Diff of the two buildlogs:

--
--- b1/build.log	2024-07-15 17:25:48.462041330 +0000
+++ b2/build.log	2024-07-15 17:27:44.073131674 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Mon Jul 15 05:21:45 -12 2024
-I: pbuilder-time-stamp: 1721064105
+I: Current time: Mon Aug 18 13:48:50 +14 2025
+I: pbuilder-time-stamp: 1755474530
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz]
 I: copying local configuration
@@ -17,8 +17,8 @@
 I: copying [./python-cobra_0.21.0-1.debian.tar.xz]
 I: Extracting source
 gpgv: unknown type of key resource 'trustedkeys.kbx'
-gpgv: keyblock resource '/tmp/dpkg-verify-sig.WCUMiQ46/trustedkeys.kbx': General error
-gpgv: Signature made Mon Feb  8 20:07:59 2021 -12
+gpgv: keyblock resource '/tmp/dpkg-verify-sig.x6x_samY/trustedkeys.kbx': General error
+gpgv: Signature made Tue Feb  9 22:07:59 2021 +14
 gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
 gpgv:                issuer "tille@debian.org"
 gpgv: Can't check signature: No public key
@@ -32,135 +32,166 @@
 dpkg-source: info: applying xfail_test_show_versions.patch
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/1997148/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/D01_modify_environment starting
+debug: Running on ionos15-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Aug 18 13:49 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build/reproducible-path'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='amd64'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=20 '
-  DISTRIBUTION='bullseye'
-  HOME='/root'
-  HOST_ARCH='amd64'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+  BASH_VERSION='5.1.4(1)-release'
+  BUILDDIR=/build/reproducible-path
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=amd64
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=42 '
+  DIRSTACK=()
+  DISTRIBUTION=bullseye
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=x86_64
+  HOST_ARCH=amd64
   IFS=' 	
   '
-  INVOCATION_ID='82b7cd1eeb8d4182a999ade51937fd2d'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='1997148'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=2e5924f185724260b59640f7e4fb362d
+  LANG=C
+  LANGUAGE=et_EE:et
+  LC_ALL=C
+  MACHTYPE=x86_64-pc-linux-gnu
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnu
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=2343723
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cmHWMIgc/pbuilderrc_pEfo --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cmHWMIgc/b1 --logfile b1/build.log python-cobra_0.21.0-1.dsc'
-  SUDO_GID='111'
-  SUDO_UID='106'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://46.16.76.132:3128'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cmHWMIgc/pbuilderrc_eREy --distribution bullseye --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cmHWMIgc/b2 --logfile b2/build.log python-cobra_0.21.0-1.dsc'
+  SUDO_GID=111
+  SUDO_UID=106
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://213.165.73.152:3128
 I: uname -a
-  Linux ionos11-amd64 6.1.0-22-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.94-1 (2024-06-21) x86_64 GNU/Linux
+  Linux i-capture-the-hostname 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux
 I: ls -l /bin
   total 5476
-  -rwxr-xr-x 1 root root 1234376 Mar 27  2022 bash
