Diff of the two buildlogs: -- --- b1/build.log 2024-08-01 12:57:09.175808901 +0000 +++ b2/build.log 2024-08-01 13:00:07.680257811 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed Sep 3 07:17:23 -12 2025 -I: pbuilder-time-stamp: 1756927043 +I: Current time: Fri Aug 2 02:57:12 +14 2024 +I: pbuilder-time-stamp: 1722517032 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +17,8 @@ I: copying [./proftmb_1.1.12-9.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.CVYixiJU/trustedkeys.kbx': General error -gpgv: Signature made Wed Nov 25 19:13:30 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.tbLWn1sr/trustedkeys.kbx': General error +gpgv: Signature made Thu Nov 26 21:13:30 2020 +14 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key @@ -31,135 +31,166 @@ dpkg-source: info: applying gcc-6.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2882958/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/D01_modify_environment starting +debug: Running on ionos11-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 2 02:57 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=42 ' - DISTRIBUTION='bullseye' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=20 ' + DIRSTACK=() + DISTRIBUTION=bullseye + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='e7256959825c4400936e87f250b8f93f' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2882958' - PS1='# ' - PS2='> ' + INVOCATION_ID=d7a601c776f54e6aa590c9df9739c58b + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=517301 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vF1AfLjc/pbuilderrc_4p7O --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vF1AfLjc/b1 --logfile b1/build.log proftmb_1.1.12-9.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vF1AfLjc/pbuilderrc_hSF2 --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vF1AfLjc/b2 --logfile b2/build.log proftmb_1.1.12-9.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos5-amd64 6.9.7+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1~bpo12+1 (2024-07-03) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Mar 27 2024 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep - -rwxr-xr-x 1 root root 69032 Mar 27 2024 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep - -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip - -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe - -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Mar 27 2024 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Mar 27 2024 more - -rwsr-xr-x 1 root root 55528 Mar 27 2024 mount - -rwxr-xr-x 1 root root 18664 Mar 27 2024 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Aug 9 03:46 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Mar 27 2024 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Jan 19 2024 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Mar 27 2024 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Mar 27 2024 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat - -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp - -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff - -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep - -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep - -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce - -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep - -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless - -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore - -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew -I: user script /srv/workspace/pbuilder/2882958/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Mar 28 2022 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Mar 29 00:09 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep + -rwxr-xr-x 1 root root 69032 Mar 29 00:09 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Jan 25 2023 grep + -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip + -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe + -rwxr-xr-x 1 root root 98048 Apr 10 2022 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Mar 29 00:09 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Mar 29 00:09 more + -rwsr-xr-x 1 root root 55528 Mar 29 00:09 mount + -rwxr-xr-x 1 root root 18664 Mar 29 00:09 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Dec 17 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Mar 28 2022 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 9 Aug 2 02:57 sh -> /bin/bash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Mar 29 00:09 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Jan 20 2024 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Mar 29 00:09 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Mar 29 00:09 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat + -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp + -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff + -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep + -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep + -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce + -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep + -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless + -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore + -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -238,7 +269,7 @@ Get: 35 http://deb.debian.org/debian bullseye/main amd64 libgsl25 amd64 2.6+dfsg-2 [934 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 libgsl-dev amd64 2.6+dfsg-2 [1123 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 opt amd64 3.19-1.3+b1 [43.9 kB] -Fetched 20.7 MB in 0s (51.0 MB/s) +Fetched 20.7 MB in 2s (10.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19711 files and directories currently installed.) @@ -402,7 +433,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/proftmb-1.1.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../proftmb_1.1.12-9_source.changes +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for bullseye +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/proftmb-1.1.