Diff of the two buildlogs: -- --- b1/build.log 2024-01-27 14:27:23.322311127 +0000 +++ b2/build.log 2024-01-27 16:27:00.425461021 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Jan 27 01:08:24 -12 2024 -I: pbuilder-time-stamp: 1706360904 +I: Current time: Sat Mar 1 10:50:28 +14 2025 +I: pbuilder-time-stamp: 1740775828 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -39,49 +39,81 @@ dpkg-source: info: applying which.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1619213/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 28 20:50 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='2ad40322d0224048983f5d72311ed90a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1619213' - PS1='# ' - PS2='> ' + INVOCATION_ID=7e57af2c27624bf6a7188a3d5d3ee0cf + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1156224 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.i22RUmE3/pbuilderrc_Cpus --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.i22RUmE3/b1 --logfile b1/build.log python-escript_5.6-4.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.i22RUmE3/pbuilderrc_kSR1 --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.i22RUmE3/b2 --logfile b2/build.log python-escript_5.6-4.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos11-amd64 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.5.0-0.deb12.4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.5.10-1~bpo12+1 (2023-11-23) x86_64 GNU/Linux I: ls -l /bin total 5632 -rwxr-xr-x 1 root root 1265648 Apr 23 2023 bash @@ -139,15 +171,15 @@ -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Jul 28 23:46 run-parts + -rwxr-xr-x 1 root root 27560 Jul 28 2023 run-parts -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash + lrwxrwxrwx 1 root root 9 Feb 28 20:50 sh -> /bin/bash -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty -rwsr-xr-x 1 root root 72000 Mar 23 2023 su -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar - -rwxr-xr-x 1 root root 14520 Jul 28 23:46 tempfile + -rwxr-xr-x 1 root root 14520 Jul 28 2023 tempfile -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch -rwxr-xr-x 1 root root 35664 Sep 20 2022 true -rwxr-xr-x 1 root root 14568 Mar 23 2023 ulockmgr_server @@ -167,7 +199,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/1619213/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -720,7 +752,7 @@ Get: 447 http://deb.debian.org/debian bookworm/main amd64 texlive-pictures all 2022.20230122-3 [15.8 MB] Get: 448 http://deb.debian.org/debian bookworm/main amd64 texlive-latex-extra all 2022.20230122-4 [19.2 MB] Get: 449 http://deb.debian.org/debian bookworm/main amd64 zip amd64 3.0-13 [230 kB] -Fetched 465 MB in 39s (11.8 MB/s) +Fetched 465 MB in 9s (53.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package poppler-data. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18148 files and directories currently installed.) @@ -2146,8 +2178,8 @@ Setting up tzdata (2023c-5+deb12u1) ... Current default time zone: 'Etc/UTC' -Local time is now: Sat Jan 27 13:11:54 UTC 2024. -Universal Time is now: Sat Jan 27 13:11:54 UTC 2024. +Local time is now: Fri Feb 28 20:54:39 UTC 2025. +Universal Time is now: Fri Feb 28 20:54:39 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.0.0-1) ... @@ -2588,7 +2620,11 @@ fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/python-escript-5.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-escript_5.6-4_source.changes +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bookworm +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-escript-5.6/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-escript_5.6-4_source.changes dpkg-buildpackage: info: source package python-escript dpkg-buildpackage: info: source version 5.6-4 dpkg-buildpackage: info: source distribution unstable @@ -2652,12 +2688,12 @@ make[1]: Entering directory '/build/reproducible-path/python-escript-5.6' # Build steps for py3 mkdir -p /build/reproducible-path/python-escript-5.6/debian/stage3 -scons -j15 cc_optim=' -O3 ' build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs +scons -j16 cc_optim=' -O3 ' build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs scons: Reading SConscript files ... 3.11.2 (main, Mar 13 2023, 12:18:29) [GCC 12.2.0] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... yes Checking for C++ function gethostname()... yes Checking for C++ header file byteswap.h... yes @@ -2678,7 +2714,7 @@ Checking for C++ library umfpack... yes Checking for C++ library siloh5... yes Checking for C++ library boost_iostreams... yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-umhblisf because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-4l1i8iaz because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -2717,140 +2753,176 @@ `width' (478.00812pt) is ignored. ) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)entering extended mode +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.styentering extended mode LaTeX2e <2022-11-01> patch level 1 L3 programming layer <2023-01-16> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst all.tex (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/esys -doc.cls) +doc.cls +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty Document Class: book 2022/07/02 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo))) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty) -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty)) -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -) -(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty))) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty) For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty) +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty) +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty))) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de -fs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +fs.tex) (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty **************************************** * Local config file subfigure.cfg used * **************************************** (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) -(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) LaTeX Warning: \include should only be used after \begin{document} on input lin e 183. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t -ex) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +ex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty) Package `listing', V1.2, <1999/05/25> ))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)))) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo -.tex) +.tex +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) Writing index file user.idx (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) No file user.aux. *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] -) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all_defs.tex +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) [1 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)){/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/elis +t.tex}] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig -hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) +hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)))) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid -e.tex [2]) [3] -(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +e.tex [2 (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty] +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))) [3] +(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty +Excluding comment 'comment') (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri +nfo.tex)) LaTeX Warning: Reference `app:py3' on page 4 undefined on input line 74. @@ -2862,20 +2934,18 @@ [4] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current -dev.tex -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) [5]) [6] +dev.tex [5]) [6] +Writing index file install.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) No file user.toc. [7] -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.tex [8]) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +lPDE.tex [8] +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst ep.tex -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) LaTeX Warning: Reference `fig:FirstSteps.1' on page 9 undefined on input line 3 3. @@ -2885,9 +2955,13 @@ . [9 ] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty +res//FirstStepDomain.pdf +No file install.aux. +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii>] +[Loading MPS to PDF converter (version 2006.09.02).] +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty LaTeX Warning: Reference `fig:FirstSteps.1' on page 10 undefined on input line 94. @@ -2918,9 +2992,13 @@ LaTeX Warning: Citation `NumHand' on page 10 undefined on input line 148. -[10]) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)))) +[10 +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)]) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] LaTeX Warning: Reference `chap:finley' on page 11 undefined on input line 194. @@ -2933,298 +3011,12 @@ [11 ] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def - -LaTeX Warning: Reference `eq:FirstSteps.2' on page 12 undefined on input line 2 -05. - - -LaTeX Warning: Reference `eq:FirstSteps.2c' on page 12 undefined on input line -214. - - -LaTeX Warning: Reference `ESCRIPT CHAP' on page 12 undefined on input line 223. - - -[12]) - -LaTeX Warning: Citation `matplotlib' on page 13 undefined on input line 312. - - -LaTeX Warning: Citation `mayavi' on page 13 undefined on input line 317. - - -LaTeX Warning: Citation `VisIt' on page 13 undefined on input line 317. - -[13] -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) [14 ] -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty - -LaTeX Warning: Reference `fig:FirstSteps.3b' on page 15 undefined on input line - 407. - - -LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 408. - - -LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 426. - - -LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 426. - -[15) ] - -LaTeX Warning: Reference `fig:FirstSteps.3' on page 16 undefined on input line -470. - -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi -on.tex -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty - -LaTeX Warning: Reference `DIFFUSION FIG 1' on page 16 undefined on input line 2 -4. - - -LaTeX Warning: Reference `DIFFUSION TEMP SEC' on page 16 undefined on input lin -e 32. - - -LaTeX Warning: Reference `DIFFUSION HELM SEC' on page 16 undefined on input lin -e 35. - - -LaTeX Warning: Reference `DIFFUSION TRANS SEC' on page 16 undefined on input li -ne 36. - - -LaTeX Warning: Reference `FirstSteps' on page 16 undefined on input line 49. - -[16 ] -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li -ne 72. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li -ne 79. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li -ne 92. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 4' on page 17 undefined on input li -ne 98. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li -ne 104. - - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 2222' on page 17 undefined on input - line 121. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 17 undefined on input li -ne 126. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 17 undefined on input li -ne 127. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 17 undefined on input lin -e 136. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on -input line 145. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.3 TUTORIAL' on page 17 undefined on -input line 153. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on -input line 154. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 17 undefined on -input line 154. - - -LaTeX Warning: Reference `FirstSteps' on page 17 undefined on input line 156. - -[17]))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) - -LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 18 undefined on input li -ne 161. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li -ne 161. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li -ne 177. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 18 undefined on -input line 179. - -[18] -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx - -LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274. - - -LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li -ne 306. - -[19))] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/elis -t.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty - -LaTeX Warning: Reference `DIFFUSION TEMP EQ 1b' on page 20 undefined on input l -ine 318. - -[20] -Excluding comment 'comment') -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri -nfo.tex) - -LaTeX Warning: Reference `DIFFUSION FIG 2' on page 21 undefined on input line 4 -03. - -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te -x -Writing index file install.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) - -LaTeX Warning: Reference `WAVE FIG 1.2' on page 21 undefined on input line 61. - -[21 ] -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def - -LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87. - - -LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96. - - -LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97. - - -LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105 -. - -[22) ] - -LaTeX Warning: Reference `WAVE dyn 3aa' on page 23 undefined on input line 121. - - -[23 ] -No file install.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -[Loading MPS to PDF converter (version 2006.09.02).] -) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) - -LaTeX Warning: Reference `LUMPING' on page 24 undefined on input line 214. - -[24] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map}] - -LaTeX Warning: Reference `SEC ESCRIPT DATA' on page 25 undefined on input line -228. - - -LaTeX Warning: Reference `DIFFUSION CHAP' on page 25 undefined on input line 25 -1. - -[25] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/docg -uide.tex) [2 - -LaTeX Warning: Reference `WAVE dyn 66' on page 26 undefined on input line 323. - - -LaTeX Warning: Reference `WAVE FIG 2' on page 26 undefined on input line 335. - - -LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 346. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd]) - -LaTeX Warning: Citation `GNUPLOT' on page 26 undefined on input line 359. - -[26 +uide.tex) [2] No file install.toc. -[3]] +[3] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr o.tex [4] - -LaTeX Warning: Reference `WAVE FIG 1' on page 27 undefined on input line 365. - - -LaTeX Warning: Reference `WAVE FIG 1.2' on page 27 undefined on input line 366. - - - -LaTeX Warning: Reference `EXECUTION' on page 27 undefined on input line 369. - - -LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 396. - - -LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 398. - -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex -Underfull \vbox (badness 1655) has occurred while \output is active [27 ] Chapter 1. LaTeX Warning: Reference `chap:source' on page 5 undefined on input line 30. @@ -3236,139 +3028,49 @@ LaTeX Warning: Reference `app:trilinos' on page 5 undefined on input line 33. -) [5 - -LaTeX Warning: Reference `HEATEDBLOCK general problem' on page 28 undefined on -input line 31. - - -LaTeX Warning: Reference `WAVE general problem' on page 28 undefined on input l -ine 31. - - -LaTeX Warning: Reference `WAVE CHAP' on page 28 undefined on input line 32. - - -LaTeX Warning: Reference `WAVE stress' on page 28 undefined on input line 34. - - -LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i -nput line 35. - - -LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i -nput line 58. - - -LaTeX Warning: Reference `LINEARPDE.SYSTEM.1' on page 28 undefined on input lin -e 67. - - -LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on -input line 77. - - -LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i -nput line 96. - - -LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on -input line 99. - -[28]] +) [5] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat pak.tex [6]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex Chapter 2. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty [29] - -LaTeX Warning: Reference `HEATEDBLOCK FIG 2' on page 30 undefined on input line - 179. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.styThis is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf -low.tex -LaTeX Warning: Reference `GENERAL NAVIER STOKES COM' on page 30 undefined on in -put line 72. +LaTeX Warning: Reference `eq:FirstSteps.2' on page 12 undefined on input line 2 +05. -LaTeX Warning: Reference `MODELS CHAPTER' on page 30 undefined on input line 77 -. +LaTeX Warning: Reference `eq:FirstSteps.2c' on page 12 undefined on input line +214. -[30 ]) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty)This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty +LaTeX Warning: Reference `ESCRIPT CHAP' on page 12 undefined on input line 223. -LaTeX Warning: Citation `LBB' on page 31 undefined on input line 106. -[31)]) [7] +[12) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty)) [7] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond a.tex [8] - -LaTeX Warning: Reference `FLUID OUTPUT' on page 32 undefined on input line 218. - - -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te -x Chapter 3. -) +) [9] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.tex [10] -LaTeX Warning: Reference `fig:slip.1' on page 32 undefined on input line 28. +LaTeX Warning: Citation `matplotlib' on page 13 undefined on input line 312. -[32] [9] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.tex -LaTeX Warning: Reference `ELASTIC CHAP' on page 33 undefined on input line 50. +LaTeX Warning: Citation `mayavi' on page 13 undefined on input line 317. -LaTeX Warning: Reference `Slip stress' on page 33 undefined on input line 63. +LaTeX Warning: Citation `VisIt' on page 13 undefined on input line 317. -[33 ] +[13 Chapter 4. -) [11] +)] [11] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.tex - -LaTeX Warning: Reference `Slip stress split' on page 34 undefined on input line - 85. - - -LaTeX Warning: Reference `Slip general problem' on page 34 undefined on input l -ine 85. - - -LaTeX Warning: Reference `Slip stress split 1' on page 34 undefined on input li -ne 90. - - -LaTeX Warning: Reference `Slip constraint' on page 34 undefined on input line 9 -2. - - -LaTeX Warning: Reference `Slip natural fault' on page 34 undefined on input lin -e 92. - - -LaTeX Warning: Reference `ELASTIC CHAP' on page 34 undefined on input line 94. - - -LaTeX Warning: Reference `Fault System' on page 34 undefined on input line 97. - -[34 ] [12] +ce.tex [12] Chapter 5. LaTeX Warning: Reference `sec:needpar' on page 13 undefined on input line 27. @@ -3378,28 +3080,12 @@ LaTeX Warning: Reference `app:cxxfeatures' on page 13 undefined on input line 4 0. -[13cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex -] [35] - -LaTeX Warning: Reference `fig:slip.2' on page 36 undefined on input line 190. - -)cd /build/reproducible-path/python-escript-5.6/doc && tar -cf /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t -exentering extended mode -LaTeX2e <2022-11-01> patch level 1 -L3 programming layer <2023-01-16>cd /build/reproducible-path/python-escript-5.6/doc && zip /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.zip examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh +[13]cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex +cd /build/reproducible-path/python-escript-5.6/doc && tar -cf /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh +cd /build/reproducible-path/python-escript-5.6/doc && zip /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.zip examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) restricted \write18 enabled. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.texMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen") - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy -sdoc.clsMkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/sphinx_api") -Mkdir("/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int") -Touch("debian/stage3/esys/__init__.py") - LaTeX Warning: Reference `sec:build' on page 14 undefined on input line 79. @@ -3443,18 +3129,11 @@ LaTeX Warning: Reference `sec:cleanup' on page 14 undefined on input line 115. -[14 -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo]) - -LaTeX Warning: Reference `EX:DIRAC1' on page 36 undefined on input line 47. - -[36 adding: examples/usersguide/lid_driven_cavity.py (deflated 55%) +[14]Mkdir("/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen") + [14 adding: examples/usersguide/lid_driven_cavity.py (deflated 55%) adding: examples/usersguide/mount.py (deflated 60%) adding: examples/usersguide/heatedblock.py (deflated 58%) - adding: examples/usersguide/helmholtz.py) (deflated 56%) + adding: examples/usersguide/helmholtz.py (deflated 56%) adding: examples/usersguide/fluid.py (deflated 56%) adding: examples/usersguide/poisson.py (deflated 56%) adding: examples/usersguide/diffusion.py (deflated 56%) @@ -3462,10 +3141,10 @@ adding: examples/usersguide/darcy.py (deflated 57%) adding: examples/usersguide/dirac.py (deflated 57%) adding: examples/usersguide/slip.py (deflated 57%) - adding: examples/usersguide/int_save.py ] (deflated 60%) + adding: examples/inversion/mag_netcdf.py (deflated 59%) adding: examples/inversion/test_commemi1.py (deflated 73%) - adding: examples/inversion/test_commemi4.py (deflated 75%) + adding: examples/inversion/test_commemi4.pyMkdir("/build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int") +Touch("debian/stage3/esys/__init__.py") + (deflated 75%) adding: examples/usersguide/poisson_matplotlib.py (deflated 59%) adding: examples/cookbook/example01c.py (deflated 58%) adding: examples/cookbook/example02.py (deflated 58%) adding: examples/cookbook/example03a.py (deflated 58%) adding: examples/cookbook/example07a.py (deflated 60%) - adding: examples/cookbook/example07b.py -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty (deflated 60%) + adding: examples/cookbook/example07b.py (deflated 60%) adding: examples/cookbook/example08a.py (deflated 60%) adding: examples/cookbook/example08b.py (deflated 62%) adding: examples/cookbook/example10a.py (deflated 58%) adding: examples/cookbook/example10b.py (deflated 58%) - adding: examples/cookbook/example11a.py) (deflated 58%) + adding: examples/cookbook/example11a.py (deflated 58%) adding: examples/cookbook/example11b.py (deflated 59%) adding: examples/inversion/plot_ermapper.py (deflated 60%) adding: examples/inversion/plot_netcdf.py (deflated 56%) @@ -3502,61 +3182,156 @@ adding: examples/inversion/content.txt (deflated 77%) adding: examples/inversion/data/GravitySmall (deflated 3%) adding: examples/inversion/data/MagneticSmall (deflated 1%) - adding: examples/inversion/data/QLDWestGravity/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc - (deflated 11%) - adding: examples/inversion/data/QLDWestMagnetic -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty (deflated 7%) + adding: examples/inversion/data/QLDWestGravity (deflated 11%) + adding: examples/inversion/data/QLDWestMagnetic (deflated 7%) adding: examples/inversion/data/GravitySmall.ers (deflated 49%) adding: examples/inversion/data/MagneticSmall.ers (deflated 49%) adding: examples/inversion/data/QLDWestGravity.ers (deflated 50%) adding: examples/inversion/data/QLDWestMagnetic.ers (deflated 50%) adding: examples/inversion/data/GravitySmall.nc (deflated 46%) adding: examples/inversion/data/MagneticSmall.nc (deflated 43%) -)) adding: examples/inversion/data/QLDWestGravity.nc + adding: examples/inversion/data/QLDWestGravity.nc/usr/bin/python3 scripts/py_comp.py downunder/py_src/__init__.py debian/tmp3/posix/downunder/__init__.pyc + (deflated 12%) + adding: examples/inversion/data/QLDWestMagnetic.nc/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc + (deflated 9%) + adding: examples/inversion/data/HalfSphere_v1.4.msh/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc +/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc +/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. -) (deflated 12%) - adding: examples/inversion/data/QLDWestMagnetic.nc (deflated 9%) - adding: examples/inversion/data/HalfSphere_v1.4.msh (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/MTModels.py debian/tmp3/posix/downunder/apps/MTModels.pyc +LaTeX Warning: Reference `fig:FirstSteps.3b' on page 15 undefined on input line + 407. -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/__init__.py debian/tmp3/posix/downunder/apps/__init__.pyc -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/dcModels.py debian/tmp3/posix/downunder/apps/dcModels.pyc +LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 408. -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) + +LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 426. + + +LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 426. + +[15 ]entering extended mode +LaTeX2e <2022-11-01> patch level 1 +L3 programming layer <2023-01-16>/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo +kbook.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esy +sdoc.cls + +LaTeX Warning: Reference `fig:FirstSteps.3' on page 16 undefined on input line +470. + +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi +on.tex Underfull \hbox (badness 10000) in paragraph at lines 159--160 Underfull \hbox (badness 10000) in paragraph at lines 207--208 -[15/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/gravityModels.py debian/tmp3/posix/downunder/apps/gravityModels.pyc +[15] +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2022/07/02 v1.4n Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clogzip -n -9 /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar +)(cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - +/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc +)/usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc +/usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.stygzip -n -9 /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty(cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - +LaTeX Warning: Reference `DIFFUSION FIG 1' on page 16 undefined on input line 2 +4. -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/magneticModels.py debian/tmp3/posix/downunder/apps/magneticModels.pyc + +LaTeX Warning: Reference `DIFFUSION TEMP SEC' on page 16 undefined on input lin +e 32. + + +LaTeX Warning: Reference `DIFFUSION HELM SEC' on page 16 undefined on input lin +e 35. + + +LaTeX Warning: Reference `DIFFUSION TRANS SEC' on page 16 undefined on input li +ne 36. + + +LaTeX Warning: Reference `FirstSteps' on page 16 undefined on input line 49. + +[16 +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty ]) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.styInstall file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc )) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/apps/seismicModels.py debian/tmp3/posix/downunder/apps/seismicModels.pyc -) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/coordinates.py debian/tmp3/posix/downunder/coordinates.pyc - (deflated 65%) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li +ne 72. + + +LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li +ne 79. + + +LaTeX Warning: Reference `DIFFUSION TEMP EQ 1' on page 17 undefined on input li +ne 92. + + +LaTeX Warning: Reference `DIFFUSION TEMP EQ 4' on page 17 undefined on input li +ne 98. + + +LaTeX Warning: Reference `DIFFUSION TEMP EQ 2' on page 17 undefined on input li +ne 104. + + +LaTeX Warning: Reference `DIFFUSION TEMP EQ 2222' on page 17 undefined on input + line 121. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 17 undefined on input li +ne 126. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 17 undefined on input li +ne 127. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 17 undefined on input lin +e 136. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on +input line 145. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.3 TUTORIAL' on page 17 undefined on +input line 153. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.1 TUTORIAL' on page 17 undefined on +input line 154. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 17 undefined on +input line 154. + + +LaTeX Warning: Reference `FirstSteps' on page 17 undefined on input line 156. + +[17]Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/dcresistivityforwardmodeling.py debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc + + +Package geometry Warning: Over-specification in `h'-direction. + `width' (478.00812pt) is ignored. + +) LaTeX Warning: Reference `sec:cleanup' on page 16 undefined on input line 240. @@ -3566,44 +3341,17 @@ Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[16]Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" -) -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.styInstall file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc" -entering extended mode -LaTeX2e <2022-11-01> patch level 1 -L3 programming layer <2023-01-16> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.cls -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls/usr/bin/python3 scripts/py_comp.py downunder/py_src/costfunctions.py debian/tmp3/posix/downunder/costfunctions.pyc -)) -Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo -(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty))) -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty - -LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 319. - -Excluding 'comment' comment.) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/datasources.py debian/tmp3/posix/downunder/datasources.pyc - [17 -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.stysh: 1: ]svnversion: not found +[16] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/domainbuilder.py debian/tmp3/posix/downunder/domainbuilder.pyc -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.stywarning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.styInstall file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/__init__.py debian/tmp3/posix/downunder/forwardmodels/__init__.pyc +sh: line 1: svnversion: command not found +warning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -)warning: Tag 'LATEX_SOURCE_CODE' at line 1716 of file '-' has become obsolete. +warning: Tag 'LATEX_SOURCE_CODE' at line 1716 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 1878 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" @@ -3613,91 +3361,98 @@ To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 2079 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" -)warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value +warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! -) +Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfgInstall file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc +))Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" -) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.styInstall file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" -)/usr/bin/python3 scripts/py_comp.py downunder/py_src/dcresistivityforwardmodeling.py debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc - (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfgInstall file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/domainbuilder.py debian/tmp3/posix/downunder/domainbuilder.pyc -))) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.styInstall file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.styInstall file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" -Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" -) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty [18Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" +LaTeX Warning: Reference `sec:cleanup' on page 17 undefined on input line 319. -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)] -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/__init__.py debian/tmp3/posix/downunder/forwardmodels/__init__.pyc +Excluding 'comment' comment.Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/dcresistivity.py debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc +)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/gravity.py debian/tmp3/posix/downunder/forwardmodels/gravity.pyc + +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.styentering extended mode +LaTeX2e <2022-11-01> patch level 1 +L3 programming layer <2023-01-16>) +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty [17] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.tex)Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es +ysdoc.cls + +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 18 undefined on input li +ne 161. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li +ne 161. + + +LaTeX Warning: Reference `DIFFUSION HELM EQ 2' on page 18 undefined on input li +ne 177. + + +LaTeX Warning: Reference `LINEARPDE.SINGLE.2 TUTORIAL' on page 18 undefined on +input line 179. + +[18/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetic.py debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc + +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2022/07/02 v1.4n Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)] +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty) (deflated 65%) +/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetotelluric2d.py debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc + +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" + +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" + +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/pressure.py debian/tmp3/posix/downunder/forwardmodels/pressure.pyc ) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/subsidence.py debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc + (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.styInstall file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/acoustic.py debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/base.py debian/tmp3/posix/downunder/forwardmodels/base.pyc -)) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty [19]) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/dcresistivity.py debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc +Package geometry Warning: Over-specification in `h'-direction. + `width' (478.00812pt) is ignored. -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty))/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/gravity.py debian/tmp3/posix/downunder/forwardmodels/gravity.pyc +)))Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversioncostfunctions.py debian/tmp3/posix/downunder/inversioncostfunctions.pyc + (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/inversions.py debian/tmp3/posix/downunder/inversions.pyc + [18] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel1d.py debian/tmp3/posix/downunder/magtel1d.pyc -LaTeX Warning: Reference `app:trilinos' on page 20 undefined on input line 618. +LaTeX Warning: Reference `FirstSteps' on page 19 undefined on input line 274. -[20 -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)]))Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" -/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetic.py debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc -) -(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def)) -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty [21 -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty))Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" -] -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.texInstall file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" -) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty [22] -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -Appendix A. -) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty [23) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty]Doxygen version used: 1.9.4 +LaTeX Warning: Reference `DIFFUSION HELM EQ 1' on page 19 undefined on input li +ne 306. + +[19 +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" +/usr/bin/python3 scripts/py_comp.py downunder/py_src/magtel2d.py debian/tmp3/posix/downunder/magtel2d.pyc +Doxygen version used: 1.9.4 Searching for include files... Searching for example files... Searching for images... @@ -3747,106 +3502,109 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.tex)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/magnetotelluric2d.py debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc -) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty [24>])] -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/pressure.py debian/tmp3/posix/downunder/forwardmodels/pressure.pyc +Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.styInstall file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty))) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)/usr/bin/python3 scripts/py_comp.py downunder/py_src/forwardmodels/subsidence.py debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc -) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -Appendix B. -(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook_defs.tex +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd)))Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" + [19/usr/bin/python3 scripts/py_comp.py downunder/py_src/mappings.py debian/tmp3/posix/downunder/mappings.pyc +] +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))/usr/bin/python3 scripts/py_comp.py downunder/py_src/minimizers.py debian/tmp3/posix/downunder/minimizers.pyc -LaTeX Warning: Reference `FIG:EX:DIRAC' on page 37 undefined on input line 75. +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty))Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" -))) [37 [25 -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty]) ] -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty -\gdef\@extra@binfo{@-1}\@writefile{toc}{\gdef \the@ipfilectr{@-1}}\@writefile{l -of}{\gdef \the@ipfilectr{@-1}}\@writefile{lot}{\gdef \the@ipfilectr{@-1}} +LaTeX Warning: Reference `WAVE natural' on page 22 undefined on input line 87. -LaTeX Warning: \include should only be used after \begin{document} on input lin -e 47. + +LaTeX Warning: Reference `WAVE source' on page 22 undefined on input line 96. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli -st.tex) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitinversioncostfunctions.py debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc -/Data.cpp... +LaTeX Warning: Reference `WAVE FIG 1.1' on page 22 undefined on input line 97. + + +LaTeX Warning: Reference `SEC LinearPDE' on page 22 undefined on input line 105 +. + +[22 [26] +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) ] +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty +Underfull \vbox (badness 10000) has occurred while \output is active [27]) +[28] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.aux) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty/Data.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataAbstract.cpp... @@ -3892,58 +3650,32 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... -Parsing ) -Package `listing', V1.2, <1999/05/25> -)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g -def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} -) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver -info.tex))) - -LaTeX Warning: \include should only be used after \begin{document} on input lin -e 18. - +Parsing +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.aux)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.aux)) +kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt1000 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el -ist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd -Writing index file cookbook.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitminimizers.py debian/tmp3/posix/downunder/splitminimizers.pyc -)) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def)) -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty -**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de -fs.tex) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve -rinfo.tex)/usr/bin/python3 scripts/py_comp.py downunder/py_src/splitregularizations.py debian/tmp3/posix/downunder/splitregularizations.pyc -Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" -Install file: "debian/tmp3/posix/downunder/magtel2d.pyc" as "debian/stage3/esys/downunder/magtel2d.pyc" -Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -Writing index file inversion.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -No file cookbook.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.defInstall file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" +LaTeX Warning: Reference `WAVE dyn 3aa' on page 23 undefined on input line 121. -[Loading MPS to PDF converter (version 2006.09.02).] -)) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty/usr/bin/python3 scripts/py_comp.py dudley/py_src/__init__.py debian/tmp3/posix/dudley/py/__init__.pyc -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... +[23 +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty))file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorAlt.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.cpp... @@ -3987,35 +3719,12 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpace.h... -Parsing file /build/reproducible-path/>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex [38 -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd -No file inversion.aux. -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd -[Loading MPS to PDF converter (version 2006.09.02).] -)) [1/build/reproducible-path/python-escript-5.6/escriptcore/src/NCHelper.h:26: warning: include file string not found, perhaps you forgot to add its directory to INCLUDE_PATH? -{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map} (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty] -Chapter 2. - -LaTeX Warning: Reference `FirstSteps' on page 39 undefined on input line 31. - - -LaTeX Warning: Citation `OPENMP' on page 39 undefined on input line 46. - - -LaTeX Warning: Citation `MPI' on page 39 undefined on input line 47. +Parsing file /build/reproducible-path/ +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty ] +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty)/build/reproducible-path/python-escript-5.6/escriptcore/src/NCHelper.h:26: warning: include file string not found, perhaps you forgot to add its directory to INCLUDE_PATH? -[39 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc -guide.tex -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))] [2])python-escript-5.6/escriptcore/src/FunctionSpace.h... +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.stypython-escript-5.6/escriptcore/src/FunctionSpace.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceException.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceException.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/FunctionSpaceFactory.cpp... @@ -4059,206 +3768,12 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.cpp... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Random.h... -Parsing file /build/reproducible-path/pyt [3] [4] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur -rentdev.tex -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [40] [5]) [6] -No file cookbook.toc. -[7 [1] [8{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map]}] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do -cguide.tex [2] -Chapter 1. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int -ro.tex)) [3 [41]] [4] [42] - -LaTeX Warning: Reference `CHAP HEAT DIFF' on page 9 undefined on input line 77. - - - -LaTeX Warning: Reference `CHAP HEAT 2a' on page 9 undefined on input line 78. - - -LaTeX Warning: Reference `CHAP HEAT 2' on page 9 undefined on input line 78. - -[9 -No file inversion.toc. -[5] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.tex [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.tex] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui -ckstart.tex - -LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26. - - -LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27. - - - -LaTeX Warning: Reference `part1' on page 7 undefined on input line 30. - - -LaTeX Warning: Reference `part2' on page 7 undefined on input line 38. - -)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc -pybas.tex [7] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd [8]) [9] [10])) [10 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.tex] -Chapter 3. -[43] -Chapter 2. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple01.tex - -LaTeX Warning: Reference `fig:onedgbmodel' on page 11 undefined on input line 2 -0. - - -Underfull \vbox (badness 2698) has occurred while \output is active [11 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.47 \end{equation} - ] - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 55. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 59. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 66. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 70. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 76. - - -LaTeX Warning: Reference `eqn:Tbeuler' on page 12 undefined on input line 102. - - -LaTeX Warning: Reference `eqn:hd' on page 12 undefined on input line 102. - - -LaTeX Warning: Reference `eqn:beuler' on page 12 undefined on input line 125. - - -LaTeX Warning: Reference `eqn:hddisc' on page 12 undefined on input line 132. - -[12] - -LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 -. - - -LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 -. - - -Underfull \hbox (badness 1648) in paragraph at lines 79--79 -[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac -es in []. An ar-row in-di-cates that a func-tion in the - -LaTeX Warning: Citation `LBB' on page 44 undefined on input line 83. - - -LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 88. - - -LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 107. - - -LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 119. - - -LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 12 -1. - -[44 ] - -LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l -ine 153. - - -LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 158. - - -LaTeX Warning: Reference `eqn:hddisc' on page 13 undefined on input line 159. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 13 undefined on input l -ine 165. - - -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 171. - - -LaTeX Warning: Reference `eqn:commonform' on page 13 undefined on input line 17 -1. - - -Underfull \hbox (badness 4353) in paragraph at lines 185--185 -[][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able -at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound -ary _ - -LaTeX Warning: Reference `Sec:1DHDv0' on page 13 undefined on input line 191. - - -LaTeX Warning: Reference `NEUMAN 1' on page 13 undefined on input line 217. - - -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 220. - - -LaTeX Warning: Reference `eqn:hdgenf' on page 13 undefined on input line 221. - -[13] - -LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l -ine 235. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 14 undefined on input l -ine 245. - - -LaTeX Warning: Reference `ESCRIPT SET' on page 14 undefined on input line 247. - - -LaTeX Warning: Reference `eqn:hd' on page 14 undefined on input line 258. - - -LaTeX Warning: Reference `sec:escpybas' on page 14 undefined on input line 261. - - - -LaTeX Warning: Reference `sec:key' on page 14 undefined on input line 261. - - -LaTeX Warning: Reference `fig:wf' on page 14 undefined on input line 268. - -[14 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] [15 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.3}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] - -LaTeX Warning: Citation `NUMPY' on page 45 undefined on input line 150. - -[45] - -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 317. - - -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 333. - - -LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 354. - - -LaTeX Warning: Reference `STEADY-STATE HEAT REFRACTION' on page 16 undefined on - input line 383. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 389. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 391. - - -LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l -ine 394. - - -LaTeX Warning: Reference `eqn:commonform2D' on page 16 undefined on input line -406. - - -LaTeX Warning: Reference `eqn:commonform' on page 16 undefined on input line 40 -7. - -[16] - -LaTeX Warning: Reference `eqn:hdgenf' on page 17 undefined on input line 420. - -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)) -Underfull \hbox (badness 10000) in paragraph at lines 415--425 - -[17] [12 ] -Underfull \hbox (badness 10000) in paragraph at lines 604--605 - - -Underfull \hbox (badness 10000) in paragraph at lines 604--605 - +Parsing file /build/reproducib)) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -LaTeX Warning: Reference `Sec:2DHD' on page 19 undefined on input line 617. +LaTeX Warning: Reference `LUMPING' on page 24 undefined on input line 214. -[19]le-path/python-escript-5.6/dudley/src/DudleyDomain.h... +[24 +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.style-path/python-escript-5.6/dudley/src/DudleyDomain.h... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyException.h... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyException.h... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/DudleyVersion.h... @@ -4506,27 +3925,10 @@ Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.h... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.h... -Preprocessing /build/rep - -LaTeX Warning: Reference `sec:datamanager' on page 48 undefined on input line 3 -68. - -[48] - -LaTeX Warning: Reference `fig:onedheatout1' on page 20 undefined on input line -671. - -[20 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.4}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.680 \clearpage - ]Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" - [50]roducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp... +Preprocessing /build/rep))) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)roducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createMappings.cpp... Parsing file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createMappings.cpp... @@ -4569,34 +3971,48 @@ Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Assemble_interpolate.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Assemble_interpolate.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Assemble_jacobians.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Assemble_jacobians.cpp..Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" +Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Assemble_jacobians.cpp.. +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)Install file: "dudley/src/DomainFactory.h" as "debian/stage3/include/dudley/DomainFactory.h" +) + +LaTeX Warning: Reference `SEC ESCRIPT DATA' on page 25 undefined on input line +228. + + +LaTeX Warning: Reference `DIFFUSION CHAP' on page 25 undefined on input line 25 +1. + +[25] +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.styInstall file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" +Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" Install file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc" -Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" -Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc" +Install file: "dudley/src/Dudley.h" as "debian/stage3/include/dudley/Dudley.h" +Install file: "debian/tmp3/posix/downunder/mappings.pyc" as "debian/stage3/esys/downunder/mappings.pyc" Install file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" Install file: "dudley/src/DudleyDomain.h" as "debian/stage3/include/dudley/DudleyDomain.h" Install file: "escriptcore/src/ExceptionTranslators.h" as "debian/stage3/include/escript/ExceptionTranslators.h" -Underfull \hbox (badness 10000) in paragraph at lines 684--692 +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty)) +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) +LaTeX Warning: Reference `WAVE dyn 66' on page 26 undefined on input line 323. -LaTeX Warning: Float too large for page by 10.55325pt on input line 775. -[21 [51] [22 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.5}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.776 \clearpage - ] [13 ] -Underfull \vbox (badness 1348) has occurred while \output is active [53]> ) ]) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.styInstall file: "dudley/src/DudleyException.h" as "debian/stage3/include/dudley/DudleyException.h" Install file: "escriptcore/src/Data.h" as "debian/stage3/include/escript/Data.h" -Install file: "escriptcore/src/DataTypes.h" as "debian/stage3/include/escript/DataTypes.h" Install file: "escriptcore/src/EsysMPI.h" as "debian/stage3/include/escript/EsysMPI.h" -Install file: "dudley/src/system_dep.h" as "debian/stage3/include/dudley/system_dep.h" -Install file: "dudley/src/ElementFile.h" as "debian/stage3/include/dudley/ElementFile.h" -Install file: "dudley/src/NodeFile.h" as "debian/stage3/include/dudley/NodeFile.h" -Install file: "dudley/src/Util.h" as "debian/stage3/include/dudley/Util.h" -Install file: "escriptcore/src/AbstractContinuousDomain.h" as "debian/stage3/include/escript/AbstractContinuousDomain.h" -Install file: "escriptcore/src/FunctionSpace.h" as "debian/stage3/include/escript/FunctionSpace.h" - - -LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138. - - -LaTeX Warning: Reference `FIG:P1:GRAV:1' on page 14 undefined on input line 152 -. - - -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 14 undefined on input line 154 -. - - -LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 14 undefined on input line -155. - - -LaTeX Warning: Reference `code: gravity1' on page 14 undefined on input line 18 -5. - - -LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 14 undefined on input line 188 -. - - -LaTeX Warning: Reference `fig:domainBuilder' on page 14 undefined on input line - 189. - - -LaTeX Warning: Reference `FIG:P1:GRAV:3' on page 14 undefined on input line 217 -. +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.styInstall file: "dudley/src/system_dep.h" as "debian/stage3/include/dudley/system_dep.h" -LaTeX Warning: Reference `sec:forward gravity' on page 14 undefined on input li -ne 226. - -[14] [15 ] +LaTeX Warning: Reference `WAVE FIG 1' on page 27 undefined on input line 365. -LaTeX Warning: Reference `chap:ripley' on page 54 undefined on input line 880. +LaTeX Warning: Reference `WAVE FIG 1.2' on page 27 undefined on input line 366. -LaTeX Warning: Citation `gaussfilter' on page 54 undefined on input line 909. -[54] -LaTeX Warning: Reference `code: gravity1' on page 16 undefined on input line 23 -5. +LaTeX Warning: Reference `EXECUTION' on page 27 undefined on input line 369. -LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278. +LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 396. -LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278. +LaTeX Warning: Citation `SCIPY' on page 27 undefined on input line 398. +)Install file: "dudley/src/NodeFile.h" as "debian/stage3/include/dudley/NodeFile.h" +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.styInstall file: "dudley/src/ElementFile.h" as "debian/stage3/include/dudley/ElementFile.h" +Install file: "dudley/src/Util.h" as "debian/stage3/include/dudley/Util.h" -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex)))Install file: "escriptcore/src/AbstractContinuousDomain.h" as "debian/stage3/include/escript/AbstractContinuousDomain.h" +Install file: "escriptcore/src/DataTypes.h" as "debian/stage3/include/escript/DataTypes.h" -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)Install file: "escriptcore/src/FunctionSpaceFactory.h" as "debian/stage3/include/escript/FunctionSpaceFactory.h" +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) +Underfull \vbox (badness 1655) has occurred while \output is active [27 ] +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))Install file: "escriptcore/src/FunctionSpace.h" as "debian/stage3/include/escript/FunctionSpace.h" Install file: "paso/src/SystemMatrixPattern.h" as "debian/stage3/include/paso/SystemMatrixPattern.h" -Install file: "escriptcore/src/EsysException.h" as "debian/stage3/include/escript/EsysException.h" Install file: "escriptcore/src/system_dep.h" as "debian/stage3/include/escript/system_dep.h" +)) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) - -LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. - - -LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 16 undefined on input line 294 -. - - -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 16 undefined on input line 299 -. - -[16 [55]]Install file: "escriptcore/src/AbstractSystemMatrix.h" as "debian/stage3/include/escript/AbstractSystemMatrix.h" -Install file: "escriptcore/src/Distribution.h" as "debian/stage3/include/escript/Distribution.h" -Install file: "paso/src/Coupler.h" as "debian/stage3/include/paso/Coupler.h" ->mkdir: cannot create directory '././nonexistent': Permission denied -] - -LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 17 undefined on - input line 324. - - -LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327. - - -LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327. - - -LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:ERMAPPER' on page 17 undefined on -input line 329. +LaTeX Warning: Reference `HEATEDBLOCK general problem' on page 28 undefined on +input line 31. -LaTeX Warning: Reference `sec:ref:DataSource:ERM' on page 17 undefined on input - line 330. +LaTeX Warning: Reference `WAVE general problem' on page 28 undefined on input l +ine 31. -LaTeX Warning: Reference `Chp:ref:data sources' on page 17 undefined on input l -ine 333. +LaTeX Warning: Reference `WAVE CHAP' on page 28 undefined on input line 32. -LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 336. +LaTeX Warning: Reference `WAVE stress' on page 28 undefined on input line 34. -LaTeX Warning: Reference `code: gravity1' on page 17 undefined on input line 33 -9. +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 35. -LaTeX Warning: Reference `sec:ref:DataSource' on page 17 undefined on input lin -e 359. +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 58. -LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:MULTIDATA' on page 17 undefined on - input line 416. +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1' on page 28 undefined on input lin +e 67. -[17 [56]] -LaTeX Warning: Reference `code: gravity1' on page 18 undefined on input line 42 -3. +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on +input line 77. -LaTeX Warning: Reference `part2' on page 18 undefined on input line 433. +LaTeX Warning: Reference `HEATEDBLOCK linear elastic' on page 28 undefined on i +nput line 96. -LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:REG' on page 18 undefined on input - line 470. +LaTeX Warning: Reference `LINEARPDE.SYSTEM.1 TUTORIAL' on page 28 undefined on +input line 99. -[18]eprocessing /build/reproducible-path/python-escript-5.6/finley/src/FinleyVersion.h... +[28eprocessing /build/reproducible-path/python-escript-5.6/finley/src/FinleyVersion.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/FinleyVersion.h... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/IndexList.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/IndexList.cpp... @@ -4832,149 +4192,67 @@ Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/Quadrature.h... -Preprocessing /build/ [57] [58] -Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[][][][][][][][][][][][][][][][][][][][][][][][][] - -LaTeX Warning: Reference `fig:onedheatout' on page 23 undefined on input line 8 -12. - +Preprocessing /build/)] +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.styInstall file: "escriptcore/src/EsysException.h" as "debian/stage3/include/escript/EsysException.h" ) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple02.tex -Underfull \hbox (badness 10000) in paragraph at lines 17--19 - - -LaTeX Warning: Reference `fig:onedhdmodel' on page 23 undefined on input line 2 -1. - - -LaTeX Warning: Reference `Sec:1DHDv00' on page 23 undefined on input line 34. - -[23 [59]] [60] - -LaTeX Warning: Reference `code: gravity1' on page 19 undefined on input line 50 -1. - - -LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 504. - - -LaTeX Warning: Citation `mayavi' on page 19 undefined on input line 504. - - -LaTeX Warning: Citation `SILO' on page 19 undefined on input line 516. - - -LaTeX Warning: Citation `VISIT' on page 19 undefined on input line 517. - - -LaTeX Warning: Citation `GOCAD' on page 19 undefined on input line 529. - - -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 564 -. - - -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 564 -. - +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.styInstall file: "escriptcore/src/FunctionSpaceFactory.h" as "debian/stage3/include/escript/FunctionSpaceFactory.h" +)) -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 594 -. +LaTeX Warning: \include should only be used after \begin{document} on input lin +e 18. -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 594 -. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el +ist.tex) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd))) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo +kbook_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de +fs.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve +rinfo.tex))) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty) +Writing index file inversion.