Diff of the two buildlogs: -- --- b1/build.log 2024-08-07 17:44:24.571382002 +0000 +++ b2/build.log 2024-08-07 17:45:29.312635324 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Aug 7 05:41:09 -12 2024 -I: pbuilder-time-stamp: 1723052469 +I: Current time: Wed Sep 10 14:07:26 +14 2025 +I: pbuilder-time-stamp: 1757462846 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +17,8 @@ I: copying [./bamtools_2.5.1+dfsg-9.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.TPCGFmZL/trustedkeys.kbx': General error -gpgv: Signature made Thu Apr 15 07:50:42 2021 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.z2bX2Jig/trustedkeys.kbx': General error +gpgv: Signature made Fri Apr 16 09:50:42 2021 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -37,135 +37,166 @@ dpkg-source: info: applying shared_and_static.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/1041056/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 10 14:07 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=20 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=42 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='b71528588d1e45c68b079275b519740b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='1041056' - PS1='# ' - PS2='> ' + INVOCATION_ID=94ea277d7df648e4b97454437a5a490c + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1883586 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OyUo1BZm/pbuilderrc_1gu3 --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OyUo1BZm/b1 --logfile b1/build.log bamtools_2.5.1+dfsg-9.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OyUo1BZm/pbuilderrc_2WaG --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OyUo1BZm/b2 --logfile b2/build.log bamtools_2.5.1+dfsg-9.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.9.7+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1~bpo12+1 (2024-07-03) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Mar 27 22:09 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 69032 Mar 27 22:09 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Mar 27 22:09 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Mar 27 22:09 more - -rwsr-xr-x 1 root root 55528 Mar 27 22:09 mount - -rwxr-xr-x 1 root root 18664 Mar 27 22:09 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 6 21:27 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Mar 27 22:09 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Jan 19 2024 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Mar 27 22:09 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Mar 27 22:09 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/1041056/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Mar 28 2022 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Mar 29 2024 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 69032 Mar 29 2024 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98048 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Mar 29 2024 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Mar 29 2024 more + -rwsr-xr-x 1 root root 55528 Mar 29 2024 mount + -rwxr-xr-x 1 root root 18664 Mar 29 2024 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Dec 17 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Mar 28 2022 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 9 Sep 10 14:07 sh -> /bin/bash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Mar 29 2024 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Jan 20 2024 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Mar 29 2024 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Mar 29 2024 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -276,7 +307,7 @@ Get: 61 http://deb.debian.org/debian bullseye/main amd64 help2man amd64 1.48.1 [190 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 libjsoncpp-dev amd64 1.9.4-4 [25.4 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2+deb11u2 [191 kB] -Fetched 73.4 MB in 3s (23.2 MB/s) +Fetched 73.4 MB in 1s (146 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19711 files and directories currently installed.) @@ -544,7 +575,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/bamtools-2.5.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../bamtools_2.5.1+dfsg-9_source.changes +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/bamtools-2.5.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../bamtools_2.5.1+dfsg-9_source.changes dpkg-buildpackage: info: source package bamtools dpkg-buildpackage: info: source version 2.5.1+dfsg-9 dpkg-buildpackage: info: source distribution unstable @@ -866,7 +901,7 @@ mv docs/Doxyfile.bak docs/Doxyfile make[1]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg' dh_auto_build -Nlibbamtools-doc - cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/bamtools-2.5.1+dfsg -B/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -879,117 +914,145 @@ make[3]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bamtools-2.5.1+dfsg /build/reproducible-path/bamtools-2.5.1+dfsg/src/api /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools.dir/DependInfo.cmake --color= Dependee "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools_static.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools_static.dir/depend.internal". -Dependee "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools_static.dir/depend.internal". Dependee "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools.dir/DependInfo.cmake" is newer than depender "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools.dir/depend.internal". Dependee "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools.dir/depend.internal". -Scanning dependencies of target BamTools_static +Dependee "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api/CMakeFiles/BamTools_static.dir/depend.internal". Scanning dependencies of target BamTools +Scanning dependencies of target BamTools_static make[3]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' -make -f src/api/CMakeFiles/BamTools_static.dir/build.make src/api/CMakeFiles/BamTools_static.dir/build make -f src/api/CMakeFiles/BamTools.dir/build.make src/api/CMakeFiles/BamTools.dir/build +make -f src/api/CMakeFiles/BamTools_static.dir/build.make src/api/CMakeFiles/BamTools_static.dir/build make[3]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' -[ 1%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamReader.cpp.o -[ 2%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamAlignment.