Diff of the two buildlogs: -- --- b1/build.log 2023-04-15 09:04:08.814657700 +0000 +++ b2/build.log 2023-04-15 09:08:10.759909477 +0000 @@ -1,136 +1,8 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Apr 14 21:00:21 -12 2023 -I: pbuilder-time-stamp: 1681549221 +I: Current time: Sat Apr 15 23:04:13 +14 2023 +I: pbuilder-time-stamp: 1681549453 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] -tar: ./bin: time stamp 2024-05-16 07:10:43 is 34337421.30380682 s in the future -tar: ./build: time stamp 2024-05-16 07:10:57 is 34337435.30354894 s in the future -tar: ./dev/shm: time stamp 2024-05-17 02:29:54 is 34406972.30347286 s in the future -tar: ./dev/null: time stamp 2024-05-16 07:10:28 is 34337406.30329876 s in the future -tar: ./dev/zero: time stamp 2024-05-16 07:10:28 is 34337406.3032366 s in the future -tar: ./dev/full: time stamp 2024-05-16 07:10:28 is 34337406.30318428 s in the future -tar: ./dev/random: time stamp 2024-05-16 07:10:28 is 34337406.3031346 s in the future -tar: ./dev/urandom: time stamp 2024-05-16 07:10:28 is 34337406.30308904 s in the future -tar: ./dev/tty: time stamp 2024-05-16 07:10:28 is 34337406.303039 s in the future -tar: ./dev/console: time stamp 2024-05-16 07:10:28 is 34337406.30298882 s in the future -tar: ./dev/pts: time stamp 2024-05-16 07:10:28 is 34337406.3029335 s in the future -tar: ./dev/ptmx: time stamp 2024-05-16 07:10:28 is 34337406.30288518 s in the future -tar: ./etc/resolv.conf: time stamp 2024-05-17 02:29:54 is 34406972.3027724 s in the future -tar: ./etc/mailname: time stamp 2024-05-17 02:29:54 is 34406972.30269292 s in the future -tar: ./etc/hostname: time stamp 2024-05-17 02:29:54 is 34406972.3026286 s in the future -tar: ./etc/hosts: time stamp 2024-05-17 02:29:54 is 34406972.30256634 s in the future -tar: ./etc/apt/sources.list: time stamp 2024-05-16 07:11:47 is 34337485.30236592 s in the future -tar: ./etc/apt/apt.conf.d/80proxy: time stamp 2024-05-16 07:11:47 is 34337485.3022657 s in the future -tar: ./etc/apt/apt.conf.d/15pbuilder: time stamp 2024-05-16 07:10:58 is 34337436.30209672 s in the future -tar: ./etc/apt/apt.conf.d: time stamp 2024-05-16 07:11:47 is 34337485.30205056 s in the future -tar: ./etc/apt/trusted.gpg.d: time stamp 2024-05-16 07:10:38 is 34337416.30002496 s in the future -tar: ./etc/apt: time stamp 2024-05-16 07:11:47 is 34337485.29994848 s in the future -tar: ./etc/cron.daily: time stamp 2024-05-16 07:11:13 is 34337451.29971556 s in the future -tar: ./etc/logrotate.d: time stamp 2024-05-16 07:11:13 is 34337451.29933256 s in the future -tar: ./etc/default: time stamp 2024-05-16 07:10:42 is 34337420.2982245 s in the future -tar: ./etc/dpkg/origins/default: time stamp 2024-05-16 07:10:28 is 34337406.2980202 s in the future -tar: ./etc/dpkg/origins: time stamp 2024-05-16 07:10:39 is 34337417.29797194 s in the future -tar: ./etc/dpkg/dpkg.cfg.d/02speedup: time 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./etc/pam.d/common-auth: time stamp 2024-05-16 07:10:43 is 34337421.28974568 s in the future -tar: ./etc/pam.d/common-account: time stamp 2024-05-16 07:10:43 is 34337421.2896469 s in the future -tar: ./etc/pam.d/common-password: time stamp 2024-05-16 07:10:43 is 34337421.28958338 s in the future -tar: ./etc/pam.d/common-session: time stamp 2024-05-16 07:10:43 is 34337421.28950706 s in the future -tar: ./etc/pam.d/common-session-noninteractive: time stamp 2024-05-16 07:10:43 is 34337421.2894333 s in the future -tar: ./etc/pam.d: time stamp 2024-05-16 07:10:43 is 34337421.28939292 s in the future -tar: ./etc/perl/Net: time stamp 2024-05-16 07:10:43 is 34337421.28926546 s in the future -tar: ./etc/init.d: time stamp 2024-05-16 07:10:39 is 34337417.28900678 s in the future -tar: ./etc/fstab: time stamp 2024-05-16 07:10:28 is 34337406.28893658 s in the future -tar: ./etc/opt: time stamp 2024-05-16 07:10:28 is 34337406.288791 s in the future -tar: ./etc/timezone: time stamp 2024-05-16 07:10:39 is 34337417.28872856 s in the future -tar: ./etc/environment: time