653e s_fileio\n-0001ee30: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......mod\n-0001efb0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-0001efc0: 656e 6572 6779 616e 616c 7973 6973 2623 energyanalysis&#\n-0001efd0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-0001efe0: 635f 6772 6f6d 6163 735f 676d 7861 6e61 c_gromacs_gmxana\n-0001eff0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ....<\n-0001f290: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0001f2a0: 726f 6d61 6373 5f65 6e65 7267 7961 6e61 romacs_energyana\n-0001f2b0: 6c79 7369 7326 2334 353b 2667 743b 6d6f lysis->mo\n-0001f2c0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0001f2d0: 5f73 7461 7469 7374 6963 7320 2d2d 3e0a _statistics -->.\n-0001f2e0: 3c67 2069 643d 2265 6467 6531 3939 2220 .module_src_\n-0001f310: 6772 6f6d 6163 735f 656e 6572 6779 616e gromacs_energyan\n-0001f320: 616c 7973 6973 2623 3435 3b26 6774 3b6d alysis->m\n-0001f330: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-0001f340: 735f 7374 6174 6973 7469 6373 3c2f 7469 s_statistics......mo\n-0001f4c0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-0001f4d0: 5f65 6e65 7267 7961 6e61 6c79 7369 7326 _energyanalysis&\n-0001f4e0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-0001f4f0: 7263 5f67 726f 6d61 6373 5f63 6f6d 6d61 rc_gromacs_comma\n-0001f500: 6e64 6c69 6e65 3c2f 7469 746c 653e 0a3c ndline.<\n-0001f510: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-0001f520: 2073 7472 6f6b 653d 2262 6c61 636b 2220 stroke=\"black\" \n-0001f530: 7374 726f 6b65 2d64 6173 6861 7272 6179 stroke-dasharray\n-0001f540: 3d22 352c 3222 2064 3d22 4d39 3138 2c2d =\"5,2\" d=\"M918,-\n-0001f550: 3635 312e 3739 4331 3032 332e 3538 2c2d 651.79C1023.58,-\n-0001f560: 3634 302e 3439 2031 3236 382e 3731 2c2d 640.49 1268.71,-\n-0001f570: 3631 342e 3237 2031 3338 302e 3039 2c2d 614.27 1380.09,-\n-0001f580: 3630 322e 3335 222f 3e0a 3c70 6f6c 7967 602.35\"/>...<\n-0001f600: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-0001f610: 726f 6d61 6373 5f65 7761 6c64 2623 3435 romacs_ewald-\n-0001f620: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-0001f630: 6772 6f6d 6163 735f 6666 7420 2d2d 3e0a gromacs_fft -->.\n-0001f640: 3c67 2069 643d 2265 6467 6532 3032 2220 .module_src_\n-0001f670: 6772 6f6d 6163 735f 6577 616c 6426 2334 gromacs_ewald\n-0001f680: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0001f690: 5f67 726f 6d61 6373 5f66 6674 3c2f 7469 _gromacs_fft......module_src_gr\n-0001f8d0: 6f6d 6163 735f 6577 616c 6426 2334 353b omacs_ewald-\n-0001f8e0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0001f8f0: 726f 6d61 6373 5f67 6d78 6c69 623c 2f74 romacs_gmxlib.\n-0001fa40: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 ....\n-0001fb00: 3c67 2069 643d 2265 6467 6532 3033 2220 .module_src_\n-0001fb30: 6772 6f6d 6163 735f 6577 616c 6426 2334 gromacs_ewald\n-0001fb40: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-0001fb50: 5f67 726f 6d61 6373 5f68 6172 6477 6172 _gromacs_hardwar\n-0001fb60: 653c 2f74 6974 6c65 3e0a 3c70 6174 6820 e......module_src_grom\n-0001fd90: 6163 735f 6577 616c 6426 2334 353b 2667 acs_ewald-&g\n-0001fda0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-0001fdb0: 6d61 6373 5f6d 646c 6962 3c2f 7469 746c macs_mdlib..\n-0001fee0: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....module_src_gr\n-0001ffd0: 6f6d 6163 735f 6577 616c 6426 2334 353b omacs_ewald-\n-0001ffe0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-0001fff0: 726f 6d61 6373 5f6d 6474 7970 6573 3c2f romacs_mdtypes.....\n-00020170: 3c67 2069 643d 2265 6467 6532 3034 2220 .module_src_\n-000201a0: 6772 6f6d 6163 735f 6577 616c 6426 2334 gromacs_ewald\n-000201b0: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n-000201c0: 5f67 726f 6d61 6373 5f64 6f6d 6465 633c _gromacs_domdec<\n-000201d0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>....\n-00020340: 0a3c 6720 6964 3d22 6564 6765 3230 3822 ..<\n-00020360: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-00020370: 5f67 726f 6d61 6373 5f65 7761 6c64 2623 _gromacs_ewald&#\n-00020380: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-00020390: 635f 6772 6f6d 6163 735f 6e62 6e78 6d3c c_gromacs_nbnxm<\n-000203a0: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>......module_\n-00020560: 7372 635f 6772 6f6d 6163 735f 6577 616c src_gromacs_ewal\n-00020570: 6426 2334 353b 2667 743b 6d6f 6475 6c65 d->module\n-00020580: 5f73 7263 5f67 726f 6d61 6373 5f67 7075 _src_gromacs_gpu\n-00020590: 5f75 7469 6c73 3c2f 7469 746c 653e 0a3c _utils.<\n-000205a0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-000205b0: 2073 7472 6f6b 653d 2272 6564 2220 643d stroke=\"red\" d=\n-000205c0: 224d 3235 3031 2e35 372c 2d31 3034 2e33 \"M2501.57,-104.3\n-000205d0: 3643 3235 3234 2e34 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6163 735f 7461 626c 6573 3c2f gromacs_tables</\n-00020b20: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n-00020b30: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n-00020b40: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n-00020b50: 2d64 6173 6861 7272 6179 3d22 352c 3222 -dasharray=\"5,2\"\n-00020b60: 2064 3d22 4d34 3236 2e33 342c 2d31 3431 d=\"M426.34,-141\n-00020b70: 2e38 3643 3433 342e 3931 2c2d 3133 332e .86C434.91,-133.\n-00020b80: 3320 3434 362e 3439 2c2d 3132 312e 3735 3 446.49,-121.75\n-00020b90: 2034 3536 2e32 2c2d 3131 322e 3036 222f 456.2,-112.06\"/\n-00020ba0: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n-00020bb0: 2223 3238 3266 6363 2220 7374 726f 6b65 \"#282fcc\" stroke\n-00020bc0: 3d22 2332 3832 6663 6322 2070 6f69 6e74 =\"#282fcc\" point\n-00020bd0: 733d 2234 3538 2e38 392c 2d31 3134 2e33 s=\"458.89,-114.3\n-00020be0: 3220 3436 332e 352c 2d31 3034 2e37 3820 2 463.5,-104.78 \n-00020bf0: 3435 332e 3935 2c2d 3130 392e 3337 2034 453.95,-109.37 4\n-00020c00: 3538 2e38 392c 2d31 3134 2e33 3222 2f3e 58.89,-114.32\"/>\n-00020c10: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n-00020c20: 655f 7372 635f 6772 6f6d 6163 735f 6c69 e_src_gromacs_li\n-00020c30: 7374 6564 5f66 6f72 6365 7326 2334 353b sted_forces-\n-00020c40: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00020c50: 726f 6d61 6373 5f68 6172 6477 6172 6520 romacs_hardware \n-00020c60: 2d2d 3e0a 3c67 2069 643d 2265 6467 6532 -->.<g id=\"edge2\n-00020c70: 3134 2220 636c 6173 733d 2265 6467 6522 14\" class=\"edge\"\n-00020c80: 3e0a 3c74 6974 6c65 3e6d 6f64 756c 655f >.<title>module_\n-00020c90: 7372 635f 6772 6f6d 6163 735f 6c69 7374 src_gromacs_list\n-00020ca0: 6564 5f66 6f72 6365 7326 2334 353b 2667 ed_forces-&g\n-00020cb0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-00020cc0: 6d61 6373 5f68 6172 6477 6172 653c 2f74 macs_hardware</t\n-00020cd0: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-00020ce0: 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3834 2e37 .45 1974,-1084.7\n-00020dd0: 3920 3139 3738 2e35 322c 2d31 3038 352e 9 1978.52,-1085.\n-00020de0: 3433 2031 3938 332e 3231 2c2d 3130 3836 43 1983.21,-1086\n-00020df0: 2e32 3620 3139 3837 2e38 362c 2d31 3038 .26 1987.86,-108\n-00020e00: 372e 3138 222f 3e0a 3c70 6f6c 7967 6f6e 7.18\"/>.<polygon\n-00020e10: 2066 696c 6c3d 2272 6564 2220 7374 726f fill=\"red\" stro\n-00020e20: 6b65 3d22 7265 6422 2070 6f69 6e74 733d ke=\"red\" points=\n-00020e30: 2231 3938 372e 3339 2c2d 3130 3930 2e36 \"1987.39,-1090.6\n-00020e40: 3620 3139 3937 2e39 2c2d 3130 3839 2e33 6 1997.9,-1089.3\n-00020e50: 3320 3139 3838 2e38 352c 2d31 3038 332e 3 1988.85,-1083.\n-00020e60: 3831 2031 3938 372e 3339 2c2d 3130 3930 81 1987.39,-1090\n-00020e70: 2e36 3622 2f3e 0a3c 2f67 3e0a 3c21 2d2d .66\"/>.</g>.<!--\n-00020e80: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n-00020e90: 6163 735f 6c69 7374 6564 5f66 6f72 6365 acs_listed_force\n-00020ea0: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n-00020eb0: 5f73 7263 5f67 726f 6d61 6373 5f6d 646c _src_gromacs_mdl\n-00020ec0: 6962 202d 2d3e 0a3c 6720 6964 3d22 6564 ib -->.<g id=\"ed\n-00020ed0: 6765 3231 3522 2063 6c61 7373 3d22 6564 ge215\" class=\"ed\n-00020ee0: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n-00020ef0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6c le_src_gromacs_l\n-00020f00: 6973 7465 645f 666f 7263 6573 2623 3435 isted_forces-\n-00020f10: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00020f20: 6772 6f6d 6163 735f 6d64 6c69 623c 2f74 gromacs_mdlib</t\n-00020f30: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-00020f40: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-00020f50: 2362 6662 6662 6622 2064 3d22 4d34 3239 #bfbfbf\" d=\"M429\n-00020f60: 2e36 332c 2d31 3637 2e39 3743 3433 372e .63,-167.97C437.\n-00020f70: 362c 2d31 3737 2e34 3520 3434 362c 2d31 6,-177.45 446,-1\n-00020f80: 3931 2e33 3420 3435 312c 2d32 3034 2e36 91.34 451,-204.6\n-00020f90: 3120 3436 332e 3033 2c2d 3233 362e 3534 1 463.03,-236.54\n-00020fa0: 2034 3636 2c2d 3234 352e 3739 2034 3636 466,-245.79 466\n-00020fb0: 2c2d 3237 392e 3932 2034 3636 2c2d 3533 ,-279.92 466,-53\n-00020fc0: 332e 3420 3436 362c 2d35 3333 2e34 2034 3.4 466,-533.4 4\n-00020fd0: 3636 2c2d 3533 332e 3420 3436 362c 2d35 66,-533.4 466,-5\n-00020fe0: 3637 2e35 3220 3436 302e 3435 2c2d 3538 67.52 460.45,-58\n-00020ff0: 312e 3435 2034 3831 2c2d 3630 382e 3720 1.45 481,-608.7 \n-00021000: 3530 322e 3037 2c2d 3633 362e 3633 2035 502.07,-636.63 5\n-00021010: 3232 2e31 382c 2d36 3234 2e38 3720 3535 22.18,-624.87 55\n-00021020: 312c 2d36 3434 2e37 2035 3635 2e37 352c 1,-644.7 565.75,\n-00021030: 2d36 3534 2e38 3520 3536 342e 3831 2c2d -654.85 564.81,-\n-00021040: 3636 332e 3934 2035 3831 2c2d 3637 312e 663.94 581,-671.\n-00021050: 3537 2036 3737 2e33 372c 2d37 3137 2e30 57 677.37,-717.0\n-00021060: 3120 3732 312e 3633 2c2d 3636 322e 3133 1 721.63,-662.13\n-00021070: 2038 3138 2c2d 3730 372e 3537 2038 3334 818,-707.57 834\n-00021080: 2e31 392c 2d37 3135 2e32 2038 3331 2e35 .19,-715.2 831.5\n-00021090: 372c 2d37 3237 2e33 3420 3834 382c 2d37 7,-727.34 848,-7\n-000210a0: 3334 2e34 3420 3934 312e 382c 2d37 3734 34.44 941.8,-774\n-000210b0: 2e39 3820 3132 3534 2e39 392c 2d37 3831 .98 1254.99,-781\n-000210c0: 2e36 3220 3133 3635 2e32 392c 2d37 3832 .62 1365.29,-782\n-000210d0: 2e36 3822 2f3e 0a3c 706f 6c79 676f 6e20 .68\"/>.<polygon \n-000210e0: 6669 6c6c 3d22 2362 6662 6662 6622 2073 fill=\"#bfbfbf\" s\n-000210f0: 7472 6f6b 653d 2223 6266 6266 6266 2220 troke=\"#bfbfbf\" \n-00021100: 706f 696e 7473 3d22 3133 3635 2e35 392c points=\"1365.59,\n-00021110: 2d37 3836 2e31 3920 3133 3735 2e36 322c -786.19 1375.62,\n-00021120: 2d37 3832 2e37 3720 3133 3635 2e36 352c -782.77 1365.65,\n-00021130: 2d37 3739 2e31 3920 3133 3635 2e35 392c -779.19 1365.59,\n-00021140: 2d37 3836 2e31 3922 2f3e 0a3c 2f67 3e0a -786.19\"/>.</g>.\n-00021150: 3c21 2d2d 206d 6f64 756c 655f 7372 635f <!-- module_src_\n-00021160: 6772 6f6d 6163 735f 6c69 7374 6564 5f66 gromacs_listed_f\n-00021170: 6f72 6365 7326 2334 353b 2667 743b 6d6f orces->mo\n-00021180: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00021190: 5f6d 6474 7970 6573 202d 2d3e 0a3c 6720 _mdtypes -->.<g \n-000211a0: 6964 3d22 6564 6765 3231 3122 2063 6c61 id=\"edge211\" cla\n-000211b0: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.<titl\n-000211c0: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n-000211d0: 6d61 6373 5f6c 6973 7465 645f 666f 7263 macs_listed_forc\n-000211e0: 6573 2623 3435 3b26 6774 3b6d 6f64 756c es->modul\n-000211f0: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-00021200: 7479 7065 733c 2f74 6974 6c65 3e0a 3c70 types.\n-00021330: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....module_src_gr\n-00021420: 6f6d 6163 735f 6c69 7374 6564 5f66 6f72 omacs_listed_for\n-00021430: 6365 7326 2334 353b 2667 743b 6d6f 6475 ces->modu\n-00021440: 6c65 5f73 7263 5f67 726f 6d61 6373 5f64 le_src_gromacs_d\n-00021450: 6f6d 6465 633c 2f74 6974 6c65 3e0a 3c70 omdec..\n-00021560: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....module_\n-00021650: 7372 635f 6772 6f6d 6163 735f 6c69 7374 src_gromacs_list\n-00021660: 6564 5f66 6f72 6365 7326 2334 353b 2667 ed_forces-&g\n-00021670: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-00021680: 6d61 6373 5f6e 626e 786d 3c2f 7469 746c macs_nbnxm</titl\n-00021690: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n-000216a0: 6f6e 6522 2073 7472 6f6b 653d 2272 6564 one\" stroke=\"red\n-000216b0: 2220 643d 224d 3337 342e 3835 2c2d 3136 \" d=\"M374.85,-16\n-000216c0: 332e 3934 4333 3139 2e36 342c 2d31 3736 3.94C319.64,-176\n-000216d0: 2e38 3220 3232 362c 2d32 3038 2e36 3320 .82 226,-208.63 \n-000216e0: 3232 362c 2d32 3739 2e39 3220 3232 362c 226,-279.92 226,\n-000216f0: 2d37 3834 2e38 3820 3232 362c 2d37 3834 -784.88 226,-784\n-00021700: 2e38 3820 3232 362c 2d37 3834 2e38 3820 .88 226,-784.88 \n-00021710: 3232 362c 2d38 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sted_forces-\n-00021800: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00021810: 726f 6d61 6373 5f67 7075 5f75 7469 6c73 romacs_gpu_utils\n-00021820: 202d 2d3e 0a3c 6720 6964 3d22 6564 6765 -->.<g id=\"edge\n-00021830: 3231 3222 2063 6c61 7373 3d22 6564 6765 212\" class=\"edge\n-00021840: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n-00021850: 5f73 7263 5f67 726f 6d61 6373 5f6c 6973 _src_gromacs_lis\n-00021860: 7465 645f 666f 7263 6573 2623 3435 3b26 ted_forces-&\n-00021870: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-00021880: 6f6d 6163 735f 6770 755f 7574 696c 733c omacs_gpu_utils<\n-00021890: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n-000218a0: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n-000218b0: 3d22 7265 6422 2064 3d22 4d33 3634 2e34 =\"red\" d=\"M364.4\n-000218c0: 352c 2d31 3538 2e34 3143 3238 392e 3737 5,-158.41C289.77\n-000218d0: 2c2d 3136 342e 3734 2031 3537 2c2d 3138 ,-164.74 157,-18\n-000218e0: 382e 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6163 735f 6c69 6e65 6172 616c 6765 6272 acs_linearalgebr\n-00021c60: 613c 2f74 6974 6c65 3e0a 3c65 6c6c 6970 a.\n-00021cc0: 0a3c 7465 7874 2074 6578 742d 616e 6368 .linea\n-00021d20: 7261 6c67 6562 7261 3c2f 7465 7874 3e0a ralgebra.\n-00021d30: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...module\n-00021d80: 5f73 7263 5f67 726f 6d61 6373 5f73 696d _src_gromacs_sim\n-00021d90: 643c 2f74 6974 6c65 3e0a 3c67 2069 643d d...simd.<\n-00021eb0: 2f61 3e0a 3c2f 673e 0a3c 2f67 3e0a 3c21 /a>.....m\n-00021f30: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00021f40: 735f 636f 6f72 6469 6e61 7465 696f 2623 s_coordinateio&#\n-00021f50: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-00021f60: 635f 6772 6f6d 6163 735f 6f70 7469 6f6e c_gromacs_option\n-00021f70: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s...<\n-00022140: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module_src_gro\n-000221c0: 6d61 6373 5f67 6d78 7072 6570 726f 6365 macs_gmxpreproce\n-000221d0: 7373 2623 3435 3b26 6774 3b6d 6f64 756c ss->modul\n-000221e0: 655f 7372 635f 6772 6f6d 6163 735f 696d e_src_gromacs_im\n-000221f0: 643c 2f74 6974 6c65 3e0a 3c70 6174 6820 d...\n-00022370: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...m\n-000223e0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-000223f0: 735f 676d 7870 7265 7072 6f63 6573 7326 s_gmxpreprocess&\n-00022400: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-00022410: 7263 5f67 726f 6d61 6373 5f66 6674 3c2f rc_gromacs_fft</\n-00022420: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n-00022430: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n-00022440: 2223 6266 6266 6266 2220 643d 224d 3135 \"#bfbfbf\" d=\"M15\n-00022450: 3539 2e30 392c 2d31 3334 352e 3631 4331 59.09,-1345.61C1\n-00022460: 3630 392e 3132 2c2d 3133 3430 2e39 3520 609.12,-1340.95 \n-00022470: 3136 3833 2e31 362c 2d31 3332 392e 3333 1683.16,-1329.33\n-00022480: 2031 3734 312c 2d31 3330 302e 3237 2031 1741,-1300.27 1\n-00022490: 3735 362e 3939 2c2d 3132 3932 2e32 3420 756.99,-1292.24 \n-000224a0: 3137 3537 2e32 382c 2d31 3238 342e 3839 1757.28,-1284.89\n-000224b0: 2031 3737 312c 2d31 3237 332e 3420 3137 1771,-1273.4 17\n-000224c0: 3930 2e39 2c2d 3132 3536 2e37 3320 3138 90.9,-1256.73 18\n-000224d0: 3032 2e30 352c 2d31 3235 382e 3633 2031 02.05,-1258.63 1\n-000224e0: 3831 372c 2d31 3233 372e 3420 3138 3238 817,-1237.4 1828\n-000224f0: 2e31 352c 2d31 3232 312e 3537 2031 3833 .15,-1221.57 183\n-00022500: 342e 3539 2c2d 3132 3030 2e34 3220 3138 4.59,-1200.42 18\n-00022510: 3338 2e31 342c 2d31 3138 342e 3537 222f 38.14,-1184.57\"/\n-00022520: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n-00022530: 2223 6266 6266 6266 2220 7374 726f 6b65 \"#bfbfbf\" stroke\n-00022540: 3d22 2362 6662 6662 6622 2070 6f69 6e74 =\"#bfbfbf\" point\n-00022550: 733d 2231 3834 312e 3631 2c2d 3131 3835 s=\"1841.61,-1185\n-00022560: 2e30 3620 3138 3430 2e31 352c 2d31 3137 .06 1840.15,-117\n-00022570: 342e 3537 2031 3833 342e 3734 2c2d 3131 4.57 1834.74,-11\n-00022580: 3833 2e36 3820 3138 3431 2e36 312c 2d31 83.68 1841.61,-1\n-00022590: 3138 352e 3036 222f 3e0a 3c2f 673e 0a3c 185.06\"/>.</g>.