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/BamReader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamReader.cpp -[ 3%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamWriter.cpp.o -[ 4%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o +[ 5%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamReader.cpp.o [ 5%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamMultiReader.cpp.o -[ 6%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamWriter.cpp.o +[ 5%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamWriter.cpp.o +[ 5%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamAlignment.cpp.o +[ 5%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamReader.cpp.o +[ 7%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamHeader.cpp.o +[ 8%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamProgram.cpp.o +[ 9%] Building CXX object src/api/CMakeFiles/BamTools.dir/BamWriter.cpp.o +[ 10%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamHeader.cpp.o +[ 10%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamProgramChain.cpp.o +[ 11%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgram.cpp.o +[ 12%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamReadGroup.cpp.o +[ 13%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgramChain.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/BamAlignment.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamAlignment.cpp -[ 7%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamMultiReader.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/BamAlignment.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamAlignment.cpp -[ 9%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamReader.cpp.o -[ 9%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamHeader.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/BamMultiReader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamMultiReader.cpp -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamMultiReader.cpp +[ 14%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamReadGroupDictionary.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/BamReader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamReader.cpp -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/BamWriter.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamWriter.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/BamMultiReader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamMultiReader.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/BamReader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamReader.cpp +[ 15%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroup.cpp.o +[ 16%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamAlignment.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/BamWriter.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamWriter.cpp -[ 10%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamHeader.cpp.o -[ 11%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgram.cpp.o +[ 17%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamSequenceDictionary.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/BamWriter.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamWriter.cpp +[ 18%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamSequence.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamHeader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamHeader.cpp +[ 19%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/BamMultiReader.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamHeader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamHeader.cpp -[ 12%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamProgramChain.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamProgram.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamProgram.cpp -[ 13%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamProgram.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamProgram.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamProgram.cpp +[ 20%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamReader_p.cpp.o +[ 21%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamHeader_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/BamAlignment.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamAlignment.cpp +[ 23%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o +[ 23%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequence.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamProgramChain.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamProgramChain.cpp -[ 14%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamProgramChain.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/BamMultiReader.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/BamMultiReader.cpp +[ 24%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamMultiReader_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamReadGroup.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamProgram.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamProgram.cpp +[ 25%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamRandomAccessController_p.cpp.o +[ 27%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/index/BamIndexFactory_p.cpp.o +[ 27%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamProgramChain.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamProgramChain.cpp -[ 15%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamReadGroup.cpp.o +[ 29%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o +[ 29%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamReadGroup.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamReadGroup.cpp -[ 16%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamReadGroupDictionary.cpp.o -[ 17%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamReadGroupDictionary.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamReadGroupDictionary.cpp -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamReadGroupDictionary.cpp -[ 18%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamReadGroup.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamReadGroup.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamReadGroup.cpp -[ 19%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamSequence.cpp.o +[ 30%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamWriter_p.cpp.o +[ 31%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamSequence.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamSequence.cpp -[ 20%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/SamSequenceDictionary.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamReadGroupDictionary.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamReadGroupDictionary.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/SamSequenceDictionary.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamSequenceDictionary.cpp -[ 21%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamHeader_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamHeader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamHeader_p.cpp -[ 22%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequence.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamSequence.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamSequence.cpp -[ 23%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamMultiReader_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamMultiReader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamMultiReader_p.cpp -[ 24%] Building CXX object src/api/CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamHeader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamHeader_p.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/SamSequenceDictionary.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/SamSequenceDictionary.cpp -[ 25%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamRandomAccessController_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamRandomAccessController_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamRandomAccessController_p.cpp -[ 26%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamReader_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamReader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamReader_p.cpp -[ 27%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/bam/BamHeader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamHeader_p.cpp -[ 28%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/bam/BamWriter_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamWriter_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamWriter_p.cpp -[ 29%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamMultiReader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamMultiReader_p.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/bam/BamMultiReader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamMultiReader_p.cpp -[ 30%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/index/BamIndexFactory_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/index/BamIndexFactory_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/index/BamIndexFactory_p.cpp -[ 31%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/bam/BamRandomAccessController_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamRandomAccessController_p.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamRandomAccessController_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamRandomAccessController_p.cpp [ 32%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/index/BamStandardIndex_p.cpp.o +[ 33%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/index/BamToolsIndex_p.cpp.o +[ 34%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/bam/BamReader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamReader_p.cpp +[ 35%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/BamDeviceFactory_p.cpp.o +cd 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CMakeFiles/BamTools_static.dir/internal/index/BamIndexFactory_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/index/BamIndexFactory_p.cpp +[ 36%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o +[ 37%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/bam/BamWriter_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamWriter_p.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/index/BamStandardIndex_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/index/BamStandardIndex_p.cpp -[ 33%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. 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-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/index/BamIndexFactory_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/index/BamIndexFactory_p.cpp -[ 37%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/BamDeviceFactory_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/bam/BamReader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/bam/BamReader_p.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/BamDeviceFactory_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamDeviceFactory_p.cpp -[ 38%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamStandardIndex_p.cpp.o +[ 39%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/index/BamToolsIndex_p.cpp.o +[ 40%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o +cd 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/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamFtp_p.cpp +[ 43%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o +[ 44%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamPipe_p.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamHttp_p.cpp +[ 45%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o +cd 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src/api/CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ByteArray_p.cpp +[ 50%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/HostAddress_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.cpp +[ 51%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostInfo_p.cpp +[ 52%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/BamHttp_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/BamHttp_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamHttp_p.cpp -[ 43%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/BamPipe_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/BamPipe_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamPipe_p.cpp -[ 44%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/BgzfStream_p.cpp.o +[ 53%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/BgzfStream_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/BgzfStream_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BgzfStream_p.cpp -[ 45%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BamDeviceFactory_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamDeviceFactory_p.cpp -[ 46%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/ByteArray_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/ByteArray_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ByteArray_p.cpp -[ 47%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BamFile_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamFile_p.cpp -[ 48%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/HostAddress_p.cpp.o +[ 55%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o +[ 55%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/BamPipe_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/BamPipe_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamPipe_p.