-  -rwxr-xr-x 3 root root   38984 Jul 20  2020 bunzip2
-  -rwxr-xr-x 3 root root   38984 Jul 20  2020 bzcat
-  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzcmp -> bzdiff
-  -rwxr-xr-x 1 root root    2225 Jul 20  2020 bzdiff
-  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzegrep -> bzgrep
-  -rwxr-xr-x 1 root root    4877 Sep  4  2019 bzexe
-  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzfgrep -> bzgrep
-  -rwxr-xr-x 1 root root    3775 Jul 20  2020 bzgrep
-  -rwxr-xr-x 3 root root   38984 Jul 20  2020 bzip2
-  -rwxr-xr-x 1 root root   18424 Jul 20  2020 bzip2recover
-  lrwxrwxrwx 1 root root       6 Jul 20  2020 bzless -> bzmore
-  -rwxr-xr-x 1 root root    1297 Jul 20  2020 bzmore
-  -rwxr-xr-x 1 root root   43936 Sep 23  2020 cat
-  -rwxr-xr-x 1 root root   72672 Sep 23  2020 chgrp
-  -rwxr-xr-x 1 root root   64448 Sep 23  2020 chmod
-  -rwxr-xr-x 1 root root   72672 Sep 23  2020 chown
-  -rwxr-xr-x 1 root root  151168 Sep 23  2020 cp
-  -rwxr-xr-x 1 root root  125560 Dec 10  2020 dash
-  -rwxr-xr-x 1 root root  113664 Sep 23  2020 date
-  -rwxr-xr-x 1 root root   80968 Sep 23  2020 dd
-  -rwxr-xr-x 1 root root   93936 Sep 23  2020 df
-  -rwxr-xr-x 1 root root  147176 Sep 23  2020 dir
-  -rwxr-xr-x 1 root root   84440 Mar 27 22:09 dmesg
-  lrwxrwxrwx 1 root root       8 Nov  6  2019 dnsdomainname -> hostname
-  lrwxrwxrwx 1 root root       8 Nov  6  2019 domainname -> hostname
-  -rwxr-xr-x 1 root root   39712 Sep 23  2020 echo
-  -rwxr-xr-x 1 root root      28 Jan 24  2023 egrep
-  -rwxr-xr-x 1 root root   39680 Sep 23  2020 false
-  -rwxr-xr-x 1 root root      28 Jan 24  2023 fgrep
-  -rwxr-xr-x 1 root root   69032 Mar 27 22:09 findmnt
-  -rwsr-xr-x 1 root root   34896 Feb 26  2021 fusermount
-  -rwxr-xr-x 1 root root  203072 Jan 24  2023 grep
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 gunzip
-  -rwxr-xr-x 1 root root    6447 Apr  9  2022 gzexe
-  -rwxr-xr-x 1 root root   98048 Apr  9  2022 gzip
-  -rwxr-xr-x 1 root root   22600 Nov  6  2019 hostname
-  -rwxr-xr-x 1 root root   72840 Sep 23  2020 ln
-  -rwxr-xr-x 1 root root   56952 Feb  7  2020 login
-  -rwxr-xr-x 1 root root  147176 Sep 23  2020 ls
-  -rwxr-xr-x 1 root root  149736 Mar 27 22:09 lsblk
-  -rwxr-xr-x 1 root root   85184 Sep 23  2020 mkdir
-  -rwxr-xr-x 1 root root   76896 Sep 23  2020 mknod
-  -rwxr-xr-x 1 root root   48064 Sep 23  2020 mktemp
-  -rwxr-xr-x 1 root root   59632 Mar 27 22:09 more
-  -rwsr-xr-x 1 root root   55528 Mar 27 22:09 mount
-  -rwxr-xr-x 1 root root   18664 Mar 27 22:09 mountpoint
-  -rwxr-xr-x 1 root root  147080 Sep 23  2020 mv
-  lrwxrwxrwx 1 root root       8 Nov  6  2019 nisdomainname -> hostname
-  lrwxrwxrwx 1 root root      14 Dec 16  2021 pidof -> /sbin/killall5
-  -rwxr-xr-x 1 root root   43872 Sep 23  2020 pwd
-  lrwxrwxrwx 1 root root       4 Mar 27  2022 rbash -> bash
-  -rwxr-xr-x 1 root root   52032 Sep 23  2020 readlink
-  -rwxr-xr-x 1 root root   72704 Sep 23  2020 rm
-  -rwxr-xr-x 1 root root   52032 Sep 23  2020 rmdir
-  -rwxr-xr-x 1 root root   27472 Sep 27  2020 run-parts
-  -rwxr-xr-x 1 root root  122224 Dec 22  2018 sed
-  lrwxrwxrwx 1 root root       4 Jul  6 21:26 sh -> dash
-  -rwxr-xr-x 1 root root   43808 Sep 23  2020 sleep