<\n-000225a0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-000225b0: 726f 6d61 6373 5f67 6d78 7072 6570 726f romacs_gmxprepro\n-000225c0: 6365 7373 2623 3435 3b26 6774 3b6d 6f64 cess->mod\n-000225d0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-000225e0: 676d 786c 6962 202d 2d3e 0a3c 6720 6964 gmxlib -->.<g id\n-000225f0: 3d22 6564 6765 3232 3522 2063 6c61 7373 =\"edge225\" class\n-00022600: 3d22 6564 6765 223e 0a3c 7469 746c 653e =\"edge\">.<title>\n-00022610: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00022620: 6373 5f67 6d78 7072 6570 726f 6365 7373 cs_gmxpreprocess\n-00022630: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n-00022640: 7372 635f 6772 6f6d 6163 735f 676d 786c src_gromacs_gmxl\n-00022650: 6962 3c2f 7469 746c 653e 0a3c 7061 7468 ib.....\n-000227e0: 3c67 2069 643d 2265 6467 6532 3336 2220 .module_src_\n-00022810: 6772 6f6d 6163 735f 676d 7870 7265 7072 gromacs_gmxprepr\n-00022820: 6f63 6573 7326 2334 353b 2667 743b 6d6f ocess->mo\n-00022830: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00022840: 5f6f 7074 696f 6e73 3c2f 7469 746c 653e _options\n-00022850: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ...\n-00022a50: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_grom\n-00022ad0: 6163 735f 676d 7870 7265 7072 6f63 6573 acs_gmxpreproces\n-00022ae0: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n-00022af0: 5f73 7263 5f67 726f 6d61 6373 5f6d 646c _src_gromacs_mdl\n-00022b00: 6962 3c2f 7469 746c 653e 0a3c 7061 7468 ib...\n-00022c40: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_gro\n-00022cc0: 6d61 6373 5f67 6d78 7072 6570 726f 6365 macs_gmxpreproce\n-00022cd0: 7373 2623 3435 3b26 6774 3b6d 6f64 756c ss->modul\n-00022ce0: 655f 7372 635f 6772 6f6d 6163 735f 6669 e_src_gromacs_fi\n-00022cf0: 6c65 696f 3c2f 7469 746c 653e 0a3c 7061 leio...\n-00022ee0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_gr\n-00022f60: 6f6d 6163 735f 676d 7870 7265 7072 6f63 omacs_gmxpreproc\n-00022f70: 6573 7326 2334 353b 2667 743b 6d6f 6475 ess->modu\n-00022f80: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-00022f90: 6474 7970 6573 3c2f 7469 746c 653e 0a3c dtypes.<\n-00022fa0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n-00022fb0: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n-00022fc0: 2220 643d 224d 3135 3337 2e39 372c 2d31 \" d=\"M1537.97,-1\n-00022fd0: 3333 382e 3637 4331 3535 392e 332c 2d31 338.67C1559.3,-1\n-00022fe0: 3333 312e 3035 2031 3538 352e 3835 2c2d 331.05 1585.85,-\n-00022ff0: 3133 3138 2e37 2031 3630 342c 2d31 3330 1318.7 1604,-130\n-00023000: 302e 3237 2031 3632 352e 362c 2d31 3237 0.27 1625.6,-127\n-00023010: 382e 3335 2031 3632 322e 3136 2c2d 3132 8.35 1622.16,-12\n-00023020: 3636 2e32 2031 3633 332c 2d31 3233 372e 66.2 1633,-1237.\n-00023030: 3420 3136 3834 2e33 312c 2d31 3130 312e 4 1684.31,-1101.\n-00023040: 3034 2031 3730 352e 3132 2c2d 3130 3637 04 1705.12,-1067\n-00023050: 2e32 3420 3137 3236 2c2d 3932 332e 3035 .24 1726,-923.05\n-00023060: 2031 3732 382e 3536 2c2d 3930 352e 3338 1728.56,-905.38\n-00023070: 2031 3732 362e 3432 2c2d 3838 352e 3233 1726.42,-885.23\n-00023080: 2031 3732 332e 3836 2c2d 3837 302e 3233 1723.86,-870.23\n-00023090: 222f 3e0a 3c70 6f6c 7967 6f6e 2066 696c \"/>.....mo\n-00023180: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00023190: 5f67 6d78 7072 6570 726f 6365 7373 2623 _gmxpreprocess&#\n-000231a0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-000231b0: 635f 6772 6f6d 6163 735f 646f 6d64 6563 c_gromacs_domdec\n-000231c0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......modu\n-00023440: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n-00023450: 6d78 7072 6570 726f 6365 7373 2623 3435 mxpreprocess-\n-00023460: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00023470: 6772 6f6d 6163 735f 6d64 7275 6e3c 2f74 gromacs_mdrun</t\n-00023480: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-00023490: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-000234a0: 2332 3832 6663 6322 2073 7472 6f6b 652d #282fcc\" stroke-\n-000234b0: 6461 7368 6172 7261 793d 2235 2c32 2220 dasharray=\"5,2\" \n-000234c0: 643d 224d 3134 3639 2e32 392c 2d31 3333 d=\"M1469.29,-133\n-000234d0: 382e 3743 3133 3239 2e36 362c 2d31 3239 8.7C1329.66,-129\n-000234e0: 362e 3237 2038 3034 2c2d 3131 3236 2e33 6.27 804,-1126.3\n-000234f0: 3720 3830 342c 2d39 3733 2e34 3920 3830 7 804,-973.49 80\n-00023500: 342c 2d39 3733 2e34 3920 3830 342c 2d39 4,-973.49 804,-9\n-00023510: 3733 2e34 3920 3830 342c 2d39 3038 2e36 73.49 804,-908.6\n-00023520: 3220 3830 342c 2d37 3132 2e39 3420 3130 2 804,-712.94 10\n-00023530: 3436 2e33 392c 2d38 3139 2e30 3420 3131 46.39,-819.04 11\n-00023540: 3735 2c2d 3637 312e 3537 2031 3330 332e 75,-671.57 1303.\n-00023550: 3431 2c2d 3532 342e 3334 2031 3230 392e 41,-524.34 1209.\n-00023560: 3537 2c2d 3430 352e 3333 2031 3334 382c 57,-405.33 1348,\n-00023570: 2d32 3637 2e34 3820 3133 3638 2e30 352c -267.48 1368.05,\n-00023580: 2d32 3437 2e35 3120 3133 3937 2e37 332c -247.51 1397.73,\n-00023590: 2d32 3335 2e31 3120 3134 3231 2e32 312c -235.11 1421.21,\n-000235a0: 2d32 3237 2e38 3622 2f3e 0a3c 706f 6c79 -227.86\"/>.<poly\n-000235b0: 676f 6e20 6669 6c6c 3d22 2332 3832 6663 gon fill=\"#282fc\n-000235c0: 6322 2073 7472 6f6b 653d 2223 3238 3266 c\" stroke=\"#282f\n-000235d0: 6363 2220 706f 696e 7473 3d22 3134 3232 cc\" points=\"1422\n-000235e0: 2e32 322c 2d32 3331 2e32 3120 3134 3330 .22,-231.21 1430\n-000235f0: 2e38 352c 2d32 3235 2e30 3620 3134 3230 .85,-225.06 1420\n-00023600: 2e32 372c 2d32 3234 2e34 3920 3134 3232 .27,-224.49 1422\n-00023610: 2e32 322c 2d32 3331 2e32 3122 2f3e 0a3c .22,-231.21\"/>.<\n-00023620: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.<!-- module_\n-00023630: 7372 635f 6772 6f6d 6163 735f 676d 7870 src_gromacs_gmxp\n-00023640: 7265 7072 6f63 6573 7326 2334 353b 2667 reprocess-&g\n-00023650: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-00023660: 6d61 6373 5f67 6d78 616e 6120 2d2d 3e0a macs_gmxana -->.\n-00023670: 3c67 2069 643d 2265 6467 6532 3234 2220 <g id=\"edge224\" \n-00023680: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n-00023690: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n-000236a0: 6772 6f6d 6163 735f 676d 7870 7265 7072 gromacs_gmxprepr\n-000236b0: 6f63 6573 7326 2334 353b 2667 743b 6d6f ocess->mo\n-000236c0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-000236d0: 5f67 6d78 616e 613c 2f74 6974 6c65 3e0a _gmxana.\n-000236e0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ..\n-000237c0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_grom\n-00023840: 6163 735f 676d 7870 7265 7072 6f63 6573 acs_gmxpreproces\n-00023850: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n-00023860: 5f73 7263 5f67 726f 6d61 6373 5f6e 626e _src_gromacs_nbn\n-00023870: 786d 3c2f 7469 746c 653e 0a3c 7061 7468 xm..\n-00023950: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....mo\n-00023ca0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00023cb0: 5f67 6d78 7072 6570 726f 6365 7373 2623 _gmxpreprocess&#\n-00023cc0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-00023cd0: 635f 6772 6f6d 6163 735f 6c69 7374 6564 c_gromacs_listed\n-00023ce0: 5f66 6f72 6365 733c 2f74 6974 6c65 3e0a _forces.\n-00023cf0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ...\n-00023e80: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..module_src_grom\n-00023f00: 6163 735f 676d 7870 7265 7072 6f63 6573 acs_gmxpreproces\n-00023f10: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n-00023f20: 5f73 7263 5f67 726f 6d61 6373 5f72 616e _src_gromacs_ran\n-00023f30: 646f 6d3c 2f74 6974 6c65 3e0a 3c70 6174 dom......mo\n-00024190: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-000241a0: 5f67 6d78 7072 6570 726f 6365 7373 2623 _gmxpreprocess&#\n-000241b0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-000241c0: 635f 6772 6f6d 6163 735f 636f 6d6d 616e c_gromacs_comman\n-000241d0: 646c 696e 653c 2f74 6974 6c65 3e0a 3c70 dline...\n-00024380: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...modul\n-000246d0: 655f 7372 635f 6772 6f6d 6163 735f 676d e_src_gromacs_gm\n-000246e0: 7870 7265 7072 6f63 6573 7326 2334 353b xpreprocess-\n-000246f0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00024700: 726f 6d61 6373 5f61 7070 6c69 6564 5f66 romacs_applied_f\n-00024710: 6f72 6365 735f 6177 683c 2f74 6974 6c65 orces_awh</title\n-00024720: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n-00024730: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n-00024740: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n-00024750: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n-00024760: 3134 3434 2e33 312c 2d31 3334 382e 3243 1444.31,-1348.2C\n-00024770: 3131 3938 2e37 322c 2d31 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543.69,-164.66\"\n-00024860: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n-00024870: 3d22 2332 3832 6663 6322 2073 7472 6f6b =\"#282fcc\" strok\n-00024880: 653d 2223 3238 3266 6363 2220 706f 696e e=\"#282fcc\" poin\n-00024890: 7473 3d22 3534 342e 3734 2c2d 3136 3820 ts=\"544.74,-168 \n-000248a0: 3535 332e 3437 2c2d 3136 3220 3534 322e 553.47,-162 542.\n-000248b0: 392c 2d31 3631 2e32 3520 3534 342e 3734 9,-161.25 544.74\n-000248c0: 2c2d 3136 3822 2f3e 0a3c 2f67 3e0a 3c21 ,-168\"/>.</g>.<!\n-000248d0: 2d2d 206d 6f64 756c 655f 7372 635f 6772 -- module_src_gr\n-000248e0: 6f6d 6163 735f 676d 7870 7265 7072 6f63 omacs_gmxpreproc\n-000248f0: 6573 7326 2334 353b 2667 743b 6d6f 6475 ess->modu\n-00024900: 6c65 5f73 7263 5f74 6573 7475 7469 6c73 le_src_testutils\n-00024910: 202d 2d3e 0a3c 6720 6964 3d22 6564 6765 -->.<g id=\"edge\n-00024920: 3233 3722 2063 6c61 7373 3d22 6564 6765 237\" class=\"edge\n-00024930: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n-00024940: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n-00024950: 7072 6570 726f 6365 7373 2623 3435 3b26 preprocess-&\n-00024960: 6774 3b6d 6f64 756c 655f 7372 635f 7465 gt;module_src_te\n-00024970: 7374 7574 696c 733c 2f74 6974 6c65 3e0a stutils.\n-00024980: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .....modu\n-00024b00: 6c65 5f73 7263 5f67 726f 6d61 6373 5f63 le_src_gromacs_c\n-00024b10: 6f6d 6d61 6e64 6c69 6e65 2623 3435 3b26 ommandline-&\n-00024b20: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-00024b30: 6f6d 6163 735f 6f70 7469 6f6e 733c 2f74 omacs_options</t\n-00024b40: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-00024b50: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-00024b60: 2332 3832 6663 6322 2073 7472 6f6b 652d #282fcc\" stroke-\n-00024b70: 6461 7368 6172 7261 793d 2235 2c32 2220 dasharray=\"5,2\" \n-00024b80: 643d 224d 3134 3031 2e32 342c 2d35 3835 d=\"M1401.24,-585\n-00024b90: 2e33 3643 3133 3634 2e35 312c 2d35 3735 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3236 2e37 352c 2d31 3131 2e35 3322 1026.75,-111.53\"\n-00024c90: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />.</g>.<!-- mod\n-00024ca0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00024cb0: 636f 6d6d 616e 646c 696e 6526 2334 353b commandline-\n-00024cc0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00024cd0: 726f 6d61 6373 5f66 696c 6569 6f20 2d2d romacs_fileio --\n-00024ce0: 3e0a 3c67 2069 643d 2265 6467 6532 3430 >.<g id=\"edge240\n-00024cf0: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n-00024d00: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n-00024d10: 635f 6772 6f6d 6163 735f 636f 6d6d 616e c_gromacs_comman\n-00024d20: 646c 696e 6526 2334 353b 2667 743b 6d6f dline->mo\n-00024d30: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00024d40: 5f66 696c 6569 6f3c 2f74 6974 6c65 3e0a _fileio.\n-00024d50: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ..\n-00024e30: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ..<\n-00024e80: 6720 6964 3d22 6564 6765 3233 3822 2063 g id=\"edge238\" c\n-00024e90: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00024eb0: 726f 6d61 6373 5f63 6f6d 6d61 6e64 6c69 romacs_commandli\n-00024ec0: 6e65 2623 3435 3b26 6774 3b6d 6f64 756c ne->modul\n-00024ed0: 655f 7372 635f 6772 6f6d 6163 735f 6f6e e_src_gromacs_on\n-00024ee0: 6c69 6e65 6865 6c70 3c2f 7469 746c 653e linehelp\n-00024ef0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ....\n-00024fd0: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..mo\n-00025040: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00025050: 5f67 7075 5f75 7469 6c73 2623 3435 3b26 _gpu_utils-&\n-00025060: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n-00025070: 6f6d 6163 735f 7574 696c 6974 793c 2f74 omacs_utility</t\n-00025080: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n-00025090: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n-000250a0: 2332 6363 6332 3822 2073 7472 6f6b 652d #2ccc28\" stroke-\n-000250b0: 6461 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5f73 7263 .<!-- module_src\n-00025620: 5f67 726f 6d61 6373 5f67 7075 5f75 7469 _gromacs_gpu_uti\n-00025630: 6c73 2623 3435 3b26 6774 3b6d 6f64 756c ls->modul\n-00025640: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-00025650: 7479 7065 7320 2d2d 3e0a 3c67 2069 643d types -->.<g id=\n-00025660: 2265 6467 6532 3432 2220 636c 6173 733d \"edge242\" class=\n-00025670: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n-00025680: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00025690: 735f 6770 755f 7574 696c 7326 2334 353b s_gpu_utils-\n-000256a0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-000256b0: 726f 6d61 6373 5f6d 6474 7970 6573 3c2f romacs_mdtypes</\n-000256c0: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n-000256d0: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n-000256e0: 2223 6266 6266 6266 2220 643d 224d 3139 \"#bfbfbf\" d=\"M19\n-000256f0: 3131 2e37 392c 2d31 3032 322e 3936 4331 11.79,-1022.96C1\n-00025700: 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mics...<\n-00025b20: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.\n-00025b70: 0a3c 6720 6964 3d22 6564 6765 3235 3222 ..<\n-00025b90: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-00025ba0: 5f67 726f 6d61 6373 5f74 6173 6b61 7373 _gromacs_taskass\n-00025bb0: 6967 6e6d 656e 7426 2334 353b 2667 743b ignment->\n-00025bc0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00025bd0: 6373 5f67 6d78 6c69 623c 2f74 6974 6c65 cs_gmxlib......module_src_grom\n+0001c680: 6163 735f 6577 616c 6426 2334 353b 2667 acs_ewald-&g\n+0001c690: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001c6a0: 6d61 6373 5f6e 626e 786d 3c2f 7469 746c macs_nbnxm..\n+0001c7a0: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 .\n+0001c810: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 ...module_src_grom\n+0001c890: 6163 735f 6577 616c 6426 2334 353b 2667 acs_ewald-&g\n+0001c8a0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001c8b0: 6d61 6373 5f67 7075 5f75 7469 6c73 3c2f macs_gpu_utils...<\n+0001ca80: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>..<\n+0001cad0: 6720 6964 3d22 6564 6765 3138 3422 2063 g id=\"edge184\" c\n+0001cae0: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n+0001cb00: 726f 6d61 6373 5f61 6e61 6c79 7369 7364 romacs_analysisd\n+0001cb10: 6174 6126 2334 353b 2667 743b 6d6f 6475 ata->modu\n+0001cb20: 6c65 5f73 7263 5f67 726f 6d61 6373 5f66 le_src_gromacs_f\n+0001cb30: 696c 6569 6f3c 2f74 6974 6c65 3e0a 3c70 ileio....<\n+0001cc20: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+0001cc30: 726f 6d61 6373 5f6c 6973 7465 645f 666f romacs_listed_fo\n+0001cc40: 7263 6573 2623 3435 3b26 6774 3b6d 6f64 rces->mod\n+0001cc50: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001cc60: 676d 786c 6962 202d 2d3e 0a3c 6720 6964 gmxlib -->..\n+0001cc90: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001cca0: 6373 5f6c 6973 7465 645f 666f 7263 6573 cs_listed_forces\n+0001ccb0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+0001ccc0: 7372 635f 6772 6f6d 6163 735f 676d 786c src_gromacs_gmxl\n+0001ccd0: 6962 3c2f 7469 746c 653e 0a3c 7061 7468 ib...\n+0001cec0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_gro\n+0001cf40: 6d61 6373 5f6c 6973 7465 645f 666f 7263 macs_listed_forc\n+0001cf50: 6573 2623 3435 3b26 6774 3b6d 6f64 756c es->modul\n+0001cf60: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n+0001cf70: 626c 6573 3c2f 7469 746c 653e 0a3c 7061 bles..\n+0001d070: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....module_\n+0001d0f0: 7372 635f 6772 6f6d 6163 735f 6c69 7374 src_gromacs_list\n+0001d100: 6564 5f66 6f72 6365 7326 2334 353b 2667 ed_forces-&g\n+0001d110: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001d120: 6d61 6373 5f68 6172 6477 6172 653c 2f74 macs_hardware</t\n+0001d130: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+0001d140: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n+0001d150: 7265 6422 2064 3d22 4d32 3033 372e 3836 red\" d=\"M2037.86\n+0001d160: 2c2d 3136 382e 3336 4332 3034 352e 322c ,-168.36C2045.2,\n+0001d170: 2d31 3737 2e38 3420 3230 3535 2e30 392c -177.84 2055.09,\n+0001d180: 2d31 3931 2e35 3320 3230 3632 2c2d 3230 -191.53 2062,-20\n+0001d190: 342e 3631 2032 3130 392e 3737 2c2d 3239 4.61 2109.77,-29\n+0001d1a0: 352e 3038 2032 3130 362e 3233 2c2d 3332 5.08 2106.23,-32\n+0001d1b0: 342e 3632 2032 3134 332c 2d34 3230 2e30 4.62 2143,-420.0\n+0001d1c0: 3920 3231 3539 2e39 382c 2d34 3634 2e31 9 2159.98,-464.1\n+0001d1d0: 3720 3231 3731 2e35 332c 2d34 3732 2e39 7 2171.53,-472.9\n+0001d1e0: 2032 3138 322c 2d35 3138 2e39 3620 3232 2182,-518.96 22\n+0001d1f0: 3034 2e35 392c 2d36 3138 2e33 3120 3231 04.59,-618.31 21\n+0001d200: 3938 2e35 352c 2d36 3339 2e31 3720 3231 98.55,-639.17 21\n+0001d210: 3931 2c2d 3637 312e 3537 2032 3137 352e 91,-671.57 2175.