Diff of the two buildlogs: -- --- b1/build.log 2024-07-22 18:13:01.705853410 +0000 +++ b2/build.log 2024-07-22 18:14:17.194650170 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Jul 22 06:09:08 -12 2024 -I: pbuilder-time-stamp: 1721671748 +I: Current time: Mon Aug 25 14:36:03 +14 2025 +I: pbuilder-time-stamp: 1756082163 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +17,8 @@ I: copying [./kineticstools_0.6.1+git20200729.e3723e0+dfsg-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.7rTVq6zT/trustedkeys.kbx': General error -gpgv: Signature made Wed Nov 25 10:44:52 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.VJaLvh4I/trustedkeys.kbx': General error +gpgv: Signature made Thu Nov 26 12:44:52 2020 +14 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./kineticstools_0.6.1+git20200729.e3723e0+dfsg-1.dsc @@ -36,135 +36,166 @@ dpkg-source: info: applying specify-link-args.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2247236/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/D01_modify_environment starting +debug: Running on ionos5-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 25 14:36 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=20 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=42 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='b424bab781e349b1a22c50c6162add6f' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2247236' - PS1='# ' - PS2='> ' + INVOCATION_ID=caecf60415a2466e9717e09c55aec0d0 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3914001 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.EnAZmhE0/pbuilderrc_uTqu --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.EnAZmhE0/b1 --logfile b1/build.log kineticstools_0.6.1+git20200729.e3723e0+dfsg-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.EnAZmhE0/pbuilderrc_P0gg --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.EnAZmhE0/b2 --logfile b2/build.log kineticstools_0.6.1+git20200729.e3723e0+dfsg-1.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.9.7+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1~bpo12+1 (2024-07-03) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Mar 27 22:09 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 69032 Mar 27 22:09 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Mar 27 22:09 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Mar 27 22:09 more - -rwsr-xr-x 1 root root 55528 Mar 27 22:09 mount - -rwxr-xr-x 1 root root 18664 Mar 27 22:09 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jul 6 21:26 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Mar 27 22:09 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Jan 19 2024 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Mar 27 22:09 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Mar 27 22:09 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/2247236/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Mar 28 2022 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Mar 29 2024 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 69032 Mar 29 2024 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98048 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Mar 29 2024 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Mar 29 2024 more + -rwsr-xr-x 1 root root 55528 Mar 29 2024 mount + -rwxr-xr-x 1 root root 18664 Mar 29 2024 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Dec 17 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Mar 28 2022 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 9 Aug 25 14:36 sh -> /bin/bash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Mar 29 2024 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Jan 20 2024 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Mar 29 2024 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Mar 29 2024 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -360,7 +391,7 @@ Get: 132 http://deb.debian.org/debian bullseye/main amd64 python3-pytest-xdist all 2.2.0-1 [43.5 kB] Get: 133 http://deb.debian.org/debian bullseye/main amd64 python3-scipy amd64 1.6.0-2 [12.3 MB] Get: 134 http://deb.debian.org/debian bullseye/main amd64 python3-uritools all 3.0.0-2 [28.0 kB] -Fetched 59.1 MB in 23s (2590 kB/s) +Fetched 59.1 MB in 5s (10.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19711 files and directories currently installed.) @@ -938,7 +969,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../kineticstools_0.6.1+git20200729.e3723e0+dfsg-1_source.changes +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../kineticstools_0.6.1+git20200729.e3723e0+dfsg-1_source.changes dpkg-buildpackage: info: source package kineticstools dpkg-buildpackage: info: source version 0.6.1+git20200729.e3723e0+dfsg-1 dpkg-buildpackage: info: source distribution unstable @@ -974,29 +1009,29 @@ running build running build_py creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/ModificationDecode.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/ReferenceUtils.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/summarizeModifications.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/loader.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools copying kineticsTools/pipelineTools.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/ResultWriter.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools copying kineticsTools/ipdSummary.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/ModificationDecode.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/ipdModel.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/WorkerProcess.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/MedakaLdaEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools copying kineticsTools/sharedArray.