-  -rwxr-xr-x 1 root root   84928 Sep 23  2020 stty
-  -rwsr-xr-x 1 root root   71912 Mar 27 22:09 su
-  -rwxr-xr-x 1 root root   39744 Sep 23  2020 sync
-  -rwxr-xr-x 1 root root  531928 Jan 19 21:59 tar
-  -rwxr-xr-x 1 root root   14456 Sep 27  2020 tempfile
-  -rwxr-xr-x 1 root root  101408 Sep 23  2020 touch
-  -rwxr-xr-x 1 root root   39680 Sep 23  2020 true
-  -rwxr-xr-x 1 root root   14328 Feb 26  2021 ulockmgr_server
-  -rwsr-xr-x 1 root root   35040 Mar 27 22:09 umount
-  -rwxr-xr-x 1 root root   39744 Sep 23  2020 uname
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 uncompress
-  -rwxr-xr-x 1 root root  147176 Sep 23  2020 vdir
-  -rwxr-xr-x 1 root root   63744 Mar 27 22:09 wdctl
-  lrwxrwxrwx 1 root root       8 Nov  6  2019 ypdomainname -> hostname
-  -rwxr-xr-x 1 root root    1984 Apr  9  2022 zcat
-  -rwxr-xr-x 1 root root    1678 Apr  9  2022 zcmp
-  -rwxr-xr-x 1 root root    5898 Apr  9  2022 zdiff
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zegrep
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zfgrep
-  -rwxr-xr-x 1 root root    2081 Apr  9  2022 zforce
-  -rwxr-xr-x 1 root root    8049 Apr  9  2022 zgrep
-  -rwxr-xr-x 1 root root    2206 Apr  9  2022 zless
-  -rwxr-xr-x 1 root root    1842 Apr  9  2022 zmore
-  -rwxr-xr-x 1 root root    4577 Apr  9  2022 znew
-I: user script /srv/workspace/pbuilder/1997148/tmp/hooks/D02_print_environment finished
+  -rwxr-xr-x 1 root root 1234376 Mar 28  2022 bash
+  -rwxr-xr-x 3 root root   38984 Jul 21  2020 bunzip2
+  -rwxr-xr-x 3 root root   38984 Jul 21  2020 bzcat
+  lrwxrwxrwx 1 root root       6 Jul 21  2020 bzcmp -> bzdiff
+  -rwxr-xr-x 1 root root    2225 Jul 21  2020 bzdiff
+  lrwxrwxrwx 1 root root       6 Jul 21  2020 bzegrep -> bzgrep
+  -rwxr-xr-x 1 root root    4877 Sep  5  2019 bzexe
+  lrwxrwxrwx 1 root root       6 Jul 21  2020 bzfgrep -> bzgrep
+  -rwxr-xr-x 1 root root    3775 Jul 21  2020 bzgrep
+  -rwxr-xr-x 3 root root   38984 Jul 21  2020 bzip2
+  -rwxr-xr-x 1 root root   18424 Jul 21  2020 bzip2recover
+  lrwxrwxrwx 1 root root       6 Jul 21  2020 bzless -> bzmore
+  -rwxr-xr-x 1 root root    1297 Jul 21  2020 bzmore
+  -rwxr-xr-x 1 root root   43936 Sep 24  2020 cat
+  -rwxr-xr-x 1 root root   72672 Sep 24  2020 chgrp
+  -rwxr-xr-x 1 root root   64448 Sep 24  2020 chmod
+  -rwxr-xr-x 1 root root   72672 Sep 24  2020 chown
+  -rwxr-xr-x 1 root root  151168 Sep 24  2020 cp
+  -rwxr-xr-x 1 root root  125560 Dec 11  2020 dash
+  -rwxr-xr-x 1 root root  113664 Sep 24  2020 date
+  -rwxr-xr-x 1 root root   80968 Sep 24  2020 dd
+  -rwxr-xr-x 1 root root   93936 Sep 24  2020 df
+  -rwxr-xr-x 1 root root  147176 Sep 24  2020 dir
+  -rwxr-xr-x 1 root root   84440 Mar 29  2024 dmesg
+  lrwxrwxrwx 1 root root       8 Nov  8  2019 dnsdomainname -> hostname
+  lrwxrwxrwx 1 root root       8 Nov  8  2019 domainname -> hostname
+  -rwxr-xr-x 1 root root   39712 Sep 24  2020 echo
+  -rwxr-xr-x 1 root root      28 Jan 25  2023 egrep
+  -rwxr-xr-x 1 root root   39680 Sep 24  2020 false
+  -rwxr-xr-x 1 root root      28 Jan 25  2023 fgrep
+  -rwxr-xr-x 1 root root   69032 Mar 29  2024 findmnt
+  -rwsr-xr-x 1 root root   34896 Feb 27  2021 fusermount
+  -rwxr-xr-x 1 root root  203072 Jan 25  2023 grep
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