stamp 2024-05-16 07:10:42 is 34337420.28862558 s in the future -tar: ./etc/.pwd.lock: time stamp 2024-05-16 07:10:42 is 34337420.28856886 s in the future -tar: ./etc/shadow: time stamp 2024-05-16 07:10:42 is 34337420.28840742 s in the future -tar: ./etc/passwd-: time stamp 2024-05-16 07:10:28 is 34337406.2882613 s in the future -tar: ./etc/passwd: time stamp 2024-05-16 07:10:42 is 34337420.28818756 s in the future -tar: ./etc/gshadow: time stamp 2024-05-16 07:10:42 is 34337420.2880594 s in the future -tar: ./etc/group-: time stamp 2024-05-16 07:10:28 is 34337406.28793726 s in the future -tar: ./etc/group: time stamp 2024-05-16 07:10:42 is 34337420.28786486 s in the future -tar: ./etc/subuid: time stamp 2024-05-16 07:10:43 is 34337421.28781014 s in the future -tar: ./etc/subgid: time stamp 2024-05-16 07:10:43 is 34337421.28775926 s in the future -tar: ./etc/shells: time stamp 2024-05-16 07:10:43 is 34337421.28769724 s in the future -tar: ./etc/gss: time stamp 2024-05-16 07:10:53 is 34337431.28759844 s in the future -tar: ./etc/ld.so.cache: time stamp 2024-05-16 07:11:13 is 34337451.28634412 s in the future -tar: ./lib: time stamp 2024-05-16 07:10:43 is 34337421.28620016 s in the future -tar: ./media: time stamp 2024-05-16 07:10:28 is 34337406.28614066 s in the future -tar: ./mnt: time stamp 2024-05-16 07:10:28 is 34337406.28609054 s in the future -tar: ./opt: time stamp 2024-05-16 07:10:28 is 34337406.28604058 s in the future -tar: ./root: time stamp 2024-05-16 07:10:28 is 34337406.28584484 s in the future -tar: ./run/mount: time stamp 2024-05-16 07:10:28 is 34337406.28570746 s in the future -tar: ./run/lock: time stamp 2024-05-16 07:10:28 is 34337406.2856346 s in the future -tar: ./sbin: time stamp 2024-05-16 07:10:43 is 34337421.28557672 s in the future -tar: ./srv: time stamp 2024-05-16 07:10:28 is 34337406.28551512 s in the future -tar: ./tmp: time stamp 2024-05-17 02:30:01 is 34406979.28542626 s in the future -tar: ./usr/lib/aarch64-linux-gnu/e2fsprogs: time stamp 2024-05-16 07:10:32 is 34337410.28475828 s in the future -tar: ./usr/lib/aarch64-linux-gnu/gconv/gconv-modules.d: time stamp 2024-05-16 07:10:33 is 34337411.28381168 s in the future -tar: ./usr/lib/aarch64-linux-gnu/gconv: time stamp 2024-05-16 07:10:33 is 34337411.0022817 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/B: time stamp 2024-05-16 07:10:36 is 34337414.00084542 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/CORE: time stamp 2024-05-16 07:10:36 is 34337413.90683204 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Compress/Raw: time stamp 2024-05-16 07:10:36 is 34337413.90548626 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Data: time stamp 2024-05-16 07:10:36 is 34337413.90426752 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Devel: time stamp 2024-05-16 07:10:36 is 34337413.89536394 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Digest: time stamp 2024-05-16 07:10:36 is 34337413.89504228 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Encode/CN: time stamp 2024-05-16 07:10:36 is 34337413.89485892 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Encode/JP: time stamp 2024-05-16 07:10:36 is 34337413.89466088 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Encode/KR: time stamp 2024-05-16 07:10:36 is 34337413.8945345 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Encode/MIME/Header: time stamp 2024-05-16 07:10:36 is 34337413.89345956 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Encode/MIME: time stamp 2024-05-16 07:10:36 is 34337413.89319574 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Encode/Unicode: time stamp 2024-05-16 07:10:36 is 34337413.89303918 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Encode: time stamp 2024-05-16 07:10:36 is 34337413.89104574 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/File/Spec: time stamp 2024-05-16 07:10:36 is 34337413.88830724 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/File: time stamp 2024-05-16 07:10:36 is 34337413.88796674 