Diff of the two buildlogs: -- --- b1/build.log 2024-01-08 13:12:42.102333786 +0000 +++ b2/build.log 2024-01-08 16:20:12.508411304 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Feb 9 05:32:45 -12 2025 -I: pbuilder-time-stamp: 1739122365 +I: Current time: Tue Jan 9 03:12:51 +14 2024 +I: pbuilder-time-stamp: 1704719571 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,7 +17,7 @@ I: copying [./apbs_3.0.0+dfsg1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.n683Lg88/trustedkeys.kbx': General error +gpgv: keyblock resource '/tmp/dpkg-verify-sig.A5lV98QD/trustedkeys.kbx': General error gpgv: Signature made Thu Jul 23 10:20:29 2020 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key @@ -35,49 +35,80 @@ dpkg-source: info: applying link_libapbs_routines.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1235975/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 8 13:13 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='a7231fcd966a4b629598c9c458c3391b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1235975' - PS1='# ' - PS2='> ' + INVOCATION_ID=ed3309c3f0cf4bff820210d33ae779e3 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=854233 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vPWgae5w/pbuilderrc_T5Is --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vPWgae5w/b1 --logfile b1/build.log apbs_3.0.0+dfsg1-3.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://85.184.249.68:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vPWgae5w/pbuilderrc_WmZP --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vPWgae5w/b2 --logfile b2/build.log apbs_3.0.0+dfsg1-3.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://78.137.99.97:3128 I: uname -a - Linux ionos15-amd64 6.5.0-0.deb12.4-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.5.10-1~bpo12+1 (2023-11-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-17-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash @@ -137,7 +168,7 @@ -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Feb 8 15:47 sh -> dash + lrwxrwxrwx 1 root root 9 Jan 8 13:13 sh -> /bin/bash -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty -rwsr-xr-x 1 root root 71912 Jan 20 2022 su @@ -163,7 +194,7 @@ -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew -I: user script /srv/workspace/pbuilder/1235975/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -349,7 +380,7 @@ Get: 130 http://deb.debian.org/debian bullseye/main amd64 python3-setuptools all 52.0.0-4 [366 kB] Get: 131 http://deb.debian.org/debian bullseye/main amd64 swig4.0 amd64 4.0.2-1 [1377 kB] Get: 132 http://deb.debian.org/debian bullseye/main amd64 swig all 4.0.2-1 [330 kB] -Fetched 67.9 MB in 1s (69.8 MB/s) +Fetched 67.9 MB in 3s (20.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17743 files and directories currently installed.) @@ -775,8 +806,8 @@ Setting up tzdata (2021a-1+deb11u10) ... Current default time zone: 'Etc/UTC' -Local time is now: Sun Feb 9 17:33:19 UTC 2025. -Universal Time is now: Sun Feb 9 17:33:19 UTC 2025. +Local time is now: Mon Jan 8 13:14:12 UTC 2024. +Universal Time is now: Mon Jan 8 13:14:12 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20180224.1+nmu1) ... @@ -910,7 +941,11 @@ fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/apbs-3.0.0+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../apbs_3.0.0+dfsg1-3_source.changes +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/apbs-3.0.0+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../apbs_3.0.0+dfsg1-3_source.changes dpkg-buildpackage: info: source package apbs dpkg-buildpackage: info: source version 3.0.0+dfsg1-3 dpkg-buildpackage: info: source distribution unstable @@ -1054,116 +1089,116 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1' dh_auto_build --sourcedir=apbs - cd obj-x86_64-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/apbs-3.0.0+dfsg1/apbs -B/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/depend -make -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/depend -make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/depend cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/DependInfo.cmake --color= +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/depend.internal". make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake --color= -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". +Scanning dependencies of target apbs_pmgc +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc/CMakeFiles/apbs_pmgc.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic/CMakeFiles/apbs_generic.dir/depend.internal". -Scanning dependencies of target apbslib_swig_compilation -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/build -Scanning dependencies of target apbs_generic make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Scanning dependencies of target apbs_pmgc +Scanning dependencies of target apbs_generic +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/apbslib_swig_compilation.dir/depend.internal". make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make -f src/generic/CMakeFiles/apbs_generic.dir/build.make src/generic/CMakeFiles/apbs_generic.dir/build +Scanning dependencies of target apbslib_swig_compilation make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f src/pmgc/CMakeFiles/apbs_pmgc.dir/build.make src/pmgc/CMakeFiles/apbs_pmgc.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/python/CMakeFiles/apbslib_swig_compilation.dir/build.make tools/python/CMakeFiles/apbslib_swig_compilation.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 1%] Swig compile apbslib.i for python -[ 2%] Building C object src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o +[ 1%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o +[ 2%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildAd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildAd.c [ 3%] Building C object src/generic/CMakeFiles/apbs_generic.dir/nosh.c.o -[ 4%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildAd.c.o -[ 5%] Building C object src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildBd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildBd.c cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/nosh.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/nosh.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E make_directory /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir +[ 4%] Building C object src/generic/CMakeFiles/apbs_generic.dir/mgparm.c.o +[ 6%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o +[ 6%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildGd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildGd.c +[ 8%] Swig compile apbslib.i for python +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildPd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildPd.c cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/mgparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/mgparm.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildAd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildAd.c -[ 6%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildBd.c.o +[ 9%] Building C object src/generic/CMakeFiles/apbs_generic.dir/femparm.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E make_directory /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/femparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/femparm.c -[ 8%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o -[ 9%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildPd.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E touch /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON.stamp -[ 10%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/buildGd.c.o +[ 10%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/cgd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/cgd.c +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig4.0 /usr/bin/swig4.0 -python -outdir /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python -interface _apbslib -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -I/usr/include/python3.9 -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python -o /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python/apbslib.i [ 11%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbamparm.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildBd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildBd.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/pbsamparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/pbsamparm.c -[ 12%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o +[ 12%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o +[ 13%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbsamparm.c.o +[ 15%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o +[ 16%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/gsd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/gsd.c cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/pbamparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/pbamparm.c +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/pbsamparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/pbsamparm.c +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/matvecd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/matvecd.c +[ 17%] Building C object src/generic/CMakeFiles/apbs_generic.dir/pbeparm.