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/summarizeModifications.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/MixtureEstimationMethods.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools copying kineticsTools/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/MultiSiteDetection.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/KineticWorker.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/ReferenceUtils.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/WorkerProcess.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/MixtureEstimationMethods.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools copying kineticsTools/PositiveControlEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/loader.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/ResultWriter.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -copying kineticsTools/BasicLdaEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools copying kineticsTools/MultiSiteCommon.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools -creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/internal -copying kineticsTools/internal/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/internal +copying kineticsTools/MedakaLdaEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/KineticWorker.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/ipdModel.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/MultiSiteDetection.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools +copying kineticsTools/BasicLdaEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks copying kineticsTools/tasks/gather_bigwig.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks copying kineticsTools/tasks/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks +creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/internal +copying kineticsTools/internal/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/internal running egg_info creating kineticsTools.egg-info writing kineticsTools.egg-info/PKG-INFO @@ -1030,8 +1065,8 @@ platform linux -- Python 3.9.2, pytest-6.0.2, py-1.10.0, pluggy-0.13.0 -- /usr/bin/python3.9 cachedir: .pytest_cache rootdir: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg, configfile: pytest.ini -plugins: forked-1.3.0, xdist-2.2.0 -gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I +plugins: xdist-2.2.0, forked-1.3.0 +gw0 I / gw1 I / gw2 I / gw3 I / gw4 I / gw5 I / gw6 I / gw7 I / gw8 I / gw9 I / gw10 I / gw11 I / gw12 I / gw13 I / gw14 I / gw15 I / gw16 I / gw17 I / gw18 I / gw19 I / gw20 I / gw21 I / gw22 I / gw23 I / gw24 I / gw25 I / gw26 I / gw27 I / gw28 I / gw29 I / gw30 I / gw31 I / gw32 I / gw33 I / gw34 I / gw35 I / gw36 I / gw37 I / gw38 I / gw39 I / gw40 I / gw41 I [gw0] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build [gw1] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build [gw2] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build @@ -1052,11 +1087,33 @@ [gw17] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build [gw18] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build [gw19] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw20] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw21] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw22] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw23] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw24] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw25] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw26] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw27] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw28] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw29] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw30] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw31] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw32] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw33] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw34] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw35] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw36] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw37] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw38] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw39] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw40] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build + [gw41] linux Python 3.9.2 cwd: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build [gw0] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] - [gw1] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] - [gw3] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw2] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw1] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw4] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw3] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw5] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw6] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw7] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] @@ -1067,53 +1124,75 @@ [gw12] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw13] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw14] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] - [gw16] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw15] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] - [gw18] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] - [gw17] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw16] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] [gw19] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] -gw0 [19] / gw1 [19] / gw2 [19] / gw3 [19] / gw4 [19] / gw5 [19] / gw6 [19] / gw7 [19] / gw8 [19] / gw9 [19] / gw10 [19] / gw11 [19] / gw12 [19] / gw13 [19] / gw14 [19] / gw15 [19] / gw16 [19] / gw17 [19] / gw18 [19] / gw19 [19] + [gw17] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw18] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw20] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw21] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw22] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw23] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw26] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw24] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw25] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw27] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw28] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw29] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw31] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw32] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw30] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw33] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw34] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw35] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw36] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw37] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw38] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw39] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw41] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] + [gw40] Python 3.9.2 (default, Feb 28 2021, 17:03:44) -- [GCC 10.2.1 20210110] +gw0 [19] / gw1 [19] / gw2 [19] / gw3 [19] / gw4 [19] / gw5 [19] / gw6 [19] / gw7 [19] / gw8 [19] / gw9 [19] / gw10 [19] / gw11 [19] / gw12 [19] / gw13 [19] / gw14 [19] / gw15 [19] / gw16 [19] / gw17 [19] / gw18 [19] / gw19 [19] / gw20 [19] / gw21 [19] / gw22 [19] / gw23 [19] / gw24 [19] / gw25 [19] / gw26 [19] / gw27 [19] / gw28 [19] / gw29 [19] / gw30 [19] / gw31 [19] / gw32 [19] / gw33 [19] / gw34 [19] / gw35 [19] / gw36 [19] / gw37 [19] / gw38 [19] / gw39 [19] / gw40 [19] / gw41 [19] scheduling tests via LoadScopeScheduling -test/test_gather_bigwig.py::TestGatherBigwig::test_gather_bigwig -test/test_integration.py::TestKineticsTools::test_help test/test_ipdModel.py::TestIpdModel::test_refLength -test/test_summarize_modifications.py::TestSummarizeModifications::test_integration -[gw6] [ 5%] SKIPPED test/test_summarize_modifications.py::TestSummarizeModifications::test_integration -[gw2] [ 10%] SKIPPED test/test_ipdModel.py::TestIpdModel::test_refLength -test/test_ipdModel.py::TestIpdModel::test_snippetFunc -[gw2] [ 15%] SKIPPED test/test_ipdModel.py::TestIpdModel::test_snippetFunc -test/test_ipdModel.py::TestIpdModel::test_getReferenceWindow -[gw2] [ 21%] SKIPPED test/test_ipdModel.py::TestIpdModel::test_getReferenceWindow +test/test_integration.py::TestKineticsTools::test_help test/test_loader.py::test_basic -[gw4] [ 26%] PASSED test/test_loader.py::test_basic -test/test_loader.py::test_path -[gw4] [ 31%] PASSED test/test_loader.py::test_path -test/test_loader.py::test_path_with_prefixed_chem +[gw3] [ 5%] PASSED test/test_loader.py::test_basic test/test_ReferenceUtils.py::TestReferenceUtils::test_bam -[gw0] [ 36%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_bam +[gw0] [ 10%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_bam test/test_ReferenceUtils.py::TestReferenceUtils::test_dataset -[gw0] [ 42%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_dataset +[gw0] [ 15%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_dataset test/test_ReferenceUtils.py::TestReferenceUtils::test_parseReferenceWindow -[gw0] [ 47%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_parseReferenceWindow +[gw0] [ 21%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_parseReferenceWindow test/test_ReferenceUtils.py::TestReferenceUtils::test_createReferenceWindows -[gw0] [ 52%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_createReferenceWindows +[gw0] [ 26%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_createReferenceWindows test/test_ReferenceUtils.py::TestReferenceUtils::test_enumerateChunks -[gw0] [ 57%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_enumerateChunks -[gw4] [ 63%] PASSED test/test_loader.py::test_path_with_prefixed_chem -test/test_loader.py::test_getResourcePathSpec -[gw4] [ 68%] PASSED test/test_loader.py::test_getResourcePathSpec -[gw1] [ 73%] SKIPPED test/test_gather_bigwig.py::TestGatherBigwig::test_gather_bigwig +[gw0] [ 31%] SKIPPED test/test_ReferenceUtils.py::TestReferenceUtils::test_enumerateChunks +test/test_summarize_modifications.py::TestSummarizeModifications::test_integration +[gw6] [ 36%] SKIPPED test/test_summarize_modifications.py::TestSummarizeModifications::test_integration +test/test_gather_bigwig.py::TestGatherBigwig::test_gather_bigwig +[gw2] [ 42%] SKIPPED test/test_gather_bigwig.py::TestGatherBigwig::test_gather_bigwig test/test_gather_bigwig.py::TestGatherBigwig::test_gather_bigwig_cli -[gw1] [ 78%] SKIPPED test/test_gather_bigwig.py::TestGatherBigwig::test_gather_bigwig_cli +[gw2] [ 47%] SKIPPED test/test_gather_bigwig.py::TestGatherBigwig::test_gather_bigwig_cli +test/test_loader.py::test_path +[gw3] [ 52%] PASSED test/test_loader.py::test_path +test/test_loader.py::test_path_with_prefixed_chem +[gw3] [ 57%] PASSED test/test_loader.py::test_path_with_prefixed_chem +test/test_loader.py::test_getResourcePathSpec +[gw3] [ 63%] PASSED test/test_loader.py::test_getResourcePathSpec +[gw4] [ 68%] SKIPPED test/test_ipdModel.py::TestIpdModel::test_refLength +test/test_ipdModel.py::TestIpdModel::test_snippetFunc +[gw4] [ 73%] SKIPPED test/test_ipdModel.py::TestIpdModel::test_snippetFunc +test/test_ipdModel.py::TestIpdModel::test_getReferenceWindow +[gw4] [ 78%] SKIPPED