Diff of the two buildlogs: -- --- b1/build.log 2024-01-08 05:35:15.161303049 +0000 +++ b2/build.log 2024-01-08 05:38:45.776265101 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Jan 7 17:33:40 -12 2024 -I: pbuilder-time-stamp: 1704692020 +I: Current time: Mon Feb 10 01:58:17 +14 2025 +I: pbuilder-time-stamp: 1739102297 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -29,49 +29,81 @@ dpkg-source: info: applying doc_ignore_exceptions.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2891422/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 9 11:58 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='351df7e7c00344719f53af18943b0561' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2891422' - PS1='# ' - PS2='> ' + INVOCATION_ID=9ce4cd1d48fc4263b05c493a2a0bde34 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3591760 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.yhI1r87u/pbuilderrc_KfZH --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.yhI1r87u/b1 --logfile b1/build.log python-gsd_2.7.0-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.104:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.yhI1r87u/pbuilderrc_0fSC --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.yhI1r87u/b2 --logfile b2/build.log python-gsd_2.7.0-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.104:3128 I: uname -a - Linux codethink02-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 7104 -rwxr-xr-x 1 root root 1346480 Apr 23 2023 bash @@ -129,15 +161,15 @@ -rwxr-xr-x 1 root root 68456 Sep 20 2022 readlink -rwxr-xr-x 1 root root 68592 Sep 20 2022 rm -rwxr-xr-x 1 root root 68480 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 68392 Jul 28 23:46 run-parts + -rwxr-xr-x 1 root root 68392 Jul 28 2023 run-parts -rwxr-xr-x 1 root root 134536 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash + lrwxrwxrwx 1 root root 9 Feb 9 11:58 sh -> /bin/bash -rwxr-xr-x 1 root root 68432 Sep 20 2022 sleep -rwxr-xr-x 1 root root 134088 Sep 20 2022 stty -rwsr-xr-x 1 root root 133312 Mar 23 2023 su -rwxr-xr-x 1 root root 68448 Sep 20 2022 sync -rwxr-xr-x 1 root root 539896 Apr 6 2023 tar - -rwxr-xr-x 1 root root 67904 Jul 28 23:46 tempfile + -rwxr-xr-x 1 root root 67904 Jul 28 2023 tempfile -rwxr-xr-x 1 root root 134160 Sep 20 2022 touch -rwxr-xr-x 1 root root 68384 Sep 20 2022 true -rwxr-xr-x 1 root root 67664 Mar 23 2023 ulockmgr_server @@ -157,7 +189,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/2891422/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -341,7 +373,7 @@ Get: 124 http://deb.debian.org/debian bookworm/main arm64 python3-sphinx all 5.3.0-4 [549 kB] Get: 125 http://deb.debian.org/debian bookworm/main arm64 sphinx-rtd-theme-common all 1.2.0+dfsg-1 [997 kB] Get: 126 http://deb.debian.org/debian bookworm/main arm64 python3-sphinx-rtd-theme all 1.2.0+dfsg-1 [27.7 kB] -Fetched 79.3 MB in 1s (101 MB/s) +Fetched 79.3 MB in 1s (83.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18171 files and directories currently installed.) @@ -746,8 +778,8 @@ Setting up tzdata (2023c-5+deb12u1) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Jan 8 05:34:25 UTC 2024. -Universal Time is now: Mon Jan 8 05:34:25 UTC 2024. +Local time is now: Sun Feb 9 11:59:18 UTC 2025. +Universal Time is now: Sun Feb 9 11:59:18 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... @@ -880,7 +912,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-gsd-2.7.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-gsd_2.7.0-2_source.changes +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bookworm +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-gsd-2.7.