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mgcsd.c cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/pbeparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/pbeparm.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildGd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildGd.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/buildPd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/buildPd.c -[ 13%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/cgd.c.o -[ 15%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/gsd.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cmake -E env SWIG_LIB=/usr/share/swig4.0 /usr/bin/swig4.0 -python -outdir /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python -interface _apbslib -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -I/usr/include/python3.9 -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python -o /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python/apbslib.i -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/cgd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/cgd.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/gsd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/gsd.c -[ 16%] Building C object src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o -[ 17%] Building C object src/generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/geoflowparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/geoflowparm.c -[ 18%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/matvecd.c.o +[ 18%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mgdrvd.c +[ 19%] Building C object src/generic/CMakeFiles/apbs_generic.dir/bemparm.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/bemparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/bemparm.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/matvecd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/matvecd.c -[ 19%] Building C object src/generic/CMakeFiles/apbs_generic.dir/apolparm.c.o +[ 20%] Building C object src/generic/CMakeFiles/apbs_generic.dir/geoflowparm.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/geoflowparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/geoflowparm.c +[ 22%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o +[ 23%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mgsubd.c +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mikpckd.c +[ 24%] Building C object src/generic/CMakeFiles/apbs_generic.dir/apolparm.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/apolparm.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/apolparm.c -[ 20%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgcsd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mgcsd.c -[ 22%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o +[ 25%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vacc.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vacc.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vacc.c -[ 23%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgdrvd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mgdrvd.c -[ 24%] Building C object src/generic/CMakeFiles/apbs_generic.dir/valist.c.o +[ 26%] Building C object src/generic/CMakeFiles/apbs_generic.dir/valist.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/valist.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/valist.c -[ 25%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vatom.c.o +[ 27%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vatom.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vatom.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vatom.c -[ 26%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgsubd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mgsubd.c -[ 27%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mikpckd.c.o [ 29%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vpbe.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mikpckd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mikpckd.c cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vpbe.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vpbe.c -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 30%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vcap.c.o +[ 30%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mlinpckd.c +[ 31%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vcap.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vcap.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vcap.c -[ 31%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vclist.c.o -[ 32%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vstring.c.o +[ 32%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vclist.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vclist.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vclist.c -[ 32%] Built target apbslib_swig_compilation +[ 33%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vstring.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vstring.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vstring.c -[ 33%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -[ 34%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mlinpckd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mlinpckd.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mypdec.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mypdec.c -[ 36%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vparam.c.o +[ 34%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vparam.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vparam.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vparam.c -[ 37%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/newtond.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/newtond.c -[ 38%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +[ 36%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mypdec.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mypdec.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mypdec.c +[ 36%] Built target apbslib_swig_compilation +[ 37%] Building C object src/generic/CMakeFiles/apbs_generic.dir/vgreen.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cc -Dapbs_generic_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_generic.dir/vgreen.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/generic/vgreen.c +[ 38%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newtond.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/newtond.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/newtond.c [ 39%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/newdrvd.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/newdrvd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/newdrvd.c [ 40%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/powerd.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/powerd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/powerd.c [ 41%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/smoothd.c.o -[ 43%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/smoothd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/smoothd.c +[ 43%] Building C object src/pmgc/CMakeFiles/apbs_pmgc.dir/mgfasd.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/pmgc && /usr/bin/cc -Dapbs_pmgc_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_pmgc.dir/mgfasd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/pmgc/mgfasd.c [ 44%] Linking C shared library ../../lib/libapbs_generic.so cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/generic && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_generic.dir/link.txt --verbose=1 @@ -1187,14 +1222,14 @@ make -f src/mg/CMakeFiles/apbs_mg.dir/build.make src/mg/CMakeFiles/apbs_mg.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' [ 46%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vgrid.c.o -[ 47%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o -[ 48%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o -[ 50%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o -[ 51%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vgrid.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/mg/vgrid.c +[ 47%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vmgrid.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vmgrid.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/mg/vmgrid.c +[ 48%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vopot.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vopot.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/mg/vopot.c +[ 50%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmg.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vpmg.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/mg/vpmg.c +[ 51%] Building C object src/mg/CMakeFiles/apbs_mg.dir/vpmgp.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/mg && /usr/bin/cc -Dapbs_mg_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_mg.dir/vpmgp.