Diff of the two buildlogs: -- --- b1/build.log 2023-04-15 00:20:55.409218369 +0000 +++ b2/build.log 2023-04-15 01:24:11.208714302 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu May 16 18:33:19 -12 2024 -I: pbuilder-time-stamp: 1715927599 +I: Current time: Sat Apr 15 14:20:59 +14 2023 +I: pbuilder-time-stamp: 1681518059 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./seqan-raptor_2.0.0.0.git.fecfbca+ds.orig.tar.xz] I: copying [./seqan-raptor_2.0.0.0.git.fecfbca+ds-3.debian.tar.xz] I: Extracting source -gpgv: Signature made Tue Nov 1 00:01:05 2022 -12 +gpgv: Signature made Wed Nov 2 02:01:05 2022 +14 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./seqan-raptor_2.0.0.0.git.fecfbca+ds-3.dsc: no acceptable signature found @@ -33,135 +33,144 @@ dpkg-source: info: applying debian_xxhash I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3467103/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +lrwxrwxrwx 1 root root 4 Jan 6 03:20 /bin/sh -> dash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME='pbuilder2' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='amd64' IFS=' ' - INVOCATION_ID='4917b8c88c0845e39c2c228cf1035adc' + INVOCATION_ID='4f6db6ce9ed84785bb7240ff15e233fe' LANG='C' - LANGUAGE='en_US:en' + LANGUAGE='et_EE:et' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' + PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' - PPID='3467103' + PPID='837095' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.fLFki9az/pbuilderrc_uK3z --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.fLFki9az/b1 --logfile b1/build.log seqan-raptor_2.0.0.0.git.fecfbca+ds-3.dsc' - SUDO_GID='111' - SUDO_UID='106' + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.fLFki9az/pbuilderrc_WXjl --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.fLFki9az/b2 --logfile b2/build.log --extrapackages usrmerge seqan-raptor_2.0.0.0.git.fecfbca+ds-3.dsc' + SUDO_GID='110' + SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' + TZ='/usr/share/zoneinfo/Etc/GMT-14' USER='root' _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + http_proxy='http://78.137.99.97:3128' I: uname -a - Linux ionos15-amd64 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux I: ls -l /bin total 5632 - -rwxr-xr-x 1 root root 1265648 Feb 12 2023 bash - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2 - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep - -rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2 - -rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore - -rwxr-xr-x 1 root root 44016 Sep 20 2022 cat - -rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp - -rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod - -rwxr-xr-x 1 root root 72752 Sep 20 2022 chown - -rwxr-xr-x 1 root root 151152 Sep 20 2022 cp - -rwxr-xr-x 1 root root 125640 Jan 5 2023 dash - -rwxr-xr-x 1 root root 121904 Sep 20 2022 date - -rwxr-xr-x 1 root root 89240 Sep 20 2022 dd - -rwxr-xr-x 1 root root 102200 Sep 20 2022 df - -rwxr-xr-x 1 root root 151344 Sep 20 2022 dir - -rwxr-xr-x 1 root root 88656 Mar 22 2023 dmesg - lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname - -rwxr-xr-x 1 root root 43856 Sep 20 2022 echo - -rwxr-xr-x 1 root root 41 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 35664 Sep 20 2022 false - -rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 85600 Mar 22 2023 findmnt - -rwsr-xr-x 1 root root 35128 Mar 22 2023 fusermount - -rwxr-xr-x 1 root root 203152 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22680 Dec 19 2022 hostname - -rwxr-xr-x 1 root root 72824 Sep 20 2022 ln - -rwxr-xr-x 1 root root 53024 Mar 23 2023 login - -rwxr-xr-x 1 root root 151344 Sep 20 2022 ls - -rwxr-xr-x 1 root root 207168 Mar 22 2023 lsblk - -rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir - -rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod - -rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp - -rwxr-xr-x 1 root root 59712 Mar 22 2023 more - -rwsr-xr-x 1 root root 59704 Mar 22 2023 mount - -rwxr-xr-x 1 root root 18744 Mar 22 2023 mountpoint - -rwxr-xr-x 1 root root 142968 Sep 20 2022 mv - lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 2 2023 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd - lrwxrwxrwx 1 root root 4 Feb 12 2023 rbash -> bash - -rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink - -rwxr-xr-x 1 root root 72752 Sep 20 2022 rm - -rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 27560 Nov 2 2022 run-parts - -rwxr-xr-x 1 root root 126424 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash - -rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep - -rwxr-xr-x 1 root root 85008 Sep 20 2022 stty - -rwsr-xr-x 1 root root 72000 Mar 22 2023 su - -rwxr-xr-x 1 root root 39824 Sep 20 2022 sync - -rwxr-xr-x 1 root root 531984 Apr 6 2023 tar - -rwxr-xr-x 1 root root 14520 Nov 2 2022 tempfile - -rwxr-xr-x 1 root root 109616 Sep 20 2022 touch - -rwxr-xr-x 1 root root 35664 Sep 20 2022 true - -rwxr-xr-x 1 root root 14568 Mar 22 2023 ulockmgr_server - -rwsr-xr-x 1 root root 35128 Mar 22 2023 umount - -rwxr-xr-x 1 root root 43888 Sep 20 2022 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir - -rwxr-xr-x 1 root root 72024 Mar 22 2023 wdctl - lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/3467103/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1265648 Feb 13 10:05 bash + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bunzip2 + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzcat + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep + -rwxr-xr-x 3 root root 39224 Sep 19 2022 bzip2 + -rwxr-xr-x 1 root root 14568 Sep 19 2022 bzip2recover + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore + -rwxr-xr-x 1 root root 44016 Sep 21 2022 cat + -rwxr-xr-x 1 root root 68656 Sep 21 2022 chgrp + -rwxr-xr-x 1 root root 64496 Sep 21 2022 chmod + -rwxr-xr-x 1 root root 72752 Sep 21 2022 chown + -rwxr-xr-x 1 root root 151152 Sep 21 2022 cp + -rwxr-xr-x 1 root root 125640 Jan 6 03:20 dash + -rwxr-xr-x 1 root root 121904 Sep 21 2022 date + -rwxr-xr-x 1 root root 89240 Sep 21 2022 dd + -rwxr-xr-x 1 root root 102200 Sep 21 2022 df + -rwxr-xr-x 1 root root 151344 Sep 21 2022 dir + -rwxr-xr-x 1 root root 88656 Mar 24 00:02 dmesg + lrwxrwxrwx 1 root root 8 Dec 20 03:33 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Dec 20 03:33 domainname -> hostname + -rwxr-xr-x 1 root root 43856 Sep 21 2022 echo + -rwxr-xr-x 1 root root 41 Jan 25 04:43 egrep + -rwxr-xr-x 1 root root 35664 Sep 21 2022 false + -rwxr-xr-x 1 root root 41 Jan 25 04:43 fgrep + -rwxr-xr-x 1 root root 85600 Mar 24 00:02 findmnt + -rwsr-xr-x 1 root root 35128 Mar 23 22:35 fusermount + -rwxr-xr-x 1 root root 203152 Jan 25 04:43 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98136 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22680 Dec 20 03:33 hostname + -rwxr-xr-x 1 root root 72824 Sep 21 2022 ln + -rwxr-xr-x 1 root root 53024 Mar 24 02:40 login + -rwxr-xr-x 1 root root 151344 Sep 21 2022 ls + -rwxr-xr-x 1 root root 207168 Mar 24 00:02 lsblk + -rwxr-xr-x 1 root root 97552 Sep 21 2022 mkdir + -rwxr-xr-x 1 root root 72912 Sep 21 2022 mknod + -rwxr-xr-x 1 root root 43952 Sep 21 2022 mktemp + -rwxr-xr-x 1 root root 59712 Mar 24 00:02 more + -rwsr-xr-x 1 root root 59704 Mar 24 00:02 mount + -rwxr-xr-x 1 root root 18744 Mar 24 00:02 mountpoint + -rwxr-xr-x 1 root root 142968 Sep 21 2022 mv + lrwxrwxrwx 1 root root 8 Dec 20 03:33 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 3 20:25 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43952 Sep 21 2022 pwd + lrwxrwxrwx 1 root root 4 Feb 13 10:05 rbash -> bash + -rwxr-xr-x 1 root root 52112 Sep 21 2022 readlink + -rwxr-xr-x 1 root root 72752 Sep 21 2022 rm + -rwxr-xr-x 1 root root 56240 Sep 21 2022 rmdir + -rwxr-xr-x 1 root root 27560 Nov 3 06:31 run-parts + -rwxr-xr-x 1 root root 126424 Jan 6 09:55 sed + lrwxrwxrwx 1 root root 4 Jan 6 03:20 sh -> dash + -rwxr-xr-x 1 root root 43888 Sep 21 2022 sleep + -rwxr-xr-x 1 root root 85008 Sep 21 2022 stty + -rwsr-xr-x 1 root root 72000 Mar 24 00:02 su + -rwxr-xr-x 1 root root 39824 Sep 21 2022 sync + -rwxr-xr-x 1 root root 531984 Apr 7 04:25 tar + -rwxr-xr-x 1 root root 14520 Nov 3 06:31 tempfile + -rwxr-xr-x 1 root root 109616 Sep 21 2022 touch + -rwxr-xr-x 1 root root 35664 Sep 21 2022 true + -rwxr-xr-x 1 root root 14568 Mar 23 22:35 ulockmgr_server + -rwsr-xr-x 1 root root 35128 Mar 24 00:02 umount + -rwxr-xr-x 1 root root 43888 Sep 21 2022 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 151344 Sep 21 2022 vdir + -rwxr-xr-x 1 root root 72024 Mar 24 00:02 wdctl + lrwxrwxrwx 1 root root 8 Dec 20 03:33 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -386,7 +395,7 @@ Get: 157 http://deb.debian.org/debian bookworm/main amd64 texlive-pictures all 2022.20230122-3 [15.8 MB] Get: 158 http://deb.debian.org/debian bookworm/main amd64 texlive-latex-extra all 2022.20230122-3 [19.2 MB] Get: 159 http://deb.debian.org/debian bookworm/main amd64 texlive-plain-generic all 2022.20230122-3 [28.9 MB] -Fetched 247 MB in 3s (78.8 MB/s) +Fetched 247 MB in 8s (32.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package poppler-data. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19596 files and directories currently installed.) @@ -1057,8 +1066,19 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqan-raptor_2.0.0.0.git.fecfbca+ds-3_source.changes +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +removed '/etc/unsupported-skip-usrmerge-conversion' +The system has been successfully converted. +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../seqan-raptor_2.0.0.0.git.fecfbca+ds-3_source.changes dpkg-buildpackage: info: source package seqan-raptor dpkg-buildpackage: info: source version 2.0.0.0.git.fecfbca+ds-3 dpkg-buildpackage: info: source distribution unstable @@ -1123,7 +1143,7 @@ debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds' dh_auto_build --arch - cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/seqan-raptor-2.0.0.0.git.fecfbca+ds -B/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/CMakeFiles /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -1191,41 +1211,41 @@ [ 0%] Built target xxhash_project make -f src/CMakeFiles/chopper_count_lib.dir/build.make src/CMakeFiles/chopper_count_lib.dir/depend make -f src/CMakeFiles/chopper_layout_lib.dir/build.make src/CMakeFiles/chopper_layout_lib.dir/depend -make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/depend make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper_count_lib.dir/DependInfo.cmake --color= +make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/depend make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/DependInfo.cmake --color= -make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/measure_hyperloglog.dir/DependInfo.cmake --color= -make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -make -f src/CMakeFiles/chopper_count_lib.dir/build.make src/CMakeFiles/chopper_count_lib.dir/build -make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' make -f src/CMakeFiles/chopper_layout_lib.dir/build.make src/CMakeFiles/chopper_layout_lib.dir/build -make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/build +make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' +make -f src/CMakeFiles/chopper_count_lib.dir/build.make src/CMakeFiles/chopper_count_lib.dir/build make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/measure_hyperloglog.dir/DependInfo.cmake --color= make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -[ 12%] Building CXX object src/CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o -[ 25%] Building CXX object src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -[ 37%] Building CXX object src/CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/../include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/lemon/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/simde/simde -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -w -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o -MF CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o.d -o CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/chopper_count.cpp +[ 12%] Building CXX object src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/../include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/lemon/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/simde/simde -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -w -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -MF CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d -o CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/chopper_layout.