test/test_ipdModel.py::TestIpdModel::test_getReferenceWindow test/test_outputs.py::TestOutputs::test_csv_output [gw5] [ 84%] SKIPPED test/test_outputs.py::TestOutputs::test_csv_output test/test_outputs.py::TestOutputs::test_bigwig [gw5] [ 89%] SKIPPED test/test_outputs.py::TestOutputs::test_bigwig -[gw3] [ 94%] PASSED test/test_integration.py::TestKineticsTools::test_help +[gw1] [ 94%] PASSED test/test_integration.py::TestKineticsTools::test_help test/test_integration.py::TestKineticsTools::test_ecoli_first_50k -[gw3] [100%] SKIPPED test/test_integration.py::TestKineticsTools::test_ecoli_first_50k +[gw1] [100%] SKIPPED test/test_integration.py::TestKineticsTools::test_ecoli_first_50k =============================== warnings summary =============================== /usr/lib/python3/dist-packages/_pytest/junitxml.py:446 @@ -1122,17 +1201,17 @@ for more information. _issue_warning_captured(deprecated.JUNIT_XML_DEFAULT_FAMILY, config.hook, 2) -/usr/lib/python3/dist-packages/avro/schema.py:1249: 100 warnings +/usr/lib/python3/dist-packages/avro/schema.py:1249: 210 warnings /usr/lib/python3/dist-packages/avro/schema.py:1249: DeprecationWarning: `Parse` is deprecated in avro 1.10. Please use `parse` (lowercase) instead. warnings.warn("`Parse` is deprecated in avro 1.10. " -- Docs: https://docs.pytest.org/en/stable/warnings.html - generated xml file: /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/nosetests.xml - ============================= slowest 20 durations ============================= -1.61s call .pybuild/cpython3_3.9_kineticstools/build/test/test_integration.py::TestKineticsTools::test_help +0.54s call .pybuild/cpython3_3.9_kineticstools/build/test/test_integration.py::TestKineticsTools::test_help (19 durations < 0.005s hidden. Use -vv to show these durations.) -================= 5 passed, 14 skipped, 101 warnings in 4.83s ================== +================= 5 passed, 14 skipped, 211 warnings in 2.77s ================== make[1]: Leaving directory '/build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild @@ -1160,67 +1239,67 @@ creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9 creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/nosetests.xml -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ModificationDecode.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ReferenceUtils.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/summarizeModifications.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tree_predict.cpython-39-x86_64-linux-gnu.so -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/loader.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/pipelineTools.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ResultWriter.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ipdSummary.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/gather_bigwig.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks +creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__ +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__pycache__/gather_bigwig.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__ +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__ +creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/SP3-C3.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/unknown.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/P6-C4.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/SP2-C2.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/sharedArray.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/WorkerProcess.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/internal copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/internal/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/internal +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MixtureEstimationMethods.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/PositiveControlEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MultiSiteCommon.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MedakaLdaEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/KineticWorker.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/sharedArray.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/loader.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/ReferenceUtils.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/loader.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ +copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/sharedArray.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__pycache__/ipdModel.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__pycache__ -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ipdSummary.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/SP2-C2.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/unknown.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/P6-C4.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/resources/SP3-C3.npz.gz -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/resources -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ModificationDecode.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ipdModel.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/WorkerProcess.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MedakaLdaEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/sharedArray.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/summarizeModifications.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MixtureEstimationMethods.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MultiSiteDetection.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/KineticWorker.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ReferenceUtils.