Diff of the two buildlogs: -- --- b1/build.log 2023-04-16 19:12:28.228213057 +0000 +++ b2/build.log 2023-04-16 19:52:25.649859546 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Apr 16 06:32:57 -12 2023 -I: pbuilder-time-stamp: 1681669977 +I: Current time: Sun May 19 15:35:34 +14 2024 +I: pbuilder-time-stamp: 1716082534 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./apbs_3.4.1.orig.tar.gz] I: copying [./apbs_3.4.1-5.debian.tar.xz] I: Extracting source -gpgv: Signature made Tue Jan 10 08:57:55 2023 -12 +gpgv: Signature made Wed Jan 11 10:57:55 2023 +14 gpgv: using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./apbs_3.4.1-5.dsc: no acceptable signature found @@ -34,52 +34,84 @@ dpkg-source: info: applying open-U-obsolete.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/17545/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/D01_modify_environment starting +debug: Running on codethink9-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 19 15:35 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' - DISTRIBUTION='bookworm' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='17545' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2894 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CfDqLBe3/pbuilderrc_IDe8 --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CfDqLBe3/b1 --logfile b1/build.log apbs_3.4.1-5.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CfDqLBe3/pbuilderrc_89aK --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CfDqLBe3/b2 --logfile b2/build.log --extrapackages usrmerge apbs_3.4.1-5.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink10-arm64 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Apr 14 00:48 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/17545/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 18 06:48 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -356,7 +388,7 @@ Get: 200 http://deb.debian.org/debian bookworm/main arm64 python3-yaml arm64 6.0-3+b2 [108 kB] Get: 201 http://deb.debian.org/debian bookworm/main arm64 swig4.0 arm64 4.1.0-0.2 [1299 kB] Get: 202 http://deb.debian.org/debian bookworm/main arm64 swig all 4.1.0-0.2 [321 kB] -Fetched 100.0 MB in 3s (36.7 MB/s) +Fetched 100.0 MB in 5s (22.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) @@ -1200,10 +1232,15 @@ Reading package lists... Building dependency tree... Reading state information... +usrmerge is already the newest version (35). fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/apbs-3.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../apbs_3.4.1-5_source.changes +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/apbs-3.4.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../apbs_3.4.1-5_source.changes dpkg-buildpackage: info: source package apbs dpkg-buildpackage: info: source version 3.4.1-5 dpkg-buildpackage: info: source distribution unstable @@ -1464,7 +1501,7 @@ -- ** PROJECT DESC: Adaptive Poisson-Boltzmann Solver -- ** PROJECT URL: http://www.poissonboltzmann.org/ -- ** VERSION_DATA: 3.4.1 --- ** CURRENT_TIME: 2023-01-10T08:56:38 +-- ** CURRENT_TIME: 2023-01-11T10:56:38 -- ** CURRENT_YEAR: 2023 -- Setting project paths -- Setting lookup paths for headers and libraries @@ -1656,8 +1693,8 @@ make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/build.make _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/depend -make -f _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/build.make _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/build.make _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/depend cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/DependInfo.cmake --color= make -f _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build.make _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' @@ -1667,310 +1704,323 @@ cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/python /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake --color= -Dependee "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake" is newer than depender "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". -Dependee "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". -Scanning dependencies of target apbslib_swig_compilation -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/build -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/build.make _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/build make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/build.make _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/build +Dependee "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake" is newer than depender "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". +Dependee "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build.make _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/build.make _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build.make _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/build +Scanning dependencies of target apbslib_swig_compilation make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 0%] Swig compile apbslib.i for python -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python && /usr/bin/cmake -E make_directory /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir -[ 0%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scr.c.o -[ 1%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scg.c.o -[ 1%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77vers.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scg.c.o -MF CMakeFiles/cgcode.dir/scg.c.o.d -o CMakeFiles/cgcode.dir/scg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scg.c -[ 1%] Building C object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/triangle/triangle.c.o +[ 0%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77vers.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77vers.c.o -MF CMakeFiles/vf2c.dir/f77vers.c.o.d -o CMakeFiles/vf2c.dir/f77vers.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/f77vers.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cc -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/triangle/triangle.c.o -MF CMakeFiles/gamer.dir/triangle/triangle.c.o.d -o CMakeFiles/gamer.dir/triangle/triangle.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle/triangle.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scr.c.o -MF CMakeFiles/cgcode.dir/scr.c.o.d -o CMakeFiles/cgcode.dir/scr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scr.c -[ 1%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgdrv.c.o +[ 2%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i77vers.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i77vers.c.o -MF CMakeFiles/vf2c.dir/i77vers.c.o.d -o CMakeFiles/vf2c.dir/i77vers.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i77vers.c +[ 2%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scg.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scg.c.o -MF CMakeFiles/cgcode.dir/scg.c.o.d -o CMakeFiles/cgcode.dir/scg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scg.c +[ 2%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgdrv.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgdrv.c.o -MF CMakeFiles/cgcode.dir/scgdrv.c.o.d -o CMakeFiles/cgcode.dir/scgdrv.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgdrv.c -[ 2%] Building C object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/base/gamer_base.c.o -[ 2%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scrind.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scrind.c.o -MF CMakeFiles/cgcode.dir/scrind.c.o.d -o CMakeFiles/cgcode.dir/scrind.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scrind.c +[ 3%] Building C object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/base/gamer_base.c.o +[ 3%] Building C object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/triangle/triangle.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cc -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/base/gamer_base.c.o -MF CMakeFiles/gamer.dir/base/gamer_base.c.o.d -o CMakeFiles/gamer.dir/base/gamer_base.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base/gamer_base.c +[ 3%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scr.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scr.c.o -MF CMakeFiles/cgcode.dir/scr.c.o.d -o CMakeFiles/cgcode.dir/scr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scr.c +[ 3%] Swig compile apbslib.i for python +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python && /usr/bin/cmake -E make_directory /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cc -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/triangle/triangle.c.o -MF CMakeFiles/gamer.dir/triangle/triangle.c.o.d -o CMakeFiles/gamer.dir/triangle/triangle.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle/triangle.c +[ 3%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_rnge.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_rnge.c.o -MF CMakeFiles/vf2c.dir/s_rnge.c.o.d -o CMakeFiles/vf2c.dir/s_rnge.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_rnge.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python && /usr/bin/cmake -E touch /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON.stamp +[ 3%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/abort_.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/abort_.c.o -MF CMakeFiles/vf2c.dir/abort_.c.o.d -o CMakeFiles/vf2c.dir/abort_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/abort_.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig4.0 /usr/bin/swig4.0 -python -outdir /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python -interface _apbslib -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/python3.11 -I/build/apbs-3.4.1/tools/python -o /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /build/apbs-3.4.1/tools/python/apbslib.i -[ 3%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i77vers.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i77vers.c.o -MF CMakeFiles/vf2c.dir/i77vers.c.o.d -o CMakeFiles/vf2c.dir/i77vers.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i77vers.c [ 3%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/predicates.cpp.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/predicates.cpp.o -MF CMakeFiles/gamer.dir/tetgen/predicates.cpp.o.d -o CMakeFiles/gamer.dir/tetgen/predicates.cpp.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/predicates.cpp -[ 3%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_rnge.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_rnge.c.o -MF CMakeFiles/vf2c.dir/s_rnge.c.o.d -o CMakeFiles/vf2c.dir/s_rnge.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_rnge.c -[ 4%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcg.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcg.c.o -MF CMakeFiles/cgcode.dir/spcg.c.o.d -o CMakeFiles/cgcode.dir/spcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcg.c -[ 4%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgnr.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgnr.c.o -MF CMakeFiles/cgcode.dir/scgnr.c.o.d -o CMakeFiles/cgcode.dir/scgnr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgnr.c -[ 4%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/abort_.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/abort_.c.o -MF CMakeFiles/vf2c.dir/abort_.c.o.d -o CMakeFiles/vf2c.dir/abort_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/abort_.c -[ 4%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgne.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgne.c.o -MF CMakeFiles/cgcode.dir/scgne.c.o.d -o CMakeFiles/cgcode.dir/scgne.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgne.c -[ 4%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgnr.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgnr.c.o -MF CMakeFiles/cgcode.dir/spcgnr.c.o.d -o CMakeFiles/cgcode.dir/spcgnr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgnr.c -[ 4%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/exit_.c.o +[ 3%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/exit_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/exit_.c.o -MF CMakeFiles/vf2c.dir/exit_.c.o.d -o CMakeFiles/vf2c.dir/exit_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/exit_.c -[ 5%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/getarg_.c.o +[ 3%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scrind.c.o +[ 4%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/getarg_.c.o +cd 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-ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/getarg_.c.o -MF CMakeFiles/vf2c.dir/getarg_.c.o.d -o CMakeFiles/vf2c.dir/getarg_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/getarg_.c -[ 6%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgne.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 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CMakeFiles/cgcode.dir/sppcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sppcg.c -[ 6%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgca.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgca.c.o -MF CMakeFiles/cgcode.dir/spcgca.c.o.d -o CMakeFiles/cgcode.dir/spcgca.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgca.c -[ 7%] Building C object 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-I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgnr.c.o -MF CMakeFiles/cgcode.dir/scgnr.c.o.d -o CMakeFiles/cgcode.dir/scgnr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgnr.c +[ 5%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/getenv_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 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/usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_paus.c.o -MF CMakeFiles/vf2c.dir/s_paus.c.o.d -o CMakeFiles/vf2c.dir/s_paus.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_paus.c -[ 8%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgchk.c.o -[ 9%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sonest.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c 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-D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgchk.c.o -MF CMakeFiles/cgcode.dir/scgchk.c.o.d -o CMakeFiles/cgcode.dir/scgchk.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgchk.c -[ 9%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/msstop.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/msstop.c.o -MF CMakeFiles/cgcode.dir/msstop.c.o.d -o CMakeFiles/cgcode.dir/msstop.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/msstop.c -[ 9%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/r1mach.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/r1mach.c.o -MF CMakeFiles/cgcode.dir/r1mach.c.o.d -o CMakeFiles/cgcode.dir/r1mach.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/r1mach.c -[ 9%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/system_.c.o +[ 6%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgne.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgne.c.o -MF CMakeFiles/cgcode.dir/scgne.c.o.d -o CMakeFiles/cgcode.dir/scgne.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgne.c +[ 6%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgnr.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgnr.c.o -MF CMakeFiles/cgcode.dir/spcgnr.c.o.d -o CMakeFiles/cgcode.dir/spcgnr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgnr.c +[ 7%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgne.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgne.c.o -MF CMakeFiles/cgcode.dir/spcgne.c.o.d -o CMakeFiles/cgcode.dir/spcgne.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgne.c +[ 7%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/system_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/system_.c.o -MF CMakeFiles/vf2c.dir/system_.c.o.d -o CMakeFiles/vf2c.dir/system_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/system_.c -[ 10%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sratqr.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sratqr.c.o -MF CMakeFiles/cgcode.dir/sratqr.c.o.d -o CMakeFiles/cgcode.dir/sratqr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sratqr.c -[ 10%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgdrv.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgdrv.c.o -MF CMakeFiles/cgcode.dir/dcgdrv.c.o.d -o 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_deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/cabs.c.o +[ 8%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/cabs.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/cabs.c.o -MF CMakeFiles/vf2c.dir/cabs.c.o.d -o CMakeFiles/vf2c.dir/cabs.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/cabs.c -[ 11%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcr.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcr.c.o -MF CMakeFiles/cgcode.dir/dcr.c.o.d -o CMakeFiles/cgcode.dir/dcr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcr.c -[ 11%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/derf_.c.o +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 8%] Built target apbslib_swig_compilation +[ 8%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/derf_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc 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-ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/derfc_.c.o -MF CMakeFiles/vf2c.dir/derfc_.c.o.d -o CMakeFiles/vf2c.dir/derfc_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/derfc_.c -[ 12%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erf_.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT 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/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcrind.c -[ 13%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erfc_.c.o +[ 8%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sppcg.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sppcg.c.o -MF CMakeFiles/cgcode.dir/sppcg.c.o.d -o CMakeFiles/cgcode.dir/sppcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sppcg.c +[ 8%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erfc_.c.o +[ 9%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erf_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erfc_.c.o -MF CMakeFiles/vf2c.dir/erfc_.c.o.d -o CMakeFiles/vf2c.dir/erfc_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/erfc_.c -[ 13%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcg.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcg.c.o -MF CMakeFiles/cgcode.dir/dpcg.c.o.d -o CMakeFiles/cgcode.dir/dpcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcg.c -[ 13%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sig_die.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/erf_.c.o -MF CMakeFiles/vf2c.dir/erf_.c.o.d -o CMakeFiles/vf2c.dir/erf_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/erf_.c +[ 9%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sig_die.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sig_die.c.o -MF CMakeFiles/vf2c.dir/sig_die.c.o.d -o CMakeFiles/vf2c.dir/sig_die.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/sig_die.c -[ 13%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uninit.c.o +[ 9%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgca.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/spcgca.c.o -MF CMakeFiles/cgcode.dir/spcgca.c.o.d -o CMakeFiles/cgcode.dir/spcgca.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/spcgca.c +[ 9%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uninit.c.o +[ 9%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o +[ 10%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sdpchb.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sdpchb.c.o -MF CMakeFiles/cgcode.dir/sdpchb.c.o.d -o CMakeFiles/cgcode.dir/sdpchb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sdpchb.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uninit.c.o -MF CMakeFiles/vf2c.dir/uninit.c.o.d -o CMakeFiles/vf2c.dir/uninit.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/uninit.c -[ 13%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgnr.c.o -cd 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-I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o -MF CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o.d -o CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp +[ 11%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ci.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ci.c.o -MF CMakeFiles/vf2c.dir/pow_ci.c.o.d -o CMakeFiles/vf2c.dir/pow_ci.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_ci.c -[ 14%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgne.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security 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/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgne.c -[ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_dd.c.o +[ 11%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_dd.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_dd.c.o -MF CMakeFiles/vf2c.dir/pow_dd.c.o.d -o CMakeFiles/vf2c.dir/pow_dd.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_dd.c -[ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_di.c.o +[ 11%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_di.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_di.c.o -MF CMakeFiles/vf2c.dir/pow_di.c.o.d -o CMakeFiles/vf2c.dir/pow_di.