Diff of the two buildlogs: -- --- b1/build.log 2023-08-04 17:15:58.050055588 +0000 +++ b2/build.log 2023-08-04 17:17:17.151350433 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Aug 4 05:06:49 -12 2023 -I: pbuilder-time-stamp: 1691168809 +I: Current time: Fri Sep 6 13:39:01 +14 2024 +I: pbuilder-time-stamp: 1725579541 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +17,8 @@ I: copying [./ltrsift_1.0.2-9.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.QrYpzvA6/trustedkeys.kbx': General error -gpgv: Signature made Sat Apr 18 00:11:46 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.Z4HOU5Or/trustedkeys.kbx': General error +gpgv: Signature made Sun Apr 19 02:11:46 2020 +14 gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ltrsift_1.0.2-9.dsc @@ -31,135 +31,166 @@ dpkg-source: info: applying spelling.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/906316/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Sep 6 13:39 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='b24a11e96a3a431687e3ba457ec9bcbd' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='906316' - PS1='# ' - PS2='> ' + INVOCATION_ID=3ec41975f759436da089867f947d9d66 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1518073 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zndWWff0/pbuilderrc_vbF9 --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zndWWff0/b1 --logfile b1/build.log ltrsift_1.0.2-9.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zndWWff0/pbuilderrc_vcA7 --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zndWWff0/b2 --logfile b2/build.log ltrsift_1.0.2-9.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos11-amd64 6.1.0-10-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.38-2 (2023-07-27) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-10-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.38-2 (2023-07-27) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Jan 20 2022 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 69032 Jan 20 2022 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Jan 20 2022 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Jan 20 2022 more - -rwsr-xr-x 1 root root 55528 Jan 20 2022 mount - -rwxr-xr-x 1 root root 18664 Jan 20 2022 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Jul 6 21:25 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Jan 20 2022 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Jan 20 2022 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Jan 20 2022 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/906316/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Mar 28 2022 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Jan 21 2022 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 69032 Jan 21 2022 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98048 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Jan 21 2022 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Jan 21 2022 more + -rwsr-xr-x 1 root root 55528 Jan 21 2022 mount + -rwxr-xr-x 1 root root 18664 Jan 21 2022 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Dec 17 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Mar 28 2022 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 9 Sep 6 13:39 sh -> /bin/bash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Jan 21 2022 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Jan 21 2022 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Jan 21 2022 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -398,7 +429,7 @@ Get: 195 http://deb.debian.org/debian bullseye/main amd64 libxdamage-dev amd64 1:1.1.5-2 [15.6 kB] Get: 196 http://deb.debian.org/debian bullseye/main amd64 libxml2-utils amd64 2.9.10+dfsg-6.7+deb11u4 [109 kB] Get: 197 http://deb.debian.org/debian bullseye/main amd64 libgtk2.0-dev amd64 2.24.33-2 [827 kB] -Fetched 84.9 MB in 9s (9954 kB/s) +Fetched 84.9 MB in 2s (37.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19707 files and directories currently installed.) @@ -1215,7 +1246,11 @@ fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/ltrsift-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ltrsift_1.0.2-9_source.changes +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/ltrsift-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ltrsift_1.0.2-9_source.changes dpkg-buildpackage: info: source package ltrsift dpkg-buildpackage: info: source version 1.0.2-9 dpkg-buildpackage: info: source distribution unstable @@ -1241,32 +1276,32 @@ debian/rules override_dh_auto_build make[1]: Entering directory '/build/ltrsift-1.0.2' dh_auto_build -- x32=no 64bit=yes errorcheck=no - make -j15 "INSTALL=install --strip-program=true" x32=no 64bit=yes errorcheck=no + make -j16 "INSTALL=install --strip-program=true" x32=no 64bit=yes errorcheck=no make[2]: Entering directory '/build/ltrsift-1.0.2' +[create bin] +[create obj] +[create obj/src] +test -d bin || mkdir -p bin +test -d obj || mkdir -p obj +test -d obj/src || mkdir -p obj/src [compile obj/src/default_style.