+  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
+  -rwxr-xr-x 1 root root   98048 Apr 10  2022 gzip
+  -rwxr-xr-x 1 root root   22600 Nov  8  2019 hostname
+  -rwxr-xr-x 1 root root   72840 Sep 24  2020 ln
+  -rwxr-xr-x 1 root root   56952 Feb  8  2020 login
+  -rwxr-xr-x 1 root root  147176 Sep 24  2020 ls
+  -rwxr-xr-x 1 root root  149736 Mar 29  2024 lsblk
+  -rwxr-xr-x 1 root root   85184 Sep 24  2020 mkdir
+  -rwxr-xr-x 1 root root   76896 Sep 24  2020 mknod
+  -rwxr-xr-x 1 root root   48064 Sep 24  2020 mktemp
+  -rwxr-xr-x 1 root root   59632 Mar 29  2024 more
+  -rwsr-xr-x 1 root root   55528 Mar 29  2024 mount
+  -rwxr-xr-x 1 root root   18664 Mar 29  2024 mountpoint
+  -rwxr-xr-x 1 root root  147080 Sep 24  2020 mv
+  lrwxrwxrwx 1 root root       8 Nov  8  2019 nisdomainname -> hostname
+  lrwxrwxrwx 1 root root      14 Dec 17  2021 pidof -> /sbin/killall5
+  -rwxr-xr-x 1 root root   43872 Sep 24  2020 pwd
+  lrwxrwxrwx 1 root root       4 Mar 28  2022 rbash -> bash
+  -rwxr-xr-x 1 root root   52032 Sep 24  2020 readlink
+  -rwxr-xr-x 1 root root   72704 Sep 24  2020 rm
+  -rwxr-xr-x 1 root root   52032 Sep 24  2020 rmdir
+  -rwxr-xr-x 1 root root   27472 Sep 28  2020 run-parts
+  -rwxr-xr-x 1 root root  122224 Dec 23  2018 sed
+  lrwxrwxrwx 1 root root       9 Aug 18 13:49 sh -> /bin/bash
+  -rwxr-xr-x 1 root root   43808 Sep 24  2020 sleep
+  -rwxr-xr-x 1 root root   84928 Sep 24  2020 stty
+  -rwsr-xr-x 1 root root   71912 Mar 29  2024 su
+  -rwxr-xr-x 1 root root   39744 Sep 24  2020 sync
+  -rwxr-xr-x 1 root root  531928 Jan 20  2024 tar
+  -rwxr-xr-x 1 root root   14456 Sep 28  2020 tempfile
+  -rwxr-xr-x 1 root root  101408 Sep 24  2020 touch
+  -rwxr-xr-x 1 root root   39680 Sep 24  2020 true
+  -rwxr-xr-x 1 root root   14328 Feb 27  2021 ulockmgr_server
+  -rwsr-xr-x 1 root root   35040 Mar 29  2024 umount
+  -rwxr-xr-x 1 root root   39744 Sep 24  2020 uname
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
+  -rwxr-xr-x 1 root root  147176 Sep 24  2020 vdir
+  -rwxr-xr-x 1 root root   63744 Mar 29  2024 wdctl
+  lrwxrwxrwx 1 root root       8 Nov  8  2019 ypdomainname -> hostname
+  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
+  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
+  -rwxr-xr-x 1 root root    5898 Apr 10  2022 zdiff
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
+  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
+  -rwxr-xr-x 1 root root    8049 Apr 10  2022 zgrep
+  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
+  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
+  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -425,7 +456,7 @@
 Get: 171 http://deb.debian.org/debian bullseye/main amd64 python3-sbml5 amd64 5.19.0+dfsg-1 [3421 kB]
 Get: 172 http://deb.debian.org/debian bullseye/main amd64 python3-simplejson amd64 3.17.2-1 [61.7 kB]
 Get: 173 http://deb.debian.org/debian bullseye/main amd64 python3-tabulate all 0.8.7-0.1 [33.8 kB]
-Fetched 93.0 MB in 3s (31.8 MB/s)
+Fetched 93.0 MB in 8s (11.7 MB/s)
 debconf: delaying package configuration, since apt-utils is not installed
 Selecting previously unselected package bsdextrautils.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19711 files and directories currently installed.)