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_di.c -[ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_hh.c.o +[ 11%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_hh.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_hh.c.o -MF CMakeFiles/vf2c.dir/pow_hh.c.o.d -o CMakeFiles/vf2c.dir/pow_hh.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_hh.c -[ 16%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ii.c.o +[ 11%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sckchb.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sckchb.c.o -MF CMakeFiles/cgcode.dir/sckchb.c.o.d -o CMakeFiles/cgcode.dir/sckchb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sckchb.c +[ 11%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scbfix.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scbfix.c.o -MF CMakeFiles/cgcode.dir/scbfix.c.o.d -o CMakeFiles/cgcode.dir/scbfix.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scbfix.c +[ 12%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ii.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ii.c.o -MF CMakeFiles/vf2c.dir/pow_ii.c.o.d -o CMakeFiles/vf2c.dir/pow_ii.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_ii.c -[ 16%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dppcg.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dppcg.c.o -MF CMakeFiles/cgcode.dir/dppcg.c.o.d -o CMakeFiles/cgcode.dir/dppcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dppcg.c -[ 16%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ri.c.o +[ 12%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ri.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_ri.c.o -MF CMakeFiles/vf2c.dir/pow_ri.c.o.d -o CMakeFiles/vf2c.dir/pow_ri.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_ri.c -[ 17%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgca.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgca.c.o -MF CMakeFiles/cgcode.dir/dpcgca.c.o.d -o CMakeFiles/cgcode.dir/dpcgca.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgca.c -[ 17%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/ddpchb.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/ddpchb.c.o -MF CMakeFiles/cgcode.dir/ddpchb.c.o.d -o CMakeFiles/cgcode.dir/ddpchb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/ddpchb.c -[ 17%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zi.c.o +[ 12%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zi.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zi.c.o -MF CMakeFiles/vf2c.dir/pow_zi.c.o.d -o CMakeFiles/vf2c.dir/pow_zi.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_zi.c -[ 17%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcbfix.c.o -[ 18%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zz.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcbfix.c.o -MF CMakeFiles/cgcode.dir/dcbfix.c.o.d -o CMakeFiles/cgcode.dir/dcbfix.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcbfix.c +[ 12%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgchk.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/scgchk.c.o -MF CMakeFiles/cgcode.dir/scgchk.c.o.d -o CMakeFiles/cgcode.dir/scgchk.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/scgchk.c +[ 13%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sonest.c.o +[ 14%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zz.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/pow_zz.c.o -MF CMakeFiles/vf2c.dir/pow_zz.c.o.d -o CMakeFiles/vf2c.dir/pow_zz.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/pow_zz.c -[ 18%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_abs.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sonest.c.o -MF CMakeFiles/cgcode.dir/sonest.c.o.d -o CMakeFiles/cgcode.dir/sonest.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sonest.c +[ 15%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/CorrectNormals.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/CorrectNormals.C.o -MF CMakeFiles/gamer.dir/biom/CorrectNormals.C.o.d -o CMakeFiles/gamer.dir/biom/CorrectNormals.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/CorrectNormals.C +[ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_abs.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_abs.c.o -MF CMakeFiles/vf2c.dir/c_abs.c.o.d -o CMakeFiles/vf2c.dir/c_abs.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_abs.c -[ 18%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dckchb.c.o -[ 19%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgchk.c.o -[ 19%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_cos.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgchk.c.o -MF CMakeFiles/cgcode.dir/dcgchk.c.o.d -o CMakeFiles/cgcode.dir/dcgchk.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgchk.c +[ 15%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/msstop.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/msstop.c.o -MF CMakeFiles/cgcode.dir/msstop.c.o.d -o CMakeFiles/cgcode.dir/msstop.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/msstop.c +[ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_cos.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_cos.c.o -MF CMakeFiles/vf2c.dir/c_cos.c.o.d -o CMakeFiles/vf2c.dir/c_cos.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_cos.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dckchb.c.o -MF CMakeFiles/cgcode.dir/dckchb.c.o.d -o CMakeFiles/cgcode.dir/dckchb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dckchb.c -[ 19%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_div.c.o +[ 15%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_div.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_div.c.o -MF CMakeFiles/vf2c.dir/c_div.c.o.d -o CMakeFiles/vf2c.dir/c_div.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_div.c -[ 20%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_exp.c.o +[ 15%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/r1mach.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/r1mach.c.o -MF CMakeFiles/cgcode.dir/r1mach.c.o.d -o CMakeFiles/cgcode.dir/r1mach.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/r1mach.c +[ 16%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sratqr.c.o +[ 16%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgdrv.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/sratqr.c.o -MF CMakeFiles/cgcode.dir/sratqr.c.o.d -o CMakeFiles/cgcode.dir/sratqr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/sratqr.c +[ 17%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_exp.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_exp.c.o -MF CMakeFiles/vf2c.dir/c_exp.c.o.d -o CMakeFiles/vf2c.dir/c_exp.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_exp.c -[ 20%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_log.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgdrv.c.o -MF CMakeFiles/cgcode.dir/dcgdrv.c.o.d -o CMakeFiles/cgcode.dir/dcgdrv.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgdrv.c +[ 17%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcg.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcg.c.o -MF CMakeFiles/cgcode.dir/dcg.c.o.d -o CMakeFiles/cgcode.dir/dcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcg.c +[ 17%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_log.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_log.c.o -MF CMakeFiles/vf2c.dir/c_log.c.o.d -o CMakeFiles/vf2c.dir/c_log.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_log.c -[ 20%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/donest.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/donest.c.o -MF CMakeFiles/cgcode.dir/donest.c.o.d -o CMakeFiles/cgcode.dir/donest.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/donest.c -[ 20%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/mdstop.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/mdstop.c.o -MF CMakeFiles/cgcode.dir/mdstop.c.o.d -o CMakeFiles/cgcode.dir/mdstop.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/mdstop.c -[ 21%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/d1mach.c.o -[ 21%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sin.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/d1mach.c.o -MF CMakeFiles/cgcode.dir/d1mach.c.o.d -o CMakeFiles/cgcode.dir/d1mach.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/d1mach.c +[ 17%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcr.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcr.c.o -MF CMakeFiles/cgcode.dir/dcr.c.o.d -o CMakeFiles/cgcode.dir/dcr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcr.c +[ 18%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcrind.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcrind.c.o -MF CMakeFiles/cgcode.dir/dcrind.c.o.d -o CMakeFiles/cgcode.dir/dcrind.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcrind.c +[ 18%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sin.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sin.c.o -MF CMakeFiles/vf2c.dir/c_sin.c.o.d -o CMakeFiles/vf2c.dir/c_sin.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_sin.c -[ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sqrt.c.o +[ 19%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sqrt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/c_sqrt.c.o -MF CMakeFiles/vf2c.dir/c_sqrt.c.o.d -o CMakeFiles/vf2c.dir/c_sqrt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/c_sqrt.c -[ 22%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dratqr.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dratqr.c.o -MF CMakeFiles/cgcode.dir/dratqr.c.o.d -o CMakeFiles/cgcode.dir/dratqr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dratqr.c -[ 22%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/depsln.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/depsln.c.o -MF CMakeFiles/cgcode.dir/depsln.c.o.d -o CMakeFiles/cgcode.dir/depsln.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/depsln.c -[ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_abs.c.o +[ 19%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_abs.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_abs.c.o -MF CMakeFiles/vf2c.dir/z_abs.c.o.d -o CMakeFiles/vf2c.dir/z_abs.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_abs.c -[ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_cos.c.o -[ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_div.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_div.c.o -MF CMakeFiles/vf2c.dir/z_div.c.o.d -o CMakeFiles/vf2c.dir/z_div.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_div.c +[ 19%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcg.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcg.c.o -MF CMakeFiles/cgcode.dir/dpcg.c.o.d -o CMakeFiles/cgcode.dir/dpcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcg.c +[ 19%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgnr.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgnr.c.o -MF CMakeFiles/cgcode.dir/dcgnr.c.o.d -o CMakeFiles/cgcode.dir/dcgnr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgnr.c +[ 19%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_cos.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_cos.c.o -MF CMakeFiles/vf2c.dir/z_cos.c.o.d -o CMakeFiles/vf2c.dir/z_cos.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_cos.c -[ 22%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o -[ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_log.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o -MF CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o.d -o CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_log.c.o -MF CMakeFiles/vf2c.dir/z_log.c.o.d -o CMakeFiles/vf2c.dir/z_log.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_log.c -[ 23%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_exp.c.o +[ 19%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgne.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgne.c.o -MF CMakeFiles/cgcode.dir/dcgne.c.o.d -o CMakeFiles/cgcode.dir/dcgne.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgne.c +[ 19%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_div.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_div.c.o -MF CMakeFiles/vf2c.dir/z_div.c.o.d -o CMakeFiles/vf2c.dir/z_div.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_div.c +[ 20%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgnr.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgnr.c.o -MF CMakeFiles/cgcode.dir/dpcgnr.c.o.d -o CMakeFiles/cgcode.dir/dpcgnr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgnr.c +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp: In member function 'void tetgenmesh::constrainedfacets()': +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20804:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] +20804 | equatptlist = new list("point *"); + | ^~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20809:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] +20809 | horizptlist = new list("point *"); + | ^~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20810:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] +20810 | belowptlist = new list("point *"); + | ^~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20811:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] +20811 | aboveptlist = new list("point *"); + | ^~~~~~~~~ +[ 21%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_exp.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_exp.c.o -MF CMakeFiles/vf2c.dir/z_exp.c.o.d -o CMakeFiles/vf2c.dir/z_exp.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_exp.c -[ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sqrt.c.o -[ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sin.c.o +[ 21%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgne.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgne.c.o -MF CMakeFiles/cgcode.dir/dpcgne.c.o.d -o CMakeFiles/cgcode.dir/dpcgne.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgne.c +[ 21%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_log.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_log.c.o -MF CMakeFiles/vf2c.dir/z_log.c.o.d -o CMakeFiles/vf2c.dir/z_log.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_log.c +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp: In member function 'long int tetgenmesh::reconstructmesh()': +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:24383:25: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] +24383 | markerlist = new list("int"); + | ^~~~~ +[ 21%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dppcg.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dppcg.c.o -MF CMakeFiles/cgcode.dir/dppcg.c.o.d -o CMakeFiles/cgcode.dir/dppcg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dppcg.c +[ 22%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgca.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dpcgca.c.o -MF CMakeFiles/cgcode.dir/dpcgca.c.o.d -o CMakeFiles/cgcode.dir/dpcgca.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dpcgca.c +[ 22%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sin.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sin.c.o -MF CMakeFiles/vf2c.dir/z_sin.c.o.d -o CMakeFiles/vf2c.dir/z_sin.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_sin.c +[ 22%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/ddpchb.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/ddpchb.c.o -MF CMakeFiles/cgcode.dir/ddpchb.c.o.d -o CMakeFiles/cgcode.dir/ddpchb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/ddpchb.c +[ 22%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o -MF CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o.d -o CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/GenerateSphereMesh.C +[ 23%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sqrt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/z_sqrt.c.o -MF CMakeFiles/vf2c.dir/z_sqrt.c.o.d -o CMakeFiles/vf2c.dir/z_sqrt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/z_sqrt.c -[ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_abs.c.o +[ 23%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_abs.c.o +[ 23%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcbfix.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcbfix.c.o -MF CMakeFiles/cgcode.dir/dcbfix.c.o.d -o CMakeFiles/cgcode.dir/dcbfix.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcbfix.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_abs.c.o -MF CMakeFiles/vf2c.dir/r_abs.c.o.d -o CMakeFiles/vf2c.dir/r_abs.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_abs.c +[ 23%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dckchb.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dckchb.c.o -MF CMakeFiles/cgcode.dir/dckchb.c.o.d -o CMakeFiles/cgcode.dir/dckchb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dckchb.c +[ 24%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgchk.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dcgchk.c.o -MF CMakeFiles/cgcode.dir/dcgchk.c.o.d -o CMakeFiles/cgcode.dir/dcgchk.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dcgchk.c [ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_acos.c.o -[ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_asin.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_acos.c.o -MF CMakeFiles/vf2c.dir/r_acos.c.o.d -o CMakeFiles/vf2c.dir/r_acos.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_acos.c +[ 24%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/donest.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/donest.c.o -MF CMakeFiles/cgcode.dir/donest.c.o.d -o CMakeFiles/cgcode.dir/donest.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/donest.c +[ 24%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_asin.c.o +[ 24%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/mdstop.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_asin.c.o -MF CMakeFiles/vf2c.dir/r_asin.c.o.d -o CMakeFiles/vf2c.dir/r_asin.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_asin.c -[ 25%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/CorrectNormals.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/mdstop.c.o -MF CMakeFiles/cgcode.dir/mdstop.c.o.d -o CMakeFiles/cgcode.dir/mdstop.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/mdstop.c +[ 25%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/d1mach.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/d1mach.c.o -MF CMakeFiles/cgcode.dir/d1mach.c.o.d -o CMakeFiles/cgcode.dir/d1mach.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/d1mach.c +[ 25%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dratqr.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/dratqr.c.o -MF CMakeFiles/cgcode.dir/dratqr.c.o.d -o CMakeFiles/cgcode.dir/dratqr.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/dratqr.c +[ 25%] Building C object _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/depsln.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cc -Dcgcode_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/cgcode/CMakeFiles/cgcode.dir/depsln.c.o -MF CMakeFiles/cgcode.dir/depsln.c.o.d -o CMakeFiles/cgcode.dir/depsln.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode/depsln.c [ 26%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atan.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atan.c.o -MF CMakeFiles/vf2c.dir/r_atan.c.o.d -o CMakeFiles/vf2c.dir/r_atan.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_atan.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/CorrectNormals.C.o -MF CMakeFiles/gamer.dir/biom/CorrectNormals.C.o.d -o CMakeFiles/gamer.dir/biom/CorrectNormals.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/CorrectNormals.C [ 26%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atn2.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_atn2.c.o -MF CMakeFiles/vf2c.dir/r_atn2.c.o.d -o CMakeFiles/vf2c.dir/r_atn2.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_atn2.c +[ 26%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/MarchingCube.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/MarchingCube.C.o -MF CMakeFiles/gamer.dir/biom/MarchingCube.C.o.d -o CMakeFiles/gamer.dir/biom/MarchingCube.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/MarchingCube.C [ 26%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cnjg.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cnjg.c.o -MF CMakeFiles/vf2c.dir/r_cnjg.c.o.d -o CMakeFiles/vf2c.dir/r_cnjg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_cnjg.c -[ 26%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cosh.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cosh.c.o -MF CMakeFiles/vf2c.dir/r_cosh.c.o.d -o CMakeFiles/vf2c.dir/r_cosh.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_cosh.c -[ 26%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_dim.c.o [ 27%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cos.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cos.c.o -MF CMakeFiles/vf2c.dir/r_cos.c.o.d -o CMakeFiles/vf2c.dir/r_cos.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_cos.c +[ 28%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o -MF CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o.d -o CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Mesh.C +[ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cosh.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_cosh.c.o -MF CMakeFiles/vf2c.dir/r_cosh.c.o.d -o CMakeFiles/vf2c.dir/r_cosh.