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Filter/Util: time stamp 2024-05-16 07:10:36 is 34337413.8877517 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Hash/Util: time stamp 2024-05-16 07:10:36 is 34337413.88659956 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Hash: time stamp 2024-05-16 07:10:36 is 34337413.88638988 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/I18N: time stamp 2024-05-16 07:10:36 is 34337413.88624412 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/IO/Socket: time stamp 2024-05-16 07:10:36 is 34337413.88507972 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/IO: time stamp 2024-05-16 07:10:36 is 34337413.8835708 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/IPC: time stamp 2024-05-16 07:10:36 is 34337413.88321544 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/List/Util: time stamp 2024-05-16 07:10:36 is 34337413.88305848 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/List: time stamp 2024-05-16 07:10:36 is 34337413.88205402 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/MIME: time stamp 2024-05-16 07:10:36 is 34337413.88183064 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Math/BigInt: time stamp 2024-05-16 07:10:36 is 34337413.88166442 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/PerlIO: time stamp 2024-05-16 07:10:36 is 34337413.88136714 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Scalar: time stamp 2024-05-16 07:10:36 is 34337413.88119676 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Sub: time stamp 2024-05-16 07:10:36 is 34337413.88009042 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Sys: time stamp 2024-05-16 07:10:36 is 34337413.87977272 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Time: time stamp 2024-05-16 07:10:36 is 34337413.87844906 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Unicode/Collate: time stamp 2024-05-16 07:10:36 is 34337413.87729748 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/Unicode: time stamp 2024-05-16 07:10:36 is 34337413.8761825 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/asm: time stamp 2024-05-16 07:10:36 is 34337413.87530756 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/asm-generic: time stamp 2024-05-16 07:10:36 is 34337413.87346952 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/B: time stamp 2024-05-16 07:10:36 is 34337413.87072366 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Compress/Raw/Bzip2: time stamp 2024-05-16 07:10:36 is 34337413.86947536 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Compress/Raw/Zlib: time stamp 2024-05-16 07:10:36 is 34337413.86845134 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Cwd: time stamp 2024-05-16 07:10:36 is 34337413.86726218 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/DB_File: time stamp 2024-05-16 07:10:36 is 34337413.86612278 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Data/Dumper: time stamp 2024-05-16 07:10:36 is 34337413.86518956 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Devel/Peek: time stamp 2024-05-16 07:10:36 is 34337413.86419648 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Digest/MD5: time stamp 2024-05-16 07:10:36 is 34337413.8629377 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Digest/SHA: time stamp 2024-05-16 07:10:36 is 34337413.86191684 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/Byte: time stamp 2024-05-16 07:10:36 is 34337413.85689692 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/CN: time stamp 2024-05-16 07:10:36 is 34337413.82891276 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/EBCDIC: time stamp 2024-05-16 07:10:36 is 34337413.82782126 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/JP: time stamp 2024-05-16 07:10:36 is 34337413.79255322 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/KR: time stamp 2024-05-16 07:10:36 is 34337413.7611741 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/Symbol: time stamp 2024-05-16 07:10:36 is 34337413.76009884 