Diff of the two buildlogs: -- --- b1/build.log 2022-02-10 01:24:19.051116526 +0000 +++ b2/build.log 2022-02-10 01:25:51.252270872 +0000 @@ -1,7 +1,6 @@ -W: cgroups are not available on the host, not using them. I: pbuilder: network access will be disabled during build -I: Current time: Wed Feb 9 13:21:53 -12 2022 -I: pbuilder-time-stamp: 1644456113 +I: Current time: Wed Mar 15 21:47:20 +14 2023 +I: pbuilder-time-stamp: 1678866440 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration @@ -17,8 +16,8 @@ I: copying [./python-deeptools_3.5.0-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' -gpgv: keyblock resource '/tmp/dpkg-verify-sig.uHdPjS9j/trustedkeys.kbx': General error -gpgv: Signature made Thu Sep 17 01:51:50 2020 -12 +gpgv: keyblock resource '/tmp/dpkg-verify-sig.7Q5qO3Xe/trustedkeys.kbx': General error +gpgv: Signature made Fri Sep 18 03:51:50 2020 +14 gpgv: using RSA key 84C1977A89E7EFED3E5CA62E2FD8BEDAC020EED1 gpgv: issuer "moeller@debian.org" gpgv: Can't check signature: No public key @@ -31,134 +30,169 @@ dpkg-source: info: applying python2to3_for_executables.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2476865/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3642187/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +Removing 'diversion of /bin/sh to /bin/sh.distrib by dash' +Adding 'diversion of /bin/sh to /bin/sh.distrib by bash' +Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash' +Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash' +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3642187/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3642187/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' - DISTRIBUTION='' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.1.4(1)-release' + BUILDDIR=/build + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16' + DIRSTACK=() + DISTRIBUTION= + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2476865' - PS1='# ' - PS2='> ' + INVOCATION_ID=305fa79c399f44e5b1824fbbb4e9af0f + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3642187 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.NgiJCkrLq2/pbuilderrc_jn3v --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.NgiJCkrLq2/b1 --logfile b1/build.log python-deeptools_3.5.0-1.dsc' - SUDO_GID='110' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/sbin/chroot' - http_proxy='http://78.137.99.97:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.NgiJCkrLq2/pbuilderrc_RUb0 --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.NgiJCkrLq2/b2 --logfile b2/build.log python-deeptools_3.5.0-1.dsc' + SUDO_GID=111 + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://85.184.249.68:3128 I: uname -a - Linux ionos1-amd64 5.10.0-11-amd64 #1 SMP Debian 5.10.92-1 (2022-01-18) x86_64 GNU/Linux + Linux i-capture-the-hostname 5.15.0-0.bpo.2-amd64 #1 SMP Debian 5.15.5-2~bpo11+1 (2022-01-02) x86_64 GNU/Linux I: ls -l /bin total 5476 - -rwxr-xr-x 1 root root 1234376 Aug 4 2021 bash - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff - -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep - -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep - -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep - -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 - -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover - lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore - -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore - -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp - -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod - -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown - -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp - -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash - -rwxr-xr-x 1 root root 113664 Sep 23 2020 date - -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd - -rwxr-xr-x 1 root root 93936 Sep 23 2020 df - -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir - -rwxr-xr-x 1 root root 84440 Jul 28 2021 dmesg - lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname - lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname - -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo - -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep - -rwxr-xr-x 1 root root 39680 Sep 23 2020 false - -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep - -rwxr-xr-x 1 root root 69032 Jul 28 2021 findmnt - -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount - -rwxr-xr-x 1 root root 203072 Nov 9 2020 grep - -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip - -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe - -rwxr-xr-x 1 root root 98048 Mar 2 2021 gzip - -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname - -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln - -rwxr-xr-x 1 root root 56952 Feb 7 2020 login - -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls - -rwxr-xr-x 1 root root 149736 Jul 28 2021 lsblk - -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir - -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod - -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp - -rwxr-xr-x 1 root root 59632 Jul 28 2021 more - -rwsr-xr-x 1 root root 55528 Jul 28 2021 mount - -rwxr-xr-x 1 root root 18664 Jul 28 2021 mountpoint - -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv - lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname - lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 - -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd - lrwxrwxrwx 1 root root 4 Aug 4 2021 rbash -> bash - -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink - -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm - -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir - -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts - -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed - lrwxrwxrwx 1 root root 4 Feb 6 21:25 sh -> dash - -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep - -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty - -rwsr-xr-x 1 root root 71912 Jul 28 2021 su - -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync - -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar - -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile - -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch - -rwxr-xr-x 1 root root 39680 Sep 23 2020 true - -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server - -rwsr-xr-x 1 root root 35040 Jul 28 2021 umount - -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname - -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress - -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir - -rwxr-xr-x 1 root root 63744 Jul 28 2021 wdctl - lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname - -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat - -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp - -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff - -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep - -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep - -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce - -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep - -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless - -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore - -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew -I: user script /srv/workspace/pbuilder/2476865/tmp/hooks/D02_print_environment finished + -rwxr-xr-x 1 root root 1234376 Aug 5 2021 bash + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bunzip2 + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzcat + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff + -rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep + -rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep + -rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep + -rwxr-xr-x 3 root root 38984 Jul 21 2020 bzip2 + -rwxr-xr-x 1 root root 18424 Jul 21 2020 bzip2recover + lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore + -rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore + -rwxr-xr-x 1 root root 43936 Sep 24 2020 cat + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chgrp + -rwxr-xr-x 1 root root 64448 Sep 24 2020 chmod + -rwxr-xr-x 1 root root 72672 Sep 24 2020 chown + -rwxr-xr-x 1 root root 151168 Sep 24 2020 cp + -rwxr-xr-x 1 root root 125560 Dec 11 2020 dash + -rwxr-xr-x 1 root root 113664 Sep 24 2020 date + -rwxr-xr-x 1 root root 80968 Sep 24 2020 dd + -rwxr-xr-x 1 root root 93936 Sep 24 2020 df + -rwxr-xr-x 1 root root 147176 Sep 24 2020 dir + -rwxr-xr-x 1 root root 84440 Jul 29 2021 dmesg + lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname + lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname + -rwxr-xr-x 1 root root 39712 Sep 24 2020 echo + -rwxr-xr-x 1 root root 28 Nov 10 2020 egrep + -rwxr-xr-x 1 root root 39680 Sep 24 2020 false + -rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep + -rwxr-xr-x 1 root root 69032 Jul 29 2021 findmnt + -rwsr-xr-x 1 root root 34896 Feb 27 2021 fusermount + -rwxr-xr-x 1 root root 203072 Nov 10 2020 grep + -rwxr-xr-x 2 root root 2346 Mar 3 2021 gunzip + -rwxr-xr-x 1 root root 6376 Mar 3 2021 gzexe + -rwxr-xr-x 1 root root 98048 Mar 3 2021 gzip + -rwxr-xr-x 1 root root 22600 Nov 8 2019 hostname + -rwxr-xr-x 1 root root 72840 Sep 24 2020 ln + -rwxr-xr-x 1 root root 56952 Feb 8 2020 login + -rwxr-xr-x 1 root root 147176 Sep 24 2020 ls + -rwxr-xr-x 1 root root 149736 Jul 29 2021 lsblk + -rwxr-xr-x 1 root root 85184 Sep 24 2020 mkdir + -rwxr-xr-x 1 root root 76896 Sep 24 2020 mknod + -rwxr-xr-x 1 root root 48064 Sep 24 2020 mktemp + -rwxr-xr-x 1 root root 59632 Jul 29 2021 more + -rwsr-xr-x 1 root root 55528 Jul 29 2021 mount + -rwxr-xr-x 1 root root 18664 Jul 29 2021 mountpoint + -rwxr-xr-x 1 root root 147080 Sep 24 2020 mv + lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname + lrwxrwxrwx 1 root root 14 Apr 19 2021 pidof -> /sbin/killall5 + -rwxr-xr-x 1 root root 43872 Sep 24 2020 pwd + lrwxrwxrwx 1 root root 4 Aug 5 2021 rbash -> bash + -rwxr-xr-x 1 root root 52032 Sep 24 2020 readlink + -rwxr-xr-x 1 root root 72704 Sep 24 2020 rm + -rwxr-xr-x 1 root root 52032 Sep 24 2020 rmdir + -rwxr-xr-x 1 root root 27472 Sep 28 2020 run-parts + -rwxr-xr-x 1 root root 122224 Dec 23 2018 sed + lrwxrwxrwx 1 root root 4 Mar 15 21:47 sh -> bash + lrwxrwxrwx 1 root root 4 Mar 13 05:46 sh.distrib -> dash + -rwxr-xr-x 1 root root 43808 Sep 24 2020 sleep + -rwxr-xr-x 1 root root 84928 Sep 24 2020 stty + -rwsr-xr-x 1 root root 71912 Jul 29 2021 su + -rwxr-xr-x 1 root root 39744 Sep 24 2020 sync + -rwxr-xr-x 1 root root 531928 Feb 17 2021 tar + -rwxr-xr-x 1 root root 14456 Sep 28 2020 tempfile + -rwxr-xr-x 1 root root 101408 Sep 24 2020 touch + -rwxr-xr-x 1 root root 39680 Sep 24 2020 true + -rwxr-xr-x 1 root root 14328 Feb 27 2021 ulockmgr_server + -rwsr-xr-x 1 root root 35040 Jul 29 2021 umount + -rwxr-xr-x 1 root root 39744 Sep 24 2020 uname + -rwxr-xr-x 2 root root 2346 Mar 3 2021 uncompress + -rwxr-xr-x 1 root root 147176 Sep 24 2020 vdir + -rwxr-xr-x 1 root root 63744 Jul 29 2021 wdctl + lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname + -rwxr-xr-x 1 root root 1984 Mar 3 2021 zcat + -rwxr-xr-x 1 root root 1678 Mar 3 2021 zcmp + -rwxr-xr-x 1 root root 5880 Mar 3 2021 zdiff + -rwxr-xr-x 1 root root 29 Mar 3 2021 zegrep + -rwxr-xr-x 1 root root 29 Mar 3 2021 zfgrep + -rwxr-xr-x 1 root root 2081 Mar 3 2021 zforce + -rwxr-xr-x 1 root root 7585 Mar 3 2021 zgrep + -rwxr-xr-x 1 root root 2206 Mar 3 2021 zless + -rwxr-xr-x 1 root root 1842 Mar 3 2021 zmore + -rwxr-xr-x 1 root root 4553 Mar 3 2021 znew +I: user script /srv/workspace/pbuilder/3642187/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -362,7 +396,7 @@ Get: 140 http://deb.debian.org/debian bullseye/main amd64 python3-pybigwig amd64 0.3.17-1+b4 [35.8 kB] Get: 141 http://deb.debian.org/debian bullseye/main amd64 python3-pysam amd64 0.15.4+ds-3+b2 [1536 kB] Get: 142 http://deb.debian.org/debian bullseye/main amd64 python3-scipy amd64 1.6.0-2 [12.3 MB] -Fetched 72.5 MB in 1s (59.5 MB/s) +Fetched 72.5 MB in 1s (87.