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_cosh.c +[ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_dim.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_dim.c.o -MF CMakeFiles/vf2c.dir/r_dim.c.o.d -o CMakeFiles/vf2c.dir/r_dim.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_dim.c -[ 27%] Linking C shared library libcgcode.so +[ 28%] Linking C shared library libcgcode.so cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgcode.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libcgcode.so.1.9 -o libcgcode.so.1.9.3 CMakeFiles/cgcode.dir/scgdrv.c.o CMakeFiles/cgcode.dir/scg.c.o CMakeFiles/cgcode.dir/scr.c.o CMakeFiles/cgcode.dir/scrind.c.o CMakeFiles/cgcode.dir/spcg.c.o CMakeFiles/cgcode.dir/scgnr.c.o CMakeFiles/cgcode.dir/scgne.c.o CMakeFiles/cgcode.dir/spcgnr.c.o CMakeFiles/cgcode.dir/spcgne.c.o CMakeFiles/cgcode.dir/sppcg.c.o CMakeFiles/cgcode.dir/spcgca.c.o CMakeFiles/cgcode.dir/sdpchb.c.o CMakeFiles/cgcode.dir/scbfix.c.o CMakeFiles/cgcode.dir/sckchb.c.o CMakeFiles/cgcode.dir/scgchk.c.o CMakeFiles/cgcode.dir/sonest.c.o CMakeFiles/cgcode.dir/msstop.c.o CMakeFiles/cgcode.dir/r1mach.c.o CMakeFiles/cgcode.dir/sratqr.c.o CMakeFiles/cgcode.dir/dcgdrv.c.o CMakeFiles/cgcode.dir/dcg.c.o CMakeFiles/cgcode.dir/dcr.c.o CMakeFiles/cgcode.dir/dcrind.c.o CMakeFiles/cgcode.dir/dpcg.c.o CMakeFiles/cgcode.dir/dcgnr.c.o CMakeFiles/cgcode.dir/dcgne.c.o CMakeFiles/cgcode.dir/dpcgnr.c.o CMakeFiles/cgcode.dir/dpcgne.c.o CMakeFiles/cgcode.dir/dppcg.c.o CMakeFiles/cgcode.dir/dpcgca.c.o CMakeFiles/cgcode.dir/ddpchb.c.o CMakeFiles/cgcode.dir/dcbfix.c.o CMakeFiles/cgcode.dir/dckchb.c.o CMakeFiles/cgcode.dir/dcgchk.c.o CMakeFiles/cgcode.dir/donest.c.o CMakeFiles/cgcode.dir/mdstop.c.o CMakeFiles/cgcode.dir/d1mach.c.o CMakeFiles/cgcode.dir/dratqr.c.o CMakeFiles/cgcode.dir/depsln.c.o -[ 27%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_exp.c.o +[ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_exp.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_exp.c.o -MF CMakeFiles/vf2c.dir/r_exp.c.o.d -o CMakeFiles/vf2c.dir/r_exp.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_exp.c -[ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_imag.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cmake -E cmake_symlink_library libcgcode.so.1.9.3 libcgcode.so.1.9 libcgcode.so +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_imag.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_imag.c.o -MF CMakeFiles/vf2c.dir/r_imag.c.o.d -o CMakeFiles/vf2c.dir/r_imag.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_imag.c -[ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_int.c.o +[ 29%] Built target cgcode +[ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_int.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_int.c.o -MF CMakeFiles/vf2c.dir/r_int.c.o.d -o CMakeFiles/vf2c.dir/r_int.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_int.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/cgcode && /usr/bin/cmake -E cmake_symlink_library libcgcode.so.1.9.3 libcgcode.so.1.9 libcgcode.so -[ 28%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_lg10.c.o +[ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_lg10.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_lg10.c.o -MF CMakeFiles/vf2c.dir/r_lg10.c.o.d -o CMakeFiles/vf2c.dir/r_lg10.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_lg10.c -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_log.c.o +[ 30%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_log.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_log.c.o -MF CMakeFiles/vf2c.dir/r_log.c.o.d -o CMakeFiles/vf2c.dir/r_log.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_log.c -[ 29%] Built target cgcode -[ 29%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_mod.c.o -[ 29%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o +[ 30%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_mod.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_mod.c.o -MF CMakeFiles/vf2c.dir/r_mod.c.o.d -o CMakeFiles/vf2c.dir/r_mod.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/r_mod.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat 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-I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Volume.C.o -MF CMakeFiles/gamer.dir/biom/PDB2Volume.C.o.d -o CMakeFiles/gamer.dir/biom/PDB2Volume.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C +[ 31%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/r_sqrt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 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-I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_asin.c.o -MF CMakeFiles/vf2c.dir/d_asin.c.o.d -o CMakeFiles/vf2c.dir/d_asin.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_asin.c -[ 32%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_atan.c.o +[ 33%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_atan.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 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-I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_exp.c.o -MF CMakeFiles/vf2c.dir/d_exp.c.o.d -o CMakeFiles/vf2c.dir/d_exp.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_exp.c -[ 34%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_imag.c.o -[ 34%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_int.c.o +[ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_imag.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_imag.c.o -MF CMakeFiles/vf2c.dir/d_imag.c.o.d -o CMakeFiles/vf2c.dir/d_imag.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_imag.c +[ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_int.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT 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/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_lg10.c -[ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_log.c.o +[ 35%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadLattice.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadLattice.C.o -MF CMakeFiles/gamer.dir/biom/ReadLattice.C.o.d -o CMakeFiles/gamer.dir/biom/ReadLattice.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadLattice.C +[ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_log.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_log.c.o -MF CMakeFiles/vf2c.dir/d_log.c.o.d -o CMakeFiles/vf2c.dir/d_log.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_log.c -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp: In member function 'void tetgenmesh::constrainedfacets()': -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20804:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] -20804 | equatptlist = new list("point *"); - | ^~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20809:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] -20809 | horizptlist = new list("point *"); - | ^~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20810:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] -20810 | belowptlist = new list("point *"); - | ^~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:20811:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] -20811 | aboveptlist = new list("point *"); - | ^~~~~~~~~ -[ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_mod.c.o +[ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_mod.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_mod.c.o -MF CMakeFiles/vf2c.dir/d_mod.c.o.d -o CMakeFiles/vf2c.dir/d_mod.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_mod.c -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp: In member function 'long int tetgenmesh::reconstructmesh()': -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen/tetgen.cpp:24383:25: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] -24383 | markerlist = new list("int"); - | ^~~~~ -[ 35%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/MarchingCube.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/MarchingCube.C.o -MF CMakeFiles/gamer.dir/biom/MarchingCube.C.o.d -o CMakeFiles/gamer.dir/biom/MarchingCube.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/MarchingCube.C -[ 35%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_nint.c.o +[ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_nint.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_nint.c.o -MF CMakeFiles/vf2c.dir/d_nint.c.o.d -o CMakeFiles/vf2c.dir/d_nint.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_nint.c -[ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_prod.c.o +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C: In function 'float PDB2Volume(char*, float**, int*, int*, int*, float*, float*, ATOM**, int*, char)': +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C:85:11: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] + 85 | fscanf(fp,"%d\n",&m); + | ~~~~~~^~~~~~~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C:88:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] + 88 | fscanf(fp,"%f %f %f %f\n",&x,&y,&z,&radius); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_prod.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_prod.c.o -MF CMakeFiles/vf2c.dir/d_prod.c.o.d -o CMakeFiles/vf2c.dir/d_prod.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_prod.c -[ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sign.c.o +[ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sign.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sign.c.o -MF CMakeFiles/vf2c.dir/d_sign.c.o.d -o CMakeFiles/vf2c.dir/d_sign.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sign.c -[ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sin.c.o +[ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sin.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sin.c.o -MF CMakeFiles/vf2c.dir/d_sin.c.o.d -o CMakeFiles/vf2c.dir/d_sin.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sin.c -[ 36%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sinh.c.o +[ 37%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadPDB.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadPDB.C.o -MF CMakeFiles/gamer.dir/biom/ReadPDB.C.o.d -o CMakeFiles/gamer.dir/biom/ReadPDB.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadPDB.C +[ 37%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sinh.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sinh.c.o -MF CMakeFiles/vf2c.dir/d_sinh.c.o.d -o CMakeFiles/vf2c.dir/d_sinh.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sinh.c -[ 37%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o -MF CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o.d -o CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Mesh.C [ 38%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sqrt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_sqrt.c.o -MF CMakeFiles/vf2c.dir/d_sqrt.c.o.d -o CMakeFiles/vf2c.dir/d_sqrt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/d_sqrt.c [ 38%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/d_tan.c.o @@ -1981,10 +2031,10 @@ cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_abs.c.o -MF CMakeFiles/vf2c.dir/i_abs.c.o.d -o CMakeFiles/vf2c.dir/i_abs.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_abs.c [ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dim.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dim.c.o -MF CMakeFiles/vf2c.dir/i_dim.c.o.d -o CMakeFiles/vf2c.dir/i_dim.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_dim.c -[ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_indx.c.o [ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dnnt.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_indx.c.o -MF CMakeFiles/vf2c.dir/i_indx.c.o.d -o CMakeFiles/vf2c.dir/i_indx.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_indx.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_dnnt.c.o -MF CMakeFiles/vf2c.dir/i_dnnt.c.o.d -o CMakeFiles/vf2c.dir/i_dnnt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_dnnt.c +[ 39%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_indx.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_indx.c.o -MF CMakeFiles/vf2c.dir/i_indx.c.o.d -o CMakeFiles/vf2c.dir/i_indx.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_indx.c [ 40%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_len.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_len.c.o -MF CMakeFiles/vf2c.dir/i_len.c.o.d -o CMakeFiles/vf2c.dir/i_len.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_len.c [ 40%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_mod.c.o @@ -1993,161 +2043,148 @@ cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_nint.c.o -MF CMakeFiles/vf2c.dir/i_nint.c.o.d -o CMakeFiles/vf2c.dir/i_nint.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_nint.c [ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_sign.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/i_sign.c.o -MF CMakeFiles/vf2c.dir/i_sign.c.o.d -o CMakeFiles/vf2c.dir/i_sign.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/i_sign.c -[ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitbits.c.o +[ 42%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o -MF CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o.d -o CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C +[ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitbits.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitbits.c.o -MF CMakeFiles/vf2c.dir/lbitbits.c.o.d -o CMakeFiles/vf2c.dir/lbitbits.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/lbitbits.c -[ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitshft.c.o +[ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitshft.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lbitshft.c.o -MF CMakeFiles/vf2c.dir/lbitshft.c.o.d -o CMakeFiles/vf2c.dir/lbitshft.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/lbitshft.c -[ 41%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_abs.c.o +[ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_abs.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_abs.c.o -MF CMakeFiles/vf2c.dir/h_abs.c.o.d -o CMakeFiles/vf2c.dir/h_abs.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_abs.c -[ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dim.c.o +[ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dim.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dim.c.o -MF CMakeFiles/vf2c.dir/h_dim.c.o.d -o CMakeFiles/vf2c.dir/h_dim.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_dim.c -[ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dnnt.c.o +[ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dnnt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_dnnt.c.o -MF CMakeFiles/vf2c.dir/h_dnnt.c.o.d -o CMakeFiles/vf2c.dir/h_dnnt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_dnnt.c -[ 42%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_indx.c.o +[ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_indx.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT 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Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/RegionGrowing.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/RegionGrowing.C.o -MF CMakeFiles/gamer.dir/biom/RegionGrowing.C.o.d -o CMakeFiles/gamer.dir/biom/RegionGrowing.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/RegionGrowing.C +[ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_nint.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_nint.c.o -MF CMakeFiles/vf2c.dir/h_nint.c.o.d -o CMakeFiles/vf2c.dir/h_nint.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_nint.c -[ 43%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_sign.c.o +[ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_sign.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/h_sign.c.o -MF CMakeFiles/vf2c.dir/h_sign.c.o.d -o CMakeFiles/vf2c.dir/h_sign.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/h_sign.c -[ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_ge.c.o +[ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_ge.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_ge.c.o -MF CMakeFiles/vf2c.dir/l_ge.c.o.d -o CMakeFiles/vf2c.dir/l_ge.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_ge.c -[ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_le.c.o -[ 44%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_gt.c.o +[ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_gt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_gt.c.o -MF CMakeFiles/vf2c.dir/l_gt.c.o.d -o CMakeFiles/vf2c.dir/l_gt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_gt.c +[ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_le.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_le.c.o -MF CMakeFiles/vf2c.dir/l_le.c.o.d -o CMakeFiles/vf2c.dir/l_le.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_le.c -[ 44%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Volume.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/PDB2Volume.C.o -MF CMakeFiles/gamer.dir/biom/PDB2Volume.C.o.d -o CMakeFiles/gamer.dir/biom/PDB2Volume.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C -[ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_lt.c.o +[ 45%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o -MF CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o.d -o CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfaceMesh.C +[ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_lt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/l_lt.c.o -MF CMakeFiles/vf2c.dir/l_lt.c.o.d -o CMakeFiles/vf2c.dir/l_lt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/l_lt.c -[ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_ge.c.o +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C: In function 'SurfaceMesh* SurfaceMesh_readOFF(char*)': +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:401:14: warning: too many arguments for format [-Wformat-extra-args] + 401 | printf("Read error. Expected 3 integers for the first simplex.\n", n); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:494:14: warning: too many arguments for format [-Wformat-extra-args] + 494 | printf("Read error. Expected 4 integers for the first simplex.\n", n); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 47%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfExtract.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfExtract.C.o -MF CMakeFiles/gamer.dir/biom/SurfExtract.C.o.d -o CMakeFiles/gamer.dir/biom/SurfExtract.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfExtract.C +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C: In function 'GemMesh* GemMesh_fromSurfaceMesh(SurfaceMesh*, char*)': +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:754:17: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 754 | in.save_nodes("plc"); + | ^~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:755:16: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 755 | in.save_poly("plc"); + | ^~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:761:18: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 761 | out.save_nodes("result"); + | ^~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:762:21: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 762 | out.save_elements("result"); + | ^~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:763:18: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 763 | out.save_faces("result"); + | ^~~~~~~~ +[ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_ge.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_ge.c.o -MF CMakeFiles/vf2c.dir/hl_ge.c.o.d -o CMakeFiles/vf2c.dir/hl_ge.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_ge.c -[ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_gt.c.o +[ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_gt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_gt.c.o -MF CMakeFiles/vf2c.dir/hl_gt.c.o.d -o CMakeFiles/vf2c.dir/hl_gt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_gt.c -[ 45%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_le.c.o +[ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_le.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_le.c.o -MF CMakeFiles/vf2c.dir/hl_le.c.o.d -o CMakeFiles/vf2c.dir/hl_le.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_le.c -[ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_lt.c.o +[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_lt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/hl_lt.c.o -MF CMakeFiles/vf2c.dir/hl_lt.c.o.d -o CMakeFiles/vf2c.dir/hl_lt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/hl_lt.c -[ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1asc_.c.o +[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1asc_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1asc_.c.o -MF CMakeFiles/vf2c.dir/ef1asc_.c.o.d -o CMakeFiles/vf2c.dir/ef1asc_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ef1asc_.c -[ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1cmc_.c.o +[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1cmc_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ef1cmc_.c.o -MF CMakeFiles/vf2c.dir/ef1cmc_.c.o.d -o CMakeFiles/vf2c.dir/ef1cmc_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ef1cmc_.c -[ 46%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77_aloc.c.o +[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77_aloc.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/f77_aloc.c.o -MF CMakeFiles/vf2c.dir/f77_aloc.c.o.d -o CMakeFiles/vf2c.dir/f77_aloc.