Diff of the two buildlogs: -- --- b1/build.log 2023-05-26 16:13:05.507442562 +0000 +++ b2/build.log 2023-05-26 16:17:14.236550222 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri May 26 04:02:50 -12 2023 -I: pbuilder-time-stamp: 1685116970 +I: Current time: Sat May 27 06:13:32 +14 2023 +I: pbuilder-time-stamp: 1685117612 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -16,7 +16,7 @@ I: copying [./cyvcf2_0.30.18.orig.tar.gz] I: copying [./cyvcf2_0.30.18-1.debian.tar.xz] I: Extracting source -gpgv: Signature made Wed Oct 5 21:53:45 2022 -12 +gpgv: Signature made Thu Oct 6 23:53:45 2022 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -29,135 +29,167 @@ dpkg-source: info: applying i386.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/21562/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/D01_modify_environment starting +debug: Running on virt64c. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 May 27 06:13 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='e4b12545a6ff47f4b1757c3c5bd91e43' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='21562' - PS1='# ' - PS2='> ' + INVOCATION_ID=cf11d186b00f4974817ad2e4edce08a6 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=17148 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QKkSMb6H/pbuilderrc_z2FZ --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QKkSMb6H/b1 --logfile b1/build.log cyvcf2_0.30.18-1.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QKkSMb6H/pbuilderrc_cVXt --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QKkSMb6H/b2 --logfile b2/build.log --extrapackages usrmerge cyvcf2_0.30.18-1.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux ff4a 5.10.0-23-armmp-lpae #1 SMP Debian 5.10.179-1 (2023-05-12) armv7l GNU/Linux + Linux i-capture-the-hostname 5.10.0-23-arm64 #1 SMP Debian 5.10.179-1 (2023-05-12) aarch64 GNU/Linux I: ls -l /bin total 5072 - -rwxr-xr-x 1 root root 838488 Apr 23 09:24 bash - -rwxr-xr-x 3 root root 67144 Sep 18 2022 bunzip2 - -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzcat - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep - -rwxr-xr-x 3 root root 67144 Sep 18 2022 bzip2 - -rwxr-xr-x 1 root root 67112 Sep 18 2022 bzip2recover - lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore - -rwxr-xr-x 1 root root 67632 Sep 20 2022 cat - -rwxr-xr-x 1 root root 67676 Sep 20 2022 chgrp - -rwxr-xr-x 1 root root 67644 Sep 20 2022 chmod - -rwxr-xr-x 1 root root 67684 Sep 20 2022 chown - -rwxr-xr-x 1 root root 133532 Sep 20 2022 cp - -rwxr-xr-x 1 root root 132868 Jan 5 01:20 dash - -rwxr-xr-x 1 root root 133220 Sep 20 2022 date - -rwxr-xr-x 1 root root 67732 Sep 20 2022 dd - -rwxr-xr-x 1 root root 68104 Sep 20 2022 df - -rwxr-xr-x 1 root root 133632 Sep 20 2022 dir - -rwxr-xr-x 1 root root 59128 Mar 22 21:02 dmesg - lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname - -rwxr-xr-x 1 root root 67560 Sep 20 2022 echo - -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep - -rwxr-xr-x 1 root root 67548 Sep 20 2022 false - -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep - -rwxr-xr-x 1 root root 55748 Mar 22 21:02 findmnt - -rwsr-xr-x 1 root root 26208 Mar 22 20:15 fusermount - -rwxr-xr-x 1 root root 128608 Jan 24 02:43 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 64220 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 67032 Dec 19 01:33 hostname - -rwxr-xr-x 1 root root 67720 Sep 20 2022 ln - -rwxr-xr-x 1 root root 35132 Mar 22 21:51 login - -rwxr-xr-x 1 root root 133632 Sep 20 2022 ls - -rwxr-xr-x 1 root root 136808 Mar 22 21:02 lsblk - -rwxr-xr-x 1 root root 67800 Sep 20 2022 mkdir - -rwxr-xr-x 1 root root 67764 Sep 20 2022 mknod - -rwxr-xr-x 1 root root 67596 Sep 20 2022 mktemp - -rwxr-xr-x 1 root root 38504 Mar 22 21:02 more - -rwsr-xr-x 1 root root 38496 Mar 22 21:02 mount - -rwxr-xr-x 1 root root 9824 Mar 22 21:02 mountpoint - -rwxr-xr-x 1 root root 133532 Sep 20 2022 mv - lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 67608 Sep 20 2022 pwd - lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash - -rwxr-xr-x 1 root root 67600 Sep 20 2022 readlink - -rwxr-xr-x 1 root root 67672 Sep 20 2022 rm - -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir - -rwxr-xr-x 1 root root 67400 Nov 2 2022 run-parts - -rwxr-xr-x 1 root root 133372 Jan 5 07:55 sed - lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash - -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep - -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty - -rwsr-xr-x 1 root root 50800 Mar 22 21:02 su - -rwxr-xr-x 1 root root 67584 Sep 20 2022 sync - -rwxr-xr-x 1 root root 336764 Apr 6 02:25 tar - -rwxr-xr-x 