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/default_style.c -o obj/src/default_style.o [compile obj/src/error.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/error.c -o obj/src/error.o [compile obj/src/gtk_blastn_params.o] [compile obj/src/gtk_blastn_params_refseq.o] +[compile obj/src/gtk_label_close.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_blastn_params.c -o obj/src/gtk_blastn_params.o cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_blastn_params_refseq.c -o obj/src/gtk_blastn_params_refseq.o -[compile obj/src/gtk_label_close.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_label_close.c -o obj/src/gtk_label_close.o [compile obj/src/gtk_ltr_assistant.o] -[compile obj/src/gtk_ltr_families.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_assistant.c -o obj/src/gtk_ltr_assistant.o -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_families.c -o obj/src/gtk_ltr_families.o -[create obj/src] +[compile obj/src/gtk_ltr_families.o] [compile obj/src/gtk_ltr_filter.o] -test -d obj/src || mkdir -p obj/src -[create bin] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_families.c -o obj/src/gtk_ltr_families.o cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_ltr_filter.c -o obj/src/gtk_ltr_filter.o -[create obj] -test -d bin || mkdir -p bin -test -d obj || mkdir -p obj -[compile obj/src/menubar.o] [compile obj/src/gtk_project_settings.o] +[compile obj/src/menubar.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/gtk_project_settings.c -o obj/src/gtk_project_settings.o [compile obj/src/preprocess_stream.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/menubar.c -o obj/src/menubar.o @@ -1274,11 +1309,19 @@ [compile obj/src/preprocess_visitor.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/preprocess_visitor.c -o obj/src/preprocess_visitor.o [compile obj/src/project_wizard.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/project_wizard.c -o obj/src/project_wizard.o [compile obj/src/script_filter_stream.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/project_wizard.c -o obj/src/project_wizard.o cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/script_filter_stream.c -o obj/src/script_filter_stream.o [compile obj/src/statusbar.o] +[compile obj/src/support.o] cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/statusbar.c -o obj/src/statusbar.o +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/support.c -o obj/src/support.o +[compile obj/src/ltrsift.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift.c -o obj/src/ltrsift.o +[compile obj/src/ltrsift_encode.o] +cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift_encode.c -o obj/src/ltrsift_encode.o +[linking bin/ltrsift_encode] +cc obj/src/ltrsift_encode.o -o bin/ltrsift_encode -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wl,-z,relro -Wl,-z,now -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, @@ -1287,16 +1330,37 @@ from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/gtk_blastn_params_refseq.h:24, - from src/gtk_blastn_params_refseq.c:19: + from src/gtk_ltr_assistant.h:24, + from src/gtk_ltr_assistant.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ In file included from /usr/include/glib-2.0/gobject/gobject.h:24, from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, - from src/gtk_blastn_params_refseq.h:23, - from src/gtk_blastn_params_refseq.c:19: + from src/gtk_ltr_assistant.h:23, + from src/gtk_ltr_assistant.c:20: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/gtk_blastn_params.h:24, + from src/gtk_blastn_params.c:19: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, + from /usr/include/glib-2.0/glib-object.h:22, + from src/gtk_blastn_params.h:23, + from src/gtk_blastn_params.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1310,7 +1374,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/error.c:19: + from src/gtk_ltr_filter.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1325,26 +1389,39 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/error.c:19: + from src/gtk_ltr_filter.c:19: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/ltrsift.h:22, + from src/error.h:22, + from src/gtk_project_settings.c:20: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, + from /usr/include/glib-2.0/glib-object.h:22, + from /usr/include/glib-2.0/gio/gioenums.h:28, + from /usr/include/glib-2.0/gio/giotypes.h:28, + from /usr/include/glib-2.0/gio/gio.h:26, + from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, + from /usr/include/gtk-2.0/gdk/gdk.