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/TW: time stamp 2024-05-16 07:10:36 is 34337413.73254248 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode/Unicode: time stamp 2024-05-16 07:10:36 is 34337413.7311958 s in the future -tar: ./usr/lib/aarch64-linux-gnu/perl/5.36.0/auto/Encode: time stamp 2024-05-16 07:10:36 is 34337413.73031274 s in the future I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem @@ -144,7 +16,7 @@ I: copying [./r-bioc-oligo_1.62.2+ds.orig.tar.xz] I: copying [./r-bioc-oligo_1.62.2+ds-1.debian.tar.xz] I: Extracting source -gpgv: Signature made Sat Jan 21 02:02:55 2023 -12 +gpgv: Signature made Sun Jan 22 04:02:55 2023 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -156,52 +28,84 @@ dpkg-source: info: applying runit_should_not_write_to_usr.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/13610/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/D01_modify_environment starting +debug: Running on codethink14-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 15 23:04 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' - DISTRIBUTION='bookworm' - HOME='/var/lib/jenkins' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/var/lib/jenkins + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='13610' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=19829 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.O0w6YO4A/pbuilderrc_Vls8 --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.O0w6YO4A/b1 --logfile b1/build.log r-bioc-oligo_1.62.2+ds-1.dsc' - SUDO_GID='117' - SUDO_UID='110' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - USERNAME='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.16:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.O0w6YO4A/pbuilderrc_P42u --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.O0w6YO4A/b2 --logfile b2/build.log --extrapackages usrmerge r-bioc-oligo_1.62.2+ds-1.dsc' + SUDO_GID=117 + SUDO_UID=110 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + USERNAME=root + _='I: set' + http_proxy=http://192.168.101.16:3128 I: uname -a - Linux codethink13-arm64 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux + Linux i-capture-the-hostname 4.15.0-208-generic #220-Ubuntu SMP Mon Mar 20 14:28:12 UTC 2023 aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 16 07:10 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/13610/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Apr 14 00:50 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -487,7 +391,7 @@ Get: 222 http://deb.debian.org/debian bookworm/main arm64 r-cran-ff arm64 4.0.9+ds-1 [957 kB] Get: 223 http://deb.debian.org/debian bookworm/main arm64 r-bioc-oligoclasses all 1.60.0-1 [1256 kB] Get: 224 http://deb.debian.org/debian bookworm/main arm64 r-bioc-preprocesscore arm64 1.60.2+ds-1 [141 kB] -Fetched 156 MB in 4s (40.7 MB/s) +Fetched 156 MB in 3s (45.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package readline-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) @@ -1420,8 +1324,17 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/r-bioc-oligo-1.62.2+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../r-bioc-oligo_1.62.2+ds-1_source.changes +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/A99_set_merged_usr finished +hostname: Temporary failure in name resolution +I: Running cd /build/r-bioc-oligo-1.62.2+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../r-bioc-oligo_1.62.2+ds-1_source.changes dpkg-buildpackage: info: source package r-bioc-oligo dpkg-buildpackage: info: source version 1.62.2+ds-1 dpkg-buildpackage: info: source distribution unstable @@ -1617,12 +1530,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/19829/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/13610 and its subdirectories -I: Current time: Fri May 17 03:27:07 -12 2024 -I: pbuilder-time-stamp: 1715959627 +I: removing directory /srv/workspace/pbuilder/19829 and its subdirectories +I: Current time: Sat Apr 15 23:08:09 +14 2023 +I: pbuilder-time-stamp: 1681549689