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HttpHeader_p.cpp +[ 56%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ILocalIODevice_p.cpp +[ 58%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/HostAddress_p.cpp.o +[ 58%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/ByteArray_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/HostAddress_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.cpp -[ 50%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BamFtp_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamFtp_p.cpp -[ 51%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/HostInfo_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/ByteArray_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ByteArray_p.cpp +[ 59%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o +[ 60%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/RollingBuffer_p.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/TcpSocket_p.cpp +[ 61%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/TcpSocketEngine_p.cpp +[ 62%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/HostInfo_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/HostInfo_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostInfo_p.cpp +[ 63%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/HttpHeader_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/HttpHeader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HttpHeader_p.cpp +[ 64%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/ILocalIODevice_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/ILocalIODevice_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ILocalIODevice_p.cpp +[ 65%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/RollingBuffer_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/RollingBuffer_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/RollingBuffer_p.cpp /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.cpp: In member function 'void BamTools::Internal::HostAddress::Clear()': /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.cpp:273:49: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'struct BamTools::Internal::IPv6Address'; use assignment or value-initialization instead [-Wclass-memaccess] 273 | memset(&m_ip6Address, 0, sizeof(IPv6Address)); @@ -998,40 +1061,26 @@ /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.h:31:8: note: 'struct BamTools::Internal::IPv6Address' declared here 31 | struct IPv6Address | ^~~~~~~~~~~ -[ 52%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BamHttp_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BamHttp_p.cpp -[ 53%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/HttpHeader_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/HttpHeader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HttpHeader_p.cpp -[ 54%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/BamPipe_p.cpp.o -cd 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/BgzfStream_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/BgzfStream_p.cpp -[ 56%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/ILocalIODevice_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/ILocalIODevice_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ILocalIODevice_p.cpp -[ 57%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/RollingBuffer_p.cpp.o -cd 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/ByteArray_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ByteArray_p.cpp -[ 59%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/TcpSocket_p.cpp.o +[ 66%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/TcpSocketEngine_unix_p.cpp.o -c 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CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/sam/SamFormatPrinter_p.cpp +[ 70%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/utils/BamException_p.cpp +[ 71%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/TcpSocket_p.cpp.o cd 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-Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/TcpSocketEngine_p.cpp -[ 61%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o +[ 72%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o -c 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-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/HostInfo_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostInfo_p.cpp -[ 64%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/sam/SamFormatParser_p.cpp.o -[ 65%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o +[ 73%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/TcpSocketEngine_p.cpp +[ 74%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/sam/SamFormatParser_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/sam/SamFormatParser_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/sam/SamFormatParser_p.cpp -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/HttpHeader_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HttpHeader_p.cpp -[ 66%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/sam/SamFormatPrinter_p.cpp.o +[ 75%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/sam/SamFormatPrinter_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/sam/SamFormatPrinter_p.cpp -[ 67%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/ILocalIODevice_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/ILocalIODevice_p.cpp -[ 68%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/sam/SamHeaderValidator_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/sam/SamHeaderValidator_p.cpp /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.cpp: In member function 'void BamTools::Internal::HostAddress::Clear()': /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.cpp:273:49: warning: 'void* memset(void*, int, size_t)' clearing an object of non-trivial type 'struct BamTools::Internal::IPv6Address'; use assignment or value-initialization instead [-Wclass-memaccess] 273 | memset(&m_ip6Address, 0, sizeof(IPv6Address)); @@ -1040,54 +1089,40 @@ /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/HostAddress_p.h:31:8: note: 'struct BamTools::Internal::IPv6Address' declared here 31 | struct IPv6Address | ^~~~~~~~~~~ -[ 69%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/io/RollingBuffer_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/io/RollingBuffer_p.cpp -[ 70%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/utils/BamException_p.cpp.o +[ 76%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/sam/SamHeaderValidator_p.