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:32, + from src/ltrsift.h:22, + from src/error.h:22, + from src/gtk_project_settings.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/gtk_blastn_params_refseq.h:24, - from src/gtk_blastn_params_refseq.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from src/gtk_blastn_params_refseq.h:22, - from src/gtk_blastn_params_refseq.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, @@ -1376,7 +1453,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_project_settings.c:20: + from src/error.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1391,26 +1468,47 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_project_settings.c:20: + from src/error.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ -[compile obj/src/support.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/support.c -o obj/src/support.o -[compile obj/src/ltrsift.o] -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/gtk_blastn_params_refseq.h:24, + from src/gtk_blastn_params_refseq.c:19: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, + from /usr/include/glib-2.0/glib-object.h:22, + from src/gtk_blastn_params_refseq.h:23, + from src/gtk_blastn_params_refseq.c:19: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/error.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from /usr/include/glib-2.0/gobject/gbinding.h:28, + from src/gtk_ltr_families.c:20: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1420,29 +1518,39 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/error.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift.c -o obj/src/ltrsift.o -[compile obj/src/ltrsift_encode.o] -cc -c -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wdate-time -D_FORTIFY_SOURCE=2 `pkg-config --cflags --libs gtk+-2.0 gthread-2.0` -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now src/ltrsift_encode.c -o obj/src/ltrsift_encode.o -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/gtk_label_close.h:24, - from src/gtk_label_close.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from src/gtk_label_close.h:22, - from src/gtk_label_close.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ + from src/gtk_ltr_families.c:20: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/ltrsift.h:22, + from src/statusbar.h:22, + from src/statusbar.c:20: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, + from /usr/include/glib-2.0/glib-object.h:22, + from /usr/include/glib-2.0/gio/gioenums.h:28, + from /usr/include/glib-2.0/gio/giotypes.h:28, + from /usr/include/glib-2.0/gio/gio.h:26, + from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, + from /usr/include/gtk-2.0/gdk/gdk.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:32, + from src/ltrsift.h:22, + from src/statusbar.h:22, + from src/statusbar.c:20: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, @@ -1453,7 +1561,21 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_families.c:20: + from src/project_wizard.c:19: +/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] + 236 | void gtk_type_init (GTypeDebugFlags debug_flags); + | ^~~~ +In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, + from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, + from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, + from /usr/include/gtk-2.0/gtk/gtkbin.h:35, + from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, + from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, + from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, + from /usr/include/gtk-2.0/gtk/gtk.h:33, + from src/ltrsift.h:22, + from src/error.h:22, + from src/menubar.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1468,7 +1590,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_families.c:20: + from src/project_wizard.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1476,15 +1598,13 @@ from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/ltrsift.h:22, - from src/error.h:22, - from src/gtk_project_settings.c:20: + from src/gtk_ltr_assistant.h:24, + from src/gtk_ltr_assistant.