1 root root 67144 Nov 2 2022 tempfile - -rwxr-xr-x 1 root root 133224 Sep 20 2022 touch - -rwxr-xr-x 1 root root 67548 Sep 20 2022 true - -rwxr-xr-x 1 root root 9768 Mar 22 20:15 ulockmgr_server - -rwsr-xr-x 1 root root 22108 Mar 22 21:02 umount - -rwxr-xr-x 1 root root 67572 Sep 20 2022 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 133632 Sep 20 2022 vdir - -rwxr-xr-x 1 root root 42608 Mar 22 21:02 wdctl - lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/21562/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 838488 Apr 24 11:24 bash + -rwxr-xr-x 3 root root 67144 Sep 19 2022 bunzip2 + -rwxr-xr-x 3 root root 67144 Sep 19 2022 bzcat + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4893 Nov 28 2021 bzexe + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep + -rwxr-xr-x 3 root root 67144 Sep 19 2022 bzip2 + -rwxr-xr-x 1 root root 67112 Sep 19 2022 bzip2recover + lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore + -rwxr-xr-x 1 root root 67632 Sep 21 2022 cat + -rwxr-xr-x 1 root root 67676 Sep 21 2022 chgrp + -rwxr-xr-x 1 root root 67644 Sep 21 2022 chmod + -rwxr-xr-x 1 root root 67684 Sep 21 2022 chown + -rwxr-xr-x 1 root root 133532 Sep 21 2022 cp + -rwxr-xr-x 1 root root 132868 Jan 6 03:20 dash + -rwxr-xr-x 1 root root 133220 Sep 21 2022 date + -rwxr-xr-x 1 root root 67732 Sep 21 2022 dd + -rwxr-xr-x 1 root root 68104 Sep 21 2022 df + -rwxr-xr-x 1 root root 133632 Sep 21 2022 dir + -rwxr-xr-x 1 root root 59128 Mar 23 23:02 dmesg + lrwxrwxrwx 1 root root 8 Dec 20 03:33 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Dec 20 03:33 domainname -> hostname + -rwxr-xr-x 1 root root 67560 Sep 21 2022 echo + -rwxr-xr-x 1 root root 41 Jan 25 04:43 egrep + -rwxr-xr-x 1 root root 67548 Sep 21 2022 false + -rwxr-xr-x 1 root root 41 Jan 25 04:43 fgrep + -rwxr-xr-x 1 root root 55748 Mar 23 23:02 findmnt + -rwsr-xr-x 1 root root 26208 Mar 23 22:15 fusermount + -rwxr-xr-x 1 root root 128608 Jan 25 04:43 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 64220 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 67032 Dec 20 03:33 hostname + -rwxr-xr-x 1 root root 67720 Sep 21 2022 ln + -rwxr-xr-x 1 root root 35132 Mar 23 23:51 login + -rwxr-xr-x 1 root root 133632 Sep 21 2022 ls + -rwxr-xr-x 1 root root 136808 Mar 23 23:02 lsblk + -rwxr-xr-x 1 root root 67800 Sep 21 2022 mkdir + -rwxr-xr-x 1 root root 67764 Sep 21 2022 mknod + -rwxr-xr-x 1 root root 67596 Sep 21 2022 mktemp + -rwxr-xr-x 1 root root 38504 Mar 23 23:02 more + -rwsr-xr-x 1 root root 38496 Mar 23 23:02 mount + -rwxr-xr-x 1 root root 9824 Mar 23 23:02 mountpoint + -rwxr-xr-x 1 root root 133532 Sep 21 2022 mv + lrwxrwxrwx 1 root root 8 Dec 20 03:33 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 3 20:25 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 67608 Sep 21 2022 pwd + lrwxrwxrwx 1 root root 4 Apr 24 11:24 rbash -> bash + -rwxr-xr-x 1 root root 67600 Sep 21 2022 readlink + -rwxr-xr-x 1 root root 67672 Sep 21 2022 rm + -rwxr-xr-x 1 root root 67600 Sep 21 2022 rmdir + -rwxr-xr-x 1 root root 67400 Nov 3 2022 run-parts + -rwxr-xr-x 1 root root 133372 Jan 6 09:55 sed + lrwxrwxrwx 1 root root 9 May 27 06:13 sh -> /bin/bash + -rwxr-xr-x 1 root root 67584 Sep 21 2022 sleep + -rwxr-xr-x 1 root root 67644 Sep 21 2022 stty + -rwsr-xr-x 1 root root 50800 Mar 23 23:02 su + -rwxr-xr-x 1 root root 67584 Sep 21 2022 sync + -rwxr-xr-x 1 root root 336764 Apr 7 04:25 tar + -rwxr-xr-x 1 root root 67144 Nov 3 2022 tempfile + -rwxr-xr-x 1 root root 133224 Sep 21 2022 touch + -rwxr-xr-x 1 root root 67548 Sep 21 2022 true + -rwxr-xr-x 1 root root 9768 Mar 23 22:15 ulockmgr_server + -rwsr-xr-x 1 root root 22108 Mar 23 23:02 umount + -rwxr-xr-x 1 root root 67572 Sep 21 2022 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 133632 Sep 21 2022 vdir + -rwxr-xr-x 1 root root 42608 Mar 23 23:02 wdctl + lrwxrwxrwx 1 root root 8 Dec 20 03:33 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -317,7 +349,7 @@ Get: 93 http://deb.debian.org/debian bookworm/main armhf python3-py all 1.11.0-1 [89.2 kB] Get: 94 http://deb.debian.org/debian bookworm/main armhf python3-pytest all 7.2.1-2 [236 kB] Get: 95 http://deb.debian.org/debian bookworm/main armhf python3-setuptools all 66.1.1-1 [521 kB] -Fetched 46.3 MB in 4s (10.7 MB/s) +Fetched 46.3 MB in 1s (44.