@@ -1160,7 +1191,11 @@
 Building tag database...
  -> Finished parsing the build-deps
 I: Building the package
-I: Running cd /build/reproducible-path/python-cobra-0.21.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../python-cobra_0.21.0-1_source.changes
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for bullseye
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/python-cobra-0.21.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../python-cobra_0.21.0-1_source.changes
 dpkg-buildpackage: info: source package python-cobra
 dpkg-buildpackage: info: source version 0.21.0-1
 dpkg-buildpackage: info: source distribution unstable
@@ -1196,118 +1231,118 @@
 creating /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra
 copying src/cobra/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra
 copying src/cobra/exceptions.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra
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+copying src/cobra/io/web/biomodels_repository.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web
+copying src/cobra/io/web/bigg_models_repository.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web
 copying src/cobra/io/web/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web
 copying src/cobra/io/web/abstract_model_repository.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web
-copying src/cobra/io/web/bigg_models_repository.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web
-copying src/cobra/io/web/biomodels_repository.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web
-copying src/cobra/io/web/load.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web
 copying src/cobra/io/schema_v1.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io
 creating /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/mini.mat -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/invalid0.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/iJO1366.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/raven.mat -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/validation.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/invalid1.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/example_notes.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/textbook_fva.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/mini_fbc2.xml.bz2 -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/fbc_ex2.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/valid_annotation_output.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/textbook_solution.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/JSON_with_inf_bounds.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/mini.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/mini_fbc1.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/invalid2.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/mini.mat -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/salmonella.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/mini.yml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/fbc_ex2.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/update_pickles.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/mini_fbc2.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/e_coli_core.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/invalid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/invalid0.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/invalid1.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/textbook_pfba_fva.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/salmonella.genes -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/annotation.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/textbook.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/mini.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/validation.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/salmonella.genes -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/salmonella.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/mini.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/raven.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/iJO1366.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/mini.yml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/JSON_with_inf_bounds.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/valid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/salmonella.media -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/invalid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/textbook_solution.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/e_coli_core.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/mini.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/fbc_ex1.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/example_notes.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/update_pickles.py -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/mini_cobra.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
+copying src/cobra/test/data/mini_fbc2.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
 copying src/cobra/test/data/mini_fbc2.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/iJO1366.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/fbc_ex1.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/valid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/mini_fbc2.xml.bz2 -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/mini_fbc1.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/annotation.xml -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/iJO1366.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/textbook_fva.json -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/raven.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
-copying src/cobra/test/data/salmonella.pickle -> /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data
    dh_auto_test -O--buildsystem=pybuild
 I: pybuild base:232: cd /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build; python3.9 -m pytest 
 ============================= test session starts ==============================
@@ -1362,7 +1397,7 @@
   /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/model.py:298: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
     logger.warn(
 
-.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py: 105 warnings
+.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py: 173 warnings
   /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/minimal_medium.py:104: DeprecationWarning: The default dtype for empty Series will be 'object' instead of 'float64' in a future version. Specify a dtype explicitly to silence this warning.
     medium = pd.Series()
 
@@ -1375,14 +1410,14 @@
 
Computing stats ...