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) @@ -973,7 +1007,8 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/python-deeptools-3.5.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-deeptools_3.5.0-1_source.changes +hostname: Name or service not known +I: Running cd /build/python-deeptools-3.5.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-deeptools_3.5.0-1_source.changes dpkg-buildpackage: info: source package python-deeptools dpkg-buildpackage: info: source version 3.5.0-1 dpkg-buildpackage: info: source distribution unstable @@ -2261,110 +2296,110 @@ deeptools.test.test_plotCoverage.test_plotCoverage_default ... ok Minimal testing ... ok --minMappingQuality 10 --samFlagExclude 512 --ignoreDuplicates -bl ... ok -Test alignmentSieve with the --BED option ... [E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_9je26u1l.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_k50b7jr7.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_dh8_rl8_.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_d182vsml.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_nigzlg9w.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_p8g4dfnb.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rxezhlf3.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_f8htz5wx.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_561u06zw.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools__qjbs_bv.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_mxcpwrnl.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_meg2uqfh.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_scneuqeg.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_6f1rb2g6.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ahtjoyhp.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_z4nllytf.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_hsbss4kp.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_n6m7ztmg.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_w757q1ny.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_pa2cy5jv.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_fc6jvz07.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_d6b068rd.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_y4f9jbxr.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_c9mficmh.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ygx127_l.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_zkw8vcx6.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_kxhw0fcq.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_9x3ekiuk.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_gcsxqz4t.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ygx_034s.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_pzhgbb4d.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_952_mwsz.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools__akdnhp2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_3hi6hi08.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_nlpmlpv_.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_45c87a51.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ppt9x_7l.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_gxy3ko4d.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_88irbcr7.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ceolufwe.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_y11l6tsn.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_axr1rvji.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_kl1j8ghj.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_tj840ty_.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools__k0x8w33.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_v7o61q0y.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_j17dz7kf.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_jf_w5oo2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rsnwdgm7.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools__rmojdj6.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_v1f3uiyf.bam' +Test alignmentSieve with the --BED option ... [E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_y6u3css8.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_o8474oj7.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_60syclso.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_qx3da0f4.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ztmco3uw.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ml1jixsy.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_7rsmjff3.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_uyaetit3.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_wgfo51pw.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_bmr5v3rq.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_samgulwx.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_xm9o_6bv.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_csklys5c.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_8owse3wa.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_u2zzypo2.