Diff of the two buildlogs: -- --- b1/build.log 2023-05-31 10:38:21.714010189 +0000 +++ b2/build.log 2023-05-31 10:44:52.252883690 +0000 @@ -1,8 +1,65 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue May 30 22:33:35 -12 2023 -I: pbuilder-time-stamp: 1685529215 +I: Current time: Wed Jul 3 07:01:28 +14 2024 +I: pbuilder-time-stamp: 1719939688 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] +tar: ./usr/share/perl5/Debian: time stamp 2025-08-05 10:27:37 is 34399565.7680732 s in the future +tar: ./usr/share/man/pt/man8: time stamp 2025-08-05 10:27:37 is 34399565.69229308 s in the future +tar: ./usr/share/man/pt/man5: time stamp 2025-08-05 10:27:37 is 34399565.6860744 s in the future +tar: ./usr/share/man/nl/man8: time stamp 2025-08-05 10:27:37 is 34399565.67453454 s in the future +tar: ./usr/share/man/nl/man5: time stamp 2025-08-05 10:27:37 is 34399565.6719379 s in the future +tar: ./usr/share/man/man5: time stamp 2025-08-05 10:27:37 is 34399565.6337978 s in the future +tar: ./usr/share/man/fr/man5: time stamp 2025-08-05 10:27:37 is 34399565.56990022 s in the future +tar: ./usr/share/man/de/man5: time stamp 2025-08-05 10:27:37 is 34399565.547579 s in the future +tar: ./usr/share/locale/zh_CN/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.35272082 s in the future +tar: ./usr/share/locale/vi/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.3207509 s in the future +tar: ./usr/share/locale/uk/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.26615902 s in the future +tar: ./usr/share/locale/sv/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.18398476 s in the future +tar: ./usr/share/locale/sk/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.15776358 s in the future +tar: ./usr/share/locale/ru/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.10670762 s in the future +tar: ./usr/share/locale/pt_BR/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.05598288 s in the future +tar: ./usr/share/locale/pt/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399565.02243308 s in the future +tar: ./usr/share/locale/pl/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.99686784 s in the future +tar: ./usr/share/locale/nl/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.96634084 s in the future +tar: ./usr/share/locale/nb/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.94272 s in the future +tar: ./usr/share/locale/ko/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.91297448 s in the future +tar: ./usr/share/locale/ja/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.8783306 s in the future +tar: ./usr/share/locale/it/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.85313448 s in the future +tar: ./usr/share/locale/hu/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.83610812 s in the future +tar: ./usr/share/locale/gl/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.82553868 s in the future +tar: ./usr/share/locale/fr/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.7721854 s in the future +tar: ./usr/share/locale/eu/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.7351773 s in the future +tar: ./usr/share/locale/es/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.69230472 s in the future +tar: ./usr/share/locale/de/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.64533068 s in the future +tar: ./usr/share/locale/da/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.61829988 s in the future +tar: ./usr/share/locale/cs/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.59087924 s in the future +tar: ./usr/share/locale/ca/LC_MESSAGES: time stamp 2025-08-05 10:27:37 is 34399564.5635037 s in the future +tar: ./usr/share/doc/adduser/examples/adduser.local.conf.examples/skel.other: time stamp 2025-08-05 10:27:37 is 34399564.4758367 s in the future +tar: ./usr/share/doc/adduser/examples/adduser.local.conf.examples/skel: time stamp 2025-08-05 10:27:37 is 34399564.47548492 s in the future +tar: ./usr/share/doc/adduser/examples/adduser.local.conf.examples: time stamp 2025-08-05 10:27:37 is 34399564.47543818 s in the future +tar: ./usr/share/doc/adduser/examples: time stamp 2025-08-05 10:27:37 is 34399564.47540708 s in the future +tar: ./usr/share/doc/adduser: time stamp 2025-08-05 10:27:37 is 34399564.47537842 s in the future +tar: ./var/log/dpkg.log: time stamp 2025-08-05 10:27:37 is 34399556.42048352 s in the future +tar: ./var/log/apt/eipp.log.xz: time stamp 2025-08-05 10:27:36 is 34399555.42025608 s in the future +tar: ./var/log/apt/history.log: time stamp 2025-08-05 10:27:37 is 34399556.42014108 s in the future +tar: ./var/log/apt/term.log: time stamp 2025-08-05 10:27:37 is 34399556.41992198 s in the future +tar: ./var/log/apt: time stamp 2025-08-05 10:27:36 is 34399555.4198028 s in the future +tar: ./var/cache/apt/archives/partial: time stamp 2025-08-05 10:27:36 is 34399555.39780584 s in the future +tar: ./var/cache/apt/archives: time stamp 2025-08-05 10:27:39 is 34399558.39770608 s in the future +tar: ./var/lib/dpkg/status: time stamp 2025-08-05 10:27:37 is 34399556.3931751 s in the future +tar: ./var/lib/dpkg/status-old: time stamp 2025-08-05 10:27:37 is 34399556.39094076 s in the future +tar: ./var/lib/dpkg/triggers/Lock: time stamp 2025-08-05 10:27:37 is 34399556.39041654 s in the future +tar: ./var/lib/dpkg/lock: time stamp 2025-08-05 10:27:37 is 34399556.39032464 s in the future +tar: ./var/lib/dpkg/updates: time stamp 2025-08-05 10:27:37 is 34399556.38822038 s in the future +tar: ./var/lib/dpkg/info/adduser.list: time stamp 2025-08-05 10:27:37 is 34399556.3868479 s in the future +tar: ./var/lib/dpkg/info: time stamp 2025-08-05 10:27:37 is 34399556.28272652 s in the future +tar: ./var/lib/dpkg: time stamp 2025-08-05 10:27:37 is 34399556.28173088 s in the future +tar: ./var/lib/apt/extended_states: time stamp 2025-08-05 10:27:37 is 