Computing stats ... group 1/1
Computing stats ... group 1/1: min
Computing stats ... group 1/1: min (1/2)
Computing stats ... group 1/1: min (2/2)
Computing stats ... group 1/1: min (1/2)
Computing stats ... group 1/1: min (2/2)
Computing stats ... group 1/1: max
Computing stats ... group 1/1: max (1/2)
Computing stats ... group 1/1: max (2/2)
Computing stats ... group 1/1: max (1/2)
Computing stats ... group 1/1: max (2/2)
Computing stats ... group 1/1: mean
Computing stats ... group 1/1: mean (1/2)
Computing stats ... group 1/1: mean (2/2)
Computing stats ... group 1/1: mean (1/2)
Computing stats ... group 1/1: mean (2/2)
Computing stats ... group 1/1: median
Computing stats ... group 1/1: median (1/2)
Computing stats ... group 1/1: median (2/2)
Computing stats ... group 1/1: median (1/2)
Computing stats ... group 1/1: median (2/2)
Computing stats ... group 1/1: iqr
Computing stats ... group 1/1: iqr (1/2)
Computing stats ... group 1/1: iqr (2/2)
Computing stats ... group 1/1: iqr (1/2)
Computing stats ... group 1/1: iqr (2/2)
Computing stats ... group 1/1: stddev
Computing stats ... group 1/1: stddev (1/2)
Computing stats ... group 1/1: stddev (2/2)
Computing stats ... group 1/1: stddev (1/2)
Computing stats ... group 1/1: stddev (2/2)
Computing stats ... group 1/1: ops
Computing stats ... group 1/1: ops (1/2)
Computing stats ... group 1/1: ops (2/2)
Computing stats ... group 1/1: ops (1/2)
Computing stats ... group 1/1: ops (2/2)
Computing stats ... group 1/1: ops: outliers
Computing stats ... group 1/1: ops: outliers (1/2)
Computing stats ... group 1/1: ops: outliers (2/2)
Computing stats ... group 1/1: ops: rounds
Computing stats ... group 1/1: ops: rounds (1/2)
Computing stats ... group 1/1: ops: rounds (2/2)
Computing stats ... group 1/1: ops: iterations
Computing stats ... group 1/1: ops: iterations (1/2)
Computing stats ... group 1/1: ops: iterations (2/2)
-------------------------------------------------------------------------------------- benchmark: 2 tests --------------------------------------------------------------------------------------
 Name (time in ms)                    Min                Max               Mean            StdDev             Median               IQR            Outliers      OPS            Rounds  Iterations
 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
-test_benchmark_medium_mip        17.8353 (1.0)      29.0506 (1.08)     21.7429 (1.0)      3.4769 (2.02)     20.3484 (1.0)      7.0625 (3.25)         18;0  45.9921 (1.0)          46           1
-test_benchmark_medium_linear     18.9983 (1.07)     26.8103 (1.0)      22.1621 (1.02)     1.7195 (1.0)      22.7410 (1.12)     2.1751 (1.0)          15;1  45.1221 (0.98)         44           1
+test_benchmark_medium_mip        11.3570 (1.0)      12.3906 (1.01)     11.4721 (1.0)      0.1253 (1.0)      11.4522 (1.0)      0.0931 (1.0)           5;4  87.1679 (1.0)          86           1
+test_benchmark_medium_linear     11.6706 (1.03)     12.2228 (1.0)      11.8315 (1.03)     0.1299 (1.04)     11.7751 (1.03)     0.1801 (1.93)         18;1  84.5204 (0.97)         72           1
 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
 Legend:
   Outliers: 1 Standard Deviation from Mean; 1.5 IQR (InterQuartile Range) from 1st Quartile and 3rd Quartile.