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/mg/vpmgp.c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/mg/vgrid.c: In function 'Vgrid_readDXBIN': /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/mg/vgrid.c:853:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result] @@ -1207,180 +1242,167 @@ make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' [ 52%] Built target apbs_mg make -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/depend -make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend -make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/depend -make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/depend -make -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/depend cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/DependInfo.cmake --color= make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/depend -make -f tools/mesh/CMakeFiles/dxmath.dir/build.make tools/mesh/CMakeFiles/dxmath.dir/depend +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend.internal". make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/dxmath.dir/build.make tools/mesh/CMakeFiles/dxmath.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/DependInfo.cmake --color= +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/depend.internal". make -f tools/mesh/CMakeFiles/mergedx2.dir/build.make tools/mesh/CMakeFiles/mergedx2.dir/depend -make -f tools/mesh/CMakeFiles/benchmark.dir/build.make tools/mesh/CMakeFiles/benchmark.dir/depend +Scanning dependencies of target uhbd_asc2bin +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/depend.internal". +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/depend.internal". make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/DependInfo.cmake --color= -make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/depend -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/DependInfo.cmake --color= -make -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/depend -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake --color= -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/uhbd_asc2bin.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs_routines.dir/depend.internal". +make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mgmesh.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/tensor2dx.dir/depend.internal". -Scanning dependencies of target uhbd_asc2bin -make -f tools/mesh/CMakeFiles/multivalue.dir/build.make tools/mesh/CMakeFiles/multivalue.dir/depend -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/depend.internal". -Scanning dependencies of target mgmesh +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/depend.internal". make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/DependInfo.cmake --color= -Scanning dependencies of target mergedx +Scanning dependencies of target tensor2dx Scanning dependencies of target apbs_routines +Scanning dependencies of target mergedx +make -f tools/mesh/CMakeFiles/benchmark.dir/build.make tools/mesh/CMakeFiles/benchmark.dir/depend make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Scanning dependencies of target tensor2dx +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/smooth.dir/depend.internal". make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/depend.internal". -make -f tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build.make tools/mesh/CMakeFiles/uhbd_asc2bin.dir/build -make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/build -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake --color= +Scanning dependencies of target del2dx +Scanning dependencies of target mgmesh +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/DependInfo.cmake --color= make -f src/CMakeFiles/apbs_routines.dir/build.make src/CMakeFiles/apbs_routines.dir/build +Scanning dependencies of target smooth make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/depend.internal". +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dxmath.dir/depend.internal". make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/build -Scanning dependencies of target smooth +make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/build +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/mergedx2.dir/depend.internal". +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/mesh/CMakeFiles/mgmesh.dir/build.make tools/mesh/CMakeFiles/mgmesh.dir/build Scanning dependencies of target dxmath -make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/depend make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/del2dx.dir/depend.internal". -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' Scanning dependencies of target mergedx2 -make -f tools/mesh/CMakeFiles/tensor2dx.dir/build.make tools/mesh/CMakeFiles/tensor2dx.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/mesh/CMakeFiles/mergedx.dir/build.make tools/mesh/CMakeFiles/mergedx.dir/build +[ 53%] Building C object tools/mesh/CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/benchmark.dir/depend.internal". +make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/analysis.dir/build.make tools/mesh/CMakeFiles/analysis.dir/depend -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/build -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/DependInfo.cmake --color= -Scanning dependencies of target dx2mol -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Scanning dependencies of target del2dx Scanning dependencies of target benchmark -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/depend.internal". -make -f tools/mesh/CMakeFiles/del2dx.dir/build.make tools/mesh/CMakeFiles/del2dx.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +[ 54%] Building C object src/CMakeFiles/apbs_routines.dir/routines.c.o +make -f tools/mesh/CMakeFiles/smooth.dir/build.make tools/mesh/CMakeFiles/smooth.dir/build make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/depend.internal". -[ 53%] Building C object src/CMakeFiles/apbs_routines.dir/routines.c.o -[ 54%] Building C object tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o -Scanning dependencies of target multivalue +[ 55%] Building C object tools/mesh/CMakeFiles/tensor2dx.dir/tensor2dx.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/tensor2dx.dir/tensor2dx.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c +[ 56%] Building C object tools/mesh/CMakeFiles/mgmesh.dir/mgmesh.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src && /usr/bin/cc -Dapbs_routines_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/apbs_routines.dir/routines.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/routines.c -[ 55%] Building C object tools/mesh/CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/depend.internal". -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/mgmesh.dir/mgmesh.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/mgmesh.c +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/dxmath.dir/build.make tools/mesh/CMakeFiles/dxmath.dir/build -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/mergedx2.dir/build.make tools/mesh/CMakeFiles/mergedx2.dir/build -Scanning dependencies of target value make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/mgmesh.dir/mgmesh.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/mgmesh.c +make -f tools/mesh/CMakeFiles/mergedx2.dir/build.make tools/mesh/CMakeFiles/mergedx2.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/benchmark.dir/build.make tools/mesh/CMakeFiles/benchmark.dir/build -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c -[ 56%] Building C object tools/mesh/CMakeFiles/mergedx.dir/mergedx.c.o make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/build +make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/depend +[ 58%] Building C object tools/mesh/CMakeFiles/mergedx.dir/mergedx.c.o +[ 59%] Building C object tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/mergedx.dir/mergedx.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/mergedx.c +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/del2dx.dir/del2dx.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/del2dx.c +[ 60%] Building C object tools/mesh/CMakeFiles/smooth.dir/smooth.c.o +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/depend +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake --color= +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/multivalue.dir/build.make tools/mesh/CMakeFiles/multivalue.dir/depend +[ 61%] Building C object tools/mesh/CMakeFiles/mergedx2.dir/mergedx2.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/mergedx2.dir/mergedx2.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/mergedx2.c +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake --color= +make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/depend +[ 62%] Building C object tools/mesh/CMakeFiles/dxmath.dir/dxmath.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/smooth.dir/smooth.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/smooth.c +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/dxmath.dir/dxmath.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/dxmath.c +make -f tools/mesh/CMakeFiles/analysis.dir/build.make tools/mesh/CMakeFiles/analysis.dir/depend +[ 63%] Building C object tools/mesh/CMakeFiles/benchmark.dir/benchmark.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/DependInfo.cmake --color= +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/benchmark.dir/benchmark.