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/../include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/lemon/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/simde/simde -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -w -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o -MF CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o.d -o CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/measure_hyperloglog.cpp -[ 50%] Linking CXX static library ../lib/libchopper_count_lib.a -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_count_lib.dir/cmake_clean_target.cmake -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_count_lib.dir/link.txt --verbose=1 -/usr/bin/ar qc ../lib/libchopper_count_lib.a CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o -/usr/bin/ranlib ../lib/libchopper_count_lib.a +[ 25%] Building CXX object src/CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/../include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/lemon/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/simde/simde -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -w -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o -MF CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o.d -o CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/chopper_count.cpp make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -[ 50%] Built target chopper_count_lib +make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/build +make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' +[ 37%] Building CXX object src/CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/../include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/lemon/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/simde/simde -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -w -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o -MF CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o.d -o CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src/measure_hyperloglog.cpp +[ 62%] Linking CXX static library ../lib/libchopper_count_lib.a [ 62%] Linking CXX static library ../lib/libchopper_layout_lib.a cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_layout_lib.dir/cmake_clean_target.cmake +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_count_lib.dir/cmake_clean_target.cmake cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_layout_lib.dir/link.txt --verbose=1 +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_count_lib.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/libchopper_layout_lib.a CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o +/usr/bin/ar qc ../lib/libchopper_count_lib.a CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o +/usr/bin/ranlib ../lib/libchopper_count_lib.a /usr/bin/ranlib ../lib/libchopper_layout_lib.a make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' +[ 62%] Built target chopper_count_lib +make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' [ 62%] Built target chopper_layout_lib make -f src/CMakeFiles/chopper.dir/build.make src/CMakeFiles/chopper.dir/depend make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' @@ -1267,40 +1287,40 @@ [ 0%] Built target xxhash_project make -f src/CMakeFiles/chopper_count_lib.dir/build.make src/CMakeFiles/chopper_count_lib.dir/depend make -f src/CMakeFiles/chopper_layout_lib.dir/build.make src/CMakeFiles/chopper_layout_lib.dir/depend -make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/depend make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper_count_lib.dir/DependInfo.cmake --color= make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/DependInfo.cmake --color= +make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/depend make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/measure_hyperloglog.dir/DependInfo.cmake --color= -Dependencies file "src/CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o.d" is newer than depends file "/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/measure_hyperloglog.dir/compiler_depend.internal". Dependencies file "src/CMakeFiles/chopper_count_lib.dir/chopper_count.cpp.o.d" is newer than depends file "/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper_count_lib.dir/compiler_depend.internal". -Dependencies file "src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d" is newer than depends file "/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/compiler_depend.internal". -Consolidate compiler generated dependencies of target measure_hyperloglog -make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/build -Consolidate compiler generated dependencies of target chopper_layout_lib Consolidate compiler generated dependencies of target chopper_count_lib make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -make -f src/CMakeFiles/chopper_layout_lib.dir/build.make src/CMakeFiles/chopper_layout_lib.dir/build -make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' make -f src/CMakeFiles/chopper_count_lib.dir/build.make src/CMakeFiles/chopper_count_lib.dir/build +Dependencies file "src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d" is newer than depends file "/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/compiler_depend.internal". +Dependencies file "src/CMakeFiles/measure_hyperloglog.dir/measure_hyperloglog.cpp.o.d" is newer than depends file "/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/measure_hyperloglog.dir/compiler_depend.internal". +Consolidate compiler generated dependencies of target chopper_layout_lib make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -make[7]: Nothing to be done for 'src/CMakeFiles/measure_hyperloglog.dir/build'. +make[7]: Nothing to be done for 'src/CMakeFiles/chopper_count_lib.dir/build'. +make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' +make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' +make -f src/CMakeFiles/chopper_layout_lib.dir/build.make src/CMakeFiles/chopper_layout_lib.dir/build +Consolidate compiler generated dependencies of target measure_hyperloglog make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' +make -f src/CMakeFiles/measure_hyperloglog.dir/build.make src/CMakeFiles/measure_hyperloglog.dir/build make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' make[7]: Nothing to be done for 'src/CMakeFiles/chopper_layout_lib.dir/build'. make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -make[7]: Nothing to be done for 'src/CMakeFiles/chopper_count_lib.dir/build'. +make[7]: Nothing to be done for 'src/CMakeFiles/measure_hyperloglog.dir/build'. make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' -[ 25%] Built target measure_hyperloglog +[ 25%] Built target chopper_count_lib [ 50%] Built target chopper_layout_lib -[ 75%] Built target chopper_count_lib make -f src/CMakeFiles/chopper.dir/build.make src/CMakeFiles/chopper.dir/depend make[7]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper.dir/DependInfo.cmake --color= +[ 75%] Built target measure_hyperloglog Dependencies file "src/CMakeFiles/chopper.dir/chopper.cpp.o.d" is newer than depends file "/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build/src/CMakeFiles/chopper.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target chopper make[7]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/chopper_project/src/chopper_project-build' @@ -1333,82 +1353,81 @@ make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/depend make -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/depend make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/depend -make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/depend -make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/depend make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/upgrade /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade/CMakeFiles/raptor_upgrade.dir/DependInfo.cmake --color= +make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/depend +make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/CMakeFiles/raptor_build.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/CMakeFiles/raptor_build.dir/DependInfo.cmake --color= +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf/CMakeFiles/raptor_build_hibf.dir/DependInfo.cmake --color= +make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/depend make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search/CMakeFiles/raptor_search.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold/CMakeFiles/raptor_threshold.dir/DependInfo.cmake --color= -make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/seqan-raptor-2.0.0.0.git.fecfbca+ds /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf/CMakeFiles/raptor_build_hibf.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build -make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +make -f src/upgrade/CMakeFiles/raptor_upgrade.dir/build.make src/upgrade/CMakeFiles/raptor_upgrade.dir/build make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -make -f src/upgrade/CMakeFiles/raptor_upgrade.dir/build.make src/upgrade/CMakeFiles/raptor_upgrade.dir/build -make -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build -make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/build -make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build +make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build +make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/build +make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +make -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build +make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build make[4]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +[ 16%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o +[ 18%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -MF CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/raptor_search.cpp +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/bin_size_in_bits.cpp +make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build +[ 20%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o +[ 22%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/__/build/hibf/parse_chopper_pack_line.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. 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-I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/search_hibf.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong 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-I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/build_parsing.cpp +[ 30%] Building CXX object src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem 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src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/init_shared_meta.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -MF CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/raptor_search.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/bin_size_in_bits.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 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src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -MF CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o.d -o CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/upgrade/raptor_upgrade.cpp +[ 34%] Building CXX object src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o +[ 28%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/chopper_build.cpp cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -MF CMakeFiles/raptor_build.dir/raptor_build.cpp.o.d -o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/raptor_build.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/build_parsing.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/search_parsing.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/upgrade_parsing.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/multiple_error_model.cpp -[ 46%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/pascal_row.cpp -[ 48%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 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-DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/precompute_correction.cpp -[ 53%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/precompute_threshold.cpp -[ 55%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o +[ 36%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o +[ 38%] Building CXX object src/build/CMakeFiles/raptor_build.dir/compute_minimiser.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/CMakeFiles/raptor_build.dir/compute_minimiser.cpp.o -MF CMakeFiles/raptor_build.dir/compute_minimiser.cpp.o.d -o CMakeFiles/raptor_build.dir/compute_minimiser.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/compute_minimiser.cpp +[ 40%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/compute_kmers.cpp cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_ibf.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/search_ibf.cpp -[ 57%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_multiple.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/search_multiple.cpp.o -MF CMakeFiles/raptor_search.dir/search_multiple.cpp.o.d -o CMakeFiles/raptor_search.dir/search_multiple.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/search_multiple.cpp -[ 59%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/chopper_build.cpp +[ 42%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o +[ 44%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/one_indirect_error_model.cpp +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/construct_ibf.cpp +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp +In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:8: +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] + 20 | : public T, public std::iterator { + | ^~~~~~~~ +In file included from /usr/include/c++/12/bits/stl_algobase.h:65, + from /usr/include/c++/12/vector:60, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/core.h:45, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: +/usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here + 127 | struct _GLIBCXX17_DEPRECATED iterator + | ^~~~~~~~ In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/chopper_build.cpp:8: @@ -1422,21 +1441,6 @@ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ -[ 61%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/compute_kmers.cpp -[ 63%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_socks.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/search_socks.cpp.o -MF CMakeFiles/raptor_search.dir/search_socks.cpp.o.d -o CMakeFiles/raptor_search.dir/search_socks.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/search_socks.cpp -[ 65%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/construct_ibf.cpp -[ 67%] Linking CXX static library ../../lib/libraptor_threshold.a -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -/usr/bin/ranlib ../../lib/libraptor_threshold.a -make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -[ 67%] Built target raptor_threshold -[ 69%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/construct_ibf.cpp:8: @@ -1450,9 +1454,15 @@ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ +[ 46%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/init_shared_meta.cpp +[ 48%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/hierarchical_build.cpp +[ 51%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_multiple.