   OPS: Operations Per Second, computed as 1 / Mean
-====================== 28 passed, 123 warnings in 11.68s =======================
+======================= 28 passed, 191 warnings in 6.78s =======================
    create-stamp debian/debhelper-build-stamp
    dh_testroot -O--buildsystem=pybuild
    dh_prep -O--buildsystem=pybuild
@@ -1397,268 +1432,268 @@
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/.benchmarks
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/room.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/deletion.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/geometric.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/gapfilling.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/parsimonious.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/moma.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/loopless.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/fastcc.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/phenotype_phase_plane.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/parsimonious.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/deletion.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/variability.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/geometric.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/helpers.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/variability.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/reaction.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/sampling.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/achr.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/sampling.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/optgp.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/hr_sampler.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/achr.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/optgp.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
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-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/gene.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/singleton.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/model.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/dictlist.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/solution.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/formula.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/configuration.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/metabolite.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
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-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/formula.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/group.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/model.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/object.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/gene.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
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-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/object.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/group.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/species.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/reaction.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
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-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/json.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/yaml.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/mat.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
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-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/abstract_model_repository.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/bigg_models_repository.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/biomodels_repository.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/load.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
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-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/abstract_model_repository.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/load.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
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-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/sbml.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/yaml.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/dict.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/json.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/mat.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/schema_v1.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/sbml.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/dict.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/array.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/util.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/solver.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/context.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/array.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/context.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/solver.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/util.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/exceptions.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/conftest.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_manipulation.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/test_manipulation.cpython-39-pytest-6.0.2.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/test_medium.cpython-39-pytest-6.0.2.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__pycache__/conftest.cpython-39-pytest-6.0.2.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__pycache__
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.mat -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid0.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/raven.mat -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/validation.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid1.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/example_notes.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_fva.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.bz2 -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex2.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/valid_annotation_output.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_solution.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/JSON_with_inf_bounds.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc1.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid2.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.mat -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.yml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex2.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/update_pickles.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/e_coli_core.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid0.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid1.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_pfba_fva.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.genes -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/annotation.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/validation.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.genes -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/raven.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.yml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/JSON_with_inf_bounds.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/valid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.media -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/invalid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_solution.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/e_coli_core.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex1.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/example_notes.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/update_pickles.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_cobra.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.xml.gz -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/fbc_ex1.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/valid_annotation_format.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc2.xml.bz2 -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/mini_fbc1.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/annotation.xml -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/iJO1366.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/textbook_fva.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/raven.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/data/salmonella.pickle -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_medium.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/exceptions.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__pycache__
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/array.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/solver.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/array.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/util.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/solver.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/__pycache__/context.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/util.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/util/context.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/validate.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/modify.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/delete.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/modify.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/validate.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/delete.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/annotate.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/test_manipulation.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/test/conftest.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/schema_v1.json -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/yaml.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/mat.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/sbml.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/dict.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__pycache__/json.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/dict.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/sbml.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/load.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/bigg_models_repository.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/biomodels_repository.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/abstract_model_repository.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__pycache__/load.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/biomodels_repository.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/bigg_models_repository.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/web/abstract_model_repository.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/json.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/yaml.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/io/mat.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/group.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/dictlist.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/formula.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/species.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/dictlist.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/model.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/reaction.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/metabolite.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/group.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/singleton.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/gene.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/configuration.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/object.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__pycache__/solution.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/configuration.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/species.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/metabolite.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/formula.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/model.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/solution.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/gene.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/singleton.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/reaction.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/core/object.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/sampling.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/achr.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/hr_sampler.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/optgp.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__pycache__/sampling.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/achr.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/optgp.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/hr_sampler.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/sampling/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/annotations.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/minimal_medium.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/annotations.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/boundary_types.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/minimal_medium.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/metabolite_summary.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/summary.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/reaction_summary.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
 creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/summary.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/reaction_summary.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/metabolite_summary.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/reaction_summary.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/model_summary.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__pycache__/summary.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/summary.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/model_summary.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/annotations.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/minimal_medium.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/minimal_medium.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/annotations.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/__pycache__/boundary_types.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__pycache__
-copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/medium/boundary_types.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/summary/reaction_summary.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/delete.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/modify.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/annotate.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__pycache__/validate.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/delete.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/annotate.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/validate.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/manipulation/modify.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra
 copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/exceptions.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra
-creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/.benchmarks
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/room.py to room.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/deletion.py to deletion.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/geometric.py to geometric.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/loopless.py to loopless.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/fastcc.py to fastcc.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/helpers.py to helpers.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/variability.py to variability.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/reaction.py to reaction.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/sampling.py to sampling.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/achr.py to achr.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/optgp.py to optgp.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/gene.py to gene.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/singleton.py to singleton.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/model.py to model.cpython-39.pyc
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+creating /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/loopless.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/parsimonious.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/variability.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/moma.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/helpers.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/deletion.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/geometric.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/room.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/phenotype_phase_plane.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/fastcc.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__pycache__/gapfilling.cpython-39.pyc -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__pycache__
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/room.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/fastcc.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/loopless.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/parsimonious.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/deletion.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/geometric.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/phenotype_phase_plane.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/__init__.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/gapfilling.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/helpers.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/reaction.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/variability.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+copying /build/reproducible-path/python-cobra-0.21.0/.pybuild/cpython3_3.9_cobra/build/cobra/flux_analysis/moma.py -> /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/array.py to array.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/context.py to context.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/solver.py to solver.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/util.py to util.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_medium.py to test_medium.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data/update_pickles.py to update_pickles.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_manipulation.py to test_manipulation.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/conftest.py to conftest.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/dict.py to dict.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/sbml.py to sbml.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/load.py to load.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/bigg_models_repository.py to bigg_models_repository.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/abstract_model_repository.py to abstract_model_repository.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/json.py to json.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/yaml.py to yaml.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/mat.py to mat.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/group.py to group.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/dictlist.py to dictlist.cpython-39.pyc
 /usr/lib/python3.9/dist-packages/cobra/core/dictlist.py:215: SyntaxWarning: "is" with a literal. Did you mean "=="?