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../proftmb_1.1.12-9_source.changes dpkg-buildpackage: info: source package proftmb dpkg-buildpackage: info: source version 1.1.12-9 dpkg-buildpackage: info: source distribution unstable @@ -481,7 +516,7 @@ config.status: creating config.h config.status: executing depfiles commands dh_auto_build - make -j42 + make -j20 make[1]: Entering directory '/build/reproducible-path/proftmb-1.1.12' make all-recursive make[2]: Entering directory '/build/reproducible-path/proftmb-1.1.12' @@ -512,29 +547,7 @@ g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Seq.o Seq.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Sov.o Sov.cpp g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o structs.o structs.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tally.o Tally.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tools.o Tools.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o TrainSeq.o TrainSeq.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Viterbi.o Viterbi.cpp -g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Zscore.o Zscore.cpp -sed -e 's|__pkgdatadir__|/usr/share/proftmb|g;s|__datadir__|/usr/share|g;s|__PACKAGE__|proftmb|g;' < proftmb_example.txt.raw > proftmb_example.txt -In file included from Krogh1Best.cpp:1: -Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 34 | static void LoadL2L(char*) throw (string&); - | ^~~~~ -Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 35 | static void LoadL2A(char*) throw (string&); - | ^~~~~ -Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | static void LoadA2E(char*) throw (string&); - | ^~~~~ -Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 37 | static void LoadConnect(char*) throw (string&); - | ^~~~~ -Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 40 | vector&) throw (string&); - | ^~~~~ -In file included from BaumWelch.cpp:1: +In file included from Backward.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -556,13 +569,14 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); - | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ -In file included from Par.cpp:1: +In file included from Forward.cpp:1: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from Forward.cpp:2: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -578,30 +592,27 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -In file included from structs.cpp:2: -Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 34 | static void LoadL2L(char*) throw (string&); - | ^~~~~ -Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 35 | static void LoadL2A(char*) throw (string&); - | ^~~~~ -Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | static void LoadA2E(char*) throw (string&); - | ^~~~~ -Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 37 | static void LoadConnect(char*) throw (string&); +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ -Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 40 | vector&) throw (string&); - | ^~~~~ -In file included from TrainSeq.h:5, - from ExpectA.cpp:1: +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ +In file included from HTools.h:4, + from Backward.cpp:2: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ -In file included from TrainSeq.h:5, - from Load.h:4, - from Load.cpp:1: +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from HMMOutput.h:4, + from HMMOutput.cpp:1: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +In file included from HTools.h:4, + from HTools.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ @@ -611,8 +622,16 @@ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from TrainSeq.h:6, - from ExpectA.cpp:1: +In file included from HTools.h:5, + from HTools.cpp:1: +Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 34 | static void LoadL2L(char*) throw (string&); + | ^~~~~ +Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 35 | static void LoadL2A(char*) throw (string&); + | ^~~~~ +In file included from HMMOutput.h:5, + from HMMOutput.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -628,15 +647,6 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -In file included from TrainSeq.h:6, - from Load.h:4, - from Load.cpp:1: -Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 34 | static void LoadL2L(char*) throw (string&); - | ^~~~~ -Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 35 | static void LoadL2A(char*) throw (string&); - | ^~~~~ Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 36 | static void LoadA2E(char*) throw (string&); | ^~~~~ @@ -652,13 +662,24 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ +In file included from HMMOutput.cpp:1: +HMMOutput.h:21:46: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 21 | void DisplayArch(ostream&,Par&,uint,char* =""); + | ^ +HMMOutput.h:24:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 24 | void PrintEmit(ostream&,Par&,uint,char* =""); + | ^ +In file included from HMMOutput.cpp:2: +Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); + | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from Regularization.cpp:7: +In file included from GradientDescent.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -674,34 +695,47 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ +In file included from TrainSeq.h:5, + from ExpectA.cpp:1: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ +In file included from TrainSeq.h:6, + from ExpectA.cpp:1: +Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 34 | static void LoadL2L(char*) throw (string&); + | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); +Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 35 | static void LoadL2A(char*) throw (string&); + | ^~~~~ +Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | static void LoadA2E(char*) throw (string&); + | ^~~~~ +Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 37 | static void LoadConnect(char*) throw (string&); | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ -In file included from Posterior.cpp:1: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ +Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 40 | vector&) throw (string&); + | ^~~~~ In file included from TrainSeq.h:5, - from TrainSeq.cpp:1: + from Eval.h:11, + from Eval.cpp:6: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from Posterior.cpp:2: +In file included from BaumWelch.