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def [29] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -LaTeX Warning: Reference `FIG:P1:GRAV:10' on page 19 undefined on input line 59 -9. +LaTeX Warning: Reference `HEATEDBLOCK FIG 2' on page 30 undefined on input line + 179. +) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf +low.tex) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) -LaTeX Warning: Reference `FIG:P1:GRAV:11' on page 19 undefined on input line 59 -9. +LaTeX Warning: Reference `GENERAL NAVIER STOKES COM' on page 30 undefined on in +put line 72. -LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 19 undefined on input line 601 +LaTeX Warning: Reference `MODELS CHAPTER' on page 30 undefined on input line 77 . - -LaTeX Warning: Citation `ESCRIPT' on page 19 undefined on input line 631. - -[19] - -LaTeX Warning: Reference `eqn:hddisc' on page 24 undefined on input line 71. - - -LaTeX Warning: Reference `SEC BOUNDARY COND' on page 24 undefined on input line - 73. - -[24 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.6}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.110 I - t is important to remark here that if a Dirichlet boundary condition is -] [20 ] [21 ] - -LaTeX Warning: Reference `fig:onedheatout1 002' on page 25 undefined on input l -ine 116. - - -LaTeX Warning: Reference `fig:onedheatout 002' on page 25 undefined on input li -ne 119. - - -LaTeX Warning: Float too large for page by 10.55325pt on input line 146. - -) [25 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.7}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.108 \chapter - {Heat Diffusion in Two Dimensions} ] +(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.styreproducible-path/python-escript-5.6/finley/src/ReferenceElements.cpp... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.h... Parsing file /build/reproducible-path/python-escript-5.6/finley/src/ReferenceElements.h... @@ -5023,18 +4301,25 @@ Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/MKL.h... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/MKL.h... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/mmio.cpp... -Parsing file /build/reproducible-path/pyth>] -[26 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.108 \chapter - {Heat Diffusion in Two Dimensions} ] -Chapter 3. +LaTeX Warning: \include should only be used after \begin{document} on input lin +e 47. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple03.texThis is METAFONT, Version 2.71828182 (TeX Live 2022/Debian) (preloaded base=mf) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt1000.mf -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf>] -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf - Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf - Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf - Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf - Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/eli +st.tex [2 (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +))] +\gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g +def \the@ipfilectr{}}\@writefile{lot}{\gdef \the@ipfilectr{}} +)) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver +info.tex) [3] [4] +Writing index file cookbook.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def +No file inversion.toc. +[5)] [6] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.tex -LaTeX Warning: Reference `part2' on page 23 undefined on input line 751. +LaTeX Warning: Citation `ESCRIPT' on page 7 undefined on input line 26. -) [29]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf - Ok [100] [109] [98] [99] [108]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf - Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [23]6/paso/src/Smoother.cpp... + +LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 7 undefined on input line 27. + + + +LaTeX Warning: Reference `part1' on page 7 undefined on input line 30. + + +LaTeX Warning: Reference `part2' on page 7 undefined on input line 38. + +) [7 +No file cookbook.aux. +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii] +[Loading MPS to PDF converter (version 2006.09.02).] +) [8 + +LaTeX Warning: Citation `LBB' on page 31 undefined on input line 106. + +[31] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty] +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) [9] [10 +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.tex +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc +guide.tex [26/paso/src/Smoother.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/Smoother.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/solve.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/solve.cpp... @@ -5154,171 +4472,253 @@ Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrix_MatrixVector.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrix_mergeMainAndCouple.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrix_mergeMainAndCouple.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/Syste -Underfull \hbox (badness 10000) in paragraph at lines 22--23 +Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/Syste]) [3] [4] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur +rentdev.tex [5]) [6] +No file cookbook.toc. +[7] [8] +Chapter 1. +LaTeX Warning: Reference `part2' on page 11 undefined on input line 12. -Underfull \hbox (badness 10000) in paragraph at lines 22--23 +LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 11 undefined on +input line 32. -LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 3 -0. +LaTeX Warning: Reference `Chp:cook:joint inversion' on page 11 undefined on inp +ut line 32. -LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 32. +Underfull \hbox (badness 10000) in paragraph at lines 54--54 +[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ +\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file -LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 4 -6. +Underfull \hbox (badness 10000) in paragraph at lines 65--65 +[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion + ob-tained by in-ver-sion of file +LaTeX Warning: Citation `ESCRIPTCOOKBOOK' on page 11 undefined on input line 76 +. -LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 66. +LaTeX Warning: Citation `ESCRIPT' on page 11 undefined on input line 77. -LaTeX Warning: Reference `eqn:hd' on page 27 undefined on input line 72. +LaTeX Warning: Reference `code: gravity1' on page 11 undefined on input line 82 +. -LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 73. +[11 +Chapter 1. -[27 [32] [36] [39] [44] -[45] [46] [42] [47] [60] [61] [62]] [77] [79] [87] [110] [91] [93] [94] [95] -[96] [126] [127] [128] [129] [130] [131] [132] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.tex [133] [134] -Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 -\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st -ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 -and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . -[65] [135] [136] [137] -[138] [139] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int +ro.tex] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty -LaTeX Warning: Reference `eqn:commonform nabla' on page 28 undefined on input l -ine 87. +LaTeX Warning: Reference `CHAP HEAT DIFF' on page 9 undefined on input line 77. -LaTeX Warning: Reference `eqn:hdgenf' on page 28 undefined on input line 98. +LaTeX Warning: Reference `CHAP HEAT 2a' on page 9 undefined on input line 78. -LaTeX Warning: Reference `eqn:commonform2D' on page 28 undefined on input line -102. +LaTeX Warning: Reference `CHAP HEAT 2' on page 9 undefined on input line 78. -LaTeX Warning: Reference `ESCRIPT SET' on page 28 undefined on input line 113. +[9] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui +ckstart.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc +pybas.tex) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))) [10] +Chapter 2. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple01.tex -LaTeX Warning: Reference `eqn: kappa general' on page 28 undefined on input lin -e 125. +LaTeX Warning: Reference `fig:onedgbmodel' on page 11 undefined on input line 2 +0. -[28 [24] -pdfTeX warning (ext4): destination with the same identifier (name{figure.3.1}) + +Underfull \vbox (badness 2698) has occurred while \output is active [11 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... -l.141 \begin{python} - ] [141] [142] [143] [144] [145] [146] [147] [148] [149] -[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] -[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174] -[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246]) -(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf - Ok [48] [49] [50] [51] +l.47 \end{equation} + ] [12 ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... -l.112 \chapter - {Complex Geometries} ] +LaTeX Warning: Reference `fig:slip.1' on page 32 undefined on input line 28. -LaTeX Warning: There were undefined references. +[32 [15 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.3}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.313 T + here are various ways to construct domain objects. The simplest form ... + ]] +LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 317. -LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. +LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 333. -Package rerunfilecheck Warning: File `install.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - ) -(see the transcript file for additional information) {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 -r.enc} - [71>]mMatrixPattern.cpp... +LaTeX Warning: Reference `fig:fs' on page 16 undefined on input line 354. + + +LaTeX Warning: Reference `STEADY-STATE HEAT REFRACTION' on page 16 undefined on + input line 383. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l +ine 389. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l +ine 391. + + +LaTeX Warning: Reference `eqn:commonform nabla' on page 16 undefined on input l +ine 394. + + +LaTeX Warning: Reference `eqn:commonform2D' on page 16 undefined on input line +406. + + +LaTeX Warning: Reference `eqn:commonform' on page 16 undefined on input line 40 +7. + +[16]mkdir: cannot create directory '././nonexistent': Permission denied + + +LaTeX Warning: Reference `ELASTIC CHAP' on page 33 undefined on input line 50. + + +LaTeX Warning: Reference `Slip stress' on page 33 undefined on input line 63. + +[33 ]mMatrixPattern.cpp... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrixPattern.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrixPattern.h... Parsing file /build/reproducible-path/python-escript-5.6/paso/src/SystemMatrixPattern.h... @@ -5366,425 +4766,399 @@ Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/domainhelpers.h... Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.cpp... Parsing f +Underfull \hbox (badness 10000) in paragraph at lines 415--425 -LaTeX Warning: Citation `lazyauspdc' on page 72 undefined on input line 2248. - -) ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.112 \chapter - {Complex Geometries} -pdfTeX warning (ext4): destination with the same identifier (name{figure.3.4}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.112 \chapter - {Complex Geometries} [72] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.tex -Chapter 4. - -LaTeX Warning: Reference `LINEARPDE.SINGLE.3' on page 73 undefined on input lin -e 59. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 73 undefined on input lin -e 60. - - -LaTeX Warning: Reference `LINEARPDE.SINGLE.2' on page 73 undefined on input lin -e 60. - -[73 -Output written on install.pdf (28 pages, 176871 bytes). -Transcript written on install.log. -]>cd debian/tmp3/posix/doc/install && makeindex install.idx - ] - -LaTeX Warning: Reference `LINEARPDE.SINGLE.4' on page 74 undefined on input lin -e 132. - - -LaTeX Warning: Reference `CHAP: Tutorial' on page 74 undefined on input line 14 -6. +[17]>] [13 ] -[74]This is makeindex, version 2.16 [TeX Live 2022] (kpathsea + Thai support). -Scanning input file install.idx...done (0 entries accepted, 0 rejected). -Nothing written in install.ind. -Transcript written in install.ilg. ->] [34] -Chapter 4. +LaTeX Warning: Reference `Slip stress split' on page 34 undefined on input line + 85. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.texcd debian/tmp3/posix/doc/install && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{install.tex} install.tex +LaTeX Warning: Reference `Slip general problem' on page 34 undefined on input l +ine 85. -LaTeX Warning: Citation `Trilinos' on page 75 undefined on input line 181. +LaTeX Warning: Reference `Slip stress split 1' on page 34 undefined on input li +ne 90. -Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 -\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- -di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt -ions -[75] -LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96. +LaTeX Warning: Reference `Slip constraint' on page 34 undefined on input line 9 +2. -LaTeX Warning: Citation `AGRF' on page 27 undefined on input line 97. +LaTeX Warning: Reference `Slip natural fault' on page 34 undefined on input lin +e 92. -LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 163. +LaTeX Warning: Reference `ELASTIC CHAP' on page 34 undefined on input line 94. +LaTeX Warning: Reference `Fault System' on page 34 undefined on input line 97. -LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 163. +[34 ] +LaTeX Warning: Citation `ESCRIPT' on page 14 undefined on input line 138. -LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 192. +LaTeX Warning: Reference `FIG:P1:GRAV:1' on page 14 undefined on input line 152 +. +LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 14 undefined on input line 154 +. -LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 192. +LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 14 undefined on input line +155. -LaTeX Warning: Reference `FIG:P1:MAG:10' on page 27 undefined on input line 196 -. +LaTeX Warning: Reference `code: gravity1' on page 14 undefined on input line 18 +5. -LaTeX Warning: Reference `FIG:P1:MAG:11' on page 27 undefined on input line 196 +LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 14 undefined on input line 188 . -LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 197. - +LaTeX Warning: Reference `fig:domainBuilder' on page 14 undefined on input line + 189. -LaTeX Warning: Reference `FIG:P1:MAG:10' on page 27 undefined on input line 198 +LaTeX Warning: Reference `FIG:P1:GRAV:3' on page 14 undefined on input line 217 . -LaTeX Warning: Reference `FIG:P1:MAG:11' on page 27 undefined on input line 199 -. - -) [27This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. -] [28 +LaTeX Warning: Reference `sec:forward gravity' on page 14 undefined on input li +ne 226. -LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin -e 251. +[14] [15 ] -LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin -e 256. +LaTeX Warning: Reference `code: gravity1' on page 16 undefined on input line 23 +5. -LaTeX Warning: Reference `LINEARPDE.SYSTEM.5' on page 76 undefined on input lin -e 290. +LaTeX Warning: Citation `ESCRIPT' on page 16 undefined on input line 278. -LaTeX Warning: Reference `LINEARPDE.SINGLE.5' on page 76 undefined on input lin -e 290. +LaTeX Warning: Citation `ESCRIPTONLINE' on page 16 undefined on input line 278. -[76 ] [29 -LaTeX Warning: Reference `CHAP HEAT 2a' on page 35 undefined on input line 38. +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 282. -Underfull \hbox (badness 10000) in paragraph at lines 37--41 +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. -LaTeX Warning: Reference `fig:pycad rec' on page 35 undefined on input line 57. +LaTeX Warning: Reference `FIG:P1:GRAV:2' on page 16 undefined on input line 294 +. -[35] ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.tex [77] [30] -Chapter 3. -) [31] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.tex [32] -LaTeX Warning: Reference `ESCRIPT CHAP' on page 78 undefined on input line 418. +LaTeX Warning: Reference `FIG:P1:GRAV:0' on page 16 undefined on input line 299 +. +[16] -[78 [36 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.139 \begin{python} - ] +LaTeX Warning: Reference `ss:domcon' on page 18 undefined on input line 508. -LaTeX Warning: Reference `fig:pycad rec mesh' on page 37 undefined on input lin -e 187. +[18] +LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 17 undefined on + input line 324. -LaTeX Warning: Reference `fig:pycad rec' on page 37 undefined on input line 191 -. -[37] +LaTeX Warning: Citation `ERMAPPER' on page 17 undefined on input line 327. -LaTeX Warning: Reference `PROJ.1' on page 79 undefined on input line 474. +LaTeX Warning: Citation `NETCDF' on page 17 undefined on input line 327. -LaTeX Warning: Reference `SEC Solver Options' on page 79 undefined on input lin -e 483. -[79 [38 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.194 \clearpage - patch level 1 -L3 programming layer <2023-01-16> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.tex +LaTeX Warning: Reference `part2' on page 18 undefined on input line 433. -LaTeX Warning: Citation `Saad' on page 84 undefined on input line 938. +LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:REG' on page 18 undefined on input + line 470. -LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 943. +[18] +Underfull \hbox (badness 10000) in paragraph at lines 604--605 -LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 948. +Underfull \hbox (badness 10000) in paragraph at lines 604--605 -LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 952. +LaTeX Warning: Reference `Sec:2DHD' on page 19 undefined on input line 617. +[19] -LaTeX Warning: Citation `WEISS' on page 84 undefined on input line 973. +LaTeX Warning: Reference `fig:onedheatout1' on page 20 undefined on input line +671. +[20 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.4}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.680 \clearpage + ] [21 ]> -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty>] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty +LaTeX Warning: Reference `fig:slip.2' on page 36 undefined on input line 190. -LaTeX Warning: Reference `FIG LUMPING VALET A' on page 86 undefined on input li -ne 72. +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t +ex +LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 22 undefined on input line +647. -LaTeX Warning: Reference `FIG LUMPING VALET B' on page 86 undefined on input li -ne 78. +LaTeX Warning: Reference `SEC:P1:GRAV:DATA' on page 22 undefined on input line +664. -LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l -ine 89. +LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 22 undefined on + input line 665. -LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l -ine 89. +LaTeX Warning: Reference `FIG:P1:GRAV:onshoreoffshore' on page 22 undefined on +input line 674. -LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l -ine 96. +LaTeX Warning: Reference `FIG:P1:GRAV:onshoreoffshore' on page 22 undefined on +input line 680. -LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l -ine 96. +[22] ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.776 \clearpage + ] [5] [6] [7] [8] [9] +LaTeX Warning: Reference `part2' on page 23 undefined on input line 751. -LaTeX Warning: Reference `LUMPING WAVE VALET 2' on page 86 undefined on input l -ine 108. +) [10] [11] [12] [27] [29]) +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf + Ok [100] [109] [98] [99] [108]) +(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf + Ok [13] [18] [23] [21] [22] [23] [24] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.tex [25] [26] [28] [31] [32] [36] [39] [44] +[45] [46] [42] [47] [60] [61] [62] [77] [79 [24]ile /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler2D.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/LameAssembler3D.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/Ripley.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/Ripley.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/ripleycpp.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/ripleycpp.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleyDomain.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleyException.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleyException.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/RipleySystemMatrix.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/RipleySystemMatrix.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/system_dep.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/system_dep.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler2D.h... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.h... +Parsing file /build/reproducible-path/python-escript-5.6/ripley/src/WaveAssembler3D.h... +Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.cpp... +Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.h... +Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/AbstractAssembler.h... +Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/Brick.cpp... +Parsing file /build/reproducible-p] [87] [110] [91] [93] [94] [95] +[96] [126] [127]> ]ath/python-escript-5.6/speckley/src/Brick.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h... Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h... Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/BrickGradients.cpp... @@ -5828,91 +5202,119 @@ Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.cpp... Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h... -Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyD -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyD> ]mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated. -LaTeX Warning: Reference `eqn:Tform nabla' on page 39 undefined on input line 2 -00. +LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96. -Underfull \hbox (badness 10000) in paragraph at lines 197--202 +LaTeX Warning: Citation `AGRF' on page 27 undefined on input line 97. -LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 205. +LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 163. -LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 206. -LaTeX Warning: Reference `Sec:1DHDv0' on page 39 undefined on input line 213. +LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 163. -LaTeX Warning: Reference `eq:hom flux' on page 39 undefined on input line 224. +LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 192. -LaTeX Warning: Reference `NEUMAN 2' on page 39 undefined on input line 255. -LaTeX Warning: Reference `NEUMAN 2b' on page 39 undefined on input line 258. +LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 192. -LaTeX Warning: Reference `eq:inhom flux' on page 39 undefined on input line 258 + +LaTeX Warning: Reference `FIG:P1:MAG:10' on page 27 undefined on input line 196 . -LaTeX Warning: Reference `Sec:2DHD plot' on page 39 undefined on input line 266 +LaTeX Warning: Reference `FIG:P1:MAG:11' on page 27 undefined on input line 196 . -LaTeX Warning: Reference `fig:steady state heat' on page 39 undefined on input -line 269. +LaTeX Warning: Reference `FIG:P1:MAG:0' on page 27 undefined on input line 197. -[39] [40 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.3}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.276 \clearpage - ]) + + +LaTeX Warning: Reference `FIG:P1:MAG:10' on page 27 undefined on input line 198 +. + + +LaTeX Warning: Reference `FIG:P1:MAG:11' on page 27 undefined on input line 199 +. + +) [27]Install file: "escriptcore/src/index.h" as "debian/stage3/include/escript/index.h" + [28 ]>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 +r.enc} + ]> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okJointDUMMY.tex [30] +Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[][][][][][][][][][][][][][][][][][][][][][][][][] + +LaTeX Warning: Reference `fig:onedheatout' on page 23 undefined on input line 8 +12. + +) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -Underfull \hbox (badness 10000) in paragraph at lines 18--25 +mple02.tex +Chapter 3. +) +Underfull \hbox (badness 10000) in paragraph at lines 17--19 -LaTeX Warning: Reference `example4' on page 41 undefined on input line 26. +LaTeX Warning: Reference `fig:onedhdmodel' on page 23 undefined on input line 2 +1. -LaTeX Warning: Reference `fig:anticlinehrmodel' on page 41 undefined on input l -ine 28. +LaTeX Warning: Reference `Sec:1DHDv00' on page 23 undefined on input line 34. -[41 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.74 l30= - Line(p3, p0) ])) [35] -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty [36) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty] [37] [38]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.texomain.h... +[23]omain.h... Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyException.h... Parsing file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyException.h... Preprocessing /build/reproducible-path/python-escript-5.6/speckley/src/system_dep.h... @@ -5960,11 +5362,87 @@ Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyElements.h... Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyElements.h... Preprocessing /build/reproducible-path/python-escript-5.6/weip -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty>] [87 -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty) +Output written on install.pdf (28 pages, 177009 bytes). +Transcript written on install.log. +cd debian/tmp3/posix/doc/install && makeindex install.idx + +Chapter 4. + +LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30. + + +LaTeX Warning: Reference `sec:forward DCRES' on page 33 undefined on input line + 35. + + +LaTeX Warning: Reference `fig:HalfSphere' on page 33 undefined on input line 39 +. + +[33]This is makeindex, version 2.16 [TeX Live 2022] (kpathsea + Thai support). +Scanning input file install.idx...done (0 entries accepted, 0 rejected). +Nothing written in install.ind. +Transcript written in install.ilg. + [34 ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.110 I + t is important to remark here that if a Dirichlet boundary condition is +]Install file: "escriptcore/src/Distribution.h" as "debian/stage3/include/escript/Distribution.h" +This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. +Install file: "escriptcore/src/AbstractDomain.h" as "debian/stage3/include/escript/AbstractDomain.h" +Install file: "paso/src/Coupler.h" as "debian/stage3/include/paso/Coupler.h" +Install file: "escriptcore/src/AbstractSystemMatrix.h" as "debian/stage3/include/escript/AbstractSystemMatrix.h" +Install file: "paso/src/Pattern.h" as "debian/stage3/include/paso/Pattern.h" + + +LaTeX Warning: Reference `fig:onedheatout1 002' on page 25 undefined on input l +ine 116. + + +LaTeX Warning: Reference `fig:onedheatout 002' on page 25 undefined on input li +ne 119. + + +LaTeX Warning: Float too large for page by 10.55325pt on input line 146. + +) [25 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.7}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.108 \chapter + {Heat Diffusion in Two Dimensions} ]) [35] [36] [37] [38] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.tex Chapter 5. LaTeX Warning: Reference `Chp:ref:regularization' on page 39 undefined on input @@ -6000,8 +5478,7 @@ LaTeX Warning: Reference `chapter:ref:Drivers:Drivers' on page 39 undefined on input line 72. -[39) /build/reproducible-path/python-escript-5.6/escriptcore/src/ArrayOps.h:41: warning: the name 'LocalOps.h' supplied as the argument in the \file statement is not an input file - -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty])/build/reproducible-path/python-escript-5.6/escriptcore/src/system_dep.h:20: warning: the name 'escript/src/system_dep.h' supplied as the argument in the \file statement is not an input file - -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.styInstall file: "escriptcore/src/DataConstant.h" as "debian/stage3/include/escript/DataConstant.h" -) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)Install file: "escriptcore/src/DataException.h" as "debian/stage3/include/escript/DataException.h" -Install file: "escriptcore/src/DataExpanded.h" as "debian/stage3/include/escript/DataExpanded.h" -Install file: "escriptcore/src/DataLazy.h" as "debian/stage3/include/escript/DataLazy.h" -Install file: "escriptcore/src/DataReady.h" as "debian/stage3/include/escript/DataReady.h" -Install file: "escriptcore/src/DataTagged.h" as "debian/stage3/include/escript/DataTagged.h" -Install file: "escriptcore/src/DataVectorOps.h" as "debian/stage3/include/escript/DataVectorOps.h" -Install file: "escriptcore/src/Assert.h" as "debian/stage3/include/escript/Assert.h" -Install file: "paso/src/Paso.h" as "debian/stage3/include/paso/Paso.h" -Install file: "paso/src/PasoException.h" as "debian/stage3/include/paso/PasoException.h" - -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +ivers.tex [40 ] LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 41 undef ined on input line 14. @@ -6109,13 +5565,15 @@ LaTeX Warning: Reference `Chp:ref:domain builder' on page 41 undefined on input line 103. -[41 -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty]) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))Install file: "paso/src/SharedComponents.h" as "debian/stage3/include/paso/SharedComponents.h" -Install file: "escriptcore/src/AbstractDomain.h" as "debian/stage3/include/escript/AbstractDomain.h" -Install file: "escriptcore/src/DataVector.h" as "debian/stage3/include/escript/DataVector.h" -) +[41]>] +[26 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.108 \chapter + {Heat Diffusion in Two Dimensions} ] LaTeX Warning: Reference `Chp:cook:magnetic inversion' on page 42 undefined on input line 111. @@ -6190,8 +5648,6 @@ LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. [42] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input line 213. @@ -6215,11 +5671,22 @@ LaTeX Warning: Reference `Chp:ref:domain builder' on page 43 undefined on input line 233. -))) [43 -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty]) +)) [43] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.tex [44 -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def]) +mains.tex [44] + +LaTeX Warning: Reference `FIG:EX:DIRAC' on page 37 undefined on input line 75. + +)) [37 patch level 1 +L3 programming layer <2023-01-16> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/esys +doc.cls Chapter 6. LaTeX Warning: Reference `fig:cartesianDomain' on page 45 undefined on input li @@ -6245,47 +5712,39 @@ LaTeX Warning: Reference `REF:FIG:REF:10' on page 45 undefined on input line 79 . -[45 -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty> ] -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) [47 -))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty> -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty))] -(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty -Excluding comment 'comment') -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri -nfo.tex)>] -Writing index file install.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.aux +[45] +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2022/07/02 v1.4n Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) [46 ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty [47 ]>] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty +Chapter 3. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple03.tex +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def LaTeX Warning: Reference `equ:ref:coordinates:100' on page 48 undefined on inpu t line 211. @@ -6302,94 +5761,81 @@ Underfull \hbox (badness 10000) in paragraph at lines 261--261 [][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t ion can be sup-ported by build-ing sub-classes of the -[48 - -LaTeX Warning: Label `chap:flatpak' multiply defined. - -)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.aux)) - -LaTeX Warning: Reference `FIG LUMPING SUPG INC A' on page 88 undefined on input - line 170. - - -LaTeX Warning: Reference `FIG LUMPING SUPG INC B' on page 88 undefined on input - line 170. +[48]))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty) [49)] +Underfull \hbox (badness 10000) in paragraph at lines 22--23 -LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 -0. +Underfull \hbox (badness 10000) in paragraph at lines 22--23 -LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 +LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 3 0. -LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 -7. +LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 32. -LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 -7. +LaTeX Warning: Reference `fig:twodhdmodel' on page 27 undefined on input line 4 +6. -LaTeX Warning: Reference `FIG LUMPING SUPG A' on page 88 undefined on input lin -e 191. +LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 66. -LaTeX Warning: Reference `FIG LUMPING SUPG Ab' on page 88 undefined on input li -ne 197. +LaTeX Warning: Reference `eqn:hd' on page 27 undefined on input line 72. -LaTeX Warning: Reference `FIG LUMPING SUPG B' on page 88 undefined on input lin -e 204. +LaTeX Warning: Reference `Sec:1DHDv00' on page 27 undefined on input line 73. +[27) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty]) [50] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.tex +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) -LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21 -2. +LaTeX Warning: Reference `eqn:commonform nabla' on page 28 undefined on input l +ine 87. -LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21 -2. +LaTeX Warning: Reference `eqn:hdgenf' on page 28 undefined on input line 98. -LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21 -9. +LaTeX Warning: Reference `eqn:commonform2D' on page 28 undefined on input line +102. -LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 21 -9. +LaTeX Warning: Reference `ESCRIPT SET' on page 28 undefined on input line 113. -LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 22 -6. +LaTeX Warning: Reference `eqn: kappa general' on page 28 undefined on input lin +e 125. +[28 +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.141 \begin{python} + dummy) +Possible candidates: + 'DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' at line 1603 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' at line 1609 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::RealVectorType::reference escript::DataReady::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i)' at line 180 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h -LaTeX Warning: Reference `LUMPING SUPG 2' on page 88 undefined on input line 22 -6. +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4702: warning: no matching class member found for + DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) +Possible candidates: + 'DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' at line 1600 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' at line 1606 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::RealVectorType::const_reference escript::DataReady::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i) const' at line 175 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h -[88 ] Chapter 7. LaTeX Warning: Reference `REF:EQU:INTRO 1' on page 51 undefined on input line 1 @@ -6405,13 +5851,25 @@ LaTeX Warning: Reference `Chp:ref:regularization' on page 51 undefined on input line 68. -[51] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst -all.toc]) [3] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr -o.tex [4] -Chapter 1. -) +[51]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:5664: warning: documented symbol 'Data escript::condEvalWorker' was not declared or defined. +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1973: warning: no uniquely matching class member found for + DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) +Possible candidates: + 'DataTypes::real_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 625 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 628 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'DataTypes::real_t * escript::DataReady::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 51 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h + 'DataTypes::cplx_t * escript::DataReady::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 55 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h + +)/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:2005: warning: no uniquely matching class member found for + const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, std::complex< real_t > dummy) const +Possible candidates: + 'const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 611 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 614 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h + 'const DataTypes::real_t * escript::DataReady::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 59 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h + 'const DataTypes::cplx_t * escript::DataReady::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h + + +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) LaTeX Warning: Reference `chapter:ref:Minimization: costfunction class' on page 52 undefined on input line 96. @@ -6428,54 +5886,21 @@ LaTeX Warning: Reference `EQU:MIN:3b' on page 52 undefined on input line 111. -[52 [5]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat -pak.tex [6]> dummy) -Possible candidates: - 'DataTypes::RealVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' at line 1603 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'DataTypes::CplxVectorType::reference escript::Data::getDataAtOffsetRW(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' at line 1609 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'DataTypes::RealVectorType::reference escript::DataReady::getDataAtOffsetRW(DataTypes::RealVectorType::size_type i)' at line 180 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h - -]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:4702: warning: no matching class member found for - DataTypes::CplxVectorType::const_reference Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) -Possible candidates: - 'DataTypes::RealVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy)' at line 1600 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'DataTypes::CplxVectorType::const_reference escript::Data::getDataAtOffsetRO(DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' at line 1606 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'DataTypes::RealVectorType::const_reference escript::DataReady::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i) const' at line 175 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h - - -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp:5664: warning: documented symbol 'Data escript::condEvalWorker' was not declared or defined. -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1973: warning: no uniquely matching class member found for - DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) -Possible candidates: - 'DataTypes::real_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 625 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'DataTypes::cplx_t * escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 628 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'DataTypes::real_t * escript::DataReady::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0)' at line 51 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h - 'DataTypes::cplx_t * escript::DataReady::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy)' at line 55 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h - -)/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:2005: warning: no uniquely matching class member found for - const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, std::complex< real_t > dummy) const -Possible candidates: - 'const DataTypes::real_t * escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 611 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'const DataTypes::cplx_t * escript::Data::getSampleDataRO(DataTypes::CplxVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 614 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h - 'const DataTypes::real_t * escript::DataReady::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const' at line 59 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h - 'const DataTypes::cplx_t * escript::DataReady::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::cplx_t dummy) const' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataReady.h - - -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) +[53]) LaTeX Warning: Citation `Nocedal2006' on page 54 undefined on input line 256. @@ -6485,15 +5910,8 @@ ) [54] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.tex) [7] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond -a.tex [8]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1029: warning: no matching class member found for - DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) const -Possible candidates: - 'DataTypes::RealVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) const' at line 422 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h - 'DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy) const' at line 429 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h - - +stFunctions.tex +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) Chapter 8. LaTeX Warning: Reference `chapter:ref:Drivers' on page 55 undefined on input li @@ -6511,15 +5929,93 @@ LaTeX Warning: Reference `chapter:ref:Minimization' on page 55 undefined on inp ut line 12. -[55 -Chapter 3. -)/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1040: warning: no matching class member found for +[55] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty + +LaTeX Warning: Reference `chapter:ref:Minimization: costfunction class' on page + 56 undefined on input line 61. + + +LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input + line 65. + + +LaTeX Warning: Reference `Chp:ref:mapping' on page 56 undefined on input line 6 +7. + + +LaTeX Warning: Reference `Chp:ref:forward models' on page 56 undefined on input + line 72. + + +LaTeX Warning: Reference `sec:ref:reference systems' on page 56 undefined on in +put line 79. + + +LaTeX Warning: Citation `ESCRIPT' on page 56 undefined on input line 83. + + +LaTeX Warning: Reference `REF:EQU:DRIVE:10' on page 56 undefined on input line +90. + + +LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input + line 99. + + +LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input + line 121. + +[56]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1029: warning: no matching class member found for + DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) const +Possible candidates: + 'DataTypes::RealVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) const' at line 422 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h + 'DataTypes::CplxVectorType::const_reference escript::DataTagged::getDataByTagRO(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy) const' at line 429 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h + +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.cpp:1040: warning: no matching class member found for DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) Possible candidates: 'DataTypes::RealVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' at line 419 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h 'DataTypes::CplxVectorType::reference escript::DataTagged::getDataByTagRW(int tag, DataTypes::CplxVectorType::size_type i, DataTypes::cplx_t dummy)' at line 426 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h -]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:745: warning: no matching class member found for + + +LaTeX Warning: Reference `eqn: kappa general' on page 29 undefined on input lin +e 144. + + +LaTeX Warning: Reference `NEUMAN 2' on page 29 undefined on input line 147. + + +LaTeX Warning: Reference `Sec:1DHDv00' on page 29 undefined on input line 169. + + +LaTeX Warning: Float too large for page by 12.55325pt on input line 232. + +[29 +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty + +LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page + 57 undefined on input line 181. + + +LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page + 57 undefined on input line 186. + +[57]] + +LaTeX Warning: Reference `chapter:ref:Minimization' on page 58 undefined on inp +ut line 220. + + +LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page + 58 undefined on input line 246. + + +LaTeX Warning: Reference `REF:EQU:INTRO 2b' on page 58 undefined on input line +247. + +[58)]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:745: warning: no matching class member found for DataTypes::CplxVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, std::complex< real_t > dummy) Possible candidates: 'DataTypes::RealVectorType::reference escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0)' at line 514 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h @@ -6529,17 +6025,15 @@ void escript::DataTypes::pointToStream(std::ostream &os, const CplxVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep) Possible candidates: 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h - [9/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:131: warning: no matching file member found for +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:131: warning: no matching file member found for void escript::DataTypes::pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep, const std::string &sep) Possible candidates: 'void pointToStream(std::ostream &os, const RealVectorType::ElementType *data, const ShapeType &shape, int offset, bool needsep=true, const std::string &sep=",")' at line 63 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h -] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock -er.tex/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:421: warning: no matching file member found for +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:421: warning: no matching file member found for std::string escript::DataTypes::pointToString(const escript::DataTypes::DataVectorAlt< cplx_t > &data, const ShapeType &shape, int offset, const std::string &prefix) Possible candidates: 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h - [10/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:558: warning: no matching file member found for +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.cpp:558: warning: no matching file member found for void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< real_t > &dest, RealVectorType::size_type doffset, RealVectorType::size_type nvals, const RealVectorType &src, RealVectorType::size_type soffset) Possible candidates: 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h @@ -6547,7 +6041,7 @@ void escript::DataTypes::copyPoint(escript::DataTypes::DataVectorAlt< cplx_t > &dest, CplxVectorType::size_type doffset, CplxVectorType::size_type nvals, const CplxVectorType &src, CplxVectorType::size_type soffset) Possible candidates: 'void copyPoint(RealVectorType &dest, vec_size_type doffset, vec_size_type nvals, const RealVectorType &src, vec_size_type soffset)' at line 137 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h -]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h:126: warning: no matching file member found for +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h:126: warning: no matching file member found for std::string escript::DataTypes::pointToString(const &data, const std::vector< int > &shape, int offset, const std::string &prefix) Possible candidates: 'std::string pointToString(const RealVectorType &data, const ShapeType &shape, int offset, const std::string &prefix)' at line 122 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVector.h @@ -6576,71 +6070,76 @@ Possible candidates: 'bool vectorHasNaN(const DataTypes::RealVectorType &in, DataTypes::RealVectorType::size_type inOffset, size_t count)' at line 1473 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h -Chapter 4. -) - -LaTeX Warning: Reference `chapter:ref:Minimization: costfunction class' on page - 56 undefined on input line 61. - -LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input - line 65. +LaTeX Warning: Reference `REF:EQU:costfunction 100b' on page 59 undefined on in +put line 281. -LaTeX Warning: Reference `Chp:ref:mapping' on page 56 undefined on input line 6 -7. +LaTeX Warning: Reference `REF:EQU:costfunction 100' on page 59 undefined on inp +ut line 332. -LaTeX Warning: Reference `Chp:ref:forward models' on page 56 undefined on input - line 72. +LaTeX Warning: Reference `REF:EQU:costfunction 100d' on page 59 undefined on in +put line 334. -LaTeX Warning: Reference `sec:ref:reference systems' on page 56 undefined on in -put line 79. - +LaTeX Warning: Reference `REF:EQU:costfunction 100b' on page 59 undefined on in +put line 335. -LaTeX Warning: Citation `ESCRIPT' on page 56 undefined on input line 83. +LaTeX Warning: Reference `REF:EQU:costfunction 100d' on page 59 undefined on in +put line 344. -LaTeX Warning: Reference `REF:EQU:DRIVE:10' on page 56 undefined on input line -90. +[59]) [60] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.tex +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +Chapter 9. +LaTeX Warning: Reference `fig:domainBuilder' on page 61 undefined on input line + 19. -LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input - line 99. +[61 ] +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)>]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex +(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) [38] +LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in +put line 44. -LaTeX Warning: Reference `Chp:ref:regularization' on page 56 undefined on input - line 121. -[56 [11]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour -ce.tex [12]Install file: "dudley/src/ElementType.h" as "debian/stage3/include/dudley/ElementType.h" +LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in +put line 53. -Chapter 5. -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page - 57 undefined on input line 181. +LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li +ne 62. -LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page - 57 undefined on input line 186. +LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li +ne 65. -[57] [13] +[62] +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty -LaTeX Warning: Reference `chapter:ref:Minimization' on page 58 undefined on inp -ut line 220. +LaTeX Warning: Reference `sec: plot T' on page 30 undefined on input line 243. +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fdInstall file: "escriptcore/src/SystemMatrixException.h" as "debian/stage3/include/escript/SystemMatrixException.h" +)) -LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page - 58 undefined on input line 246. +LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. -LaTeX Warning: Reference `REF:EQU:INTRO 2b' on page 58 undefined on input line -247. +LaTeX Warning: Reference `sec:ref:reference systems' on page 63 undefined on in +put line 204. -[58/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1297: warning: no uniquely matching class member found for +[63 +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty])Install file: "paso/src/Paso.h" as "debian/stage3/include/paso/Paso.h" +Install file: "paso/src/PasoException.h" as "debian/stage3/include/paso/PasoException.h" +/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1297: warning: no uniquely matching class member found for void dudley::DudleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const Possible candidates: 'virtual void escript::AbstractContinuousDomain::setToIntegrals(std::vector< DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 194 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/AbstractContinuousDomain.h @@ -6654,7 +6153,7 @@ 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const' at line 506 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const' at line 508 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h -]/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1303: warning: no uniquely matching class member found for +/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.cpp:1303: warning: no uniquely matching class member found for void dudley::DudleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const Possible candidates: 'virtual void escript::AbstractContinuousDomain::setToIntegrals(std::vector< DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 194 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/AbstractContinuousDomain.h @@ -6668,46 +6167,83 @@ 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const' at line 506 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const' at line 508 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h - [14Install file: "dudley/src/NodeMapping.h" as "debian/stage3/include/dudley/NodeMapping.h" -/build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp:139: warning: no matching class member found for +Install file: "paso/src/SharedComponents.h" as "debian/stage3/include/paso/SharedComponents.h" + + +LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277. + +[64]Install file: "escriptcore/src/ES_optype.h" as "debian/stage3/include/escript/ES_optype.h" +Install file: "escriptcore/src/LapackInverseHelper.h" as "debian/stage3/include/escript/LapackInverseHelper.h" +Install file: "escriptcore/src/DataVectorAlt.h" as "debian/stage3/include/escript/DataVectorAlt.h" +Install file: "escriptcore/src/DataVectorTaipan.h" as "debian/stage3/include/escript/DataVectorTaipan.h" + +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +Chapter 2. + +LaTeX Warning: Reference `FirstSteps' on page 39 undefined on input line 31. + + +LaTeX Warning: Citation `OPENMP' on page 39 undefined on input line 46. + + +LaTeX Warning: Citation `MPI' on page 39 undefined on input line 47. + +[39]/build/reproducible-path/python-escript-5.6/dudley/src/NodeFile_createDenseLabelings.cpp:139: warning: no matching class member found for dim_t dudley::NodeFile::createDenseNodeLabeling(std::vector< index_t > &nodeDistribution, const std::vector< index_t > &dofDistribution) Possible candidates: 'dim_t dudley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' at line 90 of file /build/reproducible-path/python-escript-5.6/dudley/src/NodeFile.h 'dim_t finley::NodeFile::createDenseNodeLabeling(IndexVector &nodeDistribution, const IndexVector &dofDistribution)' at line 106 of file /build/reproducible-path/python-escript-5.6/finley/src/NodeFile.h -Install file: "escriptcore/src/AbstractTransportProblem.h" as "debian/stage3/include/escript/AbstractTransportProblem.h" -] -LaTeX Warning: Reference `REF:EQU:costfunction 100b' on page 59 undefined on in -put line 281. +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 65 undefined on + input line 309. -LaTeX Warning: Reference `REF:EQU:costfunction 100' on page 59 undefined on inp -ut line 332. +LaTeX Warning: Reference `sec:ref:reference systems' on page 65 undefined on in +put line 311. -LaTeX Warning: Reference `REF:EQU:costfunction 100d' on page 59 undefined on in -put line 334. +LaTeX Warning: Citation `NETCDF' on page 65 undefined on input line 318. -LaTeX Warning: Reference `REF:EQU:costfunction 100b' on page 59 undefined on in -put line 335. +LaTeX Warning: Citation `matplotlib' on page 65 undefined on input line 328. -LaTeX Warning: Reference `REF:EQU:costfunction 100d' on page 59 undefined on in -put line 344. -[59>/build/reproducible-path/python-escript-5.6/finley/src/ElementFile.cpp:205: warning: no matching class member found for +LaTeX Warning: Reference `SEC:P1:GRAV:REMARK:DATAHOLES' on page 65 undefined on + input line 358. + + +LaTeX Warning: Reference `sec:ref:reference systems' on page 65 undefined on in +put line 359. + +[65]/build/reproducible-path/python-escript-5.6/finley/src/ElementFile.cpp:205: warning: no matching class member found for void finley::ElementFile::relabelNodes(const std::vector< index_t > &newNode, index_t offset) Possible candidates: 'void dudley::ElementFile::relabelNodes(const index_t *newNode, index_t offset)' at line 85 of file /build/reproducible-path/python-escript-5.6/dudley/src/ElementFile.h 'void finley::ElementFile::relabelNodes(const IndexVector &newNode, index_t offset)' at line 93 of file /build/reproducible-path/python-escript-5.6/finley/src/ElementFile.h -]]))) [89 &integrals, const escript::Data &arg) const Possible candidates: 'virtual void escript::AbstractContinuousDomain::setToIntegrals(std::vector< DataTypes::real_t > &integrals, const escript::Data &arg) const' at line 194 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/AbstractContinuousDomain.h @@ -6721,8 +6257,6 @@ 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const' at line 506 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const' at line 508 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h -Install file: "escriptcore/src/ArrayOps.h" as "debian/stage3/include/escript/ArrayOps.h" -Install file: "escriptcore/src/ES_optype.h" as "debian/stage3/include/escript/ES_optype.h" /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.cpp:1705: warning: no uniquely matching class member found for void finley::FinleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const Possible candidates: @@ -6737,45 +6271,62 @@ 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< real_t > &integrals, const escript::Data &arg) const' at line 506 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h 'virtual void speckley::SpeckleyDomain::setToIntegrals(std::vector< cplx_t > &integrals, const escript::Data &arg) const' at line 508 of file /build/reproducible-path/python-escript-5.6/speckley/src/SpeckleyDomain.h -Install file: "escriptcore/src/WrappedArray.h" as "debian/stage3/include/escript/WrappedArray.h" -Install file: "paso/src/Pattern.h" as "debian/stage3/include/paso/Pattern.h" -/build/reproducible-path/python-escript-5.6/paso/src/Options.cpp:31: warning: no matching class member found for + +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty +Chapter 10. + +LaTeX Warning: Citation `GALLARDO2005a' on page 67 undefined on input line 28. + +[67])/build/reproducible-path/python-escript-5.6/paso/src/Options.cpp:31: warning: no matching class member found for paso::Options::Options(const bp::object &options) Possible candidates: 'paso::Options::Options()' at line 81 of file /build/reproducible-path/python-escript-5.6/paso/src/Options.h 'paso::Options::Options(const boost::python::object &options)' at line 84 of file /build/reproducible-path/python-escript-5.6/paso/src/Options.h -Chapter 9. -LaTeX Warning: Reference `fig:domainBuilder' on page 61 undefined on input line - 19. +LaTeX Warning: Reference `ref:EQU:REG:7' on page 68 undefined on input line 96. -[61 ] -Underfull \hbox (badness 10000) in paragraph at lines 159--160 -Underfull \hbox (badness 10000) in paragraph at lines 207--208 +LaTeX Warning: Reference `ref:EQU:REG:5' on page 68 undefined on input line 98. -[15] -LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in -put line 44. +LaTeX Warning: Reference `ref:EQU:REG:6' on page 68 undefined on input line 99. -LaTeX Warning: Reference `sec:ref:reference systems' on page 62 undefined on in -put line 53. -LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li -ne 62. +LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page + 68 undefined on input line 147. +[68]) [69] +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma +pping.tex [70] +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty -LaTeX Warning: Reference `fig:cartesianDomain' on page 62 undefined on input li -ne 65. +LaTeX Warning: Reference `fig:mayavi window' on page 31 undefined on input line + 360. -[62]/build/reproducible-path/python-escript-5.6/ripley/src/Brick.cpp:3684: warning: no uniquely matching class member found for + +LaTeX Warning: Reference `fig:mayavi window2' on page 31 undefined on input lin +e 365. + +) [31 [40]])) [32 +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.112 \chapter + {Complex Geometries} &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const Possible candidates: 'virtual escript::Data escript::AbstractDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const =0' at line 412 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/AbstractDomain.h @@ -6795,25 +6346,14 @@ 'escript::Data ripley::Rectangle::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 290 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h 'escript::Data speckley::Brick::randomFillWorker(const escript::DataTypes::ShapeType &shape, long seed, const boost::python::tuple &filter) const' at line 337 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h +])) [72] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardModels.tex +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def +Chapter 12. - -LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. - - -LaTeX Warning: Reference `sec:ref:reference systems' on page 63 undefined on in -put line 204. - -[63] -Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[16]Install file: "escriptcore/src/LapackInverseHelper.h" as "debian/stage3/include/escript/LapackInverseHelper.h" -Install file: "paso/src/system_dep.h" as "debian/stage3/include/paso/system_dep.h" -Install file: "escriptcore/src/DataVectorAlt.h" as "debian/stage3/include/escript/DataVectorAlt.h" - - -LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277. - -[64]>/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp:2532: warning: no uniquely matching class member found for +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardGravity.tex))/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.cpp:2532: warning: no uniquely matching class member found for escript::Data ripley::Rectangle::randomFill(const std::vector< int > &shape, const escript::FunctionSpace &what, long seed, const bp::tuple &filter) const Possible candidates: 'virtual escript::Data escript::AbstractDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const =0' at line 412 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/AbstractDomain.h @@ -6826,139 +6366,8 @@ 'virtual escript::Data speckley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h - &shape, const escript::FunctionSpace &fs, long seed, const bp::tuple &filter) const -Possible candidates: - 'virtual escript::Data escript::AbstractDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const =0' at line 412 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/AbstractDomain.h - 'virtual escript::Data escript::NullDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 139 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/NullDomain.h - 'virtual escript::Data escript::TestDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 102 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/TestDomain.h - 'virtual escript::Data dudley::DudleyDomain::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 681 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h - 'virtual escript::Data finley::FinleyDomain::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 810 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h - 'virtual escript::Data ripley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 193 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h - 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h - 'virtual escript::Data speckley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h - 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h - - [20]]) [21] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 -1.tex [22] - -LaTeX Warning: Reference `ref:EQU:REG:7' on page 68 undefined on input line 96. - - - -LaTeX Warning: Reference `ref:EQU:REG:5' on page 68 undefined on input line 98. - - - -LaTeX Warning: Reference `ref:EQU:REG:6' on page 68 undefined on input line 99. - - -LaTeX Warning: Reference `chapter:ref:inversion cost function:gradient' on page - 68 undefined on input line 147. - -[68 -Appendix A. -) [23])] [69 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril -inos.tex [24>]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.tex] [90 {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 -r.enc} - -Chapter 12. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardGravity.tex< +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) [41 LaTeX Warning: Reference `ref:GRAV:EQU:101' on page 73 undefined on input line 37. @@ -6979,11 +6388,10 @@ LaTeX Warning: Reference `ref:GRAV:EQU:100' on page 73 undefined on input line 89. -[73/usr/share/texlive/texmf-dist/fonts/ -type1/urw/times/utmri8a.pfb]> -Output written on install.pdf (28 pages, 179852 bytes). -Transcript written on install.log. - +[73]] [42] +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.tex LaTeX Warning: Reference `ref:GRAV:EQU:12' on page 74 undefined on input line 9 9. @@ -7012,7 +6420,9 @@ LaTeX Warning: Reference `ref:GRAV:EQU:9' on page 74 undefined on input line 16 4. -[74] +[74)]Install file: "escriptcore/src/TransportProblemException.h" as "debian/stage3/include/escript/TransportProblemException.h" +Install file: "escriptcore/src/IndexList.h" as "debian/stage3/include/escript/IndexList.h" + LaTeX Warning: Reference `ref:GRAV:EQU:10' on page 75 undefined on input line 1 70. @@ -7022,6 +6432,7 @@ 194. ) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardMagnetic.tex @@ -7046,7 +6457,24 @@ LaTeX Warning: Reference `chapter:ref:inversion cost function' on page 75 undef ined on input line 65. -[75] +[75]> &shape, const escript::FunctionSpace &fs, long seed, const bp::tuple &filter) const +Possible candidates: + 'virtual escript::Data escript::AbstractDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const =0' at line 412 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/AbstractDomain.h + 'virtual escript::Data escript::NullDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 139 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/NullDomain.h + 'virtual escript::Data escript::TestDomain::randomFill(const DataTypes::ShapeType &shape, const FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 102 of file /build/reproducible-path/python-escript-5.6/escriptcore/src/TestDomain.h + 'virtual escript::Data dudley::DudleyDomain::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 681 of file /build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h + 'virtual escript::Data finley::FinleyDomain::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 810 of file /build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h + 'virtual escript::Data ripley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 193 of file /build/reproducible-path/python-escript-5.6/ripley/src/Brick.h + 'virtual escript::Data ripley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 196 of file /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h + 'virtual escript::Data speckley::Brick::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 191 of file /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h + 'virtual escript::Data speckley::Rectangle::randomFill(const escript::DataTypes::ShapeType &shape, const escript::FunctionSpace &what, long seed, const boost::python::tuple &filter) const' at line 192 of file /build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h + + +Chapter 3. +[43 LaTeX Warning: Reference `ref:EQU:REG:6b' on page 76 undefined on input line 10 1. @@ -7071,9 +6499,7 @@ LaTeX Warning: Reference `ref:MAG:EQU:201' on page 76 undefined on input line 1 47. -[76]>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex +[76]] LaTeX Warning: Reference `ref:MAG:EQU:201' on page 77 undefined on input line 1 73. @@ -7099,6 +6525,36 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardMagneticIntensity.tex +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 +. + + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 79 +. + + +Underfull \hbox (badness 1648) in paragraph at lines 79--79 +[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac +es in []. An ar-row in-di-cates that a func-tion in the + +LaTeX Warning: Citation `LBB' on page 44 undefined on input line 83. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 88. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 107. + + +LaTeX Warning: Reference `ESCRIPT DEP' on page 44 undefined on input line 119. + + +LaTeX Warning: Reference `SEC Projection' on page 44 undefined on input line 12 +1. + +[44) ] + LaTeX Warning: Reference `sec:forward magnetic' on page 78 undefined on input l ine 28. @@ -7110,82 +6566,9 @@ LaTeX Warning: Reference `ref:EQU:REG:6b' on page 78 undefined on input line 79 . -[78a/src/RipleyNodes.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/RipleyNodes.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyDomain.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyElements.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/SpeckleyNodes.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItControl.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/VisItData.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/vtkCellType.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/vtkCellType.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/weipa.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/weipa.h... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/weipacpp.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/weipacpp.cpp... -Preprocessing /build/reproducible-path/python-escript-5.6/weipa/src/WeipaException.h... -Parsing file /build/reproducible-path/python-escript-5.6/weipa/src/WeipaException.h... -Building macro definition list... -Building group list... -Building directory list... -Building namespace list... -Building file list... -Building class list... -Building concept list... -Computing nesting relations for classes... -Associating documentation with classes... -Associating documentation with concepts... -Building example list... -Searching for enumerations... -Searching for documented typedefs... -Searching for members imported via using declarations... -Searching for included using directives... -Searching for documented variables... -Building interface member list... -Building member list... -Searching for friends... -Searching for documented defines... -Computing class inheritance relations... -Computing class usage relations... -Flushing cached template relations that have become invalid... -Computing class relations... -Add enum values to enums... -Searching for member function documentation... -Creating members for template instances... -Building page list... -Search for main page... -Computing page relations... -Determining the scope of groups... -Sorting lists... -Determining which enums are documented -Computing member relations... -Building full member lists recursively... -Adding members to member groups. -Computing member references... -Inheriting documentation... -Generating disk names... -Adding source references... -Adding xrefitems... -Sorting member lists... -Setting anonymous enum type... -C] +[78] +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty LaTeX Warning: Reference `ref:MAG:EQU:8' on page 79 undefined on input line 97. @@ -7212,12 +6595,14 @@ ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardSelfMagnetic.tex [79] -Chapter 5. +rwardSelfMagnetic.tex)) [79>] ] [33 (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardDCRES.tex +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.3}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.112 \chapter + {Complex Geometries} +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.4}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.112 \chapter + {Complex Geometries} ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) LaTeX Warning: Citation `rucker2006three' on page 84 undefined on input line 32 . [84] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/elis +t.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty LaTeX Warning: Citation `LOKE2014' on page 85 undefined on input line 62. @@ -7386,8 +6861,17 @@ LaTeX Warning: Citation `LOKE2014' on page 86 undefined on input line 124. -) [93 ]) [86] +) +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) [86))] +(/usr/share/texlive/texmf-dist/tex/latex/comment/comment.sty +Excluding comment 'comment' + +LaTeX Warning: Reference `sec:datamanager' on page 48 undefined on input line 3 +68. + +[48) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/veri +nfo.tex)] No file inversion.ind. No file inversion.bbl. @@ -7400,7 +6884,9 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co okMagnetic.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.aux) +okJointDUMMY.aux +Writing index file install.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co okDcRes.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In @@ -7410,15 +6896,18 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi nimization.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.aux) +stFunctions.aux)) [49 (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.aux) +taSources.aux)] +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re gularization.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma pping.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) +rwardModels.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.aux)) LaTeX Warning: There were undefined references. @@ -7431,761 +6920,520 @@ (rerunfilecheck) or use package `bookmark'. ) -(see the transcript file for additional information){/usr/share/texlive/texmf-d +(see the transcript file for additional information){ +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.aux/usr/share/texlive/texmf-d ist/fonts/enc/dvips/base/8r.enc}<)/usr/share/texlive/texmf-dist/fonts/type1/public/ams +fonts/cm/cmbx5.pfb +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.aux)> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.aux [50] + +LaTeX Warning: Label `chap:flatpak' multiply defined. + +)) - -LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 219. - - -LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 251. - -[94 ]> [51]>< (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm /cmr8.pfb>)) - [95]>Install file: "dudley/src/Assemble.h" as "debian/stage3/include/dudley/Assemble.h" -Install file: "dudley/src/IndexList.h" as "debian/stage3/include/dudley/IndexList.h" -Install file: "escriptcore/src/DataFactory.h" as "debian/stage3/include/escript/DataFactory.h" -Install file: "escriptcore/src/Random.h" as "debian/stage3/include/escript/Random.h" - - -LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 339. - - -LaTeX Warning: Reference `fig:PYCAD 5' on page 96 undefined on input line 358. +/uhvb8a.pfb> +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd<)/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> +< +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb> +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) [52}/usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb>] [34] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/docg +uide.tex]) +Chapter 4. -[96 ] -Output written on inversion.pdf (86 pages, 5272754 bytes). +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple04.tex [2] +Output written on inversion.pdf (86 pages, 5273143 bytes). Transcript written on inversion.log. - [97]cd debian/tmp3/posix/doc/inversion && bibtex inversion - [98]Install file: "escriptcore/src/AbstractReducer.h" as "debian/stage3/include/escript/AbstractReducer.h" - - -LaTeX Warning: Citation `GMSH' on page 99 undefined on input line 579. - - -LaTeX Warning: Citation `RIGHTHANDRULE' on page 99 undefined on input line 600. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.toc +Underfull \vbox (badness 1348) has occurred while \output is active [53])cd debian/tmp3/posix/doc/inversion && bibtex inversion + [3] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.tex [4]Install file: "paso/src/Options.h" as "debian/stage3/include/paso/Options.h" -[99] - -LaTeX Warning: Citation `GMSH' on page 100 undefined on input line 682. - -[100]Install file: "paso/src/Options.h" as "debian/stage3/include/paso/Options.h" -Install file: "paso/src/Solver.h" as "debian/stage3/include/paso/Solver.h" -Install file: "paso/src/SparseMatrix.h" as "debian/stage3/include/paso/SparseMatrix.h" -This is BibTeX, Version 0.99d (TeX Live 2022/Debian) +Chapter 1. +)Install file: "paso/src/Solver.h" as "debian/stage3/include/paso/Solver.h" + [5Install file: "paso/src/SparseMatrix.h" as "debian/stage3/include/paso/SparseMatrix.h" +Install file: "paso/src/system_dep.h" as "debian/stage3/include/paso/system_dep.h" +] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.tex [6This is BibTeX, Version 0.99d (TeX Live 2022/Debian) The top-level auxiliary file: inversion.aux The style file: plain.bst Database file #1: inversion.bib +]cd debian/tmp3/posix/doc/inversion && makeindex inversion.idx +Chapter 2. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty -LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 698. - - -LaTeX Warning: Citation `IDEAS' on page 101 undefined on input line 702. - - -LaTeX Warning: Citation `VRML' on page 101 undefined on input line 706. - - -LaTeX Warning: Citation `STL' on page 101 undefined on input line 710. - - -LaTeX Warning: Citation `NASTRAN' on page 101 undefined on input line 714. - - -LaTeX Warning: Citation `MEDIT' on page 101 undefined on input line 718. - - -LaTeX Warning: Citation `CGNS' on page 101 undefined on input line 722. - - -LaTeX Warning: Citation `PLOT3D' on page 101 undefined on input line 726. - - -LaTeX Warning: Citation `DIFFPACK' on page 101 undefined on input line 730. +LaTeX Warning: Reference `chap:ripley' on page 54 undefined on input line 880. -LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 734. +LaTeX Warning: Citation `gaussfilter' on page 54 undefined on input line 909. +[54 -LaTeX Warning: Citation `TETGEN' on page 101 undefined on input line 734. +LaTeX Warning: Reference `CHAP HEAT 2a' on page 35 undefined on input line 38. -LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 738. +Underfull \hbox (badness 10000) in paragraph at lines 37--41 -LaTeX Warning: Citation `NETGEN' on page 101 undefined on input line 742. +LaTeX Warning: Reference `fig:pycad rec' on page 35 undefined on input line 57. -[101]cd debian/tmp3/posix/doc/inversion && makeindex inversion.idx - [102]) [103] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -tex [104] -Chapter 6. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess -olver.texThis is makeindex, version 2.16 [TeX Live 2022] (kpathsea + Thai support). +[35]]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.styThis is makeindex, [55version 2.16 [TeX Live 2022] (kpathsea + Thai support). Scanning input file inversion.idx....done (105 entries accepted, 0 rejected). Sorting entries....done (779 comparisons). Generating output file inversion.ind....done (94 lines written, 0 warnings). Output written in inversion.ind. Transcript written in inversion.ilg. - - -LaTeX Warning: Reference `Stokes 1' on page 105 undefined on input line 50. - - -LaTeX Warning: Reference `Stokes 2' on page 105 undefined on input line 50. - - -LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 105 undefined on input line -69. - - -LaTeX Warning: Citation `MBENZI2005' on page 105 undefined on input line 69. - - -LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 73. - - -LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 88. - -[105] - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 95. - - -LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li -ne 98. - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 98. - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 113. - - -LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li -ne 117. - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 118. - - -LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li -ne 121. - - -LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li -ne 125. - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 139. - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 143. - - -LaTeX Warning: Citation `ELMAN' on page 106 undefined on input line 148. - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 160. - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li -ne 169. - -[106]cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex - - -LaTeX Warning: Reference `STOKES total V1' on page 107 undefined on input line -187. - - -LaTeX Warning: Reference `STOKES total P2' on page 107 undefined on input line -187. - - -LaTeX Warning: Reference `STOKES total V2' on page 107 undefined on input line -187. - - -LaTeX Warning: Reference `STOKES STOPPING CRITERIA' on page 107 undefined on in -put line 221. - - -LaTeX Warning: Reference `STOKES TOL1' on page 107 undefined on input line 256. - - - -LaTeX Warning: Reference `STOKES TOL2' on page 107 undefined on input line 257. - - - -LaTeX Warning: Reference `STOKES EST 1' on page 107 undefined on input line 264 -. - - -LaTeX Warning: Reference `STOKES EST 2' on page 107 undefined on input line 264 -. - -[107] - -LaTeX Warning: Reference `STOKES TOL1' on page 108 undefined on input line 305. - - - -LaTeX Warning: Reference `STOKES ITER STEP 1' on page 108 undefined on input li -ne 306. - - -LaTeX Warning: Reference `STOKES LARGE BV1' on page 108 undefined on input line - 308. - - -LaTeX Warning: Reference `STOKES TOL2' on page 108 undefined on input line 310. - - - -LaTeX Warning: Reference `STOKES ITER STEP 2' on page 108 undefined on input li -ne 311. - - -LaTeX Warning: Reference `STOKES STOPPING CRITERIA' on page 108 undefined on in -put line 319. - -[108]Install file: "debian/tmp3/posix/doc/install/install.pdf" as "debian/stage3/release/doc/install/install.r-2.pdf" - - -LaTeX Warning: Citation `LBB' on page 109 undefined on input line 334. - - -LaTeX Warning: Reference `STOKES ITER STEP 1' on page 109 undefined on input li -ne 398. - - -LaTeX Warning: Reference `STOKES P OPERATOR' on page 109 undefined on input lin -e 398. - - -LaTeX Warning: Reference `STOKES P PREC' on page 109 undefined on input line 40 -2. - -[109]This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) +]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty)cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex +) [56] [7] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.tex [8] [36 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.139 \begin{python} + ]) - -LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 28. - - -LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 55. - - -LaTeX Warning: Reference `IKM-EQU-5' on page 113 undefined on input line 57. - - -LaTeX Warning: Reference `IKM-EQU-4' on page 113 undefined on input line 57. - - -LaTeX Warning: Reference `IKM-EQU-2' on page 113 undefined on input line 61. - -[113] - -LaTeX Warning: Reference `IKM-EQU-3' on page 114 undefined on input line 91. - - -LaTeX Warning: Reference `IKM-EQU-8c' on page 114 undefined on input line 120. - - -LaTeX Warning: Reference `IKM-EQU-2b' on page 114 undefined on input line 121. - - -LaTeX Warning: Reference `IKM-EQU-10' on page 114 undefined on input line 126. - - -LaTeX Warning: Reference `IKM-EQU-1' on page 114 undefined on input line 126. - - -LaTeX Warning: Reference `IKM-EQU-2' on page 114 undefined on input line 132. - - -LaTeX Warning: Reference `STOKES SOLVE' on page 114 undefined on input line 133 -. - - -LaTeX Warning: Reference `IKM-EQU-44' on page 114 undefined on input line 157. - - -LaTeX Warning: Reference `IKM-EQU-45' on page 114 undefined on input line 158. - -[114] - -LaTeX Warning: Citation `LBB' on page 115 undefined on input line 206. - -[115] - -LaTeX Warning: Reference `IKM-EQU-8c' on page 116 undefined on input line 279. - - -LaTeX Warning: Reference `IKM-EQU-5b' on page 116 undefined on input line 290. - - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy -stem.tex - -LaTeX Warning: Reference `FAULTSYSTEM2D' on page 116 undefined on input line 39 -. - -[116 ]g++ -o debian/tmp3/posix/dudley/src/dudleycpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/dudleycpp.cpp - - -LaTeX Warning: Reference `FAULTSYSTEM2D' on page 117 undefined on input line 12 -0. - - -LaTeX Warning: Reference `eq:2D line 1' on page 117 undefined on input line 144 -. - -[117] - -LaTeX Warning: Reference `eq:2D line 3' on page 118 undefined on input line 169 -. - -[118] - -LaTeX Warning: Reference `eq:2D line 3' on page 119 undefined on input line 307 -. - +> +Chapter 3. +) [57] [9]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.tex [10] +Chapter 4. +) [11] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.tex [58] [12] +Chapter 5. +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [59 [13]] [60] -LaTeX Warning: Reference `eq:2D line 4d' on page 119 undefined on input line 30 -7. +LaTeX Warning: Reference `fig:pycad rec mesh' on page 37 undefined on input lin +e 187. -[119] -LaTeX Warning: Reference `eq:2D line 3' on page 120 undefined on input line 325 +LaTeX Warning: Reference `fig:pycad rec' on page 37 undefined on input line 191 . - -LaTeX Warning: Reference `eq:2D line 4d' on page 120 undefined on input line 32 -5. +[37] [38 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.194 \clearpage + patch level 1 L3 programming layer <2023-01-16> +Overfull \hbox (19.96072pt too wide) in paragraph at lines 278--279 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[16]] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in version.tex -Chapter 7. - -LaTeX Warning: Reference `sec:dudley' on page 121 undefined on input line 29. - - -LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 58. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es +ysdoc.cls +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2022/07/02 v1.4n Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) Excluding 'comment' comment. +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[64 +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty] [17 +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)]) +Package geometry Warning: Over-specification in `h'-direction. + `width' (478.00812pt) is ignored. +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty +Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 +\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st +ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 +and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . +[65 +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg [18))] +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty [66] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [19 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty] [67 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg]) +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) [68 [20] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty] +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty) [69 +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty [21))]] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.tex) [22] +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) +Appendix A. +) [23] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.tex [24]) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +Appendix B. +(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)> [25] [70]]) +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty [26]) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.styInstall file: "escriptcore/src/NCHelper.h" as "debian/stage3/include/escript/NCHelper.h" -LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 65. +Underfull \vbox (badness 10000) has occurred while \output is active [27]Install file: "escriptcore/src/SubWorld.h" as "debian/stage3/include/escript/SubWorld.h" +) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty +[28] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/inst +all.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/intr +o.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/flat +pak.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cond +a.aux)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/dock +er.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/sour +ce.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/cxx1 +1.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/install/tril +inos.aux)) +LaTeX Warning: There were multiply-defined labels. -LaTeX Warning: Citation `Zienc' on page 121 undefined on input line 74. +Package rerunfilecheck Warning: File `install.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + ) +(see the transcript file for additional information) {/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8 +r.enc}< +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb> + +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty)Install file: "dudley/src/Assemble.h" as "debian/stage3/include/dudley/Assemble.h" +< -LaTeX Warning: Citation `NumHand' on page 121 undefined on input line 74. +LaTeX Warning: Reference `eqn:Tform nabla' on page 39 undefined on input line 2 +00. -LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 89. +Underfull \hbox (badness 10000) in paragraph at lines 197--202 +LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 205. -LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 98. +LaTeX Warning: Reference `eqn:hdgenf2' on page 39 undefined on input line 206. -LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 109 -. +LaTeX Warning: Reference `Sec:1DHDv0' on page 39 undefined on input line 213. -[121] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.cls -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) -LaTeX Warning: Reference `FINLEY FIG 01' on page 122 undefined on input line 13 -6. +LaTeX Warning: Reference `eq:hom flux' on page 39 undefined on input line 224. -LaTeX Warning: Reference `FINLEY TAB 1' on page 122 undefined on input line 152 -. +LaTeX Warning: Reference `NEUMAN 2' on page 39 undefined on input line 255. -LaTeX Warning: Reference `FINLEY.FIG:1' on page 122 undefined on input line 154 -. +LaTeX Warning: Reference `NEUMAN 2b' on page 39 undefined on input line 258. -LaTeX Warning: Reference `FINLEY.FIG:2' on page 122 undefined on input line 154 +LaTeX Warning: Reference `eq:inhom flux' on page 39 undefined on input line 258 . -LaTeX Warning: Reference `FINLEY.FIG:4' on page 122 undefined on input line 154 +LaTeX Warning: Reference `Sec:2DHD plot' on page 39 undefined on input line 266 . -Underfull \vbox (badness 1226) has occurred while \output is active [122 ] -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty [123 ] [124] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye -lements.tex -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty))) [125] - -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. - -) [126]g++ -o debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_AverageElementData.cpp - (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) - -LaTeX Warning: Reference `FINLEY MACRO TRI' on page 127 undefined on input line - 328. +LaTeX Warning: Reference `fig:steady state heat' on page 39 undefined on input +line 269. +[39/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb] [40 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.3}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.276 \clearpage + Install file: "escriptcore/src/DataFactory.h" as "debian/stage3/include/escript/DataFactory.h" +Install file: "dudley/src/IndexList.h" as "debian/stage3/include/dudley/IndexList.h" +) [71 +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty] +Output written on install.pdf (28 pages, 179989 bytes). +Transcript written on install.log. -LaTeX Warning: Reference `FINLEY MACRO REC' on page 127 undefined on input line - 328. +LaTeX Warning: Citation `lazyauspdc' on page 72 undefined on input line 2248. -LaTeX Warning: Reference `STOKES PROBLEM' on page 127 undefined on input line 3 -42. +) [72]) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.tex) +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.styInstall file: "escriptcore/src/AbstractReducer.h" as "debian/stage3/include/escript/AbstractReducer.h" +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +Chapter 4. -LaTeX Warning: Reference `FINLEY MESHES' on page 127 undefined on input line 34 -3. +LaTeX Warning: Reference `LINEARPDE.SINGLE.3' on page 73 undefined on input lin +e 59. -LaTeX Warning: Reference `TRILINOS' on page 127 undefined on input line 346. +LaTeX Warning: Reference `LINEARPDE.SINGLE.1' on page 73 undefined on input lin +e 60. -LaTeX Warning: Reference `TAB FINLEY SOLVER OPTIONS 1' on page 127 undefined on - input line 347. +LaTeX Warning: Reference `LINEARPDE.SINGLE.2' on page 73 undefined on input lin +e 60. +[73]>] +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple05.tex))) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -Underfull \hbox (badness 1910) in paragraph at lines 383--383 -[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 -PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in +LaTeX Warning: Reference `LINEARPDE.SINGLE.4' on page 74 undefined on input lin +e 132. -Underfull \vbox (badness 1337) has occurred while \output is active [127 -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty ]) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 444. +LaTeX Warning: Reference `CHAP: Tutorial' on page 74 undefined on input line 14 +6. +[74]Install file: "paso/src/Functions.h" as "debian/stage3/include/paso/Functions.h" +)Install file: "paso/src/MUMPS.h" as "debian/stage3/include/paso/MUMPS.h" +Install file: "paso/src/Preconditioner.h" as "debian/stage3/include/paso/Preconditioner.h" +Install file: "paso/src/MKL.h" as "debian/stage3/include/paso/MKL.h" +Install file: "paso/src/UMFPACK.h" as "debian/stage3/include/paso/UMFPACK.h" +Install file: "paso/src/performance.h" as "debian/stage3/include/paso/performance.h" -LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 456. +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +Underfull \hbox (badness 10000) in paragraph at lines 18--25 -[128 -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)]) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) [129] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -tex [130] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.styg++ -o debian/tmp3/posix/dudley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_getNormal.cpp -) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -Chapter 8. -LaTeX Warning: Reference `fig:ripleyrect' on page 131 undefined on input line 9 -2. +LaTeX Warning: Reference `example4' on page 41 undefined on input line 26. -LaTeX Warning: Reference `sec:ripleyfuncs' on page 131 undefined on input line -96. +LaTeX Warning: Reference `fig:anticlinehrmodel' on page 41 undefined on input l +ine 28. -[131 -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty [132) ]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Single_2D.cpp -) +[41 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.74 l30= + Line(p3, p0) ] -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)) -Chapter 9. +Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 +\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- +di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt +ions +[75] -LaTeX Warning: Reference `SPECKLEY:FIG:MESHES' on page 135 undefined on input l -ine 56. +LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin +e 251. -[135)] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)) [136 -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t -ex -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.defInstall file: "paso/src/Functions.h" as "debian/stage3/include/paso/Functions.h" -Install file: "paso/src/MKL.h" as "debian/stage3/include/paso/MKL.h" -Chapter 10. +LaTeX Warning: Reference `SEC Solver Options' on page 76 undefined on input lin +e 256. -LaTeX Warning: Reference `sec:weipafuncs' on page 137 undefined on input line 3 -2. -[137]Install file: "paso/src/MUMPS.h" as "debian/stage3/include/paso/MUMPS.h" -Install file: "paso/src/Preconditioner.h" as "debian/stage3/include/paso/Preconditioner.h" -Install file: "paso/src/UMFPACK.h" as "debian/stage3/include/paso/UMFPACK.h" -Install file: "paso/src/performance.h" as "debian/stage3/include/paso/performance.h" -) +LaTeX Warning: Reference `LINEARPDE.SYSTEM.5' on page 76 undefined on input lin +e 290. -LaTeX Warning: Citation `GOCAD' on page 138 undefined on input line 136. -[138 -Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 -\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for - the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th -e [] - -LaTeX Warning: Reference `fig:anticlinetemp' on page 42 undefined on input line - 127. +LaTeX Warning: Reference `LINEARPDE.SINGLE.5' on page 76 undefined on input lin +e 290. -[42]] [43 +[76]) [77] (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.5}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.134 \clearpage - ))] -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty -Chapter 11. - -LaTeX Warning: Citation `TrilinosWeb' on page 141 undefined on input line 18. - - -LaTeX Warning: Reference `CONST1a' on page 141 undefined on input line 26. +LaTeX Warning: Reference `PROJ.1' on page 79 undefined on input line 474. -LaTeX Warning: Reference `BC2' on page 141 undefined on input line 26. +LaTeX Warning: Reference `SEC Solver Options' on page 79 undefined on input lin +e 483. -LaTeX Warning: Reference `simplemesh' on page 141 undefined on input line 33. +[79] +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty -[141)] -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.styg++ -o debian/tmp3/posix/dudley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/DomainFactory.cpp -) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx) +LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 530. -LaTeX Warning: Reference `basic' on page 142 undefined on input line 84. +LaTeX Warning: Citation `Trilinos' on page 80 undefined on input line 581. -LaTeX Warning: Reference `basic' on page 142 undefined on input line 114. +[80] +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE.cpp -[142]) +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty [81)] +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) [82 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) LaTeX Warning: \include should only be used after \begin{document} on input lin e 18. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el -ist.tex -Underfull \hbox (badness 10000) in paragraph at lines 137--142 +ist.tex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +)) +LaTeX Warning: Citation `MKL' on page 83 undefined on input line 914. -LaTeX Warning: Reference `figs:dps' on page 44 undefined on input line 179. -[44 (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty] -Package `listing', V1.2, <1999/05/25> -)) [45 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.6}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.199 \clearpage - ) +gularization.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma pping.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux ]] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.tex +tro.tex [87 ]g++ -o debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_CopyNodalData.cpp +g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_Single_3D.cpp +>] [13 -LaTeX Warning: Citation `Sympy' on page 151 undefined on input line 20. +LaTeX Warning: Reference `FIG LUMPING SUPG INC A' on page 88 undefined on input + line 170. -Underfull \vbox (badness 10000) has occurred while \output is active [151]) +LaTeX Warning: Reference `FIG LUMPING SUPG INC B' on page 88 undefined on input + line 170. -LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 72. +LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 +0. -LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 74. +LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 +0. +LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 +7. -LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 75. +LaTeX Warning: Reference `LUMPING SUPG 1' on page 88 undefined on input line 18 +7. -LaTeX Warning: Reference `SEC LinearPDE' on page 152 undefined on input line 80 -. +LaTeX Warning: Reference `FIG LUMPING SUPG A' on page 88 undefined on input lin +e 191. -LaTeX Warning: Reference `symbolic eq2' on page 152 undefined on input line 87. +LaTeX Warning: Reference `FIG LUMPING SUPG Ab' on page 88 undefined on input li +ne 197. -[152]>] [12 ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.291 \clearpage - >] [13 ] +[88] ] @@ -8486,9 +7787,7 @@ LaTeX Warning: Citation `Telford1990a' on page 16 undefined on input line 290. -[16]> -] [155]) [156] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.tex -Chapter 13. -[157]> +[17] [18]> +vDepthMu100.png (PNG copy)> ] [22 ])) [89 ]) [23] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.tex [24]> +Chapter 2. -LaTeX Warning: Reference `fig:hr002qumodel' on page 48 undefined on input line -297. +Underfull \hbox (badness 10000) in paragraph at lines 7--7 +[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ +OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file +[25] ] [90 ] +LaTeX Warning: Citation `IGRF' on page 27 undefined on input line 96. -Underfull \hbox (badness 10000) in paragraph at lines 294--299 -[48 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.305 \clearpage - ] [22 [165]]) [23] [166 +) [27] [28 ] [29 ] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.tex [24]] [167] +okJointDUMMY.tex [30] +Chapter 3. +) [31] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.tex [32]>] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +ex +Chapter 4. -LaTeX Warning: Reference `sec:interpolation' on page 168 undefined on input lin -e 228. +LaTeX Warning: Citation `LOKE2014' on page 33 undefined on input line 30. -[168] +[33] +Chapter 5. -LaTeX Warning: Reference `sec:lazy' on page 169 undefined on input line 284. +LaTeX Warning: Citation `GMSH' on page 91 undefined on input line 24. +[91] [34 ]) -Chapter 5. +LaTeX Warning: Reference `ESCRIPT CHAP' on page 92 undefined on input line 125. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple07.tex [173]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex -[174] -LaTeX Warning: Reference `eqn:laplacian' on page 49 undefined on input line 41. +LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 133. -LaTeX Warning: Reference `eqn:grad' on page 49 undefined on input line 72. +LaTeX Warning: Reference `fig:PYCAD 0' on page 92 undefined on input line 140. -LaTeX Warning: Reference `eqn:gradrank1' on page 49 undefined on input line 79. +LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 145. -[49 -Appendix E. -))] [175] [176] -No file user.ind. -No file user.bbl. +LaTeX Warning: Reference `chap:finley' on page 92 undefined on input line 145. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au -x -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.aux> ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a -ux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a -ux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli -c.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi -x.aux)) -LaTeX Warning: There were undefined references. +LaTeX Warning: Citation `GMSH' on page 92 undefined on input line 154. -LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. +LaTeX Warning: Reference `fig:PYCAD 1' on page 92 undefined on input line 158. +[92] [93 ]>]) [35] [36] [37] [38] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.tex +Chapter 5. -Package rerunfilecheck Warning: File `user.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. +LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54. - ) -(see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc} + +LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 219. -LaTeX Warning: Reference `eqn:centdiff' on page 50 undefined on input line 162. +LaTeX Warning: Reference `fig:PYCAD 2' on page 94 undefined on input line 251. +[94] ] -LaTeX Warning: Reference `eqn:acswave' on page 50 undefined on input line 163. +LaTeX Warning: Citation `Nocedal1980' on page 41 undefined on input line 71. -[50]>] [28 >] ]> -Chapter 3. -)< -/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>ile NodeFile.cpp... +[42])) [43] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.tex [95 [44 ] +Chapter 6. + +LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line +48. + +[45] [46 ] ] [47ile NodeFile.cpp... Parsing code for file NodeFile.cpp... Generating code for file NodeFile.h... Generating code for file NodeFile.h... @@ -8836,232 +8059,211 @@ Parsing code for file NonReducedVariable.cpp... Generating code for file NonReducedVariable.h... Parsing code for file NullDomain.cpp... -Generating code for +Generating code for [97 ] -Underfull \hbox (badness 10000) in paragraph at lines 279--280 +LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 698. -[52 -pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.280 - ]done (7112 comparisons). -Generating output file user.ind....done (353 lines written, 0 warnings). -Output written in user.ind. -Transcript written in user.ilg. -cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex +LaTeX Warning: Citation `IDEAS' on page 101 undefined on input line 702. -LaTeX Warning: Reference `eqn:waveu' on page 53 undefined on input line 284. +LaTeX Warning: Citation `VRML' on page 101 undefined on input line 706. -LaTeX Warning: Reference `sec:nsstab' on page 53 undefined on input line 326. +LaTeX Warning: Citation `STL' on page 101 undefined on input line 710. -LaTeX Warning: Reference `eqn:samptheorem' on page 53 undefined on input line 3 -33. +LaTeX Warning: Citation `NASTRAN' on page 101 undefined on input line 714. -LaTeX Warning: Reference `fig:ex07sampth' on page 53 undefined on input line 33 -5. -[53])>]) [35] [54 -pdfTeX warning (ext4): destination with the same identifier (name{figure.5.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.122 \chapter - {Seismic Wave Propagation} ] [36] [37] [38] +LaTeX Warning: Citation `MEDIT' on page 101 undefined on input line 718. + + +LaTeX Warning: Citation `CGNS' on page 101 undefined on input line 722. + + +LaTeX Warning: Citation `PLOT3D' on page 101 undefined on input line 726. + + +LaTeX Warning: Citation `DIFFPACK' on page 101 undefined on input line 730. + + +LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 734. + + +LaTeX Warning: Citation `TETGEN' on page 101 undefined on input line 734. + + +LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 738. + + +LaTeX Warning: Citation `NETGEN' on page 101 undefined on input line 742. + +[101] [102 +Underfull \hbox (badness 10000) in paragraph at lines 261--261 +[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t +ion can be sup-ported by build-ing sub-classes of the +[48]]) [103] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +tex [104] Chapter 6. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple08.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.texThis is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) - restricted \write18 enabled. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess +olver.tex [49]) [50 -Chapter 5. +LaTeX Warning: Reference `Stokes 1' on page 105 undefined on input line 50. -LaTeX Warning: Citation `ESCRIPT' on page 39 undefined on input line 54. -[39] +LaTeX Warning: Reference `Stokes 2' on page 105 undefined on input line 50. -LaTeX Warning: Citation `ESCRIPT' on page 40 undefined on input line 79. +LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 105 undefined on input line +69. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr -ivers.tex -Underfull \hbox (badness 10000) in paragraph at lines 18--24 +LaTeX Warning: Citation `MBENZI2005' on page 105 undefined on input line 69. -LaTeX Warning: Reference `eqn:wav' on page 55 undefined on input line 40. +LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 73. -LaTeX Warning: Reference `eqn:sigtrace' on page 55 undefined on input line 59. +LaTeX Warning: Reference `STOKES' on page 105 undefined on input line 88. -LaTeX Warning: Reference `eqn:sigtrans' on page 55 undefined on input line 62. +[105] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.tex] -[55 [40 ] +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 95. -LaTeX Warning: Citation `Nocedal1980' on page 41 undefined on input line 71. -[41] +LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li +ne 98. -LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 124. +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 98. -LaTeX Warning: Citation `Nocedal1980' on page 42 undefined on input line 182. -[42 +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 113. -LaTeX Warning: Reference `tab:wpcores' on page 56 undefined on input line 116. +LaTeX Warning: Reference `STOKES ITER STEP 1' on page 106 undefined on input li +ne 117. -Underfull \hbox (badness 10000) in paragraph at lines 139--145 -[56 -pdfTeX warning (ext4): destination with the same identifier (name{table.6.1}) h -as been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.153 # - ###########################################FIRST TIME STEPS AND SOURCE]])) [43] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.tex [44] -Chapter 6. +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 118. -LaTeX Warning: Citation `Featherstone2008a' on page 45 undefined on input line -48. -[45] -[57] [46 ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.214 \clearpage - < -/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu -res/ex08pw650.png (PNG copy)> ]>] [47 ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.273 t= - t+h; n=n+1 patch level 1 -L3 programming layer <2023-01-16> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te -x -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc -.cls -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty>] -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 139. -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -Underfull \hbox (badness 10000) in paragraph at lines 261--261 -[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t -ion can be sup-ported by build-ing sub-classes of the -[48 -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty]>] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) [49] -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) [50)] -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.tex) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 143. + + +LaTeX Warning: Citation `ELMAN' on page 106 undefined on input line 148. + + +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 160. + + +LaTeX Warning: Reference `STOKES ITER STEP 2' on page 106 undefined on input li +ne 169. + +[106] Chapter 7. LaTeX Warning: Citation `Nocedal1980' on page 51 undefined on input line 40. [51] -Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin -e 293. +LaTeX Warning: Reference `STOKES total V1' on page 107 undefined on input line +187. + + +LaTeX Warning: Reference `STOKES total P2' on page 107 undefined on input line +187. -[60 -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)] -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) [52 -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty] -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty + +LaTeX Warning: Reference `STOKES total V2' on page 107 undefined on input line +187. + + +LaTeX Warning: Reference `STOKES STOPPING CRITERIA' on page 107 undefined on in +put line 221. + + +LaTeX Warning: Reference `STOKES TOL1' on page 107 undefined on input line 256. + + + +LaTeX Warning: Reference `STOKES TOL2' on page 107 undefined on input line 257. + + + +LaTeX Warning: Reference `STOKES EST 1' on page 107 undefined on input line 264 +. + + +LaTeX Warning: Reference `STOKES EST 2' on page 107 undefined on input line 264 +. + +[107] [52] LaTeX Warning: Citation `Nocedal1980' on page 53 undefined on input line 215. (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty -LaTeX Warning: Reference `fig:abconds' on page 61 undefined on input line 347. +LaTeX Warning: Reference `STOKES TOL1' on page 108 undefined on input line 305. -[61 -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.392 \clearpage - ] [62 -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.4}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.392 \clearpage - - ] [57 -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty] -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) [58] -(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) [59 -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)]) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty [60] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.tex) -Underfull \hbox (badness 10000) in paragraph at lines 395--399 +[56]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl +ux.tex +LaTeX Warning: Reference `DARCY PROBLEM' on page 110 undefined on input line 48 +. -LaTeX Warning: Reference `fig:ex08cres' on page 63 undefined on input line 430. +LaTeX Warning: Reference `DARCY PROBLEM' on page 110 undefined on input line 49 +. -) [63 -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.5}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.125 \chapter - {3D Seismic Wave Propagation} ] -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) [64 -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.6}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.125 \chapter - {3D Seismic Wave Propagation} ] -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +[110 [57]] [58] + +LaTeX Warning: Reference `DARCY PROBLEM' on page 111 undefined on input line 51 +. + + +LaTeX Warning: Reference `DARCY PROBLEM SIMPLE FLUX' on page 111 undefined on i +nput line 73. + + +LaTeX Warning: Reference `DARCY PROBLEM POST FLUX A' on page 111 undefined on i +nput line 105. + + +LaTeX Warning: Reference `SEC DARCY SIMPLE' on page 111 undefined on input line + 109. + + +LaTeX Warning: Reference `SEC DARCY POST' on page 111 undefined on input line 1 +13. + + +LaTeX Warning: Reference `SEC DARCY POST' on page 111 undefined on input line 1 +17. + + +LaTeX Warning: Reference `DARCY PROBLEM' on page 111 undefined on input line 12 +6. + +[111] [59]) [60] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da +taSources.tex [112 ]) Chapter 9. -[61 -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) ] -Chapter 7. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple09.tex -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) [62 -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty] -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty) +LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 28. + + +LaTeX Warning: Citation `Muhlhaus2005' on page 113 undefined on input line 55. + + +LaTeX Warning: Reference `IKM-EQU-5' on page 113 undefined on input line 57. + + +LaTeX Warning: Reference `IKM-EQU-4' on page 113 undefined on input line 57. + + +LaTeX Warning: Reference `IKM-EQU-2' on page 113 undefined on input line 61. + +[113] [62] + +LaTeX Warning: Reference `IKM-EQU-3' on page 114 undefined on input line 91. + + +LaTeX Warning: Reference `IKM-EQU-8c' on page 114 undefined on input line 120. + + +LaTeX Warning: Reference `IKM-EQU-2b' on page 114 undefined on input line 121. + + +LaTeX Warning: Reference `IKM-EQU-10' on page 114 undefined on input line 126. + + +LaTeX Warning: Reference `IKM-EQU-1' on page 114 undefined on input line 126. + + +LaTeX Warning: Reference `IKM-EQU-2' on page 114 undefined on input line 132. + + +LaTeX Warning: Reference `STOKES SOLVE' on page 114 undefined on input line 133 +. + + +LaTeX Warning: Reference `IKM-EQU-44' on page 114 undefined on input line 157. + + +LaTeX Warning: Reference `IKM-EQU-45' on page 114 undefined on input line 158. + +[114 LaTeX Warning: Citation `ESCRIPT' on page 63 undefined on input line 158. -[63)]) +[63]] + +LaTeX Warning: Citation `LBB' on page 115 undefined on input line 206. + +[115 LaTeX Warning: Citation `ERMAPPER' on page 64 undefined on input line 277. -[64 -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def]) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty -Underfull \hbox (badness 10000) in paragraph at lines 17--21 +[64]] + +LaTeX Warning: Reference `IKM-EQU-8c' on page 116 undefined on input line 279. + + +LaTeX Warning: Reference `IKM-EQU-5b' on page 116 undefined on input line 290. + -[65) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy +stem.tex + +LaTeX Warning: Reference `FAULTSYSTEM2D' on page 116 undefined on input line 39 +. + +[116 LaTeX Warning: Citation `NETCDF' on page 65 undefined on input line 318. LaTeX Warning: Citation `matplotlib' on page 65 undefined on input line 328. -[65]] -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def [66] +[65]]) + +LaTeX Warning: Reference `FAULTSYSTEM2D' on page 117 undefined on input line 12 +0. + + +LaTeX Warning: Reference `eq:2D line 1' on page 117 undefined on input line 144 +. + +[117 [66]] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re gularization.tex + +LaTeX Warning: Reference `eq:2D line 3' on page 118 undefined on input line 169 +. + +[118] Chapter 10. LaTeX Warning: Citation `GALLARDO2005a' on page 67 undefined on input line 28. -[67]) [68]) [69] +[67] [68 + +LaTeX Warning: Reference `eq:2D line 3' on page 119 undefined on input line 307 +. + + +LaTeX Warning: Reference `eq:2D line 4d' on page 119 undefined on input line 30 +7. + +[119]]) [69] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma pping.tex [70] -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty + +LaTeX Warning: Reference `eq:2D line 3' on page 120 undefined on input line 325 +. + + +LaTeX Warning: Reference `eq:2D line 4d' on page 120 undefined on input line 32 +5. + + +LaTeX Warning: Reference `Slip CHAP' on page 120 undefined on input line 383. + +)) [120] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +tex Chapter 11. -[71]) -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty [72]) +[71]) [72] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.tex) +rwardModels.tex +Chapter 7. + +LaTeX Warning: Reference `sec:dudley' on page 121 undefined on input line 29. + + +LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 58. + + + +LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 65. + + + +LaTeX Warning: Citation `Zienc' on page 121 undefined on input line 74. + + +LaTeX Warning: Citation `NumHand' on page 121 undefined on input line 74. + + +LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 89. + + + +LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 98. + + + +LaTeX Warning: Reference `FINLEY FIG 0' on page 121 undefined on input line 109 +. + +[121] Chapter 12. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardGravity.tex [73] [74]) +rwardGravity.tex [73>] + +LaTeX Warning: Reference `FINLEY FIG 01' on page 122 undefined on input line 13 +6. + + +LaTeX Warning: Reference `FINLEY TAB 1' on page 122 undefined on input line 152 +. + + +LaTeX Warning: Reference `FINLEY.FIG:1' on page 122 undefined on input line 154 +. + + +LaTeX Warning: Reference `FINLEY.FIG:2' on page 122 undefined on input line 154 +. + + +LaTeX Warning: Reference `FINLEY.FIG:4' on page 122 undefined on input line 154 +. + + +Underfull \vbox (badness 1226) has occurred while \output is active [122] ] [123 ] [124 [74]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye +lements.tex) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardMagnetic.tex -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty) LaTeX Warning: Citation `IGRF' on page 75 undefined on input line 34. LaTeX Warning: Citation `AGRF' on page 75 undefined on input line 35. -[75] [66 [76]]) [77 -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def]) +[75)] [125] [126] [76] [77]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardMagneticIntensity.tex -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) [78]) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty +Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 +\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for + the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th +e [] + +LaTeX Warning: Reference `fig:anticlinetemp' on page 42 undefined on input line + 127. + +[42] [78 [43] +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.5}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.134 \clearpage + ]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardSelfMagnetic.tex [67 [79]] [68 +rwardSelfMagnetic.tex [79] + +LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 444. + + +LaTeX Warning: Citation `GMSH' on page 128 undefined on input line 456. + +[128] LaTeX Warning: Citation `Lelievre2006a' on page 80 undefined on input line 21. -[80] ] -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty [81]))) +[80)] [129] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +tex [130] [81]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rward2DMTTEMode.tex) +rward2DMTTEMode.tex> LaTeX Warning: Citation `chave2012magnetotelluric' on page 82 undefined on inpu t line 18. -[82 -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty]) [83 -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty])) +[82]] +Chapter 8. + +LaTeX Warning: Reference `fig:ripleyrect' on page 131 undefined on input line 9 +2. + + +LaTeX Warning: Reference `sec:ripleyfuncs' on page 131 undefined on input line +96. + +[131 [83]]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo rwardDCRES.tex LaTeX Warning: Citation `rucker2006three' on page 84 undefined on input line 32 . -[84 -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)]) [69 +[84] [132 ]] + +LaTeX Warning: Citation `LOKE2014' on page 86 undefined on input line 124. + +)) +Underfull \hbox (badness 10000) in paragraph at lines 137--142 + + +LaTeX Warning: Reference `figs:dps' on page 44 undefined on input line 179. + +[44 + +LaTeX Warning: Reference `fig:ripleyrect' on page 133 undefined on input line 1 +57. + +)] [86] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.ind [133 [45] +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.6}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... -l.186 \clearpage +l.199 \clearpage < +Chapter 9. + +LaTeX Warning: Reference `SPECKLEY:FIG:MESHES' on page 135 undefined on input l +ine 56. + +[135/usr/share/texlive/tex +mf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb>>) (PNG copy)> ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t +ex + +Chapter 10. + +LaTeX Warning: Reference `sec:weipafuncs' on page 137 undefined on input line 3 +2. + +[137] +Output written on inversion.pdf (90 pages, 5297667 bytes). +Transcript written on inversion.log. +cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex -LaTeX Warning: Citation `LOKE2014' on page 86 undefined on input line 124. -) (PNG copy))>] [86 file NullDomain.h... +LaTeX Warning: Citation `GOCAD' on page 138 undefined on input line 136. + +[138]This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. + + +LaTeX Warning: Citation `VisIt' on page 139 undefined on input line 174. + + +LaTeX Warning: Reference `ELASTIC CHAP' on page 139 undefined on input line 182 +. + +[139]> patch level 1 +L3 programming layer <2023-01-16> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es +ysdoc.cls +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2022/07/02 v1.4n Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)> +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty ])) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty [145 +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)] +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty +Underfull \hbox (badness 10000) in paragraph at lines 266--271 + + +Overfull \hbox (0.87425pt too wide) in paragraph at lines 278--279 +[]\OT1/pcr/m/n/10 "Elasticity-2D" and "Elasticity-3D"\OT1/ptm/m/n/10 : us-ing s +moothed ag-gre-ga-tion, Cheby-shev smoother and +[146] +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty + +LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line +204. + + +Underfull \hbox (badness 10000) in paragraph at lines 202--209 + + +LaTeX Warning: Reference `Sec:2DHD plot' on page 46 undefined on input line 210 +. + + +Overfull \hbox (5.0533pt too wide) in paragraph at lines 210--216 +[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion []. To sho +w sub-domains, we need to go back to [] + +LaTeX Warning: Reference `fig:hr001qumodel' on page 46 undefined on input line +284. + +[46)] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def [47 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.7}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.291 \clearpage + +)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd)) +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty **************************************** * Local config file subfigure.cfg used * **************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) [89]) [90] +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de +fs.tex) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve +rinfo.tex) + +LaTeX Warning: Reference `simplebob' on page 149 undefined on input line 422. + + +LaTeX Warning: Reference `complicatedbob' on page 149 undefined on input line 4 +36. + + +Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] + +Overfull \hbox (3.76056pt too wide) in paragraph at lines 464--465 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][] + +Overfull \hbox (63.16116pt too wide) in paragraph at lines 466--467 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[149] +Writing index file inversion.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.aux +version.aux) [150 (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in tro.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.aux) +okGravity.aux)] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.aux) +okMagnetic.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.tex) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co okJointDUMMY.