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from /usr/include/glib-2.0/gobject/gbinding.h:28, +In file included from /usr/include/glib-2.0/gobject/gobject.h:24, + from /usr/include/glib-2.0/gobject/gbinding.h:29, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1494,7 +1614,14 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_project_settings.c:20: + from src/menubar.c:20: +/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here + 679 | { + | ^ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from src/gtk_ltr_assistant.h:22, + from src/gtk_ltr_assistant.c:20: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ @@ -1508,7 +1635,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/support.c:20: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1523,7 +1650,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/support.c:20: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1536,8 +1663,8 @@ from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:33, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: + from src/error.h:22, + from src/ltrsift.c:19: /usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] 236 | void gtk_type_init (GTypeDebugFlags debug_flags); | ^~~~ @@ -1551,8 +1678,8 @@ from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: + from src/error.h:22, + from src/ltrsift.c:19: /usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here 679 | { | ^ @@ -1560,9 +1687,25 @@ from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/gtk_blastn_params.h:24, + from src/gtk_blastn_params.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from src/gtk_blastn_params.h:22, + from src/gtk_blastn_params.c:19: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_families.c:20: + from src/gtk_ltr_filter.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ @@ -1578,7 +1721,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_families.c:20: + from src/gtk_ltr_filter.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ @@ -1588,7 +1731,7 @@ from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/gtk_project_settings.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ @@ -1604,7 +1747,23 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: + from src/gtk_project_settings.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/gtk_label_close.h:24, + from src/gtk_label_close.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, + from src/gtk_label_close.h:22, + from src/gtk_label_close.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ @@ -1613,8 +1772,8 @@ from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: + from src/error.h:22, + from src/error.c:19: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ @@ -1629,75 +1788,39 @@ from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, - from src/statusbar.h:22, - from src/statusbar.c:20: + from src/error.h:22, + from src/error.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/gtk_blastn_params.h:24, - from src/gtk_blastn_params.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, - from /usr/include/glib-2.0/glib-object.h:22, - from src/gtk_blastn_params.h:23, - from src/gtk_blastn_params.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/gtk_ltr_assistant.h:24, - from src/gtk_ltr_assistant.c:20: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, - from /usr/include/glib-2.0/glib-object.h:22, - from src/gtk_ltr_assistant.h:23, - from src/gtk_ltr_assistant.c:20: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/gtk_blastn_params.h:24, - from src/gtk_blastn_params.c:19: + from src/gtk_blastn_params_refseq.h:24, + from src/gtk_blastn_params_refseq.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/error.h:22, + from src/gtk_ltr_families.c:20: /usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] 73 | GTimeVal last_popdown; | ^~~~~~~~ In file included from /usr/include/glib-2.0/glib/galloca.h:32, from /usr/include/glib-2.0/glib.h:30, - from src/gtk_blastn_params.h:22, - from src/gtk_blastn_params.c:19: + from src/gtk_blastn_params_refseq.h:22, + from src/gtk_blastn_params_refseq.c:19: /usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here 547 | struct _GTimeVal | ^~~~~~~~~ -[linking bin/ltrsift_encode] -src/gtk_ltr_families.c: In function 'gtk_ltr_families_refseq_match': -src/gtk_ltr_families.c:1551:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 1551 | if (!g_thread_create(refseq_match_cands_start, (gpointer) threaddata, FALSE, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1709,14 +1832,21 @@ from src/ltrsift.h:22, from src/error.h:22, from src/gtk_ltr_families.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/gtk_ltr_families.c: In function 'gtk_ltr_families_orffind': -src/gtk_ltr_families.c:1648:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 1648 | if (!g_thread_create(orffind_start, (gpointer) threaddata, FALSE, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/statusbar.h:22, + from src/statusbar.c:20: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1726,17 +1856,23 @@ from /usr/include/gtk-2.0/gdk/gdk.h:32, from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, + from src/statusbar.h:22, + from src/statusbar.