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -718,7 +752,8 @@ 40 | vector&) throw (string&); | ^~~~~ In file included from TrainSeq.h:6, - from TrainSeq.cpp:1: + from Eval.h:11, + from Eval.cpp:6: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -740,65 +775,39 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from Zscore.cpp:24: -Zscore.h:9:49: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 9 | Z_Calibrate(set >&,int,double) throw (string&); - | ^~~~~ -In file included from Krogh1Best.cpp:2: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -In file included from TrainSeq.h:5, - from BaumWelch.cpp:2: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ +In file included from Eval.cpp:6: +Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); + | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from proftmb.cpp:14: -Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 34 | static void LoadL2L(char*) throw (string&); - | ^~~~~ -Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 35 | static void LoadL2A(char*) throw (string&); - | ^~~~~ -Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | static void LoadA2E(char*) throw (string&); - | ^~~~~ -Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 37 | static void LoadConnect(char*) throw (string&); - | ^~~~~ -Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 40 | vector&) throw (string&); - | ^~~~~ In file included from TrainSeq.h:5, - from HMMEval.h:5, - from HMMEval.cpp:1: + from BaumWelch.cpp:2: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from TrainSeq.h:6, - from HMMEval.h:5, - from HMMEval.cpp:1: +In file included from TrainSeq.h:5, + from GradientDescent.cpp:2: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from Regularization.cpp:7: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -820,25 +829,10 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from HTools.h:4, - from HTools.cpp:1: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -In file included from TrainSeq.h:5, - from Load.h:4, - from Par.cpp:4: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -In file included from HTools.h:5, - from HTools.cpp:1: +Eval.cpp:654:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 654 | float RelativeEntropy(vector& A, vector& B) throw (char *){ + | ^~~~~ +In file included from Params.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -854,30 +848,7 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); - | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ -In file included from TrainSeq.h:5, - from Eval.h:11, - from Eval.cpp:6: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); - | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ -In file included from TrainSeq.h:6, - from Eval.h:11, - from Eval.cpp:6: +In file included from Par.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -899,46 +870,49 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); + | ^~~~~ +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ In file included from TrainSeq.h:5, - from proftmb.cpp:15: + from HMMEval.h:5, + from HMMEval.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from Eval.cpp:6: -Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); - | ^~~~~ -In file included from proftmb.cpp:18: -HMMOutput.h:21:46: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 21 | void DisplayArch(ostream&,Par&,uint,char* =""); - | ^ -HMMOutput.h:24:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 24 | void PrintEmit(ostream&,Par&,uint,char* =""); - | ^ -In file included from proftmb.cpp:20: -Zscore.h:9:49: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 9 | Z_Calibrate(set >&,int,double) throw (string&); - | ^~~~~ -In file included from proftmb.cpp:22: -Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); - | ^~~~~ -proftmb.cpp:68:53: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 68 | const char *, double, Par&, const char*, bool) throw (string &); - | ^~~~~ -In file included from HMMOutput.h:4, - from HMMOutput.cpp:1: +In file included from TrainSeq.h:5, + from ExpectC.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ +In file included from TrainSeq.h:6, + from HMMEval.h:5, + from HMMEval.cpp:1: +Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 34 | static void LoadL2L(char*) throw (string&); + | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from HMMOutput.h:5, - from HMMOutput.cpp:1: +Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 35 | static void LoadL2A(char*) throw (string&); + | ^~~~~ +Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | static void LoadA2E(char*) throw (string&); + | ^~~~~ +Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 37 | static void LoadConnect(char*) throw (string&); + | ^~~~~ +Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 40 | vector&) throw (string&); + | ^~~~~ +In file included from TrainSeq.h:6, + from ExpectC.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -954,27 +928,19 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -proftmb.cpp:273:78: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 273 | const char *datfile, double cut, Par& m, const char *name, bool multiQ) throw (string &) { - | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from HMMOutput.cpp:1: -HMMOutput.h:21:46: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 21 | void DisplayArch(ostream&,Par&,uint,char* =""); - | ^ -HMMOutput.h:24:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 24 | void PrintEmit(ostream&,Par&,uint,char* =""); - | ^ -In file included from HMMOutput.cpp:2: -Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); - | ^~~~~ -In file included from GradientDescent.cpp:1: +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); + | ^~~~~ +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ +In file included from Krogh1Best.