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/sam/SamHeaderValidator_p.cpp +[ 77%] Building CXX object src/api/CMakeFiles/BamTools_static.dir/internal/utils/BamException_p.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools_static.dir/internal/utils/BamException_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/utils/BamException_p.cpp -[ 71%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/io/TcpSocket_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE 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CMakeFiles/BamTools.dir/internal/sam/SamFormatPrinter_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/sam/SamFormatPrinter_p.cpp -[ 76%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/api && /usr/bin/c++ -DBAMTOOLS_API_LIBRARY -DBamTools_EXPORTS -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wall -o CMakeFiles/BamTools.dir/internal/sam/SamHeaderValidator_p.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/api/internal/sam/SamHeaderValidator_p.cpp -[ 77%] Building CXX object src/api/CMakeFiles/BamTools.dir/internal/utils/BamException_p.cpp.o -cd 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CMakeFiles/BamTools_static.dir/BamWriter.cpp.o CMakeFiles/BamTools_static.dir/SamHeader.cpp.o CMakeFiles/BamTools_static.dir/SamProgram.cpp.o CMakeFiles/BamTools_static.dir/SamProgramChain.cpp.o CMakeFiles/BamTools_static.dir/SamReadGroup.cpp.o CMakeFiles/BamTools_static.dir/SamReadGroupDictionary.cpp.o CMakeFiles/BamTools_static.dir/SamSequence.cpp.o CMakeFiles/BamTools_static.dir/SamSequenceDictionary.cpp.o CMakeFiles/BamTools_static.dir/internal/bam/BamHeader_p.cpp.o CMakeFiles/BamTools_static.dir/internal/bam/BamMultiReader_p.cpp.o CMakeFiles/BamTools_static.dir/internal/bam/BamRandomAccessController_p.cpp.o CMakeFiles/BamTools_static.dir/internal/bam/BamReader_p.cpp.o CMakeFiles/BamTools_static.dir/internal/bam/BamWriter_p.cpp.o CMakeFiles/BamTools_static.dir/internal/index/BamIndexFactory_p.cpp.o CMakeFiles/BamTools_static.dir/internal/index/BamStandardIndex_p.cpp.o CMakeFiles/BamTools_static.dir/internal/index/BamToolsIndex_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/BamDeviceFactory_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/BamFile_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/BamFtp_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/BamHttp_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/BamPipe_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/BgzfStream_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/ByteArray_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/HostAddress_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/HostInfo_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/HttpHeader_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/ILocalIODevice_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/RollingBuffer_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/TcpSocket_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_p.cpp.o CMakeFiles/BamTools_static.dir/internal/io/TcpSocketEngine_unix_p.cpp.o CMakeFiles/BamTools_static.dir/internal/sam/SamFormatParser_p.cpp.o CMakeFiles/BamTools_static.dir/internal/sam/SamFormatPrinter_p.cpp.o CMakeFiles/BamTools_static.dir/internal/sam/SamHeaderValidator_p.cpp.o CMakeFiles/BamTools_static.dir/internal/utils/BamException_p.cpp.o make[3]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target BamTools make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/depend make[3]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/bamtools-2.5.1+dfsg /build/reproducible-path/bamtools-2.5.1+dfsg/src/utils /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils 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Scanning dependencies of target BamTools-utils make[3]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' make -f src/utils/CMakeFiles/BamTools-utils.dir/build.make src/utils/CMakeFiles/BamTools-utils.dir/build make[3]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' -[ 80%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o -c 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src/utils/CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o +[ 82%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o +[ 83%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools-utils.dir/bamtools_fasta.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/utils/bamtools_fasta.cpp -[ 83%] Building CXX object src/utils/CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools-utils.dir/bamtools_options.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/utils/bamtools_options.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools-utils.dir/bamtools_pileup_engine.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/utils/bamtools_pileup_engine.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils && /usr/bin/c++ -DBAMTOOLS_UTILS_LIBRARY -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/BamTools-utils.dir/bamtools_utilities.