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/solution.py to solution.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/formula.py to formula.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/configuration.py to configuration.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/metabolite.py to metabolite.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/object.py to object.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/group.py to group.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/species.py to species.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/metabolite.py to metabolite.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/formula.py to formula.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/model.py to model.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/solution.py to solution.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/gene.py to gene.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/singleton.py to singleton.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/reaction.py to reaction.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/json.py to json.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/yaml.py to yaml.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/mat.py to mat.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/abstract_model_repository.py to abstract_model_repository.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/bigg_models_repository.py to bigg_models_repository.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/biomodels_repository.py to biomodels_repository.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/web/load.py to load.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/sbml.py to sbml.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/io/dict.py to dict.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/conftest.py to conftest.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_manipulation.py to test_manipulation.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/data/update_pickles.py to update_pickles.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/test/test_medium.py to test_medium.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/array.py to array.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/solver.py to solver.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/util.py to util.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/util/context.py to context.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/validate.py to validate.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/modify.py to modify.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/delete.py to delete.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/annotate.py to annotate.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/core/object.py to object.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/sampling.py to sampling.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/achr.py to achr.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/optgp.py to optgp.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/hr_sampler.py to hr_sampler.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/sampling/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/annotations.py to annotations.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/boundary_types.py to boundary_types.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/metabolite_summary.py to metabolite_summary.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/summary.py to summary.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/reaction_summary.py to reaction_summary.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/model_summary.py to model_summary.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/__init__.py to __init__.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/annotations.py to annotations.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/minimal_medium.py to minimal_medium.cpython-39.pyc
-byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/medium/boundary_types.py to boundary_types.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/summary/reaction_summary.py to reaction_summary.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/delete.py to delete.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/annotate.py to annotate.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/validate.py to validate.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/manipulation/modify.py to modify.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/__init__.py to __init__.cpython-39.pyc
 byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/exceptions.py to exceptions.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/room.py to room.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/fastcc.py to fastcc.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/loopless.py to loopless.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/parsimonious.py to parsimonious.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/deletion.py to deletion.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/geometric.py to geometric.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/phenotype_phase_plane.py to phenotype_phase_plane.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/__init__.py to __init__.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/gapfilling.py to gapfilling.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/helpers.py to helpers.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/reaction.py to reaction.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/variability.py to variability.cpython-39.pyc
+byte-compiling /build/reproducible-path/python-cobra-0.21.0/debian/python3-cobra/usr/lib/python3.9/dist-packages/cobra/flux_analysis/moma.py to moma.cpython-39.pyc
 running install_egg_info
 running egg_info
 creating src/cobra.egg-info
@@ -1709,12 +1744,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: including full source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/2343723/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/1997148 and its subdirectories
-I: Current time: Mon Jul 15 05:25:47 -12 2024
-I: pbuilder-time-stamp: 1721064347
+I: removing directory /srv/workspace/pbuilder/2343723 and its subdirectories
+I: Current time: Mon Aug 18 13:50:43 +14 2025
+I: pbuilder-time-stamp: 1755474643