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/f77_aloc.c -[ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cat.c.o +[ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cat.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cat.c.o -MF CMakeFiles/vf2c.dir/s_cat.c.o.d -o CMakeFiles/vf2c.dir/s_cat.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_cat.c -[ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cmp.c.o +[ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cmp.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_cmp.c.o -MF CMakeFiles/vf2c.dir/s_cmp.c.o.d -o CMakeFiles/vf2c.dir/s_cmp.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_cmp.c -[ 47%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_copy.c.o +[ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_copy.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/s_copy.c.o -MF CMakeFiles/vf2c.dir/s_copy.c.o.d -o CMakeFiles/vf2c.dir/s_copy.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/s_copy.c -[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dtime_.c.o +[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dtime_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dtime_.c.o -MF CMakeFiles/vf2c.dir/dtime_.c.o.d -o CMakeFiles/vf2c.dir/dtime_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/dtime_.c -[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/etime_.c.o +[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/etime_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/etime_.c.o -MF CMakeFiles/vf2c.dir/etime_.c.o.d -o CMakeFiles/vf2c.dir/etime_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/etime_.c -[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/backspac.c.o +[ 50%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfRefine.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfRefine.C.o -MF CMakeFiles/gamer.dir/biom/SurfRefine.C.o.d -o CMakeFiles/gamer.dir/biom/SurfRefine.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfRefine.C +[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/backspac.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/backspac.c.o -MF CMakeFiles/vf2c.dir/backspac.c.o.d -o CMakeFiles/vf2c.dir/backspac.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/backspac.c +[ 50%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfSmooth.C.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -MF CMakeFiles/gamer.dir/biom/SurfSmooth.C.o.d -o CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfSmooth.C /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/backspac.c: In function 'f_back': /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/backspac.c:47:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 47 | fread((char *)&n,sizeof(uiolen),1,f); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 48%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/close.c.o +[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/close.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/close.c.o -MF CMakeFiles/vf2c.dir/close.c.o.d -o CMakeFiles/vf2c.dir/close.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/close.c -[ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dfe.c.o +[ 51%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dfe.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dfe.c.o -MF CMakeFiles/vf2c.dir/dfe.c.o.d -o CMakeFiles/vf2c.dir/dfe.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/dfe.c -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C: In function 'float PDB2Volume(char*, float**, int*, int*, int*, float*, float*, ATOM**, int*, char)': -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C:85:11: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] - 85 | fscanf(fp,"%d\n",&m); - | ~~~~~~^~~~~~~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/PDB2Volume.C:88:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] - 88 | fscanf(fp,"%f %f %f %f\n",&x,&y,&z,&radius); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dolio.c.o +[ 51%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dolio.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/dolio.c.o -MF CMakeFiles/vf2c.dir/dolio.c.o.d -o CMakeFiles/vf2c.dir/dolio.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/dolio.c -[ 49%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadLattice.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadLattice.C.o -MF CMakeFiles/gamer.dir/biom/ReadLattice.C.o.d -o CMakeFiles/gamer.dir/biom/ReadLattice.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadLattice.C -[ 49%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/due.c.o +[ 51%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/due.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/due.c.o -MF CMakeFiles/vf2c.dir/due.c.o.d -o CMakeFiles/vf2c.dir/due.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/due.c -[ 49%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadPDB.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadPDB.C.o -MF CMakeFiles/gamer.dir/biom/ReadPDB.C.o.d -o CMakeFiles/gamer.dir/biom/ReadPDB.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadPDB.C -[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/endfile.c.o +[ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/endfile.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/endfile.c.o -MF CMakeFiles/vf2c.dir/endfile.c.o.d -o CMakeFiles/vf2c.dir/endfile.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/endfile.c -[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/err.c.o +[ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/err.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/err.c.o -MF CMakeFiles/vf2c.dir/err.c.o.d -o CMakeFiles/vf2c.dir/err.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/err.c -[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmt.c.o +[ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmt.c.o -MF CMakeFiles/vf2c.dir/fmt.c.o.d -o CMakeFiles/vf2c.dir/fmt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/fmt.c -[ 50%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmtlib.c.o +[ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmtlib.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/fmtlib.c.o -MF CMakeFiles/vf2c.dir/fmtlib.c.o.d -o CMakeFiles/vf2c.dir/fmtlib.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/fmtlib.c -[ 51%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ftell_.c.o +[ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ftell_.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ftell_.c.o -MF CMakeFiles/vf2c.dir/ftell_.c.o.d -o CMakeFiles/vf2c.dir/ftell_.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ftell_.c -[ 52%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o -MF CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o.d -o CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C -[ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/iio.c.o +[ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/iio.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/iio.c.o -MF CMakeFiles/vf2c.dir/iio.c.o.d -o CMakeFiles/vf2c.dir/iio.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/iio.c -[ 52%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ilnw.c.o +[ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ilnw.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/ilnw.c.o -MF CMakeFiles/vf2c.dir/ilnw.c.o.d -o CMakeFiles/vf2c.dir/ilnw.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/ilnw.c -[ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/inquire.c.o +[ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/inquire.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/inquire.c.o -MF CMakeFiles/vf2c.dir/inquire.c.o.d -o CMakeFiles/vf2c.dir/inquire.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/inquire.c -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C: In function 'SurfaceMesh* SurfaceMesh_readOFF(char*)': -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:401:14: warning: too many arguments for format [-Wformat-extra-args] - 401 | printf("Read error. Expected 3 integers for the first simplex.\n", n); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:494:14: warning: too many arguments for format [-Wformat-extra-args] - 494 | printf("Read error. Expected 4 integers for the first simplex.\n", n); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C: In function 'GemMesh* GemMesh_fromSurfaceMesh(SurfaceMesh*, char*)': -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:754:17: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 754 | in.save_nodes("plc"); - | ^~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:755:16: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 755 | in.save_poly("plc"); - | ^~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:761:18: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 761 | out.save_nodes("result"); - | ^~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:762:21: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 762 | out.save_elements("result"); - | ^~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/ReadWriteMesh.C:763:18: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 763 | out.save_faces("result"); - | ^~~~~~~~ -[ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lread.c.o +[ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lread.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lread.c.o -MF CMakeFiles/vf2c.dir/lread.c.o.d -o CMakeFiles/vf2c.dir/lread.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/lread.c -[ 53%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/RegionGrowing.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/RegionGrowing.C.o -MF CMakeFiles/gamer.dir/biom/RegionGrowing.C.o.d -o CMakeFiles/gamer.dir/biom/RegionGrowing.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/RegionGrowing.C -[ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lwrite.c.o +[ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lwrite.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/lwrite.c.o -MF CMakeFiles/vf2c.dir/lwrite.c.o.d -o CMakeFiles/vf2c.dir/lwrite.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/lwrite.c -[ 53%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o -MF CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o.d -o CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfaceMesh.C -[ 53%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/open.c.o +[ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/open.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/open.c.o -MF CMakeFiles/vf2c.dir/open.c.o.d -o CMakeFiles/vf2c.dir/open.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/open.c -[ 54%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rdfmt.c.o +[ 55%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rdfmt.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rdfmt.c.o -MF CMakeFiles/vf2c.dir/rdfmt.c.o.d -o CMakeFiles/vf2c.dir/rdfmt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/rdfmt.c -[ 55%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfExtract.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfExtract.C.o -MF CMakeFiles/gamer.dir/biom/SurfExtract.C.o.d -o CMakeFiles/gamer.dir/biom/SurfExtract.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfExtract.C [ 55%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rewind.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rewind.c.o -MF CMakeFiles/vf2c.dir/rewind.c.o.d -o CMakeFiles/vf2c.dir/rewind.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/rewind.c [ 55%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsfe.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsfe.c.o -MF CMakeFiles/vf2c.dir/rsfe.c.o.d -o CMakeFiles/vf2c.dir/rsfe.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/rsfe.c [ 56%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsli.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsli.c.o -MF CMakeFiles/vf2c.dir/rsli.c.o.d -o CMakeFiles/vf2c.dir/rsli.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/rsli.c -[ 56%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfRefine.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfRefine.C.o -MF CMakeFiles/gamer.dir/biom/SurfRefine.C.o.d -o CMakeFiles/gamer.dir/biom/SurfRefine.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfRefine.C [ 56%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsne.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/rsne.c.o -MF CMakeFiles/vf2c.dir/rsne.c.o.d -o CMakeFiles/vf2c.dir/rsne.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/rsne.c [ 56%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sfe.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sfe.c.o -MF CMakeFiles/vf2c.dir/sfe.c.o.d -o CMakeFiles/vf2c.dir/sfe.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/sfe.c [ 56%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sue.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/sue.c.o -MF CMakeFiles/vf2c.dir/sue.c.o.d -o CMakeFiles/vf2c.dir/sue.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/sue.c -[ 56%] Building CXX object _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/c++ -Dgamer_EXPORTS -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/triangle -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/tetgen -I/build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/gamer/src/CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -MF CMakeFiles/gamer.dir/biom/SurfSmooth.C.o.d -o CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -c /build/apbs-3.4.1/debian/external_deps/fetk/gamer/src/biom/SurfSmooth.C [ 57%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/typesize.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/typesize.c.o -MF CMakeFiles/vf2c.dir/typesize.c.o.d -o CMakeFiles/vf2c.dir/typesize.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/typesize.c [ 57%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uio.c.o -[ 57%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/util.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/uio.c.o -MF CMakeFiles/vf2c.dir/uio.c.o.d -o CMakeFiles/vf2c.dir/uio.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/uio.c +[ 57%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/util.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/util.c.o -MF CMakeFiles/vf2c.dir/util.c.o.d -o CMakeFiles/vf2c.dir/util.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/util.c [ 58%] Building C object _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wref.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src/vf2c && /usr/bin/cc -Dvf2c_EXPORTS -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/punc/src/vf2c/CMakeFiles/vf2c.dir/wref.c.o -MF CMakeFiles/vf2c.dir/wref.c.o.d -o CMakeFiles/vf2c.dir/wref.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/wref.c @@ -2192,20 +2229,22 @@ make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f _deps/fetk-build/mc/src/CMakeFiles/mc.dir/build.make _deps/fetk-build/mc/src/CMakeFiles/mc.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/base/mc_base.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/base/mc_base.c.o -MF CMakeFiles/mc.dir/base/mc_base.c.o.d -o CMakeFiles/mc.dir/base/mc_base.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc_base.c +[ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bvec.c.o [ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bmat.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bmat.c.o -MF CMakeFiles/mc.dir/bam/bmat.c.o.d -o CMakeFiles/mc.dir/bam/bmat.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c -[ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bvec.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bvec.c.o -MF CMakeFiles/mc.dir/bam/bvec.c.o.d -o CMakeFiles/mc.dir/bam/bvec.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bvec.c +[ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/base/mc_base.c.o [ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bsolv.c.o -[ 61%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matcopy.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/base/mc_base.c.o -MF CMakeFiles/mc.dir/base/mc_base.c.o.d -o CMakeFiles/mc.dir/base/mc_base.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc_base.c [ 62%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mat.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bsolv.c.o -MF CMakeFiles/mc.dir/bam/bsolv.c.o.d -o CMakeFiles/mc.dir/bam/bsolv.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matcopy.c.o -MF CMakeFiles/mc.dir/bam/matcopy.c.o.d -o CMakeFiles/mc.dir/bam/matcopy.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/matcopy.c +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/bvec.c.o -MF CMakeFiles/mc.dir/bam/bvec.c.o.d -o CMakeFiles/mc.dir/bam/bvec.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bvec.c +[ 62%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matcopy.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mat.c.o -MF CMakeFiles/mc.dir/bam/mat.c.o.d -o CMakeFiles/mc.dir/bam/mat.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/mat.c +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matcopy.c.o -MF CMakeFiles/mc.dir/bam/matcopy.c.o.d -o CMakeFiles/mc.dir/bam/matcopy.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/matcopy.c [ 62%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matln.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/matln.c.o -MF CMakeFiles/mc.dir/bam/matln.c.o.d -o CMakeFiles/mc.dir/bam/matln.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/matln.c +[ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mtool.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mtool.c.o -MF CMakeFiles/mc.dir/bam/mtool.c.o.d -o CMakeFiles/mc.dir/bam/mtool.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/mtool.c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c: In function 'Bmat_ctor': /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:104:36: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 5 and 14 [-Wformat-overflow=] 104 | sprintf(bname, "%s_%d%d", thee->name, p, q); @@ -2263,6 +2302,23 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c: In function 'Bmat_galerkin': +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:36: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 5 and 14 [-Wformat-overflow=] + 1018 | sprintf(bname, "%s_%d%d", thee->name, p, q); + | ^~ +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:32: note: directive argument in the range [0, 2147483646] + 1018 | sprintf(bname, "%s_%d%d", thee->name, p, q); + | ^~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:32: note: directive argument in the range [0, 2147483646] +In function 'sprintf', + inlined from 'Bmat_galerkin' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:17: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 4 and 31 bytes into a destination of size 15 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function 'Bvec_cg': /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:631:28: warning: '%s' directive writing up to 79 bytes into a region of size 73 [-Wformat-overflow=] 631 | sprintf(rn,"Bvec_cg%s",rmeth); @@ -2289,8 +2345,10 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -[ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mtool.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/mtool.c.o -MF CMakeFiles/mc.dir/bam/mtool.c.o.d -o CMakeFiles/mc.dir/bam/mtool.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/mtool.c +[ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/slu.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/slu.c.o -MF CMakeFiles/mc.dir/bam/slu.c.o.d -o CMakeFiles/mc.dir/bam/slu.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/slu.c +[ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec.c.o -MF CMakeFiles/mc.dir/bam/vec.c.o.d -o CMakeFiles/mc.dir/bam/vec.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/vec.c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c: In function 'Bvec_cgnr': /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bsolv.c:1422:30: warning: '%s' directive writing up to 79 bytes into a region of size 71 [-Wformat-overflow=] 1422 | sprintf(rn,"Bvec_cgnr%s",rmeth); @@ -2317,27 +2375,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c: In function 'Bmat_galerkin': -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:36: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 5 and 14 [-Wformat-overflow=] - 1018 | sprintf(bname, "%s_%d%d", thee->name, p, q); - | ^~ -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:32: note: directive argument in the range [0, 2147483646] - 1018 | sprintf(bname, "%s_%d%d", thee->name, p, q); - | ^~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:32: note: directive argument in the range [0, 2147483646] -In function 'sprintf', - inlined from 'Bmat_galerkin' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/bmat.c:1018:17: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 4 and 31 bytes into a destination of size 15 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ -[ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/slu.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/slu.c.o -MF CMakeFiles/mc.dir/bam/slu.c.o.d -o CMakeFiles/mc.dir/bam/slu.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/slu.c -[ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec.c.o -MF CMakeFiles/mc.dir/bam/vec.c.o.d -o CMakeFiles/mc.dir/bam/vec.