\n+0001d220: 3435 2c2d 3733 382e 3235 2032 3135 342e 45,-738.25 2154.\n+0001d230: 3134 2c2d 3735 322e 3933 2032 3130 322c 14,-752.93 2102,\n+0001d240: 2d37 3937 2e33 3120 3137 3935 2e38 322c -797.31 1795.82,\n+0001d250: 2d31 3035 372e 3931 2031 3633 302e 3135 -1057.91 1630.15\n+0001d260: 2c2d 3938 362e 3131 2031 3233 332c 2d31 ,-986.11 1233,-1\n+0001d270: 3034 382e 3739 2031 3134 312e 3533 2c2d 048.79 1141.53,-\n+0001d280: 3130 3633 2e32 3320 3836 372e 3035 2c2d 1063.23 867.05,-\n+0001d290: 3130 3835 2e30 3320 3735 352e 3232 2c2d 1085.03 755.22,-\n+0001d2a0: 3130 3933 2e35 3922 2f3e 0a3c 706f 6c79 1093.59\"/>.<poly\n+0001d2b0: 676f 6e20 6669 6c6c 3d22 7265 6422 2073 gon fill=\"red\" s\n+0001d2c0: 7472 6f6b 653d 2272 6564 2220 706f 696e troke=\"red\" poin\n+0001d2d0: 7473 3d22 3735 342e 3933 2c2d 3130 3930 ts=\"754.93,-1090\n+0001d2e0: 2e31 2037 3435 2e32 332c 2d31 3039 342e .1 745.23,-1094.\n+0001d2f0: 3335 2037 3535 2e34 372c 2d31 3039 372e 35 755.47,-1097.\n+0001d300: 3038 2037 3534 2e39 332c 2d31 3039 302e 08 754.93,-1090.\n+0001d310: 3122 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 1\"/>.</g>.<!-- m\n+0001d320: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001d330: 735f 6c69 7374 6564 5f66 6f72 6365 7326 s_listed_forces&\n+0001d340: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+0001d350: 7263 5f67 726f 6d61 6373 5f6d 646c 6962 rc_gromacs_mdlib\n+0001d360: 202d 2d3e 0a3c 6720 6964 3d22 6564 6765 -->.<g id=\"edge\n+0001d370: 3139 3022 2063 6c61 7373 3d22 6564 6765 190\" class=\"edge\n+0001d380: 223e 0a3c 7469 746c 653e 6d6f 6475 6c65 \">.<title>module\n+0001d390: 5f73 7263 5f67 726f 6d61 6373 5f6c 6973 _src_gromacs_lis\n+0001d3a0: 7465 645f 666f 7263 6573 2623 3435 3b26 ted_forces-&\n+0001d3b0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+0001d3c0: 6f6d 6163 735f 6d64 6c69 623c 2f74 6974 omacs_mdlib</tit\n+0001d3d0: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+0001d3e0: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n+0001d3f0: 6662 6662 6622 2064 3d22 4d32 3034 322e fbfbf\" d=\"M2042.\n+0001d400: 3537 2c2d 3136 382e 3134 4332 3034 392e 57,-168.14C2049.\n+0001d410: 3737 2c2d 3137 372e 3731 2032 3035 372e 77,-177.71 2057.\n+0001d420: 3233 2c2d 3139 312e 3634 2032 3036 322c 23,-191.64 2062,\n+0001d430: 2d32 3034 2e36 3120 3230 3935 2e39 322c -204.61 2095.92,\n+0001d440: 2d32 3936 2e38 3920 3230 3731 2e37 332c -296.89 2071.73,\n+0001d450: 2d33 3330 2e34 2032 3131 322c 2d34 3230 -330.4 2112,-420\n+0001d460: 2e30 3920 3231 3334 2e30 352c 2d34 3639 .09 2134.05,-469\n+0001d470: 2e32 3120 3231 3635 2e36 382c 2d34 3637 .21 2165.68,-467\n+0001d480: 2e36 3520 3231 3832 2c2d 3531 382e 3936 .65 2182,-518.96\n+0001d490: 2032 3139 342e 3039 2c2d 3535 362e 3937 2194.09,-556.97\n+0001d4a0: 2032 3230 322e 3635 2c2d 3537 342e 3538 2202.65,-574.58\n+0001d4b0: 2032 3138 322c 2d36 3038 2e37 2032 3131 2182,-608.7 211\n+0001d4c0: 392e 3637 2c2d 3731 312e 3733 2032 3035 9.67,-711.73 205\n+0001d4d0: 372e 3836 2c2d 3730 312e 3632 2031 3934 7.86,-701.62 194\n+0001d4e0: 322c 2d37 3334 2e34 3420 3138 3135 2e37 2,-734.44 1815.7\n+0001d4f0: 392c 2d37 3730 2e32 2031 3430 342e 3533 9,-770.2 1404.53\n+0001d500: 2c2d 3738 302e 3133 2031 3237 362e 3338 ,-780.13 1276.38\n+0001d510: 2c2d 3738 322e 3333 222f 3e0a 3c70 6f6c ,-782.33\"/>.<pol\n+0001d520: 7967 6f6e 2066 696c 6c3d 2223 6266 6266 ygon fill=\"#bfbf\n+0001d530: 6266 2220 7374 726f 6b65 3d22 2362 6662 bf\" stroke=\"#bfb\n+0001d540: 6662 6622 2070 6f69 6e74 733d 2231 3237 fbf\" points=\"127\n+0001d550: 362e 3139 2c2d 3737 382e 3834 2031 3236 6.19,-778.84 126\n+0001d560: 362e 3235 2c2d 3738 322e 3520 3132 3736 6.25,-782.5 1276\n+0001d570: 2e33 312c 2d37 3835 2e38 3420 3132 3736 .31,-785.84 1276\n+0001d580: 2e31 392c 2d37 3738 2e38 3422 2f3e 0a3c .19,-778.84\"/>.<\n+0001d590: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>.<!-- module_\n+0001d5a0: 7372 635f 6772 6f6d 6163 735f 6c69 7374 src_gromacs_list\n+0001d5b0: 6564 5f66 6f72 6365 7326 2334 353b 2667 ed_forces-&g\n+0001d5c0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001d5d0: 6d61 6373 5f6d 6474 7970 6573 202d 2d3e macs_mdtypes -->\n+0001d5e0: 0a3c 6720 6964 3d22 6564 6765 3138 3622 .<g id=\"edge186\"\n+0001d5f0: 2063 6c61 7373 3d22 6564 6765 223e 0a3c class=\"edge\">.<\n+0001d600: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+0001d610: 5f67 726f 6d61 6373 5f6c 6973 7465 645f _gromacs_listed_\n+0001d620: 666f 7263 6573 2623 3435 3b26 6774 3b6d forces->m\n+0001d630: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001d640: 735f 6d64 7479 7065 733c 2f74 6974 6c65 s_mdtypes</title\n+0001d650: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+0001d660: 6e65 2220 7374 726f 6b65 3d22 7265 6422 ne\" stroke=\"red\"\n+0001d670: 2064 3d22 4d32 3032 312e 3033 2c2d 3136 d=\"M2021.03,-16\n+0001d680: 382e 3734 4332 3030 392e 3537 2c2d 3139 8.74C2009.57,-19\n+0001d690: 302e 3633 2031 3938 382c 2d32 3337 2e34 0.63 1988,-237.4\n+0001d6a0: 3720 3139 3838 2c2d 3237 392e 3932 2031 7 1988,-279.92 1\n+0001d6b0: 3938 382c 2d33 3434 2e37 3920 3139 3838 988,-344.79 1988\n+0001d6c0: 2c2d 3334 342e 3739 2031 3938 382c 2d33 ,-344.79 1988,-3\n+0001d6d0: 3434 2e37 3920 3139 3838 2c2d 3433 362e 44.79 1988,-436.\n+0001d6e0: 3635 2031 3937 332e 3136 2c2d 3437 382e 65 1973.16,-478.\n+0001d6f0: 3832 2032 3033 362c 2d35 3435 2e38 3320 82 2036,-545.83 \n+0001d700: 3230 3733 2e32 322c 2d35 3835 2e35 3120 2073.22,-585.51 \n+0001d710: 3231 3230 2e36 382c 2d35 3338 2e30 3720 2120.68,-538.07 \n+0001d720: 3231 3533 2c2d 3538 312e 3833 2032 3232 2153,-581.83 222\n+0001d730: 372e 3134 2c2d 3638 322e 3231 2032 3038 7.14,-682.21 208\n+0001d740: 362e 3432 2c2d 3734 352e 3237 2031 3937 6.42,-745.27 197\n+0001d750: 332c 2d37 3937 2e33 3120 3138 3931 2e38 3,-797.31 1891.8\n+0001d760: 312c 2d38 3334 2e35 3620 3132 3632 2e39 1,-834.56 1262.9\n+0001d770: 372c 2d38 3433 2e35 3220 3130 3832 2e33 7,-843.52 1082.3\n+0001d780: 362c 2d38 3435 2e33 3422 2f3e 0a3c 706f 6,-845.34\"/>.<po\n+0001d790: 6c79 676f 6e20 6669 6c6c 3d22 7265 6422 lygon fill=\"red\"\n+0001d7a0: 2073 7472 6f6b 653d 2272 6564 2220 706f stroke=\"red\" po\n+0001d7b0: 696e 7473 3d22 3130 3832 2e30 372c 2d38 ints=\"1082.07,-8\n+0001d7c0: 3431 2e38 3420 3130 3732 2e31 312c 2d38 41.84 1072.11,-8\n+0001d7d0: 3435 2e34 3420 3130 3832 2e31 342c 2d38 45.44 1082.14,-8\n+0001d7e0: 3438 2e38 3420 3130 3832 2e30 372c 2d38 48.84 1082.07,-8\n+0001d7f0: 3431 2e38 3422 2f3e 0a3c 2f67 3e0a 3c21 41.84\"/>.</g>.<!\n+0001d800: 2d2d 206d 6f64 756c 655f 7372 635f 6772 -- module_src_gr\n+0001d810: 6f6d 6163 735f 6c69 7374 6564 5f66 6f72 omacs_listed_for\n+0001d820: 6365 7326 2334 353b 2667 743b 6d6f 6475 ces->modu\n+0001d830: 6c65 5f73 7263 5f67 726f 6d61 6373 5f64 le_src_gromacs_d\n+0001d840: 6f6d 6465 6320 2d2d 3e0a 3c67 2069 643d omdec -->.<g id=\n+0001d850: 2265 6467 6531 3932 2220 636c 6173 733d \"edge192\" class=\n+0001d860: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+0001d870: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001d880: 735f 6c69 7374 6564 5f66 6f72 6365 7326 s_listed_forces&\n+0001d890: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+0001d8a0: 7263 5f67 726f 6d61 6373 5f64 6f6d 6465 rc_gromacs_domde\n+0001d8b0: 633c 2f74 6974 6c65 3e0a 3c70 6174 6820 c......mo\n+0001da20: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0001da30: 5f6c 6973 7465 645f 666f 7263 6573 2623 _listed_forces&#\n+0001da40: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+0001da50: 635f 6772 6f6d 6163 735f 6e62 6e78 6d3c c_gromacs_nbnxm<\n+0001da60: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+0001da70: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+0001da80: 3d22 7265 6422 2064 3d22 4d32 3033 332e =\"red\" d=\"M2033.\n+0001da90: 3338 2c2d 3136 382e 3832 4332 3033 372c 38,-168.82C2037,\n+0001daa0: 2d31 3931 2e32 3220 3230 3337 2c2d 3233 -191.22 2037,-23\n+0001dab0: 392e 3331 2032 3033 372c 2d32 3739 2e39 9.31 2037,-279.9\n+0001dac0: 3220 3230 3337 2c2d 3334 342e 3739 2032 2 2037,-344.79 2\n+0001dad0: 3033 372c 2d33 3434 2e37 3920 3230 3337 037,-344.79 2037\n+0001dae0: 2c2d 3334 342e 3739 2032 3033 372c 2d34 ,-344.79 2037,-4\n+0001daf0: 3130 2e38 3820 3230 3433 2e38 362c 2d34 10.88 2043.86,-4\n+0001db00: 3337 2e36 3720 3230 3932 2c2d 3438 322e 37.67 2092,-482.\n+0001db10: 3936 2032 3131 362e 3035 2c2d 3530 352e 96 2116.05,-505.\n+0001db20: 3539 2032 3133 362e 3633 2c2d 3439 322e 59 2136.63,-492.\n+0001db30: 3936 2032 3135 372c 2d35 3138 2e39 3620 96 2157,-518.96 \n+0001db40: 3231 3939 2e33 392c 2d35 3733 2e30 3720 2199.39,-573.07 \n+0001db50: 3232 3132 2e36 382c 2d36 3130 2e30 3720 2212.68,-610.07 \n+0001db60: 3231 3832 2c2d 3637 312e 3537 2032 3134 2182,-671.57 214\n+0001db70: 302e 3533 2c2d 3735 342e 3731 2032 3130 0.53,-754.71 210\n+0001db80: 302e 3032 2c2d 3735 392e 3835 2032 3031 0.02,-759.85 201\n+0001db90: 352c 2d37 3937 2e33 3120 3137 3336 2e35 5,-797.31 1736.5\n+0001dba0: 352c 2d39 3230 2e30 3120 3136 3433 2e36 5,-920.01 1643.6\n+0001dbb0: 362c 2d38 3833 2e31 3820 3133 3432 2c2d 6,-883.18 1342,-\n+0001dbc0: 3932 332e 3035 2031 3132 332e 3139 2c2d 923.05 1123.19,-\n+0001dbd0: 3935 312e 3937 2038 3538 2e34 322c 2d39 951.97 858.42,-9\n+0001dbe0: 3635 2e36 3120 3735 362e 3537 2c2d 3936 65.61 756.57,-96\n+0001dbf0: 392e 3932 222f 3e0a 3c70 6f6c 7967 6f6e 9.92\"/>.<polygon\n+0001dc00: 2066 696c 6c3d 2272 6564 2220 7374 726f fill=\"red\" stro\n+0001dc10: 6b65 3d22 7265 6422 2070 6f69 6e74 733d ke=\"red\" points=\n+0001dc20: 2237 3536 2e32 332c 2d39 3636 2e34 3320 \"756.23,-966.43 \n+0001dc30: 3734 362e 3338 2c2d 3937 302e 3334 2037 746.38,-970.34 7\n+0001dc40: 3536 2e35 322c 2d39 3733 2e34 3220 3735 56.52,-973.42 75\n+0001dc50: 362e 3233 2c2d 3936 362e 3433 222f 3e0a 6.23,-966.43\"/>.\n+0001dc60: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+0001dc70: 5f73 7263 5f67 726f 6d61 6373 5f6c 6973 _src_gromacs_lis\n+0001dc80: 7465 645f 666f 7263 6573 2623 3435 3b26 ted_forces-&\n+0001dc90: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+0001dca0: 6f6d 6163 735f 6770 755f 7574 696c 7320 omacs_gpu_utils \n+0001dcb0: 2d2d 3e0a 3c67 2069 643d 2265 6467 6531 -->.<g id=\"edge1\n+0001dcc0: 3837 2220 636c 6173 733d 2265 6467 6522 87\" class=\"edge\"\n+0001dcd0: 3e0a 3c74 6974 6c65 3e6d 6f64 756c 655f >.<title>module_\n+0001dce0: 7372 635f 6772 6f6d 6163 735f 6c69 7374 src_gromacs_list\n+0001dcf0: 6564 5f66 6f72 6365 7326 2334 353b 2667 ed_forces-&g\n+0001dd00: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001dd10: 6d61 6373 5f67 7075 5f75 7469 6c73 3c2f macs_gpu_utils</\n+0001dd20: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+0001dd30: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+0001dd40: 2272 6564 2220 643d 224d 3230 3331 2e33 \"red\" d=\"M2031.3\n+0001dd50: 392c 2d31 3638 2e37 3143 3230 3337 2e31 9,-168.71C2037.1\n+0001dd60: 2c2d 3139 302e 3934 2032 3034 382c 2d32 ,-190.94 2048,-2\n+0001dd70: 3338 2e37 3920 3230 3438 2c2d 3237 392e 38.79 2048,-279.\n+0001dd80: 3932 2032 3034 382c 2d33 3434 2e37 3920 92 2048,-344.79 \n+0001dd90: 3230 3438 2c2d 3334 342e 3739 2032 3034 2048,-344.79 204\n+0001dda0: 382c 2d33 3434 2e37 3920 3230 3438 2c2d 8,-344.79 2048,-\n+0001ddb0: 3338 322e 3638 2032 3036 392e 3839 2c2d 382.68 2069.89,-\n+0001ddc0: 3338 362e 3820 3230 3838 2c2d 3432 302e 386.8 2088,-420.\n+0001ddd0: 3039 2032 3130 332e 3238 2c2d 3434 382e 09 2103.28,-448.\n+0001dde0: 3138 2032 3130 332e 3232 2c2d 3435 372e 18 2103.22,-457.\n+0001ddf0: 3833 2032 3132 332c 2d34 3832 2e39 3620 83 2123,-482.96 \n+0001de00: 3231 3337 2e35 392c 2d35 3031 2e35 2032 2137.59,-501.5 2\n+0001de10: 3134 382c 2d34 3939 2e39 3720 3231 3632 148,-499.97 2162\n+0001de20: 2c2d 3531 382e 3936 2032 3138 302e 3337 ,-518.96 2180.37\n+0001de30: 2c2d 3534 332e 3838 2032 3138 352e 3136 ,-543.88 2185.16\n+0001de40: 2c2d 3535 312e 3633 2032 3139 322c 2d35 ,-551.63 2192,-5\n+0001de50: 3831 2e38 3320 3231 3934 2e36 342c 2d35 81.83 2194.64,-5\n+0001de60: 3933 2e34 3820 3231 3932 2e38 352c 2d35 93.48 2192.85,-5\n+0001de70: 3936 2e37 3920 3231 3932 2c2d 3630 382e 96.79 2192,-608.\n+0001de80: 3720 3231 3837 2e37 362c 2d36 3638 2e32 7 2187.76,-668.2\n+0001de90: 3120 3231 3835 2e33 2c2d 3639 302e 3435 1 2185.3,-690.45\n+0001dea0: 2032 3134 352c 2d37 3334 2e34 3420 3230 2145,-734.44 20\n+0001deb0: 3831 2e30 342c 2d38 3034 2e32 3720 3230 81.04,-804.27 20\n+0001dec0: 3630 2e38 332c 2d38 3234 2e38 2031 3937 60.83,-824.8 197\n+0001ded0: 332c 2d38 3630 2e31 3820 3137 3430 2e35 3,-860.18 1740.5\n+0001dee0: 2c2d 3935 332e 3834 2039 3430 2e36 362c ,-953.84 940.66,\n+0001def0: 2d31 3031 362e 3237 2037 3335 2e33 342c -1016.27 735.34,\n+0001df00: 2d31 3033 3122 2f3e 0a3c 706f 6c79 676f -1031\"/>.<polygo\n+0001df10: 6e20 6669 6c6c 3d22 7265 6422 2073 7472 n fill=\"red\" str\n+0001df20: 6f6b 653d 2272 6564 2220 706f 696e 7473 oke=\"red\" points\n+0001df30: 3d22 3733 342e 392c 2d31 3032 372e 3532 =\"734.9,-1027.52\n+0001df40: 2037 3235 2e31 382c 2d31 3033 312e 3733 725.18,-1031.73\n+0001df50: 2037 3335 2e34 2c2d 3130 3334 2e35 3120 735.4,-1034.51 \n+0001df60: 3733 342e 392c 2d31 3032 372e 3532 222f 734.9,-1027.52\"/\n+0001df70: 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f 6475 >.</g>.<!-- modu\n+0001df80: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6c le_src_gromacs_l\n+0001df90: 6973 7465 645f 666f 7263 6573 2623 3435 isted_forces-\n+0001dfa0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+0001dfb0: 6772 6f6d 6163 735f 6d64 7275 6e75 7469 gromacs_mdrunuti\n+0001dfc0: 6c69 7479 202d 2d3e 0a3c 6720 6964 3d22 lity -->.<g id=\"\n+0001dfd0: 6564 6765 3138 3822 2063 6c61 7373 3d22 edge188\" class=\"\n+0001dfe0: 6564 6765 223e 0a3c 7469 746c 653e 6d6f edge\">.<title>mo\n+0001dff0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0001e000: 5f6c 6973 7465 645f 666f 7263 6573 2623 _listed_forces&#\n+0001e010: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+0001e020: 635f 6772 6f6d 6163 735f 6d64 7275 6e75 c_gromacs_mdrunu\n+0001e030: 7469 6c69 7479 3c2f 7469 746c 653e 0a3c tility.<\n+0001e040: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+0001e050: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n+0001e060: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n+0001e070: 6179 3d22 352c 3222 2064 3d22 4d32 3032 ay=\"5,2\" d=\"M202\n+0001e080: 342e 3631 2c2d 3136 382e 3731 4332 3031 4.61,-168.71C201\n+0001e090: 382e 392c 2d31 3930 2e39 3420 3230 3038 8.9,-190.94 2008\n+0001e0a0: 2c2d 3233 382e 3739 2032 3030 382c 2d32 ,-238.79 2008,-2\n+0001e0b0: 3739 2e39 3220 3230 3038 2c2d 3334 342e 79.92 2008,-344.\n+0001e0c0: 3739 2032 3030 382c 2d33 3434 2e37 3920 79 2008,-344.79 \n+0001e0d0: 3230 3038 2c2d 3334 342e 3739 2032 3030 2008,-344.79 200\n+0001e0e0: 382c 2d34 3130 2e38 3820 3230 3133 2e35 8,-410.88 2013.5\n+0001e0f0: 362c 2d34 3339 2e30 3920 3230 3633 2c2d 6,-439.09 2063,-\n+0001e100: 3438 322e 3936 2032 3038 382e 3237 2c2d 482.96 2088.27,-\n+0001e110: 3530 352e 3339 2032 3138 312e 3934 2c2d 505.39 2181.94,-\n+0001e120: 3439 372e 3435 2032 3133 382c 2d35 3435 497.45 2138,-545\n+0001e130: 2e38 3320 3230 3832 2e30 322c 2d36 3037 .83 2082.02,-607\n+0001e140: 2e34 3820 3138 3436 2e31 392c 2d35 3633 .48 1846.19,-563\n+0001e150: 2e33 2031 3736 352c 2d35 3831 2e38 3320 .3 1765,-581.83 \n+0001e160: 3137 3331 2e32 392c 2d35 3839 2e35 3320 1731.29,-589.53 \n+0001e170: 3137 3235 2e37 392c 2d36 3031 2e34 3120 1725.79,-601.41 \n+0001e180: 3136 3932 2c2d 3630 382e 3720 3135 3735 1692,-608.7 1575\n+0001e190: 2e38 312c 2d36 3333 2e37 3720 3132 3139 .81,-633.77 1219\n+0001e1a0: 2e35 322c 2d36 3439 2e36 3620 3130 3739 .52,-649.66 1079\n+0001e1b0: 2e39 332c 2d36 3535 2e30 3622 2f3e 0a3c .93,-655.06\"/>.<\n+0001e1c0: 706f 6c79 676f 6e20 6669 6c6c 3d22 2332 polygon fill=\"#2\n+0001e1d0: 3832 6663 6322 2073 7472 6f6b 653d 2223 82fcc\" stroke=\"#\n+0001e1e0: 3238 3266 6363 2220 706f 696e 7473 3d22 282fcc\" points=\"\n+0001e1f0: 3130 3739 2e37 332c 2d36 3531 2e35 3720 1079.73,-651.57 \n+0001e200: 3130 3639 2e38 372c 2d36 3535 2e34 3520 1069.87,-655.45 \n+0001e210: 3130 3739 2e39 392c 2d36 3538 2e35 3620 1079.99,-658.56 \n+0001e220: 3130 3739 2e37 332c 2d36 3531 2e35 3722 1079.73,-651.57\"\n+0001e230: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />....\n+0001e3e0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001e3f0: 6373 5f6d 6472 756e 2623 3435 3b26 6774 cs_mdrun->\n+0001e400: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+0001e410: 6163 735f 696d 643c 2f74 6974 6c65 3e0a acs_imd.\n+0001e420: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .\n+0001e5d0: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....mod\n+0001e6c0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001e6d0: 6d64 7275 6e26 2334 353b 2667 743b 6d6f mdrun->mo\n+0001e6e0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0001e6f0: 5f65 7373 656e 7469 616c 6479 6e61 6d69 _essentialdynami\n+0001e700: 6373 3c2f 7469 746c 653e 0a3c 7061 7468 cs.\n+0001e7b0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .\n+0001e820: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....mod\n+0001e890: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001e8a0: 6d64 7275 6e26 2334 353b 2667 743b 6d6f mdrun->mo\n+0001e8b0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0001e8c0: 5f73 7761 703c 2f74 6974 6c65 3e0a 3c70 _swap......\n+0001ea20: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+0001ea30: 635f 6772 6f6d 6163 735f 6d64 7275 6e26 c_gromacs_mdrun&\n+0001ea40: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+0001ea50: 7263 5f67 726f 6d61 6373 5f67 6d78 6c69 rc_gromacs_gmxli\n+0001ea60: 623c 2f74 6974 6c65 3e0a 3c70 6174 6820 b.....<\n+0001ec20: 6720 6964 3d22 6564 6765 3231 3622 2063 g id=\"edge216\" c\n+0001ec30: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n+0001ec50: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n+0001ec60: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+0001ec70: 6772 6f6d 6163 735f 6d69 6d69 633c 2f74 gromacs_mimic...<\n+0001ed60: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...m\n+0001edd0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001ede0: 735f 6d64 7275 6e26 2334 353b 2667 743b s_mdrun->\n+0001edf0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001ee00: 6373 5f68 6172 6477 6172 653c 2f74 6974 cs_hardware</tit\n+0001ee10: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+0001ee20: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n+0001ee30: 6662 6662 6622 2064 3d22 4d39 3334 2e34 fbfbf\" d=\"M934.4\n+0001ee40: 332c 2d32 3230 2e36 3743 3831 372e 3134 3,-220.67C817.14\n+0001ee50: 2c2d 3232 372e 3032 2034 3031 2e34 322c ,-227.02 401.42,\n+0001ee60: 2d32 3530 2e36 3420 3337 392c 2d32 3637 -250.64 379,-267\n+0001ee70: 2e34 3820 3332 372e 3638 2c2d 3330 362e .48 327.68,-306.\n+0001ee80: 3033 2033 3337 2c2d 3334 312e 3437 2033 03 337,-341.47 3\n+0001ee90: 3337 2c2d 3430 352e 3636 2033 3337 2c2d 37,-405.66 337,-\n+0001eea0: 3533 332e 3420 3333 372c 2d35 3333 2e34 533.4 337,-533.4\n+0001eeb0: 2033 3337 2c2d 3533 332e 3420 3333 372c 337,-533.4 337,\n+0001eec0: 2d31 3137 372e 3934 2032 3832 2e30 362c -1177.94 282.06,\n+0001eed0: 2d39 3638 2e36 3620 3338 352c 2d31 3034 -968.66 385,-104\n+0001eee0: 382e 3739 2034 3333 2e34 362c 2d31 3038 8.79 433.46,-108\n+0001eef0: 362e 3532 2035 3938 2e37 322c 2d31 3037 6.52 598.72,-107\n+0001ef00: 332e 3037 2036 3539 2c2d 3130 3834 2e37 3.07 659,-1084.7\n+0001ef10: 3920 3636 312e 3939 2c2d 3130 3835 2e33 9 661.99,-1085.3\n+0001ef20: 3720 3636 352e 3037 2c2d 3130 3836 2e30 7 665.07,-1086.0\n+0001ef30: 3320 3636 382e 3135 2c2d 3130 3836 2e37 3 668.15,-1086.7\n+0001ef40: 3322 2f3e 0a3c 706f 6c79 676f 6e20 6669 3\"/>.<polygon fi\n+0001ef50: 6c6c 3d22 2362 6662 6662 6622 2073 7472 ll=\"#bfbfbf\" str\n+0001ef60: 6f6b 653d 2223 6266 6266 6266 2220 706f oke=\"#bfbfbf\" po\n+0001ef70: 696e 7473 3d22 3636 372e 342c 2d31 3039 ints=\"667.4,-109\n+0001ef80: 302e 3135 2036 3737 2e39 342c 2d31 3038 0.15 677.94,-108\n+0001ef90: 392e 3039 2036 3639 2e30 342c 2d31 3038 9.09 669.04,-108\n+0001efa0: 332e 3334 2036 3637 2e34 2c2d 3130 3930 3.34 667.4,-1090\n+0001efb0: 2e31 3522 2f3e 0a3c 2f67 3e0a 3c21 2d2d .15\"/>.</g>.<!--\n+0001efc0: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+0001efd0: 6163 735f 6d64 7275 6e26 2334 353b 2667 acs_mdrun-&g\n+0001efe0: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001eff0: 6d61 6373 5f6d 6f64 756c 6172 7369 6d75 macs_modularsimu\n+0001f000: 6c61 746f 7220 2d2d 3e0a 3c67 2069 643d lator -->.<g id=\n+0001f010: 2265 6467 6532 3036 2220 636c 6173 733d \"edge206\" class=\n+0001f020: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+0001f030: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001f040: 735f 6d64 7275 6e26 2334 353b 2667 743b s_mdrun->\n+0001f050: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001f060: 6373 5f6d 6f64 756c 6172 7369 6d75 6c61 cs_modularsimula\n+0001f070: 746f 723c 2f74 6974 6c65 3e0a 3c70 6174 tor......\n+0001f1b0: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+0001f1c0: 635f 6772 6f6d 6163 735f 6d64 7275 6e26 c_gromacs_mdrun&\n+0001f1d0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+0001f1e0: 7263 5f67 726f 6d61 6373 5f70 756c 6c69 rc_gromacs_pulli\n+0001f1f0: 6e67 3c2f 7469 746c 653e 0a3c 7061 7468 ng......modu\n+0001f360: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+0001f370: 6472 756e 2623 3435 3b26 6774 3b6d 6f64 drun->mod\n+0001f380: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001f390: 6f70 7469 6f6e 733c 2f74 6974 6c65 3e0a options.\n+0001f3a0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ...\n+0001f4c0: 3c21 2d2d 206d 6f64 756c 655f 7372 635f ..\n+0001f700: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001f710: 6373 5f6d 6472 756e 2623 3435 3b26 6774 cs_mdrun->\n+0001f720: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+0001f730: 6163 735f 6669 6c65 696f 3c2f 7469 746c acs_fileio</titl\n+0001f740: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0001f750: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+0001f760: 6266 6266 2220 643d 224d 3938 342e 3035 bfbf\" d=\"M984.05\n+0001f770: 2c2d 3232 382e 3835 4331 3030 312e 362c ,-228.85C1001.6,\n+0001f780: 2d32 3338 2e31 3320 3130 3238 2e31 352c -238.13 1028.15,\n+0001f790: 2d32 3532 2e37 3920 3130 3530 2c2d 3236 -252.79 1050,-26\n+0001f7a0: 372e 3438 2031 3132 352e 3035 2c2d 3331 7.48 1125.05,-31\n+0001f7b0: 372e 3935 2031 3133 392e 342c 2d33 3336 7.95 1139.4,-336\n+0001f7c0: 2e36 3920 3132 3130 2c2d 3339 332e 3232 .69 1210,-393.22\n+0001f7d0: 2031 3235 392e 3235 2c2d 3433 322e 3636 1259.25,-432.66\n+0001f7e0: 2031 3236 342e 3637 2c2d 3435 322e 3634 1264.67,-452.64\n+0001f7f0: 2031 3332 302c 2d34 3832 2e39 3620 3133 1320,-482.96 13\n+0001f800: 3536 2e33 312c 2d35 3032 2e38 3620 3134 56.31,-502.86 14\n+0001f810: 3032 2e31 362c 2d35 3136 2e33 3520 3134 02.16,-516.35 14\n+0001f820: 3332 2e39 322c 2d35 3233 2e39 3422 2f3e 32.92,-523.94\"/>\n+0001f830: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .<polygon fill=\"\n+0001f840: 2362 6662 6662 6622 2073 7472 6f6b 653d #bfbfbf\" stroke=\n+0001f850: 2223 6266 6266 6266 2220 706f 696e 7473 \"#bfbfbf\" points\n+0001f860: 3d22 3134 3332 2e31 392c 2d35 3237 2e33 =\"1432.19,-527.3\n+0001f870: 3620 3134 3432 2e37 332c 2d35 3236 2e32 6 1442.73,-526.2\n+0001f880: 3920 3134 3333 2e38 322c 2d35 3230 2e35 9 1433.82,-520.5\n+0001f890: 3620 3134 3332 2e31 392c 2d35 3237 2e33 6 1432.19,-527.3\n+0001f8a0: 3622 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6\"/>.</g>.<!-- m\n+0001f8b0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001f8c0: 735f 6d64 7275 6e26 2334 353b 2667 743b s_mdrun->\n+0001f8d0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+0001f8e0: 6373 5f6d 6474 7970 6573 202d 2d3e 0a3c cs_mdtypes -->.<\n+0001f8f0: 6720 6964 3d22 6564 6765 3139 3822 2063 g id=\"edge198\" c\n+0001f900: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.<ti\n+0001f910: 746c 653e 6d6f 6475 6c65 5f73 7263 5f67 tle>module_src_g\n+0001f920: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n+0001f930: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+0001f940: 6772 6f6d 6163 735f 6d64 7479 7065 733c gromacs_mdtypes<\n+0001f950: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+0001f960: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+0001f970: 3d22 7265 6422 2064 3d22 4d39 3334 2e31 =\"red\" d=\"M934.1\n+0001f980: 332c 2d32 3230 2e35 3543 3833 382e 3238 3,-220.55C838.28\n+0001f990: 2c2d 3232 352e 3438 2035 3530 2e31 362c ,-225.48 550.16,\n+0001f9a0: 2d32 3432 2e32 3720 3531 372c 2d32 3637 -242.27 517,-267\n+0001f9b0: 2e34 3820 3432 322e 3536 2c2d 3333 392e .48 422.56,-339.\n+0001f9c0: 3238 2034 3737 2c2d 3431 322e 3736 2034 28 477,-412.76 4\n+0001f9d0: 3737 2c2d 3533 312e 3420 3437 372c 2d37 77,-531.4 477,-7\n+0001f9e0: 3232 2e30 3120 3437 372c 2d37 3232 2e30 22.01 477,-722.0\n+0001f9f0: 3120 3437 372c 2d37 3232 2e30 3120 3437 1 477,-722.01 47\n+0001fa00: 372c 2d38 3235 2e37 3920 3835 302e 3138 7,-825.79 850.18\n+0001fa10: 2c2d 3834 322e 3538 2039 3835 2e36 322c ,-842.58 985.62,\n+0001fa20: 2d38 3435 2e32 3522 2f3e 0a3c 706f 6c79 -845.25\"/>.<poly\n+0001fa30: 676f 6e20 6669 6c6c 3d22 7265 6422 2073 gon fill=\"red\" s\n+0001fa40: 7472 6f6b 653d 2272 6564 2220 706f 696e troke=\"red\" poin\n+0001fa50: 7473 3d22 3938 352e 3635 2c2d 3834 382e ts=\"985.65,-848.\n+0001fa60: 3735 2039 3935 2e37 322c 2d38 3435 2e34 75 995.72,-845.4\n+0001fa70: 3320 3938 352e 3738 2c2d 3834 312e 3736 3 985.78,-841.76\n+0001fa80: 2039 3835 2e36 352c 2d38 3438 2e37 3522 985.65,-848.75\"\n+0001fa90: 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 />.</g>.<!-- mod\n+0001faa0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001fab0: 6d64 7275 6e26 2334 353b 2667 743b 6d6f mdrun->mo\n+0001fac0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0001fad0: 5f64 6f6d 6465 6320 2d2d 3e0a 3c67 2069 _domdec -->.<g i\n+0001fae0: 643d 2265 6467 6531 3936 2220 636c 6173 d=\"edge196\" clas\n+0001faf0: 733d 2265 6467 6522 3e0a 3c74 6974 6c65 s=\"edge\">.<title\n+0001fb00: 3e6d 6f64 756c 655f 7372 635f 6772 6f6d >module_src_grom\n+0001fb10: 6163 735f 6d64 7275 6e26 2334 353b 2667 acs_mdrun-&g\n+0001fb20: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001fb30: 6d61 6373 5f64 6f6d 6465 633c 2f74 6974 macs_domdec</tit\n+0001fb40: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+0001fb50: 6e6f 6e65 2220 7374 726f 6b65 3d22 2332 none\" stroke=\"#2\n+0001fb60: 3832 6663 6322 2064 3d22 4d39 3336 2e39 82fcc\" d=\"M936.9\n+0001fb70: 2c2d 3232 332e 3837 4338 3637 2e34 362c ,-223.87C867.46,\n+0001fb80: 2d32 3334 2e39 3320 3638 382e 312c 2d32 -234.93 688.1,-2\n+0001fb90: 3632 2e30 3320 3630 352e 3133 2c2d 3237 62.03 605.13,-27\n+0001fba0: 342e 3033 222f 3e0a 3c70 6f6c 7967 6f6e 4.03\"/>.<polygon\n+0001fbb0: 2066 696c 6c3d 2223 3238 3266 6363 2220 fill=\"#282fcc\" 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3b26 6774 3b6d 6f64 drun->mod\n+0001fcb0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+0001fcc0: 6170 706c 6965 645f 666f 7263 6573 3c2f applied_forces</\n+0001fcd0: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+0001fce0: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+0001fcf0: 2272 6564 2220 643d 224d 3939 322e 352c \"red\" d=\"M992.5,\n+0001fd00: 2d32 3131 2e34 3943 3130 3035 2e33 362c -211.49C1005.36,\n+0001fd10: 2d32 3039 2e30 3720 3130 3230 2e39 322c -209.07 1020.92,\n+0001fd20: 2d32 3036 2e33 3820 3130 3335 2c2d 3230 -206.38 1035,-20\n+0001fd30: 342e 3631 2031 3234 392e 3035 2c2d 3137 4.61 1249.05,-17\n+0001fd40: 372e 3733 2031 3530 342e 3539 2c2d 3136 7.73 1504.59,-16\n+0001fd50: 342e 3039 2031 3632 322e 3438 2c2d 3135 4.09 1622.48,-15\n+0001fd60: 382e 3833 222f 3e0a 3c70 6f6c 7967 6f6e 8.83\"/>.<polygon\n+0001fd70: 2066 696c 6c3d 2272 6564 2220 7374 726f fill=\"red\" stro\n+0001fd80: 6b65 3d22 7265 6422 2070 6f69 6e74 733d ke=\"red\" points=\n+0001fd90: 2231 3632 322e 3934 2c2d 3136 322e 3331 \"1622.94,-162.31\n+0001fda0: 2031 3633 322e 3737 2c2d 3135 382e 3337 1632.77,-158.37\n+0001fdb0: 2031 3632 322e 3633 2c2d 3135 352e 3332 1622.63,-155.32\n+0001fdc0: 2031 3632 322e 3934 2c2d 3136 322e 3331 1622.94,-162.31\n+0001fdd0: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n+0001fde0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+0001fdf0: 5f6d 6472 756e 2623 3435 3b26 6774 3b6d _mdrun->m\n+0001fe00: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+0001fe10: 735f 6e62 6e78 6d20 2d2d 3e0a 3c67 2069 s_nbnxm -->.<g i\n+0001fe20: 643d 2265 6467 6532 3034 2220 636c 6173 d=\"edge204\" clas\n+0001fe30: 733d 2265 6467 6522 3e0a 3c74 6974 6c65 s=\"edge\">.<title\n+0001fe40: 3e6d 6f64 756c 655f 7372 635f 6772 6f6d >module_src_grom\n+0001fe50: 6163 735f 6d64 7275 6e26 2334 353b 2667 acs_mdrun-&g\n+0001fe60: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+0001fe70: 6d61 6373 5f6e 626e 786d 3c2f 7469 746c macs_nbnxm</titl\n+0001fe80: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+0001fe90: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n+0001fea0: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n+0001feb0: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+0001fec0: 4d39 3334 2e32 392c 2d32 3230 2e32 3743 M934.29,-220.27C\n+0001fed0: 3832 392e 3831 2c2d 3232 342e 3638 2034 829.81,-224.68 4\n+0001fee0: 3932 2e33 312c 2d32 3430 2e38 3520 3435 92.31,-240.85 45\n+0001fef0: 322c 2d32 3637 2e34 3820 3339 332e 372c 2,-267.48 393.7,\n+0001ff00: 2d33 3036 2033 3737 2c2d 3333 352e 3738 -306 377,-335.78\n+0001ff10: 2033 3737 2c2d 3430 352e 3636 2033 3737 377,-405.66 377\n+0001ff20: 2c2d 3539 362e 3237 2033 3737 2c2d 3539 ,-596.27 377,-59\n+0001ff30: 362e 3237 2033 3737 2c2d 3539 362e 3237 6.27 377,-596.27\n+0001ff40: 2033 3737 2c2d 3634 352e 3738 2033 3733 377,-645.78 373\n+0001ff50: 2e31 312c 2d36 3538 2e30 3620 3337 322c 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332c 2d39 3537 2e30 3220 3637 382e 3636 3,-957.02 678.66\n+00020050: 2c2d 3936 332e 3634 222f 3e0a 3c2f 673e ,-963.64\"/>.</g>\n+00020060: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 .<!-- module_src\n+00020070: 5f67 726f 6d61 6373 5f6d 6472 756e 2623 _gromacs_mdrun&#\n+00020080: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00020090: 635f 6772 6f6d 6163 735f 6577 616c 6420 c_gromacs_ewald \n+000200a0: 2d2d 3e0a 3c67 2069 643d 2265 6467 6532 -->.<g id=\"edge2\n+000200b0: 3030 2220 636c 6173 733d 2265 6467 6522 00\" class=\"edge\"\n+000200c0: 3e0a 3c74 6974 6c65 3e6d 6f64 756c 655f >.<title>module_\n+000200d0: 7372 635f 6772 6f6d 6163 735f 6d64 7275 src_gromacs_mdru\n+000200e0: 6e26 2334 353b 2667 743b 6d6f 6475 6c65 n->module\n+000200f0: 5f73 7263 5f67 726f 6d61 6373 5f65 7761 _src_gromacs_ewa\n+00020100: 6c64 3c2f 7469 746c 653e 0a3c 7061 7468 ld......modu\n+00020270: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+00020280: 6472 756e 2623 3435 3b26 6774 3b6d 6f64 drun->mod\n+00020290: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+000202a0: 6c69 7374 6564 5f66 6f72 6365 733c 2f74 listed_forces</t\n+000202b0: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+000202c0: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" stroke=\"\n+000202d0: 2332 3832 6663 6322 2073 7472 6f6b 652d #282fcc\" stroke-\n+000202e0: 6461 7368 6172 7261 793d 2235 2c32 2220 dasharray=\"5,2\" \n+000202f0: 643d 224d 3939 352e 3637 2c2d 3231 352e d=\"M995.67,-215.\n+00020300: 3239 4331 3134 322e 3135 2c2d 3230 362e 29C1142.15,-206.\n+00020310: 3920 3137 3731 2e35 382c 2d31 3730 2e38 9 1771.58,-170.8\n+00020320: 3620 3139 3638 2e37 322c 2d31 3539 2e35 6 1968.72,-159.5\n+00020330: 3722 2f3e 0a3c 706f 6c79 676f 6e20 6669 7\"/>.<polygon fi\n+00020340: 6c6c 3d22 2332 3832 6663 6322 2073 7472 ll=\"#282fcc\" str\n+00020350: 6f6b 653d 2223 3238 3266 6363 2220 706f oke=\"#282fcc\" po\n+00020360: 696e 7473 3d22 3139 3639 2e31 2c2d 3136 ints=\"1969.1,-16\n+00020370: 332e 3035 2031 3937 382e 3838 2c2d 3135 3.05 1978.88,-15\n+00020380: 382e 3939 2031 3936 382e 372c 2d31 3536 8.99 1968.7,-156\n+00020390: 2e30 3720 3139 3639 2e31 2c2d 3136 332e .07 1969.1,-163.\n+000203a0: 3035 222f 3e0a 3c2f 673e 0a3c 212d 2d20 05\"/>.</g>.<!-- \n+000203b0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000203c0: 6373 5f6d 6472 756e 2623 3435 3b26 6774 cs_mdrun->\n+000203d0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+000203e0: 6163 735f 7261 6e64 6f6d 202d 2d3e 0a3c acs_random -->.<\n+000203f0: 6720 6964 3d22 6564 6765 3139 3922 2063 g id=\"edge199\" c\n+00020400: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.<ti\n+00020410: 746c 653e 6d6f 6475 6c65 5f73 7263 5f67 tle>module_src_g\n+00020420: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n+00020430: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00020440: 6772 6f6d 6163 735f 7261 6e64 6f6d 3c2f gromacs_random</\n+00020450: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+00020460: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+00020470: 2262 6c61 636b 2220 7374 726f 6b65 2d64 \"black\" stroke-d\n+00020480: 6173 6861 7272 6179 3d22 352c 3222 2064 asharray=\"5,2\" d\n+00020490: 3d22 4d39 3935 2e39 382c 2d32 3136 2e33 =\"M995.98,-216.3\n+000204a0: 3943 3131 3533 2e36 362c 2d32 3132 2e39 9C1153.66,-212.9\n+000204b0: 3720 3138 3637 2e39 392c 2d31 3936 2e31 7 1867.99,-196.1\n+000204c0: 3820 3230 3838 2c2d 3136 382e 3631 2032 8 2088,-168.61 2\n+000204d0: 3230 372e 3338 2c2d 3135 332e 3635 2032 207.38,-153.65 2\n+000204e0: 3334 362e 3035 2c2d 3131 392e 3932 2032 346.05,-119.92 2\n+000204f0: 3431 302e 3934 2c2d 3130 332e 3135 222f 410.94,-103.15\"/\n+00020500: 3e0a 3c70 6f6c 7967 6f6e 2066 696c 6c3d >.