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks -creating /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__ -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__pycache__/gather_bigwig.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__ -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__pycache__ -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/gather_bigwig.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tasks/__init__.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/PositiveControlEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/tree_predict.cpython-39-x86_64-linux-gnu.so -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/loader.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/ResultWriter.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/BasicLdaEnricher.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/kineticsTools/MultiSiteCommon.py -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools -copying /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/.pybuild/cpython3_3.9_kineticstools/build/nosetests.xml -> /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/pipelineTools.py to pipelineTools.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/internal/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ipdSummary.py to ipdSummary.cpython-39.pyc byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ModificationDecode.py to ModificationDecode.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ipdModel.py to ipdModel.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/WorkerProcess.py to WorkerProcess.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MedakaLdaEnricher.py to MedakaLdaEnricher.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/sharedArray.py to sharedArray.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/summarizeModifications.py to summarizeModifications.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MixtureEstimationMethods.py to MixtureEstimationMethods.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__init__.py to __init__.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MultiSiteDetection.py to MultiSiteDetection.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/KineticWorker.py to KineticWorker.cpython-39.pyc byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ReferenceUtils.py to ReferenceUtils.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/summarizeModifications.py to summarizeModifications.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/loader.py to loader.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/pipelineTools.py to pipelineTools.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ResultWriter.py to ResultWriter.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ipdSummary.py to ipdSummary.cpython-39.pyc byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/gather_bigwig.py to gather_bigwig.cpython-39.pyc byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/tasks/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/sharedArray.py to sharedArray.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/WorkerProcess.py to WorkerProcess.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/internal/__init__.py to __init__.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MixtureEstimationMethods.py to MixtureEstimationMethods.cpython-39.pyc byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/PositiveControlEnricher.py to PositiveControlEnricher.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/loader.py to loader.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ResultWriter.py to ResultWriter.cpython-39.pyc -byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/BasicLdaEnricher.py to BasicLdaEnricher.cpython-39.pyc byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MultiSiteCommon.py to MultiSiteCommon.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MedakaLdaEnricher.py to MedakaLdaEnricher.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/KineticWorker.py to KineticWorker.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/ipdModel.py to ipdModel.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/MultiSiteDetection.py to MultiSiteDetection.cpython-39.pyc +byte-compiling /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools/BasicLdaEnricher.py to BasicLdaEnricher.cpython-39.pyc running install_egg_info Copying kineticsTools.egg-info to /build/reproducible-path/kineticstools-0.6.1+git20200729.e3723e0+dfsg/debian/python3-kineticstools/usr/lib/python3.9/dist-packages/kineticsTools-0.7.0.egg-info Skipping SOURCES.txt @@ -1270,8 +1349,8 @@ dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'kineticstools' in '../kineticstools_0.6.1+git20200729.e3723e0+dfsg-1_all.deb'. -dpkg-deb: building package 'python3-kineticstools' in '../python3-kineticstools_0.6.1+git20200729.e3723e0+dfsg-1_amd64.deb'. dpkg-deb: building package 'kineticstools-data' in '../kineticstools-data_0.6.1+git20200729.e3723e0+dfsg-1_all.deb'. +dpkg-deb: building package 'python3-kineticstools' in '../python3-kineticstools_0.6.1+git20200729.e3723e0+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-kineticstools-dbgsym' in '../python3-kineticstools-dbgsym_0.6.1+git20200729.e3723e0+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../kineticstools_0.6.1+git20200729.e3723e0+dfsg-1_amd64.changes @@ -1280,12 +1359,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3914001/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2247236 and its subdirectories -I: Current time: Mon Jul 22 06:13:00 -12 2024 -I: pbuilder-time-stamp: 1721671980 +I: removing directory /srv/workspace/pbuilder/3914001 and its subdirectories +I: Current time: Mon Aug 25 14:37:14 +14 2025 +I: pbuilder-time-stamp: 1756082234