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -990,7 +956,30 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -In file included from Backward.cpp:1: +In file included from TrainSeq.h:5, + from Load.h:4, + from Par.cpp:4: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from Seq.cpp:2: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from Posterior.cpp:1: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from Posterior.cpp:2: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -1006,7 +995,7 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -In file included from Params.cpp:1: +In file included from Seq.cpp:4: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -1034,25 +1023,14 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -Zscore.cpp:36:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 36 | int windowsize,double zmax) throw (string&){ - | ^~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tally.o Tally.cpp Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from TrainSeq.h:5, - from Tally.cpp:1: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -In file included from TrainSeq.h:6, - from Tally.cpp:1: +In file included from proftmb.cpp:14: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -1068,25 +1046,29 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -In file included from Viterbi.cpp:1: +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); + | ^~~~~ +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Tools.o Tools.cpp +In file included from TrainSeq.h:5, + from Load.h:4, + from Load.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -Eval.cpp:654:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 654 | float RelativeEntropy(vector& A, vector& B) throw (char *){ - | ^~~~~ -In file included from TrainSeq.h:5, - from ExpectC.cpp:1: +In file included from Krogh1Best.cpp:2: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -In file included from Viterbi.cpp:2: +In file included from TrainSeq.h:6, + from Load.h:4, + from Load.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -1102,11 +1084,19 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -In file included from TrainSeq.h:6, - from ExpectC.cpp:1: +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from structs.cpp:2: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ +Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 120 | static void ReadZCurve(char *) throw (string &); + | ^~~~~ +Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 121 | static void ReadNullFreq(char *) throw (string &); + | ^~~~~ Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 35 | static void LoadL2A(char*) throw (string&); | ^~~~~ @@ -1119,6 +1109,8 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o TrainSeq.o TrainSeq.cpp +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Viterbi.o Viterbi.cpp Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ @@ -1126,33 +1118,80 @@ 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ In file included from TrainSeq.h:5, - from GradientDescent.cpp:2: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -In file included from HTools.h:4, - from Backward.cpp:2: + from proftmb.cpp:15: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from Forward.cpp:1: +In file included from proftmb.cpp:18: +HMMOutput.h:21:46: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 21 | void DisplayArch(ostream&,Par&,uint,char* =""); + | ^ +HMMOutput.h:24:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 24 | void PrintEmit(ostream&,Par&,uint,char* =""); + | ^ +In file included from proftmb.cpp:20: +Zscore.h:9:49: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 9 | Z_Calibrate(set >&,int,double) throw (string&); + | ^~~~~ +In file included from proftmb.cpp:22: +Eval.h:48:59: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 48 | float RelativeEntropy(vector& A, vector& B) throw (char *); + | ^~~~~ +proftmb.cpp:68:53: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 68 | const char *, double, Par&, const char*, bool) throw (string &); + | ^~~~~ +Par.cpp:263:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 263 | void Par::LoadConnect(char* cf) throw (string&){ + | ^~~~~ +Seq.cpp:99:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 99 | bool Seq::InitLabels(SS& sdat) throw (string&){ + | ^~~~~ +g++ -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/proftmb-1.1.12=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Zscore.o Zscore.cpp +sed -e 's|__pkgdatadir__|/usr/share/proftmb|g;s|__datadir__|/usr/share|g;s|__PACKAGE__|proftmb|g;' < proftmb_example.txt.raw > proftmb_example.txt +proftmb.cpp:273:78: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 273 | const char *datfile, double cut, Par& m, const char *name, bool multiQ) throw (string &) { + | ^~~~~ +Par.cpp:348:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 348 | void Par::LoadL2L(char* l2lfile) throw (string&){ + | ^~~~~ +Par.cpp:415:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 415 | void Par::LoadL2A(char* l2afile) throw (string&){ + | ^~~~~ +Seq.cpp:313:39: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 313 | map Seq::Read(char* file) throw (string&){ + | ^~~~~ +Par.cpp:554:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 554 | void Par::LoadA2E(char* a2efile) throw (string&){ + | ^~~~~ +Par.cpp:652:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 652 | vector& redux) throw (string&){ + | ^~~~~ +Par.cpp:742:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 742 | void Par::ReadZCurve(char *ifile) throw (string&){ + | ^~~~~ +Par.cpp:763:37: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 763 | void Par::ReadNullFreq(char *ifile) throw (string&){ + | ^~~~~ +In file included from Zscore.cpp:24: +Zscore.h:9:49: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 9 | Z_Calibrate(set >&,int,double) throw (string&); + | ^~~~~ +Zscore.cpp:36:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | int windowsize,double zmax) throw (string&){ + | ^~~~~ +In file included from TrainSeq.h:5, + from Tally.cpp:1: Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 