<polygon fill=\n+00020510: 2262 6c61 636b 2220 7374 726f 6b65 3d22 \"black\" stroke=\"\n+00020520: 626c 6163 6b22 2070 6f69 6e74 733d 2232 black\" points=\"2\n+00020530: 3431 312e 3931 2c2d 3130 362e 3531 2032 411.91,-106.51 2\n+00020540: 3432 302e 3731 2c2d 3130 302e 3631 2032 420.71,-100.61 2\n+00020550: 3431 302e 3135 2c2d 3939 2e37 3420 3234 410.15,-99.74 24\n+00020560: 3131 2e39 312c 2d31 3036 2e35 3122 2f3e 11.91,-106.51\"/>\n+00020570: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n+00020580: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n+00020590: 7275 6e26 2334 353b 2667 743b 6d6f 6475 run->modu\n+000205a0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f63 le_src_gromacs_c\n+000205b0: 6f6d 7061 7420 2d2d 3e0a 3c67 2069 643d ompat -->.<g id=\n+000205c0: 2265 6467 6532 3134 2220 636c 6173 733d \"edge214\" class=\n+000205d0: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+000205e0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+000205f0: 735f 6d64 7275 6e26 2334 353b 2667 743b s_mdrun->\n+00020600: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00020610: 6373 5f63 6f6d 7061 743c 2f74 6974 6c65 cs_compat</title\n+00020620: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+00020630: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n+00020640: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n+00020650: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n+00020660: 3937 312e 3837 2c2d 3230 342e 3731 4339 971.87,-204.71C9\n+00020670: 3833 2e33 352c 2d31 3834 2e33 3220 3130 83.35,-184.32 10\n+00020680: 3035 2e37 382c 2d31 3435 2e34 3520 3130 05.78,-145.45 10\n+00020690: 3132 2c2d 3134 312e 3734 2031 3037 332e 12,-141.74 1073.\n+000206a0: 3934 2c2d 3130 342e 3738 2031 3537 392e 94,-104.78 1579.\n+000206b0: 3038 2c2d 3935 2e36 3920 3137 3333 2e33 08,-95.69 1733.3\n+000206c0: 392c 2d39 332e 3737 222f 3e0a 3c70 6f6c 9,-93.77\"/>.<pol\n+000206d0: 7967 6f6e 2066 696c 6c3d 2223 3238 3266 ygon fill=\"#282f\n+000206e0: 6363 2220 7374 726f 6b65 3d22 2332 3832 cc\" stroke=\"#282\n+000206f0: 6663 6322 2070 6f69 6e74 733d 2231 3733 fcc\" points=\"173\n+00020700: 332e 3531 2c2d 3937 2e32 3720 3137 3433 3.51,-97.27 1743\n+00020710: 2e34 372c 2d39 332e 3635 2031 3733 332e .47,-93.65 1733.\n+00020720: 3432 2c2d 3930 2e32 3720 3137 3333 2e35 42,-90.27 1733.5\n+00020730: 312c 2d39 372e 3237 222f 3e0a 3c2f 673e 1,-97.27\"/>.</g>\n+00020740: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 .<!-- module_src\n+00020750: 5f67 726f 6d61 6373 5f6d 6472 756e 2623 _gromacs_mdrun&#\n+00020760: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n+00020770: 635f 6772 6f6d 6163 735f 636f 6d6d 616e c_gromacs_comman\n+00020780: 646c 696e 6520 2d2d 3e0a 3c67 2069 643d dline -->.<g id=\n+00020790: 2265 6467 6531 3935 2220 636c 6173 733d \"edge195\" class=\n+000207a0: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+000207b0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+000207c0: 735f 6d64 7275 6e26 2334 353b 2667 743b s_mdrun->\n+000207d0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000207e0: 6373 5f63 6f6d 6d61 6e64 6c69 6e65 3c2f cs_commandline</\n+000207f0: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+00020800: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+00020810: 2223 3238 3266 6363 2220 643d 224d 3938 \"#282fcc\" d=\"M98\n+00020820: 312e 382c 2d32 3239 2e35 3843 3939 352e 1.8,-229.58C995.\n+00020830: 3539 2c2d 3233 382e 3637 2031 3031 352e 59,-238.67 1015.\n+00020840: 3138 2c2d 3235 322e 3635 2031 3033 302c 18,-252.65 1030,\n+00020850: 2d32 3637 2e34 3820 3130 3430 2e35 322c -267.48 1040.52,\n+00020860: 2d32 3738 2e30 3120 3130 3339 2e39 372c -278.01 1039.97,\n+00020870: 2d32 3833 2e33 3520 3130 3530 2c2d 3239 -283.35 1050,-29\n+00020880: 342e 3335 2031 3132 322e 3437 2c2d 3337 4.35 1122.47,-37\n+00020890: 332e 3832 2031 3135 362e 3634 2c2d 3337 3.82 1156.64,-37\n+000208a0: 372e 3434 2031 3233 302c 2d34 3536 2e30 7.44 1230,-456.0\n+000208b0: 3920 3132 3634 2e35 2c2d 3439 332e 3038 9 1264.5,-493.08\n+000208c0: 2031 3236 362e 3939 2c2d 3530 372e 3520 1266.99,-507.5 \n+000208d0: 3133 3030 2c2d 3534 352e 3833 2031 3330 1300,-545.83 130\n+000208e0: 382e 3334 2c2d 3535 352e 3532 2031 3331 8.34,-555.52 131\n+000208f0: 382e 3033 2c2d 3536 352e 3834 2031 3332 8.03,-565.84 132\n+00020900: 362e 3336 2c2d 3537 342e 3436 222f 3e0a 6.36,-574.46\"/>.\n+00020910: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 <polygon fill=\"#\n+00020920: 3238 3266 6363 2220 7374 726f 6b65 3d22 282fcc\" stroke=\"\n+00020930: 2332 3832 6663 6322 2070 6f69 6e74 733d #282fcc\" points=\n+00020940: 2231 3332 342e 3036 2c2d 3537 372e 3132 \"1324.06,-577.12\n+00020950: 2031 3333 332e 3535 2c2d 3538 312e 3833 1333.55,-581.83\n+00020960: 2031 3332 392e 3037 2c2d 3537 322e 3233 1329.07,-572.23\n+00020970: 2031 3332 342e 3036 2c2d 3537 372e 3132 1324.06,-577.12\n+00020980: 222f 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f \"/>.</g>.<!-- mo\n+00020990: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+000209a0: 5f6d 6472 756e 2623 3435 3b26 6774 3b6d _mdrun->m\n+000209b0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+000209c0: 735f 6770 755f 7574 696c 7320 2d2d 3e0a s_gpu_utils -->.\n+000209d0: 3c67 2069 643d 2265 6467 6532 3037 2220 <g id=\"edge207\" \n+000209e0: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n+000209f0: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+00020a00: 6772 6f6d 6163 735f 6d64 7275 6e26 2334 gromacs_mdrun\n+00020a10: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00020a20: 5f67 726f 6d61 6373 5f67 7075 5f75 7469 _gromacs_gpu_uti\n+00020a30: 6c73 3c2f 7469 746c 653e 0a3c 7061 7468 ls......m\n+00020c40: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00020c50: 735f 6d64 7275 6e26 2334 353b 2667 743b s_mdrun->\n+00020c60: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00020c70: 6373 5f74 6173 6b61 7373 6967 6e6d 656e cs_taskassignmen\n+00020c80: 743c 2f74 6974 6c65 3e0a 3c70 6174 6820 t...\n+00020d80: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...modul\n+00020dd0: 655f 7372 635f 6772 6f6d 6163 735f 7265 e_src_gromacs_re\n+00020de0: 7374 7261 696e 743c 2f74 6974 6c65 3e0a straint.\n+00020df0: 3c67 2069 643d 2261 5f6e 6f64 6534 3722 ..restraint...\n+00020f20: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...mod\n+00020f90: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00020fa0: 6d64 7275 6e26 2334 353b 2667 743b 6d6f mdrun->mo\n+00020fb0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00020fc0: 5f72 6573 7472 6169 6e74 3c2f 7469 746c _restraint</titl\n+00020fd0: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00020fe0: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n+00020ff0: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n+00021000: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+00021010: 4d39 3334 2e38 362c 2d32 3134 2e34 3743 M934.86,-214.47C\n+00021020: 3832 332e 3237 2c2d 3230 342e 3933 2034 823.27,-204.93 4\n+00021030: 3333 2e31 352c 2d31 3731 2e35 3820 3239 33.15,-171.58 29\n+00021040: 382e 3834 2c2d 3136 302e 3039 222f 3e0a 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746c 653e 6d6f 6475 6c65 5f73 7263 5f67 tle>module_src_g\n+00021140: 726f 6d61 6373 5f6d 6472 756e 2623 3435 romacs_mdrun-\n+00021150: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00021160: 6772 6f6d 6163 735f 6d64 7275 6e75 7469 gromacs_mdrunuti\n+00021170: 6c69 7479 3c2f 7469 746c 653e 0a3c 7061 lity......\n+00021510: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00021520: 6373 5f73 696d 643c 2f74 6974 6c65 3e0a cs_simd.\n+00021530: 3c67 2069 643d 2261 5f6e 6f64 6533 3922 ..\n+000215e0: 3c74 6578 7420 7465 7874 2d61 6e63 686f simd...<\n+00021650: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>..\n+000216a0: 3c67 2069 643d 2265 6467 6532 3139 2220 .module_src_\n+000216d0: 6772 6f6d 6163 735f 636f 6f72 6469 6e61 gromacs_coordina\n+000216e0: 7465 696f 2623 3435 3b26 6774 3b6d 6f64 teio->mod\n+000216f0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00021700: 6f70 7469 6f6e 733c 2f74 6974 6c65 3e0a options.\n+00021710: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .\n+00021860: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....module\n+00021940: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+00021950: 7072 6570 726f 6365 7373 2623 3435 3b26 preprocess-&\n+00021960: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00021970: 6f6d 6163 735f 696d 643c 2f74 6974 6c65 omacs_imd</title\n+00021980: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+00021990: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n+000219a0: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n+000219b0: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n+000219c0: 3132 3334 2e35 322c 2d31 3333 362e 3131 1234.52,-1336.11\n+000219d0: 4331 3231 392e 3238 2c2d 3133 3134 2e35 C1219.28,-1314.5\n+000219e0: 3520 3131 3931 2c2d 3132 3638 2e36 3720 5 1191,-1268.67 \n+000219f0: 3131 3931 2c2d 3132 3234 2e39 3720 3131 1191,-1224.97 11\n+00021a00: 3931 2c2d 3132 3234 2e39 3720 3131 3931 91,-1224.97 1191\n+00021a10: 2c2d 3132 3234 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cess->mod\n+00021b00: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00021b10: 6666 7420 2d2d 3e0a 3c67 2069 643d 2265 fft -->.<g id=\"e\n+00021b20: 6467 6532 3331 2220 636c 6173 733d 2265 dge231\" class=\"e\n+00021b30: 6467 6522 3e0a 3c74 6974 6c65 3e6d 6f64 dge\">.<title>mod\n+00021b40: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00021b50: 676d 7870 7265 7072 6f63 6573 7326 2334 gmxpreprocess\n+00021b60: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00021b70: 5f67 726f 6d61 6373 5f66 6674 3c2f 7469 _gromacs_fft</ti\n+00021b80: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+00021b90: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+00021ba0: 6266 6266 6266 2220 643d 224d 3131 3835 bfbfbf\" d=\"M1185\n+00021bb0: 2e30 342c 2d31 3334 392e 3232 4331 3037 .04,-1349.22C107\n+00021bc0: 352e 3438 2c2d 3133 3439 2e31 3120 3834 5.48,-1349.11 84\n+00021bd0: 352e 3737 2c2d 3133 3433 2e35 3320 3738 5.77,-1343.53 78\n+00021be0: 312c 2d31 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;>module_src_\n+00021cd0: 6772 6f6d 6163 735f 676d 786c 6962 202d gromacs_gmxlib -\n+00021ce0: 2d3e 0a3c 6720 6964 3d22 6564 6765 3232 ->.<g id=\"edge22\n+00021cf0: 3522 2063 6c61 7373 3d22 6564 6765 223e 5\" class=\"edge\">\n+00021d00: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+00021d10: 7263 5f67 726f 6d61 6373 5f67 6d78 7072 rc_gromacs_gmxpr\n+00021d20: 6570 726f 6365 7373 2623 3435 3b26 6774 eprocess->\n+00021d30: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00021d40: 6163 735f 676d 786c 6962 3c2f 7469 746c acs_gmxlib</titl\n+00021d50: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00021d60: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+00021d70: 6266 6266 2220 643d 224d 3131 3838 2e33 bfbf\" d=\"M1188.3\n+00021d80: 2c2d 3133 3435 2e33 3943 3130 3636 2e32 ,-1345.39C1066.2\n+00021d90: 342c 2d31 3333 362e 3620 3738 362c 2d31 4,-1336.6 786,-1\n+00021da0: 3330 372e 3433 2037 3836 2c2d 3132 3234 307.43 786,-1224\n+00021db0: 2e39 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6365 macs_gmxpreproce\n+00021ea0: 7373 2623 3435 3b26 6774 3b6d 6f64 756c ss->modul\n+00021eb0: 655f 7372 635f 6772 6f6d 6163 735f 6f70 e_src_gromacs_op\n+00021ec0: 7469 6f6e 7320 2d2d 3e0a 3c67 2069 643d tions -->.<g id=\n+00021ed0: 2265 6467 6532 3336 2220 636c 6173 733d \"edge236\" class=\n+00021ee0: 2265 6467 6522 3e0a 3c74 6974 6c65 3e6d \"edge\">.<title>m\n+00021ef0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00021f00: 735f 676d 7870 7265 7072 6f63 6573 7326 s_gmxpreprocess&\n+00021f10: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00021f20: 7263 5f67 726f 6d61 6373 5f6f 7074 696f rc_gromacs_optio\n+00021f30: 6e73 3c2f 7469 746c 653e 0a3c 7061 7468 ns......modul\n+00022140: 655f 7372 635f 6772 6f6d 6163 735f 676d e_src_gromacs_gm\n+00022150: 7870 7265 7072 6f63 6573 7326 2334 353b xpreprocess-\n+00022160: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00022170: 726f 6d61 6373 5f6d 646c 6962 3c2f 7469 romacs_mdlib</ti\n+00022180: 746c 653e 0a3c 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e=\"#bfbfbf\" poin\n+00022270: 7473 3d22 3132 3635 2e36 362c 2d37 3937 ts=\"1265.66,-797\n+00022280: 2e30 3320 3132 3535 2e33 342c 2d37 3934 .03 1255.34,-794\n+00022290: 2e36 3320 3132 3631 2e39 312c 2d38 3032 .63 1261.91,-802\n+000222a0: 2e39 3420 3132 3635 2e36 362c 2d37 3937 .94 1265.66,-797\n+000222b0: 2e30 3322 2f3e 0a3c 2f67 3e0a 3c21 2d2d .03\"/>.</g>.<!--\n+000222c0: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+000222d0: 6163 735f 676d 7870 7265 7072 6f63 6573 acs_gmxpreproces\n+000222e0: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+000222f0: 5f73 7263 5f67 726f 6d61 6373 5f66 696c _src_gromacs_fil\n+00022300: 6569 6f20 2d2d 3e0a 3c67 2069 643d 2265 eio -->.<g id=\"e\n+00022310: 6467 6532 3231 2220 636c 6173 733d 2265 dge221\" class=\"e\n+00022320: 6467 6522 3e0a 3c74 6974 6c65 3e6d 6f64 dge\">.<title>mod\n+00022330: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00022340: 676d 7870 7265 7072 6f63 6573 7326 2334 gmxpreprocess\n+00022350: 353b 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7263 5f67 >module_src_g\n+000227e0: 726f 6d61 6373 5f64 6f6d 6465 6320 2d2d romacs_domdec --\n+000227f0: 3e0a 3c67 2069 643d 2265 6467 6532 3236 >.<g id=\"edge226\n+00022800: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n+00022810: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n+00022820: 635f 6772 6f6d 6163 735f 676d 7870 7265 c_gromacs_gmxpre\n+00022830: 7072 6f63 6573 7326 2334 353b 2667 743b process->\n+00022840: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00022850: 6373 5f64 6f6d 6465 633c 2f74 6974 6c65 cs_domdec</title\n+00022860: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n+00022870: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n+00022880: 6663 6322 2073 7472 6f6b 652d 6461 7368 fcc\" stroke-dash\n+00022890: 6172 7261 793d 2235 2c32 2220 643d 224d array=\"5,2\" d=\"M\n+000228a0: 3131 3836 2e35 342c 2d31 3334 362e 3743 1186.54,-1346.7C\n+000228b0: 3130 3733 2e38 382c 2d31 3334 322e 3137 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3935 2e37 09 524.92,-295.7\n+00022a90: 3422 2f3e 0a3c 2f67 3e0a 3c21 2d2d 206d 4\"/>.</g>.<!-- m\n+00022aa0: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00022ab0: 735f 676d 7870 7265 7072 6f63 6573 7326 s_gmxpreprocess&\n+00022ac0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00022ad0: 7263 5f67 726f 6d61 6373 5f67 6d78 616e rc_gromacs_gmxan\n+00022ae0: 6120 2d2d 3e0a 3c67 2069 643d 2265 6467 a -->.<g id=\"edg\n+00022af0: 6532 3234 2220 636c 6173 733d 2265 6467 e224\" class=\"edg\n+00022b00: 6522 3e0a 3c74 6974 6c65 3e6d 6f64 756c e\">.<title>modul\n+00022b10: 655f 7372 635f 6772 6f6d 6163 735f 676d e_src_gromacs_gm\n+00022b20: 7870 7265 7072 6f63 6573 7326 2334 353b xpreprocess-\n+00022b30: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00022b40: 726f 6d61 6373 5f67 6d78 616e 613c 2f74 romacs_gmxana</t\n+00022b50: 6974 6c65 3e0a 3c70 6174 6820 6669 6c6c itle>.<path fill\n+00022b60: 3d22 6e6f 6e65 2220 7374 726f 6b65 3d22 =\"none\" 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omacs_ewald</tit\n+00022ed0: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+00022ee0: 6e6f 6e65 2220 7374 726f 6b65 3d22 2332 none\" stroke=\"#2\n+00022ef0: 3832 6663 6322 2073 7472 6f6b 652d 6461 82fcc\" stroke-da\n+00022f00: 7368 6172 7261 793d 2235 2c32 2220 643d sharray=\"5,2\" d=\n+00022f10: 224d 3131 3836 2e30 362c 2d31 3334 372e \"M1186.06,-1347.\n+00022f20: 3531 4331 3033 372e 3438 2c2d 3133 3434 51C1037.48,-1344\n+00022f30: 2e30 3220 3634 352e 3734 2c2d 3133 3331 .02 645.74,-1331\n+00022f40: 2e39 3920 3532 302c 2d31 3330 302e 3237 .99 520,-1300.27\n+00022f50: 2032 3334 2e37 372c 2d31 3232 382e 3331 234.77,-1228.31\n+00022f60: 2033 372c 2d31 3134 312e 3931 2033 372c 37,-1141.91 37,\n+00022f70: 2d38 3437 2e37 3520 3337 2c2d 3834 372e -847.75 37,-847.\n+00022f80: 3735 2033 372c 2d38 3437 2e37 3520 3337 75 37,-847.75 37\n+00022f90: 2c2d 3231 372e 3035 2033 372c 2d31 3832 ,-217.05 37,-182\n+00022fa0: 2e30 3520 3335 2e38 2c2d 3136 372e 3032 .05 35.8,-167.02\n+00022fb0: 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7374 src_gromacs_list\n+000230a0: 6564 5f66 6f72 6365 7320 2d2d 3e0a 3c67 ed_forces -->.<g\n+000230b0: 2069 643d 2265 6467 6532 3232 2220 636c id=\"edge222\" cl\n+000230c0: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.<tit\n+000230d0: 6c65 3e6d 6f64 756c 655f 7372 635f 6772 le>module_src_gr\n+000230e0: 6f6d 6163 735f 676d 7870 7265 7072 6f63 omacs_gmxpreproc\n+000230f0: 6573 7326 2334 353b 2667 743b 6d6f 6475 ess->modu\n+00023100: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6c le_src_gromacs_l\n+00023110: 6973 7465 645f 666f 7263 6573 3c2f 7469 isted_forces</ti\n+00023120: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+00023130: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+00023140: 3238 3266 6363 2220 7374 726f 6b65 2d64 282fcc\" stroke-d\n+00023150: 6173 6861 7272 6179 3d22 352c 3222 2064 asharray=\"5,2\" d\n+00023160: 3d22 4d31 3330 322e 3532 2c2d 3133 3438 =\"M1302.52,-1348\n+00023170: 2e34 3843 3134 3237 2e38 332c 2d31 3334 .48C1427.83,-134\n+00023180: 372e 3233 2031 3731 372e 3937 2c2d 3133 7.23 1717.97,-13\n+00023190: 3430 2031 3830 372c 2d31 3330 302e 3237 40 1807,-1300.27\n+000231a0: 2031 3938 312e 3639 2c2d 3132 3232 2e33 1981.69,-1222.3\n+000231b0: 3220 3139 3938 2e37 392c 2d31 3134 372e 2 1998.79,-1147.