--- /srv/reproducible-results/rbuild-debian/r-b-build.jGQjWCYd/b1/mdanalysis_2.4.2+dfsg1-1_amd64.changes
+++ /srv/reproducible-results/rbuild-debian/r-b-build.jGQjWCYd/b2/mdanalysis_2.4.2+dfsg1-1_amd64.changes
├── Files
│ @@ -1,4 +1,4 @@
│
│ - 0795980a0426b4717f836075da9fd1ac 2372308 doc optional python-mdanalysis-doc_2.4.2+dfsg1-1_all.deb
│ + 409fafb764e994f6830905122ebd31fb 2372328 doc optional python-mdanalysis-doc_2.4.2+dfsg1-1_all.deb
│ e34f8194f73f1e4fed537e614a7deac1 4324564 debug optional python3-mdanalysis-dbgsym_2.4.2+dfsg1-1_amd64.deb
│ 61d354769a6778711ed7064d2a70c207 1627676 python optional python3-mdanalysis_2.4.2+dfsg1-1_amd64.deb
├── python-mdanalysis-doc_2.4.2+dfsg1-1_all.deb
│ ├── file list
│ │ @@ -1,3 +1,3 @@
│ │ -rw-r--r-- 0 0 0 4 2023-01-09 16:54:02.000000 debian-binary
│ │ -rw-r--r-- 0 0 0 13256 2023-01-09 16:54:02.000000 control.tar.xz
│ │ --rw-r--r-- 0 0 0 2358860 2023-01-09 16:54:02.000000 data.tar.xz
│ │ +-rw-r--r-- 0 0 0 2358880 2023-01-09 16:54:02.000000 data.tar.xz
│ ├── control.tar.xz
│ │ ├── control.tar
│ │ │ ├── ./md5sums
│ │ │ │ ├── ./md5sums
│ │ │ │ │┄ Files differ
│ ├── data.tar.xz
│ │ ├── data.tar
│ │ │ ├── ./usr/share/doc/python-mdanalysis-doc/html/documentation_pages/analysis/wbridge_analysis.html
│ │ │ │ @@ -1005,23 +1005,23 @@
│ │ │ │ Deprecated since version 2.0.0: Will be removed in MDAnalysis 3.0.0. Please use
│ │ │ │ results.timeseries instead.
│ │ │ │
│ │ │ │
│ │ │ │
│ │ │ │
│ │ │ │ -
│ │ │ │ -DEFAULT_ACCEPTORS = {'CHARMM27': ('OD1', 'SD', 'O', 'SG', 'ND1', 'OG1', 'OD2', 'OC1', 'NE2', 'OH', 'OH2', 'OE2', 'OC2', 'OE1', 'OG', 'OW'), 'GLYCAM06': ('OH', 'O', 'OY', 'SM', 'NT', 'OS', 'N', 'OW', 'O2'), 'other': ()}
│ │ │ │ +DEFAULT_ACCEPTORS = {'CHARMM27': ('OD2', 'OC2', 'OH2', 'OE2', 'OC1', 'OG1', 'OW', 'OH', 'ND1', 'SD', 'OE1', 'O', 'NE2', 'SG', 'OD1', 'OG'), 'GLYCAM06': ('SM', 'NT', 'O', 'OS', 'N', 'OY', 'OW', 'OH', 'O2'), 'other': ()}
│ │ │ │ default atom names that are treated as hydrogen acceptors
│ │ │ │ (see Default heavy atom names for CHARMM27 force field.);
│ │ │ │ use the keyword acceptors to add a list of additional acceptor names.