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co @@ -9361,7 +9099,6 @@ troPart2.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do mains.aux) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi nimization.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co @@ -9373,86 +9110,319 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma pping.aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) +rwardModels.aux))>] -LaTeX Warning: There were undefined references. +LaTeX Warning: Reference `fig:hr002qumodel' on page 48 undefined on input line +297. -LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. +Underfull \hbox (badness 10000) in paragraph at lines 294--299 +[48 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.305 \clearpage + -LaTeX Warning: \include should only be used after \begin{document} on input lin -e 183. +Underfull \vbox (badness 10000) has occurred while \output is active [151 +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +[Loading MPS to PDF converter (version 2006.09.02).] +)] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [1{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do +cguide.tex [2]) [3 +LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 72. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t -ex -Package `listing', V1.2, <1999/05/25> -)) - -Underfull \hbox (badness 10000) in paragraph at lines 202--209 -Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 74. + + + +LaTeX Warning: Reference `symbolic eq1' on page 152 undefined on input line 75. + + + +LaTeX Warning: Reference `SEC LinearPDE' on page 152 undefined on input line 80 +. + + +LaTeX Warning: Reference `symbolic eq2' on page 152 undefined on input line 87. + + +[152]] [4] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.toc [5]) [6] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.tex) [7] [8] [9] [10] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.tex + +LaTeX Warning: Reference `isovsaniso' on page 153 undefined on input line 185. + + +LaTeX Warning: `!h' float specifier changed to `!ht'. + +[153] [154 +Chapter 1. + +Underfull \hbox (badness 10000) in paragraph at lines 54--54 +[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ +\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file + +Underfull \hbox (badness 10000) in paragraph at lines 65--65 +[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion + ob-tained by in-ver-sion of file +[11 ])> +] +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + + +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + +[52 +pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.280 + [156] [13 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.tex +[14] [15 > ] +Chapter 13. +[157]] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [16] + +LaTeX Warning: Reference `eqn:waveu' on page 53 undefined on input line 284. + + +LaTeX Warning: Reference `sec:nsstab' on page 53 undefined on input line 326. + + +LaTeX Warning: Reference `eqn:samptheorem' on page 53 undefined on input line 3 +33. + + +LaTeX Warning: Reference `fig:ex07sampth' on page 53 undefined on input line 33 +5. + +[53]) [54 +pdfTeX warning (ext4): destination with the same identifier (name{figure.5.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.122 \chapter + {Seismic Wave Propagation} ] [17] +Chapter 6. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple08.tex +[18] + +LaTeX Warning: Reference `splitworldClass' on page 158 undefined on input line +82. + +[158 +Underfull \hbox (badness 10000) in paragraph at lines 18--24 + + +LaTeX Warning: Reference `eqn:wav' on page 55 undefined on input line 40. + + +LaTeX Warning: Reference `eqn:sigtrace' on page 55 undefined on input line 59. + + +LaTeX Warning: Reference `eqn:sigtrans' on page 55 undefined on input line 62. + +[55]] + +LaTeX Warning: Reference `tab:wpcores' on page 56 undefined on input line 116. + + +Underfull \hbox (badness 10000) in paragraph at lines 139--145 + +[56 [159 +pdfTeX warning (ext4): destination with the same identifier (name{table.6.1}) h +as been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.153 # + ###########################################FIRST TIME STEPS AND SOURCE]]) [19] [160 [20] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi +x.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/notatio +n.tex] [21 ] +Appendix A. ) -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo -.tex) -Output written on inversion.pdf (90 pages, 5297284 bytes). -Transcript written on inversion.log. - [70]cd debian/tmp3/posix/doc/inversion && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{inversion.tex} inversion.tex - [71 ] -Writing index file user.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) [72] -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/changes +.tex [161] +[22 ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.214 \clearpage + < +/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu +res/ex08pw650.png (PNG copy)> ] +Appendix B. +[163] [164] [165] +Underfull \hbox (badness 10000) in paragraph at lines 218--223 + + +LaTeX Warning: Reference `fig:tvsource' on page 59 undefined on input line 228. + + +[59 +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.273 t= + t+h; n=n+1 + +LaTeX Warning: Reference `sec:lazy' on page 169 undefined on input line 284. + + +LaTeX Warning: Reference `sec:savedatacsv' on page 169 undefined on input line +289. + +[169]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet +edevs.tex] [170]) [23 +Appendix C. +)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs +.tex +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.tex [171 [24]]> [172]] +Appendix D. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) +Chapter 2. + +Underfull \hbox (badness 10000) in paragraph at lines 7--7 +[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ +OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file +[25] [26 ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.392 \clearpage + ]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a ux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -aux) +aux) [62 (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -aux) +aux +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.4}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.392 \clearpage + + ] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. aux) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle @@ -9482,6 +9463,150 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi x.aux)) +LaTeX Warning: There were undefined references. + + +LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. + + +Package rerunfilecheck Warning: File `user.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + + ) +(see the transcript file for additional information){/usr/share/texlive/texmf-d +ist/fonts/enc/dvips/base/8r.enc}> ] +Underfull \hbox (badness 10000) in paragraph at lines 395--399 + + +LaTeX Warning: Reference `fig:ex08cres' on page 63 undefined on input line 430. + + +) [63 +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.5}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.125 \chapter + {3D Seismic Wave Propagation} ]> [64< +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.6}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.125 \chapter + {3D Seismic Wave Propagation} ]> +Chapter 7. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple09.tex< +/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>) [27<]/usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmr8a.pfb> +Underfull \hbox (badness 10000) in paragraph at lines 17--21 + +[65 [28] < /usr/share/texlive +/texmf-dist/fonts/type1/urw/times/utmri8a.pfb ] [29> ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okJointDUMMY.tex [30] +Chapter 3. +) [31] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.tex [32] +Output written on user.pdf (176 pages, 2623179 bytes). +Transcript written on user.log. + [66]cd debian/tmp3/posix/doc/user && bibtex user + [67] [68 ]This is BibTeX, Version 0.99d (TeX Live 2022/Debian) +The top-level auxiliary file: user.aux +The style file: plain.bst +Database file #1: esys.bib +cd debian/tmp3/posix/doc/user && makeindex user.idx + [69 +pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.186 \clearpage + ] +Chapter 4. +[33]This is makeindex, version 2.16 [TeX Live 2022] (kpathsea + Thai support). +Scanning input file user.idx....done (716 entries accepted, 12 rejected). +Sorting entries........done (7112 comparisons). +Generating output file user.ind....done (353 lines written, 0 warnings). +Output written in user.ind. +Transcript written in user.ilg. + +Underfull \hbox (badness 10000) in paragraph at lines 202--209 + + +Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +)cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex + [70] [71 ] [72] +Chapter 8. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple10.tex [34 ...shipout:D \box_use:N \l_shipout_box @@ -9546,35 +9652,26 @@ \__shipout_drop_firstpage_... l.177 \clearpage ] - -LaTeX Warning: Citation `Zienc' on page 12 undefined on input line 148. - - -LaTeX Warning: Citation `NumHand' on page 12 undefined on input line 148. - -[12] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) [13 ]> ]) [35> patch level 1 L3 programming layer <2023-01-16> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/es -ysdoc.cls +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te +x +Chapter 5. +[39 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc +.cls] Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) [14] -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Dr +ivers.tex) [40 ] (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) @@ -9582,50 +9679,9 @@ Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) [41] (/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty - -LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 312. - - -LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 317. - - -LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 317. - -[15] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) [16 -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) ] -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)) - -LaTeX Warning: Citation `matplotlib' on page 17 undefined on input line 408. - - -LaTeX Warning: Citation `mayavi' on page 17 undefined on input line 426. - - -LaTeX Warning: Citation `VisIt' on page 17 undefined on input line 426. - -[17 ])) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi -on.tex -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) [18 ] -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)> -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty [19)]] [77 +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty>] [77 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -9639,40 +9695,52 @@ l.177 \clearpage )] +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) [47 ]>]))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te -x) +Underfull \hbox (badness 10000) in paragraph at lines 261--261 +[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t +ion can be sup-ported by build-ing sub-classes of the +[48] (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty [23) ] -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def [24 ] [25> ]) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty Underfull \hbox (badness 10000) in paragraph at lines 180--184 @@ -9686,7 +9754,8 @@ LaTeX Warning: Reference `fig:ex10p' on page 78 undefined on input line 218. -[78))] [79 +[78] +(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) [79 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.5}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -9701,6 +9770,7 @@ ] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def [80 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.7}) has been already used, duplicate ignored @@ -9708,34 +9778,29 @@ \__shipout_drop_firstpage_... l.246 \clearpage ] -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def [26] -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty +/doc/cookbook/figures/ex10p_boundeff.pdf>] [49]) [50]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.tex +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +Chapter 7. +[51 +(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty]) Underfull \hbox (badness 10000) in paragraph at lines 275--281 -[81)))] -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) +[81)] +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty [52)]) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/psnfss/omsptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty [53] +(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) +[54 +(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +stFunctions.tex (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) [27)] -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) - -LaTeX Warning: \include should only be used after \begin{document} on input lin -e 18. - - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/el -ist.tex - -LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 346. - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty -Package `listing', V1.2, <1999/05/25> -)) (/usr/share/texlive/texmf-dist/tex/latex/program/program.sty +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) +Chapter 8. +[55) LaTeX Warning: Reference `fig:ex10mgeo' on page 82 undefined on input line 348. @@ -9744,18 +9809,9 @@ LaTeX Warning: Reference `fig:ex10mmsh' on page 82 undefined on input line 379. -[82 - -LaTeX Warning: Citation `GNUPLOT' on page 28 undefined on input line 359. - -[28 ]] -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [83 +[82]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de +fs.tex [83 (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty pdfTeX warning (ext4): destination with the same identifier (name{figure.8.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -9768,11 +9824,14 @@ \__shipout_drop_firstpage_... l.406 \clearpage -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/ueur.fd ] -) -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty +/doc/cookbook/figures/ex10m_geo.png (PNG copy)> ] + +**************************************** +* Local config file subfigure.cfg used * +**************************************** +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty [56 LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin e 427. @@ -9784,45 +9843,37 @@ LaTeX Warning: Reference `fig:ex10q boundeff' on page 84 undefined on input lin e 443. -[84 +[84] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg pdfTeX warning (ext4): destination with the same identifier (name{figure.8.10}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.449 \clearpage ]) - -LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 396. - - -LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 398. - -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/de -fs.tex [85 +/doc/cookbook/figures/ex10q_boundeff.pdf)>] [85 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx pdfTeX warning (ext4): destination with the same identifier (name{figure.8.11}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.449 \clearpage ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/ve -rinfo.tex) [86] [29 ] +/doc/cookbook/figures/ex10q_boundeff_zoom.pdf))>]) [86] +(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty [57)] Chapter 9. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.tex [30 -Writing index file inversion.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +mple11.tex + +LaTeX Warning: \include should only be used after \begin{document} on input lin +e 183. + + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t +ex (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +Package `listing', V1.2, <1999/05/25> +)) [58]) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line 24. @@ -9841,17 +9892,15 @@ Package natbib Warning: Citation `Honig2007' on page 87 undefined on input line 73. -)] -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +) +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty No file cookbook.bbl. Package natbib Warning: There were undefined citations. -[87 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.aux] [88 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.aux +[87))] [59 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo +.tex)] [88 pdfTeX warning (ext4): destination with the same identifier (name{figure.9.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -9860,9 +9909,7 @@ ] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.aux)) +kbook.aux)) [60] LaTeX Warning: There were undefined references. @@ -10020,118 +10067,139 @@ , replaced by a fixed one { -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.aux)/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.aux))< -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.aux)/usr/share/texlive/texmf- -dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux)< (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.aux)/usr/share/texlive/texmf-dist/fonts/ty -pe1/public/amsfonts/cm/cmmi6.pfb -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux)> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux<)/usr/share/texlive/texmf-dist/fonts/type1/pub -lic/amsfonts/cm/cmmi7.pfb><)/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c -m/cmr10.pfb> [31<]/usr/share/texlive/texmf-dist/fonts/type1/urw/c -ourier/ucrb8a.pfb)>< +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def/usr/share/texlive/texmf-dist/fonts/type1/public/ams +fonts/cm/cmmi8.pfb>< +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au +x +Chapter 9. +[61/us +r/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb>< >] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.aux)< +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.aux/usr/share/texlive/texmf-dist/fonts/typ +e1/public/amsfonts/cm/cmsy8.pfb)> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a +ux)< [62 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +aux/usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr8a +.pfb) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle +y.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a +ux)> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.aux<)/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.aux]>) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.aux)< +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi +x.aux/usr/s +hare/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb))> [63<]/usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri8a.pfb> *geometry* driver: auto-detecting *geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf -low.tex>< +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [64 [Loading MPS to PDF converter (version 2006.09.02).] -)/usr/s -hare/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> [32 >] +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty] (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd -Output written on cookbook.pdf (88 pages, 4401180 bytes). +Output written on cookbook.pdf (88 pages, 4401320 bytes). Transcript written on cookbook.log. -) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd)cd debian/tmp3/posix/doc/cookbook && bibtex cookbook - [1{/var/lib/texmf/fo -nts/map/pdftex/updmap/pdftex.map + [65]cd debian/tmp3/posix/doc/cookbook && bibtex cookbook -LaTeX Warning: Citation `LBB' on page 33 undefined on input line 106. - -[33}]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/do -cguide.tex [2]) [3] [4]This is BibTeX, Version 0.99d (TeX Live 2022/Debian) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd)) [66] [1 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re +gularization.tex{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig +hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fdThis is BibTeX, Version 0.99d (TeX Live 2022/Debian) The top-level auxiliary file: cookbook.aux The style file: plainnat.bst Database file #1: cookbook.bib +)cd debian/tmp3/posix/doc/cookbook && makeindex cookbook.idx -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.toccd debian/tmp3/posix/doc/cookbook && makeindex cookbook.idx - [5])This is makeindex, version 2.16 [TeX Live 2022] (kpathsea + Thai support). +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid +e.tex +Chapter 10. +[67 [2]]) [3]This is makeindex, (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fdversion 2.16 [TeX Live 2022] (kpathsea + Thai support). Scanning input file cookbook.idx....done (2 entries accepted, 0 rejected). Sorting entries....done (2 comparisons). Generating output file cookbook.ind....done (9 lines written, 0 warnings). Output written in cookbook.ind. Transcript written in cookbook.ilg. - [6] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.tex)cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex - [7] [8)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te -x [9] [10] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.tex [34]This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) +) [68 +[4]] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current +dev.texcd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex +) [69 [5]]) [6 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma +pping.tex] [70 +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to +c] [7] +Chapter 11. +[71]This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) restricted \write18 enabled. - [35 ] + [8]) [72] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardModels.tex [9] +Chapter 12. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardGravity.tex) [10] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.tex [73 Chapter 1. -Underfull \hbox (badness 10000) in paragraph at lines 54--54 -[]\OT1/ptm/m/n/10 Figure 1.1: Grav-ity Anomaly Data in $\OML/cmm/m/it/10 mgal$ -\OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst +ep.tex] [74] [11) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardMagnetic.tex ] [75] -Underfull \hbox (badness 10000) in paragraph at lines 65--65 -[]\OT1/ptm/m/n/10 Figure 1.2: 3-D con-tour plot of the den-sity dis-tri-bu-tion - ob-tained by in-ver-sion of file -[11] (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty -[36 ]) [12 ] [78]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardSelfMagnetic.tex [79] [80]entering extended mode LaTeX2e <2022-11-01> patch level 1 L3 programming layer <2023-01-16> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo @@ -10141,110 +10209,195 @@ Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo [81)])) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rward2DMTTEMode.tex +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) [82 +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty] [14] (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg))> -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty]) [13 ]) +) [83 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)] +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardDCRES.tex [84 +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) [85 +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty]) + +LaTeX Warning: Citation `matplotlib' on page 15 undefined on input line 312. + + +LaTeX Warning: Citation `mayavi' on page 15 undefined on input line 317. + + +LaTeX Warning: Citation `VisIt' on page 15 undefined on input line 317. + +[15) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)) [86 (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.ind)] (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def [87))])) [88 +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.bbl For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty -[14 -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))] [15 +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty ) ]) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty [16)] -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) [89]) [90) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +version.aux +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in +tro.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okGravity.aux) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okMagnetic.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okJointDUMMY.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +okDcRes.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In +troPart2.aux)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do +mains.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi +nimization.aux) [16 +(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co +stFunctions.aux )] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma +pping.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo +rwardModels.aux (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty -(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) [17 -(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)] -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty)) -[18) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def]) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)) + +Package rerunfilecheck Warning: File `inversion.out' has changed. +(rerunfilecheck) Rerun to get outlines right +(rerunfilecheck) or use package `bookmark'. + + ) +(see the transcript file for additional information){/usr/share/texlive/texmf-d +ist/fonts/enc/dvips/base/8r.enc}) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) +(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty))< +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)/usr/share/texlive/texmf-dist/fonts/type1/pu +blic/amsfonts/cm/cmr6.pfb>< +(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm +/cmr8.pfb> +(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty< +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty/usr/share/texli +ve/texmf-dist/fonts/type1/urw/courier/ucrb8a.pfb>) +(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty< + +LaTeX Warning: Citation `matplotlib' on page 17 undefined on input line 408. + + +LaTeX Warning: Citation `mayavi' on page 17 undefined on input line 426. + + +LaTeX Warning: Citation `VisIt' on page 17 undefined on input line 426. + +[17/usr/share/texlive/texmf-dist/fonts/type1/ +urw/courier/ucrro8a.pfb> ><]/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> +)))) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi +on.tex) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty [18) ] (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty +Output written on inversion.pdf (90 pages, 5299314 bytes). +Transcript written on inversion.log. + +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def [19]Install file: "debian/tmp3/posix/doc/inversion/inversion.pdf" as "debian/stage3/release/doc/inversion/inversion.pdf" +) +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty [20] (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)g++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_integrate.cpp +) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty [21)] (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty [22) +(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty])) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo kbook_defs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty **************************************** * Local config file subfigure.cfg used * **************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg))) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te +x (/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg [19) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx))] -(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty [20 -(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty)] [21 ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) [24 +(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty ]) +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) +(/usr/share/texlive/texmf-dist/tex/latex/setspace/setspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg)> ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) [25 ] (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx) (/usr/share/texlive/texmf-dist/tex/latex/graphics/dvipsnam.def)) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) -(/usr/share/texlive/texmf-dist/tex/latex/natbib/natbib.sty -[22 ] (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) + +LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 396. + + +LaTeX Warning: Citation `SCIPY' on page 29 undefined on input line 398. + +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex) [29 (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd ]) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc -guide.tex [2]) [3] [4] +guide.tex [30] [2])In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE.cpp:48: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [3] [4] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur rentdev.tex [5]) [6] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.toc [7]) [8] +kbook.toc/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [7] [31]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf +low.tex) [8] [32 ] Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int @@ -10315,7 +10520,11 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui ckstart.tex) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc -pybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))) [10] +pybas.tex + +LaTeX Warning: Citation `LBB' on page 33 undefined on input line 106. + +[33 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)])) [10] Chapter 2. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa @@ -10327,339 +10536,21 @@ \__shipout_drop_firstpage_... l.47 \end{equation} ] [12]>] +six/doc/cookbook/figures/onedheatdiff001.pdf>]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te +x [12] [34] Underfull \hbox (badness 4353) in paragraph at lines 185--185 [][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound ary _ -[13]) [23] [14 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] [15 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.3}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.313 T - here are various ways to construct domain objects. The simplest form ... - ] [16] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) -Underfull \hbox (badness 10000) in paragraph at lines 415--425 - -[17]>] -Chapter 2. - -Underfull \hbox (badness 10000) in paragraph at lines 7--7 -[]\OT1/ptm/m/n/10 Figure 2.1: Mag-netic anomaly data in $\OML/cmm/m/it/10 nT$ \ -OT1/ptm/m/n/10 from West-ern Queens-land, Aus-tralia (file -[25] [26 ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.680 \clearpage - ] -Underfull \hbox (badness 10000) in paragraph at lines 684--692 - - -LaTeX Warning: Float too large for page by 10.55325pt on input line 775. - -[21] [22 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.5}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.776 \clearpage - ]> ] [29 ]> ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.tex [30] -Chapter 3. -) [31] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.tex [32] -Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[][][][][][][][][][][][][][][][][][][][][][][][][] -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple02.tex -Underfull \hbox (badness 10000) in paragraph at lines 17--19 - -[23]>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex [40] -Chapter 4. -[33] [24 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.6}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.109 \end{python} - ] -Chapter 2. - -LaTeX Warning: Citation `OPENMP' on page 41 undefined on input line 46. - - -LaTeX Warning: Citation `MPI' on page 41 undefined on input line 47. - -[41] - -LaTeX Warning: Float too large for page by 10.55325pt on input line 146. - -) [25 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.7}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.108 \chapter - {Heat Diffusion in Two Dimensions} ] -[26 -pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.108 \chapter - {Heat Diffusion in Two Dimensions} ] -Chapter 3. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple03.tex -Underfull \hbox (badness 10000) in paragraph at lines 22--23 - - -Underfull \hbox (badness 10000) in paragraph at lines 22--23 - -[27] -Chapter 3. -[45] [28 -pdfTeX warning (ext4): destination with the same identifier (name{figure.3.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.141 \begin{python} - ] - -LaTeX Warning: Float too large for page by 12.55325pt on input line 232. - -[29] -Underfull \hbox (badness 1648) in paragraph at lines 79--79 -[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac -es in []. An ar-row in-di-cates that a func-tion in the - -LaTeX Warning: Citation `LBB' on page 46 undefined on input line 83. - -[46 ] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) -Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] - - -Underfull \hbox (badness 10000) in paragraph at lines 306--311 - -[30]) [31] [32 -pdfTeX warning (ext4): destination with the same identifier (name{figure.3.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.112 \chapter - {Complex Geometries} ]]) [35] [36]> ] [33 -pdfTeX warning (ext4): destination with the same identifier (name{figure.3.3}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.112 \chapter - {Complex Geometries} -pdfTeX warning (ext4): destination with the same identifier (name{figure.3.4}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.112 \chapter - {Complex Geometries} ]> ]>] [34] -Chapter 4. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.tex [42] -Underfull \hbox (badness 10000) in paragraph at lines 37--41 - -[35])) [36 [43 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.139 \begin{python} - ] [50 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.tex [44]] [37] [38 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.194 \clearpage - ] [47 ]>] -Underfull \hbox (badness 10000) in paragraph at lines 261--261 -[][][]\OT1/ptm/m/n/8 In gen-eral any or-thog-o-nal co-or-di-nate trans-for-ma-t -ion can be sup-ported by build-ing sub-classes of the -[48] -Underfull \hbox (badness 10000) in paragraph at lines 197--202 - -[39] - -LaTeX Warning: Citation `gaussfilter' on page 56 undefined on input line 909. - -[56 [40 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.3}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.276 \clearpage - )]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex [50] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.tex [58] -Underfull \hbox (badness 10000) in paragraph at lines 18--25 - -[41 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.74 l30= - Line(p3, p0) [64]] -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [62] [63 [65]] [64] [65] -Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[66)] [66] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.tex -Chapter 10. -[67] -Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 -\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st -ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 -and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . -[67] [68]) [69] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.tex [70] -Chapter 11. -[71 [68])] [72] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.tex [69 -Chapter 12. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardGravity.tex] [70 [73]] [71 [74]]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagnetic.tex [75] [76] [72] [77]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardMagneticIntensity.tex [78]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardSelfMagnetic.tex [79] [73] - -LaTeX Warning: Citation `lazyauspdc' on page 74 undefined on input line 2248. - -) [80 [74]] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.tex [81]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rward2DMTTEMode.tex [82] -Chapter 4. -[75] [83] [76]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardDCRES.tex [84]ents.h... +[13 [35 ]ents.h... Parsing code for file Smoother.cpp... Parsing code for file solve.cpp... Parsing code for file Solver.cpp... @@ -10750,162 +10641,84 @@ Generating code for file lagrange_functions.h... Parsing code for file RectangleGradients.cpp... Parsing code for file RectangleIntegrals.cpp... -Parsing code f [85])) [86] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.ind - -LaTeX Warning: Citation `Trilinos' on page 77 undefined on input line 181. - - -Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 -\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- -di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt -ions -[77 [87]]) [88] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.bbl [78] [89]) [90] [79 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -version.aux -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/in -tro.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okGravity.aux)] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okMagnetic.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okJointDUMMY.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -okDcRes.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/In -troPart2.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Do -mains.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Mi -nimization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Co -stFunctions.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Da -taSources.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Re -gularization.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Ma -pping.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/inversion/Fo -rwardModels.aux)) - -Package rerunfilecheck Warning: File `inversion.out' has changed. -(rerunfilecheck) Rerun to get outlines right -(rerunfilecheck) or use package `bookmark'. - - ) -(see the transcript file for additional information){/usr/share/texlive/texmf-d -ist/fonts/enc/dvips/base/8r.enc}< [80/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/c -m/cmbx7.pfb>] [81] - -LaTeX Warning: Citation `Trilinos' on page 82 undefined on input line 530. - - -LaTeX Warning: Citation `Trilinos' on page 82 undefined on input line 581. - -[82<]/usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic -/uhvb8a.pfb> - [83] [84] -Output written on inversion.pdf (90 pages, 5298935 bytes). -Transcript written on inversion.log. - - -LaTeX Warning: Citation `MKL' on page 85 undefined on input line 914. - - -LaTeX Warning: Citation `UMFPACK' on page 85 undefined on input line 919. - -[85] - -LaTeX Warning: Citation `Saad' on page 86 undefined on input line 938. - - -LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 943. - - -LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 948. - - -LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 952. - - -LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 973. - - -LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 977. - - -LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 981. - - -LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 985. - - -LaTeX Warning: Citation `Saad' on page 86 undefined on input line 991. - - -LaTeX Warning: Citation `Saad' on page 86 undefined on input line 995. - - -LaTeX Warning: Citation `AMG' on page 86 undefined on input line 999. - - -LaTeX Warning: Citation `Saad' on page 86 undefined on input line 1004. - - -LaTeX Warning: Citation `RILU' on page 86 undefined on input line 1015. - -[86] - -LaTeX Warning: Citation `Trilinos' on page 87 undefined on input line 1043. +Parsing code f [14 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.313 T + here are various ways to construct domain objects. The simplest form ... + ]>] [15 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.3}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.313 T + here are various ways to construct domain objects. The simplest form ... + ] [16] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) [37]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t +ex [38 ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.680 \clearpage + ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE_Points.cpp:38: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +Underfull \hbox (badness 10000) in paragraph at lines 684--692 -LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1057. +LaTeX Warning: Float too large for page by 10.55325pt on input line 775. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping -.tex [87]Install file: "debian/tmp3/posix/doc/inversion/inversion.pdf" as "debian/stage3/release/doc/inversion/inversion.pdf" - [88 ] [89 ] [90 ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.776 \clearpage + ])) -[91 ] [92 ]> ]_optype.h... Generating docs for file escriptcpp.cpp... Generating docs for file EscriptParams.cpp... Generating docs for file EscriptParams.h... @@ -11178,9 +10990,17 @@ Generating docs for file BiCGStab.cpp... Generating docs for file BlockOps.h... Generating docs for file Coupler.cpp... -Generating docs for file Coupler.h.>] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex.. +Generating docs for file Coupler.h. +Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[][][][][][][][][][][][][][][][][][][][][][][][][] +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple02.tex +Underfull \hbox (badness 10000) in paragraph at lines 17--19 + +[23].. Generating docs for file FCT_Solver.cpp... Generating docs for file FCT_Solver.h... Generating docs for file FluxLimiter.cpp... @@ -11271,138 +11091,78 @@ Generating docs for file domainhelpers.cpp... Generating docs for file domainhelpers.h... Generating docs for file domainhelpers.h... -Generating docs for file LameAsse -Chapter 5. - -LaTeX Warning: Citation `GMSH' on page 93 undefined on input line 24. - -[93] - -LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 89. - - -LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 133. - - -LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 145. - +Generating docs for file LameAsse [24 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.6}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.109 \end{python} + ] -LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 154. +LaTeX Warning: Float too large for page by 10.55325pt on input line 146. -[94] [95 ]/build/reproducible-path/python-escript-5.6/dudley/src/DomainFactory.h:69: warning: The following parameters of dudley::brick(escript::JMPI jmpi, dim_t n0=1, dim_t n1=1, dim_t n2=1, int order=1, double l0=1.0, double l1=1.0, double l2=1.0, bool periodic0=false, bool periodic1=false, bool periodic2=false, int integrationOrder=-1, int reducedIntegrationOrder=-1, bool useElementsOnFace=false, bool useFullElementOrder=false, bool optimize=false) are not documented: +) [25 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.7}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.108 \chapter + {Heat Diffusion in Two Dimensions} ]/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h:101: warning: argument 'fileName' of command @param is not found in the argument list of dudley::DudleyDomain::read(escript::JMPI mpiInfo, const std::string &filename, bool optimize) -/build/reproducible-path/python-escript-5.6/dudley/src/DudleyDomain.h:101: warning: The following parameter of dudley::DudleyDomain::read(escript::JMPI mpiInfo, const std::string &filename, bool optimize) is not documented: - parameter 'filename' -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_getNormal.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - [97 ] [98 -] [99] [100] - -LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 579. - - -LaTeX Warning: Citation `RIGHTHANDRULE' on page 101 undefined on input line 600 -. - -[101] - -LaTeX Warning: Citation `GMSH' on page 102 undefined on input line 682. - -[102] - -LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 698. - - -LaTeX Warning: Citation `IDEAS' on page 103 undefined on input line 702. - - -LaTeX Warning: Citation `VRML' on page 103 undefined on input line 706. - - -LaTeX Warning: Citation `STL' on page 103 undefined on input line 710. - - -LaTeX Warning: Citation `NASTRAN' on page 103 undefined on input line 714. - - -LaTeX Warning: Citation `MEDIT' on page 103 undefined on input line 718. - - -LaTeX Warning: Citation `CGNS' on page 103 undefined on input line 722. - - -LaTeX Warning: Citation `PLOT3D' on page 103 undefined on input line 726. - - -LaTeX Warning: Citation `DIFFPACK' on page 103 undefined on input line 730. - - -LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 734. +>] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex [40]> +Chapter 2. +LaTeX Warning: Citation `OPENMP' on page 41 undefined on input line 46. -LaTeX Warning: Citation `TETGEN' on page 103 undefined on input line 734. +LaTeX Warning: Citation `MPI' on page 41 undefined on input line 47. -LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 738. +[41] +[26 +pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.108 \chapter + {Heat Diffusion in Two Dimensions} ] -[103] [104]) [105] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -tex [106] -Chapter 6. +LaTeX Warning: Citation `NUMPY' on page 47 undefined on input line 150. -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess -olver.tex/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1385: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) +[47]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1385: warning: argument 'shape' of command @param is not found in the argument list of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) /build/reproducible-path/python-escript-5.6/escriptcore/src/DataVectorOps.h:1385: warning: The following parameter of escript::reductionOpVector(const DataTypes::RealVectorType &left, const DataTypes::ShapeType &leftShape, DataTypes::RealVectorType::size_type offset, BinaryFunction operation, DataTypes::real_t initial_value) is not documented: parameter 'leftShape' +>] +Chapter 3. - -LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 107 undefined on input line -69. - - -LaTeX Warning: Citation `MBENZI2005' on page 107 undefined on input line 69. - -[107] - -LaTeX Warning: Citation `ELMAN' on page 108 undefined on input line 148. - -[108]mbler2D.cpp... +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple03.texmbler2D.cpp... Generating docs for file LameAssembler2D.h... Generating docs for file LameAssembler3D.cpp... Generating docs for file LameAssembler3D.h... @@ -11494,7 +11254,61 @@ Generating docs for compound dudley::NodeMapping... Generating docs for namespace dudley::util Generating docs for namespace escript -Generating docs for compou [109] [110]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +Generating docs for compou [48] +Underfull \hbox (badness 10000) in paragraph at lines 22--23 + + +Underfull \hbox (badness 10000) in paragraph at lines 22--23 + +[27] [28 +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.141 \begin{python} + ] ] [50] + +LaTeX Warning: Float too large for page by 12.55325pt on input line 232. + +[29] [51] [52] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [53] +Overfull \hbox (46.961pt too wide) in paragraph at lines 286--287 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] + + +Underfull \hbox (badness 10000) in paragraph at lines 306--311 + +[30/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1596: warning: The following parameter of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) is not documented: + parameter 'dummy' +]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:650: warning: The following parameter of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:607: warning: The following parameter of escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const is not documented: + parameter 'dummy' +/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:621: warning: The following parameter of escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +) [54 [31]] [32 +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.112 \chapter + {Complex Geometries} + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +>] [33 +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.3}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.112 \chapter + {Complex Geometries} +pdfTeX warning (ext4): destination with the same identifier (name{figure.3.4}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.112 \chapter + {Complex Geometries} instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + [63]/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:412: warning: The following parameter of escript::DataTagged::getDataByTagRW(int tag, DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' +/build/reproducible-path/python-escript-5.6/escriptcore/src/DataTagged.h:508: warning: The following parameter of escript::DataTagged::getDefaultValueRW(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy=0) is not documented: + parameter 'dummy' + [64>] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd ] [34] +Chapter 4. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple04.tex +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[66]/build/reproducible-path/python-escript-5.6/escriptcore/src/EsysMPI.h:97: warning: explicit link request to 'CPUs' could not be resolved + +Underfull \hbox (badness 10000) in paragraph at lines 37--41 + +[35] +Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 +\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st +ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 +and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . +[67] [36 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.139 \begin{python} + ] [68]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -11535,18 +11397,24 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/Assemble.h:27, - from dudley/src/Assemble_CopyNodalData.cpp:18: + from dudley/src/Assemble_addToSystemMatrix.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ - - -LaTeX Warning: Citation `LBB' on page 111 undefined on input line 334. - -[111]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' +/build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h:532: warning: argument 'Hermitian' of command @param is not found in the argument list of escript::SolverBuddy::setHermitian(bool hermitian) + [69/build/reproducible-path/python-escript-5.6/escriptcore/src/SolverOptions.h:532: warning: The following parameter of escript::SolverBuddy::setHermitian(bool hermitian) is not documented: + parameter 'hermitian' +] [70] [37]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + [38 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.194 \clearpage + + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + [73] + +LaTeX Warning: Citation `lazyauspdc' on page 74 undefined on input line 2248. + +)/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl -ux.tex [112]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + [74] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.tex +Chapter 4. +[75]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_getSize.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [76]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ - [113] [114 ]) +>] -LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 28. +LaTeX Warning: Citation `Trilinos' on page 77 undefined on input line 181. -LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 55. +Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 +\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- +di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt +ions +[77]/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:149: warning: argument 'l0' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) + [78/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:149: warning: argument 'l1' of command @param is not found in the argument list of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) +/build/reproducible-path/python-escript-5.6/finley/src/FinleyDomain.h:149: warning: The following parameters of finley::FinleyDomain::createRec4(dim_t NE0, dim_t NE1, double L0, double L1, bool periodic0, bool periodic1, int order, int reducedOrder, bool useElementsOnFace, bool optimize, escript::JMPI jmpi) are not documented: + parameter 'L0' + parameter 'L1' +] [79] +Underfull \hbox (badness 10000) in paragraph at lines 197--202 -[115] [116] +[39] [40 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.3}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.276 \clearpage + ]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple05.tex -LaTeX Warning: Citation `LBB' on page 117 undefined on input line 206. +LaTeX Warning: Citation `Trilinos' on page 82 undefined on input line 530. -[117] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy -stem.tex/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:1596: warning: The following parameter of escript::Data::getDataAtOffsetRO(DataTypes::RealVectorType::size_type i, DataTypes::real_t dummy) is not documented: - parameter 'dummy' - [118 ]/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:650: warning: The following parameter of escript::Data::getSampleDataByTag(int tag, DataTypes::real_t dummy=0) is not documented: - parameter 'dummy' -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:607: warning: The following parameter of escript::Data::getSampleDataRO(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) const is not documented: - parameter 'dummy' -/build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h:621: warning: The following parameter of escript::Data::getSampleDataRW(DataTypes::RealVectorType::size_type sampleNo, DataTypes::real_t dummy=0) is not documented: - parameter 'dummy' - [119] [120] [121])/build/reproducible-path/python-escript-5.6/escriptcore/src/DataAbstract.h:92: warning: The following parameter of escript::DataAbstract::DataAbstract(const FunctionSpace &what, const ShapeType &shape, bool isDataEmpty=false, bool isCplx=false) is not documented: - parameter 'isCplx' -) [122] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -tex>] -Chapter 7. -LaTeX Warning: Citation `Zienc' on page 123 undefined on input line 74. +LaTeX Warning: Citation `Trilinos' on page 82 undefined on input line 581. +[82] [83 +Underfull \hbox (badness 10000) in paragraph at lines 18--25 -LaTeX Warning: Citation `NumHand' on page 123 undefined on input line 74. +[41] +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.4}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.74 l30= + Line(p3, p0) + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -Underfull \vbox (badness 1226) has occurred while \output is active [124 ] [125 ] [126/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye -lements.tex) [127 -Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 -\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for - the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th -e [] -[42]] [128 [43] -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.5}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.134 \clearpage - ] +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 938. -LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 444. +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 943. -LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 456. -[130]) [131 -Underfull \hbox (badness 10000) in paragraph at lines 137--142 +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 948. -[44] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -tex] [45 [132 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.6}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.199 \clearpage - [134 ]) [135] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.tex [136]> ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t -ex -Chapter 10. -[139> ] [142] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.texIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 977. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 981. + + +LaTeX Warning: Citation `WEISS' on page 86 undefined on input line 985. + + +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 991. + + +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 995. + + +LaTeX Warning: Citation `AMG' on page 86 undefined on input line 999. + + +LaTeX Warning: Citation `Saad' on page 86 undefined on input line 1004. + + +LaTeX Warning: Citation `RILU' on page 86 undefined on input line 1015. + +[86]nd escript::AbsMax... +Generating docs for compound escript::AbstractContinuousDomain... +Generating docs for compound escript::AbstractDomain... +Generating docs for compound escript::AbstractReducer... +Generating docs for compound escript::AbstractSystemMatrix... +Generating docs for compound escript::AbstractTransportProblem... +Generating docs for compound escript::AssertException... +Generating docs for compound escript::Data... +Generating docs for compound escript::DataAbstract... +Generating docs for compound escript::DataConstant... +Generating docs for compound escript::DataEmpty... +Generating docs for compound escript::DataException... +Generating docs for compound escript::DataExpanded... +Generating docs for compound escript::DataLazy... +Generating docs for compound escript::DataReady... +Generating docs for compound escript::DataTagged... +Generating docs for compound escript::Distribution... +Generating docs for compound escript::DomainException... +Generating docs for compound escript::EscriptParams... +Generating docs for compound escript::EsysException... +Generating docs for compound escript::FileWriter... +Generating docs for compound escript::FMax... +Generating docs for compound escript::FMin... +Generating docs for compound escript::FunctionSpace... +Generating docs for compound escript::FunctionSpaceException... +Generating docs for compound escript::IndexList... +Generating docs for compound escript::IOError... +Generating docs for compound escript::JMPI_... +Generating docs for compound escript::LapackInverseHelper... +Generating docs for compound escript::MPIDataReducer... +Generating docs for compound escript::MPIScalarReducer... +Generating docs for compound escript::NoCOMM_WORLD... +Generating docs for compound escript::NonReducedVariable... +Generating docs for compound escript::NotImplementedError... +Generating docs for compound escript::NullDomain... +Generating docs for compound escript::SolverBuddy... +Generating docs for compound escript::SplitWorld... +Generating docs for compound escript::SplitWorldException... +Generating docs for compound escript::SubWorld... +Generating docs for compound escript::SystemMatrixException... +Generating docs for compound escript::Taipan... +Generating docs for nested compound escript::Taipan::Taipan_MemTable... +Generating docs for nested compound escript::Taipan::Taipan_StatTable... +Generating docs for compound escript::TestDomain... +Generating docs for compound escript::TransportProblemException... +Generating docs for compound escript::ValueError... +Generating docs for compound escript::WrappedArray... +Generating docs for namespace escript::DataTypes +Generating docs for compound escript::DataTypes::DataVectorAlt... +Generating docs for compound escript::DataTypes::DataVectorTaipan... +Generating docs for namespace escript::reducerstatus +Generating docs for namespace finley +Generating docs for compound finley::AssembleParameters... +Generating docs for compound finley::ElementFile... +Generating docs for compound finley::ElementFile_Jacobians... +Generating docs for compound finley::FaceCenter... +Generating docs for compound finley::FinleyDomain... +Generating docs for compound finley::FinleyException... +Generating docs for compound finley::NodeFile... +Generating docs for compound finley::NodeMapping... +Generating docs for compound finley::QuadInfo... +Generating docs for compound finley::ReferenceElement... +Generating docs for compound finley::ReferenceElementInfo... +Generating docs for compound finley::ReferenceElementSet... +Generating docs for compound finley::ShapeFunction... +Generating docs for compound finley::ShapeFunctionInfo... +Generating docs for namespace finley::util +Generating docs for namespace paso +Generating docs for compound paso::Connector... +Generating docs for compound paso::Coupler... +Generating docs for compound paso::DegreeAndIdx... +Generating docs for compound paso::FCT_FluxLimiter... +Generating docs for compound paso::FCT_Solver... +Generating docs for compound paso::Function... +Generating docs for compound paso::LinearSystem... +Generating docs for compound paso::MUMPS_H + +LaTeX Warning: Citation `Trilinos' on page 87 undefined on input line 1043. + + +LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1051. + + +LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1054. + + +LaTeX Warning: Citation `AMG' on page 87 undefined on input line 1057. + + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping +.texIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -11740,16 +11697,14 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/Assemble.h:27, - from dudley/src/Assemble_getSize.cpp:18: + from dudley/src/Assemble_CopyNodalData.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ - -Chapter 11. - -LaTeX Warning: Citation `TrilinosWeb' on page 143 undefined on input line 18. - -[143]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + [87]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, @@ -11775,24 +11730,432 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE_Single_3D.cpp:38: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [88In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_getNormal.