\n+000231c0: 3632 2032 3130 312c 2d39 3835 2e39 3220 62 2101,-985.92 \n+000231d0: 3232 3238 2e37 312c 2d37 3833 2e39 2032 2228.71,-783.9 2\n+000231e0: 3236 352e 3038 2c2d 3638 332e 3937 2032 265.08,-683.97 2\n+000231f0: 3139 332c 2d34 3536 2e30 3920 3231 3730 193,-456.09 2170\n+00023200: 2e33 322c 2d33 3834 2e33 3720 3230 3937 .32,-384.37 2097\n+00023210: 2e37 322c 2d32 3231 2e36 3820 3230 3835 .72,-221.68 2085\n+00023220: 2c2d 3230 342e 3631 2032 3037 362e 3337 ,-204.61 2076.37\n+00023230: 2c2d 3139 332e 3033 2032 3036 342e 3437 ,-193.03 2064.47\n+00023240: 2c2d 3138 322e 3336 2032 3035 332e 3738 ,-182.36 2053.78\n+00023250: 2c2d 3137 342e 3031 222f 3e0a 3c70 6f6c ,-174.01\"/>.<pol\n+00023260: 7967 6f6e 2066 696c 6c3d 2223 3238 3266 ygon fill=\"#282f\n+00023270: 6363 2220 7374 726f 6b65 3d22 2332 3832 cc\" stroke=\"#282\n+00023280: 6663 6322 2070 6f69 6e74 733d 2232 3035 fcc\" points=\"205\n+00023290: 352e 3635 2c2d 3137 312e 3033 2032 3034 5.65,-171.03 204\n+000232a0: 352e 3535 2c2d 3136 372e 3833 2032 3035 5.55,-167.83 205\n+000232b0: 312e 3434 2c2d 3137 362e 3633 2032 3035 1.44,-176.63 205\n+000232c0: 352e 3635 2c2d 3137 312e 3033 222f 3e0a 5.65,-171.03\"/>.\n+000232d0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+000232e0: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+000232f0: 7072 6570 726f 6365 7373 2623 3435 3b26 preprocess-&\n+00023300: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00023310: 6f6d 6163 735f 6d64 7275 6e20 2d2d 3e0a omacs_mdrun -->.\n+00023320: 3c67 2069 643d 2265 6467 6532 3333 2220 <g id=\"edge233\" \n+00023330: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n+00023340: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+00023350: 6772 6f6d 6163 735f 676d 7870 7265 7072 gromacs_gmxprepr\n+00023360: 6f63 6573 7326 2334 353b 2667 743b 6d6f ocess->mo\n+00023370: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00023380: 5f6d 6472 756e 3c2f 7469 746c 653e 0a3c _mdrun.<\n+00023390: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+000233a0: 2073 7472 6f6b 653d 2223 3238 3266 6363 stroke=\"#282fcc\n+000233b0: 2220 7374 726f 6b65 2d64 6173 6861 7272 \" stroke-dasharr\n+000233c0: 6179 3d22 352c 3222 2064 3d22 4d31 3138 ay=\"5,2\" d=\"M118\n+000233d0: 362e 3534 2c2d 3133 3436 2e35 3243 3130 6.54,-1346.52C10\n+000233e0: 3631 2e38 392c 2d31 3334 312e 3332 2037 61.89,-1341.32 7\n+000233f0: 3730 2e31 372c 2d31 3332 362e 3639 2036 70.17,-1326.69 6\n+00023400: 3735 2c2d 3133 3030 2e32 3720 3537 312e 75,-1300.27 571.\n+00023410: 3238 2c2d 3132 3731 2e34 3820 3534 362e 28,-1271.48 546.\n+00023420: 3532 2c2d 3132 3438 2e31 3620 3436 382c 52,-1248.16 468,\n+00023430: 2d31 3137 342e 3533 2032 3334 2e35 372c -1174.53 234.57,\n+00023440: 2d39 3535 2e36 3420 3331 372c 2d37 3930 -955.64 317,-790\n+00023450: 2e35 3320 3331 372c 2d34 3730 2e35 3320 .53 317,-470.53 \n+00023460: 3331 372c 2d34 3730 2e35 3320 3331 372c 317,-470.53 317,\n+00023470: 2d34 3730 2e35 3320 3331 372c 2d34 3035 -470.53 317,-405\n+00023480: 2e36 3620 3331 372c 2d33 3432 2e36 3220 .66 317,-342.62 \n+00023490: 3330 302e 3739 2c2d 3330 382e 3039 2033 300.79,-308.09 3\n+000234a0: 3439 2c2d 3236 372e 3438 2033 3731 2e30 49,-267.48 371.0\n+000234b0: 322c 2d32 3438 2e39 3320 3738 392e 3333 2,-248.93 789.33\n+000234c0: 2c2d 3232 372e 3433 2039 3233 2e37 372c ,-227.43 923.77,\n+000234d0: 2d32 3230 2e39 3722 2f3e 0a3c 706f 6c79 -220.97\"/>...<\n+00023550: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00023560: 726f 6d61 6373 5f67 6d78 7072 6570 726f romacs_gmxprepro\n+00023570: 6365 7373 2623 3435 3b26 6774 3b6d 6f64 cess->mod\n+00023580: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00023590: 7261 6e64 6f6d 202d 2d3e 0a3c 6720 6964 random -->..\n+000235c0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000235d0: 6373 5f67 6d78 7072 6570 726f 6365 7373 cs_gmxpreprocess\n+000235e0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+000235f0: 7372 635f 6772 6f6d 6163 735f 7261 6e64 src_gromacs_rand\n+00023600: 6f6d 3c2f 7469 746c 653e 0a3c 7061 7468 om...<\n+00023820: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module\n+000238a0: 5f73 7263 5f67 726f 6d61 6373 5f67 6d78 _src_gromacs_gmx\n+000238b0: 7072 6570 726f 6365 7373 2623 3435 3b26 preprocess-&\n+000238c0: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+000238d0: 6f6d 6163 735f 636f 6d6d 616e 646c 696e omacs_commandlin\n+000238e0: 653c 2f74 6974 6c65 3e0a 3c70 6174 6820 e.....\n+00023a90: 3c67 2069 643d 2265 6467 6532 3334 2220 .module_src_\n+00023ac0: 6772 6f6d 6163 735f 676d 7870 7265 7072 gromacs_gmxprepr\n+00023ad0: 6f63 6573 7326 2334 353b 2667 743b 6d6f ocess->mo\n+00023ae0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00023af0: 5f6d 6472 756e 7574 696c 6974 793c 2f74 _mdrunutility....<\n+00023c80: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00023c90: 726f 6d61 6373 5f67 6d78 7072 6570 726f romacs_gmxprepro\n+00023ca0: 6365 7373 2623 3435 3b26 6774 3b6d 6f64 cess->mod\n+00023cb0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00023cc0: 6170 706c 6965 645f 666f 7263 6573 5f61 applied_forces_a\n+00023cd0: 7768 202d 2d3e 0a3c 6720 6964 3d22 6564 wh -->..modu\n+00023d00: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n+00023d10: 6d78 7072 6570 726f 6365 7373 2623 3435 mxpreprocess-\n+00023d20: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00023d30: 6772 6f6d 6163 735f 6170 706c 6965 645f gromacs_applied_\n+00023d40: 666f 7263 6573 5f61 7768 3c2f 7469 746c forces_awh</titl\n+00023d50: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00023d60: 6f6e 6522 2073 7472 6f6b 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7265 7072 6f63 6573 7326 2334 gmxpreprocess\n+00023f40: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00023f50: 5f74 6573 7475 7469 6c73 202d 2d3e 0a3c _testutils -->.<\n+00023f60: 6720 6964 3d22 6564 6765 3233 3722 2063 g id=\"edge237\" c\n+00023f70: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.<ti\n+00023f80: 746c 653e 6d6f 6475 6c65 5f73 7263 5f67 tle>module_src_g\n+00023f90: 726f 6d61 6373 5f67 6d78 7072 6570 726f romacs_gmxprepro\n+00023fa0: 6365 7373 2623 3435 3b26 6774 3b6d 6f64 cess->mod\n+00023fb0: 756c 655f 7372 635f 7465 7374 7574 696c ule_src_testutil\n+00023fc0: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s......module_\n+00024150: 7372 635f 6772 6f6d 6163 735f 636f 6d6d src_gromacs_comm\n+00024160: 616e 646c 696e 6526 2334 353b 2667 743b andline->\n+00024170: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00024180: 6373 5f6f 7074 696f 6e73 3c2f 7469 746c cs_options</titl\n+00024190: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path 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2c2d 3131 342e 3439 222f 3e0a 3c70 33,-114.49\"/>.<p\n+00024290: 6f6c 7967 6f6e 2066 696c 6c3d 2223 3238 olygon fill=\"#28\n+000242a0: 3266 6363 2220 7374 726f 6b65 3d22 2332 2fcc\" stroke=\"#2\n+000242b0: 3832 6663 6322 2070 6f69 6e74 733d 2231 82fcc\" points=\"1\n+000242c0: 3135 392e 3433 2c2d 3131 322e 3836 2031 159.43,-112.86 1\n+000242d0: 3135 312e 3739 2c2d 3130 352e 3533 2031 151.79,-105.53 1\n+000242e0: 3135 332e 3139 2c2d 3131 362e 3033 2031 153.19,-116.03 1\n+000242f0: 3135 392e 3433 2c2d 3131 322e 3836 222f 159.43,-112.86\"/\n+00024300: 3e0a 3c2f 673e 0a3c 212d 2d20 6d6f 6475 >.</g>.<!-- modu\n+00024310: 6c65 5f73 7263 5f67 726f 6d61 6373 5f63 le_src_gromacs_c\n+00024320: 6f6d 6d61 6e64 6c69 6e65 2623 3435 3b26 ommandline-&\n+00024330: 6774 3b6d 6f64 756c 655f 7372 635f 6772 gt;module_src_gr\n+00024340: 6f6d 6163 735f 6669 6c65 696f 202d 2d3e omacs_fileio -->\n+00024350: 0a3c 6720 6964 3d22 6564 6765 3234 3022 .<g id=\"edge240\"\n+00024360: 2063 6c61 7373 3d22 6564 6765 223e 0a3c class=\"edge\">.<\n+00024370: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n+00024380: 5f67 726f 6d61 6373 5f63 6f6d 6d61 6e64 _gromacs_command\n+00024390: 6c69 6e65 2623 3435 3b26 6774 3b6d 6f64 line->mod\n+000243a0: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+000243b0: 6669 6c65 696f 3c2f 7469 746c 653e 0a3c fileio.<\n+000243c0: 7061 7468 2066 696c 6c3d 226e 6f6e 6522 path fill=\"none\"\n+000243d0: 2073 7472 6f6b 653d 2223 6266 6266 6266 stroke=\"#bfbfbf\n+000243e0: 2220 643d 224d 3133 3638 2e34 382c 2d35 \" d=\"M1368.48,-5\n+000243f0: 3832 2e39 3643 3133 3838 2e37 322c 2d35 82.96C1388.72,-5\n+00024400: 3732 2e37 3820 3134 3138 2e35 312c 2d35 72.78 1418.51,-5\n+00024410: 3537 2e37 3920 3134 3430 2e30 332c 2d35 57.79 1440.03,-5\n+00024420: 3436 2e39 3622 2f3e 0a3c 706f 6c79 676f 46.96\"/>....\n+000244f0: 3c67 2069 643d 2265 6467 6532 3338 2220 .module_src_\n+00024520: 6772 6f6d 6163 735f 636f 6d6d 616e 646c gromacs_commandl\n+00024530: 696e 6526 2334 353b 2667 743b 6d6f 6475 ine->modu\n+00024540: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6f le_src_gromacs_o\n+00024550: 6e6c 696e 6568 656c 703c 2f74 6974 6c65 nlinehelp......modu\n+000246e0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n+000246f0: 7075 5f75 7469 6c73 2623 3435 3b26 6774 pu_utils->\n+00024700: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00024710: 6163 735f 7574 696c 6974 793c 2f74 6974 acs_utility</tit\n+00024720: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+00024730: 6e6f 6e65 2220 7374 726f 6b65 3d22 2332 none\" stroke=\"#2\n+00024740: 6363 6332 3822 2073 7472 6f6b 652d 6461 ccc28\" stroke-da\n+00024750: 7368 6172 7261 793d 2235 2c32 2220 643d sharray=\"5,2\" d=\n+00024760: 224d 3731 392e 352c 2d31 3034 332e 3239 \"M719.5,-1043.29\n+00024770: 4337 3636 2e35 312c 2d31 3035 342e 3232 C766.51,-1054.22\n+00024780: 2038 3532 2e36 372c 2d31 3037 352e 3439 852.67,-1075.49\n+00024790: 2038 3939 2e39 372c 2d31 3038 372e 3822 899.97,-1087.8\"\n+000247a0: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n+000247b0: 3d22 2332 6363 6332 3822 2073 7472 6f6b =\"#2ccc28\" strok\n+000247c0: 653d 2223 3263 6363 3238 2220 706f 696e e=\"#2ccc28\" poin\n+000247d0: 7473 3d22 3839 392e 3136 2c2d 3130 3931 ts=\"899.16,-1091\n+000247e0: 2e32 3120 3930 392e 3732 2c2d 3130 3930 .21 909.72,-1090\n+000247f0: 2e33 3620 3930 302e 3934 2c2d 3130 3834 .36 900.94,-1084\n+00024800: 2e34 3420 3839 392e 3136 2c2d 3130 3931 .44 899.16,-1091\n+00024810: 2e32 3122 2f3e 0a3c 2f67 3e0a 3c21 2d2d .21\"/>.</g>.<!--\n+00024820: 206d 6f64 756c 655f 7372 635f 6772 6f6d module_src_grom\n+00024830: 6163 735f 6770 755f 7574 696c 7326 2334 acs_gpu_utils\n+00024840: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00024850: 5f67 726f 6d61 6373 5f6d 6174 6820 2d2d _gromacs_math --\n+00024860: 3e0a 3c67 2069 643d 2265 6467 6532 3434 >.<g id=\"edge244\n+00024870: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n+00024880: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n+00024890: 635f 6772 6f6d 6163 735f 6770 755f 7574 c_gromacs_gpu_ut\n+000248a0: 696c 7326 2334 353b 2667 743b 6d6f 6475 ils->modu\n+000248b0: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n+000248c0: 6174 683c 2f74 6974 6c65 3e0a 3c70 6174 ath..\n+00024a50: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ...\n+00024ca0: 3c67 2069 643d 2265 6467 6532 3432 2220 .module_src_\n+00024cd0: 6772 6f6d 6163 735f 6770 755f 7574 696c gromacs_gpu_util\n+00024ce0: 7326 2334 353b 2667 743b 6d6f 6475 6c65 s->module\n+00024cf0: 5f73 7263 5f67 726f 6d61 6373 5f6d 6474 _src_gromacs_mdt\n+00024d00: 7970 6573 3c2f 7469 746c 653e 0a3c 7061 ypes......module\n+00025040: 5f73 7263 5f67 726f 6d61 6373 5f74 6173 _src_gromacs_tas\n+00025050: 6b61 7373 6967 6e6d 656e 7426 2334 353b kassignment-\n+00025060: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00025070: 726f 6d61 6373 5f65 7373 656e 7469 616c romacs_essential\n+00025080: 6479 6e61 6d69 6373 3c2f 7469 746c 653e dynamics\n+00025090: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e .....<\n+000251d0: 6720 6964 3d22 6564 6765 3235 3222 2063 g id=\"edge252\" c\n+000251e0: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n+00025200: 726f 6d61 6373 5f74 6173 6b61 7373 6967 romacs_taskassig\n+00025210: 6e6d 656e 7426 2334 353b 2667 743b 6d6f nment->mo\n+00025220: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00025230: 5f67 6d78 6c69 623c 2f74 6974 6c65 3e0a _gmxlib.\n+00025240: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 ...<\n+000253c0: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+000253d0: 726f 6d61 6373 5f74 6173 6b61 7373 6967 romacs_taskassig\n+000253e0: 6e6d 656e 7426 2334 353b 2667 743b 6d6f nment->mo\n+000253f0: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00025400: 5f68 6172 6477 6172 6520 2d2d 3e0a 3c67 _hardware -->..module_src_gr\n+00025440: 6f6d 6163 735f 7461 736b 6173 7369 676e omacs_taskassign\n+00025450: 6d65 6e74 2623 3435 3b26 6774 3b6d 6f64 ment->mod\n+00025460: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00025470: 6861 7264 7761 7265 3c2f 7469 746c 653e hardware\n+00025480: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......module\n+00025620: 5f73 7263 5f67 726f 6d61 6373 5f74 6173 _src_gromacs_tas\n+00025630: 6b61 7373 6967 6e6d 656e 7426 2334 353b kassignment-\n+00025640: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+00025650: 726f 6d61 6373 5f6d 646c 6962 3c2f 7469 romacs_mdlib</ti\n+00025660: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+00025670: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+00025680: 6266 6266 6266 2220 643d 224d 3638 302e bfbfbf\" d=\"M680.\n+00025690: 3339 2c2d 3432 302e 3139 4336 3836 2e31 39,-420.19C686.1\n+000256a0: 2c2d 3434 322e 3432 2036 3937 2c2d 3439 ,-442.42 697,-49\n+000256b0: 302e 3237 2036 3937 2c2d 3533 312e 3420 0.27 697,-531.4 \n+000256c0: 3639 372c 2d35 3936 2e32 3720 3639 372c 697,-596.27 697,\n+000256d0: 2d35 3936 2e32 3720 3639 372c 2d35 3936 -596.27 697,-596\n+000256e0: 2e32 3720 3639 372c 2d36 3730 2e37 3920 .27 697,-670.79 \n+000256f0: 3732 382e 3031 2c2d 3639 362e 3233 2037 728.01,-696.23 7\n+00025700: 3932 2c2d 3733 342e 3434 2038 3630 2e34 92,-734.44 860.4\n+00025710: 2c2d 3737 352e 3239 2031 3130 342e 3331 ,-775.29 1104.31\n+00025720: 2c2d 3738 312e 3738 2031 3139 392e 3533 ,-781.78 1199.53\n+00025730: 2c2d 3738 322e 3734 222f 3e0a 3c70 6f6c ,-782.74\"/>.<pol\n+00025740: 7967 6f6e 2066 696c 6c3d 2223 6266 6266 ygon fill=\"#bfbf\n+00025750: 6266 2220 7374 726f 6b65 3d22 2362 6662 bf\" stroke=\"#bfb\n+00025760: 6662 6622 2070 6f69 6e74 733d 2231 3139 fbf\" points=\"119\n+00025770: 392e 3536 2c2d 3738 362e 3234 2031 3230 9.56,-786.24 120\n+00025780: 392e 3539 2c2d 3738 322e 3833 2031 3139 9.59,-782.83 119\n+00025790: 392e 3632 2c2d 3737 392e 3234 2031 3139 9.62,-779.24 119\n+000257a0: 392e 3536 2c2d 3738 362e 3234 222f 3e0a 9.56,-786.24\"/>.\n+000257b0: 3c2f 673e 0a3c 212d 2d20 6d6f 6475 6c65 </g>.<!-- module\n+000257c0: 5f73 7263 5f67 726f 6d61 6373 5f74 6173 _src_gromacs_tas\n+000257d0: 6b61 7373 6967 6e6d 656e 7426 2334 353b kassignment-\n+000257e0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+000257f0: 726f 6d61 6373 5f6d 6474 7970 6573 202d romacs_mdtypes -\n+00025800: 2d3e 0a3c 6720 6964 3d22 6564 6765 3235 ->.<g id=\"edge25\n+00025810: 3022 2063 6c61 7373 3d22 6564 6765 223e 0\" class=\"edge\">\n+00025820: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+00025830: 7263 5f67 726f 6d61 6373 5f74 6173 6b61 rc_gromacs_taska\n+00025840: 7373 6967 6e6d 656e 7426 2334 353b 2667 ssignment-&g\n+00025850: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00025860: 6d61 6373 5f6d 6474 7970 6573 3c2f 7469 macs_mdtypes</ti\n+00025870: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n+00025880: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n+00025890: 6266 6266 6266 2220 643d 224d 3637 342e bfbfbf\" d=\"M674.\n+000258a0: 3931 2c2d 3432 302e 3231 4336 3637 2e33 91,-420.21C667.3\n+000258b0: 392c 2d34 3730 2e30 3920 3634 372e 3238 9,-470.09 647.28\n+000258c0: 2c2d 3635 352e 3433 2037 3438 2c2d 3733 ,-655.43 748,-73\n+000258d0: 342e 3434 2038 3232 2e37 2c2d 3739 332e 4.44 822.7,-793.\n+000258e0: 3034 2039 3331 2e39 382c 2d38 3233 2e39 04 931.98,-823.9\n+000258f0: 3920 3939 312e 352c 2d38 3337 2e33 3922 9 991.5,-837.39\"\n+00025900: 2f3e 0a3c 706f 6c79 676f 6e20 6669 6c6c />.<polygon fill\n+00025910: 3d22 2362 6662 6662 6622 2073 7472 6f6b =\"#bfbfbf\" strok\n+00025920: 653d 2223 6266 6266 6266 2220 706f 696e e=\"#bfbfbf\" poin\n+00025930: 7473 3d22 3939 302e 382c 2d38 3430 2e38 ts=\"990.8,-840.8\n+00025940: 3220 3130 3031 2e33 322c 2d38 3339 2e35 2 1001.32,-839.5\n+00025950: 3420 3939 322e 332c 2d38 3333 2e39 3820 4 992.3,-833.98 \n+00025960: 3939 302e 382c 2d38 3430 2e38 3222 2f3e 990.8,-840.82\"/>\n+00025970: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n+00025980: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n+00025990: 736b 6173 7369 676e 6d65 6e74 2623 3435 skassignment-\n+000259a0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+000259b0: 6772 6f6d 6163 735f 646f 6d64 6563 202d gromacs_domdec -\n+000259c0: 2d3e 0a3c 6720 6964 3d22 6564 6765 3235 ->.