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-gsd_2.7.0-2_source.changes dpkg-buildpackage: info: source package python-gsd dpkg-buildpackage: info: source version 2.7.0-2 dpkg-buildpackage: info: source distribution unstable @@ -1034,7 +1070,7 @@ Copying gsd.egg-info to build/bdist.linux-arm64/wheel/gsd-2.7.0.egg-info running install_scripts creating build/bdist.linux-arm64/wheel/gsd-2.7.0.dist-info/WHEEL -creating '/build/reproducible-path/python-gsd-2.7.0/.pybuild/cpython3_3.11_gsd/.tmp-qb3aq_c2/gsd-2.7.0-cp311-cp311-linux_arm64.whl' and adding 'build/bdist.linux-arm64/wheel' to it +creating '/build/reproducible-path/python-gsd-2.7.0/.pybuild/cpython3_3.11_gsd/.tmp-2hxtfui1/gsd-2.7.0-cp311-cp311-linux_arm64.whl' and adding 'build/bdist.linux-arm64/wheel' to it adding 'gsd/__init__.py' adding 'gsd/__main__.py' adding 'gsd/conftest.py' @@ -1065,7 +1101,7 @@ loading intersphinx inventory from /usr/share/doc/python3/html/objects.inv... loading intersphinx inventory from https://hoomd-blue.readthedocs.io/en/latest/objects.inv... WARNING: failed to reach any of the inventories with the following issues: -intersphinx inventory 'https://hoomd-blue.readthedocs.io/en/latest/objects.inv' not fetchable due to : HTTPSConnectionPool(host='hoomd-blue.readthedocs.io', port=443): Max retries exceeded with url: /en/latest/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) +intersphinx inventory 'https://hoomd-blue.readthedocs.io/en/latest/objects.inv' not fetchable due to : HTTPSConnectionPool(host='hoomd-blue.readthedocs.io', port=443): Max retries exceeded with url: /en/latest/objects.inv (Caused by ProxyError('Cannot connect to proxy.', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) building [mo]: targets for 0 po files that are out of date building [html]: targets for 21 source files that are out of date updating environment: [new config] 21 added, 0 changed, 0 removed @@ -1077,7 +1113,7 @@ reading sources... [ 28%] credits reading sources... [ 33%] file-layer reading sources... [ 38%] fl-examples -/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. +/usr/lib/python3/dist-packages/IPython/paths.py:70: UserWarning: IPython parent '/nonexistent/second-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," reading sources... [ 42%] hoomd-examples implicit data copy when writing chunk: log/value/potential_energy @@ -1152,7 +1188,7 @@ writing output... [ 95%] specification writing output... [100%] style -/tmp/tmpzkcvsw87/docstring of gsd.fl:8: WARNING: 'any' reference target not found: numpy.ndarray +/tmp/tmp19sq6yum/docstring of gsd.fl:8: WARNING: 'any' reference target not found: numpy.ndarray /build/reproducible-path/python-gsd-2.7.0/.pybuild/cpython3_3.11_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd:3: WARNING: 'any' reference target not found: numpy.ndarray /build/reproducible-path/python-gsd-2.7.0/.pybuild/cpython3_3.11_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd:3: WARNING: 'any' reference target not found: numpy.ndarray /build/reproducible-path/python-gsd-2.7.0/.pybuild/cpython3_3.11_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd:9: WARNING: 'any' reference target not found: hoomd.State @@ -1230,9 +1266,9 @@ dpkg-gencontrol: warning: package python-gsd-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'python3-gsd' in '../python3-gsd_2.7.0-2_arm64.deb'. -dpkg-deb: building package 'python3-gsd-dbgsym' in '../python3-gsd-dbgsym_2.7.0-2_arm64.deb'. dpkg-deb: building package 'python-gsd-doc' in '../python-gsd-doc_2.7.0-2_all.deb'. +dpkg-deb: building package 'python3-gsd-dbgsym' in '../python3-gsd-dbgsym_2.7.0-2_arm64.deb'. +dpkg-deb: building package 'python3-gsd' in '../python3-gsd_2.7.0-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../python-gsd_2.7.0-2_arm64.buildinfo dpkg-genchanges --build=binary -O../python-gsd_2.7.0-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1241,12 +1277,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3591760/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2891422 and its subdirectories -I: Current time: Sun Jan 7 17:35:14 -12 2024 -I: pbuilder-time-stamp: 1704692114 +I: removing directory /srv/workspace/pbuilder/3591760 and its subdirectories +I: Current time: Mon Feb 10 02:01:43 +14 2025 +I: pbuilder-time-stamp: 1739102503