Diff of the two buildlogs: -- --- b1/build.log 2024-01-12 09:58:28.588179527 +0000 +++ b2/build.log 2024-01-12 10:29:12.695753723 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Jan 11 21:18:53 -12 2024 -I: pbuilder-time-stamp: 1705051133 +I: Current time: Fri Jan 12 23:59:37 +14 2024 +I: pbuilder-time-stamp: 1705053577 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration @@ -36,49 +36,81 @@ dpkg-source: info: applying 40_mstop_movies.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/10651/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/D01_modify_environment starting +debug: Running on virt64a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 12 10:00 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='bookworm' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.15(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=bookworm + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='f99904eeb3b3423db934cd2863aff63d' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='10651' - PS1='# ' - PS2='> ' + INVOCATION_ID=ccdcac56cde848dca5773efbd83dc870 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=27085 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.d4zgNgKH/pbuilderrc_gnCj --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.d4zgNgKH/b1 --logfile b1/build.log pymol_2.5.0+dfsg-1.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.d4zgNgKH/pbuilderrc_5wUC --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.d4zgNgKH/b2 --logfile b2/build.log pymol_2.5.0+dfsg-1.dsc' + SUDO_GID=114 + SUDO_UID=108 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32a 6.1.0-17-armmp-lpae #1 SMP Debian 6.1.69-1 (2023-12-30) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux I: ls -l /bin total 4964 -rwxr-xr-x 1 root root 838488 Apr 23 2023 bash @@ -138,7 +170,7 @@ -rwxr-xr-x 1 root root 67600 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 14152 Jul 28 23:46 run-parts -rwxr-xr-x 1 root root 133372 Jan 5 2023 sed - lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 12 10:00 sh -> /bin/bash -rwxr-xr-x 1 root root 67584 Sep 20 2022 sleep -rwxr-xr-x 1 root root 67644 Sep 20 2022 stty -rwsr-xr-x 1 root root 50800 Mar 23 2023 su @@ -164,7 +196,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/10651/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -480,7 +512,7 @@ Get: 248 http://deb.debian.org/debian bookworm/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 249 http://deb.debian.org/debian bookworm/main armhf texlive-base all 2022.20230122-3 [21.9 MB] Get: 250 http://deb.debian.org/debian bookworm/main armhf texlive-latex-base all 2022.20230122-3 [1182 kB] -Fetched 160 MB in 8s (18.9 MB/s) +Fetched 160 MB in 8s (19.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17881 files and directories currently installed.) @@ -1520,7 +1552,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/pymol-2.5.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pymol_2.5.0+dfsg-1_source.changes +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bookworm +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/pymol-2.5.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../pymol_2.5.0+dfsg-1_source.changes dpkg-buildpackage: info: source package pymol dpkg-buildpackage: info: source version 2.5.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable @@ -1560,233 +1596,233 @@ running build running build_py creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol2 -copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol2 copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol2 -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/startup -copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/startup -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins -copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/demo -copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/demo -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal -copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal -copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal -copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal +copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol2 creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/editor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/importing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/helping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/menu.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/xray.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/api.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/selector.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/querying.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/util.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/internal.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/locking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/constants_palette.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/parser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/creating.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/checking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/parsing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/save_shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/externing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/completing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/movie.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/internal.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/moving.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/preset.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/headering.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/constants.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/util.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/editor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/completing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/selector.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/headering.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/preset.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/computing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/editing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/creating.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/callback.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/editing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/locking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/constants.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/helping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol copying modules/pymol/povray.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -copying modules/pymol/setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins -copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins -copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins -copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins -copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins -copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins -copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins +copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/menu.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/checking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/parser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/xray.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/api.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/save_shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/importing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/moving.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/externing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol +copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard -copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins +copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins +copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins +copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins +copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins +copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins +copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/stereochemistry copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/stereochemistry creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/Qt copying modules/pymol/Qt/utils.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/Qt copying modules/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/Qt +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax +copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax +copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax +copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax +copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/place.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/charge.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/protein.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/place.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/brick.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/cif.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/lst.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/cif.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/mol.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/protein.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/mae.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/brick.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/models.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/gms.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/mol.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/models.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/map.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/arc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy +copying modules/chempy/gms.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy copying modules/chempy/mass.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/mae.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/arc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -copying modules/chempy/lst.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fragments -copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fragments creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker -copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker -copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker +copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker +copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fragments +copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fragments +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ +copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ +copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ +copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ +copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf +copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf +copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin -copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin -copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin +copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin +copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fast copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fast -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf -copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf -copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ -copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ -copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ -copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ -copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax -copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax -copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax -copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax -copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax -copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/startup +copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/startup +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins +copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/demo +copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/demo +creating /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal +copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal +copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal +copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms -copying modules/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms +copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms running build_ext building 'pymol._cmd' extension creating build/temp.linux-armhf-3.11 @@ -1807,23 +1843,9 @@ creating build/temp.linux-armhf-3.11/ov/src arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD build/generated/ShaderText.cpp -o build/temp.linux-armhf-3.11/build/generated/ShaderText.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function 'PlugIOManagerInitAll': -contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:271:1: warning: this 'if' clause does not guard... [-Wmisleading-indentation] - 271 | if(ok) ok = ok && (molfile_xyzplugin_init() == VMDPLUGIN_SUCCESS); - | ^~ -contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:273:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' - 273 | if(ok) { - | ^~ -contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function 'PlugIOManagerFreeAll': -contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:411:1: warning: this 'if' clause does not guard... [-Wmisleading-indentation] - 411 | if(ok) ok = ok && (molfile_xyzplugin_fini() == VMDPLUGIN_SUCCESS); - | ^~ -contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:413:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' - 413 | return ok; - | ^~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function 'read_dlpoly_config_structure': contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:292:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 292 | if (NULL == fgets(fbuffer, 1024, data->file)) @@ -1839,6 +1861,25 @@ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:554:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 554 | fgets(fbuffer, 1024, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function 'PlugIOManagerInitAll': +contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:271:1: warning: this 'if' clause does not guard... [-Wmisleading-indentation] + 271 | if(ok) ok = ok && (molfile_xyzplugin_init() == VMDPLUGIN_SUCCESS); + | ^~ +contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:273:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' + 273 | if(ok) { + | ^~ +contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c: In function 'PlugIOManagerFreeAll': +contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:411:1: warning: this 'if' clause does not guard... [-Wmisleading-indentation] + 411 | if(ok) ok = ok && (molfile_xyzplugin_fini() == VMDPLUGIN_SUCCESS); + | ^~ +contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c:413:8: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' + 413 | return ok; + | ^~~~~~ +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function 'read_dlpoly_config_structure': +contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:362:5: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation] + 362 | strncpy(atom->name, buf, sizeof(atom->name)); + | ^ contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp: In function 'void* open_plt_read(const char*, const char*, int*)': contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:69:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 69 | fread(intHeader, sizeof(int), 5, fd); @@ -1846,17 +1887,39 @@ contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp:82:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 82 | fread(floatHeader, sizeof(float), 6, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function 'read_dlpoly_config_structure': -contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:362:5: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation] - 362 | strncpy(atom->name, buf, sizeof(atom->name)); - | ^ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'abinit_readline': contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:279:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 279 | for (i = 0; i < strlen(line); ++i) { | ^ +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'DEN_read_volumetric_data': +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:970:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 970 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:971:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 971 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'POT_read_volumetric_data': +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1113:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 1113 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1114:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 1114 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'abinit_header': +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1511:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 1511 | fread(skip, 1, 8, fp); + | ^~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'GEO_read_next_timestep': +contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:619:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] + 619 | fscanf(data->file, "%*s %f %f %f", &x, &y, &z); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:70: +contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: +contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] + 160 | static int get_pte_idx_from_string(const char *label) { + | ^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c: In function 'read_dlpoly_structure': contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c:267:5: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 4095 [-Wstringop-truncation] 267 | strncpy(atom->name, buf, sizeof(atom->name)); @@ -1891,33 +1954,6 @@ contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp:183:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 183 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'DEN_read_volumetric_data': -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:970:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 970 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:971:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 971 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'POT_read_volumetric_data': -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1113:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 1113 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1114:5: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 1114 | fread(recordmarker, 1, data->hdr->bintype.recordmarker, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'abinit_header': -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:1511:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 1511 | fread(skip, 1, 8, fp); - | ^~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c: In function 'GEO_read_next_timestep': -contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:619:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] - 619 | fscanf(data->file, "%*s %f %f %f", &x, &y, &z); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c:70: -contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: -contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] - 160 | static int get_pte_idx_from_string(const char *label) { - | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30: contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void put_element_ply(PlyFile*, void*)': contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable 'i' [-Wunused-variable] @@ -1937,7 +1973,6 @@ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1631:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 1631 | fread (str, len, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'void get_binary_item(FILE*, int, int*, unsigned int*, double*)': contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2057:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 2057 | fread (ptr, 1, 1, fp); @@ -1963,15 +1998,15 @@ contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:2099:13: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 2099 | fread (ptr, 8, 1, fp); | ~~~~~~^~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function 'int read_dsn6_data(void*, int, float*, float*)': -contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:233:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 233 | fread(brick, sizeof(char), 512, fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function 'void* open_dsn6_read(const char*, const char*, int*)': -contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:91:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 91 | fread(fileHeader, sizeof(short), 19, fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'char* recreate_command_line(int, char**)': +contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] + 1334 | line[0] = '\0'; + | ~~~~~~~~^~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by 'malloc' + 1333 | line = (char *) malloc (sizeof(char) * len); + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp: In function 'int read_mol2_timestep(void*, int, molfile_timestep_t*)': contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:275:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 275 | fgets(line, LINESIZE, mol2->file); @@ -2009,13 +2044,14 @@ contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp:92:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 92 | fgets(line, LINESIZE, fd); // Read the charge_type | ~~~~~^~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function 'char* recreate_command_line(int, char**)': -contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] - 1334 | line[0] = '\0'; - | ~~~~~~~~^~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by 'malloc' - 1333 | line = (char *) malloc (sizeof(char) * len); - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function 'int read_dsn6_data(void*, int, float*, float*)': +contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:233:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 233 | fread(brick, sizeof(char), 512, fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp: In function 'void* open_dsn6_read(const char*, const char*, int*)': +contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp:91:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 91 | fread(fileHeader, sizeof(short), 19, fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:49: @@ -2093,8 +2129,8 @@ contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c:326:7: warning: '__builtin_strncpy' output may be truncated copying 11 bytes from a string of length 1023 [-Wstringop-truncation] 326 | strncpy(data->atoms[i].type, atname, sizeof(data->atoms[i].type)); | ^ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c: In function 'get_atom_radius': contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c:166:16: warning: variable 'type' set but not used [-Wunused-but-set-variable] 166 | char *name, *type; @@ -2206,39 +2242,8 @@ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:437:18: warning: 'init_qmdata' defined but not used [-Wunused-function] 437 | static qmdata_t* init_qmdata() { | ^~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)': -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:91:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 91 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:116:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 116 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:132:9: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 132 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:149:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 149 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:155:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 155 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:161:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 161 | fgets(line, 80, infile); //one more read to keep us in sync - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:170:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 170 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:217:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 217 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:237:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 237 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:256:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 256 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp: In function 'int read_bgf_timestep(void*, int, molfile_timestep_t*)': contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:243:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 243 | fgets(line, LINESIZE, bgf->file); @@ -2270,9 +2275,41 @@ contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp:59:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 59 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)': +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:91:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 91 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:116:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 116 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:132:9: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 132 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:149:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 149 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:155:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 155 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:161:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 161 | fgets(line, 80, infile); //one more read to keep us in sync + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:170:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 170 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:217:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 217 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:237:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 237 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp:256:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 256 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c: In function 'read_next_timestep': contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:103:10: warning: variable 'numatoms' set but not used [-Wunused-but-set-variable] 103 | int i, numatoms; @@ -2285,8 +2322,15 @@ contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c:78:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 78 | fread(&filen, sizeof(namdbin_int32), 1, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c: In function 'open_binpos_read': +contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:64:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 64 | fread(magicchar,sizeof(char),4,fd); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:72:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 72 | fread(&igarb,sizeof(int),1,fd); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c: In function 'read_mmtk_cdf_structure': contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:730:15: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 730 | if (len > sizeof(name)) { @@ -2295,27 +2339,8 @@ contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c:1060:16: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1060 | for (i=0; i<(3 * mmtk->atom_numberdim); i++) { | ^ -contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c: In function 'open_binpos_read': -contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:64:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 64 | fread(magicchar,sizeof(char),4,fd); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c:72:3: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] - 72 | fread(&igarb,sizeof(int),1,fd); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c: In function 'open_rst_read': -contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:48:11: warning: variable 'timesteprst' set but not used [-Wunused-but-set-variable] - 48 | double timesteprst; - | ^~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:67:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 67 | fgets(title, 82, fd); - | ^~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:70:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 70 | fgets(line, 82, fd); - | ^~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp: In function 'int read_brix_data(void*, int, float*, float*)': contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:247:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 247 | fread(brick, sizeof(char), 512, fd); @@ -2347,14 +2372,19 @@ contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp:135:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 135 | fscanf(fd, " %s %f", keyWord, &sigma); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c: In function 'open_rst_read': +contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:48:11: warning: variable 'timesteprst' set but not used [-Wunused-but-set-variable] + 48 | double timesteprst; + | ^~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:67:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 67 | fgets(title, 82, fd); + | ^~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c:70:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 70 | fgets(line, 82, fd); + | ^~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/offplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/carplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/carplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -In file included from /usr/include/c++/12/map:60, - from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:58: -/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, {anonymous}::Blob>; _KeyOfValue = std::_Select1st, {anonymous}::Blob> >; _Compare = std::less >; _Alloc = std::allocator, {anonymous}::Blob> >]': -/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, {anonymous}::Blob>, std::_Select1st, {anonymous}::Blob> >, std::less >, std::allocator, {anonymous}::Blob> > >::const_iterator' changed in GCC 7.1 - 2209 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function 'read_car_timestep': contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:326:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 326 | fgets(line, LINESIZE, data->file); @@ -2397,10 +2427,6 @@ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:179:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 179 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, {anonymous}::Blob>; _KeyOfValue = std::_Select1st, {anonymous}::Blob> >; _Compare = std::less >; _Alloc = std::allocator, {anonymous}::Blob> >]': -/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, {anonymous}::Blob>, std::_Select1st, {anonymous}::Blob> >, std::less >, std::allocator, {anonymous}::Blob> > >::const_iterator' changed in GCC 7.1 - 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:182:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 182 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2425,16 +2451,6 @@ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:245:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 245 | fgets(line, LINESIZE, fd); | ^~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -In file included from /usr/include/c++/12/map:61: -/usr/include/c++/12/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = std::__cxx11::basic_string; _Tp = {anonymous}::Blob; _Compare = std::less >; _Alloc = std::allocator, {anonymous}::Blob> >]': -/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, {anonymous}::Blob>, std::_Select1st, {anonymous}::Blob> >, std::less >, std::allocator, {anonymous}::Blob> > >::const_iterator' changed in GCC 7.1 - 530 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 531 | std::forward_as_tuple(std::move(__k)), - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 532 | std::tuple<>()); - | ~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/carplugin.c: In function 'read_car_structure': contrib/uiuc/plugins/molfile_plugin/src/carplugin.c:127:29: warning: '%d' directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] 127 | sprintf(atom->resname, "%d", resid); @@ -2456,12 +2472,32 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp: In function 'int read_spider_data(void*, int, float*, float*)': -contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:286:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 286 | fread(datablock, total * sizeof(float), 1, fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/12/map:60, + from contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:58: +/usr/include/c++/12/bits/stl_tree.h: In member function 'std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(const_iterator, const key_type&) [with _Key = std::__cxx11::basic_string; _Val = std::pair, {anonymous}::Blob>; _KeyOfValue = std::_Select1st, {anonymous}::Blob> >; _Compare = std::less >; _Alloc = std::allocator, {anonymous}::Blob> >]': +/usr/include/c++/12/bits/stl_tree.h:2209:5: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, {anonymous}::Blob>, std::_Select1st, {anonymous}::Blob> >, std::less >, std::allocator, {anonymous}::Blob> > >::const_iterator' changed in GCC 7.1 + 2209 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, {anonymous}::Blob>; _KeyOfValue = std::_Select1st, {anonymous}::Blob> >; _Compare = std::less >; _Alloc = std::allocator, {anonymous}::Blob> >]': +/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, {anonymous}::Blob>, std::_Select1st, {anonymous}::Blob> >, std::less >, std::allocator, {anonymous}::Blob> > >::const_iterator' changed in GCC 7.1 + 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /usr/include/c++/12/map:61: +/usr/include/c++/12/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = std::__cxx11::basic_string; _Tp = {anonymous}::Blob; _Compare = std::less >; _Alloc = std::allocator, {anonymous}::Blob> >]': +/usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, {anonymous}::Blob>, std::_Select1st, {anonymous}::Blob> >, std::less >, std::allocator, {anonymous}::Blob> > >::const_iterator' changed in GCC 7.1 + 530 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 531 | std::forward_as_tuple(std::move(__k)), + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 532 | std::tuple<>()); + | ~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function 'void* open_ccp4_read(const char*, const char*, int*)': +contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:304:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 304 | fgets(symData, 81, fd); + | ~~~~~^~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp: In function 'int read_parm7_structure(void*, int*, molfile_atom_t*)': contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp:78:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 78 | fgets(buf, 85, file); @@ -2540,11 +2576,10 @@ contrib/uiuc/plugins/molfile_plugin/src/ReadPARM7.h:97:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(file, "%s\n", buf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp: In function 'void* open_ccp4_read(const char*, const char*, int*)': -contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp:304:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 304 | fgets(symData, 81, fd); - | ~~~~~^~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp: In function 'int read_spider_data(void*, int, float*, float*)': +contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp:286:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 286 | fread(datablock, total * sizeof(float), 1, fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'void DDmkdir(const std::string&, mode_t, int, int)': contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: '%03x' directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 714 | sprintf(sub, "%03x/", i); @@ -2580,29 +2615,7 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)': -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:96:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 96 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:104:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 104 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 119 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:131:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 131 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:153:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 153 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:162:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 162 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:171:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 171 | fgets(line, 80, infile); - | ~~~~~^~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function 'std::string framefile(const std::string&, size_t, size_t, int, int)': contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 675 | sprintf(answer, "%03x/", d1); @@ -2636,7 +2649,31 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp: In function 'int read_rawgraphics(void*, int*, const molfile_graphics_t**)': +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:96:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 96 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:104:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 104 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 119 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:131:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 131 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:153:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 153 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:162:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 162 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp:171:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 171 | fgets(line, 80, infile); + | ~~~~~^~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/corplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp:24: contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h: In member function 'int {anonymous}::ReadPARM::readparm(FILE*)': contrib/uiuc/plugins/molfile_plugin/src/ReadPARM.h:435:17: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -2701,11 +2738,12 @@ 103 | strncpy(atom->name, buffer, sizeof(atom->name)); | ^ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp: In function 'void* open_uhbd_read(const char*, const char*, int*)': contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp:102:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 102 | fread(&headersize, sizeof(int), 1, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/corplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/corplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c: In function 'read_vasp5xdatcar_timestep': contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c:224:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -2742,7 +2780,28 @@ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function 'void* open_cube_read(const char*, const char*, int*)': +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:175:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 175 | fgets(readbuf, 1023, cube->fd); // go on to next line + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:181:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 181 | fgets(readbuf, 1023, cube->fd); // skip second header line + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:326:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 326 | fgets(readbuf, 1023, cube->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:337:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 337 | fgets(readbuf, 1023, cube->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:339:11: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] + 339 | fscanf(cube->fd, "%d", &cube->nsets); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:344:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] + 344 | fscanf(cube->fd, "%d", &orb); + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:349:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 349 | fgets(readbuf, 1023, cube->fd); // gobble up rest of line + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c: In function 'read_vaspchgcar_data': contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c:237:60: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -2779,52 +2838,8 @@ contrib/uiuc/plugins/molfile_plugin/src/vaspplugin.h:111:13: warning: 'vasp_timestep_unitcell' defined but not used [-Wunused-function] 111 | static void vasp_timestep_unitcell(molfile_timestep_t *ts, vasp_plugindata_t *data) | ^~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp: In function 'void* open_cube_read(const char*, const char*, int*)': -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:175:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 175 | fgets(readbuf, 1023, cube->fd); // go on to next line - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:181:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 181 | fgets(readbuf, 1023, cube->fd); // skip second header line - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:326:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 326 | fgets(readbuf, 1023, cube->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:337:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 337 | fgets(readbuf, 1023, cube->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:339:11: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] - 339 | fscanf(cube->fd, "%d", &cube->nsets); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:344:13: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] - 344 | fscanf(cube->fd, "%d", &orb); - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp:349:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 349 | fgets(readbuf, 1023, cube->fd); // gobble up rest of line - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'read_vaspoutcar_timestep': -contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:239:7: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 239 | fgets(lineptr, LINESIZE, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:242:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 242 | fgets(lineptr, LINESIZE, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'read_vaspoutcar_structure': -contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:204:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 204 | fgets(lineptr, LINESIZE, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'open_vaspoutcar_read': -contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:87:10: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] - 87 | fgets(lineptr, LINESIZE, data->file); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:40: -contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: -contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] - 160 | static int get_pte_idx_from_string(const char *label) { - | ^~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:51: contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function 'fio_fread': contrib/uiuc/plugins/molfile_plugin/src/fastio.h:435:35: warning: format '%ld' expects argument of type 'long int', but argument 2 has type 'fio_size_t' {aka 'long long int'} [-Wformat=] @@ -2870,6 +2885,27 @@ | ~~~~~~ | | | fio_size_t {aka long long int} +contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'read_vaspoutcar_timestep': +contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:239:7: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 239 | fgets(lineptr, LINESIZE, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:242:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 242 | fgets(lineptr, LINESIZE, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'read_vaspoutcar_structure': +contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:204:9: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 204 | fgets(lineptr, LINESIZE, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c: In function 'open_vaspoutcar_read': +contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:87:10: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] + 87 | fgets(lineptr, LINESIZE, data->file); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c:40: +contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h: At top level: +contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] + 160 | static int get_pte_idx_from_string(const char *label) { + | ^~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c: In function 'read_dcdheader': contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:191:57: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 191 | } else if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic) { @@ -2896,7 +2932,6 @@ contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:546:16: warning: variable 'readlen' set but not used [-Wunused-but-set-variable] 546 | fio_size_t readlen; /* number of bytes actually read */ | ^~~~~~~ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c:60: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h: At top level: contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:96:13: warning: 'swap2_aligned' defined but not used [-Wunused-function] @@ -2914,8 +2949,9 @@ contrib/uiuc/plugins/molfile_plugin/src/fastio.h:459:19: warning: 'fio_readv' defined but not used [-Wunused-function] 459 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) { | ^~~~~~~~~ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c: In function 'read_vaspparchg_data': +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c:238:60: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 238 | for (n = 0; n < data->numatoms + data->version + 5; ++n) fgets(lineptr, LINESIZE, data->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2951,26 +2987,6 @@ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:133:12: warning: 'get_pte_idx' defined but not used [-Wunused-function] 133 | static int get_pte_idx(const char *label) | ^~~~~~~~~~~ -In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:31: -contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function 'read_next_timestep': -contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:119:3: warning: '__builtin_strncpy' output may be truncated copying 80 bytes from a string of length 82 [-Wstringop-truncation] - 119 | strncpy(tmp, record, PDB_RECORD_LENGTH); - | ^ -contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:144:5: warning: '__builtin_strncpy' output may be truncated copying 8 bytes from a string of length 52 [-Wstringop-truncation] - 144 | strncpy(numstr, record + 30, 8); - | ^ -contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:149:5: warning: '__builtin_strncpy' output may be truncated copying 8 bytes from a string of length 44 [-Wstringop-truncation] - 149 | strncpy(numstr+10, record + 38, 8); - | ^ -contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:154:5: warning: '__builtin_strncpy' output may be truncated copying 8 bytes from a string of length 36 [-Wstringop-truncation] - 