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE_Single_2D.cpp:38: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +>] [89/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' +> &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + parameter 'subdivisions' +>]/build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h:39: warning: The following parameters of ripley::MultiRectangle::MultiRectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + parameter 'subdivisions' + [90 &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' +> ])) +[91 &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'order' + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' +> ] [92 &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: + parameter 'order' + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' +>] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +ex +Chapter 5. -Underfull \hbox (badness 10000) in paragraph at lines 202--209 +LaTeX Warning: Citation `GMSH' on page 93 undefined on input line 24. + +[93] +LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 89. -Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 -[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ -]. To show sub-domains, we need to go back to [] -[46] [47 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.7}) + +LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 133. + + +LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 145. + + +LaTeX Warning: Citation `GMSH' on page 94 undefined on input line 154. + +[94] [95 ] [96 ] [97 ] [98 +] [99] [100] + +LaTeX Warning: Citation `GMSH' on page 101 undefined on input line 579. + + +LaTeX Warning: Citation `RIGHTHANDRULE' on page 101 undefined on input line 600 +. + +[101] + +LaTeX Warning: Citation `GMSH' on page 102 undefined on input line 682. + +[102] + +LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 698. + + +LaTeX Warning: Citation `IDEAS' on page 103 undefined on input line 702. + + +LaTeX Warning: Citation `VRML' on page 103 undefined on input line 706. + + +LaTeX Warning: Citation `STL' on page 103 undefined on input line 710. + + +LaTeX Warning: Citation `NASTRAN' on page 103 undefined on input line 714. + + +LaTeX Warning: Citation `MEDIT' on page 103 undefined on input line 718. + + +LaTeX Warning: Citation `CGNS' on page 103 undefined on input line 722. + + +LaTeX Warning: Citation `PLOT3D' on page 103 undefined on input line 726. + + +LaTeX Warning: Citation `DIFFPACK' on page 103 undefined on input line 730. + + +LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 734. + + +LaTeX Warning: Citation `TETGEN' on page 103 undefined on input line 734. + + +LaTeX Warning: Citation `GMSH' on page 103 undefined on input line 738. + + +LaTeX Warning: Citation `NETGEN' on page 103 undefined on input line 742. + +[103] [104]) [105] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +tex [106] +Chapter 6. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess +olver.tex + +LaTeX Warning: Citation `AAMIRBERKYAN2008' on page 107 undefined on input line +69. + + +LaTeX Warning: Citation `MBENZI2005' on page 107 undefined on input line 69. + +[107]andler... +Generating docs for compound paso::MUMPS_Handler< cplx_t >... +Generating docs for compound paso::MUMPS_Handler< double >... +Generating docs for compound paso::MUMPS_Handler_t... +Generating docs for compound paso::Options... +Generating docs for compound paso::PasoException... +Generating docs for compound paso::Pattern... +Generating docs for compound paso::Performance... +Generating docs for compound paso::Preconditioner... +Generating docs for compound paso::Preconditioner_LocalSmoother... +Generating docs for compound paso::Preconditioner_Smoother... +Generating docs for compound paso::ReactiveSolver... +Generating docs for compound paso::SharedComponents... +Generating docs for compound paso::Solver_ILU... +Generating docs for compound paso::Solver_RILU... +Generating docs for compound paso::SparseMatrix... +Generating docs for compound paso::SystemMatrix... +Generating docs for compound paso::SystemMatrixPattern... +Generating docs for compound paso::TransportProblem... +Generating docs for compound paso::UMFPACK_Handler... +Generating docs for namespace paso::util +Generating docs for namespace ripley +Generating docs for compound ripley::AbstractAssembler... +Generating docs for compound ripley::Brick... +Generating docs for compound ripley::DefaultAssembler2D... +Generating docs for compound ripley::DefaultAssembler3D... +Generating docs for compound ripley::DiracPoint... +Generating docs for compound ripley::LameAssembler2D... +Generating docs for compound ripley::LameAssembler3D... +Generating docs for compound ripley::MultiBrick... +Generating docs for compound ripley::MultiRectangle... +Generating docs for compound ripley::ReaderParameters... +Generating docs for compound ripley::Rectangle... +Generating docs for compound ripley::RipleyDomain... +Generating docs for compound ripley::RipleyException... +Generating docs for compound ripley::SystemMatrix... +Generating docs for compound ripley::WaveAssembler2D... +Generating docs for compound ripley::WaveAssembler3D... +Generating docs for namespace speckley +Generating docs for compound speckley::AbstractAssembler... +Generating docs for compound speckley::Brick... +Generating docs for compound speckley::DefaultAssembler2D... +Generating docs for compound speckley::DefaultAssembler3D... +Generating docs for compound speckley::DiracPoint... +Generating docs for compound speckley::ReaderParameters... +Generating docs for compound speckley::Rectangle... +Generating docs for compound speckley::RipleyCoupler... +Generating docs for nested compound speckley::RipleyCoupler::Ripley... +Generating docs for compound speckley::SpeckleyDomain... +Generating docs for compound speckley::SpeckleyException... +Generating docs for compound speckley::WaveAssembler2D... +Generating docs for compound speckley::WaveAssembler3D... +Generating docs for namespace weipa +Generating docs for compound weipa::DataVar... +Generating docs for compound weipa::DomainChunk... +Generating docs for compound weipa::ElementData... +Generating docs for compound weipa::EscriptDataset... +Generating docs for compound weipa::FinleyDomain... +Generating docs for compound weipa::FinleyElementInfo... +Generating docs for compound weipa::FinleyElements... +Generating docs for compound weipa::FinleyNodes... +Generating docs for compound weipa::NodeData... +Generating docs for compound weipa::QuadMaskInfo... +Generating docs for compound weipa::RipleyDomain... +Generating docs for compound weipa::RipleyElements... +Generating docs for compound weipa::RipleyNodes... +Generating docs for compound weipa::SpeckleyDomain... +Generating docs for compound weipa::SpeckleyElements... +Generating docs for compound weipa::SpeckleyNodes... +Generating docs for compound weipa::VarInfo... +Generating docs for compound weipa::VisItData... +Generating docs for compound weipa::WeipaException... +Generating docs for namespace weipa::VisItControl +Generating graph info page... +Generating directory documentation... +Generating index page... +Generating page index... +Generating module index... +Generating namespace index... +Generating namespace member index... +Generating concept index... + + +LaTeX Warning: Citation `ELMAN' on page 108 undefined on input line 148. + +[108] [109] [110] + +LaTeX Warning: Citation `LBB' on page 111 undefined on input line 334. + +[111]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl +ux.tex [112] [113] [114 ]) + +LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 28. + + +LaTeX Warning: Citation `Muhlhaus2005' on page 115 undefined on input line 55. + +[115] [116] + +LaTeX Warning: Citation `LBB' on page 117 undefined on input line 206. + +[117] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy +stem.tex [118 ] [119]Generating annotated compound index... +Generating alphabetical compound index... +Generating hierarchical class index... +Generating member index... +Generating file index... +Generating file member index... +Generating example index... +finalizing index lists... +writing tag file... +Running plantuml with JAVA... +lookup cache used 22548/65536 hits=343931 misses=23725 +finished... + [120] [121])) [122] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +texg++ -o debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_LumpedSystem.cpp + +Chapter 7. + +LaTeX Warning: Citation `Zienc' on page 123 undefined on input line 74. + + +LaTeX Warning: Citation `NumHand' on page 123 undefined on input line 74. + +[123] +Underfull \vbox (badness 1226) has occurred while \output is active [124 ] [125 ] [126] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finleye +lements.tex) [127] [128] +Underfull \hbox (badness 1910) in paragraph at lines 383--383 +[]\OT1/ptm/m/n/10 Table 7.2: Solvers avail-able for [] and the \OT1/pcr/m/n/10 +PASO [][]\OT1/ptm/m/n/10 pack-age and the rel-e-vant op-tions in + +Underfull \vbox (badness 1337) has occurred while \output is active [129 ] + +LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 444. + + +LaTeX Warning: Citation `GMSH' on page 130 undefined on input line 456. + +[130]) [131] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +tex [132] +Chapter 8. +[133] [134 ]) [135] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle +y.tex [136]>] +Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 +\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for + the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th +e [] +[42] [43 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.5}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.134 \clearpage + ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.t +ex>] +Chapter 10. +[139] + +LaTeX Warning: Citation `GOCAD' on page 140 undefined on input line 136. + +[140] + +LaTeX Warning: Citation `VisIt' on page 141 undefined on input line 174. + +[141 +Underfull \hbox (badness 10000) in paragraph at lines 137--142 + +[44] [45 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.6}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... -l.291 \clearpage +l.199 \clearpage instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ +/doc/cookbook/figures/heatrefractiontdp.png]) [142] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.tex +Chapter 11. +LaTeX Warning: Citation `TrilinosWeb' on page 143 undefined on input line 18. + +[143]> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_getAssembleParameters.cpp:24: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - +[146]> instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ ->] -Underfull \hbox (badness 10000) in paragraph at lines 294--299 +[148]>] [149] +Underfull \hbox (badness 10000) in paragraph at lines 202--209 -[48 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8}) + +Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 +[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ +]. To show sub-domains, we need to go back to [] +[46] [47 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.7}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... -l.305 \clearpage +l.291 \clearpage + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ - [150]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -nd escript::AbsMax... -Generating docs for compound escript::AbstractContinuousDomain... -Generating docs for compound escript::AbstractDomain... -Generating docs for compound escript::AbstractReducer... -Generating docs for compound escript::AbstractSystemMatrix... -Generating docs for compound escript::AbstractTransportProblem... -Generating docs for compound escript::AssertException... -Generating docs for compound escript::Data... -Generating docs for compound escript::DataAbstract... -Generating docs for compound escript::DataConstant... -Generating docs for compound escript::DataEmpty... -Generating docs for compound escript::DataException... -Generating docs for compound escript::DataExpanded... -Generating docs for compound escript::DataLazy... -Generating docs for compound escript::DataReady... -Generating docs for compound escript::DataTagged... -Generating docs for compound escript::Distribution... -Generating docs for compound escript::DomainException... -Generating docs for compound escript::EscriptParams... -Generating docs for compound escript::EsysException... -Generating docs for compound escript::FileWriter... -Generating docs for compound escript::FMax... -Generating docs for compound escript::FMin... -Generating docs for compound escript::FunctionSpace... -Generating docs for compound escript::FunctionSpaceException... -Generating docs for compound escript::IndexList... -Generating docs for compound escript::IOError... -Generating docs for compound escript::JMPI_... -Generating docs for compound escript::LapackInverseHelper... -Generating docs for compound escript::MPIDataReducer... -Generating docs for compound escript::MPIScalarReducer... -Generating docs for compound escript::NoCOMM_WORLD... -Generating docs for compound escript::NonReducedVariable... -Generating docs for compound escript::NotImplementedError... -Generating docs for compound escript::NullDomain... -Generating docs for compound escript::SolverBuddy... -Generating docs for compound escript::SplitWorld... -Generating docs for compound escript::SplitWorldException... -Generating docs for compound escript::SubWorld... -Generating docs for compound escript::SystemMatrixException... -Generating docs for compound escript::Taipan... -Generating docs for nested compound escript::Taipan::Taipan_MemTable... -Generating docs for nested compound escript::Taipan::Taipan_StatTable... -Generating docs for compound escript::TestDomain... -Generating docs for compound escript::TransportProblemException... -Generating docs for compound escript::ValueError... -Generating docs for compound escript::WrappedArray... -Generating docs for namespace escript::DataTypes -Generating docs for compound escript::DataTypes::DataVectorAlt... -Generating docs for compound escript::DataTypes::DataVectorTaipan... -Generating docs for namespace escript::reducerstatus -Generating docs for namespace finley -Generating docs for compound finley::AssembleParameters... -Generating docs for compound finley::ElementFile... -Generating docs for compound finley::ElementFile_Jacobians... -Generating docs for compound finley::FaceCenter... -Generating docs for compound finley::FinleyDomain... -Generating docs for compound finley::FinleyException... -Generating docs for compound finley::NodeFile... -Generating docs for compound finley::NodeMapping... -Generating docs for compound finley::QuadInfo... -Generating docs for compound finley::ReferenceElement... -Generating docs for compound finley::ReferenceElementInfo... -Generating docs for compound finley::ReferenceElementSet... -Generating docs for compound finley::ShapeFunction... -Generating docs for compound finley::ShapeFunctionInfo... -Generating docs for namespace finley::util -Generating docs for namespace paso -Generating docs for compound paso::Connector... -Generating docs for compound paso::Coupler... -Generating docs for compound paso::DegreeAndIdx... -Generating docs for compound paso::FCT_FluxLimiter... -Generating docs for compound paso::FCT_Solver... -Generating docs for compound paso::Function... -Generating docs for compound paso::LinearSystem... -Generating docs for compound paso::MUMPS_H>]) -Chapter 5. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple07.tex +/doc/cookbook/figures/heatrefractionflux.png [150] Overfull \hbox (63.16116pt too wide) in paragraph at lines 454--455 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] @@ -12006,21 +12211,48 @@ Overfull \hbox (63.16116pt too wide) in paragraph at lines 466--467 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -[151] [49] -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - - -Underfull \hbox (badness 10000) in paragraph at lines 154--155 +[151]) [152]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_2D.cpp -[50]) [152] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli -c.tex [51] +c.tex Chapter 12. LaTeX Warning: Citation `Sympy' on page 153 undefined on input line 20. Underfull \vbox (badness 10000) has occurred while \output is active [153] +[154]>] +Underfull \hbox (badness 10000) in paragraph at lines 294--299 + +[48 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.305 \clearpage + g++ -o debian/tmp3/posix/dudley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_interpolate.cpp + +]>]) +Chapter 5. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple07.tex [49] [157] +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + + +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + +[50] [51)] [158] Underfull \hbox (badness 10000) in paragraph at lines 279--280 @@ -12033,8 +12265,9 @@ \__shipout_drop_firstpage_... l.280 ] -[154] [53]) [54 +ook/figures/sourceline.png +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.tex>] [53]) [54 pdfTeX warning (ext4): destination with the same identifier (name{figure.5.2}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12048,45 +12281,12 @@ Chapter 6. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple08.texIn file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_addToSystemMatrix.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/python-escript-5.6/ripley/src/Brick.h:44: warning: The following parameters of ripley::Brick::Brick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - +mple08.tex +Chapter 13. +[159] Underfull \hbox (badness 10000) in paragraph at lines 18--24 -[55]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - - -LaTeX Warning: `!h' float specifier changed to `!ht'. - -[155] +[55] [160] Underfull \hbox (badness 10000) in paragraph at lines 139--145 [56 @@ -12095,9 +12295,15 @@ ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.156 # - set initial values for first two time steps with source terms] [156 < /build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu res/ex08pw650.png (PNG copy)> ]> &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - parameter 'subdivisions' - +an/tmp3/posix/doc/cookbook/figures/ex08pw950.png (PNG copy)>] +Appendix B. +[165] [166] [167] [168] Underfull \hbox (badness 10000) in paragraph at lines 218--223 [59 @@ -12126,37 +12327,38 @@ \__shipout_drop_firstpage_... l.273 t= t+h; n=n+1 - &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - parameter 'subdivisions' ->]>] [157]) [158/build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h:44: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' -] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.tex +ix/doc/cookbook/figures/source.png [169] [170] [171]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet +edevs.tex [172] +Appendix C. +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs +.tex [173] [174] +Appendix D. +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty>]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) Package natbib Warning: Citation `Cerjan1985' on page 60 undefined on input lin e 293. -[60] [61 -Chapter 13. -[159 +[60] [175]) [61 pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.392 \clearpage ]] [62 +/doc/cookbook/figures/ex08babc.png +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex +[176] +Appendix E. +)) [177] [178] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.in +dg++ -o debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_NodeCoordinates.cpp + [179] [180] [181]) [182] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.bb +l>] [183 [62] pdfTeX warning (ext4): destination with the same identifier (name{figure.6.4}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12167,119 +12369,7 @@ n-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG copy)> ] -Underfull \hbox (badness 10000) in paragraph at lines 395--399 - -) [63 -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.5}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.125 \chapter - {3D Seismic Wave Propagation} ] [64 -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.6}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.125 \chapter - {3D Seismic Wave Propagation} ] [161 -Chapter 7. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple09.tex]) [162] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi -x.tex -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/notatio -n.tex -Appendix A. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/changes -.tex [163] -Underfull \hbox (badness 10000) in paragraph at lines 17--21 - -[65 [164]] -Appendix B. -[165]/build/reproducible-path/python-escript-5.6/speckley/src/Brick.h:42: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'order' - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - [166] [167] [168] [66] [169] [67] [68 [170 ]] [171 [69] -pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.186 \clearpage - ] [172] -Appendix C. -) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs -.tex [173] [174]/build/reproducible-path/python-escript-5.6/speckley/src/Rectangle.h:40: warning: The following parameters of speckley::Rectangle::Rectangle(int order, dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: - parameter 'order' - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - -Appendix D. -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty -Underfull \hbox (badness 10000) in paragraph at lines 202--209 - - -Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223 -[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ -][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] -)) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty [70]) [71 ] [72] -Chapter 8. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple10.tex - -Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li -ne 27. - -[73] [175] [74]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex -[176] -Appendix E. -)) [177] [178] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.in -d [179 -Underfull \hbox (badness 10000) in paragraph at lines 93--97 - -[75]] [76 -pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.177 \clearpage - -pdfTeX warning (ext4): destination with the same identifier (name{figure.8.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.177 \clearpage - ]) [184] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au x (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria @@ -12332,31 +12422,52 @@ usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb> +Underfull \hbox (badness 10000) in paragraph at lines 395--399 + +) +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.5}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.125 \chapter + {3D Seismic Wave Propagation} ]> [64 +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.6}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.125 \chapter + {3D Seismic Wave Propagation} ]>< +crro8a.pfb> +Chapter 7. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple09.tex< /usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb>> @@ -12366,11 +12477,124 @@ This is makeindex, version 2.16 [TeX Live 2022] (kpathsea + Thai support). Scanning input file user.idx....done (716 entries accepted, 12 rejected). Sorting entries........done (7112 comparisons). -Generating output file user.ind....done (353 lines written, 0 warnings). + +Underfull \hbox (badness 10000) in paragraph at lines 17--21 + +[65Generating output file user.ind....done (353 lines written, 0 warnings). Output written in user.ind. Transcript written in user.ilg. -cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex ->] [77 +]cd debian/tmp3/posix/doc/user && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{user.tex} user.tex +This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) + restricted \write18 enabled. + [66] [67] [68 ] [69 +pdfTeX warning (ext4): destination with the same identifier (name{figure.7.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.186 \clearpage + ]entering extended mode +LaTeX2e <2022-11-01> patch level 1 +L3 programming layer <2023-01-16> +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te +x +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc +.cls +Document Class: esysdoc +(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls +Document Class: book 2022/07/02 v1.4n Standard LaTeX document class +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) +(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) +Underfull \hbox (badness 10000) in paragraph at lines 202--209 + + +Overfull \hbox (25.36078pt too wide) in paragraph at lines 222--223 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +) [70 +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty] +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty [71 ] [72] +Chapter 8. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple10.tex + +Package geometry Warning: Over-specification in `h'-direction. + `width' (478.00812pt) is ignored. + +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty + +Package natbib Warning: Citation `Blakely1995' on page 73 undefined on input li +ne 27. + +[73] [74 +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) +Underfull \hbox (badness 10000) in paragraph at lines 93--97 + +[75 +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty] [76 +pdfTeX warning (ext4): destination with the same identifier (name{figure.8.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.177 \clearpage + +pdfTeX warning (ext4): destination with the same identifier (name{figure.8.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.177 \clearpage + ))] [77 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12383,94 +12607,121 @@ \__shipout_drop_firstpage_... l.177 \clearpage ... -Generating docs for compound paso::MUMPS_Handler< double >... -Generating docs for compound paso::MUMPS_Handler_t... -Generating docs for compound paso::Options... -Generating docs for compound paso::PasoException... -Generating docs for compound paso::Pattern... -Generating docs for compound paso::Performance... -Generating docs for compound paso::Preconditioner... -Generating docs for compound paso::Preconditioner_LocalSmoother... -Generating docs for compound paso::Preconditioner_Smoother... -Generating docs for compound paso::ReactiveSolver... -Generating docs for compound paso::SharedComponents... -Generating docs for compound paso::Solver_ILU... -Generating docs for compound paso::Solver_RILU... -Generating docs for compound paso::SparseMatrix... -Generating docs for compound paso::SystemMatrix... -Generating docs for compound paso::SystemMatrixPattern... -Generating docs for compound paso::TransportProblem... -Generating docs for compound paso::UMFPACK_Handler... -Generating docs for namespace paso::util -Generating docs for namespace ripley -Generating docs for compound ripley::AbstractAssembler... -Generating docs for compound ripley::Brick... -Generating docs for compound ripley::DefaultAssembler2D... -Generating docs for compound ripley::DefaultAssembler3D... -Generating docs for compound ripley::DiracPoint... -Generating docs for compound ripley::LameAssembler2D... -Generating docs for compound ripley::LameAssembler3D... -Generating docs for compound ripley::MultiBrick... -Generating docs for compound ripley::MultiRectangle... -Generating docs for compound ripley::ReaderParameters... -Generating docs for compound ripley::Rectangle... -Generating docs for compound ripley::RipleyDomain... -Generating docs for compound ripley::RipleyException... -Generating docs for compound ripley::SystemMatrix... -Generating docs for compound ripley::WaveAssembler2D... -Generating docs for compound ripley::WaveAssembler3D... -Generating docs for namespace speckley -Generating docs for compound speckley::AbstractAssembler... -Generating docs for compound speckley::Brick... -Generating docs for compound speckley::DefaultAssembler2D... -Generating docs for compound speckley::DefaultAssembler3D... -Generating docs for compound speckley::DiracPoint... -Generating docs for compound speckley::ReaderParameters... -Generating docs for compound speckley::Rectangle... -Generating docs for compound speckley::RipleyCoupler... -Generating docs for nested compound speckley::RipleyCoupler::Ripley... -Generating docs for compound speckley::SpeckleyDomain... -Generating docs for compound speckley::SpeckleyException... -Generating docs for compound speckley::WaveAssembler2D... -Generating docs for compound speckley::WaveAssembler3D... -Generating docs for namespace weipa -Generating docs for compound weipa::DataVar... -Generating docs for compound weipa::DomainChunk... -Generating docs for compound weipa::ElementData... -Generating docs for compound weipa::EscriptDataset... -Generating docs for compound weipa::FinleyDomain... -Generating docs for compound weipa::FinleyElementInfo... -Generating docs for compound weipa::FinleyElements... -Generating docs for compound weipa::FinleyNodes... -Generating docs for compound weipa::NodeData... -Generating docs for compound weipa::QuadMaskInfo... -Generating docs for compound weipa::RipleyDomain... -Generating docs for compound weipa::RipleyElements... -Generating docs for compound weipa::RipleyNodes... -Generating docs for compound weipa::SpeckleyDomain... -Generating docs for compound weipa::SpeckleyElements... -Generating docs for compound weipa::SpeckleyNodes... -Generating docs for compound weipa::VarInfo... -Generating docs for compound weipa::VisItData... -Generating docs for compound weipa::WeipaException... -Generating docs for namespace weipa::VisItControl -Generating graph info page... -Generating directory documentation... -Generating index page... -Generating page index... -Generating module index... -Generating namespace index... -Generating namespace member index... -Generating concept index... -> +))) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.styg++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_3D.cpp + +(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo +.tex)In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_integrate.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + +Writing index file user.idx +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au +x +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP +DE.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a +ux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. +aux/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. +aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle +y.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a +ux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino +s.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli +c.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl +ds.aux) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi +x.aux)) +*geometry* driver: auto-detecting +*geometry* detected driver: pdftex +(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii +[Loading MPS to PDF converter (version 2006.09.02).] +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))> ] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) [1g++ -o debian/tmp3/posix/dudley/src/dudleycpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/dudleycpp.cpp +{/var/lib/texmf/fo +nts/map/pdftex/updmap/pdftex.map}] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/copyrig +hts.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/docguid +e.tex [2]) [3] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) +[4] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/current +dev.tex [5]) [6] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to +c Underfull \hbox (badness 10000) in paragraph at lines 180--184 -[78] [79 +[78] [7] [79 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.5}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12484,7 +12735,7 @@ l.246 \clearpage ] +-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex10bpot2.png (PNG copy)>] [8] [80 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.7}) has been already used, duplicate ignored @@ -12492,47 +12743,23 @@ \__shipout_drop_firstpage_... l.246 \clearpage ]entering extended mode -LaTeX2e <2022-11-01> patch level 1 -L3 programming layer <2023-01-16> -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.te -x -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/esysdoc -.cls -Document Class: esysdoc -(/usr/share/texlive/texmf-dist/tex/latex/base/book.cls -Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) -(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -Underfull \hbox (badness 10000) in paragraph at lines 275--281 - -[81]Generating annotated compound index... -Generating alphabetical compound index... -Generating hierarchical class index... -Generating member index... -Generating file index... -Generating file member index... -Generating example index... -finalizing index lists... -writing tag file... -Running plantuml with JAVA... -lookup cache used 22548/65536 hits=343931 misses=23725 -finished... - -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) +/doc/cookbook/figures/ex10p_boundeff.pdf>] [9]) [10Install file: "paso/src/Transport.h" as "debian/stage3/include/paso/Transport.h" +] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria +lPDE.tex +Chapter 1. -Package geometry Warning: Over-specification in `h'-direction. - `width' (478.00812pt) is ignored. +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst +ep.tex [11 ] [12] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) [13 ] +Underfull \hbox (badness 10000) in paragraph at lines 275--281 -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) [82] [83 -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty +[81]g++ -o debian/tmp3/posix/dudley/src/DudleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/DudleyDomain.cpp + [14]g++ -o debian/tmp3/posix/dudley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile.cpp + [82] [83 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -12547,33 +12774,25 @@ ] -) -(/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty[84 +[84 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.10}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.449 \clearpage -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty] [85 -(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty +/doc/cookbook/figures/ex10q_boundeff.pdf>] [85 pdfTeX warning (ext4): destination with the same identifier (name{figure.8.11}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.449 \clearpage ]) [86g++ -o debian/tmp3/posix/dudley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_integrate.cpp -]) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def +/doc/cookbook/figures/ex10q_boundeff_zoom.pdf>]) [15] [86] Chapter 9. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.tex))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +mple11.tex Package natbib Warning: Citation `Loke2004' on page 87 undefined on input line 24. @@ -12594,25 +12813,21 @@ ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.bbl -For additional information on amsmath, use the `?' option. -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty [87 -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))] [88 -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +kbook.bbl [87] [16 [88 pdfTeX warning (ext4): destination with the same identifier (name{figure.9.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.1 \begin{thebibliography}{5} ])) +ian/tmp3/posix/doc/cookbook/figures/ex11cstreamline.png ]>]) Package natbib Warning: There were undefined citations. -[89 -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty] +[89] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.aux) +kbook.aux Package natbib Warning: Citation(s) may have changed. (natbib) Rerun to get citations correct. @@ -12771,75 +12986,51 @@ pdfTeX warning (dest): name{Hfootnote.1} has been referenced but does not exist , replaced by a fixed one -{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc}<)/usr/share/texlive/ +{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc})) -(/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) [17]>) -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty<)/usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrr8a -.pfb> -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty [18< >])<)/usr/share/texlive/texmf-dist/fonts/type1/ur -w/times/utmbi8a.pfb> -(/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) -(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) -Output written on cookbook.pdf (89 pages, 4412435 bytes). +/fonts/type1/urw/times/utmb8a.pfb> [19 +Output written on cookbook.pdf (89 pages, 4412560 bytes). Transcript written on cookbook.log. - -(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) -(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.stycd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex -))) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) -(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) + [20]cd debian/tmp3/posix/doc/cookbook && pdflatex -interaction=nonstopmode -recorder -interaction=nonstopmode \\newcommand{\\RepVersion}{-2\\xspace}\\input{cookbook.tex} cookbook.tex + [21]This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022/Debian) (preloaded format=pdflatex) restricted \write18 enabled. - -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def -(/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) -(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty -(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) -(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty) -(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user_de -fs.tex (/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.sty -**************************************** -* Local config file subfigure.cfg used * -**************************************** -(/usr/share/texlive/texmf-dist/tex/latex/subfigure/subfigure.cfg)) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx))entering extended mode + [22]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/wave.te +x [23 ] [24 ]g++ -o debian/tmp3/posix/dudley/src/ElementFile_createColoring.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_createColoring.cpp + [25 ] [26]entering extended mode LaTeX2e <2022-11-01> patch level 1 L3 programming layer <2023-01-16> (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo @@ -12849,147 +13040,112 @@ Document Class: esysdoc (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2022/07/02 v1.4n Standard LaTeX document class -(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo) -(/usr/share/texlive/texmf-dist/tex/latex/ccaption/ccaption.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) -(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty) - -LaTeX Warning: \include should only be used after \begin{document} on input lin -e 183. - - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/elist.t -ex -(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/listing/listing.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty +(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)) Package geometry Warning: Over-specification in `h'-direction. `width' (478.00812pt) is ignored. -) -Package `listing', V1.2, <1999/05/25> -) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty))) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty -(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)))) +) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.sty [27] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstmisc.sty) +(/usr/share/texlive/texmf-dist/tex/latex/listings/listings.cfg)) +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifpdf.sty) -(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/verinfo -.tex) -(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) +(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty) [28 +(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty ) ] (/usr/share/texlive/texmf-dist/tex/latex/tools/xspace.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty -(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty +(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb +lock.tex (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) -(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def) -Writing index file user.idx -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd))) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def +(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) [29 ] +(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty [30] For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.au -x -(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.aux) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.aux)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript -.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/linearP -DE.aux) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.a -ux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. -aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -aux)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -aux +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty) [31] +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf +low.tex) [32 ] (/usr/share/texlive/texmf-dist/tex/latex/underscore/underscore.sty) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.aux)) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/weipa.a -ux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.aux) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/symboli -c.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl -ds.aux) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/appendi -x.aux -(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty))) -(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) +(/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty [33] (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) +(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/slip.te +x (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty -(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) -(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty -(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty -*geometry* driver: auto-detecting -*geometry* detected driver: pdftex -(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii))) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def -[Loading MPS to PDF converter (version 2006.09.02).] -)) -(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty [34] +(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) [35 ] +(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) +[36 ] +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) +(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) -(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))) -(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) +(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def [37]) +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t +ex) [38 +(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty )) \gdef\@extra@binfo{}\@writefile{toc}{\gdef \the@ipfilectr{}}\@writefile{lof}{\g @@ -13007,11 +13163,9 @@ ) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/ver info.tex) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.to -c Writing index file cookbook.idx (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1ptm.fd) -(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) [7 +(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo kbook.aux @@ -13038,31 +13192,24 @@ LaTeX Warning: Label `sub@fig:ex9b 201' multiply defined. -)] +) *geometry* driver: auto-detecting *geometry* detected driver: pdftex (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] -) [8 (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty -(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)]) +) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty +(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1phv.fd) -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) [9] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ot1pcr.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) -(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd)) [10] [1{/var/lib/texmf/fo +(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Tutoria -lPDE.tex (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/doc -guide.tex [2]) [3] -Chapter 1. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/firstst -ep.tex [4] +guide.tex [2]) [3] [4] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/cur rentdev.tex [5]) [6] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/coo -kbook.toc [7]) [8 [11] ] +kbook.toc [7]) [8] Chapter 1. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/int @@ -13070,8 +13217,7 @@ (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/qui ckstart.tex) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/esc -pybas.tex [12 (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)])) [10] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty +pybas.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd))) [10] Chapter 2. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa @@ -13083,7 +13229,7 @@ \__shipout_drop_firstpage_... l.47 \end{equation} ]) [12] +six/doc/cookbook/figures/onedheatdiff001.pdf>] [12] Underfull \hbox (badness 4353) in paragraph at lines 185--185 [][]\OT1/ptm/m/n/8 More in-for-ma-tion on Bound-ary Con-di-tions is avail-able at Wikipedia [][]$\OT1/pcr/m/n/8 http : / / en . wikipedia . org / wiki / Bound @@ -13096,9 +13242,7 @@ l.313 T here are various ways to construct domain objects. The simplest form ... ]>] [15 +gures/workflow.png>] [15 pdfTeX warning (ext4): destination with the same identifier (name{figure.2.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13107,30 +13251,37 @@ here are various ways to construct domain objects. The simplest form ... ] [16] -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) [14] +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty)>] Underfull \hbox (badness 10000) in paragraph at lines 415--425 -[17] [15] [18]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_2D.cpp - [16 ] +[17])) [39 ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/diffusi -on.tex [20 +[19]>] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute +.tex [40] [20 pdfTeX warning (ext4): destination with the same identifier (name{figure.2.4}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.680 \clearpage ] [19]>] [20] +/doc/cookbook/figures/ttblockspyplot150.png +Chapter 2. +[41] [42]) [43] [44] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/escript +.tex>] +Chapter 3. +[45] +Underfull \hbox (badness 1648) in paragraph at lines 79--79 +[] \OT1/ptm/m/sc/9 Fig-ure 3.1\OT1/ptm/m/n/9 : []De-pen-dency of func-tion spac +es in []. An ar-row in-di-cates that a func-tion in the +[46 ] [47] Underfull \hbox (badness 10000) in paragraph at lines 684--692 @@ -13143,109 +13294,96 @@ \__shipout_drop_firstpage_... l.776 \clearpage ] [24 ]> ]> ] [26>]]g++ -o debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_LumpedSystem.cpp - +spyplot200.png [53] [54]>] +Underfull \vbox (badness 1348) has occurred while \output is active [55] +[56] [57] Overfull \hbox (3.76056pt too wide) in paragraph at lines 797--798 [][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ ][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][] [][][][][][][][][][][][][][][][][][][][][][][][][] ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple02.tex [27] +mple02.tex [58] [59] Underfull \hbox (badness 10000) in paragraph at lines 17--19 -[23]g++ -o debian/tmp3/posix/dudley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_interpolate.cpp - -(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [28 ] [24 +[23] [60] [61] [62] [63 [24] pdfTeX warning (ext4): destination with the same identifier (name{figure.2.6}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.109 \end{python} ]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/heatedb -lock.tex [29 ] +ix/doc/cookbook/figures/onedheatdiff002.pdf>] LaTeX Warning: Float too large for page by 10.55325pt on input line 146. -) [25 +) [25 [64 pdfTeX warning (ext4): destination with the same identifier (name{figure.2.7}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.108 \chapter {Heat Diffusion in Two Dimensions} ]) +on-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ttrodpyplot150.png] +(/usr/share/texlive/texmf-dist/tex/latex/psnfss/omspcr.fd) [65] +Overfull \hbox (30.76083pt too wide) in paragraph at lines 1718--1719 +[][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][][ +][][][][][][][][][][][][][][][][][][][][][][][][][][][][] +[66]>] [26 -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokesf -low.tex +Overfull \hbox (10.1535pt too wide) in paragraph at lines 1742--1743 +\OT1/pcr/m/n/10 Data \OT1/ptm/m/n/10 ob-jects can be con-verted into a numpy st +ruc-tured ar-ray us-ing the com-mands \OT1/pcr/m/n/10 getNumpy \OT1/ptm/m/n/10 +and \OT1/pcr/m/n/10 convertNumpy\OT1/ptm/m/n/10 . +[67 pdfTeX warning (ext4): destination with the same identifier (name{figure.2.8}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.108 \chapter {Heat Diffusion in Two Dimensions} ] [33]> ) ]>] +dpyplot050.png [72]> ] Chapter 3. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa mple03.tex -[36 ] +Overfull \hbox (18.97215pt too wide) in paragraph at lines 180--182 +\OT1/ptm/m/n/10 Typically, a neg-a-tive value for a di-ag-nos-tic vari-able in- +di-cates that it is un-de-fined. For more de-tails on \OT1/pcr/m/n/10 SolverOpt +ions +[77] [78] [79] [80] [81] Underfull \hbox (badness 10000) in paragraph at lines 22--23 Underfull \hbox (badness 10000) in paragraph at lines 22--23 -[27] [28 +[27] [82] [83] [28 pdfTeX warning (ext4): destination with the same identifier (name{figure.3.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.141 \begin{python} ] [37]) -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/dirac.t -ex [38 ] [84] [85] [86] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/lumping +.tex LaTeX Warning: Float too large for page by 12.55325pt on input line 232. -[29] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) +[29] [87] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd [88) ] [89 ] [33 +cookbook/figures/heatrefraction200.png> ] [33 pdfTeX warning (ext4): destination with the same identifier (name{figure.3.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13275,49 +13417,42 @@ \__shipout_drop_firstpage_... l.112 \chapter {Complex Geometries} ])) [39 ]> ] [34] +ayavi2n2.png [90 ] [34] Chapter 4. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple04.texg++ -o debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE_System_3D.cpp - +mple04.tex> ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/execute -.tex [40]g++ -o debian/tmp3/posix/dudley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_PDE.cpp - [36 +[35] [36 pdfTeX warning (ext4): destination with the same identifier (name{figure.4.1}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.139 \begin{python} ] -Chapter 2. -[41] [42] [37] [38 +osix/doc/cookbook/figures/pycadrec.pdf>]>] [37))] +[91 ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.194 \clearpage ] [47] [48] [49 ] [50] [51] -[52] [53]>] [54] +/doc/cookbook/figures/simplemesh.png> ] [92 ] +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t +ex +Chapter 5. +[93]>] [94] [95 ] Underfull \hbox (badness 10000) in paragraph at lines 197--202 [39] [40 @@ -13327,37 +13462,13 @@ \__shipout_drop_firstpage_... l.276 \clearpage + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - -[56]>]) +/doc/cookbook/figures/simpleheat.png [96 ] [97 ]>]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple05.tex [57] [58] +mple05.tex [98 ] [99] [100] [101] [102] Underfull \hbox (badness 10000) in paragraph at lines 18--25 [41 @@ -13367,92 +13478,24 @@ \__shipout_drop_firstpage_... l.74 l30= Line(p3, p0) ] [89 ] [90 ])) -[91 ] [92 ] -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/pycad.t -ex -Chapter 5. -[93] [94] [95 ] [96 ] [97 ] [98 ] [99] [100]> [101]] [102] [103] [104]) [105] +posix/doc/cookbook/figures/anticlineheatrefraction.png [103] [104]) [105] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/Models. tex [106] Chapter 6. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/stokess -olver.tex -Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 -\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for - the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th -e [] -[42] [107] [43 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.5}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.134 \clearpage - ) +olver.tex [107] [108] [109] [110] [111]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/darcyfl -ux.tex] [112] [113] [114 ]) [115] [116] -Underfull \hbox (badness 10000) in paragraph at lines 137--142 - -[44] [45 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.6}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.199 \clearpage - ]) [115] [116] [117] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/faultsy stem.tex [118 ] [119] [120] [121])) [122] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/finley. -tex +texg++ -o debian/tmp3/posix/dudley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/IndexList.cpp + Chapter 7. -[123>] ] [125 ] [130]) [131] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ripley. -tex [132]> ]) [135] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/speckle -y.tex [136]> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + [141]) [142] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/trilino -s.tex -Chapter 11. -[143>]] [144] [145] [146] [147] -Underfull \hbox (badness 10000) in paragraph at lines 202--209 - +s.tex/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ -Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 -[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ -]. To show sub-domains, we need to go back to [] -[46] [47 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.7}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.291 \clearpage - ] +c.tex Chapter 12. Underfull \vbox (badness 10000) has occurred while \output is active [153] -Underfull \hbox (badness 10000) in paragraph at lines 294--299 - -[48 -pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.305 \clearpage - > +ript-5.6/debian/tmp3/posix/doc/user/figures//MidRotAniso.pngg++ -o debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_distributeByRankOfDOF.cpp +> ] [157] -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - - -Underfull \hbox (badness 10000) in paragraph at lines 154--155 - -[50]) [158] +//diffaniso.png>] [157]) [158] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/subworl ds.tex Chapter 13. -[159] [51] -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - - -Underfull \hbox (badness 10000) in paragraph at lines 279--280 - -[52 -pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.280 - [163]] [164] +.tex [163] [164] Appendix B. -[165] [166] [167] [53]) [54 -pdfTeX warning (ext4): destination with the same identifier (name{figure.5.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.122 \chapter - {Seismic Wave Propagation} ] [168 -Chapter 6. - -(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple08.tex] [169] [170] [171]) +[165] [166] [167] [168] [169] [170] [171]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/complet -edevs.tex -Underfull \hbox (badness 10000) in paragraph at lines 18--24 - -[55 [172]] +edevs.tex [172] Appendix C. ) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/ourrefs @@ -13614,46 +13617,15 @@ Appendix D. (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang1.sty) (/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang2.sty) -(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) -Underfull \hbox (badness 10000) in paragraph at lines 139--145 - -[56 -pdfTeX warning (ext4): destination with the same identifier (name{table.6.1}) h -as been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.156 # - set initial values for first two time steps with source terms] [175]) +(/usr/share/texlive/texmf-dist/tex/latex/listings/lstlang3.sty) [175]) (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/py3.tex [176] Appendix E. -)) [177] [178 [57] +)) [177] [178] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.in -d] -[58 -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.214 \clearpage - < -/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu -res/ex08pw650.png (PNG copy)> ] [179] [180] [181]) [182 -Underfull \hbox (badness 10000) in paragraph at lines 218--223 - -[59] +d [179] [180] [181]) [182] (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/user/user.bb -l -pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2}) -has been already used, duplicate ignored - ...shipout:D \box_use:N \l_shipout_box - \__shipout_drop_firstpage_... -l.273 t= - t+h; n=n+1 ><>/usr/share/texlive/texmf-dist/fonts/type1/ urw/courier/ucrr8a.pfb>< +crro8a.pfb>]< /usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb> -Output written on user.pdf (184 pages, 2673056 bytes). +Output written on user.pdf (184 pages, 2673115 bytes). Transcript written on user.log. - [60]Install file: "debian/tmp3/posix/doc/user/user.pdf" as "debian/stage3/release/doc/user/user.pdf" - [61 +Install file: "debian/tmp3/posix/doc/user/user.pdf" as "debian/stage3/release/doc/user/user.pdf" + +Overfull \hbox (24.65349pt too wide) in paragraph at lines 85--88 +\OT1/ptm/m/n/10 This re-verse spline op-tion un-for-tu-nately does not work for + the [][]\OT1/pcr/m/n/10 getLoopCoords []\OT1/ptm/m/n/10 com-mand, how-ever, th +e [] +[42] [43 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.5}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.134 \clearpage + ] +Underfull \hbox (badness 10000) in paragraph at lines 137--142 + +[44] [45 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.6}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.199 \clearpage + + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +>/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +] +Underfull \hbox (badness 10000) in paragraph at lines 202--209 + + +Overfull \hbox (7.5533pt too wide) in paragraph at lines 210--216 +[]\OT1/ptm/m/n/10 Contours have al-ready been dis-cussed in Sec-tion [][]3.3[][ +]. To show sub-domains, we need to go back to [] +[46] [47 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.7}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.291 \clearpage + ] +Underfull \hbox (badness 10000) in paragraph at lines 294--299 + +[48 +pdfTeX warning (ext4): destination with the same identifier (name{figure.4.8}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.305 \clearpage + + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFDistribution.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from debian/stage3/include/dudley/Dudley.h:31, + from debian/stage3/include/dudley/DudleyDomain.h:51, + from dudley/src/DudleyDomain.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +>]) +Chapter 5. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple07.tex [49] +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + + +Underfull \hbox (badness 10000) in paragraph at lines 154--155 + +[50] [51] +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + + +Underfull \hbox (badness 10000) in paragraph at lines 279--280 + +[52 +pdfTeX warning (ext4): destination with the same identifier (name{figure.5.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.280 + ] [53]) [54 +pdfTeX warning (ext4): destination with the same identifier (name{figure.5.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.122 \chapter + {Seismic Wave Propagation} ] +Chapter 6. + +(/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa +mple08.tex +Underfull \hbox (badness 10000) in paragraph at lines 18--24 + +[55] +Underfull \hbox (badness 10000) in paragraph at lines 139--145 + +[56 +pdfTeX warning (ext4): destination with the same identifier (name{table.6.1}) h +as been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.156 # + set initial values for first two time steps with source terms] [57] +[58 +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.1}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.214 \clearpage + < +/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/figu +res/ex08pw650.png (PNG copy)> ] +Underfull \hbox (badness 10000) in paragraph at lines 218--223 + +[59 +pdfTeX warning (ext4): destination with the same identifier (name{figure.6.2}) +has been already used, duplicate ignored + ...shipout:D \box_use:N \l_shipout_box + \__shipout_drop_firstpage_... +l.273 t= + t+h; n=n+1 + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +>/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +] [60] [61 pdfTeX warning (ext4): destination with the same identifier (name{figure.6.3}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.392 \clearpage ] [62 +/doc/cookbook/figures/ex08babc.png>] [62 pdfTeX warning (ext4): destination with the same identifier (name{figure.6.4}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box @@ -13749,7 +13972,30 @@ n-escript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex08sw320.png (PNG copy)> ] +ian/tmp3/posix/doc/cookbook/figures/ex08sw880.png (PNG copy)>]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from dudley/src/Dudley.h:31, + from dudley/src/Assemble.h:27, + from dudley/src/Assemble_PDE_System_3D.cpp:41: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ + Underfull \hbox (badness 10000) in paragraph at lines 395--399 ) [63 @@ -13767,7 +14013,10 @@ \__shipout_drop_firstpage_... l.125 \chapter {3D Seismic Wave Propagation} ] +cript-5.6/debian/tmp3/posix/doc/cookbook/figures/ex08c2601.png (PNG copy)>]/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ + Chapter 7. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa @@ -13785,33 +14034,7 @@ \__shipout_drop_firstpage_... l.186 \clearpage ]In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_integrate.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ - +/doc/cookbook/figures/gmsh-example09lc.png (PNG copy)>] Underfull \hbox (badness 10000) in paragraph at lines 202--209 @@ -13856,7 +14079,33 @@ \__shipout_drop_firstpage_... l.177 \clearpage + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +> ] Underfull \hbox (badness 10000) in paragraph at lines 180--184 @@ -13918,8 +14167,7 @@ Chapter 9. (/build/reproducible-path/python-escript-5.6/debian/tmp3/posix/doc/cookbook/exa -mple11.texg++ -o debian/tmp3/posix/dudley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ElementFile_jacobians.cpp - +mple11.tex Underfull \hbox (badness 10000) in paragraph at lines 61--62 @@ -14112,194 +14360,7 @@ /texmf-dist/fonts/type1/urw/helvetic/uhvro8a.pfb> -Output written on cookbook.pdf (89 pages, 4412961 bytes). -Transcript written on cookbook.log. -Install file: "debian/tmp3/posix/doc/cookbook/cookbook.pdf" as "debian/stage3/release/doc/cookbook/cookbook.pdf" -g++ -o debian/tmp3/posix/dudley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/IndexList.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_interpolate.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_LumpedSystem.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE_System_2D.cpp:41: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE_System_3D.cpp:41: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_PDE.cpp:48: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Assemble.h:27, - from dudley/src/Assemble_NodeCoordinates.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from debian/stage3/include/dudley/DudleyDomain.h:51, - from dudley/src/DudleyDomain.