34399556.2816064 s in the future +tar: ./var/lib/apt: time stamp 2025-08-05 10:27:37 is 34399555.60680306 s in the future +tar: ./usr/share/man/de/man8: time stamp 2025-08-05 10:27:37 is 34399555.42663352 s in the future +tar: ./usr/share/man/fr/man8: time stamp 2025-08-05 10:27:37 is 34399555.4264547 s in the future +tar: ./usr/share/man/man8: time stamp 2025-08-05 10:27:37 is 34399555.42627974 s in the future +tar: ./usr/sbin: time stamp 2025-08-05 10:27:37 is 34399555.42561064 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem @@ -16,7 +73,7 @@ I: copying [./python-bx_0.9.0.orig.tar.gz] I: copying [./python-bx_0.9.0-1.debian.tar.xz] I: Extracting source -gpgv: Signature made Fri Oct 14 09:00:21 2022 -12 +gpgv: Signature made Sat Oct 15 11:00:21 2022 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -29,52 +86,84 @@ dpkg-source: info: applying fix_BIN_OFFSETS_MAX I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3981/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D01_modify_environment starting +debug: Running on codethink11-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jul 3 07:01 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 ' - DISTRIBUTION='bookworm' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3981' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=23433 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iSkznMbq/pbuilderrc_7kkJ --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iSkznMbq/b1 --logfile b1/build.log python-bx_0.9.0-1.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iSkznMbq/pbuilderrc_SLFG --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iSkznMbq/b2 --logfile b2/build.log --extrapackages usrmerge python-bx_0.9.0-1.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink14-arm64 4.15.0-211-generic #222-Ubuntu SMP Tue Apr 18 18:58:27 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-211-generic #222-Ubuntu SMP Tue Apr 18 18:58:27 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 24 22:26 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3981/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Jun 24 06:48 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -204,7 +293,7 @@ Get: 73 http://deb.debian.org/debian bookworm/main arm64 python3-pytest-cython all 0.1.1-1 [8068 B] Get: 74 http://deb.debian.org/debian bookworm/main arm64 python3-setuptools all 66.1.1-1 [521 kB] Get: 75 http://deb.debian.org/debian bookworm/main arm64 python3-six all 1.16.0-4 [17.5 kB] -Fetched 42.0 MB in 4s (10.0 MB/s) +Fetched 42.0 MB in 4s (9355 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19611 files and directories currently installed.) @@ -522,8 +611,17 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/python-bx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-bx_0.9.0-1_source.changes +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/python-bx-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-bx_0.9.0-1_source.changes dpkg-buildpackage: info: source package python-bx dpkg-buildpackage: info: source version 0.9.0-1 dpkg-buildpackage: info: source distribution unstable @@ -533,7 +631,7 @@ debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean -make[1]: Entering directory '/build/python-bx-0.9.0' +make[1]: Map '/build/python-bx-0.9.0' wordt binnengegaan dh_auto_clean I: pybuild base:240: python3.11 setup.py clean running clean @@ -543,7 +641,7 @@ find -name "*.pyx" | sed 's/pyx$/c/' | xargs rm -f grep -rli "Generated by Cython" lib/ | xargs -r rm rm -rf lib/bx_python.egg-info -make[1]: Leaving directory '/build/python-bx-0.9.0' +make[1]: Map '/build/python-bx-0.9.0' wordt verlaten dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary @@ -1264,7 +1362,7 @@ assert allclose(sd.sum_data / sd.valid_count, values) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html -======================= 139 passed, 6 warnings in 15.50s ======================= +======================= 139 passed, 6 warnings in 22.44s ======================= create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -1995,7 +2093,7 @@ dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 -make[1]: Entering directory '/build/python-bx-0.9.0' +make[1]: Map '/build/python-bx-0.9.0' wordt binnengegaan dh_python3 --shebang=/usr/bin/python3 I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/wiggle_to_simple.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/wiggle_to_chr_binned_array.py @@ -2091,7 +2189,7 @@ I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/align_print_template.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/aggregate_scores_in_intervals.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/gene_fourfold_sites.py -make[1]: Leaving directory '/build/python-bx-0.9.0' +make[1]: Map '/build/python-bx-0.9.0' wordt verlaten dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild @@ -2108,8 +2206,8 @@ dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'python3-bx-dbgsym' in '../python3-bx-dbgsym_0.9.0-1_arm64.deb'. -dpkg-deb: building package 'python3-bx' in '../python3-bx_0.9.0-1_arm64.deb'. +dpkg-deb: pakket 'python3-bx-dbgsym' wordt gebouwd in '../python3-bx-dbgsym_0.9.0-1_arm64.deb'. +dpkg-deb: pakket 'python3-bx' wordt gebouwd in '../python3-bx_0.9.0-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../python-bx_0.9.0-1_arm64.buildinfo dpkg-genchanges --build=binary -O../python-bx_0.9.0-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -2117,12 +2215,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/23433/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3981 and its subdirectories -I: Current time: Tue May 30 22:38:19 -12 2023 -I: pbuilder-time-stamp: 1685529499 +I: removing directory /srv/workspace/pbuilder/23433 and its subdirectories +I: Current time: Wed Jul 3 07:07:50 +14 2024 +I: pbuilder-time-stamp: 1719940070