<g id=\"edge25\n+000259d0: 3122 2063 6c61 7373 3d22 6564 6765 223e 1\" class=\"edge\">\n+000259e0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+000259f0: 7263 5f67 726f 6d61 6373 5f74 6173 6b61 rc_gromacs_taska\n+00025a00: 7373 6967 6e6d 656e 7426 2334 353b 2667 ssignment-&g\n+00025a10: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n+00025a20: 6d61 6373 5f64 6f6d 6465 633c 2f74 6974 macs_domdec</tit\n+00025a30: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+00025a40: 6e6f 6e65 2220 7374 726f 6b65 3d22 2332 none\" stroke=\"#2\n+00025a50: 3832 6663 6322 2073 7472 6f6b 652d 6461 82fcc\" stroke-da\n+00025a60: 7368 6172 7261 793d 2235 2c32 2220 643d sharray=\"5,2\" d=\n+00025a70: 224d 3636 352e 3535 2c2d 3339 332e 3334 \"M665.55,-393.34\n+00025a80: 4336 3435 2e35 362c 2d33 3731 2e38 3320 C645.56,-371.83 \n+00025a90: 3630 342e 3133 2c2d 3332 372e 3235 2035 604.13,-327.25 5\n+00025aa0: 3830 2e31 382c 2d33 3031 2e34 3722 2f3e 80.18,-301.47\"/>\n+00025ab0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .<polygon fill=\"\n+00025ac0: 2332 3832 6663 6322 2073 7472 6f6b 653d #282fcc\" stroke=\n+00025ad0: 2223 3238 3266 6363 2220 706f 696e 7473 \"#282fcc\" points\n+00025ae0: 3d22 3538 322e 3433 2c2d 3239 382e 3736 =\"582.43,-298.76\n+00025af0: 2035 3733 2e30 362c 2d32 3933 2e38 3220 573.06,-293.82 \n+00025b00: 3537 372e 3331 2c2d 3330 332e 3533 2035 577.31,-303.53 5\n+00025b10: 3832 2e34 332c 2d32 3938 2e37 3622 2f3e 82.43,-298.76\"/>\n+00025b20: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n+00025b30: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n+00025b40: 736b 6173 7369 676e 6d65 6e74 2623 3435 skassignment-\n+00025b50: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00025b60: 6772 6f6d 6163 735f 6577 616c 6420 2d2d gromacs_ewald --\n+00025b70: 3e0a 3c67 2069 643d 2265 6467 6532 3437 >.<g id=\"edge247\n+00025b80: 2220 636c 6173 733d 2265 6467 6522 3e0a \" class=\"edge\">.\n+00025b90: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 <title>module_sr\n+00025ba0: 635f 6772 6f6d 6163 735f 7461 736b 6173 c_gromacs_taskas\n+00025bb0: 7369 676e 6d65 6e74 2623 3435 3b26 6774 signment->\n+00025bc0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+00025bd0: 6163 735f 6577 616c 643c 2f74 6974 6c65 acs_ewald</title\n 00025be0: 3e0a 3c70 6174 6820 6669 6c6c 3d22 6e6f >.<path fill=\"no\n-00025bf0: 6e65 2220 7374 726f 6b65 3d22 2362 6662 ne\" stroke=\"#bfb\n-00025c00: 6662 6622 2064 3d22 4d31 3639 372e 3031 fbf\" d=\"M1697.01\n-00025c10: 2c2d 3432 302e 3132 4331 3730 382e 332c ,-420.12C1708.3,\n-00025c20: 2d34 3335 2e34 3620 3137 3238 2e35 342c -435.46 1728.54,\n-00025c30: 2d34 3632 2e30 3320 3137 3438 2c2d 3438 -462.03 1748,-48\n-00025c40: 322e 3936 2031 3736 342e 3036 2c2d 3530 2.96 1764.06,-50\n-00025c50: 302e 3234 2031 3737 302e 3235 2c2d 3530 0.24 1770.25,-50\n-00025c60: 322e 3335 2031 3738 372c 2d35 3138 2e39 2.35 1787,-518.9\n-00025c70: 3620 3137 3930 2e34 2c2d 3532 322e 3333 6 1790.4,-522.33\n-00025c80: 2031 3834 332e 3237 2c2d 3537 372e 3839 1843.27,-577.89\n-00025c90: 2031 3834 362c 2d35 3831 2e38 3320 3138 1846,-581.83 18\n-00025ca0: 3936 2e36 362c 2d36 3534 2e39 3520 3139 96.66,-654.95 19\n-00025cb0: 3030 2e36 342c 2d36 3832 2e33 3520 3139 00.64,-682.35 19\n-00025cc0: 3133 2c2d 3737 302e 3434 2031 3931 382e 13,-770.44 1918.\n-00025cd0: 3534 2c2d 3830 392e 3934 2031 3933 392e 54,-809.94 1939.\n-00025ce0: 3339 2c2d 3833 302e 3237 2031 3931 332c 39,-830.27 1913,\n-00025cf0: 2d38 3630 2e31 3820 3139 3037 2e33 2c2d -860.18 1907.3,-\n-00025d00: 3836 362e 3634 2031 3636 352e 3432 2c2d 866.64 1665.42,-\n-00025d10: 3839 332e 3538 2031 3536 372e 3531 2c2d 893.58 1567.51,-\n-00025d20: 3930 342e 3234 222f 3e0a 3c70 6f6c 7967 904.24\"/>.<polyg\n-00025d30: 6f6e 2066 696c 6c3d 2223 6266 6266 6266 on fill=\"#bfbfbf\n-00025d40: 2220 7374 726f 6b65 3d22 2362 6662 6662 \" stroke=\"#bfbfb\n-00025d50: 6622 2070 6f69 6e74 733d 2231 3536 362e f\" points=\"1566.\n-00025d60: 3936 2c2d 3930 302e 3738 2031 3535 372e 96,-900.78 1557.\n-00025d70: 342c 2d39 3035 2e33 3420 3135 3637 2e37 4,-905.34 1567.7\n-00025d80: 322c 2d39 3037 2e37 3420 3135 3636 2e39 2,-907.74 1566.9\n-00025d90: 362c 2d39 3030 2e37 3822 2f3e 0a3c 2f67 6,-900.78\"/>.</g\n-00025da0: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n-00025db0: 635f 6772 6f6d 6163 735f 7461 736b 6173 c_gromacs_taskas\n-00025dc0: 7369 676e 6d65 6e74 2623 3435 3b26 6774 signment->\n-00025dd0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n-00025de0: 6163 735f 6861 7264 7761 7265 202d 2d3e acs_hardware -->\n-00025df0: 0a3c 6720 6964 3d22 6564 6765 3235 3322 .<g id=\"edge253\"\n-00025e00: 2063 6c61 7373 3d22 6564 6765 223e 0a3c class=\"edge\">.<\n-00025e10: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-00025e20: 5f67 726f 6d61 6373 5f74 6173 6b61 7373 _gromacs_taskass\n-00025e30: 6967 6e6d 656e 7426 2334 353b 2667 743b ignment->\n-00025e40: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00025e50: 6373 5f68 6172 6477 6172 653c 2f74 6974 cs_hardware</tit\n-00025e60: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n-00025e70: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n-00025e80: 6662 6662 6622 2064 3d22 4d31 3731 362e fbfbf\" d=\"M1716.\n-00025e90: 3633 2c2d 3431 382e 3635 4331 3733 372e 63,-418.65C1737.\n-00025ea0: 3933 2c2d 3432 372e 3431 2031 3736 372e 93,-427.41 1767.\n-00025eb0: 3239 2c2d 3434 302e 3732 2031 3739 312c 29,-440.72 1791,\n-00025ec0: 2d34 3536 2e30 3920 3138 3236 2e39 332c -456.09 1826.93,\n-00025ed0: 2d34 3739 2e33 3920 3138 3333 2e32 312c -479.39 1833.21,\n-00025ee0: 2d34 3839 2e32 2031 3836 342c 2d35 3138 -489.2 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3037 352e 3832 2032 3033 302e 342c -1075.82 2030.4,\n-00025fe0: 2d31 3037 342e 3134 222f 3e0a 3c2f 673e -1074.14\"/>.</g>\n-00025ff0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 .<!-- module_src\n-00026000: 5f67 726f 6d61 6373 5f74 6173 6b61 7373 _gromacs_taskass\n-00026010: 6967 6e6d 656e 7426 2334 353b 2667 743b ignment->\n-00026020: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00026030: 6373 5f6d 646c 6962 202d 2d3e 0a3c 6720 cs_mdlib -->.<g \n-00026040: 6964 3d22 6564 6765 3234 3922 2063 6c61 id=\"edge249\" cla\n-00026050: 7373 3d22 6564 6765 223e 0a3c 7469 746c ss=\"edge\">.<titl\n-00026060: 653e 6d6f 6475 6c65 5f73 7263 5f67 726f e>module_src_gro\n-00026070: 6d61 6373 5f74 6173 6b61 7373 6967 6e6d macs_taskassignm\n-00026080: 656e 7426 2334 353b 2667 743b 6d6f 6475 ent->modu\n-00026090: 6c65 5f73 7263 5f67 726f 6d61 6373 5f6d le_src_gromacs_m\n-000260a0: 646c 6962 3c2f 7469 746c 653e 0a3c 7061 dlib......\n-000262b0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-000262c0: 6373 5f74 6173 6b61 7373 6967 6e6d 656e cs_taskassignmen\n-000262d0: 7426 2334 353b 2667 743b 6d6f 6475 6c65 t->module\n-000262e0: 5f73 7263 5f67 726f 6d61 6373 5f6d 6474 _src_gromacs_mdt\n-000262f0: 7970 6573 3c2f 7469 746c 653e 0a3c 7061 ypes.....\n-000264b0: 3c67 2069 643d 2265 6467 6532 3531 2220 .module_src_\n-000264e0: 6772 6f6d 6163 735f 7461 736b 6173 7369 gromacs_taskassi\n-000264f0: 676e 6d65 6e74 2623 3435 3b26 6774 3b6d gnment->m\n-00026500: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00026510: 735f 646f 6d64 6563 3c2f 7469 746c 653e s_domdec\n-00026520: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......module_src_grom\n-00026b30: 6163 735f 7461 736b 6173 7369 676e 6d65 acs_taskassignme\n-00026b40: 6e74 2623 3435 3b26 6774 3b6d 6f64 756c nt->modul\n-00026b50: 655f 7372 635f 6772 6f6d 6163 735f 6770 e_src_gromacs_gp\n-00026b60: 755f 7574 696c 733c 2f74 6974 6c65 3e0a u_utils.\n-00026b70: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .....module_src_grom\n-00026d70: 6163 735f 7461 736b 6173 7369 676e 6d65 acs_taskassignme\n-00026d80: 6e74 2623 3435 3b26 6774 3b6d 6f64 756c nt->modul\n-00026d90: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-00026da0: 7275 6e75 7469 6c69 7479 3c2f 7469 746c runutility......\n-00026fa0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-00026fb0: 6373 5f72 6573 7472 6169 6e74 2623 3435 cs_restraint-\n-00026fc0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00026fd0: 6772 6f6d 6163 735f 676d 786c 6962 3c2f gromacs_gmxlib</\n-00026fe0: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n-00026ff0: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n-00027000: 2223 6266 6266 6266 2220 643d 224d 3234 \"#bfbfbf\" d=\"M24\n-00027010: 3135 2e34 372c 2d31 3638 2e36 3143 3234 15.47,-168.61C24\n-00027020: 3236 2e36 342c 2d32 3039 2e33 3920 3234 26.64,-209.39 24\n-00027030: 3631 2e36 312c 2d33 3432 2e39 3520 3234 61.61,-342.95 24\n-00027040: 3733 2c2d 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5f67 726f 6d61 6373 5f6d 6474 _src_gromacs_mdt\n-00027220: 7970 6573 3c2f 7469 746c 653e 0a3c 7061 ypes..<\n-000272f0: 706f 6c79 676f 6e20 6669 6c6c 3d22 2362 polygon fill=\"#b\n-00027300: 6662 6662 6622 2073 7472 6f6b 653d 2223 fbfbf\" stroke=\"#\n-00027310: 6266 6266 6266 2220 706f 696e 7473 3d22 bfbfbf\" points=\"\n-00027320: 3137 3636 2e32 372c 2d38 3339 2e39 3520 1766.27,-839.95 \n-00027330: 3137 3536 2e35 2c2d 3834 342e 3037 2031 1756.5,-844.07 1\n-00027340: 3736 362e 372c 2d38 3436 2e39 3420 3137 766.7,-846.94 17\n-00027350: 3636 2e32 372c 2d38 3339 2e39 3522 2f3e 66.27,-839.95\"/>\n-00027360: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....module_src_gr\n-000273e0: 6f6d 6163 735f 7265 7374 7261 696e 7426 omacs_restraint&\n-000273f0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-00027400: 7263 5f67 726f 6d61 6373 5f64 6f6d 6465 rc_gromacs_domde\n-00027410: 633c 2f74 6974 6c65 3e0a 3c70 6174 6820 c....<\n-00027510: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n-00027520: 726f 6d61 6373 5f6d 6472 756e 7574 696c romacs_mdrunutil\n-00027530: 6974 7926 2334 353b 2667 743b 6d6f 6475 ity->modu\n-00027540: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n-00027550: 6d78 6c69 6220 2d2d 3e0a 3c67 2069 643d mxlib -->..m\n-00027580: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00027590: 735f 6d64 7275 6e75 7469 6c69 7479 2623 s_mdrunutility&#\n-000275a0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-000275b0: 635f 6772 6f6d 6163 735f 676d 786c 6962 c_gromacs_gmxlib\n-000275c0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ..\n-000276d0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ..\n-000278f0: 0a3c 6720 6964 3d22 6564 6765 3236 3022 ..<\n-00027910: 7469 746c 653e 6d6f 6475 6c65 5f73 7263 title>module_src\n-00027920: 5f67 726f 6d61 6373 5f6d 6472 756e 7574 _gromacs_mdrunut\n-00027930: 696c 6974 7926 2334 353b 2667 743b 6d6f ility->mo\n-00027940: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n-00027950: 5f66 696c 6569 6f3c 2f74 6974 6c65 3e0a _fileio.\n-00027960: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .\n-00027a20: 3c70 6f6c 7967 6f6e 2066 696c 6c3d 2223 ....module\n-00027b10: 5f73 7263 5f67 726f 6d61 6373 5f6d 6472 _src_gromacs_mdr\n-00027b20: 756e 7574 696c 6974 7926 2334 353b 2667 unutility-&g\n-00027b30: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-00027b40: 6d61 6373 5f6d 6474 7970 6573 3c2f 7469 macs_mdtypes</ti\n-00027b50: 746c 653e 0a3c 7061 7468 2066 696c 6c3d tle>.<path fill=\n-00027b60: 226e 6f6e 6522 2073 7472 6f6b 653d 2223 \"none\" stroke=\"#\n-00027b70: 6266 6266 6266 2220 643d 224d 3136 3834 bfbfbf\" d=\"M1684\n-00027b80: 2e30 312c 2d36 3731 2e37 3643 3136 3837 .01,-671.76C1687\n-00027b90: 2e39 342c 2d36 3936 2e31 3320 3136 3937 .94,-696.13 1697\n-00027ba0: 2e31 352c 2d37 3531 2e33 2031 3730 372c .15,-751.3 1707,\n-00027bb0: 2d37 3937 2e33 3120 3137 3038 2e38 322c -797.31 1708.82,\n-00027bc0: 2d38 3035 2e37 3920 3137 3131 2e30 352c -805.79 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2265 6467 6532 3634 2220 636c id=\"edge264\" cl\n-00027cc0: 6173 733d 2265 6467 6522 3e0a 3c74 6974 ass=\"edge\">.<tit\n-00027cd0: 6c65 3e6d 6f64 756c 655f 7372 635f 6772 le>module_src_gr\n-00027ce0: 6f6d 6163 735f 6d64 7275 6e75 7469 6c69 omacs_mdrunutili\n-00027cf0: 7479 2623 3435 3b26 6774 3b6d 6f64 756c ty->modul\n-00027d00: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n-00027d10: 7275 6e3c 2f74 6974 6c65 3e0a 3c70 6174 run..<\n-00027e60: 706f 6c79 676f 6e20 6669 6c6c 3d22 7265 polygon fill=\"re\n-00027e70: 6422 2073 7472 6f6b 653d 2272 6564 2220 d\" stroke=\"red\" \n-00027e80: 706f 696e 7473 3d22 3134 3837 2e38 342c points=\"1487.84,\n-00027e90: 2d32 3330 2e31 3220 3134 3737 2e33 352c -230.12 1477.35,\n-00027ea0: 2d32 3238 2e36 3220 3134 3834 2e36 312c -228.62 1484.61,\n-00027eb0: 2d32 3336 2e33 3420 3134 3837 2e38 342c -236.34 1487.84,\n-00027ec0: 2d32 3330 2e31 3222 2f3e 0a3c 2f67 3e0a -230.12\"/>..\n-00027ed0: 3c21 2d2d 206d 6f64 756c 655f 7372 635f .\n-00027f20: 3c67 2069 643d 2265 6467 6532 3539 2220 .module_src_\n-00027f50: 6772 6f6d 6163 735f 6d64 7275 6e75 7469 gromacs_mdrunuti\n-00027f60: 6c69 7479 2623 3435 3b26 6774 3b6d 6f64 lity->mod\n-00027f70: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00027f80: 636f 6d6d 616e 646c 696e 653c 2f74 6974 commandline......mod\n-00028100: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n-00028110: 6170 706c 6965 645f 666f 7263 6573 5f61 applied_forces_a\n-00028120: 7768 2623 3435 3b26 6774 3b6d 6f64 756c wh->modul\n-00028130: 655f 7372 635f 6772 6f6d 6163 735f 676d e_src_gromacs_gm\n-00028140: 786c 6962 3c2f 7469 746c 653e 0a3c 7061 xlib.....<\n-000282f0: 6720 6964 3d22 6564 6765 3237 3522 2063 g id=\"edge275\" c\n-00028300: 6c61 7373 3d22 6564 6765 223e 0a3c 7469 lass=\"edge\">.module_src_g\n-00028320: 726f 6d61 6373 5f61 7070 6c69 6564 5f66 romacs_applied_f\n-00028330: 6f72 6365 735f 6177 6826 2334 353b 2667 orces_awh-&g\n-00028340: 743b 6d6f 6475 6c65 5f73 7263 5f67 726f t;module_src_gro\n-00028350: 6d61 6373 5f74 7261 6a65 6374 6f72 793c macs_trajectory<\n-00028360: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>......module_\n-000284c0: 7372 635f 6772 6f6d 6163 735f 6170 706c src_gromacs_appl\n-000284d0: 6965 645f 666f 7263 6573 5f61 7768 2623 ied_forces_awh&#\n-000284e0: 3435 3b26 6774 3b6d 6f64 756c 655f 7372 45;>module_sr\n-000284f0: 635f 6772 6f6d 6163 735f 6669 6c65 696f c_gromacs_fileio\n-00028500: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 .\n-000285e0: 0a3c 706f 6c79 676f 6e20 6669 6c6c 3d22 .....module_src_grom\n-000286e0: 6163 735f 6170 706c 6965 645f 666f 7263 acs_applied_forc\n-000286f0: 6573 5f61 7768 2623 3435 3b26 6774 3b6d es_awh->m\n-00028700: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00028710: 735f 6d64 7479 7065 733c 2f74 6974 6c65 s_mdtypes...<\n-00028910: 2f67 3e0a 3c21 2d2d 206d 6f64 756c 655f /g>...module\n-00028990: 5f73 7263 5f67 726f 6d61 6373 5f61 7070 _src_gromacs_app\n-000289a0: 6c69 6564 5f66 6f72 6365 735f 6177 6826 lied_forces_awh&\n-000289b0: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-000289c0: 7263 5f67 726f 6d61 6373 5f6d 6473 7061 rc_gromacs_mdspa\n-000289d0: 6e3c 2f74 6974 6c65 3e0a 3c70 6174 6820 n......module_src_grom\n-00028b70: 6163 735f 6170 706c 6965 645f 666f 7263 acs_applied_forc\n-00028b80: 6573 5f61 7768 2623 3435 3b26 6774 3b6d es_awh->m\n-00028b90: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00028ba0: 735f 7261 6e64 6f6d 3c2f 7469 746c 653e s_random\n-00028bb0: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ......module\n-00028d50: 5f73 7263 5f67 726f 6d61 6373 5f61 7070 _src_gromacs_app\n-00028d60: 6c69 6564 5f66 6f72 6365 735f 6177 6826 lied_forces_awh&\n-00028d70: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n-00028d80: 7263 5f67 726f 6d61 6373 5f6d 6472 756e rc_gromacs_mdrun\n-00028d90: 7574 696c 6974 793c 2f74 6974 6c65 3e0a utility.\n-00028da0: 3c70 6174 6820 6669 6c6c 3d22 6e6f 6e65 .....module_src_tes\n-00028f60: 7475 7469 6c73 2623 3435 3b26 6774 3b6d tutils->m\n-00028f70: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n-00028f80: 735f 6861 7264 7761 7265 3c2f 7469 746c s_hardware......\n-000290d0: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n-000290e0: 635f 7465 7374 7574 696c 7326 2334 353b c_testutils-\n-000290f0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n-00029100: 726f 6d61 6373 5f6f 6e6c 696e 6568 656c romacs_onlinehel\n-00029110: 703c 2f74 6974 6c65 3e0a 3c70 6174 6820 p......mo\n-00029330: 6475 6c65 5f73 7263 5f74 6573 7475 7469 dule_src_testuti\n-00029340: 6c73 2623 3435 3b26 6774 3b6d 6f64 756c ls->modul\n-00029350: 655f 7372 635f 6772 6f6d 6163 735f 676d e_src_gromacs_gm\n-00029360: 7870 7265 7072 6f63 6573 733c 2f74 6974 xpreprocess</tit\n-00029370: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n-00029380: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n-00029390: 6662 6662 6622 2064 3d22 4d32 3731 322e fbfbf\" d=\"M2712.\n-000293a0: 3933 2c2d 3131 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44.39\"/>.