85 | bool InitLabels(set >&) throw (string&); | ^~~~~ Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 194 | static map > > Read(char*) throw (string&); | ^~~~~ -In file included from Seq.cpp:2: -Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 85 | bool InitLabels(set >&) throw (string&); - | ^~~~~ -In file included from Forward.cpp:2: +In file included from TrainSeq.h:6, + from Tally.cpp:1: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -1168,25 +1207,20 @@ Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 40 | vector&) throw (string&); | ^~~~~ -Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 194 | static map > > Read(char*) throw (string&); - | ^~~~~ -Par.cpp:263:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 263 | void Par::LoadConnect(char* cf) throw (string&){ - | ^~~~~ -Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 120 | static void ReadZCurve(char *) throw (string &); - | ^~~~~ -Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 121 | static void ReadNullFreq(char *) throw (string &); - | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -In file included from Seq.cpp:4: +In file included from Viterbi.cpp:1: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from Viterbi.cpp:2: Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 34 | static void LoadL2L(char*) throw (string&); | ^~~~~ @@ -1208,36 +1242,37 @@ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -Par.cpp:348:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 348 | void Par::LoadL2L(char* l2lfile) throw (string&){ - | ^~~~~ -Par.cpp:415:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 415 | void Par::LoadL2A(char* l2afile) throw (string&){ - | ^~~~~ +In file included from TrainSeq.h:5, + from TrainSeq.cpp:1: +Seq.h:85:46: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 85 | bool InitLabels(set >&) throw (string&); + | ^~~~~ +Seq.h:194:60: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 194 | static map > > Read(char*) throw (string&); + | ^~~~~ +In file included from TrainSeq.h:6, + from TrainSeq.cpp:1: +Par.h:34:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 34 | static void LoadL2L(char*) throw (string&); + | ^~~~~ +Par.h:35:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 35 | static void LoadL2A(char*) throw (string&); + | ^~~~~ +Par.h:36:29: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 36 | static void LoadA2E(char*) throw (string&); + | ^~~~~ +Par.h:37:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 37 | static void LoadConnect(char*) throw (string&); + | ^~~~~ +Par.h:40:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] + 40 | vector&) throw (string&); + | ^~~~~ Par.h:120:33: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 120 | static void ReadZCurve(char *) throw (string &); | ^~~~~ Par.h:121:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 121 | static void ReadNullFreq(char *) throw (string &); | ^~~~~ -Par.cpp:554:34: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 554 | void Par::LoadA2E(char* a2efile) throw (string&){ - | ^~~~~ -Par.cpp:652:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 652 | vector& redux) throw (string&){ - | ^~~~~ -Par.cpp:742:35: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 742 | void Par::ReadZCurve(char *ifile) throw (string&){ - | ^~~~~ -Par.cpp:763:37: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 763 | void Par::ReadNullFreq(char *ifile) throw (string&){ - | ^~~~~ -Seq.cpp:99:32: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 99 | bool Seq::InitLabels(SS& sdat) throw (string&){ - | ^~~~~ -Seq.cpp:313:39: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] - 313 | map Seq::Read(char* file) throw (string&){ - | ^~~~~ rm -f libhmm.a ar cru libhmm.a Backward.o BaumWelch.o Eval.o ExpectA.o ExpectC.o Forward.o GradientDescent.o HMMEval.o HMMOutput.o HTools.o Krogh1Best.o Load.o Output.o Par.o Params.o Posterior.o Regularization.o Seq.o Sov.o structs.o Tally.o Tools.o TrainSeq.o Viterbi.o Zscore.o ar: `u' modifier ignored since `D' is the default (see `U') @@ -1250,7 +1285,7 @@ make[2]: Leaving directory '/build/reproducible-path/proftmb-1.1.12' make[1]: Leaving directory '/build/reproducible-path/proftmb-1.1.12' dh_auto_test - make -j42 check VERBOSE=1 + make -j20 check VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/proftmb-1.1.12' Making check in examples make[2]: Entering directory '/build/reproducible-path/proftmb-1.1.12/examples' @@ -1266,7 +1301,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install - make -j42 install DESTDIR=/build/reproducible-path/proftmb-1.1.12/debian/proftmb AM_UPDATE_INFO_DIR=no + make -j20 install DESTDIR=/build/reproducible-path/proftmb-1.1.12/debian/proftmb AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/proftmb-1.1.12' Making install in examples make[2]: Entering directory '/build/reproducible-path/proftmb-1.1.12/examples' @@ -1291,8 +1326,8 @@ mkdir -p "/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" /bin/mkdir -p '/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/doc/proftmb' cp "."/input/* "/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/proftmb/" - /usr/bin/install -c -m 644 README '/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/doc/proftmb' rm -rf `find "/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" -name .svn` + /usr/bin/install -c -m 644 README '/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/doc/proftmb' find "/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" -type d -exec chmod 0755 {} \; find "/build/reproducible-path/proftmb-1.1.12/debian/proftmb/usr/share/proftmb" -type f -exec chmod 0644 {} \; make install-data-hook @@ -1331,12 +1366,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/517301/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2882958 and its subdirectories -I: Current time: Wed Sep 3 07:20:07 -12 2025 -I: pbuilder-time-stamp: 1756927207 +I: removing directory /srv/workspace/pbuilder/517301 and its subdirectories +I: Current time: Fri Aug 2 03:00:06 +14 2024 +I: pbuilder-time-stamp: 1722517206