154 | strncpy(numstr+20, record + 46, 8); - | ^ -contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:159:5: warning: '__builtin_strncpy' output may be truncated copying 6 bytes from a string of length 28 [-Wstringop-truncation] - 159 | strncpy(numstr+30, record + 54, 6); - | ^ -contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:164:5: warning: '__builtin_strncpy' output may be truncated copying 6 bytes from a string of length 22 [-Wstringop-truncation] - 164 | strncpy(numstr+40, record + 60, 6); - | ^ In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = std::__cxx11::basic_string; _Tp = {anonymous}::Blob; _Compare = std::less >; _Alloc = std::allocator, {anonymous}::Blob> >]', inlined from 'int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const' at contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1743:38: /usr/include/c++/12/bits/stl_map.h:530:44: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, {anonymous}::Blob>, std::_Select1st, {anonymous}::Blob> >, std::less >, std::allocator, {anonymous}::Blob> > >::const_iterator' changed in GCC 7.1 @@ -3000,6 +3016,26 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | std::tuple<>()); | ~~~~~~~~~~~~~~~ +In file included from contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c:31: +contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function 'read_next_timestep': +contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:119:3: warning: '__builtin_strncpy' output may be truncated copying 80 bytes from a string of length 82 [-Wstringop-truncation] + 119 | strncpy(tmp, record, PDB_RECORD_LENGTH); + | ^ +contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:144:5: warning: '__builtin_strncpy' output may be truncated copying 8 bytes from a string of length 52 [-Wstringop-truncation] + 144 | strncpy(numstr, record + 30, 8); + | ^ +contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:149:5: warning: '__builtin_strncpy' output may be truncated copying 8 bytes from a string of length 44 [-Wstringop-truncation] + 149 | strncpy(numstr+10, record + 38, 8); + | ^ +contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:154:5: warning: '__builtin_strncpy' output may be truncated copying 8 bytes from a string of length 36 [-Wstringop-truncation] + 154 | strncpy(numstr+20, record + 46, 8); + | ^ +contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:159:5: warning: '__builtin_strncpy' output may be truncated copying 6 bytes from a string of length 28 [-Wstringop-truncation] + 159 | strncpy(numstr+30, record + 54, 6); + | ^ +contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:164:5: warning: '__builtin_strncpy' output may be truncated copying 6 bytes from a string of length 22 [-Wstringop-truncation] + 164 | strncpy(numstr+40, record + 60, 6); + | ^ arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/readpdb.h: In function 'read_pdb_structure': contrib/uiuc/plugins/molfile_plugin/src/readpdb.h:299:3: warning: '__builtin_strncpy' output may be truncated copying 4 bytes from a string of length 70 [-Wstringop-truncation] @@ -3123,6 +3159,7 @@ contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable 'fd' [-Wunused-variable] 1409 | FILE* fd; | ^~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Field.cpp -o build/temp.linux-armhf-3.11/layer0/Field.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c: In function 'read_vaspxdatcar_timestep': contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c:283:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -3162,7 +3199,6 @@ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Field.cpp -o build/temp.linux-armhf-3.11/layer0/Field.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c: In function 'read_vaspxml_structure': contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c:139:7: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -3183,12 +3219,13 @@ contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] 160 | static int get_pte_idx_from_string(const char *label) { | ^~~~~~~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/ShaderPrg.cpp -o build/temp.linux-armhf-3.11/layer0/ShaderPrg.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function 'vtf_read_bonds': contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: '%s' directive argument is null [-Wformat-overflow=] 147 | sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n", | ^~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function 'vtf_open_file_read': contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:538:9: warning: '__builtin___strncat_chk' output may be truncated copying 200 bytes from a string of length 254 [-Wstringop-truncation] 538 | strncat(msg, keyword, 200); @@ -3196,7 +3233,7 @@ contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:629:7: warning: '__builtin___strncat_chk' output may be truncated copying 200 bytes from a string of length 254 [-Wstringop-truncation] 629 | strncat(msg, keyword, 200); | ^ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/ShaderPrg.cpp -o build/temp.linux-armhf-3.11/layer0/ShaderPrg.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp: In function 'int read_vtk_data_ex(void*, molfile_volumetric_readwrite_t*)': contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp:371:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -3207,6 +3244,7 @@ 306 | fscanf(fd, "%lf %lf %lf", &vx, &vy, &vz); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp: In function 'int read_xbgf_timestep(void*, int, molfile_timestep_t*)': contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:288:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 288 | fgets(line, LINESIZE, bgf->file); @@ -3238,9 +3276,6 @@ contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp:72:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 72 | fgets(line, LINESIZE, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp: In function 'int read_edm_data(void*, int, float*, float*)': contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:240:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 240 | fgets(readbuf, 13, edm->fd); @@ -3249,35 +3284,6 @@ contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp:44:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 44 | fgets(readbuf, 1024, fd); // go on to next line | ~~~~~^~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function 'void eatline(FILE*)': -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:238:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 238 | fgets(readbuf, 1024, fd); // go on to next line - | ~~~~~^~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function 'void* open_xsf_read(const char*, const char*, int*)': -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:408:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 408 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:442:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 442 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:444:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 444 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:446:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 446 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:448:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 448 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:450:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 450 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:473:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 473 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:508:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] - 508 | fgets(readbuf, 256, xsf->fd); - | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp: In function 'void* open_fs4_read(const char*, const char*, int*)': contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp:79:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -3285,6 +3291,7 @@ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/File.cpp -o build/temp.linux-armhf-3.11/layer0/File.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:160: contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'angular_momentum_expon': contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:545:14: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'unsigned int'} [-Wsign-compare] @@ -3302,7 +3309,6 @@ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:3573:8: warning: variable 'word' set but not used [-Wunused-but-set-variable] 3573 | char word[6][BUFSIZ]; | ^~~~ -arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'eatline': contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:840:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] 840 | fgets(readbuf, 1024, fd); @@ -3342,14 +3348,35 @@ contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:585:13: warning: 'print_matrix4' defined but not used [-Wunused-function] 585 | static void print_matrix4(const float mat[16]) { | ^~~~~~~~~~~~~ -In file included from contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:57: -contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] - 160 | static int get_pte_idx_from_string(const char *label) { - | ^~~~~~~~~~~~~~~~~~~~~~~ -contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c: In function 'read_xyz_structure': -contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:133:7: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] - 133 | strncpy(atom->name, buffer, sizeof(atom->name)); - | ^ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function 'void eatline(FILE*)': +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:238:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 238 | fgets(readbuf, 1024, fd); // go on to next line + | ~~~~~^~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp: In function 'void* open_xsf_read(const char*, const char*, int*)': +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:408:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 408 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:442:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 442 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:444:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 444 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:446:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 446 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:448:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 448 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:450:20: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 450 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:473:22: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 473 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp:508:16: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] + 508 | fgets(readbuf, 256, xsf->fd); + | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function 'read_gamess_rundata': contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:615:3: warning: '__builtin_strncpy' output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] 615 | strncpy(sys_data->basis_string, data->basis_string, @@ -3363,13 +3390,22 @@ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:622:3: warning: '__builtin_strncpy' output may be truncated copying 81 bytes from a string of length 8191 [-Wstringop-truncation] 622 | strncpy(sys_data->version_string, data->version_string, | ^ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Block.cpp -o build/temp.linux-armhf-3.11/layer0/Block.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function 'get_coordinates': contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1618:5: warning: '__builtin_strncpy' output may be truncated copying 11 bytes from a string of length 8191 [-Wstringop-truncation] 1618 | strncpy(atm->type, atname, sizeof(atm->type)); | ^ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Sphere.cpp -o build/temp.linux-armhf-3.11/layer0/Sphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +In file included from contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:57: +contrib/uiuc/plugins/molfile_plugin/src/periodic_table.h:160:12: warning: 'get_pte_idx_from_string' defined but not used [-Wunused-function] + 160 | static int get_pte_idx_from_string(const char *label) { + | ^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/GenericBuffer.cpp -o build/temp.linux-armhf-3.11/layer0/GenericBuffer.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c: In function 'read_xyz_structure': +contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c:133:7: warning: '__builtin_strncpy' output may be truncated copying 16 bytes from a string of length 1023 [-Wstringop-truncation] + 133 | strncpy(atom->name, buffer, sizeof(atom->name)); + | ^ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Block.cpp -o build/temp.linux-armhf-3.11/layer0/Block.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Sphere.cpp -o build/temp.linux-armhf-3.11/layer0/Sphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c: In function 'get_basis_options': contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1422:5: warning: '__builtin___strncat_chk' output may be truncated copying 1 byte from a string of length 9 [-Wstringop-truncation] 1422 | strncat(data->basis_string, &data->gbasis[3], 1); @@ -3398,12 +3434,13 @@ contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c:1272:5: warning: '__builtin_strncpy' specified bound 256 equals destination size [-Wstringop-truncation] 1272 | strncpy(data->memory,trimright(temp),sizeof(data->memory)); | ^ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/GraphicsUtil.cpp -o build/temp.linux-armhf-3.11/layer0/GraphicsUtil.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h: In function 'get_traj_frame.constprop': contrib/uiuc/plugins/molfile_plugin/src/qmplugin.h:819:5: warning: '__builtin_strncpy' output may be truncated copying 10 bytes from a string of length 10 [-Wstringop-truncation] 819 | strncpy((*atoms)[i].type, (*atoms)[indexmap[i]].type, 10); | ^ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/GraphicsUtil.cpp -o build/temp.linux-armhf-3.11/layer0/GraphicsUtil.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/ContourSurf.cpp -o build/temp.linux-armhf-3.11/layer0/ContourSurf.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Isosurf.cpp -o build/temp.linux-armhf-3.11/layer0/Isosurf.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp: In function 'void line3(FILE*, GRASSP*)': contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:186:8: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -3575,7 +3612,6 @@ contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp:398:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 398 | fread(properties, sizeof(float), 3 * nvert, infile); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Isosurf.cpp -o build/temp.linux-armhf-3.11/layer0/Isosurf.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp: In function 'void* open_grid_read(const char*, const char*, int*)': @@ -3583,16 +3619,15 @@ 84 | fread(&dataBegin, sizeof(int), 1, fd); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Crystal.cpp -o build/temp.linux-armhf-3.11/layer0/Crystal.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp:30: contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h: In function 'int mdio_readline(md_file*, char*, int, int)': contrib/uiuc/plugins/molfile_plugin/src/Gromacs.h:426:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 426 | fgets(buf, n, mf->f); | ~~~~~^~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Crystal.cpp -o build/temp.linux-armhf-3.11/layer0/Crystal.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Texture.cpp -o build/temp.linux-armhf-3.11/layer0/Texture.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/hash.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/hash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/inthash.