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_r11bylep.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_4h5_uurv.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_z_afuey2.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_paf_0rs2.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_97dvof2d.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_yzzdky24.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_v_f8pmp2.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_9_p7vp3y.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_hxz37n94.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools__rh2c7eh.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_zp7gobt5.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_f7maql4a.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_jna1m3zr.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_oqp0tl86.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_b0vimxbb.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_onw6iiks.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_8piupmj1.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_6my3tu60.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_aebiywuj.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_he7ps1vk.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ejrpidqt.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_k0svidgt.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_20bpfgc6.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_vr392bon.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_398lhf9c.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_l551qfbc.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_cvhy3od7.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ejlpjevi.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_quikkami.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_vzefb7ia.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_up6scv7s.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_eewqo396.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rwvoq6h8.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_1aqdhdrd.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_22s4lwib.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_iydw07rc.bam' ok Test filtering a BAM file by MAPQ, flag, and blacklist ... SKIP: Skip this test (see )https://github.com/deeptools/deepTools/issues/903 -Test alignmentSieve --BED --shift ... [E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_lttn1bkf.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools__hv3p674.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_li__akx1.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ti_fcf_g.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_5s09513p.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_qhkuvsot.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_58oecwkh.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_eapwgxcy.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_vy3qbxgj.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_lregf_tf.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_bvkjq0wm.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_z23qlgkx.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_la9cwyy2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_9g3wz7tj.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_1oxvg7sa.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools__ehn3jc3.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_74uqp61j.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_yi_8q5us.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_t0p2q5ih.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_heciihn2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_34qfgakk.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_s_w_123w.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_p8paxara.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_o1qd2au2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_9b7boot2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_btdz438m.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_u3gy9zhf.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_uioezakm.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_17m69rch.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_f5fv2h9z.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_75360w9n.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_b38i2_uk.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_3j_af5dt.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_a1lz0qf6.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_nbxpnngc.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_2_tz4k4b.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_vpmosyqn.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_7ev45kmf.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_mlabdawr.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_7i_51ui5.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_dgdzkatj.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_zdlaemt2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_n3dj3214.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_8fz0fydp.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_yk1gabbu.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_byp74qse.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_2uxqkqnz.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rnb9aeqm.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_q91k4lxr.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_nj7ppav2.bam' -[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rf2vmih_.bam' +Test alignmentSieve --BED --shift ... [E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_hwtl433o.