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, +.pfb>In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, @@ -14322,11 +14383,13 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ + +Output written on cookbook.pdf (89 pages, 4413117 bytes). +Transcript written on cookbook.log. /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_distributeByRankOfDOF.cpp -g++ -o debian/tmp3/posix/dudley/src/Mesh_getPattern.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_getPattern.cpp +Install file: "debian/tmp3/posix/doc/cookbook/cookbook.pdf" as "debian/stage3/release/doc/cookbook/cookbook.pdf" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14346,17 +14409,14 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/ElementFile.h:21, - from dudley/src/ElementFile_createColoring.cpp:18: + from dudley/src/ElementFile_distributeByRankOfDOF.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFDistribution.cpp g++ -o debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_optimizeDOFLabeling.cpp -g++ -o debian/tmp3/posix/dudley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_read.cpp -g++ -o debian/tmp3/posix/dudley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_readGmsh.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14376,13 +14436,17 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/ElementFile.h:21, - from dudley/src/ElementFile_distributeByRankOfDOF.cpp:18: + from dudley/src/ElementFile_jacobians.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_read.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_readGmsh.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_readGmsh.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_resolveNodeIds.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_tet4.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tet4.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14409,9 +14473,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_resolveNodeIds.cpp -g++ -o debian/tmp3/posix/dudley/src/Mesh_tet4.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tet4.cpp -g++ -o debian/tmp3/posix/dudley/src/Mesh_tri3.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tri3.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14429,16 +14490,16 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/ElementFile.h:21, - from dudley/src/ElementFile_jacobians.cpp:18: + from debian/stage3/include/dudley/Dudley.h:31, + from dudley/src/DudleyDomain.h:51, + from dudley/src/Mesh_getPattern.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_write.cpp +g++ -o debian/tmp3/posix/dudley/src/Mesh_tri3.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_tri3.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14465,8 +14526,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Mesh_write.cpp g++ -o debian/tmp3/posix/dudley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile.cpp -g++ -o debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createDenseLabelings.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14486,14 +14547,18 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_getPattern.cpp:18: + from dudley/src/Mesh_optimizeDOFDistribution.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createDenseLabelings.cpp g++ -o debian/tmp3/posix/dudley/src/NodeFile_createMappings.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createMappings.cpp +g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createTrilinosGraph.cpp +g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_gather.cpp +g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ShapeTable.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14539,15 +14604,13 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_optimizeDOFDistribution.cpp:18: + from dudley/src/Mesh_tet4.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_createTrilinosGraph.cpp -g++ -o debian/tmp3/posix/dudley/src/NodeFile_gather.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/NodeFile_gather.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14567,14 +14630,13 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_resolveNodeIds.cpp:18: + from dudley/src/Mesh_read.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/ShapeTable.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/ShapeTable.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14594,13 +14656,14 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_read.cpp:18: + from dudley/src/Mesh_readGmsh.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Util.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Util.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14620,7 +14683,7 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_tri3.cpp:18: + from dudley/src/Mesh_resolveNodeIds.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -14646,13 +14709,15 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_readGmsh.cpp:18: + from dudley/src/Mesh_tri3.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_gradient.cpp +g++ -o debian/tmp3/posix/dudley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_jacobians.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14672,14 +14737,13 @@ from debian/stage3/include/escript/Data.h:24, from debian/stage3/include/dudley/Dudley.h:31, from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_tet4.cpp:18: + from dudley/src/Mesh_write.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Util.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Util.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14697,17 +14761,15 @@ from debian/stage3/include/escript/DataVector.h:24, from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, - from debian/stage3/include/dudley/Dudley.h:31, - from dudley/src/DudleyDomain.h:51, - from dudley/src/Mesh_write.cpp:18: + from dudley/src/Dudley.h:31, + from dudley/src/NodeFile.h:21, + from dudley/src/NodeFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/dudley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_gradient.cpp -g++ -o debian/tmp3/posix/dudley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -funroll-loops -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse dudley/src/Assemble_jacobians.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14734,6 +14796,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/BiCGStab.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/BiCGStab.cpp +g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Coupler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14753,14 +14817,15 @@ from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile.cpp:18: + from dudley/src/NodeFile_createMappings.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/BiCGStab.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/BiCGStab.cpp +g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FCT_Solver.cpp +g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FluxLimiter.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14779,17 +14844,11 @@ from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, - from dudley/src/NodeFile.h:21, - from dudley/src/NodeFile_createMappings.cpp:25: + from dudley/src/ShapeTable.h:27, + from dudley/src/ShapeTable.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Coupler.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Coupler.cpp -g++ -o debian/tmp3/posix/paso/src/FCT_Solver.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FCT_Solver.cpp -g++ -o debian/tmp3/posix/paso/src/FluxLimiter.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/FluxLimiter.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14816,6 +14875,11 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/Functions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Functions.cpp +g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14834,20 +14898,20 @@ from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, from dudley/src/Dudley.h:31, - from dudley/src/ShapeTable.h:27, - from dudley/src/ShapeTable.cpp:17: + from dudley/src/Util.h:23, + from dudley/src/Util.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Functions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Functions.cpp -g++ -o debian/tmp3/posix/paso/src/GMRES.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES.cpp g++ -o debian/tmp3/posix/paso/src/GMRES2.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/GMRES2.cpp g++ -o debian/tmp3/posix/paso/src/MKL.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MKL.cpp g++ -o debian/tmp3/posix/paso/src/MUMPS.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MUMPS.cpp g++ -o debian/tmp3/posix/paso/src/NewtonGMRES.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/NewtonGMRES.cpp +g++ -o debian/tmp3/posix/paso/src/Options.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Options.cpp +g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PCG.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14874,24 +14938,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, - from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/BiCGStab.cpp:22: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Options.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Options.cpp +g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PasoUtil.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14918,7 +14965,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/PCG.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PCG.cpp +g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14926,26 +14973,17 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from dudley/src/Dudley.h:31, - from dudley/src/Util.h:23, - from dudley/src/Util.cpp:18: + from debian/stage3/include/escript/EsysMPI.h:28, + from paso/src/Paso.h:36, + from paso/src/Solver.h:22, + from paso/src/BiCGStab.cpp:22: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/PasoUtil.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/PasoUtil.cpp +g++ -o debian/tmp3/posix/paso/src/Pattern_mis.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_mis.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14964,8 +15002,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Pattern.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern.cpp -g++ -o debian/tmp3/posix/paso/src/Pattern_mis.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_mis.cpp +g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_reduceBandwidth.cpp +g++ -o debian/tmp3/posix/paso/src/Preconditioner.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Preconditioner.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -14975,14 +15013,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/GMRES.cpp:62: + from paso/src/Transport.h:24, + from paso/src/FluxLimiter.h:21, + from paso/src/FluxLimiter.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/ReactiveSolver.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ReactiveSolver.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15000,10 +15040,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Pattern_reduceBandwidth.cpp -g++ -o debian/tmp3/posix/paso/src/Preconditioner.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Preconditioner.cpp -g++ -o debian/tmp3/posix/paso/src/ReactiveSolver.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ReactiveSolver.cpp g++ -o debian/tmp3/posix/paso/src/SchurComplement.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SchurComplement.cpp +g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Smoother.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15013,16 +15051,18 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/FluxLimiter.h:21, - from paso/src/FluxLimiter.cpp:28: + from paso/src/Solver.h:22, + from paso/src/GMRES.cpp:62: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Smoother.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Smoother.cpp +g++ -o debian/tmp3/posix/paso/src/Solver.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver.cpp +g++ -o debian/tmp3/posix/paso/src/Solver_Function.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver_Function.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_getSubmatrix.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15032,18 +15072,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/NewtonGMRES.cpp:34: + from paso/src/Solver.h:22, + from paso/src/GMRES2.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/Solver.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver.cpp -g++ -o debian/tmp3/posix/paso/src/Solver_Function.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Solver_Function.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_getSubmatrix.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_nullifyRowsAndCols.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15053,8 +15089,7 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/GMRES2.cpp:17: + from paso/src/NewtonGMRES.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15078,7 +15113,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_nullifyRowsAndCols.cpp g++ -o debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_saveHB.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrix.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15088,14 +15125,18 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Functions.h:22, - from paso/src/Solver_Function.cpp:17: + from paso/src/Preconditioner.h:21, + from paso/src/Preconditioner.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrixTranspose.cpp +g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixVector.cpp +g++ -o debian/tmp3/posix/paso/src/SystemMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix.cpp +g++ -o debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_MatrixVector.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15105,14 +15146,17 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/SchurComplement.cpp:21: + from paso/src/Transport.h:24, + from paso/src/ReactiveSolver.h:22, + from paso/src/ReactiveSolver.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrix.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp +g++ -o debian/tmp3/posix/paso/src/SystemMatrix_debug.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_debug.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15122,20 +15166,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/ReactiveSolver.h:22, - from paso/src/ReactiveSolver.cpp:34: + from paso/src/SchurComplement.cpp:21: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixMatrixTranspose.cpp -g++ -o debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SparseMatrix_MatrixVector.cpp -g++ -o debian/tmp3/posix/paso/src/SystemMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix.cpp -g++ -o debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_MatrixVector.cpp -g++ -o debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp +g++ -o debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_extendedRows.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15145,15 +15183,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Preconditioner.h:21, - from paso/src/Preconditioner.cpp:28: + from paso/src/Functions.h:22, + from paso/src/Solver_Function.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SystemMatrix_debug.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_debug.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15163,8 +15200,9 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Solver.h:22, - from paso/src/Solver.cpp:28: + from paso/src/Pattern.h:32, + from paso/src/SparseMatrix.h:32, + from paso/src/SparseMatrix.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15180,17 +15218,11 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Pattern.h:32, - from paso/src/SparseMatrix.h:32, - from paso/src/SparseMatrix.cpp:28: + from paso/src/Solver.h:22, + from paso/src/Solver.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_extendedRows.cpp -g++ -o debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_loadMM.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15208,12 +15240,17 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_loadMM.cpp g++ -o debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrix_mergeMainAndCouple.cpp g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrixPattern.cpp g++ -o debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/SystemMatrixPattern_unrollBlocks.cpp g++ -o debian/tmp3/posix/paso/src/Transport.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Transport.cpp g++ -o debian/tmp3/posix/paso/src/Transport_solve.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/Transport_solve.cpp g++ -o debian/tmp3/posix/paso/src/ILU.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/ILU.cpp +g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MINRES.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15226,14 +15263,13 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_debug.cpp:28: + from paso/src/SystemMatrix_MatrixVector.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/MINRES.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/MINRES.cpp g++ -o debian/tmp3/posix/paso/src/RILU.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/RILU.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -15247,7 +15283,7 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp:33: + from paso/src/SystemMatrix.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15255,7 +15291,6 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/paso/src/TFQMR.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/TFQMR.cpp -g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/UMFPACK.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15268,13 +15303,14 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_extendedRows.cpp:34: + from paso/src/SystemMatrix_copyRemoteCoupleBlock.cpp:33: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/UMFPACK.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/UMFPACK.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15287,13 +15323,14 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_MatrixVector.cpp:29: + from paso/src/SystemMatrix_extendedRows.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/mmio.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15306,14 +15343,13 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix.cpp:28: + from paso/src/SystemMatrix_debug.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/mmio.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/mmio.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15326,13 +15362,16 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_mergeMainAndCouple.cpp:36: + from paso/src/SystemMatrix_loadMM.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/performance.cpp +g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/solve.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractContinuousDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15345,15 +15384,18 @@ from paso/src/Pattern.h:32, from paso/src/SparseMatrix.h:32, from paso/src/SystemMatrix.h:33, - from paso/src/SystemMatrix_loadMM.cpp:29: + from paso/src/SystemMatrix_mergeMainAndCouple.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/performance.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/performance.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/paso/src/solve.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse paso/src/solve.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractDomain.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractReducer.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractReducer.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractSystemMatrix.cpp +g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractTransportProblem.cpp +g++ -o debian/tmp3/posix/escriptcore/src/ArrayOps.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ArrayOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15371,10 +15413,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractContinuousDomain.cpp -g++ -o debian/tmp3/posix/escriptcore/src/AbstractDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractDomain.cpp -g++ -o debian/tmp3/posix/escriptcore/src/AbstractReducer.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractReducer.cpp -g++ -o debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractSystemMatrix.cpp +g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/BinaryDataReadyOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15384,7 +15423,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/ILU.cpp:29: + from paso/src/Transport.h:24, + from paso/src/Transport.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15400,16 +15440,14 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from paso/src/Paso.h:36, - from paso/src/Transport.h:24, - from paso/src/Transport.cpp:28: + from paso/src/ILU.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/AbstractTransportProblem.cpp -g++ -o debian/tmp3/posix/escriptcore/src/ArrayOps.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ArrayOps.cpp +g++ -o debian/tmp3/posix/escriptcore/src/Data.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Data.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15426,8 +15464,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/BinaryDataReadyOps.cpp -g++ -o debian/tmp3/posix/escriptcore/src/Data.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Data.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15445,8 +15481,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataAbstract.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataConstant.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15464,6 +15498,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataAbstract.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataAbstract.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15480,8 +15515,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataEmpty.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataEmpty.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataExpanded.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataExpanded.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15489,9 +15522,18 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/AbstractDomain.cpp:18: + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from escriptcore/src/AbstractReducer.h:21, + from escriptcore/src/AbstractReducer.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15512,9 +15554,15 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataConstant.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataConstant.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataEmpty.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataEmpty.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataExpanded.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataExpanded.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataFactory.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataLazy.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataLazy.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataReady.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15524,34 +15572,7 @@ from /usr/include/boost/shared_ptr.hpp:17, from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/FunctionSpace.h:24, - from escriptcore/src/AbstractTransportProblem.h:22, - from escriptcore/src/AbstractTransportProblem.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from escriptcore/src/AbstractReducer.h:21, - from escriptcore/src/AbstractReducer.cpp:17: + from escriptcore/src/AbstractDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15576,8 +15597,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataFactory.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataFactory.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataLazy.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataLazy.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15604,9 +15623,28 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataReady.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataReady.cpp g++ -o debian/tmp3/posix/escriptcore/src/DataTagged.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTagged.cpp g++ -o debian/tmp3/posix/escriptcore/src/DataTypes.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataTypes.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVector.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/FunctionSpace.h:24, + from escriptcore/src/AbstractTransportProblem.h:22, + from escriptcore/src/AbstractTransportProblem.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorAlt.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorAlt.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15631,6 +15669,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorOps.cpp +g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorTaipan.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15647,17 +15687,13 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataReady.h:23, - from escriptcore/src/DataConstant.h:23, - from escriptcore/src/DataConstant.cpp:18: + from escriptcore/src/DataAbstract.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataVector.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVector.cpp -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorAlt.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorAlt.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15674,15 +15710,15 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/Data.h:24, - from escriptcore/src/DataExpanded.cpp:18: + from escriptcore/src/DataReady.h:23, + from escriptcore/src/DataConstant.h:23, + from escriptcore/src/DataConstant.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorOps.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorOps.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15690,23 +15726,16 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from escriptcore/src/WrappedArray.h:25, - from escriptcore/src/DataVectorAlt.h:26, - from escriptcore/src/DataVector.h:24, - from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataAbstract.cpp:18: + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/DataFactory.h:24, + from escriptcore/src/DataFactory.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/DataVectorTaipan.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15732,6 +15761,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/EscriptParams.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EscriptParams.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15753,12 +15783,10 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EsysMPI.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/EscriptParams.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EscriptParams.cpp -g++ -o debian/tmp3/posix/escriptcore/src/EsysMPI.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/EsysMPI.cpp -g++ -o debian/tmp3/posix/escriptcore/src/ES_optype.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ES_optype.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15766,10 +15794,17 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/DataFactory.h:24, - from escriptcore/src/DataFactory.cpp:18: + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/extract.hpp:16, + from escriptcore/src/WrappedArray.h:25, + from escriptcore/src/DataVectorAlt.h:26, + from escriptcore/src/DataVector.h:24, + from escriptcore/src/DataAbstract.h:23, + from escriptcore/src/Data.h:24, + from escriptcore/src/DataExpanded.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15800,6 +15835,13 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/ES_optype.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ES_optype.cpp +g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ExceptionTranslators.cpp +g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpace.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpace.cpp +g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpaceFactory.cpp +g++ -o debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/LapackInverseHelper.cpp +g++ -o debian/tmp3/posix/escriptcore/src/MPIDataReducer.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIDataReducer.cpp +g++ -o debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIScalarReducer.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15815,17 +15857,13 @@ from escriptcore/src/WrappedArray.h:25, from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, - from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/Data.h:24, - from escriptcore/src/DataTagged.cpp:18: + from escriptcore/src/DataVector.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/ExceptionTranslators.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpace.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpace.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15841,17 +15879,15 @@ from escriptcore/src/WrappedArray.h:25, from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, - from escriptcore/src/DataVector.cpp:18: + from escriptcore/src/DataAbstract.h:23, + from escriptcore/src/DataVectorOps.h:21, + from escriptcore/src/DataVectorOps.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/FunctionSpaceFactory.cpp -g++ -o debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/LapackInverseHelper.cpp -g++ -o debian/tmp3/posix/escriptcore/src/MPIDataReducer.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIDataReducer.cpp -g++ -o debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/MPIScalarReducer.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15868,15 +15904,11 @@ from escriptcore/src/DataVectorAlt.h:26, from escriptcore/src/DataVector.h:24, from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/DataVectorOps.h:21, - from escriptcore/src/DataVectorOps.cpp:18: + from escriptcore/src/Data.h:24, + from escriptcore/src/DataTagged.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/NCHelper.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NCHelper.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15899,10 +15931,16 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/NCHelper.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NCHelper.cpp g++ -o debian/tmp3/posix/escriptcore/src/NonReducedVariable.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NonReducedVariable.cpp g++ -o debian/tmp3/posix/escriptcore/src/NullDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/NullDomain.cpp g++ -o debian/tmp3/posix/escriptcore/src/pyerr.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/pyerr.cpp g++ -o debian/tmp3/posix/escriptcore/src/Random.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Random.cpp +g++ -o debian/tmp3/posix/escriptcore/src/SolverOptions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SolverOptions.cpp +g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SplitWorld.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15920,27 +15958,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/SolverOptions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SolverOptions.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/FunctionSpace.h:24, - from escriptcore/src/FunctionSpace.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/SplitWorld.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SplitWorld.cpp -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SubWorld.cpp -g++ -o debian/tmp3/posix/escriptcore/src/Taipan.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Taipan.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -15959,8 +15976,8 @@ from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, from escriptcore/src/AbstractReducer.h:21, - from escriptcore/src/MPIScalarReducer.h:20, - from escriptcore/src/MPIScalarReducer.cpp:17: + from escriptcore/src/MPIDataReducer.h:20, + from escriptcore/src/MPIDataReducer.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -15974,28 +15991,16 @@ from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, - from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, - from /usr/include/boost/python/converter/arg_to_python.hpp:15, - from /usr/include/boost/python/call.hpp:15, - from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from escriptcore/src/AbstractReducer.h:21, - from escriptcore/src/MPIDataReducer.h:20, - from escriptcore/src/MPIDataReducer.cpp:17: + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/FunctionSpace.h:24, + from escriptcore/src/FunctionSpace.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/TestDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/TestDomain.cpp -g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Utils.cpp -g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/WrappedArray.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16014,48 +16019,18 @@ from debian/stage3/include/escript/DataAbstract.h:23, from debian/stage3/include/escript/Data.h:24, from escriptcore/src/AbstractReducer.h:21, - from escriptcore/src/NonReducedVariable.h:20, - from escriptcore/src/NonReducedVariable.cpp:17: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/NullDomain.h:22, - from escriptcore/src/NullDomain.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from escriptcore/src/EsysMPI.h:28, - from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/SubWorld.h:21, - from escriptcore/src/SubWorld.cpp:18: + from escriptcore/src/MPIScalarReducer.h:20, + from escriptcore/src/MPIScalarReducer.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/SubWorld.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/SubWorld.cpp +g++ -o debian/tmp3/posix/escriptcore/src/Taipan.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Taipan.cpp +g++ -o debian/tmp3/posix/escriptcore/src/TestDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/TestDomain.cpp +g++ -o debian/tmp3/posix/escriptcore/src/Utils.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/Utils.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16067,112 +16042,166 @@ from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, - from /usr/include/boost/python/object.hpp:9, - from /usr/include/boost/python/dict.hpp:10, - from escriptcore/src/SolverOptions.h:21, - from escriptcore/src/SolverOptions.cpp:18: + from /usr/include/boost/python/extract.hpp:16, + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from escriptcore/src/AbstractReducer.h:21, + from escriptcore/src/NonReducedVariable.h:20, + from escriptcore/src/NonReducedVariable.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/WrappedArray.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/WrappedArray.cpp /usr/bin/python3 scripts/py_comp.py dudley/py_src/factorywrappers.py debian/tmp3/posix/dudley/py/factorywrappers.pyc Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" /usr/bin/python3 scripts/py_comp.py dudley/py_src/readers.py debian/tmp3/posix/dudley/py/readers.pyc -/usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/__init__.py debian/tmp3/posix/escript/__init__.pyc Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/datamanager.py debian/tmp3/posix/escript/datamanager.pyc Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/linearPDEs.py debian/tmp3/posix/escript/linearPDEs.pyc Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/modelframe.py debian/tmp3/posix/escript/modelframe.pyc Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/pdetools.py debian/tmp3/posix/escript/pdetools.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/models.py debian/tmp3/posix/escript/models.pyc Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/splitworld.py debian/tmp3/posix/escript/splitworld.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/pdetools.py debian/tmp3/posix/escript/pdetools.pyc Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" -/usr/bin/python3 scripts/py_comp.py escript/py_src/symbolic.py debian/tmp3/posix/escript/symbolic.pyc +/usr/bin/python3 scripts/py_comp.py escript/py_src/splitworld.py debian/tmp3/posix/escript/splitworld.pyc Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" +/usr/bin/python3 scripts/py_comp.py escript/py_src/symbolic.py debian/tmp3/posix/escript/symbolic.pyc +Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" /usr/bin/python3 scripts/py_comp.py escript/py_src/unitsSI.py debian/tmp3/posix/escript/unitsSI.pyc +Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" /usr/bin/python3 scripts/py_comp.py escript/py_src/util.py debian/tmp3/posix/escript/util.pyc -Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" +Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/__init__.py debian/tmp3/posix/escriptcore/py/__init__.pyc -Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/benchmark.py debian/tmp3/posix/escriptcore/py/benchmark.pyc +Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/datamanager.py debian/tmp3/posix/escriptcore/py/datamanager.pyc -Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/domainCouplers.py debian/tmp3/posix/escriptcore/py/domainCouplers.pyc -Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" -g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/escriptcpp.cpp Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" +g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse escriptcore/src/escriptcpp.cpp /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/faultsystems.py debian/tmp3/posix/escriptcore/py/faultsystems.pyc +Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/flows.py debian/tmp3/posix/escriptcore/py/flows.pyc +Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/gmshrunner.py debian/tmp3/posix/escriptcore/py/gmshrunner.pyc -Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/heat.py debian/tmp3/posix/escriptcore/py/heat.pyc +Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/levelset.py debian/tmp3/posix/escriptcore/py/levelset.pyc -Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/linearPDEs.py debian/tmp3/posix/escriptcore/py/linearPDEs.pyc -Install file: "debian/tmp3/posix/escriptcore/py/heat.pyc" as "debian/stage3/esys/escriptcore/heat.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/modelframe.py debian/tmp3/posix/escriptcore/py/modelframe.pyc -Install file: "debian/tmp3/posix/escriptcore/py/levelset.pyc" as "debian/stage3/esys/escriptcore/levelset.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/models.py debian/tmp3/posix/escriptcore/py/models.pyc -Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/mountains.py debian/tmp3/posix/escriptcore/py/mountains.pyc Install file: "debian/tmp3/posix/escriptcore/py/modelframe.pyc" as "debian/stage3/esys/escriptcore/modelframe.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/mountains.py debian/tmp3/posix/escriptcore/py/mountains.pyc +Install file: "debian/tmp3/posix/escriptcore/py/models.pyc" as "debian/stage3/esys/escriptcore/models.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/nonlinearPDE.py debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc -Install file: "debian/tmp3/posix/escriptcore/py/linearPDEs.pyc" as "debian/stage3/esys/escriptcore/linearPDEs.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/pdetools.py debian/tmp3/posix/escriptcore/py/pdetools.pyc Install file: "debian/tmp3/posix/escriptcore/py/mountains.pyc" as "debian/stage3/esys/escriptcore/mountains.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/rheologies.py debian/tmp3/posix/escriptcore/py/rheologies.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/pdetools.py debian/tmp3/posix/escriptcore/py/pdetools.pyc Install file: "debian/tmp3/posix/escriptcore/py/nonlinearPDE.pyc" as "debian/stage3/esys/escriptcore/nonlinearPDE.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/rheologies.py debian/tmp3/posix/escriptcore/py/rheologies.pyc Install file: "debian/tmp3/posix/escriptcore/py/pdetools.pyc" as "debian/stage3/esys/escriptcore/pdetools.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/runmodel.py debian/tmp3/posix/escriptcore/py/runmodel.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc Install file: "debian/tmp3/posix/escriptcore/py/rheologies.pyc" as "debian/stage3/esys/escriptcore/rheologies.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/splitworld.py debian/tmp3/posix/escriptcore/py/splitworld.pyc Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/start.py debian/tmp3/posix/escriptcore/py/start.pyc Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/evaluator.py debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/__init__.py debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/evaluator.py debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/functions.py debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/pretty.py debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symbol.py debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/NullDomain.h:22, + from escriptcore/src/NullDomain.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/symconstants.py debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/utils.py debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/testing.py debian/tmp3/posix/escriptcore/py/testing.pyc +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" -/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/unitsSI.py debian/tmp3/posix/escriptcore/py/unitsSI.pyc +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/symbolic/utils.py debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/testing.py debian/tmp3/posix/escriptcore/py/testing.pyc +Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/utils.pyc" as "debian/stage3/esys/escriptcore/symbolic/utils.pyc" +/usr/bin/python3 scripts/py_comp.py escriptcore/py_src/unitsSI.py debian/tmp3/posix/escriptcore/py/unitsSI.pyc /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/utestselect.py debian/tmp3/posix/escriptcore/py/utestselect.pyc +Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" /usr/bin/python3 scripts/py_comp.py escriptcore/py_src/util.py debian/tmp3/posix/escriptcore/py/util.pyc -Install file: "debian/tmp3/posix/escriptcore/py/testing.pyc" as "debian/stage3/esys/escriptcore/testing.pyc" -/usr/bin/python3 scripts/py_comp.py finley/py_src/__init__.py debian/tmp3/posix/finley/py/__init__.pyc Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" +/usr/bin/python3 scripts/py_comp.py finley/py_src/__init__.py debian/tmp3/posix/finley/py/__init__.pyc +Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" /usr/bin/python3 scripts/py_comp.py finley/py_src/factorywrappers.py debian/tmp3/posix/finley/py/factorywrappers.pyc -Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" -Install file: "finley/src/DomainFactory.h" as "debian/stage3/include/finley/DomainFactory.h" Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" -Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" +Install file: "finley/src/DomainFactory.h" as "debian/stage3/include/finley/DomainFactory.h" Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" Install file: "finley/src/Finley.h" as "debian/stage3/include/finley/Finley.h" Install file: "finley/src/FinleyDomain.h" as "debian/stage3/include/finley/FinleyDomain.h" Install file: "finley/src/FinleyException.h" as "debian/stage3/include/finley/FinleyException.h" -Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h" -g++ -o debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_LumpedSystem.cpp +Install file: "finley/src/system_dep.h" as "debian/stage3/include/finley/system_dep.h" +Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h" +Install file: "finley/src/NodeFile.h" as "debian/stage3/include/finley/NodeFile.h" +Install file: "finley/src/Util.h" as "debian/stage3/include/finley/Util.h" +Install file: "finley/src/ReferenceElementSets.h" as "debian/stage3/include/finley/ReferenceElementSets.h" +Install file: "finley/src/NodeMapping.h" as "debian/stage3/include/finley/NodeMapping.h" +Install file: "finley/src/ReferenceElements.h" as "debian/stage3/include/finley/ReferenceElements.h" g++ -o debian/tmp3/posix/finley/src/Assemble_AverageElementData.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_AverageElementData.cpp +Install file: "finley/src/Quadrature.h" as "debian/stage3/include/finley/Quadrature.h" +Install file: "finley/src/ShapeFunctions.h" as "debian/stage3/include/finley/ShapeFunctions.h" +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, + from /usr/include/boost/python/converter/arg_to_python.hpp:15, + from /usr/include/boost/python/call.hpp:15, + from /usr/include/boost/python/object_core.hpp:14, + from /usr/include/boost/python/object.hpp:9, + from /usr/include/boost/python/dict.hpp:10, + from escriptcore/src/SolverOptions.h:21, + from escriptcore/src/SolverOptions.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/finleycpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/finleycpp.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyElementData.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyNodalData.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16185,21 +16214,20 @@ from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/extract.hpp:16, - from escriptcore/src/WrappedArray.h:25, - from escriptcore/src/DataVectorAlt.h:26, - from escriptcore/src/DataVector.h:24, - from escriptcore/src/DataAbstract.h:23, - from escriptcore/src/Data.h:24, - from escriptcore/src/WrappedArray.cpp:18: + from debian/stage3/include/escript/WrappedArray.h:25, + from debian/stage3/include/escript/DataVectorAlt.h:26, + from debian/stage3/include/escript/DataVector.h:24, + from debian/stage3/include/escript/DataAbstract.h:23, + from debian/stage3/include/escript/Data.h:24, + from escriptcore/src/AbstractReducer.h:21, + from escriptcore/src/SplitWorld.h:21, + from escriptcore/src/SplitWorld.cpp:17: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_addToSystemMatrix.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_integrate.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_NodeCoordinates.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16209,9 +16237,8 @@ from /usr/include/boost/shared_ptr.hpp:17, from escriptcore/src/EsysMPI.h:28, from escriptcore/src/AbstractDomain.h:24, - from escriptcore/src/NullDomain.h:22, - from escriptcore/src/TestDomain.h:22, - from escriptcore/src/TestDomain.cpp:20: + from escriptcore/src/SubWorld.h:21, + from escriptcore/src/SubWorld.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16230,20 +16257,20 @@ from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/extract.hpp:16, - from debian/stage3/include/escript/WrappedArray.h:25, - from debian/stage3/include/escript/DataVectorAlt.h:26, - from debian/stage3/include/escript/DataVector.h:24, - from debian/stage3/include/escript/DataAbstract.h:23, - from debian/stage3/include/escript/Data.h:24, - from escriptcore/src/AbstractReducer.h:21, - from escriptcore/src/SplitWorld.h:21, - from escriptcore/src/SplitWorld.cpp:17: + from escriptcore/src/WrappedArray.h:25, + from escriptcore/src/DataVectorAlt.h:26, + from escriptcore/src/DataVector.h:24, + from escriptcore/src/DataAbstract.h:23, + from escriptcore/src/Data.h:24, + from escriptcore/src/WrappedArray.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_LumpedSystem.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_NodeCoordinates.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16268,11 +16295,25 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getAssembleParameters.cpp g++ -o debian/tmp3/posix/finley/src/Assemble_PDE.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_C.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getNormal.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Points.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from escriptcore/src/EsysMPI.h:28, + from escriptcore/src/AbstractDomain.h:24, + from escriptcore/src/NullDomain.h:22, + from escriptcore/src/TestDomain.h:22, + from escriptcore/src/TestDomain.cpp:20: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16290,6 +16331,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Points.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Points.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16300,7 +16342,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_addToSystemMatrix.cpp:18: + from finley/src/Assemble_AverageElementData.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16315,9 +16357,8 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/Assemble.h:27, - from finley/src/Assemble_getAssembleParameters.cpp:24: + from debian/stage3/include/finley/Finley.h:32, + from finley/src/finleycpp.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16334,14 +16375,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_integrate.cpp:25: + from finley/src/Assemble_CopyElementData.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_1D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16352,13 +16392,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_NodeCoordinates.cpp:25: + from finley/src/Assemble_CopyNodalData.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_1D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16369,13 +16410,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_AverageElementData.cpp:25: + from finley/src/Assemble_LumpedSystem.cpp:28: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_2D.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16386,13 +16429,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE.cpp:48: + from finley/src/Assemble_NodeCoordinates.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_C.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_1D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16403,13 +16448,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_LumpedSystem.cpp:28: + from finley/src/Assemble_PDE.cpp:48: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_2D.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16420,13 +16467,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_C.cpp:34: + from finley/src/Assemble_PDE_Points.cpp:36: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_C.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_addToSystemMatrix.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16437,20 +16486,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_getNormal.cpp:26: + from finley/src/Assemble_PDE_Single_2D.cpp:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getSize.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_1D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_gradient.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_2D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_Single_3D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_2D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_CopyElementData.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyElementData.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getAssembleParameters.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_getNormal.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getNormal.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16461,15 +16505,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Points.cpp:36: + from finley/src/Assemble_PDE_Single_C.cpp:34: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_3D.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_CopyNodalData.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16480,25 +16522,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_1D.cpp:42: + from finley/src/Assemble_PDE_Single_1D.cpp:39: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_PDE_System_C.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "finley/src/system_dep.h" as "debian/stage3/include/finley/system_dep.h" -Install file: "finley/src/ElementFile.h" as "debian/stage3/include/finley/ElementFile.h" -Install file: "finley/src/NodeFile.h" as "debian/stage3/include/finley/NodeFile.h" -Install file: "finley/src/Util.h" as "debian/stage3/include/finley/Util.h" -Install file: "finley/src/ReferenceElementSets.h" as "debian/stage3/include/finley/ReferenceElementSets.h" -Install file: "finley/src/NodeMapping.h" as "debian/stage3/include/finley/NodeMapping.h" -Install file: "finley/src/ReferenceElements.h" as "debian/stage3/include/finley/ReferenceElements.h" -Install file: "finley/src/Quadrature.h" as "debian/stage3/include/finley/Quadrature.h" -Install file: "finley/src/ShapeFunctions.h" as "debian/stage3/include/finley/ShapeFunctions.h" -g++ -o debian/tmp3/posix/finley/src/finleycpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/finleycpp.cpp -g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_interpolate.cpp +g++ -o debian/tmp3/posix/finley/src/Assemble_getSize.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_getSize.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16509,13 +16540,10 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_getSize.cpp:26: + from finley/src/Assemble_PDE_System_1D.cpp:42: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16526,7 +16554,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_gradient.cpp:26: + from finley/src/Assemble_PDE_Single_3D.cpp:38: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16543,13 +16571,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_1D.cpp:39: + from finley/src/Assemble_PDE_System_2D.cpp:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Assemble_gradient.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_gradient.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16560,13 +16592,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_3D.cpp:38: + from finley/src/Assemble_PDE_System_3D.cpp:41: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lnetcdf_c++4 -lpython3.11 -lboost_python311 -lboost_numpy311 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16577,13 +16610,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_Single_2D.cpp:38: + from finley/src/Assemble_addToSystemMatrix.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so" +g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/MUMPS.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 +Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so" +g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16594,13 +16631,19 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_2D.cpp:41: + from finley/src/Assemble_PDE_System_C.cpp:35: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "escriptcore/src/Utils.h" as "debian/stage3/include/escript/Utils.h" +g++ -o debian/tmp3/posix/finley/src/Assemble_integrate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_integrate.cpp +Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so" +g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 +Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so" +g++ -o debian/tmp3/posix/finley/src/Assemble_interpolate.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_interpolate.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16611,7 +16654,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_3D.cpp:41: + from finley/src/Assemble_getAssembleParameters.cpp:24: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16619,6 +16662,9 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/finley/src/Assemble_jacobians.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Assemble_jacobians.cpp +g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/DomainFactory.cpp +g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile.cpp +g++ -o debian/tmp3/posix/finley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile_jacobians.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16629,7 +16675,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_PDE_System_C.cpp:35: + from finley/src/Assemble_getNormal.cpp:26: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16646,14 +16692,15 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_CopyElementData.cpp:25: + from finley/src/Assemble_getSize.cpp:26: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/DomainFactory.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/DomainFactory.cpp +g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/FinleyDomain.cpp +g++ -o debian/tmp3/posix/finley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/IndexList.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16664,13 +16711,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/Assemble.h:27, - from finley/src/Assemble_CopyNodalData.cpp:18: + from finley/src/Assemble_gradient.cpp:26: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_addPoints.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_addPoints.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16688,6 +16736,11 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_findMatchingFaces.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getPasoPattern.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getTrilinosGraph.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_glueFaces.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_glueFaces.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex20.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16696,22 +16749,15 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/finleycpp.cpp:18: + from finley/src/Finley.h:32, + from finley/src/Assemble.h:27, + from finley/src/Assemble_integrate.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/ElementFile.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/escriptcore/src/libescript.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/AbstractContinuousDomain.os debian/tmp3/posix/escriptcore/src/AbstractDomain.os debian/tmp3/posix/escriptcore/src/AbstractReducer.os debian/tmp3/posix/escriptcore/src/AbstractSystemMatrix.os debian/tmp3/posix/escriptcore/src/AbstractTransportProblem.os debian/tmp3/posix/escriptcore/src/ArrayOps.os debian/tmp3/posix/escriptcore/src/BinaryDataReadyOps.os debian/tmp3/posix/escriptcore/src/Data.os debian/tmp3/posix/escriptcore/src/DataAbstract.os debian/tmp3/posix/escriptcore/src/DataConstant.os debian/tmp3/posix/escriptcore/src/DataEmpty.os debian/tmp3/posix/escriptcore/src/DataExpanded.os debian/tmp3/posix/escriptcore/src/DataFactory.os debian/tmp3/posix/escriptcore/src/DataLazy.os debian/tmp3/posix/escriptcore/src/DataReady.os debian/tmp3/posix/escriptcore/src/DataTagged.os debian/tmp3/posix/escriptcore/src/DataTypes.os debian/tmp3/posix/escriptcore/src/DataVector.os debian/tmp3/posix/escriptcore/src/DataVectorAlt.os debian/tmp3/posix/escriptcore/src/DataVectorOps.os debian/tmp3/posix/escriptcore/src/DataVectorTaipan.os debian/tmp3/posix/escriptcore/src/EscriptParams.os debian/tmp3/posix/escriptcore/src/EsysMPI.os debian/tmp3/posix/escriptcore/src/ES_optype.os debian/tmp3/posix/escriptcore/src/ExceptionTranslators.os debian/tmp3/posix/escriptcore/src/FunctionSpace.os debian/tmp3/posix/escriptcore/src/FunctionSpaceFactory.os debian/tmp3/posix/escriptcore/src/LapackInverseHelper.os debian/tmp3/posix/escriptcore/src/MPIDataReducer.os debian/tmp3/posix/escriptcore/src/MPIScalarReducer.os debian/tmp3/posix/escriptcore/src/NCHelper.os debian/tmp3/posix/escriptcore/src/NonReducedVariable.os debian/tmp3/posix/escriptcore/src/NullDomain.os debian/tmp3/posix/escriptcore/src/pyerr.os debian/tmp3/posix/escriptcore/src/Random.os debian/tmp3/posix/escriptcore/src/SolverOptions.os debian/tmp3/posix/escriptcore/src/SplitWorld.os debian/tmp3/posix/escriptcore/src/SubWorld.os debian/tmp3/posix/escriptcore/src/Taipan.os debian/tmp3/posix/escriptcore/src/TestDomain.os debian/tmp3/posix/escriptcore/src/Utils.os debian/tmp3/posix/escriptcore/src/WrappedArray.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lnetcdf_c++4 -lpython3.11 -lboost_python311 -lboost_numpy311 -g++ -o debian/tmp3/posix/finley/src/ElementFile_jacobians.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ElementFile_jacobians.cpp -g++ -o debian/tmp3/posix/finley/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/FinleyDomain.cpp -Install file: "debian/tmp3/posix/escriptcore/src/libescript.so" as "debian/stage3/lib/libescript.so" -g++ -o debian/tmp3/posix/paso/src/libpaso.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/paso/src/BiCGStab.os debian/tmp3/posix/paso/src/Coupler.os debian/tmp3/posix/paso/src/FCT_Solver.os debian/tmp3/posix/paso/src/FluxLimiter.os debian/tmp3/posix/paso/src/Functions.os debian/tmp3/posix/paso/src/GMRES.os debian/tmp3/posix/paso/src/GMRES2.os debian/tmp3/posix/paso/src/MKL.os debian/tmp3/posix/paso/src/MUMPS.os debian/tmp3/posix/paso/src/NewtonGMRES.os debian/tmp3/posix/paso/src/Options.os debian/tmp3/posix/paso/src/PCG.os debian/tmp3/posix/paso/src/PasoUtil.os debian/tmp3/posix/paso/src/Pattern.os debian/tmp3/posix/paso/src/Pattern_mis.os debian/tmp3/posix/paso/src/Pattern_reduceBandwidth.os debian/tmp3/posix/paso/src/Preconditioner.os debian/tmp3/posix/paso/src/ReactiveSolver.os debian/tmp3/posix/paso/src/SchurComplement.os debian/tmp3/posix/paso/src/Smoother.os debian/tmp3/posix/paso/src/Solver.os debian/tmp3/posix/paso/src/Solver_Function.os debian/tmp3/posix/paso/src/SparseMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_getSubmatrix.os debian/tmp3/posix/paso/src/SparseMatrix_nullifyRowsAndCols.os debian/tmp3/posix/paso/src/SparseMatrix_saveHB.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrix.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixMatrixTranspose.os debian/tmp3/posix/paso/src/SparseMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix.os debian/tmp3/posix/paso/src/SystemMatrix_MatrixVector.os debian/tmp3/posix/paso/src/SystemMatrix_copyRemoteCoupleBlock.os debian/tmp3/posix/paso/src/SystemMatrix_debug.os debian/tmp3/posix/paso/src/SystemMatrix_extendedRows.os debian/tmp3/posix/paso/src/SystemMatrix_loadMM.os debian/tmp3/posix/paso/src/SystemMatrix_mergeMainAndCouple.os debian/tmp3/posix/paso/src/SystemMatrixPattern.os debian/tmp3/posix/paso/src/SystemMatrixPattern_unrollBlocks.os debian/tmp3/posix/paso/src/Transport.os debian/tmp3/posix/paso/src/Transport_solve.os debian/tmp3/posix/paso/src/ILU.os debian/tmp3/posix/paso/src/MINRES.os debian/tmp3/posix/paso/src/RILU.os debian/tmp3/posix/paso/src/TFQMR.os debian/tmp3/posix/paso/src/UMFPACK.os debian/tmp3/posix/paso/src/mmio.os debian/tmp3/posix/paso/src/performance.os debian/tmp3/posix/paso/src/solve.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 -Install file: "debian/tmp3/posix/paso/src/libpaso.so" as "debian/stage3/lib/libpaso.so" -g++ -o debian/tmp3/posix/dudley/src/libdudley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/Assemble_AverageElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyElementData.os debian/tmp3/posix/dudley/src/Assemble_CopyNodalData.os debian/tmp3/posix/dudley/src/Assemble_LumpedSystem.os debian/tmp3/posix/dudley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/dudley/src/Assemble_PDE.os debian/tmp3/posix/dudley/src/Assemble_PDE_Points.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/dudley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/dudley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/dudley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/dudley/src/Assemble_getNormal.os debian/tmp3/posix/dudley/src/Assemble_getSize.os debian/tmp3/posix/dudley/src/Assemble_integrate.os debian/tmp3/posix/dudley/src/Assemble_interpolate.os debian/tmp3/posix/dudley/src/DomainFactory.os debian/tmp3/posix/dudley/src/DudleyDomain.os debian/tmp3/posix/dudley/src/ElementFile.os debian/tmp3/posix/dudley/src/ElementFile_createColoring.os debian/tmp3/posix/dudley/src/ElementFile_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/ElementFile_jacobians.os debian/tmp3/posix/dudley/src/IndexList.os debian/tmp3/posix/dudley/src/Mesh_distributeByRankOfDOF.os debian/tmp3/posix/dudley/src/Mesh_getPattern.