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/inthash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Deferred.cpp -o build/temp.linux-armhf-3.11/layer0/Deferred.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c:79: contrib/uiuc/plugins/molfile_plugin/src/fastio.h: In function 'fio_fread': @@ -3653,25 +3688,25 @@ contrib/uiuc/plugins/molfile_plugin/src/fastio.h:459:19: warning: 'fio_readv' defined but not used [-Wunused-function] 459 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) { | ^~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Deferred.cpp -o build/temp.linux-armhf-3.11/layer0/Deferred.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Err.cpp -o build/temp.linux-armhf-3.11/layer0/Err.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Feedback.cpp -o build/temp.linux-armhf-3.11/layer0/Feedback.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Tracker.cpp -o build/temp.linux-armhf-3.11/layer0/Tracker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Map.cpp -o build/temp.linux-armhf-3.11/layer0/Map.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp -o build/temp.linux-armhf-3.11/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/CGO.cpp -o build/temp.linux-armhf-3.11/layer1/CGO.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Triangle.cpp -o build/temp.linux-armhf-3.11/layer0/Triangle.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/CGO.cpp -o build/temp.linux-armhf-3.11/layer1/CGO.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function 'int {anonymous}::write_structure(void*, int, const molfile_atom_t*)': contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable 'last_ctnumber' [-Wunused-variable] 1904 | int last_ctnumber = -1; | ^~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Map.cpp -o build/temp.linux-armhf-3.11/layer0/Map.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Match.cpp -o build/temp.linux-armhf-3.11/layer0/Match.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Matrix.cpp -o build/temp.linux-armhf-3.11/layer0/Matrix.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Util.cpp -o build/temp.linux-armhf-3.11/layer0/Util.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Util2.cpp -o build/temp.linux-armhf-3.11/layer0/Util2.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Vector.cpp -o build/temp.linux-armhf-3.11/layer0/Vector.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/MemoryDebug.cpp -o build/temp.linux-armhf-3.11/layer0/MemoryDebug.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/MemoryUsage.cpp -o build/temp.linux-armhf-3.11/layer0/MemoryUsage.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Ortho.cpp -o build/temp.linux-armhf-3.11/layer1/Ortho.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Vector.cpp -o build/temp.linux-armhf-3.11/layer0/Vector.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer0/MemoryUsage.cpp: In function 'size_t pymol::memory_usage()': layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); @@ -3680,22 +3715,24 @@ 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/MyPNG.cpp -o build/temp.linux-armhf-3.11/layer0/MyPNG.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Word.cpp -o build/temp.linux-armhf-3.11/layer0/Word.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Ortho.cpp -o build/temp.linux-armhf-3.11/layer1/Ortho.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Parse.cpp -o build/temp.linux-armhf-3.11/layer0/Parse.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Word.cpp -o build/temp.linux-armhf-3.11/layer0/Word.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/Pixmap.cpp -o build/temp.linux-armhf-3.11/layer0/Pixmap.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/ccealignmodule.cpp -o build/temp.linux-armhf-3.11/layer0/ccealignmodule.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/PostProcess.cpp -o build/temp.linux-armhf-3.11/layer0/PostProcess.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/ccealignmodule.cpp -o build/temp.linux-armhf-3.11/layer0/ccealignmodule.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/ShaderMgr.cpp -o build/temp.linux-armhf-3.11/layer0/ShaderMgr.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/P.cpp -o build/temp.linux-armhf-3.11/layer1/P.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/marching_cubes.cpp -o build/temp.linux-armhf-3.11/layer0/marching_cubes.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer0/os_gl.cpp -o build/temp.linux-armhf-3.11/layer0/os_gl.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Basis.cpp -o build/temp.linux-armhf-3.11/layer1/Basis.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/PConv.cpp -o build/temp.linux-armhf-3.11/layer1/PConv.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Picking.cpp -o build/temp.linux-armhf-3.11/layer1/Picking.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/ButMode.cpp -o build/temp.linux-armhf-3.11/layer1/ButMode.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Picking.cpp -o build/temp.linux-armhf-3.11/layer1/Picking.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Pop.cpp -o build/temp.linux-armhf-3.11/layer1/Pop.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/PyMOLObject.cpp -o build/temp.linux-armhf-3.11/layer1/PyMOLObject.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Setting.cpp -o build/temp.linux-armhf-3.11/layer1/Setting.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/PyMOLObject.cpp -o build/temp.linux-armhf-3.11/layer1/PyMOLObject.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/CifMoleculeReader.cpp -o build/temp.linux-armhf-3.11/layer2/CifMoleculeReader.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from /usr/include/c++/12/vector:70, from layer1/Picking.h:9, from layer0/Base.h:23, @@ -3712,8 +3749,14 @@ /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1287 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/CifMoleculeReader.cpp -o build/temp.linux-armhf-3.11/layer2/CifMoleculeReader.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Ray.cpp -o build/temp.linux-armhf-3.11/layer1/Ray.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/COLLADA.cpp -o build/temp.linux-armhf-3.11/layer1/COLLADA.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +In file included from /usr/include/c++/12/map:60, + from layer2/CifMoleculeReader.cpp:9: +/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': +/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 + 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ layer1/Ray.cpp: In function 'void RayRenderVRML2(CRay*, int, int, char**, float, float, float, float, float)': layer1/Ray.cpp:1535:20: warning: '%s' directive writing up to 1023 bytes into a region of size between 0 and 914 [-Wformat-overflow=] 1535 | "%s" @@ -3744,12 +3787,6 @@ | ~~~~~~~~~~~~~~~~~~ 1540 | vert2[2] - mid[2], axis[0], axis[1], axis[2], angle, geometry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /usr/include/c++/12/map:60, - from layer2/CifMoleculeReader.cpp:9: -/usr/include/c++/12/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = long long int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]': -/usr/include/c++/12/bits/stl_tree.h:2457:7: note: parameter passing for argument of type 'std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator' changed in GCC 7.1 - 2457 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/map:61: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](key_type&&) [with _Key = long long int; _Tp = res_bond_dict_t; _Compare = std::less; _Alloc = std::allocator >]', inlined from 'bond_dict_t::mapped_type& bond_dict_t::operator[](const char*)' at layer2/CifBondDict.h:103:74, @@ -3771,15 +3808,17 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 | std::tuple<>()); | ~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/COLLADA.cpp -o build/temp.linux-armhf-3.11/layer1/COLLADA.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Rep.cpp -o build/temp.linux-armhf-3.11/layer1/Rep.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Scene.cpp -o build/temp.linux-armhf-3.11/layer1/Scene.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Character.cpp -o build/temp.linux-armhf-3.11/layer1/Character.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/CoordSet.cpp -o build/temp.linux-armhf-3.11/layer2/CoordSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Color.cpp -o build/temp.linux-armhf-3.11/layer1/Color.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Rep.cpp -o build/temp.linux-armhf-3.11/layer1/Rep.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/CoordSet.cpp -o build/temp.linux-armhf-3.11/layer2/CoordSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Scene.cpp -o build/temp.linux-armhf-3.11/layer1/Scene.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/DistSet.cpp -o build/temp.linux-armhf-3.11/layer2/DistSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SceneMouse.cpp -o build/temp.linux-armhf-3.11/layer1/SceneMouse.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/GadgetSet.cpp -o build/temp.linux-armhf-3.11/layer2/GadgetSet.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Control.cpp -o build/temp.linux-armhf-3.11/layer1/Control.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SceneMouse.cpp -o build/temp.linux-armhf-3.11/layer1/SceneMouse.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/HydrogenAdder.cpp -o build/temp.linux-armhf-3.11/layer2/HydrogenAdder.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Extrude.cpp -o build/temp.linux-armhf-3.11/layer1/Extrude.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer1/SceneMouse.cpp: In function 'void SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, const NamedPicking&, int, bool)': layer1/SceneMouse.cpp:455:32: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=] 455 | " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G); @@ -3805,33 +3844,35 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/HydrogenAdder.cpp -o build/temp.linux-armhf-3.11/layer2/HydrogenAdder.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/ScenePicking.cpp -o build/temp.linux-armhf-3.11/layer1/ScenePicking.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/MmodTyping.cpp -o build/temp.linux-armhf-3.11/layer2/MmodTyping.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SceneRay.cpp -o build/temp.linux-armhf-3.11/layer1/SceneRay.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Control.cpp -o build/temp.linux-armhf-3.11/layer1/Control.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/ScenePicking.cpp -o build/temp.linux-armhf-3.11/layer1/ScenePicking.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/MmtfMoleculeReader.cpp -o build/temp.linux-armhf-3.11/layer2/MmtfMoleculeReader.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/Mol2Typing.cpp -o build/temp.linux-armhf-3.11/layer2/Mol2Typing.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Extrude.cpp -o build/temp.linux-armhf-3.11/layer1/Extrude.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/MolV3000.cpp -o build/temp.linux-armhf-3.11/layer2/MolV3000.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SceneRender.cpp -o build/temp.linux-armhf-3.11/layer1/SceneRender.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectAlignment.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectAlignment.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/ScrollBar.cpp -o build/temp.linux-armhf-3.11/layer1/ScrollBar.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Font.cpp -o build/temp.linux-armhf-3.11/layer1/Font.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/FontGLUT.cpp -o build/temp.linux-armhf-3.11/layer1/FontGLUT.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Seq.cpp -o build/temp.linux-armhf-3.11/layer1/Seq.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/Mol2Typing.cpp -o build/temp.linux-armhf-3.11/layer2/Mol2Typing.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SceneRay.cpp -o build/temp.linux-armhf-3.11/layer1/SceneRay.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/MolV3000.cpp -o build/temp.linux-armhf-3.11/layer2/MolV3000.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/FontGLUT8x13.cpp -o build/temp.linux-armhf-3.11/layer1/FontGLUT8x13.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectCGO.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectCGO.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/FontGLUT9x15.cpp -o build/temp.linux-armhf-3.11/layer1/FontGLUT9x15.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/FontGLUTHel10.cpp -o build/temp.linux-armhf-3.11/layer1/FontGLUTHel10.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/FontGLUTHel12.cpp -o build/temp.linux-armhf-3.11/layer1/FontGLUTHel12.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectAlignment.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectAlignment.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/FontGLUTHel18.cpp -o build/temp.linux-armhf-3.11/layer1/FontGLUTHel18.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectGroup.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectGroup.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/FontType.cpp -o build/temp.linux-armhf-3.11/layer1/FontType.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMap.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMap.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectCallback.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectCallback.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SceneRender.cpp -o build/temp.linux-armhf-3.11/layer1/SceneRender.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Movie.cpp -o build/temp.linux-armhf-3.11/layer1/Movie.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectCGO.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectCGO.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/ScrollBar.cpp -o build/temp.linux-armhf-3.11/layer1/ScrollBar.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Seq.cpp -o build/temp.linux-armhf-3.11/layer1/Seq.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectCallback.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectCallback.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectGroup.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectGroup.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepDot.cpp -o build/temp.linux-armhf-3.11/layer2/RepDot.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectDist.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectDist.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMap.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMap.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepEllipsoid.cpp -o build/temp.linux-armhf-3.11/layer2/RepEllipsoid.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectGadget.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectGadget.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepLabel.cpp -o build/temp.linux-armhf-3.11/layer2/RepLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Shaker.cpp -o build/temp.linux-armhf-3.11/layer1/Shaker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectMap.cpp: In function 'void ObjectMapDump(const ObjectMap*, const char*, int, int)': layer2/ObjectMap.cpp:5982:24: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=] 5982 | " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G); @@ -3849,10 +3890,7 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepDot.cpp -o build/temp.linux-armhf-3.11/layer2/RepDot.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectGadget.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectGadget.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Shaker.cpp -o build/temp.linux-armhf-3.11/layer1/Shaker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepEllipsoid.cpp -o build/temp.linux-armhf-3.11/layer2/RepEllipsoid.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectGadgetRamp.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectGadgetRamp.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SymOp.cpp -o build/temp.linux-armhf-3.11/layer1/SymOp.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer1/SymOp.cpp: In member function 'std::string pymol::SymOp::to_string() const': layer1/SymOp.cpp:37:32: warning: '%d' directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=] @@ -3879,7 +3917,10 @@ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SymOpPConv.cpp -o build/temp.linux-armhf-3.11/layer1/SymOpPConv.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectGadgetRamp.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectGadgetRamp.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SymOpTools.cpp -o build/temp.linux-armhf-3.11/layer1/SymOpTools.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepMesh.cpp -o build/temp.linux-armhf-3.11/layer2/RepMesh.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Symmetry.cpp -o build/temp.linux-armhf-3.11/layer1/Symmetry.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/VFont.cpp -o build/temp.linux-armhf-3.11/layer2/VFont.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectMap.cpp: In function 'ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)': layer2/ObjectMap.cpp:2961:22: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2961 | " PHIStrToMap: %s\n", cc ENDFB(I->G); @@ -3940,7 +3981,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/SymOpTools.cpp -o build/temp.linux-armhf-3.11/layer1/SymOpTools.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectMap.cpp: In function 'int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)': layer2/ObjectMap.cpp:4290:18: warning: '%s' directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4290 | " ObjectMap: %s\n", cc ENDFB(I->G); @@ -3967,13 +4007,13 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepLabel.cpp -o build/temp.linux-armhf-3.11/layer2/RepLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Symmetry.cpp -o build/temp.linux-armhf-3.11/layer1/Symmetry.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMesh.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMesh.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/VFont.cpp -o build/temp.linux-armhf-3.11/layer2/VFont.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Text.cpp -o build/temp.linux-armhf-3.11/layer1/Text.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/AtomIterators.cpp -o build/temp.linux-armhf-3.11/layer3/AtomIterators.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepMesh.cpp -o build/temp.linux-armhf-3.11/layer2/RepMesh.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepNonbonded.cpp -o build/temp.linux-armhf-3.11/layer2/RepNonbonded.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMesh.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMesh.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/CifDataValueFormatter.cpp -o build/temp.linux-armhf-3.11/layer3/CifDataValueFormatter.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/Editor.cpp -o build/temp.linux-armhf-3.11/layer3/Editor.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepNonbondedSphere.cpp -o build/temp.linux-armhf-3.11/layer2/RepNonbondedSphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectMesh.cpp: In member function 'virtual void ObjectMesh::update()': layer2/ObjectMesh.cpp:502:41: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=] 502 | "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", ms->MapName @@ -4006,10 +4046,7 @@ layer2/ObjectMesh.cpp:328:7: note: in expansion of macro 'PRINTFB' 328 | PRINTFB(I->G, FB_ObjectMesh, FB_Actions) | ^~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/CifDataValueFormatter.cpp -o build/temp.linux-armhf-3.11/layer3/CifDataValueFormatter.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/Editor.cpp -o build/temp.linux-armhf-3.11/layer3/Editor.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMolecule.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMolecule.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepNonbonded.cpp -o build/temp.linux-armhf-3.11/layer2/RepNonbonded.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepRibbon.cpp -o build/temp.linux-armhf-3.11/layer2/RepRibbon.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Editor.cpp: In function 'void EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)': layer3/Editor.cpp:1933:29: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] 1933 | " Editor: grabbing (%s).", name ENDFB(G); @@ -4023,6 +4060,7 @@ layer3/Editor.cpp:1932:7: note: in expansion of macro 'PRINTFB' 1932 | PRINTFB(G, FB_Editor, FB_Blather) | ^~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMolecule.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMolecule.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Editor.cpp: In function 'void EditorDefineExtraPks(PyMOLGlobals*)': layer3/Editor.cpp:335:29: warning: '%s' directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=] 335 | sprintf(buffer, "(byres %s)", name); @@ -4042,7 +4080,8 @@ layer3/Editor.cpp:339:12: note: 'sprintf' output between 12 and 267 bytes into a destination of size 256 339 | sprintf(buffer, "(byobject %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepNonbondedSphere.cpp -o build/temp.linux-armhf-3.11/layer2/RepNonbondedSphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/Executive.cpp -o build/temp.linux-armhf-3.11/layer3/Executive.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSphere.cpp -o build/temp.linux-armhf-3.11/layer2/RepSphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectMolecule.cpp: In function 'CoordSet* ObjectMoleculeMOLStr2CoordSet.constprop(PyMOLGlobals*, const char*, AtomInfoType**, const char**)': layer2/ObjectMolecule.cpp:7579:37: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=] 7579 | " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G) @@ -4055,8 +4094,8 @@ layer2/ObjectMolecule.cpp:7578:3: note: in expansion of macro 'PRINTFB' 7578 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/Executive.cpp -o build/temp.linux-armhf-3.11/layer3/Executive.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepRibbon.cpp -o build/temp.linux-armhf-3.11/layer2/RepRibbon.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSphereGenerate.cpp -o build/temp.linux-armhf-3.11/layer2/RepSphereGenerate.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSphereImmediate.cpp -o build/temp.linux-armhf-3.11/layer2/RepSphereImmediate.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectMolecule.cpp: In member function 'virtual void ObjectMolecule::update()': layer2/ObjectMolecule.cpp:10605:82: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=] 10605 | " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n", @@ -4081,10 +4120,7 @@ | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 10732 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSphere.cpp -o build/temp.linux-armhf-3.11/layer2/RepSphere.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/TypeFace.cpp -o build/temp.linux-armhf-3.11/layer1/TypeFace.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/View.cpp -o build/temp.linux-armhf-3.11/layer1/View.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSphereGenerate.cpp -o build/temp.linux-armhf-3.11/layer2/RepSphereGenerate.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)': layer3/Executive.cpp:9007:58: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=] 9007 | " Remove: eliminated %d atoms in model \"%s\".\n", @@ -4154,6 +4190,7 @@ layer3/Executive.cpp:11683:13: note: in expansion of macro 'PRINTF' 11683 | PRINTF | ^~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/View.cpp -o build/temp.linux-armhf-3.11/layer1/View.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'int ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, const char*, pymol::CObject*, int, int, int)': layer3/Executive.cpp:12226:30: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12226 | " Setting: %s set to %s in object \"%s\", state %d.\n", @@ -4189,8 +4226,7 @@ layer3/Executive.cpp:12197:11: note: in expansion of macro 'PRINTF' 12197 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSphereImmediate.cpp -o build/temp.linux-armhf-3.11/layer2/RepSphereImmediate.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Wizard.cpp -o build/temp.linux-armhf-3.11/layer1/Wizard.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSurface.cpp -o build/temp.linux-armhf-3.11/layer2/RepSurface.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'int ExecutiveSetSettingFromString(PyMOLGlobals*, int, const char*, const char*, int, int, int)': layer3/Executive.cpp:12129:36: warning: '%s' directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12129 | " Setting: %s set for %d atoms in object \"%s\".\n", @@ -4264,13 +4300,7 @@ layer3/Executive.cpp:12057:11: note: in expansion of macro 'PRINTF' 12057 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ -layer1/Wizard.cpp: In member function 'virtual int CWizard::release(int, int, int, int)': -layer1/Wizard.cpp:571:18: warning: unused variable 'wiz' [-Wunused-variable] - 571 | if (auto wiz = WizardGet(G)) { - | ^~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepSurface.cpp -o build/temp.linux-armhf-3.11/layer2/RepSurface.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMolecule2.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMolecule2.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/AssemblyHelpers.cpp -o build/temp.linux-armhf-3.11/layer2/AssemblyHelpers.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer1/Wizard.cpp -o build/temp.linux-armhf-3.11/layer1/Wizard.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'bool ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, const CSymmetry&, bool)': layer3/Executive.cpp:5951:43: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=] 5951 | " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G); @@ -4290,7 +4320,12 @@ layer3/Executive.cpp:5941:7: note: in expansion of macro 'PRINTFB' 5941 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/AtomInfo.cpp -o build/temp.linux-armhf-3.11/layer2/AtomInfo.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +layer1/Wizard.cpp: In member function 'virtual int CWizard::release(int, int, int, int)': +layer1/Wizard.cpp:571:18: warning: unused variable 'wiz' [-Wunused-variable] + 571 | if (auto wiz = WizardGet(G)) { + | ^~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/AssemblyHelpers.cpp -o build/temp.linux-armhf-3.11/layer2/AssemblyHelpers.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMolecule2.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMolecule2.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int, pymol::zstring_view)': layer3/Executive.cpp:9358:53: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=] 9358 | " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name @@ -4319,24 +4354,8 @@ layer3/Executive.cpp:9382:17: note: in expansion of macro 'PRINTFB' 9382 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ -layer2/ObjectMolecule2.cpp: In function 'int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)': -layer2/ObjectMolecule2.cpp:335:27: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] - 335 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", - | ^~ -In file included from /usr/include/stdio.h:906, - from /usr/include/python3.11/Python.h:24, - from layer0/os_python.h:34, - from layer2/ObjectMolecule2.cpp:24: -In function 'int snprintf(char*, size_t, const char*, ...)', - inlined from 'int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)' at layer2/ObjectMolecule2.cpp:334:7: -/usr/include/arm-linux-gnueabihf/bits/stdio2.h:54:35: note: '__builtin___snprintf_chk' output between 26 and 291 bytes into a destination of size 255 - 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, - | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 55 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 56 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/AtomInfoHistory.cpp -o build/temp.linux-armhf-3.11/layer2/AtomInfoHistory.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/AtomInfo.cpp -o build/temp.linux-armhf-3.11/layer2/AtomInfo.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepWireBond.cpp -o build/temp.linux-armhf-3.11/layer2/RepWireBond.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)': layer3/Executive.cpp:12338:68: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=] 12338 | " Setting: %s unset for %d atoms in object \"%s\".\n", @@ -4411,8 +4430,6 @@ | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 15472 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMolecule3.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMolecule3.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepWireBond.cpp -o build/temp.linux-armhf-3.11/layer2/RepWireBond.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'pymol::Result<> ExecutiveSetSetting(PyMOLGlobals*, int, PyObject*, pymol::zstring_view, int, int, int)': layer3/Executive.cpp:11877:70: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=] 11877 | " Setting: %s set for %d atoms in object \"%s\".\n", @@ -4493,7 +4510,25 @@ layer3/Executive.cpp:11744:11: note: in expansion of macro 'PRINTF' 11744 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectSlice.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectSlice.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +layer2/ObjectMolecule2.cpp: In function 'int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)': +layer2/ObjectMolecule2.cpp:335:27: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] + 335 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", + | ^~ +In file included from /usr/include/stdio.h:906, + from /usr/include/python3.11/Python.h:24, + from layer0/os_python.h:34, + from layer2/ObjectMolecule2.cpp:24: +In function 'int snprintf(char*, size_t, const char*, ...)', + inlined from 'int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)' at layer2/ObjectMolecule2.cpp:334:7: +/usr/include/arm-linux-gnueabihf/bits/stdio2.h:54:35: note: '__builtin___snprintf_chk' output between 26 and 291 bytes into a destination of size 255 + 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, + | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 55 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 56 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/AtomInfoHistory.cpp -o build/temp.linux-armhf-3.11/layer2/AtomInfoHistory.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/Sculpt.cpp -o build/temp.linux-armhf-3.11/layer2/Sculpt.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Executive.cpp: In function 'int ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)': layer3/Executive.cpp:2259:40: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 2259 | " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name @@ -4540,9 +4575,11 @@ layer3/Executive.cpp:5094:9: note: in expansion of macro 'PRINTFB' 5094 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectMolecule3.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectMolecule3.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectSlice.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectSlice.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/BondTypeHistory.cpp -o build/temp.linux-armhf-3.11/layer2/BondTypeHistory.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/Sculpt.cpp -o build/temp.linux-armhf-3.11/layer2/Sculpt.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/CifFile.cpp -o build/temp.linux-armhf-3.11/layer2/CifFile.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/SculptCache.cpp -o build/temp.linux-armhf-3.11/layer2/SculptCache.