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_f45qj5dk.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_s2hdi49m.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_7rc7keyh.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_cxaatfgz.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_bnpy798g.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_kiw_yhoj.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_hrb_5w3m.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_5dy6ivl8.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_gfnniv68.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rml2l1to.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_g9wmq6eq.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_43uvhsrl.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_scwaf_um.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_wfyztuho.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_imfsllm5.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_88y_dxak.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_svr9pve9.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rjzhsld7.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_gghdmjl5.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_61_8md8j.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_94mfbzvi.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_f8tbyrcr.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_fsu2zoe6.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_utas6nj_.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rkpee_q9.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_hqq933q3.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_oo8o27dt.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_pl3ye3no.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_03ezkwh6.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_wydjnl_h.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_9ivtyg3u.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_945rigib.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_7plizp2k.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_8xw4oy8q.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_vsjf35w5.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_o4tcf26t.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_l442hl5p.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_2mp7y41t.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_qx1uuodj.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_f_3v9f55.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_oxeabvne.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_pfte3i_e.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_ion0er35.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_sbffwa_3.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_sk19tvt1.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_pf_lmvjb.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rh399l6r.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_7glwyr3k.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_wp1exj06.bam' +[E::idx_find_and_load] Could not retrieve index file for '/tmp/_deeptools_rkov6sxe.bam' ok Checks everything that is in /bin/ ... plotProfile 3.5.0 plotPCA 3.5.0 @@ -2414,13 +2449,13 @@ deeptools.test.testskip_heatmapper_images.test_plotProfiler_multibigwig_pergroup ... ok ---------------------------------------------------------------------- -Ran 108 tests in 18.022s +Ran 108 tests in 18.048s OK (SKIP=1) -MainProcess, processing 3 (11501.7 per sec) reads @ 3R:0-200 -MainProcess countReadsInRegions_worker: processing 4 (8464.8 per sec) @ 3R:0-200 -MainProcess, processing 3 (9701.6 per sec) reads @ 3R:0-200 -MainProcess countReadsInRegions_worker: processing 4 (7070.0 per sec) @ 3R:0-200 +MainProcess, processing 3 (19569.1 per sec) reads @ 3R:0-200 +MainProcess countReadsInRegions_worker: processing 4 (13785.7 per sec) @ 3R:0-200 +MainProcess, processing 3 (15105.5 per sec) reads @ 3R:0-200 +MainProcess countReadsInRegions_worker: processing 4 (11831.6 per sec) @ 3R:0-200 Due to filtering, 50.0% of the aforementioned alignments will be used 1.0 Due to filtering, 50.0% of the aforementioned alignments will be used 1.0 There are 193 alignments, of which 7 are completely within a blacklist region. @@ -2677,7 +2712,7 @@ D: dh_python3 pydist:142: trying to find dependency for pyBigWig>=0.2.1 (python=None) D: dh_python3 pydist:142: trying to find dependency for pysam>=0.14.0 (python=None) D: dh_python3 pydist:142: trying to find dependency for scipy>=0.17.0 (python=None) -D: dh_python3 depends:275: D={'python3:any', 'python3-numpy', 'python3-plotly (>=2.0.0)', 'python3-pybigwig', 'python3-pysam (>=0.14.0)', 'python3-deeptoolsintervals', 'python3-scipy (>=0.17.0)', 'python3-numpydoc', 'python3-matplotlib (>=2.1.2)', 'python3-py2bit'}; R=[]; S=[]; E=[], B=[]; RT=[] +D: dh_python3 depends:275: D={'python3-numpy', 'python3-matplotlib (>=2.1.2)', 'python3-pysam (>=0.14.0)', 'python3-pybigwig', 'python3-py2bit', 'python3-plotly (>=2.0.0)', 'python3-numpydoc', 'python3-scipy (>=0.17.0)', 'python3-deeptoolsintervals', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild @@ -2722,12 +2757,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3642187/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3642187/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2476865 and its subdirectories -I: Current time: Wed Feb 9 13:24:18 -12 2022 -I: pbuilder-time-stamp: 1644456258 +I: removing directory /srv/workspace/pbuilder/3642187 and its subdirectories +I: Current time: Wed Mar 15 21:48:50 +14 2023 +I: pbuilder-time-stamp: 1678866530