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19326 files and directories currently installed.) @@ -715,8 +747,19 @@ Writing extended state information... Building tag database... -> Finished parsing the build-deps +Reading package lists... +Building dependency tree... +Reading state information... +usrmerge is already the newest version (35). +0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/cyvcf2-0.30.18/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cyvcf2_0.30.18-1_source.changes +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/A99_set_merged_usr starting +Re-configuring usrmerge... +removed '/etc/unsupported-skip-usrmerge-conversion' +The system has been successfully converted. +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/cyvcf2-0.30.18/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cyvcf2_0.30.18-1_source.changes dpkg-buildpackage: info: source package cyvcf2 dpkg-buildpackage: info: source version 0.30.18-1 dpkg-buildpackage: info: source distribution unstable @@ -734,11 +777,11 @@ 'build/scripts-3.11' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean -make[1]: Entering directory '/build/cyvcf2-0.30.18' +make[1]: ingresso nella directory «/build/cyvcf2-0.30.18» dh_clean rm -rf cyvcf2.egg-info cyvcf2/cyvcf2.c __o.vcf find . -name "*.so" -delete -make[1]: Leaving directory '/build/cyvcf2-0.30.18' +make[1]: uscita dalla directory «/build/cyvcf2-0.30.18» debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild @@ -754,14 +797,14 @@ running build_py creating /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2 copying cyvcf2/cli.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2 -copying cyvcf2/__init__.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2 copying cyvcf2/__main__.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2 +copying cyvcf2/__init__.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2 creating /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests copying cyvcf2/tests/test_hemi.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests +copying cyvcf2/tests/test_cli.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests +copying cyvcf2/tests/test_writer.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests copying cyvcf2/tests/test_reader.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests copying cyvcf2/tests/__init__.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests -copying cyvcf2/tests/test_writer.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests -copying cyvcf2/tests/test_cli.py -> /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests running egg_info creating cyvcf2.egg-info writing cyvcf2.egg-info/PKG-INFO @@ -846,7 +889,7 @@ | ^~~~~ arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/cyvcf2-0.30.18=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-cpython-311/cyvcf2/cyvcf2.o build/temp.linux-armhf-cpython-311/cyvcf2/helpers.o -L/usr/lib/arm-linux-gnueabihf -lz -lbz2 -llzma -lcurl -lssl -lhts -lcrypt -o /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.cpython-311-arm-linux-gnueabihf.so debian/rules override_dh_auto_test -make[1]: Entering directory '/build/cyvcf2-0.30.18' +make[1]: ingresso nella directory «/build/cyvcf2-0.30.18» dh_auto_test I: pybuild base:240: cd /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build; python3.11 -m pytest ============================= test session starts ============================== @@ -860,10 +903,10 @@ .......................................... [ 88%] cyvcf2/tests/test_writer.py ........... [100%] -============================= 99 passed in 14.13s ============================== +============================== 99 passed in 3.99s ============================== # clean up after testing find . -name out.vcf -delete -make[1]: Leaving directory '/build/cyvcf2-0.30.18' +make[1]: uscita dalla directory «/build/cyvcf2-0.30.18» create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -896,91 +939,91 @@ creating /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11 creating /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages creating /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cli.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.pxd -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 +creating /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__pycache__ +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/__pycache__/cli.cpython-311.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__pycache__ +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/__pycache__/__init__.cpython-311.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__pycache__ copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.pyx -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.c -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/relatedness.h -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.cpython-311-arm-linux-gnueabihf.so -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.pxd -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/helpers.c -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/helpers.h -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 creating /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz.tbi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_gt_alt_freqs.