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/benchmark.c +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/DependInfo.cmake --color= +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2mol.dir/depend.internal". +Scanning dependencies of target dx2mol make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/build -Scanning dependencies of target similarity +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/value.dir/depend.internal". +make -f tools/mesh/CMakeFiles/dx2mol.dir/build.make tools/mesh/CMakeFiles/dx2mol.dir/build +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/multivalue.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/analysis.dir/depend.internal". -[ 58%] Building C object tools/mesh/CMakeFiles/tensor2dx.dir/tensor2dx.c.o make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/tensor2dx.dir/tensor2dx.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c +Scanning dependencies of target multivalue +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/depend.internal". +Scanning dependencies of target value make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make -f tools/mesh/CMakeFiles/multivalue.dir/build.make tools/mesh/CMakeFiles/multivalue.dir/build -[ 59%] Building C object tools/mesh/CMakeFiles/smooth.dir/smooth.c.o -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -Scanning dependencies of target analysis -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/smooth.dir/smooth.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/smooth.c +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/similarity.dir/depend.internal". make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 60%] Building C object tools/mesh/CMakeFiles/dxmath.dir/dxmath.c.o -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/build -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/dxmath.dir/dxmath.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/dxmath.c -[ 61%] Building C object tools/mesh/CMakeFiles/del2dx.dir/del2dx.c.o -[ 62%] Building C object tools/mesh/CMakeFiles/mergedx2.dir/mergedx2.c.o +Scanning dependencies of target analysis make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/mesh/CMakeFiles/value.dir/build.make tools/mesh/CMakeFiles/value.dir/build make -f tools/mesh/CMakeFiles/analysis.dir/build.make tools/mesh/CMakeFiles/analysis.dir/build -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/del2dx.dir/del2dx.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/del2dx.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/mergedx2.dir/mergedx2.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/mergedx2.c -[ 63%] Building C object tools/mesh/CMakeFiles/benchmark.dir/benchmark.c.o +Scanning dependencies of target similarity +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' [ 65%] Building C object tools/mesh/CMakeFiles/dx2mol.dir/dx2mol.c.o -[ 66%] Building C object tools/mesh/CMakeFiles/value.dir/value.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/value.dir/value.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/value.c cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/dx2mol.dir/dx2mol.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/dx2mol.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/benchmark.dir/benchmark.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/benchmark.c -make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/depend -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/mesh/CMakeFiles/similarity.dir/build.make tools/mesh/CMakeFiles/similarity.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake --color= -[ 67%] Building C object tools/mesh/CMakeFiles/similarity.dir/similarity.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/similarity.dir/similarity.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/similarity.c -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/depend.internal". -[ 68%] Building C object tools/mesh/CMakeFiles/multivalue.dir/multivalue.c.o -Scanning dependencies of target dx2uhbd -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/build +/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c: In function 'main': make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/multivalue.dir/multivalue.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/multivalue.c -[ 69%] Building C object tools/mesh/CMakeFiles/analysis.dir/analysis.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/analysis.dir/analysis.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/analysis.c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c: In function 'main': +/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:30:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] + 30 | scanf("%s", flnm); + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c:97:2: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fscanf(pfile1,"%lf %lf %lf",&origin_xyz[0],&origin_xyz[1],&origin_xyz[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1402,22 +1424,15 @@ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c:155:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 155 | fscanf(pfile2,"%i %i %i",&itmp[0],&itmp[1],&itmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:42:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] + 42 | scanf("%s", newfile); + | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c:156:3: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 156 | fscanf(pfile2,"%lf %lf %lf",&datapt[0],&tmp[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c:157:3: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&datapt[1],&tmp[2]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c:158:3: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] - 158 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&tmp[1],&datapt[2]); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c: In function 'main': -/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:30:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] - 30 | scanf("%s", flnm); - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:42:5: warning: ignoring return value of 'scanf' declared with attribute 'warn_unused_result' [-Wunused-result] - 42 | scanf("%s", newfile); - | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:54:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 54 | fscanf(inFile, "%s", title); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1433,6 +1448,9 @@ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:66:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 66 | fscanf(inFile, "%d", &idum2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/tensor2dx.c:158:3: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] + 158 | fscanf(pfile2,"%lf %lf %lf",&tmp[0],&tmp[1],&datapt[2]); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:69:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 69 | fscanf(inFile, "%d", &km); | ^~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1457,7 +1475,6 @@ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:90:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 90 | fscanf(inFile, "%lf", &ox); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 70%] Building C object tools/mesh/CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:93:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 93 | fscanf(inFile, "%lf", &oy); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1500,6 +1517,13 @@ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/uhbd_asc2bin.c:138:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 138 | fscanf(inFile, "%lf", RAT3(grid, i, j, k)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 66%] Building C object tools/mesh/CMakeFiles/multivalue.dir/multivalue.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/multivalue.dir/multivalue.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/multivalue.c +[ 68%] Building C object tools/mesh/CMakeFiles/analysis.dir/analysis.c.o +[ 67%] Building C object tools/mesh/CMakeFiles/value.dir/value.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/value.dir/value.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/value.c +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/analysis.dir/analysis.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/analysis.c +[ 69%] Building C object tools/mesh/CMakeFiles/similarity.dir/similarity.c.o /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/del2dx.c: In function 'main': /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/del2dx.c:76:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 76 | fread(&igrid, 1, sizeof(int), pfile); @@ -1516,105 +1540,125 @@ /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/del2dx.c:106:2: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 106 | fread(oldmid, 3, sizeof(float), pfile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/dx2uhbd.c -[ 72%] Linking C executable ../bin/mgmesh +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/similarity.dir/similarity.