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/vec.c [ 63%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec3.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/vec3.c.o -MF CMakeFiles/mc.dir/bam/vec3.c.o.d -o CMakeFiles/mc.dir/bam/vec3.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam/vec3.c [ 64%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/bam/zslu.c.o @@ -2345,42 +2382,9 @@ [ 64%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/whb.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/whb.c.o -MF CMakeFiles/mc.dir/whb/whb.c.o.d -o CMakeFiles/mc.dir/whb/whb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/whb.c [ 64%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/bvechb.c.o -[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/hbtools.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/bvechb.c.o -MF CMakeFiles/mc.dir/whb/bvechb.c.o.d -o CMakeFiles/mc.dir/whb/bvechb.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c -[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/rcmat.c.o +[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/hbtools.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/hbtools.c.o -MF CMakeFiles/mc.dir/whb/hbtools.c.o.d -o CMakeFiles/mc.dir/whb/hbtools.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/rcmat.c.o -MF CMakeFiles/mc.dir/whb/rcmat.c.o.d -o CMakeFiles/mc.dir/whb/rcmat.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/rcmat.c -[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/brcmat.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/brcmat.c.o -MF CMakeFiles/mc.dir/whb/brcmat.c.o.d -o CMakeFiles/mc.dir/whb/brcmat.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/brcmat.c -[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/subopt.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/subopt.c.o -MF CMakeFiles/mc.dir/whb/subopt.c.o.d -o CMakeFiles/mc.dir/whb/subopt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c -[ 66%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/aprx.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/aprx.c.o -MF CMakeFiles/mc.dir/aprx/aprx.c.o.d -o CMakeFiles/mc.dir/aprx/aprx.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/aprx.c -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c: In function 'Bvec_ctorPoint': -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:28: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 5 and 14 [-Wformat-overflow=] - 291 | sprintf(bname, "%s_%d", thee->name, p); - | ^~ -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:24: note: directive argument in the range [0, 2147483646] - 291 | sprintf(bname, "%s_%d", thee->name, p); - | ^~~~~~~ -In file included from /usr/include/stdio.h:906, - from /usr/include/maloc/maloc_base.h:80, - from /usr/include/maloc/maloc.h:38, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/mc/whb.h:50, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools_p.h:37, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:34: -In function 'sprintf', - inlined from 'Bvec_ctorPoint' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:9: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 21 bytes into a destination of size 15 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ -[ 66%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/assem.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/assem.c.o -MF CMakeFiles/mc.dir/aprx/assem.c.o.d -o CMakeFiles/mc.dir/aprx/assem.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/assem.c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c: In function 'Bvec_hcg': /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:267:29: warning: '%s' directive writing up to 79 bytes into a region of size 72 [-Wformat-overflow=] 267 | sprintf(rn,"Bvec_hcg%s",rmeth); @@ -2414,10 +2418,31 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -[ 66%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/bnode.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/bnode.c.o -MF CMakeFiles/mc.dir/aprx/bnode.c.o.d -o CMakeFiles/mc.dir/aprx/bnode.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/bnode.c -[ 67%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/estim.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/estim.c.o -MF CMakeFiles/mc.dir/aprx/estim.c.o.d -o CMakeFiles/mc.dir/aprx/estim.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/estim.c +[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/rcmat.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/rcmat.c.o -MF CMakeFiles/mc.dir/whb/rcmat.c.o.d -o CMakeFiles/mc.dir/whb/rcmat.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/rcmat.c +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c: In function 'Bvec_ctorPoint': +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:28: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 5 and 14 [-Wformat-overflow=] + 291 | sprintf(bname, "%s_%d", thee->name, p); + | ^~ +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:24: note: directive argument in the range [0, 2147483646] + 291 | sprintf(bname, "%s_%d", thee->name, p); + | ^~~~~~~ +In file included from /usr/include/stdio.h:906, + from /usr/include/maloc/maloc_base.h:80, + from /usr/include/maloc/maloc.h:38, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/mc/whb.h:50, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools_p.h:37, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:34: +In function 'sprintf', + inlined from 'Bvec_ctorPoint' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/hbtools.c:291:9: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 3 and 21 bytes into a destination of size 15 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c: In function 'Bvec_hbcg': /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/bvechb.c:474:30: warning: '%s' directive writing up to 79 bytes into a region of size 71 [-Wformat-overflow=] 474 | sprintf(rn,"Bvec_hbcg%s",rmeth); @@ -2444,6 +2469,18 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/brcmat.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/brcmat.c.o -MF CMakeFiles/mc.dir/whb/brcmat.c.o.d -o CMakeFiles/mc.dir/whb/brcmat.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/brcmat.c +[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/subopt.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/whb/subopt.c.o -MF CMakeFiles/mc.dir/whb/subopt.c.o.d -o CMakeFiles/mc.dir/whb/subopt.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c +[ 65%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/assem.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/assem.c.o -MF CMakeFiles/mc.dir/aprx/assem.c.o.d -o CMakeFiles/mc.dir/aprx/assem.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/assem.c +[ 66%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/aprx.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/aprx.c.o -MF CMakeFiles/mc.dir/aprx/aprx.c.o.d -o CMakeFiles/mc.dir/aprx/aprx.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/aprx.c +[ 66%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/bnode.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/bnode.c.o -MF CMakeFiles/mc.dir/aprx/bnode.c.o.d -o CMakeFiles/mc.dir/aprx/bnode.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/bnode.c +[ 67%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/estim.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/estim.c.o -MF CMakeFiles/mc.dir/aprx/estim.c.o.d -o CMakeFiles/mc.dir/aprx/estim.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/estim.c [ 67%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/eval.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/eval.c.o -MF CMakeFiles/mc.dir/aprx/eval.c.o.d -o CMakeFiles/mc.dir/aprx/eval.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx/eval.c [ 67%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/aprx/io.c.o @@ -2500,6 +2537,8 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +[ 68%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/vel.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/vel.c.o -MF CMakeFiles/mc.dir/gem/vel.c.o.d -o CMakeFiles/mc.dir/gem/vel.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/vel.c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c: In function 'Bvec_submethod': /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb/subopt.c:495:31: warning: '%s' directive writing up to 79 bytes into a region of size 70 [-Wformat-overflow=] 495 | sprintf(rn,"Bvec_sfpcg%s",rmeth); @@ -2563,18 +2602,16 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -[ 68%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/vel.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/vel.c.o -MF CMakeFiles/mc.dir/gem/vel.c.o.d -o CMakeFiles/mc.dir/gem/vel.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/vel.c [ 69%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/ves.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/ves.c.o -MF CMakeFiles/mc.dir/gem/ves.c.o.d -o CMakeFiles/mc.dir/gem/ves.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/ves.c [ 69%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gem.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gem.c.o -MF CMakeFiles/mc.dir/gem/gem.c.o.d -o CMakeFiles/mc.dir/gem/gem.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gem.c [ 69%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemchk.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemchk.c.o -MF CMakeFiles/mc.dir/gem/gemchk.c.o.d -o CMakeFiles/mc.dir/gem/gemchk.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemchk.c +[ 69%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemdisp.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemdisp.c.o -MF CMakeFiles/mc.dir/gem/gemdisp.c.o.d -o CMakeFiles/mc.dir/gem/gemdisp.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c [ 70%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemg.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemg.c.o -MF CMakeFiles/mc.dir/gem/gemg.c.o.d -o CMakeFiles/mc.dir/gem/gemg.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemg.c -[ 70%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemdisp.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemdisp.c.o -MF CMakeFiles/mc.dir/gem/gemdisp.c.o.d -o CMakeFiles/mc.dir/gem/gemdisp.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c [ 70%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemgen.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemgen.c.o -MF CMakeFiles/mc.dir/gem/gemgen.c.o.d -o CMakeFiles/mc.dir/gem/gemgen.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c [ 70%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemio.c.o @@ -2609,6 +2646,12 @@ cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemunref.c.o -MF CMakeFiles/mc.dir/gem/gemunref.c.o.d -o CMakeFiles/mc.dir/gem/gemunref.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemunref.c [ 71%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemcube.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/gem/gemcube.c.o -MF CMakeFiles/mc.dir/gem/gemcube.c.o.d -o CMakeFiles/mc.dir/gem/gemcube.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemcube.c +[ 71%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/pde/pde.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/pde/pde.c.o -MF CMakeFiles/mc.dir/pde/pde.c.o.d -o CMakeFiles/mc.dir/pde/pde.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde/pde.c +[ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/am.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/am.c.o -MF CMakeFiles/mc.dir/nam/am.c.o.d -o CMakeFiles/mc.dir/nam/am.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/am.c +[ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/lsolv.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/lsolv.c.o -MF CMakeFiles/mc.dir/nam/lsolv.c.o.d -o CMakeFiles/mc.dir/nam/lsolv.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/lsolv.c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:522:5: warning: 'Gem_writeGV' accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 522 | Gem_writeGV(thee,sock,0,0,0,1.0,0,defX); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2630,8 +2673,6 @@ /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3117:15: note: in a call to function 'Gem_writeGV' 3117 | VEXTERNC void Gem_writeGV(Gem *thee, Vio *sock, | ^~~~~~~~~~~ -[ 71%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/pde/pde.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/pde/pde.c.o -MF CMakeFiles/mc.dir/pde/pde.c.o.d -o CMakeFiles/mc.dir/pde/pde.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde/pde.c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemgen.c:522:5: warning: 'Gem_writeGV' accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 522 | Gem_writeGV(thee,sock,0,0,0,1.0,0,defX); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2653,10 +2694,6 @@ /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3117:15: note: in a call to function 'Gem_writeGV' 3117 | VEXTERNC void Gem_writeGV(Gem *thee, Vio *sock, | ^~~~~~~~~~~ -[ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/am.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/am.c.o -MF CMakeFiles/mc.dir/nam/am.c.o.d -o CMakeFiles/mc.dir/nam/am.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/am.c -[ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/lsolv.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/lsolv.c.o -MF CMakeFiles/mc.dir/nam/lsolv.c.o.d -o CMakeFiles/mc.dir/nam/lsolv.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/lsolv.c [ 72%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/nsolv.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/nam/nsolv.c.o -MF CMakeFiles/mc.dir/nam/nsolv.c.o.d -o CMakeFiles/mc.dir/nam/nsolv.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam/nsolv.c [ 73%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/dyn/dyn.c.o @@ -2665,6 +2702,39 @@ cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/dyn/svio.c.o -MF CMakeFiles/mc.dir/dyn/svio.c.o.d -o CMakeFiles/mc.dir/dyn/svio.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn/svio.c [ 73%] Building C object _deps/fetk-build/mc/src/CMakeFiles/mc.dir/mcsh/mcsh.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src && /usr/bin/cc -Dmc_EXPORTS -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -O2 -g -DNDEBUG -fPIC -fPIC -MD -MT _deps/fetk-build/mc/src/CMakeFiles/mc.dir/mcsh/mcsh.c.o -MF CMakeFiles/mc.dir/mcsh/mcsh.c.o.d -o CMakeFiles/mc.dir/mcsh/mcsh.c.o -c /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c: In function 'Gem_writeTEC': +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1656:33: warning: '__builtin___sprintf_chk' writing a terminating nul past the end of the destination [-Wformat-overflow=] + 1656 | sprintf(str1,"TETRAHEDRA"); + | ^ +In file included from /usr/include/stdio.h:906, + from /usr/include/maloc/maloc_base.h:80, + from /usr/include/maloc/maloc.h:38, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:41, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gem_p.h:37, + from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:34: +In function 'sprintf', + inlined from 'Gem_writeTEC' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1656:9: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 11 bytes into a destination of size 10 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c: In function 'Gem_writeTEC': +/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1657:33: warning: 'TETRAHEDRON' directive writing 11 bytes into a region of size 10 [-Wformat-overflow=] + 1657 | sprintf(str2,"TETRAHEDRON"); + | ~~~~~~~~~~^ +In function 'sprintf', + inlined from 'Gem_writeTEC' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1657:9: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 12 bytes into a destination of size 10 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c: In function 'MCsh_builtIn': /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c:765:9: warning: 'Gem_writeGEOM' accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 765 | Gem_writeGEOM(thee->gm, @@ -2718,39 +2788,6 @@ /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:3036:15: note: in a call to function 'Gem_writeGEOM' 3036 | VEXTERNC void Gem_writeGEOM(Gem *thee, Vio *sock, | ^~~~~~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c: In function 'Gem_writeTEC': -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1656:33: warning: '__builtin___sprintf_chk' writing a terminating nul past the end of the destination [-Wformat-overflow=] - 1656 | sprintf(str1,"TETRAHEDRA"); - | ^ -In file included from /usr/include/stdio.h:906, - from /usr/include/maloc/maloc_base.h:80, - from /usr/include/maloc/maloc.h:38, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base/mc/mc_base.h:40, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/mc/gem.h:41, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gem_p.h:37, - from /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:34: -In function 'sprintf', - inlined from 'Gem_writeTEC' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1656:9: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 11 bytes into a destination of size 10 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c: In function 'Gem_writeTEC': -/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1657:33: warning: 'TETRAHEDRON' directive writing 11 bytes into a region of size 10 [-Wformat-overflow=] - 1657 | sprintf(str2,"TETRAHEDRON"); - | ~~~~~~~~~~^ -In function 'sprintf', - inlined from 'Gem_writeTEC' at /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem/gemdisp.c:1657:9: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 12 bytes into a destination of size 10 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ /build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh/mcsh.c:765:9: warning: 'Gem_writeGEOM' accessing 32 bytes in a region of size 24 [-Wstringop-overflow=] 765 | Gem_writeGEOM(thee->gm, | ^~~~~~~~~~~~~~~~~~~~~~~ @@ -2850,8 +2887,8 @@ make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' [ 73%] Built target mc make -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/depend -make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/depend cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/src/generic /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/src/pmgc /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake --color= @@ -2862,19 +2899,19 @@ make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' [ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o -[ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o -MF CMakeFiles/apbs_generic.dir/nosh.c.o.d -o CMakeFiles/apbs_generic.dir/nosh.c.o -c /build/apbs-3.4.1/src/generic/nosh.c -[ 75%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o [ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o -MF CMakeFiles/apbs_generic.dir/femparm.c.o.d -o CMakeFiles/apbs_generic.dir/femparm.c.o -c /build/apbs-3.4.1/src/generic/femparm.c -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildAd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildAd.c.o -c /build/apbs-3.4.1/src/pmgc/buildAd.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o -MF CMakeFiles/apbs_generic.dir/mgparm.c.o.d -o CMakeFiles/apbs_generic.dir/mgparm.c.o -c /build/apbs-3.4.1/src/generic/mgparm.c -[ 75%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o +[ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o +[ 74%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o -MF CMakeFiles/apbs_generic.dir/femparm.c.o.d -o CMakeFiles/apbs_generic.dir/femparm.c.o -c /build/apbs-3.4.1/src/generic/femparm.c +[ 75%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o -MF CMakeFiles/apbs_generic.dir/pbamparm.c.o.d -o CMakeFiles/apbs_generic.dir/pbamparm.c.o -c /build/apbs-3.4.1/src/generic/pbamparm.c -[ 75%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildBd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildBd.c.o -c /build/apbs-3.4.1/src/pmgc/buildBd.c -[ 76%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o -MF CMakeFiles/apbs_generic.dir/pbsamparm.c.o.d -o CMakeFiles/apbs_generic.dir/pbsamparm.c.o -c /build/apbs-3.4.1/src/generic/pbsamparm.c +[ 76%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildAd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildAd.c.o -c /build/apbs-3.4.1/src/pmgc/buildAd.c +[ 76%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o -MF CMakeFiles/apbs_pmgc.dir/buildBd.c.o.d -o CMakeFiles/apbs_pmgc.dir/buildBd.c.o -c /build/apbs-3.4.1/src/pmgc/buildBd.c [ 76%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o -MF CMakeFiles/apbs_generic.dir/pbeparm.c.o.d -o CMakeFiles/apbs_generic.dir/pbeparm.c.o -c /build/apbs-3.4.1/src/generic/pbeparm.c [ 76%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o @@ -2915,46 +2952,46 @@ cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgcsd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -c /build/apbs-3.4.1/src/pmgc/mgcsd.c [ 81%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -c /build/apbs-3.4.1/src/pmgc/mgdrvd.c -[ 81%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgsubd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -c /build/apbs-3.4.1/src/pmgc/mgsubd.c [ 82%] Linking C shared library libapbs_generic.so cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_generic.