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-format-string.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-haploidX.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/issue_198.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/issue_44.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_hemi.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/bug.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-alt-repr.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz.tbi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/empty.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/seg.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.isa.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.vcf.gz.tbi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-genotypes.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_gt_bases.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_reader.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__init__.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_writer.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/o.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/no-seq-len.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/no-seq-names.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-diff.csi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_cli.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-invalid-header.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.snpeff.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf.csi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-hemi.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests creating /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__pycache__/test_writer.cpython-311-pytest-7.2.1.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__pycache__/__init__.cpython-311.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__pycache__/test_cli.cpython-311-pytest-7.2.1.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__pycache__/test_hemi.cpython-311-pytest-7.2.1.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__pycache__/test_reader.cpython-311-pytest-7.2.1.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/decomposed.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__pycache__/test_writer.cpython-311-pytest-7.2.1.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__pycache__/__init__.cpython-311.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__pycache__ +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/no-seq-names.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/seg.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/issue_44.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/empty.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/no-seq-len.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.bug.117.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-haploidX.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.comp_het.3.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-genotypes.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_hemi.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-invalid-header.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.mnp.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/__init__.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz.tbi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/o.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_cli.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/decomposed.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-strict-gt-option-flag.vcf.gz.tbi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.snpeff.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_gt_bases.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-diff.csi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_writer.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/issue_198.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_gt_alt_freqs.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-hemi.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test_reader.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.vcf.gz.tbi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/bug.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/__init__.