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_families.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -cc obj/src/ltrsift_encode.o -o bin/ltrsift_encode -g -O2 -fdebug-prefix-map=/build/ltrsift-1.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -Wunused-parameter -O3 -Wl,-z,relro -Wl,-z,now -I/usr/include/genometools -I/usr/include/genometools -I/src -lgenometools -L/usr/lib -Wl,-z,relro -Wl,-z,now -src/menubar.c: In function 'first_save_and_reload': -src/menubar.c:875:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 875 | if (!g_thread_create(save_and_reload_data_start, (gpointer) threaddata, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, + from src/support.c:20: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1747,15 +1883,22 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/menubar.c: In function 'save_as_activate': -src/menubar.c:962:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 962 | if (!g_thread_create(save_as_start, (gpointer) threaddata, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, + from src/support.c:20: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/error.h:22, + from src/project_wizard.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1766,15 +1909,22 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, + from src/project_wizard.c:19: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/error.h:22, from src/menubar.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/menubar.c: In function 'menubar_save_activate': -src/menubar.c:996:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 996 | if (!g_thread_create(save_project_data_start, (gpointer) threaddata, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1786,14 +1936,21 @@ from src/ltrsift.h:22, from src/error.h:22, from src/menubar.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/menubar.c: In function 'open_activate': -src/menubar.c:1100:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 1100 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, - | ^~ -In file included from /usr/include/glib-2.0/glib.h:111, +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, + from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, + from /usr/include/gtk-2.0/gtk/gtk.h:126, + from src/ltrsift.h:22, + from src/error.h:22, + from src/ltrsift.c:19: +/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] + 73 | GTimeVal last_popdown; + | ^~~~~~~~ +In file included from /usr/include/glib-2.0/glib/galloca.h:32, + from /usr/include/glib-2.0/glib.h:30, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1804,14 +1961,17 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -src/menubar.c: In function 'open_recent_activated': -src/menubar.c:1283:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 1283 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, - | ^~ + from src/ltrsift.c:19: +/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here + 547 | struct _GTimeVal + | ^~~~~~~~~ +src/ltrsift.c: In function 'main': +src/ltrsift.c:309:13: warning: Deprecated pre-processor symbol + 309 | if (!g_thread_supported()) + | ^~~~~~~~~~~~~~~~ +src/ltrsift.c:310:5: warning: 'g_thread_init' is deprecated [-Wdeprecated-declarations] + 310 | g_thread_init(NULL); + | ^~~~~~~~~~~~~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, @@ -1823,26 +1983,16 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/menubar.c:20: -/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here - 100 | GThread *g_thread_create (GThreadFunc func, - | ^~~~~~~~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/ltrsift.h:22, - from src/error.h:22, - from src/gtk_ltr_filter.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, + from src/ltrsift.c:19: +/usr/include/glib-2.0/glib/deprecated/gthread.h:261:10: note: declared here + 261 | void g_thread_init (gpointer vtable); + | ^~~~~~~~~~~~~ +src/project_wizard.c: In function 'project_wizard_apply': +src/project_wizard.c:292:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 292 | if (!g_thread_create(project_wizard_start_job, (gpointer) threaddata, FALSE, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, + from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -1852,13 +2002,13 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_filter.