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libapbs_generic.so.3 -o libapbs_generic.so.3 CMakeFiles/apbs_generic.dir/nosh.c.o CMakeFiles/apbs_generic.dir/mgparm.c.o CMakeFiles/apbs_generic.dir/femparm.c.o CMakeFiles/apbs_generic.dir/pbamparm.c.o CMakeFiles/apbs_generic.dir/pbsamparm.c.o CMakeFiles/apbs_generic.dir/pbeparm.c.o CMakeFiles/apbs_generic.dir/bemparm.c.o CMakeFiles/apbs_generic.dir/geoflowparm.c.o CMakeFiles/apbs_generic.dir/apolparm.c.o CMakeFiles/apbs_generic.dir/vacc.c.o CMakeFiles/apbs_generic.dir/valist.c.o CMakeFiles/apbs_generic.dir/vatom.c.o CMakeFiles/apbs_generic.dir/vpbe.c.o CMakeFiles/apbs_generic.dir/vcap.c.o CMakeFiles/apbs_generic.dir/vclist.c.o CMakeFiles/apbs_generic.dir/vstring.c.o CMakeFiles/apbs_generic.dir/vparam.c.o CMakeFiles/apbs_generic.dir/vgreen.c.o ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so /usr/lib/aarch64-linux-gnu/libblas.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 /usr/lib/aarch64-linux-gnu/libblas.so -[ 82%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -MF CMakeFiles/apbs_pmgc.dir/mikpckd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -c /build/apbs-3.4.1/src/pmgc/mikpckd.c +[ 82%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgsubd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -c /build/apbs-3.4.1/src/pmgc/mgsubd.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/generic && /usr/bin/cmake -E cmake_symlink_library libapbs_generic.so.3 libapbs_generic.so.3 libapbs_generic.so make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -MF CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -c /build/apbs-3.4.1/src/pmgc/mlinpckd.c -[ 83%] Built target apbs_generic +[ 82%] Built target apbs_generic make -f src/fem/CMakeFiles/apbs_fem.dir/build.make src/fem/CMakeFiles/apbs_fem.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/src/fem /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/fem /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/fem/CMakeFiles/apbs_fem.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f src/fem/CMakeFiles/apbs_fem.dir/build.make src/fem/CMakeFiles/apbs_fem.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 83%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vcsm.c.o +[ 82%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vcsm.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/fem && /usr/bin/cc -Dapbs_fem_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vcsm.c.o -MF CMakeFiles/apbs_fem.dir/vcsm.c.o.d -o CMakeFiles/apbs_fem.dir/vcsm.c.o -c /build/apbs-3.4.1/src/fem/vcsm.c +[ 82%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -MF CMakeFiles/apbs_pmgc.dir/mikpckd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -c /build/apbs-3.4.1/src/pmgc/mikpckd.c +[ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -MF CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -c /build/apbs-3.4.1/src/pmgc/mlinpckd.c [ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o -MF CMakeFiles/apbs_pmgc.dir/mypdec.c.o.d -o CMakeFiles/apbs_pmgc.dir/mypdec.c.o -c /build/apbs-3.4.1/src/pmgc/mypdec.c -[ 83%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o +[ 84%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vfetk.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/fem && /usr/bin/cc -Dapbs_fem_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vfetk.c.o -MF CMakeFiles/apbs_fem.dir/vfetk.c.o.d -o CMakeFiles/apbs_fem.dir/vfetk.c.o -c /build/apbs-3.4.1/src/fem/vfetk.c +[ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o -MF CMakeFiles/apbs_pmgc.dir/newtond.c.o.d -o CMakeFiles/apbs_pmgc.dir/newtond.c.o -c /build/apbs-3.4.1/src/pmgc/newtond.c -[ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o +[ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o -MF CMakeFiles/apbs_pmgc.dir/newdrvd.c.o.d -o CMakeFiles/apbs_pmgc.dir/newdrvd.c.o -c /build/apbs-3.4.1/src/pmgc/newdrvd.c -[ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o +[ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o -MF CMakeFiles/apbs_pmgc.dir/powerd.c.o.d -o CMakeFiles/apbs_pmgc.dir/powerd.c.o -c /build/apbs-3.4.1/src/pmgc/powerd.c -[ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o -MF CMakeFiles/apbs_pmgc.dir/smoothd.c.o.d -o CMakeFiles/apbs_pmgc.dir/smoothd.c.o -c /build/apbs-3.4.1/src/pmgc/smoothd.c -[ 84%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgfasd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -c /build/apbs-3.4.1/src/pmgc/mgfasd.c -[ 85%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vfetk.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/fem && /usr/bin/cc -Dapbs_fem_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vfetk.c.o -MF CMakeFiles/apbs_fem.dir/vfetk.c.o.d -o CMakeFiles/apbs_fem.dir/vfetk.c.o -c /build/apbs-3.4.1/src/fem/vfetk.c -[ 85%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vpee.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/fem && /usr/bin/cc -Dapbs_fem_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vpee.c.o -MF CMakeFiles/apbs_fem.dir/vpee.c.o.d -o CMakeFiles/apbs_fem.dir/vpee.c.o -c /build/apbs-3.4.1/src/fem/vpee.c /build/apbs-3.4.1/src/fem/vfetk.c: In function 'Vfetk_PDE_ctor2': /build/apbs-3.4.1/src/fem/vfetk.c:1211:24: warning: assignment to 'void (*)(struct sPDE *, int, int, double *, double *, double (*)[3])' from incompatible pointer type 'void (*)(PDE *, int, int, double *, double *)' {aka 'void (*)(struct sPDE *, int, int, double *, double *)'} [-Wincompatible-pointer-types] 1211 | thee->u_T = Vfetk_PDE_u_T; | ^ +[ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o -MF CMakeFiles/apbs_pmgc.dir/smoothd.c.o.d -o CMakeFiles/apbs_pmgc.dir/smoothd.c.o -c /build/apbs-3.4.1/src/pmgc/smoothd.c +[ 85%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -MF CMakeFiles/apbs_pmgc.dir/mgfasd.c.o.d -o CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -c /build/apbs-3.4.1/src/pmgc/mgfasd.c +[ 85%] Building C object src/fem/CMakeFiles/apbs_fem.dir/vpee.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/fem && /usr/bin/cc -Dapbs_fem_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/fem/CMakeFiles/apbs_fem.dir/vpee.c.o -MF CMakeFiles/apbs_fem.dir/vpee.c.o.d -o CMakeFiles/apbs_fem.dir/vpee.c.o -c /build/apbs-3.4.1/src/fem/vpee.c /build/apbs-3.4.1/src/fem/vfetk.c: In function 'Bmat_printHB': /build/apbs-3.4.1/src/fem/vfetk.c:1073:28: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 1073 | sprintf(ptrfmt,"(%dI%d)",nptrline,numZdigits+1); @@ -3036,16 +3073,16 @@ make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 86%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o -MF CMakeFiles/apbs_mg.dir/vpmg.c.o.d -o CMakeFiles/apbs_mg.dir/vpmg.c.o -c /build/apbs-3.4.1/src/mg/vpmg.c [ 86%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o -[ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o -[ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o -[ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o -MF CMakeFiles/apbs_mg.dir/vpmgp.c.o.d -o CMakeFiles/apbs_mg.dir/vpmgp.c.o -c /build/apbs-3.4.1/src/mg/vpmgp.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o -MF CMakeFiles/apbs_mg.dir/vgrid.c.o.d -o CMakeFiles/apbs_mg.dir/vgrid.c.o -c /build/apbs-3.4.1/src/mg/vgrid.c +[ 86%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o -MF CMakeFiles/apbs_mg.dir/vmgrid.c.o.d -o CMakeFiles/apbs_mg.dir/vmgrid.c.o -c /build/apbs-3.4.1/src/mg/vmgrid.c +[ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o -MF CMakeFiles/apbs_mg.dir/vopot.c.o.d -o CMakeFiles/apbs_mg.dir/vopot.c.o -c /build/apbs-3.4.1/src/mg/vopot.c +[ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o -MF CMakeFiles/apbs_mg.dir/vpmgp.c.o.d -o CMakeFiles/apbs_mg.dir/vpmgp.c.o -c /build/apbs-3.4.1/src/mg/vpmgp.c +[ 87%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o -MF CMakeFiles/apbs_mg.dir/vpmg.c.o.d -o CMakeFiles/apbs_mg.dir/vpmg.c.o -c /build/apbs-3.4.1/src/mg/vpmg.c /build/apbs-3.4.1/src/mg/vgrid.c: In function 'Vgrid_readDXBIN': /build/apbs-3.4.1/src/mg/vgrid.c:853:7: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 853 | fgets(tok, VMAX_BUFSIZE, fd); @@ -3053,7 +3090,10 @@ [ 87%] Linking C shared library libapbs_mg.so cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_mg.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libapbs_mg.so.3 -o libapbs_mg.so.3 CMakeFiles/apbs_mg.dir/vgrid.c.o CMakeFiles/apbs_mg.dir/vmgrid.c.o CMakeFiles/apbs_mg.dir/vopot.c.o CMakeFiles/apbs_mg.dir/vpmg.c.o CMakeFiles/apbs_mg.dir/vpmgp.c.o -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so /usr/lib/aarch64-linux-gnu/libblas.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp ../generic/libapbs_generic.so.3 ../pmgc/libapbs_pmgc.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 87%] Linking CXX shared library libgamer.so +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamer.dir/link.txt --verbose=1 cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/mg && /usr/bin/cmake -E cmake_symlink_library libapbs_mg.so.3 libapbs_mg.so.3 libapbs_mg.so +/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libgamer.so.1.9 -o libgamer.so.1.9.3 CMakeFiles/gamer.dir/base/gamer_base.c.o CMakeFiles/gamer.dir/triangle/triangle.c.o CMakeFiles/gamer.dir/tetgen/predicates.cpp.o CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o CMakeFiles/gamer.dir/biom/CorrectNormals.C.o CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o CMakeFiles/gamer.dir/biom/MarchingCube.C.o CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o CMakeFiles/gamer.dir/biom/PDB2Volume.C.o CMakeFiles/gamer.dir/biom/ReadLattice.C.o CMakeFiles/gamer.dir/biom/ReadPDB.C.o CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o CMakeFiles/gamer.dir/biom/RegionGrowing.C.o CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o CMakeFiles/gamer.dir/biom/SurfExtract.C.o CMakeFiles/gamer.dir/biom/SurfRefine.C.o CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -lmaloc make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' [ 87%] Built target apbs_mg make -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/depend @@ -3064,6 +3104,9 @@ make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' [ 87%] Building C object src/CMakeFiles/apbs_routines.dir/routines.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src && /usr/bin/cc -Dapbs_routines_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT src/CMakeFiles/apbs_routines.dir/routines.c.o -MF CMakeFiles/apbs_routines.dir/routines.c.o.d -o CMakeFiles/apbs_routines.dir/routines.c.o -c /build/apbs-3.4.1/src/routines.c +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cmake -E cmake_symlink_library libgamer.so.1.9.3 libgamer.so.1.9 libgamer.so +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 87%] Built target gamer /build/apbs-3.4.1/src/routines.c: In function 'initAPOL': /build/apbs-3.4.1/src/routines.c:5046:20: warning: 'Vparam_getAtomData' accessing 1024 bytes in a region of size 4 [-Wstringop-overflow=] 5046 | atomData = Vparam_getAtomData(param, "WAT", "OW"); @@ -3088,9 +3131,6 @@ /build/apbs-3.4.1/src/generic/vparam.h:304:27: note: in a call to function 'Vparam_getAtomData' 304 | VEXTERNC Vparam_AtomData* Vparam_getAtomData(Vparam *thee, | ^~~~~~~~~~~~~~~~~~ -[ 87%] Linking CXX shared library libgamer.so -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gamer.dir/link.txt --verbose=1 -/usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libgamer.so.1.9 -o libgamer.so.1.9.3 CMakeFiles/gamer.dir/base/gamer_base.c.o CMakeFiles/gamer.dir/triangle/triangle.c.o CMakeFiles/gamer.dir/tetgen/predicates.cpp.o CMakeFiles/gamer.dir/tetgen/tetgen.cpp.o CMakeFiles/gamer.dir/biom/CorrectNormals.C.o CMakeFiles/gamer.dir/biom/GenerateSphereMesh.C.o CMakeFiles/gamer.dir/biom/MarchingCube.C.o CMakeFiles/gamer.dir/biom/PDB2Mesh.C.o CMakeFiles/gamer.dir/biom/PDB2Volume.C.o CMakeFiles/gamer.dir/biom/ReadLattice.C.o CMakeFiles/gamer.dir/biom/ReadPDB.C.o CMakeFiles/gamer.dir/biom/ReadWriteMesh.C.o CMakeFiles/gamer.dir/biom/RegionGrowing.C.o CMakeFiles/gamer.dir/biom/SurfaceMesh.C.o CMakeFiles/gamer.dir/biom/SurfExtract.C.o CMakeFiles/gamer.dir/biom/SurfRefine.C.o CMakeFiles/gamer.dir/biom/SurfSmooth.C.o -lmaloc /build/apbs-3.4.1/src/routines.c: In function 'writematMG': /build/apbs-3.4.1/src/routines.c:2020:30: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2020 | sprintf(outpath, "%s.%s", writematstem, "mat"); @@ -3108,9 +3148,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/gamer/src && /usr/bin/cmake -E cmake_symlink_library libgamer.so.1.9.3 libgamer.so.1.9 libgamer.so -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 87%] Built target gamer /build/apbs-3.4.1/src/routines.c: In function 'writedataMG': /build/apbs-3.4.1/src/routines.c:2937:34: warning: '%s' directive writing 4 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2937 | sprintf(outpath, "%s.%s", writestem, "mcsf"); @@ -3285,12 +3322,12 @@ make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' [ 88%] Built target apbs_routines make -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/depend -make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/src /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/src /build/apbs-3.4.1/obj-aarch64-linux-gnu/src/CMakeFiles/apbs.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/depend +make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/DependInfo.cmake --color= -make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/depend make -f tools/mesh/CMakeFiles/dxmath.dir/build.make tools/mesh/CMakeFiles/dxmath.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/DependInfo.cmake --color= @@ -3303,51 +3340,51 @@ make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/DependInfo.cmake --color= make -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/depend +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/value.dir/DependInfo.cmake --color= make -f tools/mesh/CMakeFiles/multivalue.dir/build.make tools/mesh/CMakeFiles/multivalue.dir/depend -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake --color= -make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/build +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/build +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/build +make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/mesh/CMakeFiles/dxmath.dir/build.make tools/mesh/CMakeFiles/dxmath.dir/build -make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/build -[ 89%] Building C object tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 88%] Building C object src/CMakeFiles/apbs.dir/main.c.o make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/mesh/CMakeFiles/mergedx2.dir/build.make tools/mesh/CMakeFiles/mergedx2.dir/build -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o -MF CMakeFiles/mgmesh.dir/mgmesh.c.o.d -o CMakeFiles/mgmesh.dir/mgmesh.c.o -c /build/apbs-3.4.1/tools/mesh/mgmesh.c -make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 89%] Building C object tools/mesh/CMakeFiles/smooth.dir/smooth.c.o -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIE -fopenmp -MD -MT src/CMakeFiles/apbs.dir/main.c.o -MF CMakeFiles/apbs.dir/main.c.o.d -o CMakeFiles/apbs.dir/main.c.o -c /build/apbs-3.4.1/src/main.c make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 89%] Building C object tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o make -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/build -[ 89%] Building C object tools/mesh/CMakeFiles/dxmath.dir/dxmath.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/smooth.dir/smooth.c.o -MF CMakeFiles/smooth.dir/smooth.c.o.d -o CMakeFiles/smooth.dir/smooth.c.o -c /build/apbs-3.4.1/tools/mesh/smooth.c -[ 90%] Building C object tools/mesh/CMakeFiles/mergedx.dir/mergedx.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include 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-I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIE -fopenmp -MD -MT src/CMakeFiles/apbs.dir/main.c.o -MF CMakeFiles/apbs.dir/main.c.o.d -o CMakeFiles/apbs.dir/main.c.o -c /build/apbs-3.4.1/src/main.c cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/mergedx2.dir/mergedx2.c.o -MF CMakeFiles/mergedx2.dir/mergedx2.c.o.d -o CMakeFiles/mergedx2.dir/mergedx2.c.o -c /build/apbs-3.4.1/tools/mesh/mergedx2.c [ 91%] Building C object tools/mesh/CMakeFiles/value.dir/value.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/value.dir/value.c.o -MF CMakeFiles/value.dir/value.c.o.d -o CMakeFiles/value.dir/value.c.o -c /build/apbs-3.4.1/tools/mesh/value.c -[ 91%] Building C object tools/mesh/CMakeFiles/multivalue.dir/multivalue.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/multivalue.dir/multivalue.c.o -MF CMakeFiles/multivalue.dir/multivalue.c.o.d -o CMakeFiles/multivalue.dir/multivalue.c.o -c /build/apbs-3.4.1/tools/mesh/multivalue.c /build/apbs-3.4.1/src/main.c: In function 'main': /build/apbs-3.4.1/src/main.c:319:64: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 319 | Vnm_tprint( 1, "This executable compiled on %s at %s\n\n", __DATE__, __TIME__); @@ -3356,10 +3393,10 @@ 319 | Vnm_tprint( 1, "This executable compiled on %s at %s\n\n", __DATE__, __TIME__); | ^~~~~~~~ [ 91%] Linking C executable ../bin/mgmesh -[ 91%] Linking C executable ../bin/value cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mgmesh.dir/link.txt --verbose=1 -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/value.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mgmesh.dir/mgmesh.c.o -o ../bin/mgmesh ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 91%] Linking C executable ../bin/value +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/value.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/value.dir/value.c.o -o ../bin/value ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp [ 92%] Linking C executable ../bin/multivalue cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/multivalue.dir/link.txt --verbose=1 @@ -3369,155 +3406,118 @@ /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/smooth.dir/smooth.c.o -o ../bin/smooth ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp [ 92%] Linking C executable ../bin/dxmath cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dxmath.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dxmath.dir/dxmath.c.o -o ../bin/dxmath ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dxmath.dir/dxmath.c.o -o ../bin/dxmath ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp [ 92%] Built target value -[ 92%] Built target mgmesh make -f tools/mesh/CMakeFiles/benchmark.dir/build.make tools/mesh/CMakeFiles/benchmark.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/DependInfo.cmake --color= -make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/depend -make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/mesh/CMakeFiles/benchmark.dir/build.make tools/mesh/CMakeFiles/benchmark.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/build +[ 92%] Built target mgmesh +make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh 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-I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/benchmark.dir/benchmark.c.o -MF CMakeFiles/benchmark.dir/benchmark.c.o.d -o CMakeFiles/benchmark.dir/benchmark.c.o -c 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-I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/similarity.dir/similarity.c.o -MF CMakeFiles/similarity.dir/similarity.c.o.d -o CMakeFiles/similarity.dir/similarity.c.o -c /build/apbs-3.4.1/tools/mesh/similarity.c make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/build +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 92%] Building C object tools/mesh/CMakeFiles/similarity.dir/similarity.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/similarity.dir/similarity.c.o -MF CMakeFiles/similarity.dir/similarity.c.o.d -o CMakeFiles/similarity.dir/similarity.c.o -c /build/apbs-3.4.1/tools/mesh/similarity.c [ 92%] Built target multivalue make -f tools/mesh/CMakeFiles/analysis.dir/build.make tools/mesh/CMakeFiles/analysis.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/mesh/CMakeFiles/analysis.dir/build.make tools/mesh/CMakeFiles/analysis.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 92%] Building C object tools/mesh/CMakeFiles/analysis.dir/analysis.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/analysis.dir/analysis.c.o -MF CMakeFiles/analysis.dir/analysis.c.o.d -o CMakeFiles/analysis.dir/analysis.c.o -c /build/apbs-3.4.1/tools/mesh/analysis.c +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' [ 92%] Built target smooth -[ 92%] Linking C executable apbs make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/depend -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs.dir/link.txt --verbose=1 make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake --color= -[ 92%] Building C object tools/mesh/CMakeFiles/analysis.dir/analysis.c.o -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/apbs.dir/main.c.o -o apbs -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so 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/usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/analysis.dir/analysis.c.o -MF CMakeFiles/analysis.dir/analysis.c.o.d -o CMakeFiles/analysis.dir/analysis.c.o -c /build/apbs-3.4.1/tools/mesh/analysis.c +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 92%] Building C object tools/mesh/CMakeFiles/dx2mol.dir/dx2mol.c.o +[ 92%] Linking C executable apbs [ 92%] Built target dxmath make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/depend -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/dx2mol.dir/dx2mol.c.o -MF CMakeFiles/dx2mol.dir/dx2mol.c.o.d -o CMakeFiles/dx2mol.dir/dx2mol.c.o -c /build/apbs-3.4.1/tools/mesh/dx2mol.c +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs.dir/link.txt --verbose=1 make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake --color= -[ 92%] Linking C executable ../bin/mergedx +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/apbs.dir/main.c.o -o apbs -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so /usr/lib/aarch64-linux-gnu/libblas.