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/search_multiple.cpp.o -MF CMakeFiles/raptor_search.dir/search_multiple.cpp.o.d -o CMakeFiles/raptor_search.dir/search_multiple.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/search_multiple.cpp In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:8: + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/hierarchical_build.cpp:8: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1464,6 +1474,18 @@ 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:11, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:10: +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] + 22 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: the default value for the current CPU tuning is 64 bytes +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’ +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] + 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:11, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/chopper_build.cpp:11: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 22 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; @@ -1487,8 +1509,18 @@ /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:11, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:10: +[ 53%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/multiple_error_model.cpp +[ 55%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/parse_bin_path.cpp +[ 57%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/pascal_row.cpp +[ 59%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/one_error_model.cpp +[ 61%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/initialise_max_bin_kmers.cpp +In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/construct_ibf.hpp:13, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/hierarchical_build.cpp:11: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 22 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1499,11 +1531,11 @@ /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 71%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/hierarchical_build.cpp +[ 63%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/precompute_correction.cpp In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/hierarchical_build.cpp:8: + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/initialise_max_bin_kmers.cpp:8: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1514,24 +1546,27 @@ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ -[ 73%] Linking CXX static library ../../lib/libraptor_upgrade.a -[ 75%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/initialise_max_bin_kmers.cpp -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -/usr/bin/ranlib ../../lib/libraptor_upgrade.a -make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -[ 75%] Built target raptor_upgrade -[ 77%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o +[ 65%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/insert_into_ibf.cpp -[ 79%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o +[ 67%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/loop_over_children.cpp -[ 81%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_header.cpp +[ 69%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/threshold/precompute_threshold.cpp +In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/hierarchical_build.hpp:13, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/initialise_max_bin_kmers.cpp:11: +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] + 22 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: the default value for the current CPU tuning is 64 bytes +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’ +/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] + 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/initialise_max_bin_kmers.cpp:8: + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/loop_over_children.cpp:8: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1542,57 +1577,59 @@ /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ +[ 71%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/search_parsing.cpp +[ 73%] Linking CXX static library ../../lib/libraptor_upgrade.a +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o +/usr/bin/ranlib ../../lib/libraptor_upgrade.a +make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +[ 73%] Built target raptor_upgrade +[ 75%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_header.cpp +[ 77%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_line.cpp +[ 79%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/read_chopper_pack_file.cpp In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/loop_over_children.cpp:8: + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_header.cpp:12: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, - from /usr/include/c++/12/vector:60, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/core.h:45, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: + from /usr/include/c++/12/algorithm:60, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_header.cpp:8: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_header.cpp:12: + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/read_chopper_pack_file.cpp:8: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/12/bits/stl_algobase.h:65, - from /usr/include/c++/12/algorithm:60, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_header.cpp:8: + from /usr/include/c++/12/vector:60, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/core.h:45, + from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 127 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ -In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/construct_ibf.hpp:13, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/hierarchical_build.cpp:11: -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] - 22 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: the default value for the current CPU tuning is 64 bytes -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’ -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] - 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 83%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/parse_chopper_pack_line.cpp -In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/hierarchical_build.hpp:13, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/initialise_max_bin_kmers.cpp:11: -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] - 22 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: its value can vary between compiler versions or with different ‘-mtune’ or ‘-mcpu’ flags -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: if this use is part of a public ABI, change it to instead use a constant variable you define -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: the default value for the current CPU tuning is 64 bytes -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: note: you can stabilize this value with ‘--param hardware_destructive_interference_size=64’, or disable this warning with ‘-Wno-interference-size’ -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] - 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 81%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/update_user_bins.cpp +[ 83%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"2021-08-20--no-git\" -DRAPTOR_VERSION="\"2.0.1 (74f815358db47037e93a56b826a9df3692e55680--no-git)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/argument_parsing/upgrade_parsing.cpp +[ 85%] Linking CXX static library ../../lib/libraptor_threshold.a +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o +/usr/bin/ranlib ../../lib/libraptor_threshold.a +make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +[ 85%] Built target raptor_threshold +[ 87%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_socks.cpp.o +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/search/CMakeFiles/raptor_search.dir/search_socks.cpp.o -MF CMakeFiles/raptor_search.dir/search_socks.cpp.o.d -o CMakeFiles/raptor_search.dir/search_socks.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/search/search_socks.cpp In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/hierarchical_build.hpp:13, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/loop_over_children.cpp:12: /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:22:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] @@ -1605,23 +1642,6 @@ /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 85%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/read_chopper_pack_file.cpp -[ 87%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSEQAN3_WITH_CEREAL=1 -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/chopper/include -isystem /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/robin-hood-hashing/src/include -g -O2 -ffile-prefix-map=/build/seqan-raptor-2.0.0.0.git.fecfbca+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/sharg-parser/include/ -I/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/ -mpopcnt -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -pedantic -Wall -Wextra -std=c++20 -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/update_user_bins.cpp -In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/read_chopper_pack_file.cpp:8: -/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] - 20 | : public T, public std::iterator { - | ^~~~~~~~ -In file included from /usr/include/c++/12/bits/stl_algobase.h:65, - from /usr/include/c++/12/vector:60, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/core.h:45, - from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: -/usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here - 127 | struct _GLIBCXX17_DEPRECATED iterator - | ^~~~~~~~ In file included from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, from /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/build/hibf/update_user_bins.cpp:8: @@ -1659,20 +1679,20 @@ /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/src/../include/raptor/build/hibf/build_data.hpp:23:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 23 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 89%] Linking CXX static library ../../lib/libraptor_build.a -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -P CMakeFiles/raptor_build.dir/cmake_clean_target.cmake -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_from_minimiser.cpp.o CMakeFiles/raptor_build.dir/compute_minimiser.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -/usr/bin/ranlib ../../lib/libraptor_build.a -make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -[ 89%] Built target raptor_build -[ 91%] Linking CXX static library ../../../lib/libraptor_build_hibf.a +[ 89%] Linking CXX static library ../../../lib/libraptor_build_hibf.a cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/cmake -P CMakeFiles/raptor_build_hibf.dir/cmake_clean_target.cmake cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build_hibf.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/initialise_max_bin_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o /usr/bin/ranlib ../../../lib/libraptor_build_hibf.a make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' -[ 91%] Built target raptor_build_hibf +[ 89%] Built target raptor_build_hibf +[ 91%] Linking CXX static library ../../lib/libraptor_build.a +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -P CMakeFiles/raptor_build.dir/cmake_clean_target.cmake +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_from_minimiser.cpp.o CMakeFiles/raptor_build.dir/compute_minimiser.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o +/usr/bin/ranlib ../../lib/libraptor_build.a +make[4]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' +[ 91%] Built target raptor_build [ 93%] Linking CXX static library ../../lib/libraptor_search.a cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1 @@ -6091,10 +6111,10 @@ make[2]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/doc/latex' make[1]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds' dh_auto_test - cd obj-x86_64-linux-gnu && make -j16 test ARGS\+=--verbose ARGS\+=-j16 + cd obj-x86_64-linux-gnu && make -j15 test ARGS\+=--verbose ARGS\+=-j15 make[1]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j16 +/usr/bin/ctest --force-new-ctest-process --verbose -j15 UpdateCTestConfiguration from :/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu @@ -6402,8 +6422,8 @@ gmake[3]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' gmake[2]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/test' gmake[2]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/test' -cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/rule gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. +cd /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/rule gmake[3]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/seqan-raptor-2.0.0.0.git.fecfbca+ds -B/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu/CMakeFiles 79 @@ -6731,26 +6751,21 @@ 1: [----------] Global test environment set-up. 1: [----------] 1 test from issue 1: [ RUN ] issue.142 -1: [ OK ] issue.142 (10 ms) -1: [----------] 1 test from issue (10 ms total) +1: [ OK ] issue.142 (58 ms) +1: [----------] 1 test from issue (58 ms total) 1: 1: [----------] Global test environment tear-down -1: [==========] 1 test from 1 test suite ran. (10 ms total) +1: [==========] 1 test from 1 test suite ran. (58 ms total) 1: [ PASSED ] 1 test. 2: Running main() from /usr/src/googletest/googletest/src/gtest_main.cc 2: [==========] Running 28 tests from 4 test suites. 