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/similarity.c +[ 70%] Linking C executable ../bin/mgmesh cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mgmesh.dir/link.txt --verbose=1 -[ 73%] Linking C executable ../bin/del2dx -[ 74%] Linking C executable ../bin/tensor2dx -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/del2dx.dir/link.txt --verbose=1 +[ 72%] Linking C executable ../bin/tensor2dx cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/tensor2dx.dir/link.txt --verbose=1 -[ 75%] Linking C executable ../bin/value -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mgmesh.dir/mgmesh.c.o -o ../bin/mgmesh ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/value.dir/link.txt --verbose=1 -[ 76%] Linking C executable ../bin/uhbd_asc2bin +[ 73%] Linking C executable ../bin/uhbd_asc2bin cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/uhbd_asc2bin.dir/link.txt --verbose=1 +[ 74%] Linking C executable ../bin/del2dx +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/del2dx.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mgmesh.dir/mgmesh.c.o -o ../bin/mgmesh ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/tensor2dx.dir/tensor2dx.c.o -o ../bin/tensor2dx ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/value.dir/value.c.o -o ../bin/value ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -o ../bin/uhbd_asc2bin ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 75%] Linking C executable ../bin/benchmark +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmark.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/del2dx.dir/del2dx.c.o -o ../bin/del2dx ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -[ 77%] Linking C executable ../bin/dx2uhbd -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2uhbd.dir/link.txt --verbose=1 -[ 79%] Linking C executable ../bin/dx2mol +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/uhbd_asc2bin.dir/uhbd_asc2bin.c.o -o ../bin/uhbd_asc2bin ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 76%] Linking C executable ../bin/dx2mol cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2mol.dir/link.txt --verbose=1 -[ 80%] Linking C executable ../bin/dxmath -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dxmath.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -o ../bin/dx2uhbd ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dxmath.dir/dxmath.c.o -o ../bin/dxmath ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/benchmark.dir/benchmark.c.o -o ../bin/benchmark ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 77%] Linking C executable ../bin/value +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/value.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dx2mol.dir/dx2mol.c.o -o ../bin/dx2mol ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -[ 81%] Linking C executable ../bin/multivalue +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/value.dir/value.c.o -o ../bin/value ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 79%] Linking C executable ../bin/multivalue cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/multivalue.dir/link.txt --verbose=1 -[ 82%] Linking C executable ../bin/benchmark -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/benchmark.dir/link.txt --verbose=1 +[ 80%] Linking C executable ../bin/dxmath +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dxmath.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/multivalue.dir/multivalue.c.o -o ../bin/multivalue ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -[ 83%] Linking C executable ../bin/smooth -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/smooth.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/benchmark.dir/benchmark.c.o -o ../bin/benchmark ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/smooth.dir/smooth.c.o -o ../bin/smooth ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -[ 84%] Linking C executable ../bin/analysis -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysis.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/analysis.dir/analysis.c.o -o ../bin/analysis ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dxmath.dir/dxmath.c.o -o ../bin/dxmath ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 86%] Linking C executable ../bin/mergedx -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +[ 80%] Built target mgmesh +[ 81%] Linking C executable ../bin/analysis +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/analysis.dir/link.txt --verbose=1 +make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/depend +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 86%] Built target value +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake --color= +[ 81%] Built target tensor2dx make -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/depend -[ 86%] Built target tensor2dx -[ 86%] Built target del2dx +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/analysis.dir/analysis.c.o -o ../bin/analysis ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/manip /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/born.dir/DependInfo.cmake --color= +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +[ 81%] Built target del2dx make -f tools/manip/CMakeFiles/coulomb.dir/build.make tools/manip/CMakeFiles/coulomb.dir/depend -[ 86%] Built target mgmesh -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mergedx.dir/mergedx.c.o -o ../bin/mergedx ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh/CMakeFiles/dx2uhbd.dir/depend.internal". make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/manip /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/DependInfo.cmake --color= -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/born.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/born.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/born.dir/depend.internal". +[ 81%] Built target uhbd_asc2bin +Scanning dependencies of target dx2uhbd +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +Scanning dependencies of target born +make -f tools/mesh/CMakeFiles/dx2uhbd.dir/build.make tools/mesh/CMakeFiles/dx2uhbd.dir/build +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/build +[ 81%] Built target dx2mol +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip/CMakeFiles/coulomb.dir/depend.internal". -Scanning dependencies of target born +[ 82%] Linking C executable ../bin/smooth +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/smooth.dir/link.txt --verbose=1 Scanning dependencies of target coulomb make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make -f tools/manip/CMakeFiles/coulomb.dir/build.make tools/manip/CMakeFiles/coulomb.dir/build -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/manip/CMakeFiles/born.dir/build.make tools/manip/CMakeFiles/born.dir/build -[ 86%] Built target dxmath +[ 82%] Built target benchmark +[ 83%] Building C object tools/mesh/CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/smooth.dir/smooth.c.o -o ../bin/smooth ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 84%] Building C object tools/manip/CMakeFiles/born.dir/born.c.o make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 87%] Linking C executable ../bin/similarity -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 -[ 88%] Building C object tools/manip/CMakeFiles/coulomb.dir/coulomb.c.o -[ 89%] Building C object tools/manip/CMakeFiles/born.dir/born.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/mesh/dx2uhbd.c cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/born.dir/born.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/manip/born.c -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/coulomb.dir/coulomb.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/manip/coulomb.c make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +[ 86%] Building C object tools/manip/CMakeFiles/coulomb.dir/coulomb.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/coulomb.dir/coulomb.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/manip/coulomb.c make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/similarity.dir/similarity.c.o -o ../bin/similarity ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 86%] Built target multivalue +[ 87%] Linking C executable ../bin/mergedx2 +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx2.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 89%] Built target uhbd_asc2bin +[ 87%] Built target value +[ 87%] Built target dxmath +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mergedx2.dir/mergedx2.c.o -o ../bin/mergedx2 ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 88%] Linking C executable ../bin/mergedx +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 89%] Built target dx2uhbd +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mergedx.dir/mergedx.c.o -o ../bin/mergedx ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 88%] Built target analysis make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +[ 89%] Linking C executable ../bin/dx2uhbd [ 89%] Built target smooth -[ 89%] Built target dx2mol -[ 89%] Built target multivalue +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/dx2uhbd.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/dx2uhbd.dir/dx2uhbd.c.o -o ../bin/dx2uhbd ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 90%] Linking C executable ../bin/born +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/born.dir/link.txt --verbose=1 +[ 91%] Linking C executable ../bin/similarity +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 +[ 93%] Linking C executable ../bin/coulomb +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/coulomb.