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/utils/bamtools_utilities.cpp +make[3]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' +[ 83%] Built target BamTools_static [ 84%] Linking CXX static library libbamtools-utils.a cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils && /usr/bin/cmake -P CMakeFiles/BamTools-utils.dir/cmake_clean_target.cmake cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/BamTools-utils.dir/link.txt --verbose=1 @@ -1104,29 +1139,29 @@ make[3]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' make -f src/toolkit/CMakeFiles/bamtools_cmd.dir/build.make src/toolkit/CMakeFiles/bamtools_cmd.dir/build make[3]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' -[ 85%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o -[ 86%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o -cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_count.cpp -[ 87%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o -[ 88%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o -[ 89%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o -[ 90%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o +[ 85%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o +[ 87%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o +[ 87%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o +[ 88%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o +[ 89%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o +[ 90%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_convert.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_convert.cpp +cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_count.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_count.cpp [ 91%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o -[ 92%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o -[ 93%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_coverage.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_coverage.cpp -[ 94%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o -[ 95%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o -[ 96%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o +[ 93%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o +[ 93%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_filter.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_filter.cpp -[ 97%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o -[ 98%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o +[ 94%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o +[ 95%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_header.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_header.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_index.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_index.cpp +[ 96%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_merge.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_merge.cpp +[ 97%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools_stats.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_random.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_random.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_resolve.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_resolve.cpp +[ 98%] Building CXX object src/toolkit/CMakeFiles/bamtools_cmd.dir/bamtools.cpp.o cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_revert.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_revert.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_sort.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_sort.cpp cd /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit && /usr/bin/c++ -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I/build/reproducible-path/bamtools-2.5.1+dfsg/src -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/api -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/utils -I/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu/src/toolkit -I/build/reproducible-path/bamtools-2.5.1+dfsg/src/third_party/jsoncpp -g -O2 -fdebug-prefix-map=/build/reproducible-path/bamtools-2.5.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -o CMakeFiles/bamtools_cmd.dir/bamtools_split.cpp.o -c /build/reproducible-path/bamtools-2.5.1+dfsg/src/toolkit/bamtools_split.cpp @@ -1144,25 +1179,25 @@ make[1]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg' cd obj-* && ln -s src/toolkit/ bin dh_auto_test --arch - cd obj-x86_64-linux-gnu && make -j20 test ARGS\+=-j20 + cd obj-x86_64-linux-gnu && make -j42 test ARGS\+=-j42 make[2]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' Running tests... -/usr/bin/ctest --force-new-ctest-process -j20 +/usr/bin/ctest --force-new-ctest-process -j42 Test project /build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu Start 1: bamtools_help Start 2: bamtools_stats -1/2 Test #1: bamtools_help .................... Passed 0.01 sec -2/2 Test #2: bamtools_stats ................... Passed 0.01 sec +1/2 Test #1: bamtools_help .................... Passed 0.00 sec +2/2 Test #2: bamtools_stats ................... Passed 0.00 sec 100% tests passed, 0 tests failed out of 2 -Total Test time (real) = 0.03 sec +Total Test time (real) = 0.01 sec make[2]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/bamtools-2.5.1+dfsg' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install -Nlibbamtools-doc - cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/bamtools-2.5.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/bamtools-2.5.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/bamtools-2.5.1+dfsg -B/build/reproducible-path/bamtools-2.5.1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -1249,12 +1284,12 @@ dpkg-gencontrol: warning: package libbamtools-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'bamtools-dbgsym' in '../bamtools-dbgsym_2.5.1+dfsg-9_amd64.deb'. -dpkg-deb: building package 'libbamtools2.5.1' in '../libbamtools2.5.1_2.5.1+dfsg-9_amd64.deb'. -dpkg-deb: building package 'libbamtools-doc' in '../libbamtools-doc_2.5.1+dfsg-9_all.deb'. dpkg-deb: building package 'libbamtools2.5.1-dbgsym' in '../libbamtools2.5.1-dbgsym_2.5.1+dfsg-9_amd64.deb'. -dpkg-deb: building package 'bamtools' in '../bamtools_2.5.1+dfsg-9_amd64.deb'. +dpkg-deb: building package 'libbamtools-doc' in '../libbamtools-doc_2.5.1+dfsg-9_all.deb'. +dpkg-deb: building package 'bamtools-dbgsym' in '../bamtools-dbgsym_2.5.1+dfsg-9_amd64.deb'. dpkg-deb: building package 'libbamtools-dev' in '../libbamtools-dev_2.5.1+dfsg-9_amd64.deb'. +dpkg-deb: building package 'bamtools' in '../bamtools_2.5.1+dfsg-9_amd64.deb'. +dpkg-deb: building package 'libbamtools2.5.1' in '../libbamtools2.5.1_2.5.1+dfsg-9_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../bamtools_2.5.1+dfsg-9_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -1262,12 +1297,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1883586/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/1041056 and its subdirectories -I: Current time: Wed Aug 7 05:44:23 -12 2024 -I: pbuilder-time-stamp: 1723052663 +I: removing directory /srv/workspace/pbuilder/1883586 and its subdirectories +I: Current time: Wed Sep 10 14:08:28 +14 2025 +I: pbuilder-time-stamp: 1757462908