2: [----------] Global test environment set-up. 2: [----------] 3 tests from argparse_main 2: [ RUN ] argparse_main.no_options -2: [ OK ] argparse_main.no_options (4 ms) +2: [ OK ] argparse_main.no_options (45 ms) 2: [ RUN ] argparse_main.no_subparser -2: [ OK ] argparse_main.no_subparser (8 ms) +2: [ OK ] argparse_main.no_subparser (73 ms) 2: [ RUN ] argparse_main.unknown_option -2: [ OK ] argparse_main.unknown_option (10 ms) -2: [----------] 3 tests from argparse_main (23 ms total) -2: -2: [----------] 16 tests from argparse_build -2: [ RUN ] argparse_build.no_options 3: Running main() from /usr/src/googletest/googletest/src/gtest_main.cc 3: [==========] Running 1 test from 1 test suite. 3: [----------] Global test environment set-up. @@ -6766,8 +6781,8 @@ 5: [----------] Global test environment set-up. 5: [----------] 1 test from build_ibf_compressed 5: [ RUN ] build_ibf_compressed.wrong_compression -5: [ OK ] build_ibf_compressed.wrong_compression (0 ms) -5: [----------] 1 test from build_ibf_compressed (0 ms total) +5: [ OK ] build_ibf_compressed.wrong_compression (54 ms) +5: [----------] 1 test from build_ibf_compressed (54 ms total) 5: 5: [----------] 48 tests from build_ibf_compressed_suite/build_ibf_compressed 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error @@ -6781,7 +6796,7 @@ 7: [----------] Global test environment set-up. 7: [----------] 36 tests from build_ibf_suite/build_ibf 7: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel -7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel (11 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel (81 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial 8: Running main() from /usr/src/googletest/googletest/src/gtest_main.cc 8: [==========] Running 37 tests from 2 test suites. @@ -6803,325 +6818,274 @@ 11: [----------] Global test environment set-up. 11: [----------] 1 test from search_ibf 11: [ RUN ] search_ibf.cache_thresholds - 1/12 Test #1: test/api/issue_142 ................................... Passed 0.03 sec + 1/12 Test #1: test/api/issue_142 ................................... Passed 0.25 sec +2: [ OK ] argparse_main.unknown_option (63 ms) +2: [----------] 3 tests from argparse_main (182 ms total) +2: +2: [----------] 16 tests from argparse_build +2: [ RUN ] argparse_build.no_options 12: Running main() from /usr/src/googletest/googletest/src/gtest_main.cc 12: [==========] Running 3 tests from 1 test suite. 12: [----------] Global test environment set-up. 12: [----------] 3 tests from upgrade 12: [ RUN ] upgrade.ibf -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error (24 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error -2: [ OK ] argparse_build.no_options (8 ms) -2: [ RUN ] argparse_build.input_missing -8: [ OK ] search_hibf.three_levels (25 ms) -8: [----------] 1 test from search_hibf (25 ms total) -8: -8: [----------] 36 tests from search_hibf_suite/search_hibf -8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial (15 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial (72 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel -12: [ OK ] upgrade.ibf (13 ms) -12: [ RUN ] upgrade.compressed_ibf -2: [ OK ] argparse_build.input_missing (9 ms) +2: [ OK ] argparse_build.no_options (51 ms) +2: [ RUN ] argparse_build.input_missing +2: [ OK ] argparse_build.input_missing (34 ms) 2: [ RUN ] argparse_build.input_invalid -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (27 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error -3: [ OK ] build_hibf_chopper.pipeline (45 ms) -3: [----------] 1 test from build_hibf_chopper (45 ms total) -3: -3: [----------] Global test environment tear-down -3: [==========] 1 test from 1 test suite ran. (45 ms total) -3: [ PASSED ] 1 test. - 2/12 Test #3: test/cli/build/cli_build_hibf_chopper_test ........... Passed 0.05 sec -8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error (11 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel (11 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel (45 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial -12: [ OK ] upgrade.compressed_ibf (10 ms) -12: [ RUN ] upgrade.partitioned_ibf -2: [ OK ] argparse_build.input_invalid (11 ms) +12: [ OK ] upgrade.ibf (99 ms) +12: [ RUN ] upgrade.compressed_ibf +2: [ OK ] argparse_build.input_invalid (20 ms) 2: [ RUN ] argparse_build.output_missing -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error (25 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error -7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial (10 ms) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error (216 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error +2: [ OK ] argparse_build.output_missing (12 ms) +2: [ RUN ] argparse_build.directory_missing +2: [ OK ] argparse_build.directory_missing (41 ms) +2: [ RUN ] argparse_build.alias +12: [ OK ] upgrade.compressed_ibf (65 ms) +12: [ RUN ] upgrade.partitioned_ibf +7: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial (81 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel -10: [ OK ] search_ibf_preprocessing.pipeline_compressed_index (41 ms) -10: [----------] 1 test from search_ibf_preprocessing (41 ms total) +3: [ OK ] build_hibf_chopper.pipeline (355 ms) +3: [----------] 1 test from build_hibf_chopper (355 ms total) +3: +3: [----------] Global test environment tear-down +3: [==========] 1 test from 1 test suite ran. (355 ms total) +3: [ PASSED ] 1 test. + 2/12 Test #3: test/cli/build/cli_build_hibf_chopper_test ........... Passed 0.40 sec +2: [ OK ] argparse_build.alias (34 ms) +2: [ RUN ] argparse_build.size_missing +10: [ OK ] search_ibf_preprocessing.pipeline_compressed_index (243 ms) +10: [----------] 1 test from search_ibf_preprocessing (243 ms total) 10: 10: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error -8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error (15 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error -2: [ OK ] argparse_build.output_missing (13 ms) -2: [ RUN ] argparse_build.directory_missing -4: [ OK ] build_hibf.three_levels (65 ms) -4: [----------] 1 test from build_hibf (65 ms total) -4: -4: [----------] 24 tests from build_hibf_suite/build_hibf -4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel -2: [ OK ] argparse_build.directory_missing (7 ms) -2: [ RUN ] argparse_build.alias -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (33 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error (25 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error -4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel (12 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial -2: [ OK ] argparse_build.alias (10 ms) -2: [ RUN ] argparse_build.size_missing -7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel (23 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial -2: [ OK ] argparse_build.size_missing (8 ms) +2: [ OK ] argparse_build.size_missing (45 ms) 2: [ RUN ] argparse_build.size_wrong_space -11: [ OK ] search_ibf.cache_thresholds (69 ms) -11: [----------] 1 test from search_ibf (70 ms total) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (295 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error (141 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error +2: [ OK ] argparse_build.size_wrong_space (41 ms) +2: [ RUN ] argparse_build.size_wrong_suffix +11: [ OK ] search_ibf.cache_thresholds (327 ms) +11: [----------] 1 test from search_ibf (327 ms total) 11: 11: [----------] 48 tests from search_ibf_suite/search_ibf 11: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error -4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial (12 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (36 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error -2: [ OK ] argparse_build.size_wrong_space (6 ms) -2: [ RUN ] argparse_build.size_wrong_suffix -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error (19 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error -4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel (8 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial -11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error (11 ms) -11: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error -2: [ OK ] argparse_build.size_wrong_suffix (7 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel (137 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial +2: [ OK ] argparse_build.size_wrong_suffix (43 ms) 2: [ RUN ] argparse_build.kmer_window -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error (30 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error -7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial (29 ms) +2: [ OK ] argparse_build.kmer_window (32 ms) +2: [ RUN ] argparse_build.kmer_shape +11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error (101 ms) +11: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error +2: [ OK ] argparse_build.kmer_shape (54 ms) +2: [ RUN ] argparse_build.zero_threads +7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial (128 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel -4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial (11 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel -12: [ OK ] upgrade.partitioned_ibf (63 ms) -12: [----------] 3 tests from upgrade (87 ms total) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error (187 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error +2: [ OK ] argparse_build.zero_threads (43 ms) +2: [ RUN ] argparse_build.no_bins_in_file +11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error (69 ms) +11: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (238 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (267 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error +2: [ OK ] argparse_build.no_bins_in_file (53 ms) +2: [ RUN ] argparse_build.empty_file_in_bin +12: [ OK ] upgrade.partitioned_ibf (385 ms) +12: [----------] 3 tests from upgrade (550 ms total) 12: 12: [----------] Global test environment tear-down -12: [==========] 3 tests from 1 test suite ran. (87 ms total) +12: [==========] 3 tests from 1 test suite ran. (550 ms total) 12: [ PASSED ] 3 tests. - 3/12 Test #12: test/cli/upgrade/cli_upgrade_test .................... Passed 0.09 sec -2: [ OK ] argparse_build.kmer_window (8 ms) -2: [ RUN ] argparse_build.kmer_shape -8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error (49 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error -11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error (11 ms) -11: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error -6: [ OK ] build_ibf_partitioned.pipeline_misc (112 ms) -6: [----------] 1 test from build_ibf_partitioned (112 ms total) -6: -6: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (31 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error -2: [ OK ] argparse_build.kmer_shape (14 ms) -2: [ RUN ] argparse_build.zero_threads -4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel (19 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial -7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel (20 ms) + 3/12 Test #12: test/cli/upgrade/cli_upgrade_test .................... Passed 0.58 sec +7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel (119 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial -2: [ OK ] argparse_build.zero_threads (8 ms) -2: [ RUN ] argparse_build.no_bins_in_file -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error (34 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error -2: [ OK ] argparse_build.no_bins_in_file (7 ms) -2: [ RUN ] argparse_build.empty_file_in_bin -2: [ OK ] argparse_build.empty_file_in_bin (7 ms) +2: [ OK ] argparse_build.empty_file_in_bin (59 ms) 2: [ RUN ] argparse_build.mixed_input -7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial (19 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel -4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial (27 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel -2: [ OK ] argparse_build.mixed_input (8 ms) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error (147 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error +2: [ OK ] argparse_build.mixed_input (57 ms) 2: [ RUN ] argparse_build.wrong_parts -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error (35 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error -2: [ OK ] argparse_build.wrong_parts (6 ms) -2: [----------] 16 tests from argparse_build (144 ms total) +2: [ OK ] argparse_build.wrong_parts (32 ms) +2: [----------] 16 tests from argparse_build (657 ms total) 2: 2: [----------] 8 tests from argparse_search 2: [ RUN ] argparse_search.no_options -8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error (58 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error -2: [ OK ] argparse_search.no_options (6 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (173 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error +7: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial (117 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel +11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error (205 ms) +11: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error +6: [ OK ] build_ibf_partitioned.pipeline_misc (842 ms) +6: [----------] 1 test from build_ibf_partitioned (842 ms total) +6: +6: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed +2: [ OK ] argparse_search.no_options (49 ms) 2: [ RUN ] argparse_search.ibf_missing -4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel (15 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial -7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel (25 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial -2: [ OK ] argparse_search.ibf_missing (7 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error (229 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error +2: [ OK ] argparse_search.ibf_missing (30 ms) 2: [ RUN ] argparse_search.ibf_wrong -8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error (12 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error (87 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error -11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error (72 ms) -11: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error -2: [ OK ] argparse_search.ibf_wrong (9 ms) +2: [ OK ] argparse_search.ibf_wrong (49 ms) 2: [ RUN ] argparse_search.query_missing -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error (27 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error -4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial (17 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel -8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error (11 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error -2: [ OK ] argparse_search.query_missing (10 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel (150 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial +2: [ OK ] argparse_search.query_missing (50 ms) 2: [ RUN ] argparse_search.query_wrong -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed (83 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed -2: [ OK ] argparse_search.query_wrong (7 ms) +11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error (206 ms) +11: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error +2: [ OK ] argparse_search.query_wrong (51 ms) 2: [ RUN ] argparse_search.output_missing -7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial (34 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel -2: [ OK ] argparse_search.output_missing (8 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error (250 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error +2: [ OK ] argparse_search.output_missing (55 ms) 2: [ RUN ] argparse_search.old_index -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (75 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error -4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel (34 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial -2: [ OK ] argparse_search.old_index (15 ms) -2: [ RUN ] argparse_search.temporary_warning -7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel (21 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial -11: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error (55 ms) -11: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error -8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error (53 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error (63 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error -11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error (12 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error (239 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error +7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial (152 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error (388 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error +11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error (123 ms) 11: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (68 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error -7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial (32 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel -11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error (11 ms) +2: [ OK ] argparse_search.old_index (79 ms) +2: [ RUN ] argparse_search.temporary_warning +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed (423 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed +11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error (115 ms) 11: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error -4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial (48 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel -2: [ OK ] argparse_search.temporary_warning (45 ms) -2: [----------] 8 tests from argparse_search (111 ms total) +7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel (216 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error (303 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error +2: [ OK ] argparse_search.temporary_warning (238 ms) +2: [----------] 8 tests from argparse_search (603 ms total) 2: 2: [----------] 1 test from argparse_upgrade 2: [ RUN ] argparse_upgrade.kmer_window -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed (76 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed -7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel (13 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial -2: [ OK ] argparse_upgrade.kmer_window (6 ms) -2: [----------] 1 test from argparse_upgrade (6 ms total) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (351 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error +2: [ OK ] argparse_upgrade.kmer_window (49 ms) +2: [----------] 1 test from argparse_upgrade (49 ms total) 2: 2: [----------] Global test environment tear-down -2: [==========] 28 tests from 4 test suites ran. (286 ms total) +2: [==========] 28 tests from 4 test suites ran. (1494 ms total) 2: [ PASSED ] 28 tests. -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (68 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error - 4/12 Test #2: test/cli/argument_parsing/cli_options_test ........... Passed 0.30 sec -8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error (51 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error -4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel (26 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial -8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error (11 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial (34 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel -11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error (48 ms) + 4/12 Test #2: test/cli/argument_parsing/cli_options_test ........... Passed 1.55 sec +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error (339 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error +7: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial (165 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel +11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error (240 ms) 11: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error (68 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error -8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error (12 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel (12 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel (69 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial +7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial (77 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel +4: [ OK ] build_hibf.three_levels (1747 ms) +4: [----------] 1 test from build_hibf (1747 ms total) +4: +4: [----------] 24 tests from build_hibf_suite/build_hibf +4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel +7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel (67 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (72 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial (9 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel -4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial (38 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel -4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel (11 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error (72 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel (23 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial -4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial (7 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel -4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel (7 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed (98 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed -4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial (11 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel -7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial (21 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel -11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error (66 ms) +8: [ OK ] search_hibf.three_levels (1663 ms) +8: [----------] 1 test from search_hibf (1663 ms total) +8: +8: [----------] 36 tests from search_hibf_suite/search_hibf +8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error +11: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error (223 ms) 11: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error (72 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error -11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error (9 ms) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error (275 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error +7: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial (32 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed (482 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (407 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error +8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error (75 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (355 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error +4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel (94 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial +11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error (93 ms) 11: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error -8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error (71 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error -4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel (16 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial -11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error (9 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel (130 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial +4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial (75 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel +8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error (119 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error +11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error (102 ms) 11: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel (21 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel (51 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial +4: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial (56 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error (271 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error +7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial (131 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (329 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error (312 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error +7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel (116 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial -4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial (20 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error (87 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error (35 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel (203 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial +11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error (308 ms) +11: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error +8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error (316 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error (239 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error (70 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial (25 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial (139 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel -4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel (21 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial -8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error (55 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error -11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error (49 ms) -11: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel (28 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial (115 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel +7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel (132 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial -4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial (21 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error (36 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed (718 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error (231 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error (15 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (49 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error (11 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial (29 ms) +8: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error (263 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error +4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel (204 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error (420 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error (446 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error +7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial (147 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error (68 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error (8 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed (110 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed -4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel (35 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error (8 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error (37 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error -11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error (52 ms) +11: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error (355 ms) 11: [ RUN ] search_ibf_suite/search_ibf.socks/1_bins_19_window_0_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error (9 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel (22 ms) +8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error (100 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error +4: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial (144 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error (187 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error +7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel (152 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial -11: [ OK ] search_ibf_suite/search_ibf.socks/1_bins_19_window_0_error (8 ms) +11: [ OK ] search_ibf_suite/search_ibf.socks/1_bins_19_window_0_error (112 ms) 11: [ RUN ] search_ibf_suite/search_ibf.socks/1_bins_19_window_1_error 11: ./test/cli/search/cli_search_ibf_test.cpp:40: Skipped 11: SOCKS only supports (k,k)-minimizers @@ -7135,9 +7099,9 @@ 11: SOCKS only supports (k,k)-minimizers 11: [ SKIPPED ] search_ibf_suite/search_ibf.socks/1_bins_23_window_1_error (0 ms) 11: [ RUN ] search_ibf_suite/search_ibf.socks/64_bins_19_window_0_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error (9 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error -11: [ OK ] search_ibf_suite/search_ibf.socks/64_bins_19_window_0_error (7 ms) +8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error (115 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error +11: [ OK ] search_ibf_suite/search_ibf.socks/64_bins_19_window_0_error (115 ms) 11: [ RUN ] search_ibf_suite/search_ibf.socks/64_bins_19_window_1_error 11: ./test/cli/search/cli_search_ibf_test.cpp:40: Skipped 11: SOCKS only supports (k,k)-minimizers @@ -7151,11 +7115,11 @@ 11: SOCKS only supports (k,k)-minimizers 11: [ SKIPPED ] search_ibf_suite/search_ibf.socks/64_bins_23_window_1_error (0 ms) 11: [ RUN ] search_ibf_suite/search_ibf.socks/128_bins_19_window_0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (49 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error (11 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error -11: [ OK ] search_ibf_suite/search_ibf.socks/128_bins_19_window_0_error (8 ms) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error (192 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error +7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial (208 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/1_bins_19_window_parallel +11: [ OK ] search_ibf_suite/search_ibf.socks/128_bins_19_window_0_error (85 ms) 11: [ RUN ] search_ibf_suite/search_ibf.socks/128_bins_19_window_1_error 11: ./test/cli/search/cli_search_ibf_test.cpp:40: Skipped 11: SOCKS only supports (k,k)-minimizers @@ -7169,198 +7133,227 @@ 11: SOCKS only supports (k,k)-minimizers 11: [ SKIPPED ] search_ibf_suite/search_ibf.socks/128_bins_23_window_1_error (0 ms) 11: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error (10 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error -11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error (10 ms) -11: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial (32 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/1_bins_19_window_parallel -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error (38 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (55 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error -4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial (49 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error (11 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error -11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error (12 ms) -11: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_19_window_parallel (11 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (387 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error +8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error (260 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_19_window_parallel (87 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/1_bins_19_window_serial -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_19_window_serial (9 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error (464 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error +11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error (117 ms) +11: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error +4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel (385 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_19_window_serial (83 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/1_bins_23_window_parallel -11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error (10 ms) -11: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error (12 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_23_window_parallel (10 ms) +11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error (130 ms) +11: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_23_window_parallel (87 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/1_bins_23_window_serial -4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel (27 ms) -4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial -11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error (17 ms) -11: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error (19 ms) -8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_23_window_serial (11 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (316 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed (774 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed +11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error (93 ms) +11: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/1_bins_23_window_serial (103 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/64_bins_19_window_parallel -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error (58 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error -11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error (11 ms) +8: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error (318 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error (452 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error +4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial (273 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel +11: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error (101 ms) +11: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error +8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error (107 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (403 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error +11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error (91 ms) 11: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error -8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error (11 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (55 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error (8 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error -11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error (12 ms) -11: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_19_window_parallel (23 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_19_window_parallel (180 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/64_bins_19_window_serial -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error (69 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error -4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial (37 ms) -4: [----------] 24 tests from build_hibf_suite/build_hibf (543 ms total) -4: -4: [----------] Global test environment tear-down -4: [==========] 25 tests from 2 test suites ran. (608 ms total) -4: [ PASSED ] 25 tests. -8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error (9 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error -11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error (11 ms) +8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error (91 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error +11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error (91 ms) +11: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error (364 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_19_window_serial (155 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_parallel +11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error (105 ms) 11: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error - 5/12 Test #4: test/cli/build/cli_build_hibf_test ................... Passed 0.62 sec -11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error (7 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_parallel (111 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_serial +11: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error (98 ms) 11: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error -11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error (8 ms) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error (427 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (360 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error +11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error (108 ms) 11: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error (46 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_serial (176 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_parallel +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error (357 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_19_window_serial (30 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_parallel -11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error (11 ms) +11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error (118 ms) 11: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error -11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error (11 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel (653 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial +8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error (488 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error +11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error (101 ms) 11: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error (55 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error (47 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_parallel (21 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_serial -11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error (11 ms) +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_parallel (184 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_serial +11: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error (123 ms) 11: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error (12 ms) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error (461 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error +4: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial (241 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error (447 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error +4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel (89 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial +11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error (115 ms) 11: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/64_bins_23_window_serial (22 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_parallel -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed (195 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error (76 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error (9 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial (51 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel +8: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error (372 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_serial (323 ms) +7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/128_bins_23_window_parallel +11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error (102 ms) 11: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error (48 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error (51 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_parallel (32 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_serial -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (84 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel (71 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error (93 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error +4: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial (60 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (574 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error (14 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error (48 ms) -11: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error (10 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error (69 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_19_window_serial (43 ms) -7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/128_bins_23_window_parallel -8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error (45 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_23_window_parallel (28 ms) +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error (117 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed (1343 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_23_window_parallel (209 ms) 7: [ RUN ] build_ibf_suite/build_ibf.with_socks_file/128_bins_23_window_serial -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (83 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error (70 ms) -11: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (103 