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/born.dir/born.c.o -o ../bin/born ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/similarity.dir/similarity.c.o -o ../bin/similarity ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/coulomb.dir/coulomb.c.o -o ../bin/coulomb ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 89%] Built target benchmark make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 90%] Linking C executable ../bin/mergedx2 -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/mergedx2.dir/link.txt --verbose=1 -[ 90%] Built target analysis -[ 90%] Built target similarity -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/mergedx2.dir/mergedx2.c.o -o ../bin/mergedx2 ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 93%] Built target mergedx2 +[ 93%] Built target mergedx +[ 93%] Built target similarity make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 90%] Built target mergedx -[ 91%] Linking C executable ../bin/coulomb -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/coulomb.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/coulomb.dir/coulomb.c.o -o ../bin/coulomb ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp +[ 93%] Built target dx2uhbd +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +[ 93%] Built target coulomb +[ 93%] Built target born /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/routines.c: In function 'writematMG': /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/routines.c:1840:30: warning: '%s' directive writing 3 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 1840 | sprintf(outpath, "%s.%s", writematstem, "mat"); @@ -1630,13 +1674,6 @@ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 93%] Linking C executable ../bin/born -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/manip && /usr/bin/cmake -E cmake_link_script CMakeFiles/born.dir/link.txt --verbose=1 -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -/usr/bin/cc -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -Wl,--no-as-needed CMakeFiles/born.dir/born.c.o -o ../bin/born ../../lib/libapbs_mg.so.3 ../../lib/libapbs_pmgc.so.3 ../../lib/libapbs_generic.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp -[ 93%] Built target mergedx2 -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 93%] Built target coulomb /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/routines.c: In function 'writedataMG': /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/routines.c:2676:30: warning: '%s' directive writing 5 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 2676 | sprintf(outpath, "%s.%s", writestem, "dxbin"); @@ -1736,8 +1773,6 @@ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 93%] Built target born [ 94%] Linking C shared library ../lib/libapbs_routines.so cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs_routines.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -shared -Wl,-soname,libapbs_routines.so.3 -o ../lib/libapbs_routines.so.3 CMakeFiles/apbs_routines.dir/routines.c.o -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp ../lib/libapbs_mg.so.3 ../lib/libapbs_generic.so.3 ../lib/libapbs_pmgc.so.3 -lm -lstdc++ /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so -lmaloc -fopenmp @@ -1745,29 +1780,29 @@ make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' [ 94%] Built target apbs_routines make -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/depend -make -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/depend make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/depend cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/apbs-3.0.0+dfsg1/apbs /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/DependInfo.cmake --color= -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/depend.internal". -Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs.dir/depend.internal". Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src/CMakeFiles/apbs.dir/depend.internal". -Scanning dependencies of target _apbslib -make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -make -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/build Scanning dependencies of target apbs -make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/depend.internal". +Dependee "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/depend.internal". make -f src/CMakeFiles/apbs.dir/build.make src/CMakeFiles/apbs.dir/build make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' -[ 95%] Building C object tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cc -D_apbslib_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -I/usr/include/python3.9 -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c +Scanning dependencies of target _apbslib +make[4]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +make -f tools/python/CMakeFiles/_apbslib.dir/build.make tools/python/CMakeFiles/_apbslib.dir/build +[ 95%] Building C object src/CMakeFiles/apbs.dir/routines.c.o [ 96%] Building C object src/CMakeFiles/apbs.dir/main.c.o -cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/apbs.dir/main.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/main.c -[ 97%] Building C object src/CMakeFiles/apbs.dir/routines.c.o cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/apbs.dir/routines.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/routines.c +make[4]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src && /usr/bin/cc -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fopenmp -o CMakeFiles/apbs.dir/main.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/main.c +[ 97%] Building C object tools/python/CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o +cd /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python && /usr/bin/cc -D_apbslib_EXPORTS -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/src -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/include -I/usr/include/python3.9 -I/build/reproducible-path/apbs-3.0.0+dfsg1/apbs/tools/python -g -O2 -fdebug-prefix-map=/build/reproducible-path/apbs-3.0.0+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fcommon -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -O3 -DNDEBUG -fPIC -fopenmp -o CMakeFiles/_apbslib.dir/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c.o -c /build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu/tools/python/CMakeFiles/_apbslib.dir/apbslibPYTHON_wrap.c /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/main.c: In function 'main': /build/reproducible-path/apbs-3.0.0+dfsg1/apbs/src/main.c:288:64: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 288 | Vnm_tprint( 1, "This executable compiled on %s at %s\n\n", __DATE__, __TIME__); @@ -1915,7 +1950,7 @@ -------------------------------------------------------------------------------- Testing forces from apbs-forces.in -Checking forces for input file apbs-forces.inChecking Polar ForcesChecking Apolar ForcesElapsed time: 0.002844 seconds +Checking forces for input file apbs-forces.inChecking Polar ForcesChecking Apolar ForcesElapsed time: 0.002388 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-mol-auto.in @@ -2197,7 +2232,7 @@ *** PASSED *** Testing computed result -2.297735526282E+02 against expected result -2.297735E+02 *** PASSED *** -Elapsed time: 23.939253 seconds +Elapsed time: 36.007740 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-auto.in @@ -2477,7 +2512,7 @@ *** PASSED *** Testing computed result -2.290124252387E+02 against expected result -2.290124E+02 *** PASSED *** -Elapsed time: 19.822142 seconds +Elapsed time: 30.526945 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-mol-parallel.in @@ -3625,7 +3660,7 @@ *** PASSED *** Testing computed result -2.304918486746E+02 against expected result -2.304918E+02 *** PASSED *** -Elapsed time: 102.632112 seconds +Elapsed time: 161.007673 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-parallel.in @@ -4773,9 +4808,9 @@ *** PASSED *** Testing computed result -2.293871439560E+02 against expected result -2.293871E+02 *** PASSED *** -Elapsed time: 98.155747 seconds +Elapsed time: 150.432182 seconds -------------------------------------------------------------------------------- -Total elapsed time: 244.552098 seconds +Total elapsed time: 377.976928 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for actin-dimer-auto section @@ -5072,7 +5107,7 @@ *** PASSED *** Testing computed result 1.048683058628E+02 against expected result 1.048683E+02 *** PASSED *** -Elapsed time: 398.487874 seconds +Elapsed time: 469.207803 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-auto.in @@ -5367,9 +5402,9 @@ *** PASSED *** Testing computed result 1.095841077691E+02 against expected result 1.095841E+02 *** PASSED *** -Elapsed time: 244.816045 seconds +Elapsed time: 318.271515 seconds -------------------------------------------------------------------------------- -Total elapsed time: 643.303919 seconds +Total elapsed time: 787.479318 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for actin-dimer-parallel section @@ -7855,7 +7890,7 @@ *** PASSED *** Testing computed result 9.817456162019E+01 against expected result 9.817456E+01 *** PASSED *** -Elapsed time: 1804.451694 seconds +Elapsed time: 2278.429386 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-parallel.in @@ -10339,9 +10374,9 @@ *** PASSED *** Testing computed result 1.155420677293E+02 against expected result 1.155421E+02 *** PASSED *** -Elapsed time: 1140.750792 seconds +Elapsed time: 1478.930617 seconds -------------------------------------------------------------------------------- -Total elapsed time: 2945.202486 seconds +Total elapsed time: 3757.360003 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for alkanes section @@ -11256,9 +11291,9 @@ *** PASSED *** Testing computed result 1.192358496286E+01 against expected result 1.192358E+01 *** PASSED *** -Elapsed time: 26.511234 seconds +Elapsed time: 56.712380 seconds -------------------------------------------------------------------------------- -Total elapsed time: 26.511234 seconds +Total elapsed time: 56.712380 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for FKBP section @@ -11764,7 +11799,7 @@ *** PASSED *** Testing computed result 1.500810086371E+01 against expected result 1.500810E+01 *** PASSED *** -Elapsed time: 73.580098 seconds +Elapsed time: 89.511323 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file 1d7h-dmso-smol.in @@ -12268,7 +12303,7 @@ *** PASSED *** Testing computed result 1.624454192073E+01 against expected result 1.624454E+01 *** PASSED *** -Elapsed time: 57.399765 seconds +Elapsed time: 65.219885 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file 1d7i-dss-mol.in @@ -12772,7 +12807,7 @@ *** PASSED *** Testing computed result 1.442499933668E+01 against expected result 1.442501E+01 *** PASSED *** -Elapsed time: 75.368373 seconds +Elapsed time: 83.042068 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file 1d7i-dss-smol.in @@ -13276,9 +13311,9 @@ *** PASSED *** Testing computed result 1.545150742844E+01 against expected result 1.545150E+01 *** PASSED *** -Elapsed time: 56.520426 seconds +Elapsed time: 62.327696 seconds -------------------------------------------------------------------------------- -Total elapsed time: 262.868662 seconds +Total elapsed time: 300.100972 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for hca-bind section @@ -13682,7 +13717,7 @@ *** PASSED *** Testing computed result -5.246475812665E+01 against expected result -5.246476E+01 *** PASSED *** -Elapsed time: 72.974957 seconds +Elapsed time: 80.703799 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol.in @@ -14084,9 +14119,9 @@ *** PASSED *** Testing computed result -5.405979017066E+01 against expected result -5.405978E+01 *** PASSED *** -Elapsed time: 42.412540 seconds +Elapsed time: 53.442036 seconds -------------------------------------------------------------------------------- -Total elapsed time: 115.387497 seconds +Total elapsed time: 134.145835 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for ionize section @@ -14600,7 +14635,7 @@ *** PASSED *** Testing computed result -4.745272838398E+02 against expected result -4.745273E+02 *** PASSED *** -Elapsed time: 48.224716 seconds +Elapsed time: 56.576949 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol.in @@ -15112,9 +15147,9 @@ *** PASSED *** Testing computed result -4.721246714828E+02 against expected result -4.721247E+02 *** PASSED *** -Elapsed time: 40.103460 seconds +Elapsed time: 46.850995 seconds -------------------------------------------------------------------------------- -Total elapsed time: 88.328176 seconds +Total elapsed time: 103.427944 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for ion-pmf section @@ -15399,9 +15434,9 @@ *** PASSED *** Testing computed result -1.125191605614E+03 against expected result -1.125192E+03 *** PASSED *** -Elapsed time: 22.218599 seconds +Elapsed time: 38.083069 seconds -------------------------------------------------------------------------------- -Total elapsed time: 22.218599 seconds +Total elapsed time: 38.083069 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for pka-lig section @@ -15708,7 +15743,7 @@ *** PASSED *** Testing computed result 8.083515648730E+00 against expected result 8.083516E+00 *** PASSED *** -Elapsed time: 47.149783 seconds +Elapsed time: 57.207996 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-vdw.in @@ -16013,7 +16048,7 @@ *** PASSED *** Testing computed result 2.096300255723E+01 against expected result 2.096296E+01 *** PASSED *** -Elapsed time: 32.538262 seconds +Elapsed time: 44.841712 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-mol-surf.in @@ -16318,7 +16353,7 @@ *** PASSED *** Testing computed result 1.192607686581E+02 against expected result 1.192608E+02 *** PASSED *** -Elapsed time: 36.103372 seconds +Elapsed time: 47.954118 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol-surf.in @@ -16623,9 +16658,9 @@ *** PASSED *** Testing computed result 1.088773280806E+02 against expected result 1.088773E+02 *** PASSED *** -Elapsed time: 31.523073 seconds +Elapsed time: 38.836301 seconds -------------------------------------------------------------------------------- -Total elapsed time: 147.314490 seconds +Total elapsed time: 188.840127 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for point-pmf section @@ -16863,7 +16898,7 @@ *** PASSED *** Testing computed result 1.830820799027E+01 against expected result 1.830821E+01 *** PASSED *** -Elapsed time: 8.808503 seconds +Elapsed time: 11.935381 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file complex-0_2.in @@ -17099,7 +17134,7 @@ *** PASSED *** Testing computed result 8.906694086750E+00 against expected result 8.906694E+00 *** PASSED *** -Elapsed time: 9.629025 seconds +Elapsed time: 12.214138 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file complex-0_3.in @@ -17335,7 +17370,7 @@ *** PASSED *** Testing computed result 5.909599816984E+00 against expected result 5.909600E+00 *** PASSED *** -Elapsed time: 9.359972 seconds +Elapsed time: 12.031288 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file complex-0_4.in @@ -17571,9 +17606,9 @@ *** PASSED *** Testing computed result 4.430144947418E+00 against expected result 4.430145E+00 *** PASSED *** -Elapsed time: 9.389294 seconds +Elapsed time: 12.294831 seconds -------------------------------------------------------------------------------- -Total elapsed time: 37.186794 seconds +Total elapsed time: 48.475638 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for solv section @@ -17820,7 +17855,7 @@ *** PASSED *** Testing computed result -3.541635359318E+02 against expected result -3.541635E+02 *** PASSED *** -Elapsed time: 15.324874 seconds +Elapsed time: 20.543898 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-smol.in @@ -18101,9 +18136,9 @@ *** PASSED *** Testing computed result -3.536629226599E+02 against expected result -3.536629E+02 *** PASSED *** -Elapsed time: 12.254628 seconds +Elapsed time: 17.996254 seconds -------------------------------------------------------------------------------- -Total elapsed time: 27.579502 seconds +Total elapsed time: 38.540152 seconds Test results have been logged -------------------------------------------------------------------------------- Running tests for protein-rna section @@ -18412,7 +18447,7 @@ *** PASSED *** Testing computed result 8.674116429352E+01 against expected result 8.674116E+01 *** PASSED *** -Elapsed time: 123.534293 seconds +Elapsed time: 153.721219 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.050.in @@ -18719,7 +18754,7 @@ *** PASSED *** Testing computed result 9.606836713865E+01 against expected result 9.606837E+01 *** PASSED *** -Elapsed time: 123.304532 seconds +Elapsed time: 149.816518 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.075.in @@ -19026,7 +19061,7 @@ *** PASSED *** Testing computed result 1.011537214883E+02 against expected result 1.011537E+02 *** PASSED *** -Elapsed time: 130.225394 seconds +Elapsed time: 169.563816 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.100.in @@ -19333,7 +19368,7 @@ *** PASSED *** Testing computed result 1.046142116108E+02 against expected result 1.046142E+02 *** PASSED *** -Elapsed time: 129.447310 seconds +Elapsed time: 149.403636 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.125.in @@ -19640,7 +19675,7 @@ *** PASSED *** Testing computed result 1.072226817611E+02 against expected result 1.072227E+02 *** PASSED *** -Elapsed time: 125.307852 seconds +Elapsed time: 153.472289 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.150.in @@ -19947,7 +19982,7 @@ *** PASSED *** Testing computed result 1.093084123761E+02 against expected result 1.093084E+02 *** PASSED *** -Elapsed time: 125.971864 seconds +Elapsed time: 198.501681 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.175.in @@ -20254,7 +20289,7 @@ *** PASSED *** Testing computed result 1.110412443877E+02 against expected result 1.110412E+02 *** PASSED *** -Elapsed time: 124.501868 seconds +Elapsed time: 158.694415 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.200.in @@ -20561,7 +20596,7 @@ *** PASSED *** Testing computed result 1.125199716537E+02 against expected result 1.125200E+02 *** PASSED *** -Elapsed time: 124.955322 seconds +Elapsed time: 154.183887 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.225.in @@ -20868,7 +20903,7 @@ *** PASSED *** Testing computed result 1.138070465620E+02 against expected result 1.138070E+02 *** PASSED *** -Elapsed time: 132.526206 seconds +Elapsed time: 164.696041 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.250.in @@ -21175,7 +21210,7 @@ *** PASSED *** Testing computed result 1.149444369078E+02 against expected result 1.149444E+02 *** PASSED *** -Elapsed time: 139.235151 seconds +Elapsed time: 162.604468 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.275.in @@ -21482,7 +21517,7 @@ *** PASSED *** Testing computed result 1.159616972339E+02 against expected result 1.159617E+02 *** PASSED *** -Elapsed time: 153.242116 seconds +Elapsed time: 155.563426 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.300.in @@ -21789,7 +21824,7 @@ *** PASSED *** Testing computed result 1.168804254687E+02 against expected result 1.168804E+02 *** PASSED *** -Elapsed time: 136.846297 seconds +Elapsed time: 128.505073 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.325.in @@ -22096,7 +22131,7 @@ *** PASSED *** Testing computed result 1.177168854907E+02 against expected result 1.177169E+02 *** PASSED *** -Elapsed time: 161.848505 seconds +Elapsed time: 113.820554 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.400.in @@ -22403,7 +22438,7 @@ *** PASSED *** Testing computed result 1.198456038802E+02 against expected result 1.198456E+02 *** PASSED *** -Elapsed time: 168.511748 seconds +Elapsed time: 304.207462 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.500.in @@ -22710,7 +22745,7 @@ *** PASSED *** Testing computed result 1.220607673699E+02 against expected result 1.220608E+02 *** PASSED *** -Elapsed time: 144.489725 seconds +Elapsed time: 326.938351 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.600.in @@ -23017,7 +23052,7 @@ *** PASSED *** Testing computed result 1.238080564885E+02 against expected result 1.238081E+02 *** PASSED *** -Elapsed time: 128.530234 seconds +Elapsed time: 381.277986 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.700.in @@ -23324,7 +23359,7 @@ *** PASSED *** Testing computed result 1.252364090878E+02 against expected result 1.252364E+02 *** PASSED *** -Elapsed time: 141.670367 seconds +Elapsed time: 477.831260 seconds -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Testing input file apbs-0.800.in @@ -23631,9 +23666,9 @@ *** PASSED *** Testing computed result 1.264340604648E+02 against expected result 1.264341E+02 *** PASSED *** -Elapsed time: 146.075828 seconds +Elapsed time: 521.543404 seconds -------------------------------------------------------------------------------- -Total elapsed time: 2460.224612 seconds +Total elapsed time: 4024.345486 seconds Test results have been logged -------------------------------------------------------------------------------- make[1]: Leaving directory '/build/reproducible-path/apbs-3.0.0+dfsg1' @@ -23646,7 +23681,7 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1' dh_auto_install --sourcedir=apbs --destdir=/build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/ - cd obj-x86_64-linux-gnu && make -j16 install DESTDIR=/build/reproducible-path/apbs-3.0.0\+dfsg1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j15 install DESTDIR=/build/reproducible-path/apbs-3.0.0\+dfsg1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/apbs-3.0.0+dfsg1/apbs -B/build/reproducible-path/apbs-3.0.0+dfsg1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -24347,22 +24382,22 @@ -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/README.html -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/CMakeLists.txt -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/born -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/coulomb --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/mergedx2 +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/born -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/similarity +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/dx2uhbd -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/mergedx --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/analysis +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/mergedx2 -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/smooth --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/benchmark +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/analysis +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/dxmath -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/multivalue -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/dx2mol --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/dxmath --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/dx2uhbd +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/value +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/benchmark +-- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/del2dx -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/uhbd_asc2bin -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/tensor2dx --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/del2dx --- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/value -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/share/apbs/tools/bin/mgmesh -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libapbs_routines.so.3 -- Installing: /build/reproducible-path/apbs-3.0.0+dfsg1/debian/tmp/usr/lib/x86_64-linux-gnu/libapbs_routines.so @@ -24460,12 +24495,12 @@ dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libapbs3/usr/lib/x86_64-linux-gnu/libapbs_generic.so.3 was not linked against libpthread.so.0 (it uses none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx were not linked against libmpi.so.40 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx were not linked against libpthread.so.0 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx were not linked against libapbs_pmgc.so.3 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx were not linked against libstdc++.so.6 (they use none of the library's symbols) -dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx were not linked against libgomp.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/bin/apbs was not linked against libapbs_routines.so.3 (it uses none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin were not linked against libstdc++.so.6 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin were not linked against libgomp.so.1 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin were not linked against libmpi.so.40 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin were not linked against libpthread.so.0 (they use none of the library's symbols) +dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/apbs/usr/lib/apbs/tools/bin/bin/similarity debian/apbs/usr/lib/apbs/tools/bin/bin/tensor2dx debian/apbs/usr/lib/apbs/tools/bin/bin/analysis debian/apbs/usr/lib/apbs/tools/bin/bin/value debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx2 debian/apbs/usr/lib/apbs/tools/bin/bin/born debian/apbs/usr/bin/apbs debian/apbs/usr/lib/apbs/tools/bin/bin/mgmesh debian/apbs/usr/lib/apbs/tools/bin/bin/benchmark debian/apbs/usr/lib/apbs/tools/bin/bin/smooth debian/apbs/usr/lib/apbs/tools/bin/bin/del2dx debian/apbs/usr/lib/apbs/tools/bin/bin/mergedx debian/apbs/usr/lib/apbs/tools/bin/bin/multivalue debian/apbs/usr/lib/apbs/tools/bin/bin/dx2uhbd debian/apbs/usr/lib/apbs/tools/bin/bin/coulomb debian/apbs/usr/lib/apbs/tools/bin/bin/dx2mol debian/apbs/usr/lib/apbs/tools/bin/bin/dxmath debian/apbs/usr/lib/apbs/tools/bin/bin/uhbd_asc2bin were not linked against libapbs_pmgc.so.3 (they use none of the library's symbols) dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libapbs-dev: substitution variable ${shlibs:Depends} used, but is not defined @@ -24475,12 +24510,12 @@ dpkg-gencontrol: warning: package python3-apbslib: substitution variable ${python3:Versions} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'apbs' in '../apbs_3.0.0+dfsg1-3_amd64.deb'. +dpkg-deb: building package 'libapbs3' in '../libapbs3_3.0.0+dfsg1-3_amd64.deb'. dpkg-deb: building package 'apbs-dbgsym' in '../apbs-dbgsym_3.0.0+dfsg1-3_amd64.deb'. -dpkg-deb: building package 'python3-apbslib-dbgsym' in '../python3-apbslib-dbgsym_3.0.0+dfsg1-3_amd64.deb'. dpkg-deb: building package 'libapbs3-dbgsym' in '../libapbs3-dbgsym_3.0.0+dfsg1-3_amd64.deb'. -dpkg-deb: building package 'libapbs3' in '../libapbs3_3.0.0+dfsg1-3_amd64.deb'. dpkg-deb: building package 'libapbs-dev' in '../libapbs-dev_3.0.0+dfsg1-3_amd64.deb'. +dpkg-deb: building package 'python3-apbslib-dbgsym' in '../python3-apbslib-dbgsym_3.0.0+dfsg1-3_amd64.deb'. +dpkg-deb: building package 'apbs' in '../apbs_3.0.0+dfsg1-3_amd64.deb'. dpkg-deb: building package 'apbs-data' in '../apbs-data_3.0.0+dfsg1-3_all.deb'. dpkg-deb: building package 'python3-apbslib' in '../python3-apbslib_3.0.0+dfsg1-3_amd64.deb'. dpkg-genbuildinfo --build=binary @@ -24490,12 +24525,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/854233/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1235975 and its subdirectories -I: Current time: Sun Feb 9 07:35:47 -12 2025 -I: pbuilder-time-stamp: 1739129747 +I: removing directory /srv/workspace/pbuilder/854233 and its subdirectories +I: Current time: Tue Jan 9 06:20:09 +14 2024 +I: pbuilder-time-stamp: 1704730809