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -src/gtk_ltr_families.c: In function 'notebook_toolbar_search_cand_group_clicked': -src/gtk_ltr_families.c:2873:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 2873 | if (!g_thread_create(classify_nodes_start, (gpointer) threaddata, FALSE, + from src/project_wizard.c:19: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +src/gtk_ltr_families.c: In function 'gtk_ltr_families_refseq_match': +src/gtk_ltr_families.c:1551:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 1551 | if (!g_thread_create(refseq_match_cands_start, (gpointer) threaddata, FALSE, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, @@ -1875,63 +2025,11 @@ /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/gtk_ltr_assistant.h:24, - from src/gtk_ltr_assistant.c:20: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, - from src/gtk_ltr_assistant.h:22, - from src/gtk_ltr_assistant.c:20: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/ltrsift.h:22, - from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, - from /usr/include/glib-2.0/glib-object.h:22, - from /usr/include/glib-2.0/gio/gioenums.h:28, - from /usr/include/glib-2.0/gio/giotypes.h:28, - from /usr/include/glib-2.0/gio/gio.h:26, - from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, - from /usr/include/gtk-2.0/gdk/gdk.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:32, - from src/ltrsift.h:22, - from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/ltrsift.h:22, - from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, +src/gtk_ltr_families.c: In function 'gtk_ltr_families_orffind': +src/gtk_ltr_families.c:1648:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 1648 | if (!g_thread_create(orffind_start, (gpointer) threaddata, FALSE, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1942,22 +2040,15 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/project_wizard.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/ltrsift.h:22, - from src/error.h:22, - from src/gtk_ltr_filter.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, + from src/gtk_ltr_families.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +src/menubar.c: In function 'first_save_and_reload': +src/menubar.c:875:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 875 | if (!g_thread_create(save_and_reload_data_start, (gpointer) threaddata, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -1968,55 +2059,16 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/gtk_ltr_filter.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/ltrsift.h:22, - from src/error.h:22, - from src/support.c:20: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, - from /usr/include/glib-2.0/glib-object.h:22, - from /usr/include/glib-2.0/gio/gioenums.h:28, - from /usr/include/glib-2.0/gio/giotypes.h:28, - from /usr/include/glib-2.0/gio/gio.h:26, - from /usr/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30, - from /usr/include/gtk-2.0/gdk/gdk.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:32, - from src/ltrsift.h:22, - from src/error.h:22, - from src/support.c:20: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -In file included from /usr/include/gtk-2.0/gtk/gtkobject.h:37, - from /usr/include/gtk-2.0/gtk/gtkwidget.h:36, - from /usr/include/gtk-2.0/gtk/gtkcontainer.h:35, - from /usr/include/gtk-2.0/gtk/gtkbin.h:35, - from /usr/include/gtk-2.0/gtk/gtkwindow.h:36, - from /usr/include/gtk-2.0/gtk/gtkdialog.h:35, - from /usr/include/gtk-2.0/gtk/gtkaboutdialog.h:32, - from /usr/include/gtk-2.0/gtk/gtk.h:33, - from src/ltrsift.h:22, - from src/error.h:22, - from src/ltrsift.c:19: -/usr/include/gtk-2.0/gtk/gtktypeutils.h:236:1: warning: 'GTypeDebugFlags' is deprecated [-Wdeprecated-declarations] - 236 | void gtk_type_init (GTypeDebugFlags debug_flags); - | ^~~~ -In file included from /usr/include/glib-2.0/gobject/gobject.h:24, - from /usr/include/glib-2.0/gobject/gbinding.h:29, + from src/menubar.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +src/menubar.c: In function 'save_as_activate': +src/menubar.c:962:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 962 | if (!g_thread_create(save_as_start, (gpointer) threaddata, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, + from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, from /usr/include/glib-2.0/gio/giotypes.h:28, @@ -2026,13 +2078,13 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/ltrsift.c:19: -/usr/include/glib-2.0/gobject/gtype.h:679:1: note: declared here - 679 | { - | ^ -src/project_wizard.c: In function 'project_wizard_apply': -src/project_wizard.c:292:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] - 292 | if (!g_thread_create(project_wizard_start_job, (gpointer) threaddata, FALSE, + from src/menubar.