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error (10 ms) -11: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error -7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_23_window_serial (39 ms) -7: [----------] 36 tests from build_ibf_suite/build_ibf (819 ms total) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error (404 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error +4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel (150 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error (447 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error (131 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error +11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error (365 ms) +11: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error +4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial (157 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error (121 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error +4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel (127 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial +7: [ OK ] build_ibf_suite/build_ibf.with_socks_file/128_bins_23_window_serial (330 ms) +7: [----------] 36 tests from build_ibf_suite/build_ibf (4911 ms total) 7: 7: [----------] Global test environment tear-down -7: [==========] 36 tests from 1 test suite ran. (819 ms total) +7: [==========] 36 tests from 1 test suite ran. (4911 ms total) 7: [ PASSED ] 36 tests. -11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error (10 ms) -11: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error - 6/12 Test #7: test/cli/build/cli_build_ibf_test .................... Passed 0.83 sec -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error (79 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error (57 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed (167 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed -8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error (15 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error (12 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error (36 ms) + 5/12 Test #7: test/cli/build/cli_build_ibf_test .................... Passed 4.94 sec +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error (135 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error (328 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error (75 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial (128 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error (131 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error +11: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error (340 ms) +11: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (603 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (561 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error (116 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error +11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error (131 ms) +11: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error (306 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error +4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel (245 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error (162 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error +11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error (147 ms) +11: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error (156 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error +4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial (288 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error (118 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error (399 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error (568 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error (50 ms) +11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error (343 ms) 11: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (77 ms) +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error (97 ms) +8: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (589 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error (39 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error (63 ms) -8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed (80 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed -11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error (63 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel (211 ms) +4: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial +8: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error (80 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error +8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error (104 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error (301 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error +11: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error (280 ms) 11: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error (71 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error (42 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error (11 ms) +4: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial (239 ms) +4: [----------] 24 tests from build_hibf_suite/build_hibf (4324 ms total) +4: +4: [----------] Global test environment tear-down +4: [==========] 25 tests from 2 test suites ran. (6071 ms total) +4: [ PASSED ] 25 tests. + 6/12 Test #4: test/cli/build/cli_build_hibf_test ................... Passed 6.09 sec +8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error (123 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed (1467 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed +11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error (87 ms) 11: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error (15 ms) +11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error (91 ms) 11: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error (87 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error (501 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error -8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error (51 ms) -8: [----------] 36 tests from search_hibf_suite/search_hibf (947 ms total) -8: -8: [----------] Global test environment tear-down -8: [==========] 37 tests from 2 test suites ran. (973 ms total) -8: [ PASSED ] 37 tests. - 7/12 Test #8: test/cli/search/cli_search_hibf_test ................. Passed 0.98 sec -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error (44 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed (74 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (64 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error (48 ms) -11: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error (74 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (54 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error (73 ms) +8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error (236 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error (600 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error (430 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error -11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error (64 ms) -11: [----------] 48 tests from search_ibf_suite/search_ibf (991 ms total) +11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error (243 ms) +11: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error +8: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error (267 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed (552 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed +8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error (132 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error +11: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error (319 ms) +11: [----------] 48 tests from search_ibf_suite/search_ibf (6315 ms total) 11: 11: [----------] Global test environment tear-down -11: [==========] 49 tests from 2 test suites ran. (1061 ms total) +11: [==========] 49 tests from 2 test suites ran. (6643 ms total) 11: [ PASSED ] 40 tests. 11: [ SKIPPED ] 9 tests, listed below: 11: [ SKIPPED ] search_ibf_suite/search_ibf.socks/1_bins_19_window_1_error @@ -7372,38 +7365,50 @@ 11: [ SKIPPED ] search_ibf_suite/search_ibf.socks/128_bins_19_window_1_error 11: [ SKIPPED ] search_ibf_suite/search_ibf.socks/128_bins_23_window_0_error 11: [ SKIPPED ] search_ibf_suite/search_ibf.socks/128_bins_23_window_1_error - 8/12 Test #11: test/cli/search/cli_search_ibf_test .................. Passed 1.07 sec -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (47 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed (89 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error (72 ms) + 7/12 Test #11: test/cli/search/cli_search_ibf_test .................. Passed 6.67 sec +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error (379 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error (78 ms) +8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error (130 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (521 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error (563 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed (423 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (304 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error +8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error (343 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (458 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error (505 ms) +5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error +8: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error (303 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error +8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error (139 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error (471 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (56 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (429 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed (111 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error (58 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error (71 ms) -5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error (81 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error (64 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error (80 ms) +8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error (129 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error (606 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_parallel0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (81 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_parallel0_error (22 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed (903 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed +8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error (286 ms) +8: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_parallel0_error (147 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_parallel1_error 5: ./test/cli/build/cli_build_ibf_compressed_test.cpp:72: Skipped 5: SOCKS only supports (k,k)-minimizers 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_parallel1_error (0 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_serial0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_serial0_error (17 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error (590 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_serial0_error (160 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_serial1_error 5: ./test/cli/build/cli_build_ibf_compressed_test.cpp:72: Skipped 5: SOCKS only supports (k,k)-minimizers @@ -7425,17 +7430,26 @@ 5: SOCKS only supports (k,k)-minimizers 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_23_window_serial1_error (0 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (84 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_parallel0_error (25 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error (531 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error +8: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error (315 ms) +8: [----------] 36 tests from search_hibf_suite/search_hibf (6611 ms total) +8: +8: [----------] Global test environment tear-down +8: [==========] 37 tests from 2 test suites ran. (8275 ms total) +8: [ PASSED ] 37 tests. + 8/12 Test #8: test/cli/search/cli_search_hibf_test ................. Passed 8.31 sec +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_parallel0_error (267 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_parallel1_error 5: ./test/cli/build/cli_build_ibf_compressed_test.cpp:72: Skipped 5: SOCKS only supports (k,k)-minimizers 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_parallel1_error (0 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_serial0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed (176 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_serial0_error (31 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed (799 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error (516 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_serial0_error (314 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_19_window_serial1_error 5: ./test/cli/build/cli_build_ibf_compressed_test.cpp:72: Skipped 5: SOCKS only supports (k,k)-minimizers @@ -7457,17 +7471,15 @@ 5: SOCKS only supports (k,k)-minimizers 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/64_bins_23_window_serial1_error (0 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_parallel0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (88 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_parallel0_error (35 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (621 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_parallel0_error (256 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_parallel1_error 5: ./test/cli/build/cli_build_ibf_compressed_test.cpp:72: Skipped 5: SOCKS only supports (k,k)-minimizers 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_parallel1_error (0 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_serial0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (80 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error -5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_serial0_error (46 ms) +5: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_serial0_error (254 ms) 5: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_19_window_serial1_error 5: ./test/cli/build/cli_build_ibf_compressed_test.cpp:72: Skipped 5: SOCKS only supports (k,k)-minimizers @@ -7488,10 +7500,10 @@ 5: ./test/cli/build/cli_build_ibf_compressed_test.cpp:72: Skipped 5: SOCKS only supports (k,k)-minimizers 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_23_window_serial1_error (0 ms) -5: [----------] 48 tests from build_ibf_compressed_suite/build_ibf_compressed (1473 ms total) +5: [----------] 48 tests from build_ibf_compressed_suite/build_ibf_compressed (9272 ms total) 5: 5: [----------] Global test environment tear-down -5: [==========] 49 tests from 2 test suites ran. (1473 ms total) +5: [==========] 49 tests from 2 test suites ran. (9327 ms total) 5: [ PASSED ] 31 tests. 