│ │ │ │
│ │ │ │
│ │ │ │
│ │ │ │ -
│ │ │ │ -DEFAULT_DONORS = {'CHARMM27': ('ND2', 'NE1', 'NE2', 'OH', 'NH1', 'NZ', 'OH2', 'SG', 'ND1', 'OG', 'N', 'NE', 'OG1', 'NH2', 'OW'), 'GLYCAM06': ('OH', 'N', 'OW', 'NT', 'N3'), 'other': ()}
│ │ │ │ +DEFAULT_DONORS = {'CHARMM27': ('ND1', 'NZ', 'NE', 'NE2', 'N', 'NH2', 'OH2', 'NE1', 'NH1', 'SG', 'OG1', 'OW', 'OH', 'ND2', 'OG'), 'GLYCAM06': ('N', 'OW', 'NT', 'OH', 'N3'), 'other': ()}
│ │ │ │ default heavy atom names whose hydrogens are treated as donors
│ │ │ │ (see Default heavy atom names for CHARMM27 force field.);
│ │ │ │ use the keyword donors to add a list of additional donor names.
│ │ │ │
│ │ │ │
│ │ │ │
│ │ │ │ -
│ │ │ │ ├── html2text {}
│ │ │ │ │ @@ -634,24 +634,24 @@
│ │ │ │ │ List of hydrogen bonds between the selection 1 or selection 2 and
│ │ │ │ │ the bridging waters, for each frame.
│ │ │ │ │ New in version 2.0.0.
│ │ │ │ │ timeseriesï
│ │ │ │ │ Alias to the results.timeseries attribute.
│ │ │ │ │ Deprecated since version 2.0.0: Will be removed in MDAnalysis
│ │ │ │ │ 3.0.0. Please use results.timeseries instead.
│ │ │ │ │ - DEFAULT_ACCEPTORS= {'CHARMM27': ('OD1', 'SD', 'O', 'SG', 'ND1', 'OG1',
│ │ │ │ │ - 'OD2', 'OC1', 'NE2', 'OH', 'OH2', 'OE2', 'OC2', 'OE1', 'OG', 'OW'),
│ │ │ │ │ - 'GLYCAM06': ('OH', 'O', 'OY', 'SM', 'NT', 'OS', 'N', 'OW', 'O2'),
│ │ │ │ │ + DEFAULT_ACCEPTORS= {'CHARMM27': ('OD2', 'OC2', 'OH2', 'OE2', 'OC1',
│ │ │ │ │ + 'OG1', 'OW', 'OH', 'ND1', 'SD', 'OE1', 'O', 'NE2', 'SG', 'OD1', 'OG'),
│ │ │ │ │ + 'GLYCAM06': ('SM', 'NT', 'O', 'OS', 'N', 'OY', 'OW', 'OH', 'O2'),
│ │ │ │ │ 'other': ()}ï
│ │ │ │ │ default atom names that are treated as hydrogen acceptors (see
│ │ │ │ │ Default_heavy_atom_names_for_CHARMM27_force_field.); use the
│ │ │ │ │ keywordacceptorsto add a list of additional acceptor names.
│ │ │ │ │ - DEFAULT_DONORS= {'CHARMM27': ('ND2', 'NE1', 'NE2', 'OH', 'NH1', 'NZ',
│ │ │ │ │ - 'OH2', 'SG', 'ND1', 'OG', 'N', 'NE', 'OG1', 'NH2', 'OW'), 'GLYCAM06':
│ │ │ │ │ - ('OH', 'N', 'OW', 'NT', 'N3'), 'other': ()}ï
│ │ │ │ │ + DEFAULT_DONORS= {'CHARMM27': ('ND1', 'NZ', 'NE', 'NE2', 'N', 'NH2',
│ │ │ │ │ + 'OH2', 'NE1', 'NH1', 'SG', 'OG1', 'OW', 'OH', 'ND2', 'OG'), 'GLYCAM06':
│ │ │ │ │ + ('N', 'OW', 'NT', 'OH', 'N3'), 'other': ()}ï
│ │ │ │ │ default heavy atom names whose hydrogens are treated as donors (see
│ │ │ │ │ Default_heavy_atom_names_for_CHARMM27_force_field.); use the
│ │ │ │ │ keyworddonorsto add a list of additional donor names.
│ │ │ │ │ count_by_time(analysis_func=None, **kwargs)[source]ï
│ │ │ │ │ Counts the number of water bridges per timestep.
│ │ │ │ │ The counting behaviour can be adjusted by supplying analysis_func.
│ │ │ │ │ See Use_count_by_time for details.