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +src/menubar.c: In function 'menubar_save_activate': +src/menubar.c:996:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 996 | if (!g_thread_create(save_project_data_start, (gpointer) threaddata, | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, @@ -2045,22 +2097,15 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/project_wizard.c:19: + from src/menubar.c:20: /usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here 100 | GThread *g_thread_create (GThreadFunc func, | ^~~~~~~~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/ltrsift.h:22, - from src/error.h:22, - from src/support.c:20: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, +src/menubar.c: In function 'open_activate': +src/menubar.c:1100:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 1100 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -2071,22 +2116,15 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/support.c:20: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -In file included from /usr/include/gtk-2.0/gtk/gtktoolitem.h:31, - from /usr/include/gtk-2.0/gtk/gtktoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtkmenutoolbutton.h:30, - from /usr/include/gtk-2.0/gtk/gtk.h:126, - from src/ltrsift.h:22, - from src/error.h:22, - from src/ltrsift.c:19: -/usr/include/gtk-2.0/gtk/gtktooltips.h:73:3: warning: 'GTimeVal' is deprecated: Use 'GDateTime' instead [-Wdeprecated-declarations] - 73 | GTimeVal last_popdown; - | ^~~~~~~~ -In file included from /usr/include/glib-2.0/glib/galloca.h:32, - from /usr/include/glib-2.0/glib.h:30, + from src/menubar.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +src/menubar.c: In function 'open_recent_activated': +src/menubar.c:1283:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 1283 | if (!g_thread_create(open_project_data_start, (gpointer) threaddata, + | ^~ +In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, from /usr/include/glib-2.0/gio/gioenums.h:28, @@ -2097,17 +2135,14 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/ltrsift.c:19: -/usr/include/glib-2.0/glib/gtypes.h:547:8: note: declared here - 547 | struct _GTimeVal - | ^~~~~~~~~ -src/ltrsift.c: In function 'main': -src/ltrsift.c:309:13: warning: Deprecated pre-processor symbol - 309 | if (!g_thread_supported()) - | ^~~~~~~~~~~~~~~~ -src/ltrsift.c:310:5: warning: 'g_thread_init' is deprecated [-Wdeprecated-declarations] - 310 | g_thread_init(NULL); - | ^~~~~~~~~~~~~ + from src/menubar.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ +src/gtk_ltr_families.c: In function 'notebook_toolbar_search_cand_group_clicked': +src/gtk_ltr_families.c:2873:3: warning: 'g_thread_create' is deprecated: Use 'g_thread_new' instead [-Wdeprecated-declarations] + 2873 | if (!g_thread_create(classify_nodes_start, (gpointer) threaddata, FALSE, + | ^~ In file included from /usr/include/glib-2.0/glib.h:111, from /usr/include/glib-2.0/gobject/gbinding.h:28, from /usr/include/glib-2.0/glib-object.h:22, @@ -2119,10 +2154,10 @@ from /usr/include/gtk-2.0/gtk/gtk.h:32, from src/ltrsift.h:22, from src/error.h:22, - from src/ltrsift.c:19: -/usr/include/glib-2.0/glib/deprecated/gthread.h:261:10: note: declared here - 261 | void g_thread_init (gpointer vtable); - | ^~~~~~~~~~~~~ + from src/gtk_ltr_families.c:20: +/usr/include/glib-2.0/glib/deprecated/gthread.h:100:10: note: declared here + 100 | GThread *g_thread_create (GThreadFunc func, + | ^~~~~~~~~~~~~~~ src/gtk_ltr_assistant.c: In function 'gtk_ltr_assistant_get_match_params': src/gtk_ltr_assistant.c:853:27: warning: ' -x ' directive writing 4 bytes into a region of size between 1 and 8192 [-Wformat-overflow=] 853 | sprintf(last_call, "%s -x %d", last_call, xgapped); @@ -2371,7 +2406,7 @@ gunzip sample_data/dmel-2L-chromosome-r5.8.fasta.gz gzip -n -9 sample_data/dmel-2L-chromosome-r5.8.fasta dh_auto_install -- 64bit=yes errorcheck=no prefix=/build/ltrsift-1.0.2/debian/tmp/usr - make -j15 install DESTDIR=/build/ltrsift-1.0.2/debian/ltrsift AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" 64bit=yes errorcheck=no prefix=/build/ltrsift-1.0.2/debian/tmp/usr + make -j16 install DESTDIR=/build/ltrsift-1.0.2/debian/ltrsift AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" 64bit=yes errorcheck=no prefix=/build/ltrsift-1.0.2/debian/tmp/usr make[2]: Entering directory '/build/ltrsift-1.0.2' test -d /build/ltrsift-1.0.2/debian/tmp/usr/bin || mkdir -p /build/ltrsift-1.0.2/debian/tmp/usr/bin cp bin/* /build/ltrsift-1.0.2/debian/tmp/usr/bin @@ -2450,12 +2485,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1518073/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/906316 and its subdirectories -I: Current time: Fri Aug 4 05:15:56 -12 2023 -I: pbuilder-time-stamp: 1691169356 +I: removing directory /srv/workspace/pbuilder/1518073 and its subdirectories +I: Current time: Fri Sep 6 13:40:17 +14 2024 +I: pbuilder-time-stamp: 1725579617