5: [ SKIPPED ] 18 tests, listed below: 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/1_bins_19_window_parallel1_error @@ -7512,161 +7524,169 @@ 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_23_window_parallel1_error 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_23_window_serial0_error 5: [ SKIPPED ] build_ibf_compressed_suite/build_ibf_compressed.pipeline_socks/128_bins_23_window_serial1_error - 9/12 Test #5: test/cli/build/cli_build_ibf_compressed_test ......... Passed 1.48 sec -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error (99 ms) + 9/12 Test #5: test/cli/build/cli_build_ibf_compressed_test ......... Passed 9.36 sec +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (518 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (699 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error (640 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error (89 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed (1325 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (625 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error (754 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error (734 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed (166 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error (223 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error (245 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error (255 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed (1406 ms) 6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error (107 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error (84 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error (721 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error (23 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error (26 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error (267 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error (338 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed (95 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed (645 ms) 6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error (21 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error (25 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error (268 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error (21 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error (21 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error (32 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error (487 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error (275 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error (24 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error (308 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error (292 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed (90 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed (671 ms) 6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error (54 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error (58 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error (462 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error (531 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error (53 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed (110 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error (496 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed (818 ms) 6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error (71 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error (489 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error (55 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error (55 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error (71 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error (40 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error (318 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed (115 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error (64 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error (42 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error (310 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error (40 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error (374 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed (880 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error (386 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error (69 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error (43 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error (500 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error (356 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error (66 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error (539 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error (555 ms) +9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error (624 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed (177 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed (1399 ms) 6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error (80 ms) -9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error (63 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error (76 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error (555 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error (72 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error (70 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error (593 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error (540 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed (199 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error (68 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error (594 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error (496 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed (83 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error (59 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed (1256 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error (387 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error (58 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed (687 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error (519 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed (82 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed (645 ms) 6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error (274 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error (77 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error (629 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed (110 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error (74 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error (1580 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error (595 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error (84 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed (816 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error (666 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed (135 ms) -6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error (239 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error (1448 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error (79 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed (919 ms) +6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error (617 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error (89 ms) +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error (623 ms) 9: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed (160 ms) +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed (1355 ms) 6: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed -9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error (91 ms) -9: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing (2975 ms total) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error (1570 ms) +10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error +9: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error (703 ms) +9: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing (21651 ms total) 9: 9: [----------] Global test environment tear-down -9: [==========] 48 tests from 1 test suite ran. (2975 ms total) +9: [==========] 48 tests from 1 test suite ran. (21651 ms total) 9: [ PASSED ] 48 tests. -10/12 Test #9: test/cli/search/cli_search_hibf_preprocessing_test ... Passed 2.98 sec -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error (261 ms) -10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error -6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed (173 ms) -6: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned (2966 ms total) +10/12 Test #9: test/cli/search/cli_search_hibf_preprocessing_test ... Passed 21.70 sec +6: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed (1484 ms) +6: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned (22202 ms total) 6: 6: [----------] Global test environment tear-down -6: [==========] 25 tests from 2 test suites ran. (3079 ms total) +6: [==========] 25 tests from 2 test suites ran. (23045 ms total) 6: [ PASSED ] 25 tests. -11/12 Test #6: test/cli/build/cli_build_ibf_partitioned_test ........ Passed 3.09 sec -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error (246 ms) +11/12 Test #6: test/cli/build/cli_build_ibf_partitioned_test ........ Passed 23.07 sec +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error (1723 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error (71 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error (611 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error (73 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error (644 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error (100 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error (907 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error (105 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error (860 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error (216 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error (1910 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error (276 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error (1515 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error (237 ms) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error (1515 ms) 10: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error -10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error (329 ms) -10: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing (4631 ms total) +10: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error (1564 ms) +10: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing (32472 ms total) 10: 10: [----------] Global test environment tear-down -10: [==========] 49 tests from 2 test suites ran. (4673 ms total) +10: [==========] 49 tests from 2 test suites ran. (32716 ms total) 10: [ PASSED ] 49 tests. -12/12 Test #10: test/cli/search/cli_search_ibf_preprocessing_test .... Passed 4.68 sec +12/12 Test #10: test/cli/search/cli_search_ibf_preprocessing_test .... Passed 32.76 sec 100% tests passed, 0 tests failed out of 12 -Total Test time (real) = 287.72 sec +Total Test time (real) = 1769.07 sec make[1]: Leaving directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/seqan-raptor-2.0.0.0.git.fecfbca\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/seqan-raptor-2.0.0.0.git.fecfbca\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/seqan-raptor-2.0.0.0.git.fecfbca+ds -B/build/seqan-raptor-2.0.0.0.git.fecfbca+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -7697,8 +7717,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'seqan-raptor' in '../seqan-raptor_2.0.0.0.git.fecfbca+ds-3_amd64.deb'. dpkg-deb: building package 'seqan-raptor-dbgsym' in '../seqan-raptor-dbgsym_2.0.0.0.git.fecfbca+ds-3_amd64.deb'. +dpkg-deb: building package 'seqan-raptor' in '../seqan-raptor_2.0.0.0.git.fecfbca+ds-3_amd64.deb'. dpkg-deb: building package 'seqan-raptor-doc' in '../seqan-raptor-doc_2.0.0.0.git.fecfbca+ds-3_all.deb'. dpkg-genbuildinfo --build=binary -O../seqan-raptor_2.0.0.0.git.fecfbca+ds-3_amd64.buildinfo dpkg-genchanges --build=binary -O../seqan-raptor_2.0.0.0.git.fecfbca+ds-3_amd64.changes @@ -7707,12 +7727,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/837095/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3467103 and its subdirectories -I: Current time: Thu May 16 18:43:55 -12 2024 -I: pbuilder-time-stamp: 1715928235 +I: removing directory /srv/workspace/pbuilder/837095 and its subdirectories +I: Current time: Sat Apr 15 15:24:09 +14 2023 +I: pbuilder-time-stamp: 1681521849