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp libapbs_routines.so.3 mg/libapbs_mg.so.3 pmgc/libapbs_pmgc.so.3 fem/libapbs_fem.so.3 generic/libapbs_generic.so.3 ../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 92%] Building C object tools/mesh/CMakeFiles/dx2mol.dir/dx2mol.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/dx2mol.dir/dx2mol.c.o -MF CMakeFiles/dx2mol.dir/dx2mol.c.o.d -o CMakeFiles/dx2mol.dir/dx2mol.c.o -c /build/apbs-3.4.1/tools/mesh/dx2mol.c make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/build -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx.dir/link.txt --verbose=1 make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 92%] Linking C executable ../bin/mergedx +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx.dir/link.txt --verbose=1 [ 92%] Building C object tools/mesh/CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mergedx.dir/mergedx.c.o -o ../bin/mergedx ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -MF CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o.d -o CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -c /build/apbs-3.4.1/tools/mesh/dx2uhbd.c -[ 92%] Linking C executable ../bin/mergedx2 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mergedx.dir/mergedx.c.o -o ../bin/mergedx ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 93%] Linking C executable ../bin/benchmark +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmark.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/benchmark.dir/benchmark.c.o -o ../bin/benchmark ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 93%] Linking C executable ../bin/mergedx2 cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx2.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mergedx2.dir/mergedx2.c.o -o ../bin/mergedx2 ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 92%] Built target apbs +[ 94%] Linking C executable ../bin/dx2uhbd +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2uhbd.dir/link.txt --verbose=1 +[ 94%] Built target apbs make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -o ../bin/dx2uhbd ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 93%] Linking C executable ../bin/benchmark make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/build -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmark.dir/link.txt --verbose=1 make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/benchmark.dir/benchmark.c.o -o ../bin/benchmark ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 93%] Linking C executable ../bin/dx2mol -[ 93%] Building C object tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o +[ 94%] Linking C executable ../bin/dx2mol cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2mol.dir/link.txt --verbose=1 -[ 94%] Linking C executable ../bin/dx2uhbd -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2uhbd.dir/link.txt --verbose=1 -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o -MF CMakeFiles/del2dx.dir/del2dx.c.o.d -o CMakeFiles/del2dx.dir/del2dx.c.o -c /build/apbs-3.4.1/tools/mesh/del2dx.c -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -o ../bin/dx2uhbd ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp [ 94%] Built target mergedx make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/depend make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/DependInfo.cmake --color= +[ 94%] Building C object tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o -MF CMakeFiles/del2dx.dir/del2dx.c.o.d -o CMakeFiles/del2dx.dir/del2dx.c.o -c /build/apbs-3.4.1/tools/mesh/del2dx.c /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dx2mol.dir/dx2mol.c.o -o ../bin/dx2mol ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 95%] Linking C executable ../bin/analysis make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/build +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysis.dir/link.txt --verbose=1 make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 95%] Building C object tools/mesh/CMakeFiles/tensor2dx.dir/tensor2dx.c.o -make[3]: Leaving directory 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96%] Built target mergedx2 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/analysis.dir/analysis.c.o -o ../bin/analysis ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so 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-I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -MF CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o.d -o CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -c /build/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -/build/apbs-3.4.1/tools/mesh/del2dx.c: In function 'main': -/build/apbs-3.4.1/tools/mesh/del2dx.c:76:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 76 | fread(&igrid, 1, sizeof(int), pfile); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/tools/mesh/del2dx.c:89:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 89 | fread(buffer, 1, sizeof(char) * 10, pfile); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/tools/mesh/del2dx.c:97:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 97 | fread(data, tot_grid, sizeof(float), pfile); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/tools/mesh/del2dx.c:103:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 103 | fread(&scale, 1, sizeof(float), pfile); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/apbs-3.4.1/tools/mesh/del2dx.c:106:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 106 | fread(oldmid, 3, sizeof(float), pfile); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 96%] Built target benchmark -[ 97%] Linking C executable ../bin/similarity -[ 97%] Built target dx2uhbd +make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend +[ 96%] Built target mergedx2 +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/mesh /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh 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Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/manip /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip/CMakeFiles/born.dir/DependInfo.cmake --color= -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/similarity.dir/similarity.c.o -o ../bin/similarity ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/build +make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' make -f tools/manip/CMakeFiles/coulomb.dir/build.make tools/manip/CMakeFiles/coulomb.dir/build make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 97%] Building C object tools/manip/CMakeFiles/born.dir/born.c.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/manip/CMakeFiles/born.dir/born.c.o -MF CMakeFiles/born.dir/born.c.o.d -o CMakeFiles/born.dir/born.c.o -c 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-I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/mesh/CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -MF CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o.d -o CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -c /build/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c +[ 97%] Building C object tools/manip/CMakeFiles/coulomb.dir/coulomb.c.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip && /usr/bin/cc -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fopenmp -MD -MT tools/manip/CMakeFiles/coulomb.dir/coulomb.c.o -MF CMakeFiles/coulomb.dir/coulomb.c.o.d -o CMakeFiles/coulomb.dir/coulomb.c.o -c /build/apbs-3.4.1/tools/manip/coulomb.c -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/build /build/apbs-3.4.1/tools/mesh/tensor2dx.c: In function 'main': /build/apbs-3.4.1/tools/mesh/tensor2dx.c:97:9: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(pfile1,"%lf %lf %lf",&origin_xyz[0],&origin_xyz[1],&origin_xyz[2]); @@ -3549,11 +3549,62 @@ /build/apbs-3.4.1/tools/mesh/tensor2dx.c:158:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 158 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&tmp[1],&datapt[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/tools/mesh/del2dx.c: In function 'main': +/build/apbs-3.4.1/tools/mesh/del2dx.c:76:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 76 | fread(&igrid, 1, sizeof(int), pfile); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/tools/mesh/del2dx.c:89:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 89 | fread(buffer, 1, sizeof(char) * 10, pfile); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/tools/mesh/del2dx.c:97:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 97 | fread(data, tot_grid, sizeof(float), pfile); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/tools/mesh/del2dx.c:103:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 103 | fread(&scale, 1, sizeof(float), pfile); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/apbs-3.4.1/tools/mesh/del2dx.c:106:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 106 | fread(oldmid, 3, sizeof(float), pfile); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 98%] Linking C executable ../bin/similarity +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 +[ 98%] Built target dx2mol +make -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/depend +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/manip /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip/CMakeFiles/born.dir/DependInfo.cmake --color= +[ 98%] Built target dx2uhbd +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/depend +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/python /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/DependInfo.cmake --color= +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/similarity.dir/similarity.c.o -o ../bin/similarity ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 98%] Built target analysis +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/build +make -f tools/python-pybind/CMakeFiles/apbs_pybind.dir/build.make tools/python-pybind/CMakeFiles/apbs_pybind.dir/depend +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/python-pybind /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind/CMakeFiles/apbs_pybind.dir/DependInfo.cmake --color= 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/build/apbs-3.4.1/tools/manip/born.c +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +make -f tools/python-pybind/CMakeFiles/apbs_pybind.dir/build.make tools/python-pybind/CMakeFiles/apbs_pybind.dir/build +make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[ 98%] Linking C executable ../bin/tensor2dx +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/tensor2dx.dir/link.txt --verbose=1 +[ 98%] Building C object tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python && /usr/bin/cc -D_apbslib_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/python3.11 -I/build/apbs-3.4.1/tools/python -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -MF CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o.d -o CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -c /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/tensor2dx.dir/tensor2dx.c.o -o ../bin/tensor2dx ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 98%] Building CXX object tools/python-pybind/CMakeFiles/apbs_pybind.dir/module.cpp.o +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind && /usr/bin/c++ -Dapbs_pybind_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -isystem /usr/include/python3.11 -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpedantic -fpermissive -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -std=gnu++17 -MD -MT tools/python-pybind/CMakeFiles/apbs_pybind.dir/module.cpp.o -MF CMakeFiles/apbs_pybind.dir/module.cpp.o.d -o CMakeFiles/apbs_pybind.dir/module.cpp.o -c /build/apbs-3.4.1/tools/python-pybind/module.cpp /build/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c: In function 'main': /build/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:30:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] 30 | scanf("%s", flnm); | ^~~~~~~~~~~~~~~~~ -[ 98%] Built target analysis /build/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:42:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] 42 | scanf("%s", newfile); | ^~~~~~~~~~~~~~~~~~~~ @@ -3638,50 +3689,36 @@ /build/apbs-3.4.1/tools/mesh/uhbd_asc2bin.c:138:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 138 | fscanf(inFile, "%lf", RAT3(grid, i, j, k)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f tools/python-pybind/CMakeFiles/apbs_pybind.dir/build.make tools/python-pybind/CMakeFiles/apbs_pybind.dir/depend -make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/apbs-3.4.1 /build/apbs-3.4.1/tools/python-pybind /build/apbs-3.4.1/obj-aarch64-linux-gnu /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind/CMakeFiles/apbs_pybind.dir/DependInfo.cmake --color= [ 99%] Linking C executable ../bin/del2dx cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/del2dx.dir/link.txt --verbose=1 -[ 99%] Building C object tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/del2dx.dir/del2dx.c.o -o ../bin/del2dx ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python && /usr/bin/cc -D_apbslib_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/python3.11 -I/build/apbs-3.4.1/tools/python -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -MD -MT tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -MF CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o.d -o CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -c /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -make -f tools/python-pybind/CMakeFiles/apbs_pybind.dir/build.make tools/python-pybind/CMakeFiles/apbs_pybind.dir/build -make[3]: Entering directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 99%] Building CXX object tools/python-pybind/CMakeFiles/apbs_pybind.dir/module.cpp.o -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind && /usr/bin/c++ -Dapbs_pybind_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -isystem /usr/include/python3.11 -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpedantic -fpermissive -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -std=gnu++17 -MD -MT tools/python-pybind/CMakeFiles/apbs_pybind.dir/module.cpp.o -MF CMakeFiles/apbs_pybind.dir/module.cpp.o.d -o CMakeFiles/apbs_pybind.dir/module.cpp.o -c /build/apbs-3.4.1/tools/python-pybind/module.cpp -[ 99%] Linking C executable ../bin/tensor2dx -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/tensor2dx.dir/link.txt --verbose=1 [ 99%] Linking C executable ../bin/uhbd_asc2bin cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/uhbd_asc2bin.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/tensor2dx.dir/tensor2dx.c.o -o ../bin/tensor2dx ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +[ 99%] Linking C executable ../bin/coulomb +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/coulomb.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -o ../bin/uhbd_asc2bin ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/coulomb.dir/coulomb.c.o -o ../bin/coulomb ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' [ 99%] Built target similarity [ 99%] Building CXX object tools/python-pybind/CMakeFiles/apbs_pybind.dir/bind_nosh.cpp.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind && /usr/bin/c++ -Dapbs_pybind_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -isystem /usr/include/python3.11 -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpedantic -fpermissive -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -std=gnu++17 -MD -MT tools/python-pybind/CMakeFiles/apbs_pybind.dir/bind_nosh.cpp.o -MF CMakeFiles/apbs_pybind.dir/bind_nosh.cpp.o.d -o CMakeFiles/apbs_pybind.dir/bind_nosh.cpp.o -c /build/apbs-3.4.1/tools/python-pybind/bind_nosh.cpp make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[ 99%] Built target del2dx +[ 99%] Built target tensor2dx [100%] Building CXX object tools/python-pybind/CMakeFiles/apbs_pybind.dir/bind_vatom.cpp.o -[100%] Linking C executable ../bin/born cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind && /usr/bin/c++ -Dapbs_pybind_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -isystem /usr/include/python3.11 -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpedantic -fpermissive -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -std=gnu++17 -MD -MT tools/python-pybind/CMakeFiles/apbs_pybind.dir/bind_vatom.cpp.o -MF CMakeFiles/apbs_pybind.dir/bind_vatom.cpp.o.d -o CMakeFiles/apbs_pybind.dir/bind_vatom.cpp.o -c /build/apbs-3.4.1/tools/python-pybind/bind_vatom.cpp -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/born.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/born.dir/born.c.o -o ../bin/born ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp -[100%] Linking C executable ../bin/coulomb -cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/coulomb.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/coulomb.dir/coulomb.c.o -o ../bin/coulomb ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp -make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[100%] Built target uhbd_asc2bin make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[100%] Built target del2dx [100%] Building CXX object tools/python-pybind/CMakeFiles/apbs_pybind.dir/bind_valist.cpp.o cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python-pybind && /usr/bin/c++ -Dapbs_pybind_EXPORTS -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -I/build/apbs-3.4.1/src -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/src -I/build/apbs-3.4.1/include -I/usr/include/suitesparse -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/mc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/base -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/bam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/whb -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/aprx -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/gem -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/pde -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/nam -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/dyn -I/build/apbs-3.4.1/debian/external_deps/fetk/mc/src/mcsh -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/vf2c/punc -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/cgcode -I/usr/include/superlu -I/build/apbs-3.4.1/obj-aarch64-linux-gnu/_deps/fetk-build/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src -I/build/apbs-3.4.1/debian/external_deps/fetk/punc/src/base -isystem /usr/include/python3.11 -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wpedantic -fpermissive -fPIC -O2 -g -DNDEBUG -fPIC -fopenmp -std=gnu++17 -MD -MT tools/python-pybind/CMakeFiles/apbs_pybind.dir/bind_valist.cpp.o -MF CMakeFiles/apbs_pybind.dir/bind_valist.cpp.o.d -o CMakeFiles/apbs_pybind.dir/bind_valist.cpp.o -c /build/apbs-3.4.1/tools/python-pybind/bind_valist.cpp -[100%] Built target tensor2dx make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' -[100%] Built target born +[100%] Linking C executable ../bin/born +cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/born.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[100%] Built target uhbd_asc2bin +/usr/bin/cc -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/born.dir/born.c.o -o ../bin/born ../../src/libapbs_routines.so.3 ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp [100%] Built target coulomb +make[3]: Leaving directory '/build/apbs-3.4.1/obj-aarch64-linux-gnu' +[100%] Built target born [100%] Linking C shared library _apbslib.so cd /build/apbs-3.4.1/obj-aarch64-linux-gnu/tools/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/_apbslib.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/apbs-3.4.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/tirpc -fPIC -O2 -g -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,_apbslib.so -o _apbslib.so CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so /usr/lib/aarch64-linux-gnu/libblas.