</g>.<!\n-00029490: 2d2d 206d 6f64 756c 655f 7372 635f 7465 -- module_src_te\n-000294a0: 7374 7574 696c 7326 2334 353b 2667 743b stutils->\n-000294b0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n-000294c0: 6373 5f63 6f6d 6d61 6e64 6c69 6e65 202d cs_commandline -\n-000294d0: 2d3e 0a3c 6720 6964 3d22 6564 6765 3236 ->.<g id=\"edge26\n-000294e0: 3522 2063 6c61 7373 3d22 6564 6765 223e 5\" class=\"edge\">\n-000294f0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n-00029500: 7263 5f74 6573 7475 7469 6c73 2623 3435 rc_testutils-\n-00029510: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n-00029520: 6772 6f6d 6163 735f 636f 6d6d 616e 646c gromacs_commandl\n-00029530: 696e 653c 2f74 6974 6c65 3e0a 3c70 6174 ine......m\n-00029720: 6f64 756c 655f 7372 635f 7465 7374 7574 odule_src_testut\n-00029730: 696c 7326 2334 353b 2667 743b 6d6f 6475 ils->modu\n-00029740: 6c65 5f73 7263 5f67 726f 6d61 6373 5f67 le_src_gromacs_g\n-00029750: 7075 5f75 7469 6c73 3c2f 7469 746c 653e pu_utils\n-00029760: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ...\n-00029890: 0a3c 2f67 3e0a 3c2f 7376 673e 0a ...\n+00025bf0: 6e65 2220 7374 726f 6b65 3d22 2332 3832 ne\" stroke=\"#282\n+00025c00: 6663 6322 2064 3d22 4d36 3531 2e35 392c fcc\" d=\"M651.59,\n+00025c10: 2d33 3934 2e34 4335 3837 2e38 392c 2d33 -394.4C587.89,-3\n+00025c20: 3635 2e31 3620 3431 392c 2d32 3831 2e31 65.16 419,-281.1\n+00025c30: 3620 3331 342c 2d31 3638 2e36 3120 3330 6 314,-168.61 30\n+00025c40: 342e 3637 2c2d 3135 382e 3631 2033 3038 4.67,-158.61 308\n+00025c50: 2e39 382c 2d31 3531 2e30 3920 3239 392c .98,-151.09 299,\n+00025c60: 2d31 3431 2e37 3420 3237 392e 362c 2d31 -141.74 279.6,-1\n+00025c70: 3233 2e35 3820 3235 322e 3136 2c2d 3131 23.58 252.16,-11\n+00025c80: 312e 3037 2032 3330 2e36 322c 2d31 3033 1.07 230.62,-103\n+00025c90: 2e33 3222 2f3e 0a3c 706f 6c79 676f 6e20 .32\"/>.....\n+00025d80: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00025d90: 6373 5f74 6173 6b61 7373 6967 6e6d 656e cs_taskassignmen\n+00025da0: 7426 2334 353b 2667 743b 6d6f 6475 6c65 t->module\n+00025db0: 5f73 7263 5f67 726f 6d61 6373 5f6c 6973 _src_gromacs_lis\n+00025dc0: 7465 645f 666f 7263 6573 3c2f 7469 746c ted_forces</titl\n+00025dd0: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+00025de0: 6f6e 6522 2073 7472 6f6b 653d 2223 3238 one\" stroke=\"#28\n+00025df0: 3266 6363 2220 7374 726f 6b65 2d64 6173 2fcc\" stroke-das\n+00025e00: 6861 7272 6179 3d22 352c 3222 2064 3d22 harray=\"5,2\" d=\"\n+00025e10: 4d37 3333 2e35 332c 2d34 3031 2e35 3543 M733.53,-401.55C\n+00025e20: 3930 322e 3737 2c2d 3338 382e 3331 2031 902.77,-388.31 1\n+00025e30: 3431 392e 3239 2c2d 3334 312e 3131 2031 419.29,-341.11 1\n+00025e40: 3833 332c 2d32 3331 2e34 3820 3138 3931 833,-231.48 1891\n+00025e50: 2e36 312c 2d32 3135 2e39 3520 3139 3536 .61,-215.95 1956\n+00025e60: 2e37 372c 2d31 3838 2e36 3220 3139 3934 .77,-188.62 1994\n+00025e70: 2e39 372c 2d31 3731 2e35 222f 3e0a 3c70 .97,-171.5\"/>.<p\n+00025e80: 6f6c 7967 6f6e 2066 696c 6c3d 2223 3238 olygon fill=\"#28\n+00025e90: 3266 6363 2220 7374 726f 6b65 3d22 2332 2fcc\" stroke=\"#2\n+00025ea0: 3832 6663 6322 2070 6f69 6e74 733d 2231 82fcc\" points=\"1\n+00025eb0: 3939 362e 3837 2c2d 3137 342e 3438 2032 996.87,-174.48 2\n+00025ec0: 3030 342e 3534 2c2d 3136 372e 3137 2031 004.54,-167.17 1\n+00025ed0: 3939 332e 3939 2c2d 3136 382e 3120 3139 993.99,-168.1 19\n+00025ee0: 3936 2e38 372c 2d31 3734 2e34 3822 2f3e 96.87,-174.48\"/>\n+00025ef0: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c .</g>.<!-- modul\n+00025f00: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n+00025f10: 736b 6173 7369 676e 6d65 6e74 2623 3435 skassignment-\n+00025f20: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00025f30: 6772 6f6d 6163 735f 6770 755f 7574 696c gromacs_gpu_util\n+00025f40: 7320 2d2d 3e0a 3c67 2069 643d 2265 6467 s -->.<g id=\"edg\n+00025f50: 6532 3535 2220 636c 6173 733d 2265 6467 e255\" class=\"edg\n+00025f60: 6522 3e0a 3c74 6974 6c65 3e6d 6f64 756c e\">.<title>modul\n+00025f70: 655f 7372 635f 6772 6f6d 6163 735f 7461 e_src_gromacs_ta\n+00025f80: 736b 6173 7369 676e 6d65 6e74 2623 3435 skassignment-\n+00025f90: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+00025fa0: 6772 6f6d 6163 735f 6770 755f 7574 696c gromacs_gpu_util\n+00025fb0: 733c 2f74 6974 6c65 3e0a 3c70 6174 6820 s....<\n+00026130: 212d 2d20 6d6f 6475 6c65 5f73 7263 5f67 !-- module_src_g\n+00026140: 726f 6d61 6373 5f74 6173 6b61 7373 6967 romacs_taskassig\n+00026150: 6e6d 656e 7426 2334 353b 2667 743b 6d6f nment->mo\n+00026160: 6475 6c65 5f73 7263 5f67 726f 6d61 6373 dule_src_gromacs\n+00026170: 5f6d 6472 756e 7574 696c 6974 7920 2d2d _mdrunutility --\n+00026180: 3e0a 3c67 2069 643d 2265 6467 6532 3534 >..\n+000261a0: 3c74 6974 6c65 3e6d 6f64 756c 655f 7372 module_sr\n+000261b0: 635f 6772 6f6d 6163 735f 7461 736b 6173 c_gromacs_taskas\n+000261c0: 7369 676e 6d65 6e74 2623 3435 3b26 6774 signment->\n+000261d0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+000261e0: 6163 735f 6d64 7275 6e75 7469 6c69 7479 acs_mdrunutility\n+000261f0: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......\n+00026380: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00026390: 6373 5f72 6573 7472 6169 6e74 2623 3435 cs_restraint-\n+000263a0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+000263b0: 6772 6f6d 6163 735f 676d 786c 6962 3c2f gromacs_gmxlib</\n+000263c0: 7469 746c 653e 0a3c 7061 7468 2066 696c title>.<path fil\n+000263d0: 6c3d 226e 6f6e 6522 2073 7472 6f6b 653d l=\"none\" stroke=\n+000263e0: 2223 6266 6266 6266 2220 643d 224d 3233 \"#bfbfbf\" d=\"M23\n+000263f0: 392e 3431 2c2d 3136 382e 3032 4332 3137 9.41,-168.02C217\n+00026400: 2e35 352c 2d31 3838 2e34 3820 3137 372c .55,-188.48 177,\n+00026410: 2d32 3332 2e37 3720 3137 372c 2d32 3739 -232.77 177,-279\n+00026420: 2e39 3220 3137 372c 2d37 3834 2e38 3820 .92 177,-784.88 \n+00026430: 3137 372c 2d37 3834 2e38 3820 3137 372c 177,-784.88 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735f 7265 7374 7261 696e 7426 omacs_restraint&\n+00026530: 2334 353b 2667 743b 6d6f 6475 6c65 5f73 #45;>module_s\n+00026540: 7263 5f67 726f 6d61 6373 5f6d 6474 7970 rc_gromacs_mdtyp\n+00026550: 6573 202d 2d3e 0a3c 6720 6964 3d22 6564 es -->.<g id=\"ed\n+00026560: 6765 3235 3622 2063 6c61 7373 3d22 6564 ge256\" class=\"ed\n+00026570: 6765 223e 0a3c 7469 746c 653e 6d6f 6475 ge\">.<title>modu\n+00026580: 6c65 5f73 7263 5f67 726f 6d61 6373 5f72 le_src_gromacs_r\n+00026590: 6573 7472 6169 6e74 2623 3435 3b26 6774 estraint->\n+000265a0: 3b6d 6f64 756c 655f 7372 635f 6772 6f6d ;module_src_grom\n+000265b0: 6163 735f 6d64 7479 7065 733c 2f74 6974 acs_mdtypes</tit\n+000265c0: 6c65 3e0a 3c70 6174 6820 6669 6c6c 3d22 le>.<path fill=\"\n+000265d0: 6e6f 6e65 2220 7374 726f 6b65 3d22 2362 none\" stroke=\"#b\n+000265e0: 6662 6662 6622 2064 3d22 4d32 3530 2e32 fbfbf\" d=\"M250.2\n+000265f0: 392c 2d31 3638 2e37 3543 3234 352e 3732 9,-168.75C245.72\n+00026600: 2c2d 3139 312e 3034 2032 3337 2c2d 3233 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rc_gromacs_mdrun\n+00026a90: 7574 696c 6974 7926 2334 353b 2667 743b utility->\n+00026aa0: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+00026ab0: 6373 5f68 6172 6477 6172 6520 2d2d 3e0a cs_hardware -->.\n+00026ac0: 3c67 2069 643d 2265 6467 6532 3633 2220 <g id=\"edge263\" \n+00026ad0: 636c 6173 733d 2265 6467 6522 3e0a 3c74 class=\"edge\">.<t\n+00026ae0: 6974 6c65 3e6d 6f64 756c 655f 7372 635f itle>module_src_\n+00026af0: 6772 6f6d 6163 735f 6d64 7275 6e75 7469 gromacs_mdrunuti\n+00026b00: 6c69 7479 2623 3435 3b26 6774 3b6d 6f64 lity->mod\n+00026b10: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00026b20: 6861 7264 7761 7265 3c2f 7469 746c 653e hardware\n+00026b30: 0a3c 7061 7468 2066 696c 6c3d 226e 6f6e ...\n+00026c40: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 ...module_src_grom\n+00026cc0: 6163 735f 6d64 7275 6e75 7469 6c69 7479 acs_mdrunutility\n+00026cd0: 2623 3435 3b26 6774 3b6d 6f64 756c 655f ->module_\n+00026ce0: 7372 635f 6772 6f6d 6163 735f 6669 6c65 src_gromacs_file\n+00026cf0: 696f 3c2f 7469 746c 653e 0a3c 7061 7468 io..\n+00026e00: 0a3c 2f67 3e0a 3c21 2d2d 206d 6f64 756c ....module_src_gr\n+00027020: 6f6d 6163 735f 6d64 7275 6e75 7469 6c69 omacs_mdrunutili\n+00027030: 7479 2623 3435 3b26 6774 3b6d 6f64 756c ty->modul\n+00027040: 655f 7372 635f 6772 6f6d 6163 735f 6d64 e_src_gromacs_md\n+00027050: 7275 6e3c 2f74 6974 6c65 3e0a 3c70 6174 run......m\n+00027650: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00027660: 735f 6170 706c 6965 645f 666f 7263 6573 s_applied_forces\n+00027670: 5f61 7768 2623 3435 3b26 6774 3b6d 6f64 _awh->mod\n+00027680: 756c 655f 7372 635f 6772 6f6d 6163 735f ule_src_gromacs_\n+00027690: 7472 616a 6563 746f 7279 3c2f 7469 746c trajectory</titl\n+000276a0: 653e 0a3c 7061 7468 2066 696c 6c3d 226e e>.<path fill=\"n\n+000276b0: 6f6e 6522 2073 7472 6f6b 653d 2223 6266 one\" stroke=\"#bf\n+000276c0: 6266 6266 2220 643d 224d 3233 3537 2e39 bfbf\" d=\"M2357.9\n+000276d0: 2c2d 3134 382e 3435 4332 3430 312e 3035 ,-148.45C2401.05\n+000276e0: 2c2d 3133 382e 3131 2032 3439 322e 352c ,-138.11 2492.5,\n+000276f0: 2d31 3136 2e31 3920 3235 3436 2e32 312c -116.19 2546.21,\n+00027700: 2d31 3033 2e33 3222 2f3e 0a3c 706f 6c79 -103.32\"/>.<poly\n+00027710: 676f 6e20 6669 6c6c 3d22 2362 6662 6662 gon fill=\"#bfbfb\n+00027720: 6622 2073 7472 6f6b 653d 2223 6266 6266 f\" stroke=\"#bfbf\n+00027730: 6266 2220 706f 696e 7473 3d22 3235 3437 bf\" points=\"2547\n+00027740: 2e31 392c 2d31 3036 2e36 3820 3235 3536 .19,-106.68 2556\n+00027750: 2e31 2c2d 3130 302e 3935 2032 3534 352e .1,-100.95 2545.\n+00027760: 3536 2c2d 3939 2e38 3820 3235 3437 2e31 56,-99.88 2547.1\n+00027770: 392c 2d31 3036 2e36 3822 2f3e 0a3c 2f67 9,-106.68\"/>.</g\n+00027780: 3e0a 3c21 2d2d 206d 6f64 756c 655f 7372 >.<!-- module_sr\n+00027790: 635f 6772 6f6d 6163 735f 6170 706c 6965 c_gromacs_applie\n+000277a0: 645f 666f 7263 6573 5f61 7768 2623 3435 d_forces_awh-\n+000277b0: 3b26 6774 3b6d 6f64 756c 655f 7372 635f ;>module_src_\n+000277c0: 6772 6f6d 6163 735f 6669 6c65 696f 202d gromacs_fileio -\n+000277d0: 2d3e 0a3c 6720 6964 3d22 6564 6765 3237 ->.<g id=\"edge27\n+000277e0: 3022 2063 6c61 7373 3d22 6564 6765 223e 0\" class=\"edge\">\n+000277f0: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+00027800: 7263 5f67 726f 6d61 6373 5f61 7070 6c69 rc_gromacs_appli\n+00027810: 6564 5f66 6f72 6365 735f 6177 6826 2334 ed_forces_awh\n+00027820: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00027830: 5f67 726f 6d61 6373 5f66 696c 6569 6f3c _gromacs_fileio<\n+00027840: 2f74 6974 6c65 3e0a 3c70 6174 6820 6669 /title>.<path fi\n+00027850: 6c6c 3d22 6e6f 6e65 2220 7374 726f 6b65 ll=\"none\" stroke\n+00027860: 3d22 2362 6662 6662 6622 2064 3d22 4d32 =\"#bfbfbf\" d=\"M2\n+00027870: 3333 322e 312c 2d31 3638 2e38 3143 3233 332.1,-168.81C23\n+00027880: 3236 2e39 342c 2d31 3738 2e32 3920 3233 26.94,-178.29 23\n+00027890: 3138 2e30 362c 2d31 3931 2e37 3920 3233 18.06,-191.79 23\n+000278a0: 3132 2c2d 3230 342e 3631 2032 3236 382e 12,-204.61 2268.\n+000278b0: 3935 2c2d 3239 352e 3634 2032 3239 392e 95,-295.64 2299.\n+000278c0: 3634 2c2d 3333 372e 3532 2032 3234 322c 64,-337.52 2242,\n+000278d0: 2d34 3230 2e30 3920 3232 3136 2e31 322c -420.09 2216.12,\n+000278e0: 2d34 3537 2e31 3720 3232 3034 2e31 392c -457.17 2204.19,\n+000278f0: 2d34 3636 2e36 3820 3231 3632 2c2d 3438 -466.68 2162,-48\n+00027900: 322e 3936 2032 3034 302e 3931 2c2d 3532 2.96 2040.91,-52\n+00027910: 392e 3639 2031 3633 302e 3731 2c2d 3533 9.69 1630.71,-53\n+00027920: 312e 3938 2031 3530 342e 3239 2c2d 3533 1.98 1504.29,-53\n+00027930: 312e 3631 222f 3e0a 3c70 6f6c 7967 6f6e 1.61\"/>.<polygon\n+00027940: 2066 696c 6c3d 2223 6266 6266 6266 2220 fill=\"#bfbfbf\" \n+00027950: 7374 726f 6b65 3d22 2362 6662 6662 6622 stroke=\"#bfbfbf\"\n+00027960: 2070 6f69 6e74 733d 2231 3530 332e 3939 points=\"1503.99\n+00027970: 2c2d 3532 382e 3131 2031 3439 332e 3938 ,-528.11 1493.98\n+00027980: 2c2d 3533 312e 3537 2031 3530 332e 3936 ,-531.57 1503.96\n+00027990: 2c2d 3533 352e 3131 2031 3530 332e 3939 ,-535.11 1503.99\n+000279a0: 2c2d 3532 382e 3131 222f 3e0a 3c2f 673e ,-528.11\"/>.</g>\n+000279b0: 0a3c 212d 2d20 6d6f 6475 6c65 5f73 7263 .<!-- module_src\n+000279c0: 5f67 726f 6d61 6373 5f61 7070 6c69 6564 _gromacs_applied\n+000279d0: 5f66 6f72 6365 735f 6177 6826 2334 353b _forces_awh-\n+000279e0: 2667 743b 6d6f 6475 6c65 5f73 7263 5f67 >module_src_g\n+000279f0: 726f 6d61 6373 5f6d 6474 7970 6573 202d romacs_mdtypes -\n+00027a00: 2d3e 0a3c 6720 6964 3d22 6564 6765 3237 ->.<g id=\"edge27\n+00027a10: 3322 2063 6c61 7373 3d22 6564 6765 223e 3\" class=\"edge\">\n+00027a20: 0a3c 7469 746c 653e 6d6f 6475 6c65 5f73 .<title>module_s\n+00027a30: 7263 5f67 726f 6d61 6373 5f61 7070 6c69 rc_gromacs_appli\n+00027a40: 6564 5f66 6f72 6365 735f 6177 6826 2334 ed_forces_awh\n+00027a50: 353b 2667 743b 6d6f 6475 6c65 5f73 7263 5;>module_src\n+00027a60: 5f67 726f 6d61 6373 5f6d 6474 7970 6573 _gromacs_mdtypes\n+00027a70: 3c2f 7469 746c 653e 0a3c 7061 7468 2066 ......module_src_te\n+00028280: 7374 7574 696c 7326 2334 353b 2667 743b stutils->\n+00028290: 6d6f 6475 6c65 5f73 7263 5f67 726f 6d61 module_src_groma\n+000282a0: 6373 5f68 6172 6477 6172 653c 2f74 6974 cs_hardware......module_src_tes\n+00028460: 7475 7469 6c73 2623 3435 3b26 6774 3b6d tutils->m\n+00028470: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+00028480: 735f 6f6e 6c69 6e65 6865 6c70 3c2f 7469 s_onlinehelp......module_src_tes\n+00028880: 7475 7469 6c73 2623 3435 3b26 6774 3b6d tutils->m\n+00028890: 6f64 756c 655f 7372 635f 6772 6f6d 6163 odule_src_gromac\n+000288a0: 735f 636f 6d6d 616e 646c 696e 653c 2f74 s_commandline....\n+00028a30: 3c21 2d2d 206d 6f64 756c 655f 7372 635f \n
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Module dependency graph
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The graph below shows the dependencies between the source code modules, computed from include statements in the code. For documented modules (those that do not have a gray background), clicking on the module takes you to the module documentation. Legend for the graph can be found below the graph.

\n
\n-
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\n

\n Legend

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The graph below annotates the colors and line styles used in the module dependency graph above. More detailed textual annotation is below the graph.

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Node colors:

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gray background
\n"}, {"source1": "./usr/share/doc/gromacs/html/manual-2025.2-Debian_2025.2_1.pdf", "source2": "./usr/share/doc/gromacs/html/manual-2025.2-Debian_2025.2_1.pdf", "unified_diff": null, "details": [{"source1": "pdftotext {} -", "source2": "pdftotext {} -", "unified_diff": "@@ -17659,15 +17659,15 @@\n Lindahl, Erik Marklund, Pieter Meulenhoff, Teemu Murtola, Sander Pronk, Alfons Sijbers, Balint Soproni, David\n van der Spoel, Peter Tieleman, Carsten Uphoff, Jon Vincent, Teemu Virolainen, Christian Wennberg, Maarten\n Wolf, Artem Zhmurov\n Project leaders: Berk Hess, Erik Lindahl\n \u00a9 1991 \u2013 2000:\n Department of Biophysical Chemistry, University of Groningen. Nijenborgh 4, 9747 AG Groningen,\n The Netherlands.\n-\u00a9 2001 \u2013 2025:\n+\u00a9 2001 \u2013 2026:\n The GROMACS development teams at the Royal Institute of Technology and Uppsala University,\n Sweden.\n This manual is not complete and has no pretension to be so, due to lack of time of the contributors \u2013 our first\n priority is to improve the software. It is worked on continuously, which in some cases might mean the information\n is not entirely correct.\n Comments on form and content are welcome, please send them to the user discussion forum or the developer\n discussion forum (see our webpage or this section on how to contribute (page 596)), or open an issue on our issue\n"}]}, {"source1": "./usr/share/doc/gromacs/html/reference-manual/preface.html", "source2": "./usr/share/doc/gromacs/html/reference-manual/preface.html", "has_internal_linenos": true, "unified_diff": "@@ -4466,15 +4466,15 @@\n 00011710: 7273 6974 7920 6f66 2047 726f 6e69 6e67 rsity of Groning\n 00011720: 656e 2e0a 4e69 6a65 6e62 6f72 6768 2034 en..Nijenborgh 4\n 00011730: 2c20 3937 3437 2041 4720 4772 6f6e 696e , 9747 AG Gronin\n 00011740: 6765 6e2c 2054 6865 204e 6574 6865 726c gen, The Netherl\n 00011750: 616e 6473 2e3c 2f70 3e0a 3c2f 6469 763e ands.

.
\n 00011760: 3c2f 626c 6f63 6b71 756f 7465 3e0a 3c70 ... 2001 ... 202\n-00011780: 353a 3c2f 703e 0a3c 626c 6f63 6b71 756f 5:

...

The \n 000117a0: 4752 4f4d 4143 5320 6465 7665 6c6f 706d GROMACS developm\n 000117b0: 656e 7420 7465 616d 7320 6174 2074 6865 ent teams at the\n 000117c0: 2052 6f79 616c 2049 6e73 7469 7475 7465 Royal Institute\n 000117d0: 206f 6620 5465 6368 6e6f 6c6f 6779 2061 of Technology a\n 000117e0: 6e64 0a55 7070 7361 6c61 2055 6e69 7665 nd.Uppsala Unive\n 000117f0: 7273 6974 792c 2053 7765 6465 6e2e 3c2f rsity, Sweden.