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-format-string.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.isa.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-alt-repr.vcf -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test.snpeff.bcf.csi -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/tests/test-multiallelic-homozygous-alt.vcf.gz -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cli.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.cpython-311-arm-linux-gnueabihf.so -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/__main__.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 -creating /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__pycache__ -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/__pycache__/__init__.cpython-311.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__pycache__ -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/__pycache__/cli.cpython-311.pyc -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__pycache__ -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/cyvcf2.c -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 -copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/helpers.h -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 -byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/cli.py to cli.cpython-311.pyc +copying /build/cyvcf2-0.30.18/.pybuild/cpython3_3.11_cyvcf2/build/cyvcf2/__init__.py -> /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2 byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/test_hemi.py to test_hemi.cpython-311.pyc +byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/test_cli.py to test_cli.cpython-311.pyc +byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/test_writer.py to test_writer.cpython-311.pyc byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/test_reader.py to test_reader.cpython-311.pyc byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/test_writer.py to test_writer.cpython-311.pyc -byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/tests/test_cli.py to test_cli.cpython-311.pyc -byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/cli.py to cli.cpython-311.pyc byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__main__.py to __main__.cpython-311.pyc +byte-compiling /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2/__init__.py to __init__.cpython-311.pyc running install_egg_info Copying cyvcf2.egg-info to /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/cyvcf2-0.30.18.egg-info Skipping SOURCES.txt running install_scripts Installing cyvcf2 script to /build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/bin debian/rules override_dh_install -make[1]: Entering directory '/build/cyvcf2-0.30.18' +make[1]: ingresso nella directory «/build/cyvcf2-0.30.18» dh_numpy3 dh_install -make[1]: Leaving directory '/build/cyvcf2-0.30.18' +make[1]: uscita dalla directory «/build/cyvcf2-0.30.18» dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman -make[1]: Entering directory '/build/cyvcf2-0.30.18' +make[1]: ingresso nella directory «/build/cyvcf2-0.30.18» PATH=$PATH:/build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/bin \ PYTHONPATH=/build/cyvcf2-0.30.18/debian/python3-cyvcf2/usr/lib/python3.11/dist-packages/ \ help2man --no-info \ --name="fast parsing of VCF and BCF including region-queries" \ --version-string=0.30.18 cyvcf2 > debian/cyvcf2.1 dh_installman -make[1]: Leaving directory '/build/cyvcf2-0.30.18' +make[1]: uscita dalla directory «/build/cyvcf2-0.30.18» dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild @@ -997,8 +1040,8 @@ dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild -dpkg-deb: building package 'python3-cyvcf2-dbgsym' in '../python3-cyvcf2-dbgsym_0.30.18-1_armhf.deb'. -dpkg-deb: building package 'python3-cyvcf2' in '../python3-cyvcf2_0.30.18-1_armhf.deb'. +dpkg-deb: generazione del pacchetto "python3-cyvcf2" in "../python3-cyvcf2_0.30.18-1_armhf.deb". +dpkg-deb: generazione del pacchetto "python3-cyvcf2-dbgsym" in "../python3-cyvcf2-dbgsym_0.30.18-1_armhf.deb". dpkg-genbuildinfo --build=binary -O../cyvcf2_0.30.18-1_armhf.buildinfo dpkg-genchanges --build=binary -O../cyvcf2_0.30.18-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1007,12 +1050,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/17148/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/21562 and its subdirectories -I: Current time: Fri May 26 04:12:58 -12 2023 -I: pbuilder-time-stamp: 1685117578 +I: removing directory /srv/workspace/pbuilder/17148 and its subdirectories +I: Current time: Sat May 27 06:17:10 +14 2023 +I: pbuilder-time-stamp: 1685117830