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/dudley/src/Mesh_optimizeDOFLabeling.os debian/tmp3/posix/dudley/src/Mesh_read.os debian/tmp3/posix/dudley/src/Mesh_readGmsh.os debian/tmp3/posix/dudley/src/Mesh_resolveNodeIds.os debian/tmp3/posix/dudley/src/Mesh_tet4.os debian/tmp3/posix/dudley/src/Mesh_tri3.os debian/tmp3/posix/dudley/src/Mesh_write.os debian/tmp3/posix/dudley/src/NodeFile.os debian/tmp3/posix/dudley/src/NodeFile_createDenseLabelings.os debian/tmp3/posix/dudley/src/NodeFile_createMappings.os debian/tmp3/posix/dudley/src/NodeFile_createTrilinosGraph.os debian/tmp3/posix/dudley/src/NodeFile_gather.os debian/tmp3/posix/dudley/src/ShapeTable.os debian/tmp3/posix/dudley/src/Util.os debian/tmp3/posix/dudley/src/Assemble_gradient.os debian/tmp3/posix/dudley/src/Assemble_jacobians.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16726,20 +16772,9 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/IndexList.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/IndexList.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/dudley/src/libdudley.so" as "debian/stage3/lib/libdudley.so" -g++ -o debian/tmp3/posix/dudley/src/dudleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/dudley/src/dudleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -ldudley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 -Install file: "debian/tmp3/posix/dudley/src/dudleycpp.so" as "debian/stage3/esys/dudley/dudleycpp.so" -g++ -o debian/tmp3/posix/finley/src/Mesh_addPoints.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_addPoints.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_findMatchingFaces.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getPasoPattern.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_getTrilinosGraph.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_glueFaces.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_glueFaces.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_hex20.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex20.cpp -g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex8.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16758,7 +16793,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_joinFaces.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16784,20 +16818,6 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/FinleyDomain.h:60, - from finley/src/FinleyDomain.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, from finley/src/ElementFile.h:21, from finley/src/ElementFile_jacobians.cpp:18: @@ -16807,9 +16827,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_hex8.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_hex8.cpp +g++ -o debian/tmp3/posix/finley/src/Mesh_joinFaces.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_joinFaces.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16836,9 +16855,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/IndexList.h:28, - from finley/src/IndexList.cpp:25: + from debian/stage3/include/finley/Finley.h:32, + from finley/src/FinleyDomain.h:60, + from finley/src/FinleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16853,9 +16872,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_getPasoPattern.cpp:19: + from finley/src/Finley.h:32, + from finley/src/IndexList.h:28, + from finley/src/IndexList.cpp:25: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16872,14 +16891,13 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_hex20.cpp:29: + from finley/src/Mesh_glueFaces.cpp:27: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_optimizeDOFDistribution.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16890,13 +16908,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_hex8.cpp:30: + from finley/src/Mesh_hex20.cpp:29: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_optimizeDOFDistribution.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16914,6 +16933,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_read.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16924,11 +16944,10 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_glueFaces.cpp:27: + from finley/src/Mesh_getPasoPattern.cpp:19: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Mesh_read.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_read.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -16942,7 +16961,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_joinFaces.cpp:27: + from finley/src/Mesh_hex8.cpp:30: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -16953,10 +16972,6 @@ g++ -o debian/tmp3/posix/finley/src/Mesh_rec4.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec4.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_rec8.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_rec8.cpp g++ -o debian/tmp3/posix/finley/src/Mesh_write.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Mesh_write.cpp -g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/NodeFile.cpp -g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Quadrature.cpp -g++ -o debian/tmp3/posix/finley/src/ReferenceElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ReferenceElements.cpp -g++ -o debian/tmp3/posix/finley/src/ShapeFunctions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ShapeFunctions.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16967,14 +16982,17 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_merge.cpp:18: + from finley/src/Mesh_joinFaces.cpp:27: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Util.cpp +g++ -o debian/tmp3/posix/finley/src/NodeFile.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/NodeFile.cpp +g++ -o debian/tmp3/posix/finley/src/Quadrature.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Quadrature.cpp +g++ -o debian/tmp3/posix/finley/src/ReferenceElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ReferenceElements.cpp +g++ -o debian/tmp3/posix/finley/src/ShapeFunctions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/ShapeFunctions.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -16985,13 +17003,14 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_optimizeDOFDistribution.cpp:18: + from finley/src/Mesh_merge.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/finley/src/Util.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse finley/src/Util.cpp /usr/bin/python3 scripts/py_comp.py finley/py_src/readers.py debian/tmp3/posix/finley/py/readers.pyc Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc" /usr/bin/python3 scripts/py_comp.py modellib/py_src/__init__.py debian/tmp3/posix/modellib/__init__.pyc @@ -17005,23 +17024,6 @@ /usr/bin/python3 scripts/py_comp.py modellib/py_src/materials.py debian/tmp3/posix/modellib/materials.pyc Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" /usr/bin/python3 scripts/py_comp.py modellib/py_src/mechanics.py debian/tmp3/posix/modellib/mechanics.pyc -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/finley/Finley.h:32, - from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_read.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" /usr/bin/python3 scripts/py_comp.py modellib/py_src/probe.py debian/tmp3/posix/modellib/probe.pyc Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc" @@ -17032,15 +17034,6 @@ /usr/bin/python3 scripts/py_comp.py pycad/py_src/Triangle.py debian/tmp3/posix/pycad/Triangle.pyc Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" /usr/bin/python3 scripts/py_comp.py pycad/py_src/__init__.py debian/tmp3/posix/pycad/__init__.pyc -Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc -Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc -/usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc -Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc -Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" -/usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17051,33 +17044,59 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_readGmsh.cpp:18: + from finley/src/Mesh_optimizeDOFDistribution.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/design.py debian/tmp3/posix/pycad/design.pyc /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/extras.py debian/tmp3/posix/pycad/extras.pyc +Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/gmsh.py debian/tmp3/posix/pycad/gmsh.pyc +Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/primitives.py debian/tmp3/posix/pycad/primitives.pyc +Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" +/usr/bin/python3 scripts/py_comp.py pycad/py_src/shapes.py debian/tmp3/posix/pycad/shapes.pyc Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" /usr/bin/python3 scripts/py_comp.py pycad/py_src/transformations.py debian/tmp3/posix/pycad/transformations.pyc -Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" -/usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" -/usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc +/usr/bin/python3 scripts/py_comp.py ripley/py_src/MultiResolutionDomain.py debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" -Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h" +/usr/bin/python3 scripts/py_comp.py ripley/py_src/__init__.py debian/tmp3/posix/ripley/py/__init__.pyc Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" -Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h" +Install file: "ripley/src/AbstractAssembler.h" as "debian/stage3/include/ripley/AbstractAssembler.h" Install file: "ripley/src/Brick.h" as "debian/stage3/include/ripley/Brick.h" +Install file: "ripley/src/MultiBrick.h" as "debian/stage3/include/ripley/MultiBrick.h" Install file: "ripley/src/MultiRectangle.h" as "debian/stage3/include/ripley/MultiRectangle.h" Install file: "ripley/src/Rectangle.h" as "debian/stage3/include/ripley/Rectangle.h" -g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools.cpp Install file: "ripley/src/domainhelpers.h" as "debian/stage3/include/ripley/domainhelpers.h" Install file: "ripley/src/RipleyDomain.h" as "debian/stage3/include/ripley/RipleyDomain.h" Install file: "ripley/src/Ripley.h" as "debian/stage3/include/ripley/Ripley.h" Install file: "ripley/src/RipleyException.h" as "debian/stage3/include/ripley/RipleyException.h" Install file: "ripley/src/system_dep.h" as "debian/stage3/include/ripley/system_dep.h" g++ -o debian/tmp3/posix/ripley/src/ripleycpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/ripleycpp.cpp +g++ -o debian/tmp3/posix/ripley/src/blocktools.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/escript/EsysMPI.h:28, + from debian/stage3/include/finley/Finley.h:32, + from finley/src/FinleyDomain.h:60, + from finley/src/Mesh_read.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/ripley/src/blocktools2.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/blocktools2.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -17089,7 +17108,7 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_write.cpp:18: + from finley/src/Mesh_readGmsh.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17104,21 +17123,15 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from finley/src/Finley.h:32, - from finley/src/NodeFile.h:23, - from finley/src/NodeFile.cpp:18: + from debian/stage3/include/finley/Finley.h:32, + from finley/src/FinleyDomain.h:60, + from finley/src/Mesh_rec4.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "escriptcore/src/FileWriter.h" as "debian/stage3/include/escript/FileWriter.h" -Install file: "ripley/src/DefaultAssembler3D.h" as "debian/stage3/include/ripley/DefaultAssembler3D.h" -Install file: "ripley/src/LameAssembler3D.h" as "debian/stage3/include/ripley/LameAssembler3D.h" -Install file: "ripley/src/WaveAssembler3D.h" as "debian/stage3/include/ripley/WaveAssembler3D.h" -Install file: "ripley/src/blocktools.h" as "debian/stage3/include/ripley/blocktools.h" -g++ -o debian/tmp3/posix/ripley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Brick.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17146,17 +17159,22 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/finley/Finley.h:32, from finley/src/FinleyDomain.h:60, - from finley/src/Mesh_rec4.cpp:18: + from finley/src/Mesh_write.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "escriptcore/src/FileWriter.h" as "debian/stage3/include/escript/FileWriter.h" +Install file: "ripley/src/DefaultAssembler3D.h" as "debian/stage3/include/ripley/DefaultAssembler3D.h" +Install file: "ripley/src/LameAssembler3D.h" as "debian/stage3/include/ripley/LameAssembler3D.h" +Install file: "ripley/src/WaveAssembler3D.h" as "debian/stage3/include/ripley/WaveAssembler3D.h" +Install file: "ripley/src/blocktools.h" as "debian/stage3/include/ripley/blocktools.h" +g++ -o debian/tmp3/posix/ripley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Brick.cpp Install file: "ripley/src/DefaultAssembler2D.h" as "debian/stage3/include/ripley/DefaultAssembler2D.h" g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler2D.cpp g++ -o debian/tmp3/posix/ripley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/DefaultAssembler3D.cpp -g++ -o debian/tmp3/posix/ripley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/domainhelpers.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17166,21 +17184,17 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from finley/src/Finley.h:32, - from finley/src/Util.h:23, - from finley/src/Util.cpp:18: + from finley/src/NodeFile.h:23, + from finley/src/NodeFile.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/domainhelpers.cpp Install file: "ripley/src/LameAssembler2D.h" as "debian/stage3/include/ripley/LameAssembler2D.h" g++ -o debian/tmp3/posix/ripley/src/LameAssembler2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/LameAssembler2D.cpp -g++ -o debian/tmp3/posix/ripley/src/LameAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/LameAssembler3D.cpp -g++ -o debian/tmp3/posix/ripley/src/MultiBrick.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiBrick.cpp -g++ -o debian/tmp3/posix/ripley/src/MultiRectangle.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiRectangle.cpp -Install file: "ripley/src/WaveAssembler2D.h" as "debian/stage3/include/ripley/WaveAssembler2D.h" -g++ -o debian/tmp3/posix/ripley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Rectangle.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17189,17 +17203,16 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/escript/AbstractDomain.h:24, - from debian/stage3/include/escript/FunctionSpace.h:24, - from debian/stage3/include/escript/AbstractSystemMatrix.h:22, - from debian/stage3/include/ripley/AbstractAssembler.h:21, - from ripley/src/ripleycpp.cpp:18: + from finley/src/Finley.h:32, + from finley/src/Util.h:23, + from finley/src/Util.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/LameAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/LameAssembler3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17208,17 +17221,21 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/ripley/Ripley.h:28, - from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/DefaultAssembler2D.h:20, - from ripley/src/DefaultAssembler2D.cpp:18: + from debian/stage3/include/escript/AbstractDomain.h:24, + from debian/stage3/include/escript/FunctionSpace.h:24, + from debian/stage3/include/escript/AbstractSystemMatrix.h:22, + from debian/stage3/include/ripley/AbstractAssembler.h:21, + from ripley/src/ripleycpp.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/MultiBrick.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiBrick.cpp /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/ripley/src/MultiRectangle.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/MultiRectangle.cpp +Install file: "ripley/src/WaveAssembler2D.h" as "debian/stage3/include/ripley/WaveAssembler2D.h" +g++ -o debian/tmp3/posix/ripley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/Rectangle.cpp g++ -o debian/tmp3/posix/ripley/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/RipleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -17239,7 +17256,6 @@ 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/ripley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/WaveAssembler2D.cpp -g++ -o debian/tmp3/posix/ripley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/WaveAssembler3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17257,7 +17273,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17277,20 +17292,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so" -g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 -Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so" -/usr/bin/python3 scripts/py_comp.py speckley/py_src/__init__.py debian/tmp3/posix/speckley/py/__init__.pyc -Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc" -Install file: "speckley/src/AbstractAssembler.h" as "debian/stage3/include/speckley/AbstractAssembler.h" -Install file: "speckley/src/Brick.h" as "debian/stage3/include/speckley/Brick.h" -Install file: "speckley/src/Rectangle.h" as "debian/stage3/include/speckley/Rectangle.h" -Install file: "speckley/src/domainhelpers.h" as "debian/stage3/include/speckley/domainhelpers.h" -Install file: "speckley/src/SpeckleyDomain.h" as "debian/stage3/include/speckley/SpeckleyDomain.h" -Install file: "speckley/src/Speckley.h" as "debian/stage3/include/speckley/Speckley.h" -Install file: "speckley/src/SpeckleyException.h" as "debian/stage3/include/speckley/SpeckleyException.h" -Install file: "speckley/src/system_dep.h" as "debian/stage3/include/speckley/system_dep.h" -g++ -o debian/tmp3/posix/speckley/src/speckleycpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/speckleycpp.cpp +g++ -o debian/tmp3/posix/ripley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse ripley/src/WaveAssembler3D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17302,8 +17304,8 @@ from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/LameAssembler2D.h:20, - from ripley/src/LameAssembler2D.cpp:18: + from debian/stage3/include/ripley/DefaultAssembler2D.h:20, + from ripley/src/DefaultAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17320,15 +17322,26 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/MultiBrick.h:21, - from ripley/src/MultiBrick.cpp:18: + from debian/stage3/include/ripley/Rectangle.h:26, + from debian/stage3/include/ripley/LameAssembler2D.h:20, + from ripley/src/LameAssembler2D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +/usr/bin/python3 scripts/py_comp.py speckley/py_src/__init__.py debian/tmp3/posix/speckley/py/__init__.pyc +Install file: "debian/tmp3/posix/speckley/py/__init__.pyc" as "debian/stage3/esys/speckley/__init__.pyc" +Install file: "speckley/src/AbstractAssembler.h" as "debian/stage3/include/speckley/AbstractAssembler.h" +Install file: "speckley/src/Brick.h" as "debian/stage3/include/speckley/Brick.h" +g++ -o debian/tmp3/posix/finley/src/libfinley.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/Assemble_AverageElementData.os debian/tmp3/posix/finley/src/Assemble_CopyElementData.os debian/tmp3/posix/finley/src/Assemble_CopyNodalData.os debian/tmp3/posix/finley/src/Assemble_LumpedSystem.os debian/tmp3/posix/finley/src/Assemble_NodeCoordinates.os debian/tmp3/posix/finley/src/Assemble_PDE.os debian/tmp3/posix/finley/src/Assemble_PDE_Points.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_Single_C.os debian/tmp3/posix/finley/src/Assemble_PDE_System_1D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_2D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_3D.os debian/tmp3/posix/finley/src/Assemble_PDE_System_C.os debian/tmp3/posix/finley/src/Assemble_addToSystemMatrix.os debian/tmp3/posix/finley/src/Assemble_getAssembleParameters.os debian/tmp3/posix/finley/src/Assemble_getNormal.os debian/tmp3/posix/finley/src/Assemble_getSize.os debian/tmp3/posix/finley/src/Assemble_gradient.os debian/tmp3/posix/finley/src/Assemble_integrate.os debian/tmp3/posix/finley/src/Assemble_interpolate.os debian/tmp3/posix/finley/src/Assemble_jacobians.os debian/tmp3/posix/finley/src/DomainFactory.os debian/tmp3/posix/finley/src/ElementFile.os debian/tmp3/posix/finley/src/ElementFile_jacobians.os debian/tmp3/posix/finley/src/FinleyDomain.os debian/tmp3/posix/finley/src/IndexList.os debian/tmp3/posix/finley/src/Mesh_addPoints.os debian/tmp3/posix/finley/src/Mesh_findMatchingFaces.os debian/tmp3/posix/finley/src/Mesh_getPasoPattern.os debian/tmp3/posix/finley/src/Mesh_getTrilinosGraph.os debian/tmp3/posix/finley/src/Mesh_glueFaces.os debian/tmp3/posix/finley/src/Mesh_hex20.os debian/tmp3/posix/finley/src/Mesh_hex8.os debian/tmp3/posix/finley/src/Mesh_joinFaces.os debian/tmp3/posix/finley/src/Mesh_merge.os debian/tmp3/posix/finley/src/Mesh_optimizeDOFDistribution.os debian/tmp3/posix/finley/src/Mesh_read.os debian/tmp3/posix/finley/src/Mesh_readGmsh.os debian/tmp3/posix/finley/src/Mesh_rec4.os debian/tmp3/posix/finley/src/Mesh_rec8.os debian/tmp3/posix/finley/src/Mesh_write.os debian/tmp3/posix/finley/src/NodeFile.os debian/tmp3/posix/finley/src/Quadrature.os debian/tmp3/posix/finley/src/ReferenceElements.os debian/tmp3/posix/finley/src/ShapeFunctions.os debian/tmp3/posix/finley/src/Util.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 +Install file: "speckley/src/Rectangle.h" as "debian/stage3/include/speckley/Rectangle.h" +Install file: "speckley/src/domainhelpers.h" as "debian/stage3/include/speckley/domainhelpers.h" +Install file: "speckley/src/SpeckleyDomain.h" as "debian/stage3/include/speckley/SpeckleyDomain.h" +Install file: "speckley/src/Speckley.h" as "debian/stage3/include/speckley/Speckley.h" +Install file: "speckley/src/SpeckleyException.h" as "debian/stage3/include/speckley/SpeckleyException.h" +Install file: "speckley/src/system_dep.h" as "debian/stage3/include/speckley/system_dep.h" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17339,15 +17352,18 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from debian/stage3/include/ripley/Rectangle.h:26, - from debian/stage3/include/ripley/MultiRectangle.h:21, - from ripley/src/MultiRectangle.cpp:18: + from debian/stage3/include/ripley/Brick.h:26, + from debian/stage3/include/ripley/LameAssembler3D.h:20, + from ripley/src/LameAssembler3D.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/speckleycpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/speckleycpp.cpp +Install file: "debian/tmp3/posix/finley/src/libfinley.so" as "debian/stage3/lib/libfinley.so" +g++ -o debian/tmp3/posix/finley/src/finleycpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/finley/src/finleycpp.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lfinley -lpaso -lescript -lnetcdf_c++4 -lumfpack -lblas -lamd -lpython3.11 -lboost_python311 -lboost_numpy311 In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17359,8 +17375,8 @@ from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, from debian/stage3/include/ripley/Brick.h:26, - from debian/stage3/include/ripley/LameAssembler3D.h:20, - from ripley/src/LameAssembler3D.cpp:18: + from debian/stage3/include/ripley/MultiBrick.h:21, + from ripley/src/MultiBrick.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17377,13 +17393,16 @@ from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/ripley/Ripley.h:28, from debian/stage3/include/ripley/RipleyDomain.h:21, - from ripley/src/RipleyDomain.cpp:18: + from debian/stage3/include/ripley/Rectangle.h:26, + from debian/stage3/include/ripley/MultiRectangle.h:21, + from ripley/src/MultiRectangle.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "debian/tmp3/posix/finley/src/finleycpp.so" as "debian/stage3/esys/finley/finleycpp.so" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17402,6 +17421,24 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/AbstractAssembler.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/AbstractAssembler.cpp +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/escript/EsysMPI.h:28, + from debian/stage3/include/ripley/Ripley.h:28, + from debian/stage3/include/ripley/RipleyDomain.h:21, + from ripley/src/RipleyDomain.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17421,6 +17458,9 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +Install file: "speckley/src/CrossDomainCoupler.h" as "debian/stage3/include/speckley/CrossDomainCoupler.h" +Install file: "speckley/src/DefaultAssembler3D.h" as "debian/stage3/include/speckley/DefaultAssembler3D.h" +Install file: "speckley/src/WaveAssembler3D.h" as "debian/stage3/include/speckley/WaveAssembler3D.h" In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17440,6 +17480,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Brick.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17458,11 +17499,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/AbstractAssembler.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/AbstractAssembler.cpp -Install file: "speckley/src/CrossDomainCoupler.h" as "debian/stage3/include/speckley/CrossDomainCoupler.h" -Install file: "speckley/src/DefaultAssembler3D.h" as "debian/stage3/include/speckley/DefaultAssembler3D.h" -Install file: "speckley/src/WaveAssembler3D.h" as "debian/stage3/include/speckley/WaveAssembler3D.h" -g++ -o debian/tmp3/posix/speckley/src/Brick.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Brick.cpp g++ -o debian/tmp3/posix/speckley/src/BrickGradients.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickGradients.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, @@ -17484,8 +17520,6 @@ | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/speckley/src/BrickIntegrals.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickIntegrals.cpp g++ -o debian/tmp3/posix/speckley/src/BrickReductions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/BrickReductions.cpp -Install file: "speckley/src/DefaultAssembler2D.h" as "debian/stage3/include/speckley/DefaultAssembler2D.h" -g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17522,7 +17556,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler3D.cpp +Install file: "speckley/src/DefaultAssembler2D.h" as "debian/stage3/include/speckley/DefaultAssembler2D.h" +g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler2D.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17541,6 +17576,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/speckley/src/DefaultAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/DefaultAssembler3D.cpp +g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/domainhelpers.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17556,28 +17593,6 @@ /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/SpeckleyDomain.h:21, - from debian/stage3/include/speckley/Rectangle.h:21, - from debian/stage3/include/speckley/DefaultAssembler2D.h:20, - from speckley/src/DefaultAssembler2D.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/checked_delete.hpp:15, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:27, @@ -17622,10 +17637,31 @@ ripley/src/Rectangle.cpp:949:47: note: returned from 'void* operator new [](std::size_t)' 949 | boost::scoped_ptr x(new double[NN0]); | ^ -g++ -o debian/tmp3/posix/speckley/src/domainhelpers.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/domainhelpers.cpp +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/escript/EsysMPI.h:28, + from debian/stage3/include/speckley/Speckley.h:28, + from debian/stage3/include/speckley/SpeckleyDomain.h:21, + from debian/stage3/include/speckley/Rectangle.h:21, + from debian/stage3/include/speckley/DefaultAssembler2D.h:20, + from speckley/src/DefaultAssembler2D.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "speckley/src/WaveAssembler2D.h" as "debian/stage3/include/speckley/WaveAssembler2D.h" g++ -o debian/tmp3/posix/speckley/src/Rectangle.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/Rectangle.cpp -g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lpython3.11 -lboost_python311 -lboost_numpy311 +g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleGradients.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17643,76 +17679,24 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/speckley/src/RectangleGradients.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleGradients.cpp -Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so" +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/escript/EsysMPI.h:28, + from debian/stage3/include/speckley/Speckley.h:28, + from debian/stage3/include/speckley/domainhelpers.h:20, + from speckley/src/domainhelpers.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ g++ -o debian/tmp3/posix/speckley/src/RectangleIntegrals.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleIntegrals.cpp -g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleReductions.cpp -g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/SpeckleyDomain.cpp -g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler2D.cpp -In file included from /usr/include/boost/checked_delete.hpp:15, - from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27, - from /usr/include/boost/smart_ptr/detail/shared_count.hpp:27, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:17: -In function 'void boost::checked_delete(T*) [with T = double]', - inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, - inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: -/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] - 36 | delete x; - | ^~~~~~~~ -ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': -ripley/src/Brick.cpp:1112:51: note: returned from 'void* operator new [](std::size_t)' - 1112 | boost::scoped_ptr z(new double[m_NN[2]]); - | ^ -In function 'void boost::checked_delete(T*) [with T = double]', - inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, - inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: -/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] - 36 | delete x; - | ^~~~~~~~ -ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': -ripley/src/Brick.cpp:1111:51: note: returned from 'void* operator new [](std::size_t)' - 1111 | boost::scoped_ptr y(new double[m_NN[1]]); - | ^ -In function 'void boost::checked_delete(T*) [with T = double]', - inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, - inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: -/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] - 36 | delete x; - | ^~~~~~~~ -ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': -ripley/src/Brick.cpp:1110:51: note: returned from 'void* operator new [](std::size_t)' - 1110 | boost::scoped_ptr x(new double[m_NN[0]]); - | ^ -In function 'void boost::checked_delete(T*) [with T = double]', - inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, - inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: -/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] - 36 | delete x; - | ^~~~~~~~ -ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': -ripley/src/Brick.cpp:1112:51: note: returned from 'void* operator new [](std::size_t)' - 1112 | boost::scoped_ptr z(new double[m_NN[2]]); - | ^ -In function 'void boost::checked_delete(T*) [with T = double]', - inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, - inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: -/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] - 36 | delete x; - | ^~~~~~~~ -ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': -ripley/src/Brick.cpp:1111:51: note: returned from 'void* operator new [](std::size_t)' - 1111 | boost::scoped_ptr y(new double[m_NN[1]]); - | ^ -In function 'void boost::checked_delete(T*) [with T = double]', - inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, - inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: -/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] - 36 | delete x; - | ^~~~~~~~ -ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': -ripley/src/Brick.cpp:1110:51: note: returned from 'void* operator new [](std::size_t)' - 1110 | boost::scoped_ptr x(new double[m_NN[0]]); - | ^ In file included from /usr/include/boost/checked_delete.hpp:15, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:27, @@ -17777,25 +17761,12 @@ speckley/src/Brick.cpp:1138:51: note: returned from 'void* operator new [](std::size_t)' 1138 | boost::scoped_ptr x(new double[m_NN[0]]); | ^ +g++ -o debian/tmp3/posix/speckley/src/RectangleReductions.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/RectangleReductions.cpp +g++ -o debian/tmp3/posix/speckley/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/SpeckleyDomain.cpp +g++ -o debian/tmp3/posix/escriptcore/src/escriptcpp.so -Wl,-z,relro -Wl,-z,now -fopenmp -shared debian/tmp3/posix/escriptcore/src/escriptcpp.os -Ldebian/stage3/lib -L/usr/lib/python3.11/config-3.11-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/usr/lib -lescript -lpython3.11 -lboost_python311 -lboost_numpy311 +g++ -o debian/tmp3/posix/speckley/src/WaveAssembler2D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler2D.cpp +Install file: "debian/tmp3/posix/escriptcore/src/escriptcpp.so" as "debian/stage3/esys/escriptcore/escriptcpp.so" g++ -o debian/tmp3/posix/speckley/src/WaveAssembler3D.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/WaveAssembler3D.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/escript/EsysMPI.h:28, - from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/SpeckleyDomain.h:21, - from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/RectangleGradients.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ Install file: "speckley/src/lagrange_functions.h" as "debian/stage3/include/speckley/lagrange_functions.h" g++ -o debian/tmp3/posix/speckley/src/CrossDomainCoupler.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_RIPLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse speckley/src/CrossDomainCoupler.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, @@ -17807,8 +17778,9 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/escript/EsysMPI.h:28, from debian/stage3/include/speckley/Speckley.h:28, - from debian/stage3/include/speckley/domainhelpers.h:20, - from speckley/src/domainhelpers.cpp:18: + from debian/stage3/include/speckley/SpeckleyDomain.h:21, + from debian/stage3/include/speckley/Rectangle.h:21, + from speckley/src/Rectangle.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17826,7 +17798,7 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/SpeckleyDomain.h:21, from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/RectangleIntegrals.cpp:18: + from speckley/src/RectangleGradients.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -17852,6 +17824,71 @@ Install file: "weipa/src/SpeckleyElements.h" as "debian/stage3/include/weipa/SpeckleyElements.h" Install file: "weipa/src/SpeckleyNodes.h" as "debian/stage3/include/weipa/SpeckleyNodes.h" g++ -o debian/tmp3/posix/weipa/src/DataVar.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/DataVar.cpp +In file included from /usr/include/boost/checked_delete.hpp:15, + from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27, + from /usr/include/boost/smart_ptr/detail/shared_count.hpp:27, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:17: +In function 'void boost::checked_delete(T*) [with T = double]', + inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, + inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: +/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] + 36 | delete x; + | ^~~~~~~~ +ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': +ripley/src/Brick.cpp:1112:51: note: returned from 'void* operator new [](std::size_t)' + 1112 | boost::scoped_ptr z(new double[m_NN[2]]); + | ^ +In function 'void boost::checked_delete(T*) [with T = double]', + inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, + inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: +/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] + 36 | delete x; + | ^~~~~~~~ +ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': +ripley/src/Brick.cpp:1111:51: note: returned from 'void* operator new [](std::size_t)' + 1111 | boost::scoped_ptr y(new double[m_NN[1]]); + | ^ +In function 'void boost::checked_delete(T*) [with T = double]', + inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, + inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: +/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] + 36 | delete x; + | ^~~~~~~~ +ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': +ripley/src/Brick.cpp:1110:51: note: returned from 'void* operator new [](std::size_t)' + 1110 | boost::scoped_ptr x(new double[m_NN[0]]); + | ^ +In function 'void boost::checked_delete(T*) [with T = double]', + inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, + inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: +/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] + 36 | delete x; + | ^~~~~~~~ +ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': +ripley/src/Brick.cpp:1112:51: note: returned from 'void* operator new [](std::size_t)' + 1112 | boost::scoped_ptr z(new double[m_NN[2]]); + | ^ +In function 'void boost::checked_delete(T*) [with T = double]', + inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, + inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: +/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] + 36 | delete x; + | ^~~~~~~~ +ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': +ripley/src/Brick.cpp:1111:51: note: returned from 'void* operator new [](std::size_t)' + 1111 | boost::scoped_ptr y(new double[m_NN[1]]); + | ^ +In function 'void boost::checked_delete(T*) [with T = double]', + inlined from 'boost::scoped_ptr::~scoped_ptr() [with T = double]' at /usr/include/boost/smart_ptr/scoped_ptr.hpp:88:30, + inlined from 'virtual void ripley::Brick::dump(const std::string&) const' at ripley/src/Brick.cpp:1198:1: +/usr/include/boost/core/checked_delete.hpp:36:5: warning: 'void operator delete(void*)' called on pointer returned from a mismatched allocation function [-Wmismatched-new-delete] + 36 | delete x; + | ^~~~~~~~ +ripley/src/Brick.cpp: In member function 'virtual void ripley::Brick::dump(const std::string&) const': +ripley/src/Brick.cpp:1110:51: note: returned from 'void* operator new [](std::size_t)' + 1110 | boost::scoped_ptr x(new double[m_NN[0]]); + | ^ +g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/EscriptDataset.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17863,13 +17900,15 @@ from debian/stage3/include/speckley/Speckley.h:28, from debian/stage3/include/speckley/SpeckleyDomain.h:21, from debian/stage3/include/speckley/Rectangle.h:21, - from speckley/src/Rectangle.cpp:18: + from speckley/src/RectangleIntegrals.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyDomain.cpp +g++ -o debian/tmp3/posix/weipa/src/FinleyElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyElements.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17905,8 +17944,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/EscriptDataset.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/EscriptDataset.cpp -g++ -o debian/tmp3/posix/weipa/src/FinleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17943,25 +17980,6 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/FinleyElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyElements.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/EscriptDataset.h:21, - from weipa/src/EscriptDataset.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyNodes.cpp -g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -17998,25 +18016,8 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyElements.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/DomainChunk.h:21, - from debian/stage3/include/weipa/FinleyDomain.h:21, - from weipa/src/FinleyDomain.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyNodes.cpp +g++ -o debian/tmp3/posix/weipa/src/FinleyNodes.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/FinleyNodes.cpp +g++ -o debian/tmp3/posix/weipa/src/RipleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyDomain.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -18025,9 +18026,8 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/NodeData.h:21, - from debian/stage3/include/weipa/FinleyNodes.h:21, - from weipa/src/FinleyNodes.cpp:18: + from debian/stage3/include/weipa/EscriptDataset.h:21, + from weipa/src/EscriptDataset.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -18051,24 +18051,7 @@ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyDomain.cpp -In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, - from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, - from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, - from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, - from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, - from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, - from /usr/include/boost/shared_ptr.hpp:17, - from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/RipleyElements.h:21, - from weipa/src/RipleyElements.cpp:18: -/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' - 36 | BOOST_PRAGMA_MESSAGE( - | ^~~~~~~~~~~~~~~~~~~~ -/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' - 13 | BOOST_HEADER_DEPRECATED("") - | ^~~~~~~~~~~~~~~~~~~~~~~ +g++ -o debian/tmp3/posix/weipa/src/RipleyElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyElements.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, @@ -18078,15 +18061,16 @@ from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, from debian/stage3/include/weipa/DomainChunk.h:21, - from debian/stage3/include/weipa/RipleyDomain.h:21, - from weipa/src/RipleyDomain.cpp:18: + from debian/stage3/include/weipa/FinleyDomain.h:21, + from weipa/src/FinleyDomain.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' 13 | BOOST_HEADER_DEPRECATED("") | ^~~~~~~~~~~~~~~~~~~~~~~ -g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyElements.cpp +g++ -o debian/tmp3/posix/weipa/src/RipleyNodes.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/RipleyNodes.cpp +g++ -o debian/tmp3/posix/weipa/src/SpeckleyDomain.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyDomain.cpp In file included from /usr/include/boost/checked_delete.hpp:15, from /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:27, from /usr/include/boost/smart_ptr/detail/shared_count.hpp:27, @@ -18131,6 +18115,7 @@ speckley/src/Rectangle.cpp:950:47: note: returned from 'void* operator new [](std::size_t)' 950 | boost::scoped_ptr x(new double[NN0]); | ^ +g++ -o debian/tmp3/posix/weipa/src/SpeckleyElements.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyElements.cpp g++ -o debian/tmp3/posix/weipa/src/SpeckleyNodes.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/SpeckleyNodes.cpp g++ -o debian/tmp3/posix/weipa/src/VisItControl.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/VisItControl.cpp g++ -o debian/tmp3/posix/weipa/src/weipacpp.os -c -Wno-stringop-truncation -g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized -fopenmp -O3 -std=c++11 -pedantic -Wall -fPIC -finline-functions -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -Wno-unused-function -Wno-stringop-truncation -Wno-deprecated-declarations --param=max-vartrack-size=100000000 -isystem /usr/include/python3.11 -isystem /usr/include/boost -fPIC -DSVN_VERSION=-2 -DHAVE_GETHOSTNAME -DHAVE_BYTESWAP_H -DESPYTHON3 -DESYS_HAVE_BOOST_NUMPY -DESYS_DEPRECATED_BOOST_ENDIAN -DESYS_MOVED_BOOST_ENDIAN -DESYS_HAVE_NUMPY_H -DNETCDF4 -DESYS_HAVE_NETCDF -DESYS_HAVE_UMFPACK -DESYS_HAVE_SILO -DESYS_HAVE_BOOST_IO -DESYS_HAVE_PASO -DESYS_HAVE_DUDLEY -DESYS_HAVE_FINLEY -DESYS_HAVE_RIPLEY -DESYS_HAVE_SPECKLEY -DESYS_HAVE_WEIPA -DUSE_DUDLEY -DUSE_FINLEY -DUSE_RIPLEY -DUSE_SPECKLEY -Idebian/stage3/include -I/usr/include -I/usr/include/suitesparse weipa/src/weipacpp.cpp @@ -18142,6 +18127,57 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, + from debian/stage3/include/weipa/DomainChunk.h:21, + from debian/stage3/include/weipa/RipleyDomain.h:21, + from weipa/src/RipleyDomain.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/weipa/weipa.h:28, + from debian/stage3/include/weipa/NodeData.h:21, + from debian/stage3/include/weipa/FinleyNodes.h:21, + from weipa/src/FinleyNodes.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/weipa/weipa.h:28, + from debian/stage3/include/weipa/ElementData.h:21, + from debian/stage3/include/weipa/RipleyElements.h:21, + from weipa/src/RipleyElements.cpp:18: +/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' + 36 | BOOST_PRAGMA_MESSAGE( + | ^~~~~~~~~~~~~~~~~~~~ +/usr/include/boost/detail/iterator.hpp:13:1: note: '#pragma message: This header is deprecated. Use instead.' + 13 | BOOST_HEADER_DEPRECATED("") + | ^~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, + from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, + from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, + from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, + from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, + from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, + from /usr/include/boost/shared_ptr.hpp:17, + from debian/stage3/include/weipa/weipa.h:28, from debian/stage3/include/weipa/NodeData.h:21, from debian/stage3/include/weipa/RipleyNodes.h:21, from weipa/src/RipleyNodes.cpp:18: @@ -18176,9 +18212,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/ElementData.h:21, - from debian/stage3/include/weipa/SpeckleyElements.h:21, - from weipa/src/SpeckleyElements.cpp:18: + from debian/stage3/include/weipa/NodeData.h:21, + from debian/stage3/include/weipa/SpeckleyNodes.h:21, + from weipa/src/SpeckleyNodes.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -18193,9 +18229,9 @@ from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/shared_ptr.hpp:17, from debian/stage3/include/weipa/weipa.h:28, - from debian/stage3/include/weipa/NodeData.h:21, - from debian/stage3/include/weipa/SpeckleyNodes.h:21, - from weipa/src/SpeckleyNodes.cpp:18: + from debian/stage3/include/weipa/ElementData.h:21, + from debian/stage3/include/weipa/SpeckleyElements.h:21, + from weipa/src/SpeckleyElements.cpp:18: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ @@ -18531,10 +18567,10 @@ -------------esys.pycad ..esys.pycad.transformations.pyc ..esys.pycad.transformations -..esys.pycad.primitives.pyc -..esys.pycad.primitives ..esys.pycad.shapes.pyc ..esys.pycad.shapes +..esys.pycad.primitives.pyc +..esys.pycad.primitives ..esys.pycad.gmsh.pyc ..esys.pycad.gmsh esys.pycad.gmsh @@ -20742,44 +20778,6 @@ -------------esys.downunder ..esys.downunder.regularizations.pyc ..esys.downunder.regularizations -..esys.downunder.minimizers.pyc -..esys.downunder.minimizers -..esys.downunder.seismic.pyc -..esys.downunder.seismic -esys.downunder.seismic -Starting dump on esys.downunder.seismic with ignore at [] - HTIWave - OBSPY_AVAILABLE - Ricker - SimpleSEGYWriter - SonicHTIWave - SonicWave - TTIWave - U - VTIWave - WaveBase - Wavelet - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - createAbsorptionLayerFunction - division - escript - lpde - math - np - print_function - sys - time ..esys.downunder.splitinversioncostfunctions.pyc ..esys.downunder.splitinversioncostfunctions esys.downunder.splitinversioncostfunctions @@ -20809,6 +20807,8 @@ np print_function updateHessianWorker +..esys.downunder.mappings.pyc +..esys.downunder.mappings ..esys.downunder.splitminimizers.pyc ..esys.downunder.splitminimizers esys.downunder.splitminimizers @@ -20856,10 +20856,44 @@ np pdetools print_function -..esys.downunder.mappings.pyc -..esys.downunder.mappings -..esys.downunder.inversioncostfunctions.pyc -..esys.downunder.inversioncostfunctions +..esys.downunder.seismic.pyc +..esys.downunder.seismic +esys.downunder.seismic +Starting dump on esys.downunder.seismic with ignore at [] + HTIWave + OBSPY_AVAILABLE + Ricker + SimpleSEGYWriter + SonicHTIWave + SonicWave + TTIWave + U + VTIWave + WaveBase + Wavelet + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + createAbsorptionLayerFunction + division + escript + lpde + math + np + print_function + sys + time +..esys.downunder.minimizers.pyc +..esys.downunder.minimizers ..esys.downunder.magtel2d.pyc ..esys.downunder.magtel2d esys.downunder.magtel2d @@ -20938,34 +20972,8 @@ sys ..esys.downunder.inversions.pyc ..esys.downunder.inversions -..esys.downunder.dcresistivityforwardmodeling.pyc -..esys.downunder.dcresistivityforwardmodeling -esys.downunder.dcresistivityforwardmodeling -Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] - DcResistivityForward - DipoleDipoleSurvey - LinearPDE - Locator - PoleDipoleSurvey - PolePoleSurvey - SchlumbergerSurvey - WennerSurvey - __builtins__ - __cached__ - __doc__ - __file__ - __loader__ - __name__ - __package__ - __spec__ - division - es - pi - print_function - saveSilo - xrange -..esys.downunder.datasources.pyc -..esys.downunder.datasources +..esys.downunder.inversioncostfunctions.pyc +..esys.downunder.inversioncostfunctions ..esys.downunder.domainbuilder.pyc ..esys.downunder.domainbuilder esys.downunder.domainbuilder @@ -20995,6 +21003,34 @@ logging np print_function +..esys.downunder.datasources.pyc +..esys.downunder.datasources +..esys.downunder.dcresistivityforwardmodeling.pyc +..esys.downunder.dcresistivityforwardmodeling +esys.downunder.dcresistivityforwardmodeling +Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] + DcResistivityForward + DipoleDipoleSurvey + LinearPDE + Locator + PoleDipoleSurvey + PolePoleSurvey + SchlumbergerSurvey + WennerSurvey + __builtins__ + __cached__ + __doc__ + __file__ + __loader__ + __name__ + __package__ + __spec__ + division + es + pi + print_function + saveSilo + xrange ..esys.downunder.coordinates.pyc ..esys.downunder.coordinates ..esys.downunder.costfunctions.pyc @@ -22399,10 +22435,10 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.gravity.pyc -..esys.downunder.forwardmodels.gravity -esys.downunder.forwardmodels.gravity -Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] +..esys.downunder.forwardmodels.magnetic.pyc +..esys.downunder.forwardmodels.magnetic +esys.downunder.forwardmodels.magnetic +Starting dump on esys.downunder.forwardmodels.magnetic with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX @@ -22410,12 +22446,13 @@ EPSILON FileWriter ForwardModelWithPotential - GravityModel L2 Lsup + MagneticIntensityModel + MagneticModel NumpyToData - PI - U + Scalar + SelfDemagnetizationModel __all__ __builtins__ __cached__ @@ -22558,10 +22595,10 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.magnetic.pyc -..esys.downunder.forwardmodels.magnetic -esys.downunder.forwardmodels.magnetic -Starting dump on esys.downunder.forwardmodels.magnetic with ignore at [] +..esys.downunder.forwardmodels.gravity.pyc +..esys.downunder.forwardmodels.gravity +esys.downunder.forwardmodels.gravity +Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX @@ -22569,13 +22606,12 @@ EPSILON FileWriter ForwardModelWithPotential + GravityModel L2 Lsup - MagneticIntensityModel - MagneticModel NumpyToData - Scalar - SelfDemagnetizationModel + PI + U __all__ __builtins__ __cached__ @@ -22880,31 +22916,6 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.acoustic.pyc -..esys.downunder.forwardmodels.acoustic -esys.downunder.forwardmodels.acoustic -Starting dump on esys.downunder.forwardmodels.acoustic with ignore at [] - AcousticWaveForm - ForwardModel - HAVE_DIRECT - __all__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - edc - escript - lpde - np - print_function ..esys.downunder.forwardmodels.base.pyc ..esys.downunder.forwardmodels.base esys.downunder.forwardmodels.base @@ -23065,6 +23076,31 @@ wherePositive whereZero zeros +..esys.downunder.forwardmodels.acoustic.pyc +..esys.downunder.forwardmodels.acoustic +esys.downunder.forwardmodels.acoustic +Starting dump on esys.downunder.forwardmodels.acoustic with ignore at [] + AcousticWaveForm + ForwardModel + HAVE_DIRECT + __all__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + division + edc + escript + lpde + np + print_function Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/downunder/apps esys.downunder.apps Starting dump on esys.downunder.apps with ignore at [] @@ -23314,12 +23350,12 @@ whereZero zeros -------------esys.downunder.apps +..esys.downunder.apps.magneticModels.pyc +..esys.downunder.apps.magneticModels ..esys.downunder.apps.seismicModels.pyc ..esys.downunder.apps.seismicModels ..esys.downunder.apps.dcModels.pyc ..esys.downunder.apps.dcModels -..esys.downunder.apps.magneticModels.pyc -..esys.downunder.apps.magneticModels ..esys.downunder.apps.gravityModels.pyc ..esys.downunder.apps.gravityModels ..esys.downunder.apps.MTModels.pyc @@ -23701,8 +23737,8 @@ Copy: /build/reproducible-path/python-escript-5.6/ripley/py_src/MultiResolutionDomain.py esys/ripley/MultiResolutionDomain.py os.makedirs(esys/pycad) Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/transformations.py esys/pycad/transformations.py -Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/primitives.py esys/pycad/primitives.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/shapes.py esys/pycad/shapes.py +Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/primitives.py esys/pycad/primitives.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/gmsh.py esys/pycad/gmsh.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/extras.py esys/pycad/extras.py Copy: /build/reproducible-path/python-escript-5.6/pycad/py_src/design.py esys/pycad/design.py @@ -23724,8 +23760,8 @@ Copy: /build/reproducible-path/python-escript-5.6/finley/py_src/__init__.py esys/finley/__init__.py os.makedirs(esys/escriptcore) Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/util.py esys/escriptcore/util.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/unitsSI.py esys/escriptcore/unitsSI.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/utestselect.py esys/escriptcore/utestselect.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/unitsSI.py esys/escriptcore/unitsSI.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/testing.py esys/escriptcore/testing.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/start.py esys/escriptcore/start.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/splitworld.py esys/escriptcore/splitworld.py @@ -23734,26 +23770,26 @@ Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/pdetools.py esys/escriptcore/pdetools.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/nonlinearPDE.py esys/escriptcore/nonlinearPDE.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/mountains.py esys/escriptcore/mountains.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/linearPDEs.py esys/escriptcore/linearPDEs.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/modelframe.py esys/escriptcore/modelframe.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/models.py esys/escriptcore/models.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/modelframe.py esys/escriptcore/modelframe.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/linearPDEs.py esys/escriptcore/linearPDEs.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/levelset.py esys/escriptcore/levelset.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/heat.py esys/escriptcore/heat.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/flows.py esys/escriptcore/flows.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/gmshrunner.py esys/escriptcore/gmshrunner.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/flows.py esys/escriptcore/flows.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/faultsystems.py esys/escriptcore/faultsystems.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/benchmark.py esys/escriptcore/benchmark.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/datamanager.py esys/escriptcore/datamanager.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/domainCouplers.py esys/escriptcore/domainCouplers.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/datamanager.py esys/escriptcore/datamanager.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/benchmark.py esys/escriptcore/benchmark.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/__init__.py esys/escriptcore/__init__.py os.makedirs(esys/escriptcore/symbolic) Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/utils.py esys/escriptcore/symbolic/utils.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/symconstants.py esys/escriptcore/symbolic/symconstants.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/symbol.py esys/escriptcore/symbolic/symbol.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/functions.py esys/escriptcore/symbolic/functions.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/pretty.py esys/escriptcore/symbolic/pretty.py -Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/evaluator.py esys/escriptcore/symbolic/evaluator.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/functions.py esys/escriptcore/symbolic/functions.py Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/__init__.py esys/escriptcore/symbolic/__init__.py +Copy: /build/reproducible-path/python-escript-5.6/escriptcore/py_src/symbolic/evaluator.py esys/escriptcore/symbolic/evaluator.py os.makedirs(esys/escript) Copy: /build/reproducible-path/python-escript-5.6/escript/py_src/util.py esys/escript/util.py Copy: /build/reproducible-path/python-escript-5.6/escript/py_src/unitsSI.py esys/escript/unitsSI.py @@ -23771,19 +23807,19 @@ Copy: /build/reproducible-path/python-escript-5.6/dudley/py_src/__init__.py esys/dudley/__init__.py os.makedirs(esys/downunder) Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/regularizations.py esys/downunder/regularizations.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/minimizers.py esys/downunder/minimizers.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/seismic.py esys/downunder/seismic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitinversioncostfunctions.py esys/downunder/splitinversioncostfunctions.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/mappings.py esys/downunder/mappings.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitminimizers.py esys/downunder/splitminimizers.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/splitregularizations.py esys/downunder/splitregularizations.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/mappings.py esys/downunder/mappings.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversioncostfunctions.py esys/downunder/inversioncostfunctions.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/seismic.py esys/downunder/seismic.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/minimizers.py esys/downunder/minimizers.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/magtel2d.py esys/downunder/magtel2d.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/magtel1d.py esys/downunder/magtel1d.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversions.py esys/downunder/inversions.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/dcresistivityforwardmodeling.py esys/downunder/dcresistivityforwardmodeling.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/datasources.py esys/downunder/datasources.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/inversioncostfunctions.py esys/downunder/inversioncostfunctions.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/domainbuilder.py esys/downunder/domainbuilder.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/datasources.py esys/downunder/datasources.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/dcresistivityforwardmodeling.py esys/downunder/dcresistivityforwardmodeling.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/coordinates.py esys/downunder/coordinates.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/costfunctions.py esys/downunder/costfunctions.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/__init__.py esys/downunder/__init__.py @@ -23791,16 +23827,16 @@ Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/subsidence.py esys/downunder/forwardmodels/subsidence.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetotelluric2d.py esys/downunder/forwardmodels/magnetotelluric2d.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/pressure.py esys/downunder/forwardmodels/pressure.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/gravity.py esys/downunder/forwardmodels/gravity.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/magnetic.py esys/downunder/forwardmodels/magnetic.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/gravity.py esys/downunder/forwardmodels/gravity.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/dcresistivity.py esys/downunder/forwardmodels/dcresistivity.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/acoustic.py esys/downunder/forwardmodels/acoustic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/base.py esys/downunder/forwardmodels/base.py +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/acoustic.py esys/downunder/forwardmodels/acoustic.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/forwardmodels/__init__.py esys/downunder/forwardmodels/__init__.py os.makedirs(esys/downunder/apps) +Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/magneticModels.py esys/downunder/apps/magneticModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/seismicModels.py esys/downunder/apps/seismicModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/dcModels.py esys/downunder/apps/dcModels.py -Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/magneticModels.py esys/downunder/apps/magneticModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/gravityModels.py esys/downunder/apps/gravityModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/MTModels.py esys/downunder/apps/MTModels.py Copy: /build/reproducible-path/python-escript-5.6/downunder/py_src/apps/__init__.py esys/downunder/apps/__init__.py @@ -23808,12 +23844,12 @@ ln /build/reproducible-path/python-escript-5.6/debian/stage3/bin/run-escript /build/reproducible-path/python-escript-5.6/debian/stage3/bin/run-escript3 find /build/reproducible-path/python-escript-5.6/debian/stage3 -name '*.pyc' -print0| xargs -0 rm -f mkdir -p /build/reproducible-path/python-escript-5.6/debian/tmp3 -scons -j15 build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs +scons -j16 build_dir=/build/reproducible-path/python-escript-5.6/debian/tmp3 verbose=on prefix=/build/reproducible-path/python-escript-5.6/debian/stage3 options_file=debian/sid_options.py docs scons: Reading SConscript files ... 