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectSlice.cpp: In member function 'virtual void ObjectSlice::update()': layer2/ObjectSlice.cpp:639:42: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=] 639 | "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName @@ -4565,8 +4602,11 @@ layer2/ObjectSlice.cpp:649:11: note: in expansion of macro 'PRINTFB' 649 | PRINTFB(I->G, FB_ObjectSlice, FB_Blather) | ^~~~~~~ +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/SideChainHelper.cpp -o build/temp.linux-armhf-3.11/layer2/SideChainHelper.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectSurface.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectSurface.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/SpecRecSpecial.cpp -o build/temp.linux-armhf-3.11/layer3/SpecRecSpecial.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/ExecutivePython.cpp -o build/temp.linux-armhf-3.11/layer3/ExecutivePython.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer4/Cmd.cpp -o build/temp.linux-armhf-3.11/layer4/Cmd.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectSurface.cpp: In function 'void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)': layer2/ObjectSurface.cpp:268:30: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 268 | " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G); @@ -4580,7 +4620,6 @@ layer2/ObjectSurface.cpp:267:7: note: in expansion of macro 'PRINTFB' 267 | PRINTFB(I->G, FB_ObjectSurface, FB_Actions) | ^~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/SculptCache.cpp -o build/temp.linux-armhf-3.11/layer2/SculptCache.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectSurface.cpp: In member function 'virtual void ObjectSurface::update()': layer2/ObjectSurface.cpp:493:43: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 493 | " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G); @@ -4591,10 +4630,8 @@ layer2/ObjectSurface.cpp:492:13: note: in expansion of macro 'PRINTFB' 492 | PRINTFB(I->G, FB_ObjectSurface, FB_Details) | ^~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/SideChainHelper.cpp -o build/temp.linux-armhf-3.11/layer2/SideChainHelper.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer4/Cmd.cpp -o build/temp.linux-armhf-3.11/layer4/Cmd.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/ObjectVolume.cpp -o build/temp.linux-armhf-3.11/layer2/ObjectVolume.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/ExecutivePython.cpp -o build/temp.linux-armhf-3.11/layer3/ExecutivePython.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/MaeExportHelpers.cpp -o build/temp.linux-armhf-3.11/layer3/MaeExportHelpers.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer2/ObjectVolume.cpp: In function 'ObjectMapState* ObjectVolumeStateGetMapState(ObjectVolumeState*)': layer2/ObjectVolume.cpp:74:33: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 74 | "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName @@ -4612,9 +4649,8 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/MaeExportHelpers.cpp -o build/temp.linux-armhf-3.11/layer3/MaeExportHelpers.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepAngle.cpp -o build/temp.linux-armhf-3.11/layer2/RepAngle.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/MoleculeExporter.cpp -o build/temp.linux-armhf-3.11/layer3/MoleculeExporter.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepAngle.cpp -o build/temp.linux-armhf-3.11/layer2/RepAngle.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepCartoon.cpp -o build/temp.linux-armhf-3.11/layer2/RepCartoon.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp In file included from /usr/include/c++/12/vector:70, from layer0/MemoryDebug.h:21, @@ -4630,16 +4666,15 @@ /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer4/Menu.cpp -o build/temp.linux-armhf-3.11/layer4/Menu.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/MovieScene.cpp -o build/temp.linux-armhf-3.11/layer3/MovieScene.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer4/Menu.cpp -o build/temp.linux-armhf-3.11/layer4/Menu.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer4/PopUp.cpp -o build/temp.linux-armhf-3.11/layer4/PopUp.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer5/PyMOL.cpp -o build/temp.linux-armhf-3.11/layer5/PyMOL.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepCylBond.cpp -o build/temp.linux-armhf-3.11/layer2/RepCylBond.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/PlugIOManager.cpp -o build/temp.linux-armhf-3.11/layer3/PlugIOManager.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer5/TestPyMOL.cpp -o build/temp.linux-armhf-3.11/layer5/TestPyMOL.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepDihedral.cpp -o build/temp.linux-armhf-3.11/layer2/RepDihedral.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/PlugIOManager.cpp -o build/temp.linux-armhf-3.11/layer3/PlugIOManager.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer5/main.cpp -o build/temp.linux-armhf-3.11/layer5/main.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepDistDash.cpp -o build/temp.linux-armhf-3.11/layer2/RepDistDash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/PlugIOManager.cpp: In function 'pymol::CObject* PlugIOManagerLoad(PyMOLGlobals*, pymol::CObject**, const char*, int, int, const char*, int)': layer3/PlugIOManager.cpp:946:65: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=] 946 | " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G); @@ -4657,17 +4692,18 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVContext.cpp -o build/temp.linux-armhf-3.11/ov/src/OVContext.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/RingFinder.cpp -o build/temp.linux-armhf-3.11/layer3/RingFinder.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepDistDash.cpp -o build/temp.linux-armhf-3.11/layer2/RepDistDash.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVContext.cpp -o build/temp.linux-armhf-3.11/ov/src/OVContext.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVHeap.cpp -o build/temp.linux-armhf-3.11/ov/src/OVHeap.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/Seeker.cpp -o build/temp.linux-armhf-3.11/layer3/Seeker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVHeapArray.cpp -o build/temp.linux-armhf-3.11/ov/src/OVHeapArray.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVLexicon.cpp -o build/temp.linux-armhf-3.11/ov/src/OVLexicon.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepDistLabel.cpp -o build/temp.linux-armhf-3.11/layer2/RepDistLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVOneToAny.cpp -o build/temp.linux-armhf-3.11/ov/src/OVOneToAny.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVOneToOne.cpp -o build/temp.linux-armhf-3.11/ov/src/OVOneToOne.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/OVRandom.cpp -o build/temp.linux-armhf-3.11/ov/src/OVRandom.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/Seeker.cpp -o build/temp.linux-armhf-3.11/layer3/Seeker.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD ov/src/ov_utility.cpp -o build/temp.linux-armhf-3.11/ov/src/ov_utility.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp +arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer2/RepDistLabel.cpp -o build/temp.linux-armhf-3.11/layer2/RepDistLabel.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-2.5.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -fPIC -D_PYMOL_LIBPNG -D_PYMOL_FREETYPE -DPYMOL_OPENMP -D_PYMOL_VMD_PLUGINS -D_HAVE_LIBXML -D_PYMOL_NO_MSGPACKC -D_PYMOL_NO_MAIN -D_PYMOL_NUMPY -Iinclude -Icontrib/uiuc/plugins/include -Iov/src -Ilayer0 -Ilayer1 -Ilayer2 -Ilayer3 -Ilayer4 -Ilayer5 -Ibuild/generated -Icontrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.11 -c -MMD layer3/Selector.cpp -o build/temp.linux-armhf-3.11/layer3/Selector.o -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp layer3/Selector.cpp: In function 'int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)': layer3/Selector.cpp:1722:70: warning: '%s' directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=] @@ -4730,422 +4766,422 @@ creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11 creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol2 -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol2 copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol2 -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/startup -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/startup -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/demo -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/demo -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol2 creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/constants_palette.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/parsing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/_cmd.cpython-311-arm-linux-gnueabihf.so -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/label.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/label.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/filter.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/save_shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/stereochemistry -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/vfont.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/Qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/save_shortcut.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fragments -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fragments -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fragments +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fragments +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/_champ.cpython-311-arm-linux-gnueabihf.so -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/solvate.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fast copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/fast/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fast -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mass.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/_champ.cpython-311-arm-linux-gnueabihf.so -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol2/cmd2.py to cmd2.cpython-311.pyc +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/startup +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/startup +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/demo +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/demo +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins +creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal +copying /build/reproducible-path/pymol-2.5.0+dfsg/.pybuild/cpython3_3.11_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol2/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/startup/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/volume.py to volume.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/Setting.py to Setting.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/Demo.py to Demo.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/editor.py to editor.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/importing.py to importing.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/helping.py to helping.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/cmd.py to cmd.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/managergui.py to managergui.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/repository.py to repository.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/installation.py to installation.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/experimenting.py to experimenting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol2/cmd2.py to cmd2.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/_gui.py to _gui.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/menu.py to menu.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/seqalign.py to seqalign.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/feedingback.py to feedingback.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/controlling.py to controlling.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/xray.py to xray.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/api.py to api.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/selector.py to selector.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/querying.py to querying.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/colorramping.py to colorramping.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/viewing.py to viewing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizarding.py to wizarding.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/commanding.py to commanding.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/util.py to util.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/keywords.py to keywords.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/seqalign.py to seqalign.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/internal.py to internal.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/locking.py to locking.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/constants_palette.py to constants_palette.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/parser.py to parser.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/creating.py to creating.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/checking.py to checking.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/gui.py to gui.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/parsing.py to parsing.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/shortcut.py to shortcut.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/exporting.py to exporting.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/mpeg_encode.py to mpeg_encode.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/charge.py to charge.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/gui.py to gui.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/invocation.py to invocation.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/__main__.py to __main__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/setting.py to setting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/controlling.py to controlling.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/keyboard.py to keyboard.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/selecting.py to selecting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/movie.py to movie.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/shortcut_dict.py to shortcut_dict.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/editor.py to editor.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/completing.py to completing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/selector.py to selector.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/headering.py to headering.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/preset.py to preset.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/feedingback.py to feedingback.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/computing.py to computing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/xwin.py to xwin.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/editing.py to editing.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/measurement.py to measurement.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/stereodemo.py to stereodemo.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/message.py to message.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/openvr.py to openvr.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/label.py to label.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/distance.py to distance.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/filter.py to filter.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/toggle.py to toggle.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/security.py to security.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/annotation.py to annotation.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/command.py to command.