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp ../../src/libapbs_routines.so.3 /usr/lib/aarch64-linux-gnu/libpython3.11.so ../../src/mg/libapbs_mg.so.3 ../../src/pmgc/libapbs_pmgc.so.3 ../../src/fem/libapbs_fem.so.3 ../../src/generic/libapbs_generic.so.3 ../../_deps/fetk-build/mc/src/libmc.so.1.9.3 ../../_deps/fetk-build/punc/src/libpunc.so.1.9.3 -lmaloc /usr/lib/aarch64-linux-gnu/libarpack.so /usr/lib/aarch64-linux-gnu/libsuperlu.so ../../_deps/fetk-build/punc/src/vf2c/libvf2c.so.1.9.3 ../../_deps/fetk-build/punc/src/cgcode/libcgcode.so.1.9.3 -lutil -ldl -lm -lstdc++ /usr/lib/aarch64-linux-gnu/libumfpack.so /usr/lib/aarch64-linux-gnu/libspqr.so /usr/lib/aarch64-linux-gnu/libcholmod.so /usr/lib/aarch64-linux-gnu/libccolamd.so /usr/lib/aarch64-linux-gnu/libcamd.so /usr/lib/aarch64-linux-gnu/libcolamd.so /usr/lib/aarch64-linux-gnu/libamd.so -lm -ldl /usr/lib/aarch64-linux-gnu/libblas.so /usr/lib/aarch64-linux-gnu/libsuitesparseconfig.so /usr/lib/aarch64-linux-gnu/librt.a /usr/lib/aarch64-linux-gnu/openmpi/lib/libmpi.so -fopenmp @@ -3702,45 +3739,45 @@ making output directory... done WARNING: html_static_path entry '_static' does not exist [autosummary] generating autosummary for: api/index.rst, background.rst, formats/apbs-xml-parm.rst, formats/flat-parm.rst, formats/harwell.rst, formats/index.rst, formats/mcsf.rst, formats/opendx.rst, formats/pdb.rst, formats/pqr.rst, ..., using/input/old/generic/sdens.rst, using/input/old/generic/srad.rst, using/input/old/generic/swin.rst, using/input/old/generic/temp.rst, using/input/old/index.rst, using/input/old/print.rst, using/input/old/read.rst, using/tests.rst, using/tools.rst, using/units.rst -Failed to import apbs.input_file.read. -Possible hints: -* ModuleNotFoundError: No module named 'pyparsing' -* AttributeError: module 'apbs' has no attribute 'input_file' Failed to import apbs.input_file.calculate.boundary_element. Possible hints: -* ModuleNotFoundError: No module named 'pyparsing' * AttributeError: module 'apbs' has no attribute 'input_file' -Failed to import apbs.input_file.calculate.nonpolar.Nonpolar. -Possible hints: * ModuleNotFoundError: No module named 'pyparsing' -* AttributeError: module 'apbs' has no attribute 'input_file' Failed to import apbs.input_file. Possible hints: -* ModuleNotFoundError: No module named 'pyparsing' * AttributeError: module 'apbs' has no attribute 'input_file' +* ModuleNotFoundError: No module named 'pyparsing' Failed to import apbs.input_file.process. Possible hints: +* AttributeError: module 'apbs' has no attribute 'input_file' * ModuleNotFoundError: No module named 'pyparsing' +Failed to import apbs.input_file.calculate.nonpolar.Nonpolar. +Possible hints: * AttributeError: module 'apbs' has no attribute 'input_file' -Failed to import apbs.input_file.calculate. +* ModuleNotFoundError: No module named 'pyparsing' +Failed to import apbs.input_file.read. Possible hints: +* AttributeError: module 'apbs' has no attribute 'input_file' * ModuleNotFoundError: No module named 'pyparsing' +Failed to import apbs.input_file.calculate. +Possible hints: * AttributeError: module 'apbs' has no attribute 'input_file' +* ModuleNotFoundError: No module named 'pyparsing' Failed to import apbs.input_file.calculate.generic. Possible hints: -* ModuleNotFoundError: No module named 'pyparsing' * AttributeError: module 'apbs' has no attribute 'input_file' +* ModuleNotFoundError: No module named 'pyparsing' Failed to import apbs.input_file.calculate.finite_difference. Possible hints: -* ModuleNotFoundError: No module named 'pyparsing' * AttributeError: module 'apbs' has no attribute 'input_file' +* ModuleNotFoundError: No module named 'pyparsing' Failed to import apbs.input_file.calculate.finite_element. Possible hints: -* ModuleNotFoundError: No module named 'pyparsing' * AttributeError: module 'apbs' has no attribute 'input_file' +* ModuleNotFoundError: No module named 'pyparsing' loading intersphinx inventory from https://docs.python.org/3/objects.inv... WARNING: failed to reach any of the inventories with the following issues: -intersphinx inventory 'https://docs.python.org/3/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.python.org', port=443): Max retries exceeded with url: /3/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) +intersphinx inventory 'https://docs.python.org/3/objects.inv' not fetchable due to : HTTPSConnectionPool(host='docs.python.org', port=443): Max retries exceeded with url: /3/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) building [mo]: targets for 0 po files that are out of date building [html]: targets for 127 source files that are out of date updating environment: [new config] 127 added, 0 changed, 0 removed @@ -4604,17 +4641,17 @@ -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/README.md -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/CMakeLists.txt -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin --- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/coulomb -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/born +-- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/coulomb -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/uhbd_asc2bin --- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/tensor2dx -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/del2dx +-- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/tensor2dx -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/similarity -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/analysis -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/dx2mol -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/dx2uhbd --- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/benchmark -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/mergedx2 +-- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/benchmark -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/mergedx -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/dxmath -- Installing: /build/apbs-3.4.1/debian/tmp/usr/share/apbs/tools/bin/smooth @@ -4630,7 +4667,7 @@ -------------------------------------------------------------------------------- Testing forces from apbs-forces.in -Checking forces for input file apbs-forces.inChecking Polar ForcesChecking Apolar ForcesElapsed time: 0.004454 seconds +Checking forces for input file apbs-forces.inChecking Polar ForcesChecking Apolar ForcesElapsed time: 0.004373 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-mol-auto.in @@ -4908,7 +4945,7 @@ *** PASSED *** Testing computed result against expected result (-2.297735526282e+02, -2.297735411962e+02) *** PASSED *** -Elapsed time: 14.678589 seconds +Elapsed time: 16.333126 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-auto.in @@ -5190,7 +5227,7 @@ *** PASSED *** Testing computed result against expected result (-2.290124252387e+02, -2.290124171992e+02) *** PASSED *** -Elapsed time: 12.406689 seconds +Elapsed time: 12.571019 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-mol-parallel.in @@ -6334,7 +6371,7 @@ *** PASSED *** Testing computed result against expected result (-2.304918486746e+02, -2.304918086635e+02) *** PASSED *** -Elapsed time: 63.705548 seconds +Elapsed time: 65.84394 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-parallel.in @@ -7478,9 +7515,9 @@ *** PASSED *** Testing computed result against expected result (-2.293871439560e+02, -2.293871354771e+02) *** PASSED *** -Elapsed time: 63.087297 seconds +Elapsed time: 68.485394 seconds -------------------------------------------------------------------------------- -Total elapsed time: 153.882577 seconds +Total elapsed time: 163.237852 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -7783,7 +7820,7 @@ *** PASSED *** Testing computed result against expected result (1.048683058621e+02, 1.048683060915e+02) *** PASSED *** -Elapsed time: 536.963669 seconds +Elapsed time: 511.423484 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-auto.in @@ -8084,9 +8121,9 @@ *** PASSED *** Testing computed result against expected result (1.095841077688e+02, 1.095841074454e+02) *** PASSED *** -Elapsed time: 368.255996 seconds +Elapsed time: 389.191313 seconds -------------------------------------------------------------------------------- -Total elapsed time: 905.219665 seconds +Total elapsed time: 900.614797 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -9003,9 +9040,9 @@ *** PASSED *** Testing computed result against expected result (1.192358496286e+01, 1.192358496286e+01) *** PASSED *** -Elapsed time: 45.196099 seconds +Elapsed time: 45.204524 seconds -------------------------------------------------------------------------------- -Total elapsed time: 45.196099 seconds +Total elapsed time: 45.204524 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -9512,7 +9549,7 @@ *** PASSED *** Testing computed result against expected result (1.500810086373e+01, 1.500810086371e+01) *** PASSED *** -Elapsed time: 65.48821 seconds +Elapsed time: 62.994971 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file 1d7h-dmso-smol.in @@ -10022,7 +10059,7 @@ *** PASSED *** Testing computed result against expected result (1.624454192074e+01, 1.624454192072e+01) *** PASSED *** -Elapsed time: 54.329274 seconds +Elapsed time: 52.434554 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file 1d7i-dss-mol.in @@ -10532,7 +10569,7 @@ *** PASSED *** Testing computed result against expected result (1.442499933664e+01, 1.442500529301e+01) *** PASSED *** -Elapsed time: 63.784311 seconds +Elapsed time: 63.387122 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file 1d7i-dss-smol.in @@ -11042,9 +11079,9 @@ *** PASSED *** Testing computed result against expected result (1.545150742843e+01, 1.545150009785e+01) *** PASSED *** -Elapsed time: 51.935225 seconds +Elapsed time: 55.997732 seconds -------------------------------------------------------------------------------- -Total elapsed time: 235.53702 seconds +Total elapsed time: 234.814379 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -11460,7 +11497,7 @@ *** PASSED *** Testing computed result against expected result (-5.246475812684e+01, -5.246475812665e+01) *** PASSED *** -Elapsed time: 63.428965 seconds +Elapsed time: 61.306001 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol.in @@ -11868,9 +11905,9 @@ *** PASSED *** Testing computed result against expected result (-5.405979017059e+01, -5.405977880082e+01) *** PASSED *** -Elapsed time: 50.083528 seconds +Elapsed time: 47.286402 seconds -------------------------------------------------------------------------------- -Total elapsed time: 113.512493 seconds +Total elapsed time: 108.592403 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -12372,7 +12409,7 @@ *** PASSED *** Testing computed result against expected result (-4.745272838398e+02, -4.745272868358e+02) *** PASSED *** -Elapsed time: 34.763714 seconds +Elapsed time: 36.283984 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol.in @@ -12878,9 +12915,9 @@ *** PASSED *** Testing computed result against expected result (-4.721246714828e+02, -4.721247084138e+02) *** PASSED *** -Elapsed time: 28.238283 seconds +Elapsed time: 28.262008 seconds -------------------------------------------------------------------------------- -Total elapsed time: 63.001997 seconds +Total elapsed time: 64.545992 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -13183,9 +13220,9 @@ *** PASSED *** Testing computed result against expected result (-1.125191605614e+03, -1.125192402906e+03) *** PASSED *** -Elapsed time: 30.514371 seconds +Elapsed time: 31.005433 seconds -------------------------------------------------------------------------------- -Total elapsed time: 30.514371 seconds +Total elapsed time: 31.005433 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -13495,7 +13532,7 @@ *** PASSED *** Testing computed result against expected result (8.083515648803e+00, 8.083515648730e+00) *** PASSED *** -Elapsed time: 87.791857 seconds +Elapsed time: 93.940642 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-vdw.in @@ -13806,7 +13843,7 @@ *** PASSED *** Testing computed result against expected result (2.096300255720e+01, 2.096296139195e+01) *** PASSED *** -Elapsed time: 60.426063 seconds +Elapsed time: 67.266331 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-mol-surf.in @@ -14117,7 +14154,7 @@ *** PASSED *** Testing computed result against expected result (1.192607686582e+02, 1.192608095265e+02) *** PASSED *** -Elapsed time: 64.631278 seconds +Elapsed time: 76.331912 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-surf.in @@ -14428,9 +14465,9 @@ *** PASSED *** Testing computed result against expected result (1.088773280806e+02, 1.088773280806e+02) *** PASSED *** -Elapsed time: 54.551911 seconds +Elapsed time: 62.802978 seconds -------------------------------------------------------------------------------- -Total elapsed time: 267.401109 seconds +Total elapsed time: 300.341863 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -14668,7 +14705,7 @@ *** PASSED *** Testing computed result against expected result (1.830820799027e+01, 1.830820799027e+01) *** PASSED *** -Elapsed time: 6.925186 seconds +Elapsed time: 7.21277 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file complex-0_2.in @@ -14910,7 +14947,7 @@ *** PASSED *** Testing computed result against expected result (8.906694086751e+00, 8.906694086750e+00) *** PASSED *** -Elapsed time: 7.242716 seconds +Elapsed time: 6.977794 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file complex-0_3.in @@ -15152,7 +15189,7 @@ *** PASSED *** Testing computed result against expected result (5.909599816984e+00, 5.909599816984e+00) *** PASSED *** -Elapsed time: 6.699576 seconds +Elapsed time: 7.809032 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file complex-0_4.in @@ -15394,9 +15431,9 @@ *** PASSED *** Testing computed result against expected result (4.430144947418e+00, 4.430144947418e+00) *** PASSED *** -Elapsed time: 6.458477 seconds +Elapsed time: 7.77269 seconds -------------------------------------------------------------------------------- -Total elapsed time: 27.325955 seconds +Total elapsed time: 29.772286 seconds Test results have been logged -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- @@ -15655,7 +15692,7 @@ *** PASSED *** Testing computed result against expected result (-3.541635359318e+02, -3.541635359318e+02) *** PASSED *** -Elapsed time: 9.360711 seconds +Elapsed time: 12.335631 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol.in @@ -15906,9 +15943,9 @@ *** PASSED *** Testing computed result against expected result (-3.536629226599e+02, -3.536628818750e+02) *** PASSED *** -Elapsed time: 8.591544 seconds +Elapsed time: 11.284035 seconds -------------------------------------------------------------------------------- -Total elapsed time: 17.952255 seconds +Total elapsed time: 23.619666 seconds Test results have been logged -------------------------------------------------------------------------------- Checking for intermediate energies in input file apbs-smol.out @@ -15973,61 +16010,61 @@ dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake -dpkg-shlibdeps: warning: symbol saxpy_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol dnrm2_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol cosh used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol do_fio used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol sqrtf used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol scopy_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol sdot_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol e_wsfe used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol pow_ri used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol daxpy_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: symbol atan2 used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol sincos used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol erf used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol exp used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries dpkg-shlibdeps: warning: symbol acos used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol erfc used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries dpkg-shlibdeps: warning: symbol asin used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol sqrt used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol cosh used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol sinh used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol sincos used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol sin used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries dpkg-shlibdeps: warning: symbol log used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries -dpkg-shlibdeps: warning: symbol tan used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol tanh used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol atan used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libvf2c.so.1.9.3 found in none of the libraries dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libsuitesparseconfig.so.5 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libcgcode.so.1.9 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libapbs_pmgc.so.3 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libcolamd.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libstdc++.so.6 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libspqr.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libsuperlu.so.5 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libarpack.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libblas.so.3 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libpunc.so.1.9 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libapbs_fem.so.3 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libmc.so.1.9 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libmpi.so.40 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libccolamd.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libumfpack.so.5 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libcholmod.so.3 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libcamd.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libgomp.so.1 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libamd.so.2 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/tensor2dx were not linked against libvf2c.so.1.9 (they use none of the library's symbols) +dpkg-shlibdeps: warning: symbol log used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol pow_dd used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol dnrm2_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol ddot_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol scopy_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol sdot_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol snrm2_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol pow_ri used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol cosh used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: symbol dcopy_ used by debian/libfetk1.9/usr/lib/aarch64-linux-gnu/libcgcode.so.1.9.3 found in none of the libraries +dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libumfpack.so.5 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libarpack.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libccolamd.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libgomp.so.1 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libapbs_fem.so.3 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libpunc.so.1.9 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libapbs_pmgc.so.3 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libmpi.so.40 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libcgcode.so.1.9 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libcholmod.so.3 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libamd.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libsuperlu.so.5 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libcolamd.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libsuitesparseconfig.so.5 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libvf2c.so.1.9 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libcamd.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libstdc++.so.6 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libspqr.so.2 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libblas.so.3 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/born debian/apbs/usr/lib/apbs/tools/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/value debian/apbs/usr/lib/apbs/tools/bin/uhbd_asc2bin debian/apbs/usr/lib/apbs/tools/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/benchmark debian/apbs/usr/bin/apbs were not linked against libmc.so.1.9 (they use none of the library's symbols) dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: Depends field of package libapbs-dev: substitution variable ${shlibs:Depends} used, but is not defined -dpkg-gencontrol: warning: Depends field of package libfetk-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package apbs: substitution variable ${sphinxdoc:Depends} used, but is not defined +dpkg-gencontrol: warning: Depends field of package libfetk-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package apbs: substitution variable ${sphinxdoc:Depends} used, but is not defined dpkg-gencontrol: warning: package apbs-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake +dpkg-deb: building package 'libapbs3-dbgsym' in '../libapbs3-dbgsym_3.4.1-5_arm64.deb'. dpkg-deb: building package 'apbs' in '../apbs_3.4.1-5_arm64.deb'. dpkg-deb: building package 'libapbs-dev' in '../libapbs-dev_3.4.1-5_arm64.deb'. dpkg-deb: building package 'apbs-doc' in '../apbs-doc_3.4.1-5_all.deb'. -dpkg-deb: building package 'libapbs3-dbgsym' in '../libapbs3-dbgsym_3.4.1-5_arm64.deb'. dpkg-deb: building package 'libfetk1.9' in '../libfetk1.9_3.4.1-5_arm64.deb'. dpkg-deb: building package 'python3-apbslib' in '../python3-apbslib_3.4.1-5_arm64.deb'. dpkg-deb: building package 'apbs-dbgsym' in '../apbs-dbgsym_3.4.1-5_arm64.deb'. @@ -16043,12 +16080,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2894/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/17545 and its subdirectories -I: Current time: Sun Apr 16 07:12:24 -12 2023 -I: pbuilder-time-stamp: 1681672344 +I: removing directory /srv/workspace/pbuilder/2894 and its subdirectories +I: Current time: Sun May 19 16:15:21 +14 2024 +I: pbuilder-time-stamp: 1716084921