3.11.2 (main, Mar 13 2023, 12:18:29) [GCC 12.2.0] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... (cached) yes Checking for C++ function gethostname()... (cached) yes Checking for C++ header file byteswap.h... (cached) yes @@ -23834,7 +23870,7 @@ Checking for C++ library umfpack... (cached) yes Checking for C++ library siloh5... (cached) yes Checking for C++ library boost_iostreams... (cached) yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-eforkbvp because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-xrxpkmh9 because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -23850,14 +23886,27 @@ cd /build/reproducible-path/python-escript-5.6/doc && tar -cf /build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/escript_examples.tar examples/usersguide/lid_driven_cavity.py examples/usersguide/mount.py examples/usersguide/heatedblock.py examples/usersguide/helmholtz.py examples/usersguide/fluid.py examples/usersguide/poisson.py examples/usersguide/diffusion.py examples/usersguide/poisson_vtk.py examples/usersguide/darcy.py examples/usersguide/dirac.py examples/usersguide/slip.py examples/usersguide/int_save.py examples/usersguide/wave.py examples/usersguide/voxet_reader.py examples/geotutorial/steadystate_variablek.py examples/geotutorial/steadystate.py examples/geotutorial/forward_euler.py examples/geotutorial/myfirstscript.py examples/geotutorial/backward_euler.py examples/cookbook/example01a.py examples/cookbook/example01b.py examples/cookbook/example03b.py examples/inversion/create_netcdf.py examples/inversion/grav_ermapper.py examples/inversion/grav_netcdf.py examples/inversion/gravmag_netcdf.py examples/inversion/gravmag_nodriver.py examples/inversion/mag_netcdf.py examples/inversion/test_commemi1.py examples/inversion/test_commemi4.py examples/usersguide/poisson_matplotlib.py examples/cookbook/example01c.py examples/cookbook/example02.py examples/cookbook/example03a.py examples/cookbook/example07a.py examples/cookbook/example07b.py examples/cookbook/example08a.py examples/cookbook/example08b.py examples/cookbook/example10a.py examples/cookbook/example10b.py examples/cookbook/example11a.py examples/cookbook/example11b.py examples/inversion/plot_ermapper.py examples/inversion/plot_netcdf.py examples/cookbook/cblib.py examples/inversion/content.txt examples/inversion/data/GravitySmall examples/inversion/data/MagneticSmall examples/inversion/data/QLDWestGravity examples/inversion/data/QLDWestMagnetic examples/inversion/data/GravitySmall.ers examples/inversion/data/MagneticSmall.ers examples/inversion/data/QLDWestGravity.ers examples/inversion/data/QLDWestMagnetic.ers examples/inversion/data/GravitySmall.nc examples/inversion/data/MagneticSmall.nc examples/inversion/data/QLDWestGravity.nc examples/inversion/data/QLDWestMagnetic.nc examples/inversion/data/HalfSphere_v1.4.msh (cat doc/doxygen/doxygen_esys; echo "PROJECT_NUMBER="Revision_`svnversion`""; echo OUTPUT_DIRECTORY="/build/reproducible-path/python-escript-5.6/debian/stage3/release/doc/doxygen" ) | doxygen - Install file: "debian/tmp3/posix/downunder/__init__.pyc" as "debian/stage3/esys/downunder/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" Install file: "debian/tmp3/posix/downunder/apps/__init__.pyc" as "debian/stage3/esys/downunder/apps/__init__.pyc" Install file: "debian/tmp3/posix/downunder/apps/dcModels.pyc" as "debian/stage3/esys/downunder/apps/dcModels.pyc" -Install file: "debian/tmp3/posix/downunder/apps/MTModels.pyc" as "debian/stage3/esys/downunder/apps/MTModels.pyc" -Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" Install file: "debian/tmp3/posix/downunder/apps/gravityModels.pyc" as "debian/stage3/esys/downunder/apps/gravityModels.pyc" +Install file: "debian/tmp3/posix/downunder/apps/magneticModels.pyc" as "debian/stage3/esys/downunder/apps/magneticModels.pyc" Install file: "debian/tmp3/posix/downunder/apps/seismicModels.pyc" as "debian/stage3/esys/downunder/apps/seismicModels.pyc" -sh: 1: svnversion: not found Install file: "debian/tmp3/posix/downunder/coordinates.pyc" as "debian/stage3/esys/downunder/coordinates.pyc" +Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" +Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" +Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" +Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" +Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" +sh: line 1: svnversion: command not found warning: Tag 'TCL_SUBST' at line 237 of file '-' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 1026 of file '-' has become obsolete. @@ -23874,19 +23923,6 @@ To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! -Install file: "debian/tmp3/posix/downunder/costfunctions.pyc" as "debian/stage3/esys/downunder/costfunctions.pyc" -Install file: "debian/tmp3/posix/downunder/datasources.pyc" as "debian/stage3/esys/downunder/datasources.pyc" -Install file: "debian/tmp3/posix/downunder/dcresistivityforwardmodeling.pyc" as "debian/stage3/esys/downunder/dcresistivityforwardmodeling.pyc" -Install file: "debian/tmp3/posix/downunder/domainbuilder.pyc" as "debian/stage3/esys/downunder/domainbuilder.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/__init__.pyc" as "debian/stage3/esys/downunder/forwardmodels/__init__.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/acoustic.pyc" as "debian/stage3/esys/downunder/forwardmodels/acoustic.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/base.pyc" as "debian/stage3/esys/downunder/forwardmodels/base.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/dcresistivity.pyc" as "debian/stage3/esys/downunder/forwardmodels/dcresistivity.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/gravity.pyc" as "debian/stage3/esys/downunder/forwardmodels/gravity.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetic.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetic.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/magnetotelluric2d.pyc" as "debian/stage3/esys/downunder/forwardmodels/magnetotelluric2d.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/pressure.pyc" as "debian/stage3/esys/downunder/forwardmodels/pressure.pyc" -Install file: "debian/tmp3/posix/downunder/forwardmodels/subsidence.pyc" as "debian/stage3/esys/downunder/forwardmodels/subsidence.pyc" Install file: "debian/tmp3/posix/downunder/inversioncostfunctions.pyc" as "debian/stage3/esys/downunder/inversioncostfunctions.pyc" Install file: "debian/tmp3/posix/downunder/inversions.pyc" as "debian/stage3/esys/downunder/inversions.pyc" Install file: "debian/tmp3/posix/downunder/magtel1d.pyc" as "debian/stage3/esys/downunder/magtel1d.pyc" @@ -23895,6 +23931,10 @@ Install file: "debian/tmp3/posix/downunder/minimizers.pyc" as "debian/stage3/esys/downunder/minimizers.pyc" Install file: "debian/tmp3/posix/downunder/regularizations.pyc" as "debian/stage3/esys/downunder/regularizations.pyc" Install file: "debian/tmp3/posix/downunder/seismic.pyc" as "debian/stage3/esys/downunder/seismic.pyc" +Install file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc" +Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" +Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" +Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" Doxygen version used: 1.9.4 Searching for include files... Searching for example files... @@ -23945,11 +23985,7 @@ Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/BinaryDataReadyOps.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp... -Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/srcInstall file: "debian/tmp3/posix/downunder/splitinversioncostfunctions.pyc" as "debian/stage3/esys/downunder/splitinversioncostfunctions.pyc" -Install file: "debian/tmp3/posix/downunder/splitregularizations.pyc" as "debian/stage3/esys/downunder/splitregularizations.pyc" -Install file: "debian/tmp3/posix/dudley/py/__init__.pyc" as "debian/stage3/esys/dudley/__init__.pyc" -Install file: "debian/tmp3/posix/downunder/splitminimizers.pyc" as "debian/stage3/esys/downunder/splitminimizers.pyc" -/Data.cpp... +Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.cpp... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Parsing file /build/reproducible-path/python-escript-5.6/escriptcore/src/Data.h... Preprocessing /build/reproducible-path/python-escript-5.6/escriptcore/src/DataAbstract.cpp... @@ -25255,22 +25291,22 @@ Generating code for file ReactiveSolver.h... Parsing code for file RILU.cpp... Parsing code for file SchurComplement.cpp... -Generating code for file SharedComponInstall file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" -Install file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" -Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" +Generating code for file SharedComponInstall file: "debian/tmp3/posix/dudley/py/readers.pyc" as "debian/stage3/esys/dudley/readers.pyc" Install file: "debian/tmp3/posix/escript/__init__.pyc" as "debian/stage3/esys/escript/__init__.pyc" +Install file: "debian/tmp3/posix/escript/datamanager.pyc" as "debian/stage3/esys/escript/datamanager.pyc" +Install file: "debian/tmp3/posix/dudley/py/factorywrappers.pyc" as "debian/stage3/esys/dudley/factorywrappers.pyc" Install file: "debian/tmp3/posix/escript/linearPDEs.pyc" as "debian/stage3/esys/escript/linearPDEs.pyc" Install file: "debian/tmp3/posix/escript/modelframe.pyc" as "debian/stage3/esys/escript/modelframe.pyc" Install file: "debian/tmp3/posix/escript/models.pyc" as "debian/stage3/esys/escript/models.pyc" Install file: "debian/tmp3/posix/escript/pdetools.pyc" as "debian/stage3/esys/escript/pdetools.pyc" Install file: "debian/tmp3/posix/escript/splitworld.pyc" as "debian/stage3/esys/escript/splitworld.pyc" Install file: "debian/tmp3/posix/escript/symbolic.pyc" as "debian/stage3/esys/escript/symbolic.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" -Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" Install file: "debian/tmp3/posix/escript/unitsSI.pyc" as "debian/stage3/esys/escript/unitsSI.pyc" +Install file: "debian/tmp3/posix/escript/util.pyc" as "debian/stage3/esys/escript/util.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/__init__.pyc" as "debian/stage3/esys/escriptcore/__init__.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" Install file: "debian/tmp3/posix/escriptcore/py/datamanager.pyc" as "debian/stage3/esys/escriptcore/datamanager.pyc" Install file: "debian/tmp3/posix/escriptcore/py/domainCouplers.pyc" as "debian/stage3/esys/escriptcore/domainCouplers.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/benchmark.pyc" as "debian/stage3/esys/escriptcore/benchmark.pyc" Install file: "debian/tmp3/posix/escriptcore/py/faultsystems.pyc" as "debian/stage3/esys/escriptcore/faultsystems.pyc" Install file: "debian/tmp3/posix/escriptcore/py/flows.pyc" as "debian/stage3/esys/escriptcore/flows.pyc" Install file: "debian/tmp3/posix/escriptcore/py/gmshrunner.pyc" as "debian/stage3/esys/escriptcore/gmshrunner.pyc" @@ -25286,9 +25322,9 @@ Install file: "debian/tmp3/posix/escriptcore/py/runmodel.pyc" as "debian/stage3/esys/escriptcore/runmodel.pyc" Install file: "debian/tmp3/posix/escriptcore/py/splitworld.pyc" as "debian/stage3/esys/escriptcore/splitworld.pyc" Install file: "debian/tmp3/posix/escriptcore/py/start.pyc" as "debian/stage3/esys/escriptcore/start.pyc" +Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/evaluator.pyc" as "debian/stage3/esys/escriptcore/symbolic/evaluator.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/functions.pyc" as "debian/stage3/esys/escriptcore/symbolic/functions.pyc" -Install file: "debian/tmp3/posix/escriptcore/py/symbolic/__init__.pyc" as "debian/stage3/esys/escriptcore/symbolic/__init__.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/pretty.pyc" as "debian/stage3/esys/escriptcore/symbolic/pretty.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symbol.pyc" as "debian/stage3/esys/escriptcore/symbolic/symbol.pyc" Install file: "debian/tmp3/posix/escriptcore/py/symbolic/symconstants.pyc" as "debian/stage3/esys/escriptcore/symbolic/symconstants.pyc" @@ -25297,8 +25333,8 @@ Install file: "debian/tmp3/posix/escriptcore/py/unitsSI.pyc" as "debian/stage3/esys/escriptcore/unitsSI.pyc" Install file: "debian/tmp3/posix/escriptcore/py/utestselect.pyc" as "debian/stage3/esys/escriptcore/utestselect.pyc" Install file: "debian/tmp3/posix/escriptcore/py/util.pyc" as "debian/stage3/esys/escriptcore/util.pyc" -Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" Install file: "debian/tmp3/posix/finley/py/factorywrappers.pyc" as "debian/stage3/esys/finley/factorywrappers.pyc" +Install file: "debian/tmp3/posix/finley/py/__init__.pyc" as "debian/stage3/esys/finley/__init__.pyc" ents.h... Parsing code for file Smoother.cpp... Parsing code for file solve.cpp... @@ -25957,42 +25993,42 @@ parameter 'tagnamestonums' parameter 'w' Install file: "debian/tmp3/posix/finley/py/readers.pyc" as "debian/stage3/esys/finley/readers.pyc" -Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc" Install file: "debian/tmp3/posix/modellib/flow.pyc" as "debian/stage3/esys/modellib/flow.pyc" +Install file: "debian/tmp3/posix/modellib/__init__.pyc" as "debian/stage3/esys/modellib/__init__.pyc" Install file: "debian/tmp3/posix/modellib/geometry.pyc" as "debian/stage3/esys/modellib/geometry.pyc" +/build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h:39: warning: The following parameters of ripley::MultiBrick::MultiBrick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: + parameter 'points' + parameter 'tags' + parameter 'tagnamestonums' + parameter 'w' + parameter 'subdivisions' Install file: "debian/tmp3/posix/modellib/input.pyc" as "debian/stage3/esys/modellib/input.pyc" -Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" Install file: "debian/tmp3/posix/modellib/mechanics.pyc" as "debian/stage3/esys/modellib/mechanics.pyc" Install file: "debian/tmp3/posix/modellib/probe.pyc" as "debian/stage3/esys/modellib/probe.pyc" +Install file: "debian/tmp3/posix/modellib/materials.pyc" as "debian/stage3/esys/modellib/materials.pyc" Install file: "debian/tmp3/posix/modellib/temperature.pyc" as "debian/stage3/esys/modellib/temperature.pyc" Install file: "debian/tmp3/posix/modellib/visualization.pyc" as "debian/stage3/esys/modellib/visualization.pyc" -Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" Install file: "debian/tmp3/posix/pycad/Triangle.pyc" as "debian/stage3/esys/pycad/Triangle.pyc" Install file: "debian/tmp3/posix/pycad/design.pyc" as "debian/stage3/esys/pycad/design.pyc" Install file: "debian/tmp3/posix/pycad/extras.pyc" as "debian/stage3/esys/pycad/extras.pyc" -Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" -Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" -Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" -/build/reproducible-path/python-escript-5.6/ripley/src/MultiBrick.h:39: warning: The following parameters of ripley::MultiBrick::MultiBrick(dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: - parameter 'points' - parameter 'tags' - parameter 'tagnamestonums' - parameter 'w' - parameter 'subdivisions' -Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" -Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" -Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" /build/reproducible-path/python-escript-5.6/ripley/src/MultiRectangle.h:39: warning: The following parameters of ripley::MultiRectangle::MultiRectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr(), unsigned int subdivisions=1) are not documented: parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' parameter 'subdivisions' +Install file: "debian/tmp3/posix/pycad/gmsh.pyc" as "debian/stage3/esys/pycad/gmsh.pyc" +Install file: "debian/tmp3/posix/pycad/__init__.pyc" as "debian/stage3/esys/pycad/__init__.pyc" +Install file: "debian/tmp3/posix/pycad/primitives.pyc" as "debian/stage3/esys/pycad/primitives.pyc" /build/reproducible-path/python-escript-5.6/ripley/src/Rectangle.h:44: warning: The following parameters of ripley::Rectangle::Rectangle(dim_t n0, dim_t n1, double x0, double y0, double x1, double y1, int d0=-1, int d1=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'points' parameter 'tags' parameter 'tagnamestonums' parameter 'w' +Install file: "debian/tmp3/posix/pycad/shapes.pyc" as "debian/stage3/esys/pycad/shapes.pyc" +Install file: "debian/tmp3/posix/pycad/transformations.pyc" as "debian/stage3/esys/pycad/transformations.pyc" +Install file: "debian/tmp3/posix/ripley/py/MultiResolutionDomain.pyc" as "debian/stage3/esys/ripley/MultiResolutionDomain.pyc" +Install file: "debian/tmp3/posix/ripley/py/__init__.pyc" as "debian/stage3/esys/ripley/__init__.pyc" /build/reproducible-path/python-escript-5.6/speckley/src/Brick.h:42: warning: The following parameters of speckley::Brick::Brick(int order, dim_t n0, dim_t n1, dim_t n2, double x0, double y0, double z0, double x1, double y1, double z1, int d0=-1, int d1=-1, int d2=-1, const std::vector< double > &points=std::vector< double >(), const std::vector< int > &tags=std::vector< int >(), const TagMap &tagnamestonums=TagMap(), escript::SubWorld_ptr w=escript::SubWorld_ptr()) are not documented: parameter 'order' parameter 'points' @@ -26397,32 +26433,10 @@ shapes transformations -------------esys.pycad -..esys.pycad.transformations.pyc -..esys.pycad.transformations -..esys.pycad.extras.pyc -..esys.pycad.extras -esys.pycad.extras -Starting dump on esys.pycad.extras with ignore at [] - __author__ - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - buildFreeSurface - buildLayer - division - layer_cake - print_function - pycad ..esys.pycad.primitives.pyc ..esys.pycad.primitives +..esys.pycad.transformations.pyc +..esys.pycad.transformations ..esys.pycad.shapes.pyc ..esys.pycad.shapes ..esys.pycad.gmsh.pyc @@ -26464,6 +26478,28 @@ os print_function tempfile +..esys.pycad.extras.pyc +..esys.pycad.extras +esys.pycad.extras +Starting dump on esys.pycad.extras with ignore at [] + __author__ + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + buildFreeSurface + buildLayer + division + layer_cake + print_function + pycad ..esys.pycad.design.pyc ..esys.pycad.design esys.pycad.design @@ -26575,6 +26611,34 @@ os print_function saveVTK +..esys.modellib.temperature.pyc +..esys.modellib.temperature +esys.modellib.temperature +Starting dump on esys.modellib.temperature with ignore at [] + Data + IterationDivergenceError + Model + TemperatureAdvection + __builtins__ + __cached__ + __copyright__ + __doc__ + __file__ + __license__ + __loader__ + __name__ + __package__ + __spec__ + __url__ + division + grad + inf + inner + length + lpde + numpy + print_function + sup ..esys.modellib.materials.pyc ..esys.modellib.materials esys.modellib.materials @@ -26759,14 +26823,15 @@ wherePositive whereZero zeros -..esys.modellib.temperature.pyc -..esys.modellib.temperature -esys.modellib.temperature -Starting dump on esys.modellib.temperature with ignore at [] - Data +..esys.modellib.mechanics.pyc +..esys.modellib.mechanics +esys.modellib.mechanics +Starting dump on esys.modellib.mechanics with ignore at [] + DruckerPrager IterationDivergenceError + LinearPDE + Mechanics Model - TemperatureAdvection __builtins__ __cached__ __copyright__ @@ -26779,14 +26844,7 @@ __spec__ __url__ division - grad - inf - inner - length - lpde - numpy print_function - sup ..esys.modellib.input.pyc ..esys.modellib.input esys.modellib.input @@ -26823,28 +26881,6 @@ sup whereNegative wherePositive -..esys.modellib.mechanics.pyc -..esys.modellib.mechanics -esys.modellib.mechanics -Starting dump on esys.modellib.mechanics with ignore at [] - DruckerPrager - IterationDivergenceError - LinearPDE - Mechanics - Model - __builtins__ - __cached__ - __copyright__ - __doc__ - __file__ - __license__ - __loader__ - __name__ - __package__ - __spec__ - __url__ - division - print_function ..esys.modellib.geometry.pyc ..esys.modellib.geometry esys.modellib.geometry @@ -28304,10 +28340,10 @@ print_function readers -------------esys.dudley -..esys.dudley.readers.pyc -..esys.dudley.readers ..esys.dudley.factorywrappers.pyc ..esys.dudley.factorywrappers +..esys.dudley.readers.pyc +..esys.dudley.readers Beginning /build/reproducible-path/python-escript-5.6/debian/stage3/esys/downunder esys.downunder Starting dump on esys.downunder with ignore at ['forwardmodels', 'apps'] @@ -28612,27 +28648,6 @@ subsidence xrange -------------esys.downunder -..esys.downunder.splitminimizers.pyc -..esys.downunder.splitminimizers -esys.downunder.splitminimizers -Starting dump on esys.downunder.splitminimizers with ignore at [] - AbstractMinimizer - ArithmeticTuple - FunctionJob - Job - SplitInversionCostFunction - SplitMinimizerLBFGS - __builtins__ - __cached__ - __doc__ - __file__ - __loader__ - __name__ - __package__ - __spec__ - division - np - print_function ..esys.downunder.splitregularizations.pyc ..esys.downunder.splitregularizations esys.downunder.splitregularizations @@ -28659,6 +28674,27 @@ np pdetools print_function +..esys.downunder.splitminimizers.pyc +..esys.downunder.splitminimizers +esys.downunder.splitminimizers +Starting dump on esys.downunder.splitminimizers with ignore at [] + AbstractMinimizer + ArithmeticTuple + FunctionJob + Job + SplitInversionCostFunction + SplitMinimizerLBFGS + __builtins__ + __cached__ + __doc__ + __file__ + __loader__ + __name__ + __package__ + __spec__ + division + np + print_function ..esys.downunder.splitinversioncostfunctions.pyc ..esys.downunder.splitinversioncostfunctions esys.downunder.splitinversioncostfunctions @@ -28728,6 +28764,8 @@ ..esys.downunder.regularizations ..esys.downunder.minimizers.pyc ..esys.downunder.minimizers +..esys.downunder.mappings.pyc +..esys.downunder.mappings ..esys.downunder.magtel2d.pyc ..esys.downunder.magtel2d esys.downunder.magtel2d @@ -28782,12 +28820,6 @@ sys types weipa -..esys.downunder.mappings.pyc -..esys.downunder.mappings -..esys.downunder.inversions.pyc -..esys.downunder.inversions -..esys.downunder.inversioncostfunctions.pyc -..esys.downunder.inversioncostfunctions ..esys.downunder.magtel1d.pyc ..esys.downunder.magtel1d esys.downunder.magtel1d @@ -28810,32 +28842,10 @@ numpy print_function sys -..esys.downunder.dcresistivityforwardmodeling.pyc -..esys.downunder.dcresistivityforwardmodeling -esys.downunder.dcresistivityforwardmodeling -Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] - DcResistivityForward - DipoleDipoleSurvey - LinearPDE - Locator - PoleDipoleSurvey - PolePoleSurvey - SchlumbergerSurvey - WennerSurvey - __builtins__ - __cached__ - __doc__ - __file__ - __loader__ - __name__ - __package__ - __spec__ - division - es - pi - print_function - saveSilo - xrange +..esys.downunder.inversions.pyc +..esys.downunder.inversions +..esys.downunder.inversioncostfunctions.pyc +..esys.downunder.inversioncostfunctions ..esys.downunder.domainbuilder.pyc ..esys.downunder.domainbuilder esys.downunder.domainbuilder @@ -28865,6 +28875,32 @@ logging np print_function +..esys.downunder.dcresistivityforwardmodeling.pyc +..esys.downunder.dcresistivityforwardmodeling +esys.downunder.dcresistivityforwardmodeling +Starting dump on esys.downunder.dcresistivityforwardmodeling with ignore at [] + DcResistivityForward + DipoleDipoleSurvey + LinearPDE + Locator + PoleDipoleSurvey + PolePoleSurvey + SchlumbergerSurvey + WennerSurvey + __builtins__ + __cached__ + __doc__ + __file__ + __loader__ + __name__ + __package__ + __spec__ + division + es + pi + print_function + saveSilo + xrange ..esys.downunder.datasources.pyc ..esys.downunder.datasources ..esys.downunder.costfunctions.pyc @@ -30431,25 +30467,23 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.dcresistivity.pyc -..esys.downunder.forwardmodels.dcresistivity -esys.downunder.forwardmodels.dcresistivity -Starting dump on esys.downunder.forwardmodels.dcresistivity with ignore at [] +..esys.downunder.forwardmodels.gravity.pyc +..esys.downunder.forwardmodels.gravity +esys.downunder.forwardmodels.gravity +Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data - DcRes - DiracDeltaFunctions EPSILON FileWriter - ForwardModel + ForwardModelWithPotential + GravityModel L2 - LinearPDE - Locator Lsup NumpyToData - Scalar + PI + U __all__ __builtins__ __cached__ @@ -30532,7 +30566,6 @@ log10 longestEdge makeTagMap - makeTransformation matchShape matchType math @@ -30593,23 +30626,25 @@ wherePositive whereZero zeros -..esys.downunder.forwardmodels.gravity.pyc -..esys.downunder.forwardmodels.gravity -esys.downunder.forwardmodels.gravity -Starting dump on esys.downunder.forwardmodels.gravity with ignore at [] +..esys.downunder.forwardmodels.dcresistivity.pyc +..esys.downunder.forwardmodels.dcresistivity +esys.downunder.forwardmodels.dcresistivity +Starting dump on esys.downunder.forwardmodels.dcresistivity with ignore at [] Abs C_GeneralTensorProduct DBLE_MAX Data + DcRes + DiracDeltaFunctions EPSILON FileWriter - ForwardModelWithPotential - GravityModel + ForwardModel L2 + LinearPDE + Locator Lsup NumpyToData - PI - U + Scalar __all__ __builtins__ __cached__ @@ -30692,6 +30727,7 @@ log10 longestEdge makeTagMap + makeTransformation matchShape matchType math @@ -31186,16 +31222,16 @@ whereZero zeros -------------esys.downunder.apps -..esys.downunder.apps.gravityModels.pyc -..esys.downunder.apps.gravityModels ..esys.downunder.apps.seismicModels.pyc ..esys.downunder.apps.seismicModels ..esys.downunder.apps.magneticModels.pyc ..esys.downunder.apps.magneticModels -..esys.downunder.apps.MTModels.pyc -..esys.downunder.apps.MTModels +..esys.downunder.apps.gravityModels.pyc +..esys.downunder.apps.gravityModels ..esys.downunder.apps.dcModels.pyc ..esys.downunder.apps.dcModels +..esys.downunder.apps.MTModels.pyc +..esys.downunder.apps.MTModels Running Sphinx v5.3.0 WARNING: html_static_path entry '_static' does not exist locale_dir /build/reproducible-path/python-escript-5.6/debian/tmp3/sphinx_int/locales/en/LC_MESSAGES does not exists @@ -31570,7 +31606,7 @@ 3.11.2 (main, Mar 13 2023, 12:18:29) [GCC 12.2.0] Building with the following additional flags from debian: [['cpp_flags', '-Wdate-time -D_FORTIFY_SOURCE=2'], ['cxx_extra', '-g -O2 -ffile-prefix-map=/build/reproducible-path/python-escript-5.6=. -fstack-protector-strong -Wformat -Werror=format-security -Wno-uninitialized'], ['ld_extra', '-Wl,-z,relro -Wl,-z,now']] Using options in debian/sid_options_mpi.py. -/bin/sh: 1: svnversion: not found +/bin/sh: line 1: svnversion: command not found Checking whether the C++ compiler works... yes Checking for C++ function gethostname()... yes Checking for C++ header file byteswap.h... yes @@ -31592,7 +31628,7 @@ Checking for C++ library siloh5... yes Checking for C++ library mpi_cxx... yes Checking for C++ library boost_iostreams... yes -Matplotlib created a temporary config/cache directory at /tmp/matplotlib-k1sihe78 because the default path (/nonexistent/first-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. +Matplotlib created a temporary config/cache directory at /tmp/matplotlib-9eukg22y because the default path (/nonexistent/second-build/.config/matplotlib) is not a writable directory; it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. Traceback (most recent call last): File "", line 1, in ImportError: cannot import name 'griddata' from 'matplotlib.mlab' (/usr/lib/python3/dist-packages/matplotlib/mlab.py) @@ -36524,7 +36560,7 @@ rm -f utest.sh make[1]: Leaving directory '/build/reproducible-path/python-escript-5.6' dh_auto_test -O-v - rm -fr -- /tmp/dh-xdg-rundir-E0rHaRSL + rm -fr -- /tmp/dh-xdg-rundir-zWQY15FY create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary -v @@ -36570,21 +36606,21 @@ install -p -m0644 debian/copyright debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/copyright install -p -m0644 debian/copyright debian/python-escript-doc/usr/share/doc/python-escript-doc/copyright install -m0755 -d debian/python-escript-doc/usr/share/doc-base/ - install -p -m0644 debian/python-escript-doc.doc-base.2 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-cookbook - install -p -m0644 debian/python-escript-doc.doc-base.5 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-c\+\+-side - install -p -m0644 debian/python-escript-doc.doc-base.1 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-install-guide - install -p -m0644 debian/python-escript-doc.doc-base.4 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-inversion-guide install -p -m0644 debian/python-escript-doc.doc-base.3 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-user-guide + install -p -m0644 debian/python-escript-doc.doc-base.1 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-install-guide install -p -m0644 debian/python-escript-doc.doc-base.6 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-python-api + install -p -m0644 debian/python-escript-doc.doc-base.2 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-cookbook + install -p -m0644 debian/python-escript-doc.doc-base.4 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-inversion-guide + install -p -m0644 debian/python-escript-doc.doc-base.5 debian/python-escript-doc/usr/share/doc-base/python-escript-doc.escript-c\+\+-side dh_sphinxdoc -O-v - ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js ln -sf ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js - ln -sf ../../../../javascript/sphinxdoc/1.0/_sphinx_javascript_frameworks_compat.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/_sphinx_javascript_frameworks_compat.js ln -sf ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sphinx_highlight.js - ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js + ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js + ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js + ln -sf ../../../../javascript/sphinxdoc/1.0/_sphinx_javascript_frameworks_compat.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/_sphinx_javascript_frameworks_compat.js + ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars mv debian/python-escript-doc.substvars.new debian/python-escript-doc.substvars @@ -36593,15 +36629,15 @@ debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/python-escript-5.6' dh_installchangelogs debian/changelog.trivial + install -m0755 -d debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi + install -p -m0644 debian/.debhelper/generated/python3-escript-mpi/dh_installchangelogs.dch.trimmed debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog.Debian + install -p -m0644 debian/changelog.trivial debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog install -m0755 -d debian/python-escript-doc/usr/share/doc/python-escript-doc install -p -m0644 debian/.debhelper/generated/python-escript-doc/dh_installchangelogs.dch.trimmed debian/python-escript-doc/usr/share/doc/python-escript-doc/changelog.Debian install -p -m0644 debian/changelog.trivial debian/python-escript-doc/usr/share/doc/python-escript-doc/changelog install -m0755 -d debian/python3-escript/usr/share/doc/python3-escript install -p -m0644 debian/.debhelper/generated/python3-escript/dh_installchangelogs.dch.trimmed debian/python3-escript/usr/share/doc/python3-escript/changelog.Debian install -p -m0644 debian/changelog.trivial debian/python3-escript/usr/share/doc/python3-escript/changelog - install -m0755 -d debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi - install -p -m0644 debian/.debhelper/generated/python3-escript-mpi/dh_installchangelogs.dch.trimmed debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog.Debian - install -p -m0644 debian/changelog.trivial debian/python3-escript-mpi/usr/share/doc/python3-escript-mpi/changelog make[1]: Leaving directory '/build/reproducible-path/python-escript-5.6' dh_installexamples -O-v dh_installexamples: warning: Cannot auto-detect main package for python-escript-doc. If the default is wrong, please use --doc-main-package @@ -36634,56 +36670,28 @@ install -p -m0644 debian/python-escript-doc.lintian-overrides debian/python-escript-doc/usr/share/lintian/overrides/python-escript-doc dh_perl -O-v dh_link -O-v - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js - ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js ln -s ../../../../javascript/sphinxdoc/1.0/sidebar.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sidebar.js - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js - ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/_sphinx_javascript_frameworks_compat.js - ln -s ../../../../javascript/sphinxdoc/1.0/_sphinx_javascript_frameworks_compat.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/_sphinx_javascript_frameworks_compat.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sphinx_highlight.js ln -s ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/sphinx_highlight.js - rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js - ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/searchtools.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js + ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/doctools.js rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/jquery.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js + ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/language_data.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/_sphinx_javascript_frameworks_compat.js + ln -s ../../../../javascript/sphinxdoc/1.0/_sphinx_javascript_frameworks_compat.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/_sphinx_javascript_frameworks_compat.js + rm -f debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js + ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/underscore.js dh_strip_nondeterminism -O-v Using 1641037225 as canonical time Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classdudley_1_1DudleyException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classdudley_1_1DudleyDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/bdwn.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/bc_s.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_a.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_on.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_off.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1SystemMatrixPattern.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1SparseMatrix.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1Pattern.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler__t.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1Rectangle.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1Brick.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataAbstract.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AssertException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractTransportProblem.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractSystemMatrix.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractReducer.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractContinuousDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01double_01_4.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01cplx__t_01_4.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1LinearSystem.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1Function.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/splitbar.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/open.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/nav_h.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/nav_g.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/nav_f.png using File::StripNondeterminism::handlers::png @@ -36691,20 +36699,13 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/folderclosed.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/doc.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/closed.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1WeipaException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyNodes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyElements.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyNodes.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyElements.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiRectangle.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiBrick.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Brick.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01double_01_4.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler_3_01cplx__t_01_4.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1LinearSystem.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1Function.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/splitbar.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/open.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1NodeData.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyNodes.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1FinleyElements.png using File::StripNondeterminism::handlers::png @@ -36712,13 +36713,27 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1ElementData.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1DomainChunk.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler3D.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataTagged.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataReady.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataLazy.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataExpanded.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataEmpty.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataConstant.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1WeipaException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyNodes.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyElements.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyNodes.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyElements.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classweipa_1_1RipleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_a.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_on.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/sync_off.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1SystemMatrixPattern.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1SparseMatrix.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1Pattern.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/structpaso_1_1MUMPS__Handler__t.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1SpeckleyDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1Rectangle.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1Brick.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classspeckley_1_1AbstractAssembler.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1WaveAssembler3D.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1WaveAssembler2D.png using File::StripNondeterminism::handlers::png @@ -36733,13 +36748,6 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classfinley_1_1FinleyDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1ValueError.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NonReducedVariable.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIScalarReducer.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIDataReducer.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1IOError.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1FunctionSpaceException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1EsysException.png using File::StripNondeterminism::handlers::png - Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DomainException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TransportProblemException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1TestDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SystemMatrixException.png using File::StripNondeterminism::handlers::png @@ -36747,6 +36755,34 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1SplitWorldException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NullDomain.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NotImplementedError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiRectangle.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1MultiBrick.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1LameAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler3D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1DefaultAssembler2D.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classripley_1_1Brick.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataTagged.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataReady.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataLazy.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataExpanded.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataEmpty.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataConstant.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DataAbstract.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AssertException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractTransportProblem.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractSystemMatrix.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractReducer.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1AbstractContinuousDomain.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1NonReducedVariable.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIScalarReducer.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1MPIDataReducer.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1IOError.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1FunctionSpaceException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1EsysException.png using File::StripNondeterminism::handlers::png + Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/classescript_1_1DomainException.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/examples/escript_examples.tar.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/python_html/_static/minus.png using File::StripNondeterminism::handlers::png @@ -36755,36 +36791,36 @@ Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_h.png using File::StripNondeterminism::handlers::png Normalizing debian/python-escript-doc/usr/share/doc/python-escript-doc/c++_html/tab_b.png using File::StripNondeterminism::handlers::png dh_compress -O-v - cd debian/python3-escript - cd debian/python-escript-doc cd debian/python3-escript-mpi + cd debian/python-escript-doc + cd debian/python3-escript + chmod a-x usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 chmod a-x usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 + gzip -9nf usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 gzip -9nf usr/share/doc/python3-escript/changelog usr/share/doc/python3-escript/changelog.Debian usr/share/man/man1/run-escript3.1 cd '/build/reproducible-path/python-escript-5.6' - chmod a-x usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 - gzip -9nf usr/share/doc/python3-escript-mpi/changelog usr/share/doc/python3-escript-mpi/changelog.Debian usr/share/man/man1/run-escript3-mpi.1 cd '/build/reproducible-path/python-escript-5.6' chmod a-x usr/share/doc/python-escript-doc/changelog usr/share/doc/python-escript-doc/changelog.Debian usr/share/doc/python-escript-doc/cookbook.pdf usr/share/doc/python-escript-doc/install.pdf usr/share/doc/python-escript-doc/inversion.pdf usr/share/doc/python-escript-doc/user.pdf gzip -9nf usr/share/doc/python-escript-doc/changelog usr/share/doc/python-escript-doc/changelog.Debian usr/share/doc/python-escript-doc/cookbook.pdf usr/share/doc/python-escript-doc/install.pdf usr/share/doc/python-escript-doc/inversion.pdf usr/share/doc/python-escript-doc/user.pdf cd '/build/reproducible-path/python-escript-5.6' dh_fixperms -O-v find debian/python3-escript-mpi -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 - find debian/python3-escript -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-escript-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 + find debian/python3-escript -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-escript-mpi ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-escript ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s - find debian/python3-escript/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript-mpi/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-escript/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/python3-escript/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-escript/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 - find debian/python3-escript/usr/share/man debian/python3-escript/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-escript/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-escript-mpi/usr/share/man debian/python3-escript-mpi/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-escript -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/python3-escript/usr/share/man debian/python3-escript/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/python3-escript/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x + find debian/python3-escript -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-escript-mpi/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x - find debian/python3-escript/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/python3-escript/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-escript-mpi/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w + find debian/python3-escript/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-escript-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-escript-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-escript-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-escript-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 @@ -36822,8 +36858,8 @@ chmod 0644 -- debian/python3-escript/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-escript.debug chown 0:0 -- debian/python3-escript/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-escript.debug dh_strip -a -O-v - install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0 - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libescript.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug + install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libripley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4a/8cdb99d08250d6a86ea1dd3cd697bdef6de6c3.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4a/8cdb99d08250d6a86ea1dd3cd697bdef6de6c3.debug @@ -36878,12 +36914,18 @@ chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/2e/9f794b5c2ab9b7dd471f752ced102582247176.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/2e/9f794b5c2ab9b7dd471f752ced102582247176.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so + chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug + chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libripley.so install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/b1 objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/speckley/speckleycpp.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/b1/b46df6f3d812f3137513445840d87de79bc1c0.debug + objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug debian/python3-escript/usr/lib/python3-escript/lib/libripley.so chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/b1/b46df6f3d812f3137513445840d87de79bc1c0.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/b1/b46df6f3d812f3137513445840d87de79bc1c0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/speckley/speckleycpp.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/b1/b46df6f3d812f3137513445840d87de79bc1c0.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/speckley/speckleycpp.so + install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70 + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/ripley/ripleycpp.so debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/fe/fda93e0be51b91549fad33c0dd98e04531a53a.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/fe/fda93e0be51b91549fad33c0dd98e04531a53a.debug @@ -36913,50 +36955,44 @@ chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ac/144de23af3b519c627333e6fe4ca0eea68f3e2.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ac/144de23af3b519c627333e6fe4ca0eea68f3e2.debug strip --remove-section=.comment --remove-section=.note debian/python3-escript-mpi/usr/lib/python3-escript-mpi/escript-overlord - chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug - chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libescript.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/ac/144de23af3b519c627333e6fe4ca0eea68f3e2.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/escript-overlord - objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug debian/python3-escript/usr/lib/python3-escript/lib/libescript.so install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPIredirect debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/ad1c1cdc9faa48489c3a38f5fea00cf0f2d20d.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/ad1c1cdc9faa48489c3a38f5fea00cf0f2d20d.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/ad1c1cdc9faa48489c3a38f5fea00cf0f2d20d.debug strip --remove-section=.comment --remove-section=.note debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPIredirect objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/8a/ad1c1cdc9faa48489c3a38f5fea00cf0f2d20d.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPIredirect - install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/8d - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/8d/a52ff6267ad1143e94c7b7004bbabb9566a06a.debug install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPI debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4c/64d0ed2f8f0bbb845f150e56ad6057b8f9dee3.debug chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4c/64d0ed2f8f0bbb845f150e56ad6057b8f9dee3.debug chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4c/64d0ed2f8f0bbb845f150e56ad6057b8f9dee3.debug strip --remove-section=.comment --remove-section=.note debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPI objcopy --add-gnu-debuglink debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/lib/debug/.build-id/4c/64d0ed2f8f0bbb845f150e56ad6057b8f9dee3.debug debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPI + chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug + chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/share/doc ln -s python3-escript-mpi debian/.debhelper/python3-escript-mpi/dbgsym-root/usr/share/doc/python3-escript-mpi-dbgsym install -m0755 -d debian/.debhelper/python3-escript-mpi + objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so + install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/8d + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/8d/a52ff6267ad1143e94c7b7004bbabb9566a06a.debug chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/8d/a52ff6267ad1143e94c7b7004bbabb9566a06a.debug chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/8d/a52ff6267ad1143e94c7b7004bbabb9566a06a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/8d/a52ff6267ad1143e94c7b7004bbabb9566a06a.debug debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so - install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libripley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug - chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug - chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libripley.so - objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/7c/d34e5034465c2e5d15f4b5dbd237680cac1c73.debug debian/python3-escript/usr/lib/python3-escript/lib/libripley.so - install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70 - objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug - chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug - chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug - strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so - objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/70/67fa20258b35df6240691595b8b526a2a7a22d.debug debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/fa/ab745677626132a8f62c736d25d8ad40d09b0e.debug chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/fa/ab745677626132a8f62c736d25d8ad40d09b0e.debug chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/fa/ab745677626132a8f62c736d25d8ad40d09b0e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/fa/ab745677626132a8f62c736d25d8ad40d09b0e.debug debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so + install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0 + objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libescript.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug + chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug + chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug + strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-escript/usr/lib/python3-escript/lib/libescript.so + objcopy --add-gnu-debuglink debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/c0/b2bf05d45803cdfc09af0decb44a8e332b1c41.debug debian/python3-escript/usr/lib/python3-escript/lib/libescript.so install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/python3-escript/usr/lib/python3-escript/lib/libpaso.so debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/be/39fda02bcf8dccb521c4f09bcb17532730568c.debug chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/usr/lib/debug/.build-id/be/39fda02bcf8dccb521c4f09bcb17532730568c.debug @@ -37021,7 +37057,7 @@ # so libraries we just built are checked as well dh_shlibdeps -ppython3-escript -Npython3-escript-mpi -Npython-escript-doc -P/build/reproducible-path/python-escript-5.6/debian/python3-escript -l/build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib install -m0755 -d /build/reproducible-path/python-escript-5.6/debian/python3-escript/DEBIAN - dpkg-shlibdeps -Tdebian/python3-escript.substvars -l/build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libescript.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libripley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libpaso.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libdudley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/weipa/weipacpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/speckley/speckleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/ripley/ripleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/finley/finleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/escriptcore/escriptcpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/dudley/dudleycpp.so + dpkg-shlibdeps -Tdebian/python3-escript.substvars -l/build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libripley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libfinley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libweipa.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libspeckley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libescript.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libpaso.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/lib/libdudley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/weipa/weipacpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/speckley/speckleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/ripley/ripleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/finley/finleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/escriptcore/escriptcpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript/usr/lib/python3-escript/esys/dudley/dudleycpp.so dh_shlibdeps -ppython3-escript-mpi -Npython3-escript -Npython-escript-doc -P/build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi -l/build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib install -m0755 -d /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/DEBIAN dpkg-shlibdeps -Tdebian/python3-escript-mpi.substvars -l/build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/escript-overlord /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPIredirect /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/pythonMPI /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libweipa.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libspeckley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libripley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libpaso.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libfinley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libescriptreader.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libescript.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/lib/libdudley.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/weipa/weipacpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/speckley/speckleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/ripley/ripleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/finley/finleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/dudley/dudleycpp.so /build/reproducible-path/python-escript-5.6/debian/python3-escript-mpi/usr/lib/python3-escript-mpi/esys/escriptcore/escriptcpp.so @@ -37047,15 +37083,15 @@ chown 0:0 -- debian/python3-escript-mpi/DEBIAN/prerm install -m0755 -d debian/python-escript-doc/DEBIAN dh_gencontrol -O-v - install -m0755 -d debian/python-escript-doc/DEBIAN - echo misc:Depends= >> debian/python-escript-doc.substvars - echo misc:Pre-Depends= >> debian/python-escript-doc.substvars - dpkg-gencontrol -ppython-escript-doc -ldebian/changelog -Tdebian/python-escript-doc.substvars -Pdebian/python-escript-doc install -m0755 -d debian/python3-escript-mpi/DEBIAN echo misc:Depends= >> debian/python3-escript-mpi.substvars echo misc:Pre-Depends= >> debian/python3-escript-mpi.substvars install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-escript-mpi -ldebian/changelog -Tdebian/python3-escript-mpi.substvars -Pdebian/.debhelper/python3-escript-mpi/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-escript-mpi-dbgsym "-DDepends=python3-escript-mpi (= \${binary:Version})" "-DDescription=debug symbols for python3-escript-mpi" "-DBuild-Ids=212ce0b1cd0e9b00f19af1da8ad2cb9b4aa94401 2e9f794b5c2ab9b7dd471f752ced102582247176 37cd625b68b14ecb45130a3bb86a4ddd4d36a228 42351934b7445613ba887bdd3fee1f311f22c29e 4a8cdb99d08250d6a86ea1dd3cd697bdef6de6c3 4c64d0ed2f8f0bbb845f150e56ad6057b8f9dee3 609c482bb64a4629e43cc21b579c2855721ed82a 64bb0acce24f3f22b4fa17240f365f0af83cbc08 7bdab400519a3a95ae49e615e3f68be5c98ed553 8aad1c1cdc9faa48489c3a38f5fea00cf0f2d20d 943052de7fd177cb449dec18355e879f60d73bfd 9dfc3ee34f4b7ed2efe045d697afd0b756875aac ac144de23af3b519c627333e6fe4ca0eea68f3e2 b1b46df6f3d812f3137513445840d87de79bc1c0 df3f4fbf575523c1b8e2912ab30c55cb89ecd128 ef2128b555c07fef100947274e70c9116bb5c0da fefda93e0be51b91549fad33c0dd98e04531a53a" -DSection=debug -UMulti-Arch -UReplaces -UBreaks + install -m0755 -d debian/python-escript-doc/DEBIAN + echo misc:Depends= >> debian/python-escript-doc.substvars + echo misc:Pre-Depends= >> debian/python-escript-doc.substvars + dpkg-gencontrol -ppython-escript-doc -ldebian/changelog -Tdebian/python-escript-doc.substvars -Pdebian/python-escript-doc install -m0755 -d debian/python3-escript/DEBIAN echo misc:Depends= >> debian/python3-escript.substvars echo misc:Pre-Depends= >> debian/python3-escript.substvars @@ -37067,45 +37103,45 @@ chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-escript -ldebian/changelog -Tdebian/python3-escript.substvars -Pdebian/python3-escript +dpkg-gencontrol: warning: package python-escript-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined + chmod 0644 -- debian/python-escript-doc/DEBIAN/control + chown 0:0 -- debian/python-escript-doc/DEBIAN/control chmod 0644 -- debian/python3-escript-mpi/DEBIAN/control chown 0:0 -- debian/python3-escript-mpi/DEBIAN/control chmod 0644 -- debian/python3-escript/DEBIAN/control chown 0:0 -- debian/python3-escript/DEBIAN/control -dpkg-gencontrol: warning: package python-escript-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined - chmod 0644 -- debian/python-escript-doc/DEBIAN/control - chown 0:0 -- debian/python-escript-doc/DEBIAN/control dh_md5sums -O-v install -m0755 -d debian/python3-escript/DEBIAN - install -m0755 -d debian/python-escript-doc/DEBIAN install -m0755 -d debian/python3-escript-mpi/DEBIAN + install -m0755 -d debian/python-escript-doc/DEBIAN + cd debian/python3-escript >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python-escript-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-escript-mpi >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/python3-escript >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - chmod 0644 -- debian/python3-escript-mpi/DEBIAN/md5sums - chown 0:0 -- debian/python3-escript-mpi/DEBIAN/md5sums - install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN chmod 0644 -- debian/python3-escript/DEBIAN/md5sums chown 0:0 -- debian/python3-escript/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-escript/dbgsym-root/DEBIAN - cd debian/.debhelper/python3-escript-mpi/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/python3-escript/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + chmod 0644 -- debian/python3-escript-mpi/DEBIAN/md5sums + chown 0:0 -- debian/python3-escript-mpi/DEBIAN/md5sums + install -m0755 -d debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN + cd debian/.debhelper/python3-escript-mpi/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-escript-mpi/dbgsym-root/DEBIAN/md5sums - chmod 0644 -- debian/python-escript-doc/DEBIAN/md5sums - chown 0:0 -- debian/python-escript-doc/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-escript/dbgsym-root/DEBIAN/md5sums + chmod 0644 -- debian/python-escript-doc/DEBIAN/md5sums + chown 0:0 -- debian/python-escript-doc/DEBIAN/md5sums dh_builddeb -O-v + dpkg-deb --build debian/python3-escript .. + dpkg-deb --root-owner-group --build debian/.debhelper/python3-escript/dbgsym-root .. dpkg-deb --build debian/python3-escript-mpi .. dpkg-deb --build debian/python-escript-doc .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-escript-mpi/dbgsym-root .. - dpkg-deb --root-owner-group --build debian/.debhelper/python3-escript/dbgsym-root .. - dpkg-deb --build debian/python3-escript .. -dpkg-deb: building package 'python3-escript-mpi' in '../python3-escript-mpi_5.6-4_amd64.deb'. dpkg-deb: building package 'python3-escript-dbgsym' in '../python3-escript-dbgsym_5.6-4_amd64.deb'. -dpkg-deb: building package 'python3-escript-mpi-dbgsym' in '../python3-escript-mpi-dbgsym_5.6-4_amd64.deb'. -dpkg-deb: building package 'python-escript-doc' in '../python-escript-doc_5.6-4_all.deb'. +dpkg-deb: building package 'python3-escript-mpi' in '../python3-escript-mpi_5.6-4_amd64.deb'. dpkg-deb: building package 'python3-escript' in '../python3-escript_5.6-4_amd64.deb'. +dpkg-deb: building package 'python-escript-doc' in '../python-escript-doc_5.6-4_all.deb'. +dpkg-deb: building package 'python3-escript-mpi-dbgsym' in '../python3-escript-mpi-dbgsym_5.6-4_amd64.deb'. dpkg-genbuildinfo --build=binary -O../python-escript_5.6-4_amd64.buildinfo dpkg-genchanges --build=binary -O../python-escript_5.6-4_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -37113,12 +37149,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1156224/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1619213 and its subdirectories -I: Current time: Sat Jan 27 02:27:22 -12 2024 -I: pbuilder-time-stamp: 1706365642 +I: removing directory /srv/workspace/pbuilder/1156224 and its subdirectories +I: Current time: Sat Mar 1 12:50:00 +14 2025 +I: pbuilder-time-stamp: 1740783000