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/demo.py to demo.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/density.py to density.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/appearance.py to appearance.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/command.py to command.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/label.py to label.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/box.py to box.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/charge.py to charge.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/dragging.py to dragging.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/distance.py to distance.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/box.py to box.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/mutagenesis.py to mutagenesis.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/toggle.py to toggle.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/annotation.py to annotation.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/pair_fit.py to pair_fit.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/filter.py to filter.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/stereodemo.py to stereodemo.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/security.py to security.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/demo.py to demo.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/renaming.py to renaming.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/save_shortcut.py to save_shortcut.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/externing.py to externing.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/completing.py to completing.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/invocation.py to invocation.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/selecting.py to selecting.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/movie.py to movie.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/internal.py to internal.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/moving.py to moving.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/keyboard.py to keyboard.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/cgo.py to cgo.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/rpc.py to rpc.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/viewing.py to viewing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/openvr.py to openvr.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizard/message.py to message.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/experimenting.py to experimenting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/managergui.py to managergui.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/repository.py to repository.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/plugins/installation.py to installation.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/fitting.py to fitting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/creating.py to creating.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/callback.py to callback.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/constants.py to constants.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/mpeg_encode.py to mpeg_encode.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/pymolhttpd.py to pymolhttpd.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/helping.py to helping.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/diagnosing.py to diagnosing.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/lazyio.py to lazyio.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/fitting.py to fitting.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/colorprinting.py to colorprinting.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/stereochemistry/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/preset.py to preset.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/commanding.py to commanding.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/shortcut_manager.py to shortcut_manager.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/headering.py to headering.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/monitoring.py to monitoring.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/pymolhttpd.py to pymolhttpd.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/xwin.py to xwin.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/shortcut_dict.py to shortcut_dict.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/constants.py to constants.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/povray.py to povray.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/cmd.py to cmd.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/vfont.py to vfont.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/colorramping.py to colorramping.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/util.py to util.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/morphing.py to morphing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/menu.py to menu.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/cgo.py to cgo.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/shortcut_manager.py to shortcut_manager.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/Qt/utils.py to utils.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/Qt/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/computing.py to computing.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/wizarding.py to wizarding.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/callback.py to callback.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/editing.py to editing.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/keywords.py to keywords.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/__main__.py to __main__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/locking.py to locking.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/povray.py to povray.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/setting.py to setting.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/hetatm.py to hetatm.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/charge.py to charge.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/dictdb.py to dictdb.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fragments/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mol2.py to mol2.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/place.py to place.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_residues.py to protein_residues.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/brick.py to brick.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/xyz.py to xyz.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmd.py to mmd.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/cif.py to cif.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/water_amber.py to water_amber.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/checking.py to checking.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/shortcut.py to shortcut.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/parser.py to parser.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/xray.py to xray.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/morphing.py to morphing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/exporting.py to exporting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/api.py to api.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/save_shortcut.py to save_shortcut.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/colorprinting.py to colorprinting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/importing.py to importing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/moving.py to moving.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/monitoring.py to monitoring.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/externing.py to externing.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol/rpc.py to rpc.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/volume.py to volume.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/builder.py to builder.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/python.py to python.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/shortcut_menu_gui.py to shortcut_menu_gui.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker/realtime.py to realtime.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker/state.py to state.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker/amber.py to amber.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker/keyword.py to keyword.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker/state.py to state.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/tinker/amber.py to amber.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/water_residues.py to water_residues.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_amber.py to protein_amber.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/cpv.py to cpv.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fragments/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/place.py to place.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/neighbor.py to neighbor.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/sdf.py to sdf.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bond_amber.py to bond_amber.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/amber99.py to amber99.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/assign.py to assign.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf/io.py to io.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/charge.py to charge.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein.py to protein.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/water_amber.py to water_amber.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/lst.py to lst.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/cif.py to cif.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mol.py to mol.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/pkl.py to pkl.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/dictdb.py to dictdb.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/cc1.py to cc1.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mae.py to mae.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin/realtime.py to realtime.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin/state.py to state.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin/util.py to util.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin/commands.py to commands.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin/state.py to state.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein.py to protein.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/sdf.py to sdf.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bmin/commands.py to commands.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/brick.py to brick.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/hetatm.py to hetatm.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/solvate.py to solvate.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/cpv.py to cpv.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/models.py to models.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/gms.py to gms.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/gamess1.py to gamess1.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fast/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mol2.py to mol2.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bonds.py to bonds.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mol.py to mol.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/fast/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/xyz.py to xyz.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/models.py to models.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/map.py to map.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/neighbor.py to neighbor.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_amber.py to protein_amber.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bond_amber.py to bond_amber.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/pkl.py to pkl.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/io.py to io.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmd.py to mmd.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/arc.py to arc.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/gamess1.py to gamess1.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/protein_residues.py to protein_residues.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/gms.py to gms.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/pdb.py to pdb.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mmtf/io.py to io.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/water_residues.py to water_residues.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mass.py to mass.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/mae.py to mae.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/amber99.py to amber99.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/assign.py to assign.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/champ/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/arc.py to arc.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/io.py to io.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/chempy/lst.py to lst.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/shortcut_menu_gui.py to shortcut_menu_gui.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/syntax/python.py to python.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/builder.py to builder.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/volume.py to volume.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/__init__.py to __init__.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-311.pyc -byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/startup/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/volume.py to volume.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/Setting.py to Setting.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/Demo.py to Demo.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-311.pyc +byte-compiling /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-311.pyc running install_egg_info Writing /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/lib/python3.11/dist-packages/pymol-2.5.0.egg-info creating /build/reproducible-path/pymol-2.5.0+dfsg/debian/python3-pymol/usr/bin @@ -5251,10 +5287,10 @@ dpkg-gencontrol: warning: Depends field of package pymol: substitution variable ${python3:Depends} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild +dpkg-deb: building package 'pymol-data' in '../pymol-data_2.5.0+dfsg-1_all.deb'. +dpkg-deb: building package 'python3-pymol' in '../python3-pymol_2.5.0+dfsg-1_armhf.deb'. dpkg-deb: building package 'pymol' in '../pymol_2.5.0+dfsg-1_all.deb'. dpkg-deb: building package 'python3-pymol-dbgsym' in '../python3-pymol-dbgsym_2.5.0+dfsg-1_armhf.deb'. -dpkg-deb: building package 'python3-pymol' in '../python3-pymol_2.5.0+dfsg-1_armhf.deb'. -dpkg-deb: building package 'pymol-data' in '../pymol-data_2.5.0+dfsg-1_all.deb'. dpkg-genbuildinfo --build=binary -O../pymol_2.5.0+dfsg-1_armhf.buildinfo dpkg-genchanges --build=binary -O../pymol_2.5.0+dfsg-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -5262,12 +5298,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/27085/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/10651 and its subdirectories -I: Current time: Thu Jan 11 21:58:23 -12 2024 -I: pbuilder-time-stamp: 1705053503 +I: removing directory /srv/workspace/pbuilder/27085 and its subdirectories +I: Current time: Sat Jan 13 00:29:02 +14 2024 +I: pbuilder-time-stamp: 1705055342